Query 002174
Match_columns 956
No_of_seqs 921 out of 7130
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 15:31:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002174.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002174hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 1.1E-52 3.8E-57 457.2 17.2 262 624-903 13-292 (299)
2 4aoj_A High affinity nerve gro 100.0 4.6E-52 1.6E-56 458.6 20.9 262 624-903 41-322 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 5.2E-52 1.8E-56 453.9 16.0 257 625-899 27-305 (308)
4 4fih_A Serine/threonine-protei 100.0 6.8E-52 2.3E-56 456.4 16.4 264 624-947 74-338 (346)
5 3omv_A RAF proto-oncogene seri 100.0 5.9E-51 2E-55 443.5 21.9 267 621-904 33-304 (307)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.9E-51 9.9E-56 444.6 14.7 256 624-939 32-297 (311)
7 4fie_A Serine/threonine-protei 100.0 1E-50 3.6E-55 457.8 18.6 265 623-947 150-415 (423)
8 4b9d_A Serine/threonine-protei 100.0 2.2E-50 7.4E-55 445.1 15.7 250 624-893 24-276 (350)
9 4g3f_A NF-kappa-beta-inducing 100.0 5.1E-50 1.8E-54 440.2 18.3 254 624-899 58-315 (336)
10 3hyh_A Carbon catabolite-derep 100.0 1.3E-50 4.4E-55 433.8 13.0 254 624-941 13-271 (275)
11 3fpq_A Serine/threonine-protei 100.0 8.7E-50 3E-54 431.2 18.3 253 627-939 29-289 (290)
12 4ase_A Vascular endothelial gr 100.0 1.4E-49 4.6E-54 442.4 18.0 271 614-901 54-348 (353)
13 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-50 4.4E-55 439.7 6.7 200 624-835 24-229 (304)
14 4f9c_A Cell division cycle 7-r 100.0 1.5E-48 5.2E-53 437.0 14.6 303 621-938 18-358 (361)
15 4b99_A Mitogen-activated prote 100.0 3.4E-48 1.2E-52 438.7 14.6 287 624-939 54-351 (398)
16 3hmm_A TGF-beta receptor type- 100.0 2.1E-47 7.2E-52 418.5 17.6 265 624-900 3-297 (303)
17 4g31_A Eukaryotic translation 100.0 1E-47 3.4E-52 418.9 14.9 262 624-939 5-286 (299)
18 3uto_A Twitchin; kinase, muscl 100.0 6.3E-45 2.1E-49 432.3 17.6 260 623-940 156-418 (573)
19 3v5w_A G-protein coupled recep 100.0 6E-45 2E-49 428.3 15.9 198 623-834 188-393 (689)
20 3fxz_A Serine/threonine-protei 100.0 9.2E-42 3.1E-46 374.3 21.8 261 623-943 19-280 (297)
21 3uim_A Brassinosteroid insensi 100.0 5.5E-42 1.9E-46 381.4 20.1 285 607-897 13-308 (326)
22 3fe3_A MAP/microtubule affinit 100.0 3.4E-42 1.2E-46 382.6 17.9 256 623-941 14-273 (328)
23 2qkw_B Protein kinase; three-h 100.0 9.5E-42 3.2E-46 378.7 20.7 278 616-901 31-316 (321)
24 3niz_A Rhodanese family protei 100.0 4.8E-42 1.6E-46 379.1 15.6 276 623-939 20-307 (311)
25 4aw2_A Serine/threonine-protei 100.0 3.5E-42 1.2E-46 395.9 12.0 270 614-939 64-345 (437)
26 3zgw_A Maternal embryonic leuc 100.0 4.5E-42 1.5E-46 383.9 12.0 204 622-836 8-214 (347)
27 2yab_A Death-associated protei 100.0 4.1E-41 1.4E-45 378.5 19.2 257 623-938 11-278 (361)
28 2c30_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 372.9 19.4 270 612-941 23-303 (321)
29 1ogq_A PGIP-2, polygalacturona 100.0 1.7E-41 5.9E-46 374.8 15.8 295 31-332 2-302 (313)
30 3o0g_A Cell division protein k 100.0 6.5E-42 2.2E-46 374.6 12.1 276 624-939 2-289 (292)
31 2psq_A Fibroblast growth facto 100.0 6E-41 2E-45 379.4 20.4 262 623-902 80-366 (370)
32 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-41 3.4E-46 382.5 12.7 203 622-836 21-228 (353)
33 1o6l_A RAC-beta serine/threoni 100.0 2.7E-41 9.4E-46 376.4 15.7 241 623-886 4-248 (337)
34 3gni_B Strad alpha; kinase fol 100.0 2.5E-41 8.5E-46 385.8 15.6 307 623-941 24-342 (389)
35 3llt_A Serine/threonine kinase 100.0 1.8E-41 6.1E-46 382.8 14.0 301 610-937 21-360 (360)
36 1ob3_A PFPK5, cell division co 100.0 1.4E-41 4.8E-46 371.2 12.1 275 624-939 2-287 (288)
37 3v8s_A RHO-associated protein 100.0 2.4E-41 8.1E-46 386.0 14.0 209 616-836 61-277 (410)
38 3kul_A Ephrin type-A receptor 100.0 1.2E-40 4.3E-45 370.2 19.4 264 623-904 48-317 (325)
39 4dc2_A Protein kinase C IOTA t 100.0 2.3E-41 7.8E-46 384.0 13.6 200 623-834 51-255 (396)
40 2nru_A Interleukin-1 receptor- 100.0 2E-39 6.8E-44 357.5 28.4 280 610-899 11-305 (307)
41 3p86_A Serine/threonine-protei 100.0 1.2E-40 4.2E-45 367.4 18.4 267 617-901 30-299 (309)
42 1fot_A TPK1 delta, CAMP-depend 100.0 4.3E-41 1.5E-45 372.1 14.6 199 623-836 5-207 (318)
43 1tki_A Titin; serine kinase, m 100.0 3.9E-41 1.3E-45 373.3 14.3 260 623-941 4-266 (321)
44 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-41 1.1E-45 373.5 13.0 290 623-941 4-302 (317)
45 3oz6_A Mitogen-activated prote 100.0 9.2E-41 3.1E-45 380.9 16.7 305 622-939 7-335 (388)
46 1xjd_A Protein kinase C, theta 100.0 7.7E-41 2.6E-45 373.9 15.7 203 621-835 14-221 (345)
47 3a8x_A Protein kinase C IOTA t 100.0 8.9E-41 3E-45 373.9 15.6 199 624-834 9-212 (345)
48 1kob_A Twitchin; kinase, intra 100.0 2E-40 7E-45 376.2 18.7 260 623-941 50-313 (387)
49 3rgz_A Protein brassinosteroid 100.0 2.3E-40 8E-45 410.5 20.9 335 32-385 9-381 (768)
50 3g33_A Cell division protein k 100.0 1.5E-40 5.2E-45 366.7 17.2 283 621-941 6-305 (308)
51 3ttj_A Mitogen-activated prote 100.0 3.8E-41 1.3E-45 391.8 12.6 284 623-938 61-361 (464)
52 3s95_A LIMK-1, LIM domain kina 100.0 2.5E-40 8.4E-45 365.4 18.0 268 623-902 9-284 (310)
53 2y0a_A Death-associated protei 100.0 1.5E-40 5.3E-45 369.6 16.2 258 623-939 10-278 (326)
54 3tki_A Serine/threonine-protei 100.0 7.4E-41 2.5E-45 371.6 13.0 203 624-836 7-212 (323)
55 3qup_A Tyrosine-protein kinase 100.0 9.6E-41 3.3E-45 370.9 13.8 265 618-900 17-298 (323)
56 2vd5_A DMPK protein; serine/th 100.0 1.1E-40 3.8E-45 380.8 14.5 213 614-836 51-274 (412)
57 4hcu_A Tyrosine-protein kinase 100.0 3.4E-40 1.2E-44 356.4 17.5 258 622-900 8-266 (269)
58 3ugc_A Tyrosine-protein kinase 100.0 2.2E-40 7.7E-45 362.9 16.1 270 623-902 9-293 (295)
59 3vhe_A Vascular endothelial gr 100.0 2.4E-40 8.3E-45 373.3 16.8 271 613-900 11-355 (359)
60 2bdw_A Hypothetical protein K1 100.0 1.9E-40 6.4E-45 374.0 15.8 258 622-938 27-290 (362)
61 3cbl_A C-FES, proto-oncogene t 100.0 1.5E-40 5.2E-45 377.3 15.1 265 618-901 108-375 (377)
62 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.6E-40 1.2E-44 355.9 17.3 258 622-900 6-264 (268)
63 3c0i_A Peripheral plasma membr 100.0 9.2E-41 3.1E-45 375.3 13.1 203 623-835 23-236 (351)
64 3soa_A Calcium/calmodulin-depe 100.0 2.6E-40 8.9E-45 381.7 16.9 259 622-938 9-273 (444)
65 1qcf_A Haematopoetic cell kina 100.0 6.5E-41 2.2E-45 389.8 12.0 265 616-901 180-445 (454)
66 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.9E-40 6.5E-45 371.8 15.0 198 624-836 41-242 (350)
67 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.2E-40 4.2E-45 370.7 13.1 254 624-941 9-267 (336)
68 3rp9_A Mitogen-activated prote 100.0 1.1E-40 3.7E-45 389.0 12.9 296 623-939 52-403 (458)
69 2x4f_A Myosin light chain kina 100.0 1.2E-40 4.1E-45 377.0 12.9 253 629-939 94-349 (373)
70 2qol_A Ephrin receptor; recept 100.0 4.6E-40 1.6E-44 372.4 17.6 261 623-901 44-310 (373)
71 1k9a_A Carboxyl-terminal SRC k 100.0 9E-40 3.1E-44 379.6 20.3 257 619-901 188-446 (450)
72 3a62_A Ribosomal protein S6 ki 100.0 1.1E-40 3.7E-45 371.0 11.9 202 623-836 16-225 (327)
73 3kn6_A Ribosomal protein S6 ki 100.0 5.6E-40 1.9E-44 364.8 17.6 260 629-942 16-280 (325)
74 4fr4_A YANK1, serine/threonine 100.0 2.2E-40 7.6E-45 374.6 14.4 242 623-887 14-264 (384)
75 4ecn_A Leucine-rich repeat pro 100.0 7.6E-40 2.6E-44 403.4 20.3 336 28-385 262-741 (876)
76 1luf_A Muscle-specific tyrosin 100.0 3.2E-40 1.1E-44 369.8 15.5 265 619-901 42-336 (343)
77 3mtl_A Cell division protein k 100.0 1.2E-40 4.3E-45 370.1 11.7 288 624-945 2-294 (324)
78 3soc_A Activin receptor type-2 100.0 6.7E-40 2.3E-44 363.9 17.5 268 621-901 21-319 (322)
79 2w4o_A Calcium/calmodulin-depe 100.0 2.6E-40 9E-45 371.2 14.3 260 622-941 51-314 (349)
80 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.3E-40 7.9E-45 384.8 14.2 264 617-901 177-441 (452)
81 3tt0_A Basic fibroblast growth 100.0 1.5E-39 5.1E-44 370.0 20.6 266 621-904 66-356 (382)
82 2acx_A G protein-coupled recep 100.0 2.5E-40 8.4E-45 389.3 14.5 203 622-835 182-388 (576)
83 2i0e_A Protein kinase C-beta I 100.0 3.5E-40 1.2E-44 369.7 14.8 203 622-836 18-225 (353)
84 2ivs_A Proto-oncogene tyrosine 100.0 6.7E-40 2.3E-44 362.4 16.8 263 620-900 19-311 (314)
85 4eco_A Uncharacterized protein 100.0 5.5E-40 1.9E-44 398.0 17.5 339 30-385 25-501 (636)
86 3lb7_A RAF proto-oncogene seri 100.0 3.1E-39 1.1E-43 355.9 21.7 267 621-904 33-304 (307)
87 2zv2_A Calcium/calmodulin-depe 100.0 5.6E-40 1.9E-44 360.4 15.6 254 623-937 12-297 (298)
88 4eqm_A Protein kinase; transfe 100.0 1.4E-39 4.7E-44 356.5 18.6 260 623-899 10-274 (294)
89 3uc3_A Serine/threonine-protei 100.0 2.9E-40 9.8E-45 372.5 13.1 198 623-834 19-220 (361)
90 3gen_A Tyrosine-protein kinase 100.0 4.3E-40 1.5E-44 358.4 14.0 262 618-900 18-280 (283)
91 2ac3_A MAP kinase-interacting 100.0 5.2E-40 1.8E-44 363.7 14.8 283 623-941 11-304 (316)
92 3f3z_A Calcium/calmodulin-depe 100.0 6.8E-40 2.3E-44 355.6 15.2 259 623-941 8-270 (277)
93 3l9p_A Anaplastic lymphoma kin 100.0 5E-40 1.7E-44 371.6 14.7 260 623-900 70-345 (367)
94 2eue_A Carbon catabolite derep 100.0 5.7E-40 2E-44 355.8 14.6 254 624-941 13-271 (275)
95 1opk_A P150, C-ABL, proto-onco 100.0 3.3E-40 1.1E-44 387.6 13.7 262 618-899 214-477 (495)
96 3p1a_A MYT1 kinase, membrane-a 100.0 8.8E-40 3E-44 361.1 15.9 251 623-938 56-310 (311)
97 4agu_A Cyclin-dependent kinase 100.0 9.3E-40 3.2E-44 360.8 15.9 285 624-941 3-293 (311)
98 2eva_A TAK1 kinase - TAB1 chim 100.0 6.3E-39 2.2E-43 353.5 22.1 262 623-907 7-270 (307)
99 1qpc_A LCK kinase; alpha beta 100.0 8.5E-40 2.9E-44 355.2 14.9 265 618-903 7-272 (279)
100 3kfa_A Tyrosine-protein kinase 100.0 9.9E-40 3.4E-44 356.3 15.4 265 617-901 6-272 (288)
101 3poz_A Epidermal growth factor 100.0 1E-39 3.6E-44 363.2 15.8 258 623-900 14-278 (327)
102 4ejn_A RAC-alpha serine/threon 100.0 2E-40 6.8E-45 385.1 10.4 202 623-836 147-353 (446)
103 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.3E-40 4.6E-45 370.7 8.3 285 622-940 32-326 (329)
104 3kmu_A ILK, integrin-linked ki 100.0 4.2E-39 1.4E-43 347.8 19.6 254 623-899 9-269 (271)
105 3kvw_A DYRK2, dual specificity 100.0 1.1E-39 3.6E-44 376.4 15.9 285 623-941 96-417 (429)
106 1mp8_A Focal adhesion kinase 1 100.0 1.3E-39 4.5E-44 354.2 15.6 259 621-900 12-276 (281)
107 2a2a_A Death-associated protei 100.0 1.8E-39 6E-44 360.4 16.9 258 623-939 11-279 (321)
108 1cm8_A Phosphorylated MAP kina 100.0 4E-40 1.4E-44 372.2 11.9 276 623-940 24-315 (367)
109 1rjb_A FL cytokine receptor; k 100.0 2.7E-39 9.4E-44 362.5 18.6 268 618-902 39-336 (344)
110 3n9x_A Phosphotransferase; mal 100.0 7.6E-40 2.6E-44 378.3 14.5 205 623-833 25-253 (432)
111 1t46_A HOMO sapiens V-KIT hard 100.0 4.9E-39 1.7E-43 355.2 20.2 266 620-902 19-309 (313)
112 3nsz_A CK II alpha, casein kin 100.0 3.9E-39 1.3E-43 359.0 19.1 280 623-940 35-327 (330)
113 3mi9_A Cell division protein k 100.0 1.6E-39 5.4E-44 365.5 15.9 295 623-944 16-323 (351)
114 3dtc_A Mitogen-activated prote 100.0 4.2E-39 1.4E-43 348.1 18.5 253 623-897 6-270 (271)
115 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.3E-39 4.4E-44 382.5 15.5 203 623-835 184-392 (543)
116 3kk8_A Calcium/calmodulin depe 100.0 3.9E-39 1.4E-43 350.8 18.1 260 623-941 5-270 (284)
117 3lm5_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 361.3 15.3 273 612-941 16-296 (327)
118 3t9t_A Tyrosine-protein kinase 100.0 1.9E-39 6.3E-44 350.0 14.9 258 622-900 6-264 (267)
119 2izr_A Casein kinase I isoform 100.0 6.9E-39 2.4E-43 357.1 19.7 270 623-905 8-286 (330)
120 1mqb_A Ephrin type-A receptor 100.0 8E-39 2.7E-43 356.9 20.1 277 623-925 43-326 (333)
121 1csn_A Casein kinase-1; phosph 100.0 6.4E-39 2.2E-43 351.7 18.9 270 623-904 9-287 (298)
122 2y94_A 5'-AMP-activated protei 100.0 8.1E-40 2.8E-44 380.0 12.4 200 624-836 16-220 (476)
123 3eqc_A Dual specificity mitoge 100.0 6.5E-40 2.2E-44 370.0 11.2 295 623-940 32-332 (360)
124 2r3i_A Cell division protein k 100.0 9.8E-40 3.4E-44 358.4 12.1 286 624-941 3-292 (299)
125 2rku_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 348.4 21.3 257 623-941 14-274 (294)
126 3op5_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 364.9 16.5 278 622-907 33-336 (364)
127 1ua2_A CAK, cell division prot 100.0 7.7E-40 2.6E-44 367.2 11.3 285 622-940 8-299 (346)
128 2pvf_A Fibroblast growth facto 100.0 6.7E-39 2.3E-43 357.8 18.7 265 621-903 32-321 (334)
129 3is5_A Calcium-dependent prote 100.0 2E-39 6.8E-44 353.6 14.0 257 623-938 21-284 (285)
130 2xir_A Vascular endothelial gr 100.0 5.6E-39 1.9E-43 355.3 17.7 271 614-901 17-311 (316)
131 2r5t_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 368.9 11.5 248 623-893 37-289 (373)
132 2h8h_A Proto-oncogene tyrosine 100.0 6.9E-40 2.4E-44 388.4 10.9 264 616-900 259-523 (535)
133 1nxk_A MAP kinase-activated pr 100.0 1.8E-39 6.2E-44 370.9 13.9 196 624-835 61-266 (400)
134 2xrw_A Mitogen-activated prote 100.0 3.4E-39 1.2E-43 365.5 16.0 285 623-939 24-325 (371)
135 2fst_X Mitogen-activated prote 100.0 5.1E-40 1.7E-44 371.0 9.1 277 623-940 28-319 (367)
136 3rgf_A Cyclin-dependent kinase 100.0 1.1E-39 3.7E-44 374.2 11.9 295 624-941 20-342 (405)
137 2i1m_A Macrophage colony-stimu 100.0 4.1E-39 1.4E-43 359.4 16.0 266 618-900 40-326 (333)
138 3pg1_A Mitogen-activated prote 100.0 2.7E-39 9.4E-44 365.2 14.7 291 615-941 13-325 (362)
139 2qr7_A Ribosomal protein S6 ki 100.0 1.4E-39 4.8E-44 363.8 12.1 257 622-938 20-283 (342)
140 4euu_A Serine/threonine-protei 100.0 1.7E-38 5.8E-43 352.2 20.7 265 623-898 8-307 (319)
141 3v47_A TOLL-like receptor 5B a 100.0 9.1E-39 3.1E-43 372.6 19.4 334 61-400 6-424 (455)
142 3q4u_A Activin receptor type-1 100.0 6.7E-39 2.3E-43 352.1 17.2 256 623-898 7-300 (301)
143 4aaa_A Cyclin-dependent kinase 100.0 2.1E-39 7.1E-44 361.5 13.2 285 623-940 24-314 (331)
144 3cok_A Serine/threonine-protei 100.0 6.1E-39 2.1E-43 348.2 16.3 257 624-941 11-271 (278)
145 3brb_A Proto-oncogene tyrosine 100.0 5E-39 1.7E-43 355.4 15.7 270 617-904 27-312 (313)
146 3eb0_A Putative uncharacterize 100.0 2.3E-39 7.9E-44 368.6 13.3 281 620-938 3-327 (383)
147 1x8b_A WEE1HU, WEE1-like prote 100.0 4.1E-39 1.4E-43 351.1 14.6 252 623-940 10-287 (289)
148 2owb_A Serine/threonine-protei 100.0 2E-38 6.7E-43 354.1 20.2 202 623-836 40-245 (335)
149 3f66_A Hepatocyte growth facto 100.0 2.3E-38 7.7E-43 347.5 20.0 264 624-903 25-294 (298)
150 1p4o_A Insulin-like growth fac 100.0 2.5E-39 8.6E-44 359.2 12.5 268 614-899 15-298 (322)
151 3lxl_A Tyrosine-protein kinase 100.0 6.9E-39 2.4E-43 356.6 15.6 273 623-903 22-306 (327)
152 3lxp_A Non-receptor tyrosine-p 100.0 1.4E-38 4.8E-43 352.6 17.9 271 624-904 30-314 (318)
153 3c1x_A Hepatocyte growth facto 100.0 8.3E-39 2.8E-43 361.7 16.4 264 625-905 90-360 (373)
154 4fvq_A Tyrosine-protein kinase 100.0 5.6E-39 1.9E-43 350.6 14.2 252 623-900 7-275 (289)
155 2jam_A Calcium/calmodulin-depe 100.0 4.6E-39 1.6E-43 354.1 13.6 200 623-836 8-211 (304)
156 2jii_A Serine/threonine-protei 100.0 4.9E-39 1.7E-43 361.7 13.9 270 623-903 41-339 (352)
157 3i6u_A CDS1, serine/threonine- 100.0 2.3E-39 8E-44 372.5 11.5 260 621-939 132-406 (419)
158 4e5w_A Tyrosine-protein kinase 100.0 1.1E-38 3.8E-43 350.5 16.4 269 623-899 20-301 (302)
159 4f0f_A Serine/threonine-protei 100.0 3.4E-38 1.2E-42 344.1 20.1 254 623-897 18-286 (287)
160 3og7_A AKAP9-BRAF fusion prote 100.0 2.2E-38 7.5E-43 346.0 18.6 262 621-899 21-287 (289)
161 3ork_A Serine/threonine protei 100.0 1.3E-38 4.5E-43 351.7 16.9 260 623-898 11-279 (311)
162 1wak_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 368.3 13.3 198 623-835 36-296 (397)
163 2ozo_A Tyrosine-protein kinase 100.0 1.6E-38 5.3E-43 382.2 18.9 260 625-903 336-601 (613)
164 3qyz_A Mitogen-activated prote 100.0 4.5E-39 1.5E-43 363.7 13.3 286 623-940 26-321 (364)
165 3cc6_A Protein tyrosine kinase 100.0 2.6E-38 8.8E-43 343.9 18.7 259 622-901 10-274 (281)
166 2yex_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 347.1 14.3 262 623-941 6-270 (276)
167 3kex_A Receptor tyrosine-prote 100.0 4.5E-39 1.5E-43 357.8 12.9 258 623-900 12-276 (325)
168 2vx3_A Dual specificity tyrosi 100.0 2E-38 6.8E-43 360.7 18.5 202 621-837 51-263 (382)
169 1z57_A Dual specificity protei 100.0 2.5E-38 8.4E-43 353.5 18.8 289 623-939 13-335 (339)
170 2y7j_A Phosphorylase B kinase 100.0 1.4E-38 4.8E-43 359.4 16.9 263 616-937 86-364 (365)
171 1u59_A Tyrosine-protein kinase 100.0 2.8E-38 9.6E-43 344.8 18.7 260 623-901 8-273 (287)
172 3pfq_A PKC-B, PKC-beta, protei 100.0 6.2E-39 2.1E-43 389.2 14.4 203 622-836 339-546 (674)
173 1xbb_A Tyrosine-protein kinase 100.0 1.5E-38 5E-43 347.8 15.8 262 621-902 13-281 (291)
174 1byg_A CSK, protein (C-termina 100.0 1.1E-38 3.8E-43 346.2 14.7 254 622-901 19-274 (278)
175 1t4h_A Serine/threonine-protei 100.0 2.9E-38 9.8E-43 345.3 17.9 255 624-939 26-289 (290)
176 3qd2_B Eukaryotic translation 100.0 1.7E-38 5.8E-43 353.8 16.3 207 623-832 5-276 (332)
177 2id5_A Lingo-1, leucine rich r 100.0 7.2E-38 2.5E-42 367.3 21.9 330 62-398 6-346 (477)
178 3pls_A Macrophage-stimulating 100.0 7.3E-38 2.5E-42 343.2 20.5 264 625-904 22-291 (298)
179 4e7w_A Glycogen synthase kinas 100.0 9.6E-39 3.3E-43 364.5 13.9 281 623-941 39-330 (394)
180 2a19_B Interferon-induced, dou 100.0 1.5E-38 5.1E-43 346.1 14.7 251 622-902 9-276 (284)
181 1j1b_A Glycogen synthase kinas 100.0 7.8E-39 2.7E-43 368.3 12.9 277 624-938 54-342 (420)
182 1vzo_A Ribosomal protein S6 ki 100.0 3.1E-39 1.1E-43 363.5 9.3 201 623-834 53-264 (355)
183 3dbq_A Dual specificity protei 100.0 3.8E-38 1.3E-42 353.0 18.0 251 623-894 8-274 (343)
184 4exu_A Mitogen-activated prote 100.0 1.1E-38 3.9E-43 361.2 13.8 278 623-939 41-330 (371)
185 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-38 6E-43 374.6 15.8 259 622-940 34-309 (504)
186 3lzb_A Epidermal growth factor 100.0 3.2E-38 1.1E-42 351.1 16.7 258 623-900 14-278 (327)
187 3lij_A Calcium/calmodulin depe 100.0 1.3E-38 4.4E-43 374.7 14.3 256 623-938 36-297 (494)
188 2j7t_A Serine/threonine-protei 100.0 2.4E-38 8.2E-43 347.9 15.4 259 623-941 18-284 (302)
189 3byv_A Rhoptry kinase; malaria 100.0 7.2E-40 2.5E-44 371.9 3.2 197 623-834 72-315 (377)
190 3hko_A Calcium/calmodulin-depe 100.0 5.1E-38 1.7E-42 352.3 18.1 214 618-837 20-281 (345)
191 3mdy_A Bone morphogenetic prot 100.0 1.3E-37 4.5E-42 347.6 21.3 264 618-901 31-332 (337)
192 2i6l_A Mitogen-activated prote 100.0 9.3E-39 3.2E-43 354.0 11.8 286 623-940 10-313 (320)
193 3fdn_A Serine/threonine-protei 100.0 5.6E-38 1.9E-42 340.9 17.7 200 623-836 8-211 (279)
194 3nyv_A Calmodulin-domain prote 100.0 6.6E-39 2.2E-43 376.6 11.2 258 623-940 25-289 (484)
195 2w1i_A JAK2; chromosomal rearr 100.0 3E-38 1E-42 351.3 15.9 269 623-901 40-323 (326)
196 1blx_A Cyclin-dependent kinase 100.0 2.5E-38 8.5E-43 351.8 15.0 291 622-948 9-312 (326)
197 1phk_A Phosphorylase kinase; g 100.0 4.6E-38 1.6E-42 344.9 16.9 259 623-940 16-291 (298)
198 2wqm_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 344.2 19.8 261 624-902 32-299 (310)
199 2yfx_A Tyrosine-protein kinase 100.0 4.1E-38 1.4E-42 350.4 16.5 261 622-900 28-304 (327)
200 2v62_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 356.8 12.8 268 623-899 36-327 (345)
201 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.9E-38 2.7E-42 353.7 19.0 270 621-919 62-355 (365)
202 3g2f_A Bone morphogenetic prot 100.0 1.1E-37 3.8E-42 348.1 19.7 269 623-905 12-323 (336)
203 2b9h_A MAP kinase FUS3, mitoge 100.0 4.8E-38 1.6E-42 353.7 16.8 294 623-941 10-314 (353)
204 2pml_X PFPK7, Ser/Thr protein 100.0 1.3E-38 4.6E-43 357.5 11.7 275 623-940 30-330 (348)
205 3mwu_A Calmodulin-domain prote 100.0 1.2E-38 4E-43 374.4 11.7 260 622-941 20-285 (486)
206 3e3p_A Protein kinase, putativ 100.0 2.4E-38 8.1E-43 357.2 13.6 297 617-944 16-326 (360)
207 1u5q_A Serine/threonine protei 100.0 1.1E-37 3.7E-42 349.5 18.6 199 623-837 53-258 (348)
208 2h34_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 344.0 18.3 259 623-900 33-296 (309)
209 2zmd_A Dual specificity protei 100.0 1.1E-37 3.9E-42 355.0 18.9 250 624-894 56-321 (390)
210 4fl3_A Tyrosine-protein kinase 100.0 7.3E-38 2.5E-42 377.2 18.3 251 630-900 375-631 (635)
211 1fvr_A Tyrosine-protein kinase 100.0 7E-38 2.4E-42 348.5 16.6 257 624-901 25-301 (327)
212 2buj_A Serine/threonine-protei 100.0 1.6E-37 5.5E-42 343.9 19.3 270 622-902 27-308 (317)
213 4hgt_A Casein kinase I isoform 100.0 9.1E-38 3.1E-42 342.1 17.2 270 622-903 7-283 (296)
214 3uzp_A CKI-delta, CKID, casein 100.0 5.5E-37 1.9E-41 335.9 23.4 266 623-903 8-283 (296)
215 4eut_A Serine/threonine-protei 100.0 7.4E-38 2.5E-42 357.6 17.0 267 623-900 8-309 (396)
216 2eu9_A Dual specificity protei 100.0 4.6E-38 1.6E-42 353.8 14.8 290 623-940 18-341 (355)
217 2ycf_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 350.3 13.1 200 622-835 8-222 (322)
218 3dls_A PAS domain-containing s 100.0 4.4E-38 1.5E-42 350.9 13.9 200 622-834 22-232 (335)
219 2clq_A Mitogen-activated prote 100.0 2.8E-37 9.6E-42 338.1 19.9 200 625-834 23-227 (295)
220 2w5a_A Serine/threonine-protei 100.0 8.8E-38 3E-42 339.2 15.1 253 623-892 5-266 (279)
221 2vgo_A Serine/threonine-protei 100.0 2.3E-37 7.8E-42 337.0 18.0 200 623-836 13-216 (284)
222 1q8y_A SR protein kinase; tran 100.0 4.8E-38 1.6E-42 356.4 12.6 290 623-941 18-342 (373)
223 3bhy_A Death-associated protei 100.0 2.9E-37 1E-41 335.8 17.7 201 623-836 4-215 (283)
224 2wtk_C Serine/threonine-protei 100.0 8.1E-37 2.8E-41 336.2 21.3 252 623-894 4-264 (305)
225 3a7i_A MST3 kinase, serine/thr 100.0 5.4E-37 1.9E-41 337.4 19.4 201 623-836 21-223 (303)
226 3q60_A ROP5B; pseudokinase, tr 100.0 4.2E-38 1.4E-42 356.7 10.8 198 623-835 61-296 (371)
227 3vq2_A TLR4, TOLL-like recepto 100.0 1.7E-36 5.8E-41 366.7 25.6 343 69-418 15-589 (606)
228 3gxj_A TGF-beta receptor type- 100.0 4.2E-39 1.4E-43 353.9 2.2 259 623-899 2-296 (303)
229 2h6d_A 5'-AMP-activated protei 100.0 2.5E-37 8.5E-42 335.1 16.1 200 623-835 10-214 (276)
230 3ll6_A Cyclin G-associated kin 100.0 3.4E-37 1.2E-41 344.1 17.3 266 622-903 26-311 (337)
231 1b6c_B TGF-B superfamily recep 100.0 1.3E-36 4.4E-41 340.3 22.0 266 616-901 34-337 (342)
232 3coi_A Mitogen-activated prote 100.0 9.4E-38 3.2E-42 351.3 12.2 276 623-939 23-312 (353)
233 3sv0_A Casein kinase I-like; t 100.0 5.9E-37 2E-41 356.6 18.9 268 623-902 6-280 (483)
234 2x7f_A TRAF2 and NCK-interacti 100.0 2.7E-37 9.3E-42 343.5 15.4 212 614-836 14-238 (326)
235 3fme_A Dual specificity mitoge 100.0 5.2E-37 1.8E-41 335.1 17.1 203 622-836 5-217 (290)
236 3rgz_A Protein brassinosteroid 100.0 4.8E-37 1.6E-41 380.8 18.9 300 81-386 342-718 (768)
237 1u46_A ACK-1, activated CDC42 100.0 3.9E-37 1.3E-41 336.2 15.5 260 623-900 17-284 (291)
238 3an0_A Dual specificity mitoge 100.0 5.2E-37 1.8E-41 343.4 16.3 203 622-836 49-261 (340)
239 3com_A Serine/threonine-protei 100.0 1.8E-36 6.1E-41 335.0 19.5 202 622-836 27-229 (314)
240 2vwi_A Serine/threonine-protei 100.0 2E-37 6.7E-42 340.6 11.5 277 619-940 10-295 (303)
241 2j0j_A Focal adhesion kinase 1 100.0 9.8E-37 3.3E-41 368.8 18.5 262 618-900 384-651 (656)
242 3qa8_A MGC80376 protein; kinas 100.0 4E-37 1.4E-41 365.1 14.0 203 624-837 14-228 (676)
243 2rio_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 353.7 15.2 201 625-835 16-243 (434)
244 3cek_A Dual specificity protei 100.0 8.5E-37 2.9E-41 337.5 14.5 211 614-836 18-243 (313)
245 4g8a_A TOLL-like receptor 4; l 100.0 5.9E-36 2E-40 363.7 21.9 359 69-437 35-627 (635)
246 1zy4_A Serine/threonine-protei 100.0 5.2E-36 1.8E-40 329.0 17.6 204 623-834 5-230 (303)
247 3p23_A Serine/threonine-protei 100.0 2.2E-36 7.4E-41 348.5 14.6 201 622-834 22-232 (432)
248 3aln_A Dual specificity mitoge 100.0 5.7E-36 2E-40 333.0 17.3 250 623-893 21-285 (327)
249 2iwi_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 332.4 14.7 202 619-834 26-241 (312)
250 3t6q_A CD180 antigen; protein- 100.0 6.4E-36 2.2E-40 361.6 18.3 327 83-418 255-591 (606)
251 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.7E-37 2E-41 339.7 8.2 268 615-901 24-303 (319)
252 3fhr_A MAP kinase-activated pr 100.0 7.1E-36 2.4E-40 333.5 15.9 197 622-835 26-232 (336)
253 2wei_A Calmodulin-domain prote 100.0 1.7E-35 5.7E-40 322.8 17.2 201 622-836 20-226 (287)
254 3a99_A Proto-oncogene serine/t 100.0 2.9E-36 9.8E-41 334.3 10.6 201 620-834 39-251 (320)
255 2dyl_A Dual specificity mitoge 100.0 6.1E-36 2.1E-40 331.2 13.2 249 623-893 24-283 (318)
256 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.3E-35 2.9E-39 348.4 22.2 307 81-399 51-525 (562)
257 2z7x_B TOLL-like receptor 1, v 100.0 1.9E-35 6.5E-40 350.7 16.3 182 223-417 321-510 (520)
258 3o6n_A APL1; leucine-rich repe 100.0 3.5E-35 1.2E-39 335.1 17.6 333 54-398 3-365 (390)
259 3j0a_A TOLL-like receptor 5; m 100.0 8.3E-35 2.8E-39 364.4 21.0 316 82-399 73-574 (844)
260 1ziw_A TOLL-like receptor 3; i 100.0 3.1E-34 1.1E-38 351.7 25.2 329 84-418 250-655 (680)
261 3oja_B Anopheles plasmodium-re 100.0 1.2E-34 4.1E-39 349.1 18.7 333 53-397 8-370 (597)
262 2vuw_A Serine/threonine-protei 100.0 6.7E-36 2.3E-40 333.8 6.2 192 622-833 18-278 (336)
263 2z81_A CD282 antigen, TOLL-lik 100.0 2.5E-34 8.6E-39 343.4 20.1 339 65-416 4-538 (549)
264 4eco_A Uncharacterized protein 100.0 8.1E-34 2.8E-38 343.9 19.0 294 80-386 247-601 (636)
265 3m2w_A MAP kinase-activated pr 100.0 1.5E-33 5.3E-38 309.2 18.4 175 624-835 17-201 (299)
266 3uqc_A Probable conserved tran 100.0 1.4E-33 4.9E-38 307.0 17.1 229 623-900 30-265 (286)
267 2pzi_A Probable serine/threoni 100.0 9.2E-34 3.1E-38 346.2 16.3 239 623-899 79-327 (681)
268 3dzo_A Rhoptry kinase domain; 100.0 1.6E-33 5.6E-38 323.2 16.4 240 624-893 78-363 (413)
269 1ogq_A PGIP-2, polygalacturona 100.0 7E-34 2.4E-38 313.8 10.5 254 106-389 50-308 (313)
270 2z63_A TOLL-like receptor 4, v 100.0 4.6E-33 1.6E-37 334.0 18.4 150 247-401 392-548 (570)
271 4ecn_A Leucine-rich repeat pro 100.0 1.7E-32 5.8E-37 338.0 21.3 290 81-384 447-818 (876)
272 3t6q_A CD180 antigen; protein- 100.0 8.9E-32 3E-36 325.3 22.0 319 60-385 5-389 (606)
273 4fcg_A Uncharacterized protein 100.0 2.8E-32 9.5E-37 302.9 12.8 285 31-365 23-316 (328)
274 3zyj_A Leucine-rich repeat-con 100.0 2E-31 6.9E-36 308.9 20.5 298 85-441 46-345 (440)
275 2id5_A Lingo-1, leucine rich r 100.0 8.4E-32 2.9E-36 315.7 16.7 305 80-390 54-361 (477)
276 3v47_A TOLL-like receptor 5B a 100.0 6.6E-32 2.2E-36 314.6 15.3 280 80-365 52-410 (455)
277 3j0a_A TOLL-like receptor 5; m 100.0 6.9E-31 2.4E-35 328.9 24.6 300 80-385 22-375 (844)
278 1ziw_A TOLL-like receptor 3; i 100.0 9.5E-31 3.3E-35 320.8 24.3 187 63-250 2-194 (680)
279 3zyi_A Leucine-rich repeat-con 100.0 3.3E-31 1.1E-35 308.2 18.9 299 107-440 55-355 (452)
280 2ft3_A Biglycan; proteoglycan, 100.0 3.5E-30 1.2E-34 286.9 23.9 268 106-382 54-330 (332)
281 2z80_A TOLL-like receptor 2, v 100.0 5.9E-32 2E-36 304.0 9.1 307 62-417 27-343 (353)
282 1xku_A Decorin; proteoglycan, 100.0 4.2E-30 1.4E-34 286.0 22.3 269 106-382 52-329 (330)
283 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-30 4.4E-35 309.1 17.9 290 82-385 21-457 (520)
284 2z63_A TOLL-like receptor 4, v 100.0 2.8E-30 9.7E-35 309.7 18.3 135 246-385 368-507 (570)
285 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.3E-30 2.2E-34 306.0 20.4 147 85-238 34-181 (562)
286 1xku_A Decorin; proteoglycan, 100.0 2E-29 6.7E-34 280.6 22.6 288 61-361 27-330 (330)
287 2ft3_A Biglycan; proteoglycan, 100.0 1.4E-29 4.9E-34 281.9 21.5 287 61-361 29-331 (332)
288 4fmz_A Internalin; leucine ric 100.0 4.3E-29 1.5E-33 279.8 22.3 281 81-384 65-345 (347)
289 2z66_A Variable lymphocyte rec 100.0 5.7E-30 1.9E-34 281.8 12.3 255 61-336 3-263 (306)
290 2z66_A Variable lymphocyte rec 100.0 5.9E-30 2E-34 281.6 12.4 275 109-417 10-291 (306)
291 3vq2_A TLR4, TOLL-like recepto 100.0 5.5E-29 1.9E-33 300.9 21.7 153 85-240 14-167 (606)
292 3o6n_A APL1; leucine-rich repe 100.0 8.5E-29 2.9E-33 282.2 18.8 272 102-384 41-330 (390)
293 3oja_B Anopheles plasmodium-re 100.0 9.9E-29 3.4E-33 297.5 19.2 264 103-383 48-312 (597)
294 3bz5_A Internalin-J, INLJ; leu 100.0 7.1E-28 2.4E-32 279.5 25.6 278 82-385 64-352 (457)
295 2z81_A CD282 antigen, TOLL-lik 100.0 2.8E-29 9.6E-34 299.7 13.9 171 87-261 10-182 (549)
296 1o6v_A Internalin A; bacterial 100.0 4.3E-28 1.5E-32 283.1 23.4 277 81-384 67-343 (466)
297 1o6v_A Internalin A; bacterial 100.0 5.6E-28 1.9E-32 282.2 21.8 284 80-385 88-388 (466)
298 4fmz_A Internalin; leucine ric 100.0 1.7E-27 5.9E-32 266.8 23.3 284 81-389 43-328 (347)
299 1wwl_A Monocyte differentiatio 100.0 5.6E-30 1.9E-34 282.6 2.6 245 82-335 43-310 (312)
300 1ozn_A Reticulon 4 receptor; N 100.0 1.3E-28 4.5E-33 268.0 11.8 235 106-342 32-269 (285)
301 4fcg_A Uncharacterized protein 99.9 9.3E-28 3.2E-32 266.4 16.9 233 104-384 79-313 (328)
302 1ozn_A Reticulon 4 receptor; N 99.9 8.2E-28 2.8E-32 261.6 15.3 237 109-399 14-252 (285)
303 3zyj_A Leucine-rich repeat-con 99.9 2.6E-27 9E-32 274.3 20.5 247 62-334 38-292 (440)
304 3g06_A SSPH2 (leucine-rich rep 99.9 1.5E-27 5.2E-32 284.8 16.2 285 54-386 12-298 (622)
305 3zyi_A Leucine-rich repeat-con 99.9 3.5E-27 1.2E-31 274.2 18.4 244 85-334 57-303 (452)
306 4g8a_A TOLL-like receptor 4; l 99.9 9.3E-27 3.2E-31 282.6 22.8 176 52-240 11-187 (635)
307 2z80_A TOLL-like receptor 2, v 99.9 8.5E-28 2.9E-32 270.0 11.7 256 81-338 51-318 (353)
308 1wwl_A Monocyte differentiatio 99.9 8.8E-29 3E-33 272.9 3.3 248 103-385 40-309 (312)
309 1jl5_A Outer protein YOPM; leu 99.9 3.2E-27 1.1E-31 273.8 16.2 268 82-386 11-291 (454)
310 4azs_A Methyltransferase WBDD; 99.9 1.3E-28 4.3E-33 292.3 4.5 183 632-830 242-436 (569)
311 1jl5_A Outer protein YOPM; leu 99.9 1E-25 3.5E-30 261.1 26.5 264 82-385 91-370 (454)
312 3bz5_A Internalin-J, INLJ; leu 99.9 1.6E-26 5.6E-31 268.0 19.6 275 81-386 41-332 (457)
313 3oja_A Leucine-rich immune mol 99.9 7.6E-28 2.6E-32 281.7 5.8 229 103-344 31-261 (487)
314 2z62_A TOLL-like receptor 4, v 99.9 7.2E-27 2.4E-31 252.9 12.6 233 106-417 28-266 (276)
315 1p9a_G Platelet glycoprotein I 99.9 7E-26 2.4E-30 246.7 17.5 219 150-403 6-226 (290)
316 3o53_A Protein LRIM1, AGAP0063 99.9 2.1E-27 7.1E-32 262.6 5.3 258 83-358 11-270 (317)
317 2o6q_A Variable lymphocyte rec 99.9 5.6E-25 1.9E-29 237.2 19.1 212 66-287 6-218 (270)
318 3o53_A Protein LRIM1, AGAP0063 99.9 4.8E-27 1.6E-31 259.7 0.8 245 81-339 33-281 (317)
319 3oja_A Leucine-rich immune mol 99.9 2.2E-26 7.4E-31 269.4 5.4 235 81-329 33-270 (487)
320 2z62_A TOLL-like receptor 4, v 99.9 4.4E-25 1.5E-29 238.8 14.7 226 61-288 1-238 (276)
321 2o6q_A Variable lymphocyte rec 99.9 2.8E-24 9.5E-29 231.7 17.9 213 108-398 18-232 (270)
322 4glp_A Monocyte differentiatio 99.9 2E-24 6.9E-29 237.8 15.4 224 106-335 64-308 (310)
323 3en9_A Glycoprotease, O-sialog 99.9 1.6E-25 5.4E-30 264.3 4.3 190 627-832 339-538 (540)
324 1z7x_W Ribonuclease inhibitor; 99.9 2.2E-27 7.4E-32 276.8 -12.6 305 82-386 56-412 (461)
325 3rfs_A Internalin B, repeat mo 99.9 2.9E-24 9.9E-29 231.8 12.1 211 102-347 37-248 (272)
326 3g06_A SSPH2 (leucine-rich rep 99.9 8.8E-23 3E-27 243.7 24.5 239 82-365 61-299 (622)
327 1p9a_G Platelet glycoprotein I 99.9 2.3E-23 8E-28 226.7 16.0 202 102-334 6-208 (290)
328 1z7x_W Ribonuclease inhibitor; 99.9 2E-26 6.9E-31 268.6 -12.1 303 82-385 3-354 (461)
329 3m19_A Variable lymphocyte rec 99.9 4.4E-23 1.5E-27 219.8 14.2 191 62-289 3-194 (251)
330 2xwt_C Thyrotropin receptor; s 99.9 3.5E-23 1.2E-27 218.8 13.3 194 107-307 32-236 (239)
331 3rfs_A Internalin B, repeat mo 99.9 3.4E-23 1.2E-27 223.4 13.5 204 81-295 40-243 (272)
332 4glp_A Monocyte differentiatio 99.9 2.8E-23 9.5E-28 228.7 9.8 224 83-311 65-308 (310)
333 1h6u_A Internalin H; cell adhe 99.9 1.5E-22 5E-27 222.5 13.5 193 128-335 39-231 (308)
334 3cvr_A Invasion plasmid antige 99.9 1.5E-22 5E-27 238.9 13.3 224 107-397 60-292 (571)
335 3m19_A Variable lymphocyte rec 99.9 2.9E-22 9.8E-27 213.5 13.7 202 132-338 16-225 (251)
336 3goz_A Leucine-rich repeat-con 99.9 1.1E-24 3.9E-29 245.3 -5.3 258 87-364 3-298 (362)
337 4ay9_X Follicle-stimulating ho 99.9 4.8E-22 1.6E-26 222.7 15.5 246 63-333 7-258 (350)
338 2xwt_C Thyrotropin receptor; s 99.9 3E-22 1E-26 211.6 12.6 218 61-284 6-236 (239)
339 3goz_A Leucine-rich repeat-con 99.9 5.9E-24 2E-28 239.5 -1.0 255 110-387 2-299 (362)
340 2o6s_A Variable lymphocyte rec 99.9 1.2E-21 4E-26 202.4 14.6 183 61-251 3-189 (208)
341 1zar_A RIO2 kinase; serine kin 99.9 2.5E-22 8.6E-27 217.2 9.1 153 617-806 83-253 (282)
342 4ay9_X Follicle-stimulating ho 99.9 6.9E-22 2.4E-26 221.4 12.8 244 109-389 12-262 (350)
343 2ast_B S-phase kinase-associat 99.9 1.4E-24 4.9E-29 241.8 -9.1 209 66-285 38-258 (336)
344 2ca6_A RAN GTPase-activating p 99.9 4.8E-24 1.6E-28 242.5 -7.9 240 98-337 24-319 (386)
345 2ca6_A RAN GTPase-activating p 99.8 9.6E-24 3.3E-28 240.0 -6.8 242 121-366 23-319 (386)
346 1h6u_A Internalin H; cell adhe 99.8 5.3E-21 1.8E-25 210.1 14.0 190 82-287 41-230 (308)
347 3cvr_A Invasion plasmid antige 99.8 1.1E-21 3.6E-26 231.6 8.9 202 55-291 34-247 (571)
348 2ast_B S-phase kinase-associat 99.8 9.5E-23 3.2E-27 227.1 -1.4 249 107-367 48-310 (336)
349 2o6s_A Variable lymphocyte rec 99.8 1.9E-20 6.4E-25 193.3 11.9 108 131-238 29-136 (208)
350 2v9t_B SLIT homolog 2 protein 99.8 5.4E-20 1.9E-24 191.5 12.2 194 205-437 14-212 (220)
351 2xot_A Amphoterin-induced prot 99.8 4.3E-20 1.5E-24 207.7 10.7 24 375-398 192-216 (361)
352 2v70_A SLIT-2, SLIT homolog 2 99.8 5.7E-20 2E-24 191.3 10.0 163 206-398 15-179 (220)
353 3e6j_A Variable lymphocyte rec 99.8 2.2E-19 7.6E-24 188.1 13.3 155 65-240 19-173 (229)
354 2v9t_B SLIT homolog 2 protein 99.8 1.9E-19 6.6E-24 187.3 11.5 159 61-239 7-165 (220)
355 2v70_A SLIT-2, SLIT homolog 2 99.8 3.5E-19 1.2E-23 185.4 11.5 152 86-240 15-167 (220)
356 4b8c_D Glucose-repressible alc 99.8 3.4E-20 1.2E-24 226.8 3.0 231 34-284 131-369 (727)
357 1h6t_A Internalin B; cell adhe 99.8 3.3E-19 1.1E-23 194.0 9.8 85 247-335 130-214 (291)
358 1m9s_A Internalin B; cell inva 99.8 3.7E-19 1.3E-23 212.2 10.7 172 102-287 39-210 (605)
359 1h6t_A Internalin B; cell adhe 99.8 4E-19 1.4E-23 193.3 10.0 171 103-287 43-213 (291)
360 1m9s_A Internalin B; cell inva 99.8 2.7E-19 9.1E-24 213.4 9.1 190 108-336 23-212 (605)
361 2xot_A Amphoterin-induced prot 99.8 5.8E-19 2E-23 198.4 9.6 176 86-265 22-203 (361)
362 1dce_A Protein (RAB geranylger 99.8 6.2E-21 2.1E-25 226.2 -7.6 204 103-339 346-551 (567)
363 3e6j_A Variable lymphocyte rec 99.7 4.8E-18 1.7E-22 177.9 13.2 153 109-290 22-175 (229)
364 1zth_A RIO1 serine protein kin 99.7 2.6E-18 9E-23 183.3 10.7 136 626-775 49-219 (258)
365 3ogk_B Coronatine-insensitive 99.7 1.4E-20 4.9E-25 226.4 -8.0 295 84-384 140-500 (592)
366 1dce_A Protein (RAB geranylger 99.7 2.1E-20 7.1E-25 221.7 -6.7 200 152-379 347-567 (567)
367 3ogk_B Coronatine-insensitive 99.7 3.9E-20 1.3E-24 222.6 -5.3 296 82-385 164-526 (592)
368 1xeu_A Internalin C; cellular 99.7 7.1E-19 2.4E-23 188.3 4.9 169 105-288 18-186 (263)
369 4ezg_A Putative uncharacterize 99.7 7E-18 2.4E-22 172.3 9.2 152 128-287 42-194 (197)
370 4ezg_A Putative uncharacterize 99.7 5.9E-18 2E-22 172.9 8.1 155 102-265 40-195 (197)
371 2wfh_A SLIT homolog 2 protein 99.7 3.5E-17 1.2E-21 166.4 11.7 158 254-424 13-173 (193)
372 1xeu_A Internalin C; cellular 99.7 1.3E-17 4.4E-22 178.5 8.0 171 128-336 17-187 (263)
373 4b8c_D Glucose-repressible alc 99.7 1.2E-17 4E-22 204.3 7.9 168 83-261 192-369 (727)
374 1w8a_A SLIT protein; signaling 99.7 5.6E-17 1.9E-21 164.8 10.2 129 87-218 13-142 (192)
375 1w8a_A SLIT protein; signaling 99.7 8E-17 2.7E-21 163.7 11.3 172 254-437 11-186 (192)
376 2p1m_B Transport inhibitor res 99.7 6.1E-19 2.1E-23 212.2 -9.7 126 82-209 105-242 (594)
377 2ell_A Acidic leucine-rich nuc 99.6 2.3E-16 8E-21 156.5 9.6 133 105-239 23-160 (168)
378 2o6r_A Variable lymphocyte rec 99.6 4.3E-16 1.5E-20 156.0 11.4 137 61-217 3-139 (177)
379 2ell_A Acidic leucine-rich nuc 99.6 4.1E-16 1.4E-20 154.7 8.4 131 155-287 25-160 (168)
380 4gyi_A RIO2 kinase; protein ki 99.6 3.2E-16 1.1E-20 173.5 8.0 141 625-776 96-266 (397)
381 2p1m_B Transport inhibitor res 99.6 5E-18 1.7E-22 204.2 -7.4 174 81-258 129-345 (594)
382 2je0_A Acidic leucine-rich nuc 99.6 3.1E-16 1.1E-20 152.2 5.0 110 106-217 17-128 (149)
383 2wfh_A SLIT homolog 2 protein 99.6 1.6E-15 5.6E-20 154.0 10.0 127 85-215 13-139 (193)
384 2o6r_A Variable lymphocyte rec 99.6 4.8E-15 1.6E-19 148.3 11.0 130 108-240 9-138 (177)
385 2je0_A Acidic leucine-rich nuc 99.6 1.2E-15 4.2E-20 148.0 5.9 129 81-211 16-149 (149)
386 3g39_A Variable lymphocyte rec 99.5 2E-14 6.9E-19 142.7 9.8 134 276-416 11-150 (170)
387 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.7E-21 163.6 -8.0 133 129-266 17-155 (198)
388 1ds9_A Outer arm dynein; leuci 99.5 7.8E-17 2.7E-21 164.6 -9.5 152 105-264 17-185 (198)
389 3sb4_A Hypothetical leucine ri 99.5 2.1E-14 7.1E-19 159.0 8.2 100 105-211 48-157 (329)
390 1a9n_A U2A', U2A'; complex (nu 99.5 8.6E-15 2.9E-19 146.4 4.4 133 100-238 13-152 (176)
391 2r9u_A Variable lymphocyte rec 99.5 6.9E-14 2.4E-18 139.4 8.9 120 277-403 15-137 (174)
392 3sb4_A Hypothetical leucine ri 99.5 3E-14 1E-18 157.7 5.8 253 82-348 49-324 (329)
393 1a9n_A U2A', U2A'; complex (nu 99.4 2.5E-14 8.4E-19 143.0 4.2 110 125-239 14-126 (176)
394 4fdw_A Leucine rich hypothetic 99.4 8.7E-13 3E-17 149.4 15.8 262 84-364 115-384 (401)
395 3g39_A Variable lymphocyte rec 99.4 3.2E-13 1.1E-17 134.0 9.6 104 85-191 12-115 (170)
396 4fdw_A Leucine rich hypothetic 99.4 1E-12 3.5E-17 148.9 15.0 261 104-383 111-381 (401)
397 2r9u_A Variable lymphocyte rec 99.4 3.6E-13 1.2E-17 134.1 9.1 104 85-191 15-118 (174)
398 2ifg_A High affinity nerve gro 99.3 1.7E-12 5.7E-17 144.8 9.0 130 279-418 13-146 (347)
399 2ifg_A High affinity nerve gro 99.3 2.1E-12 7E-17 144.0 9.4 112 62-192 4-117 (347)
400 3tm0_A Aminoglycoside 3'-phosp 99.2 3.6E-11 1.2E-15 128.2 10.2 144 622-773 12-212 (263)
401 3un9_A NLR family member X1; l 99.2 1.6E-13 5.6E-18 153.9 -10.2 95 250-344 154-262 (372)
402 3un9_A NLR family member X1; l 99.2 2.5E-13 8.6E-18 152.4 -9.0 161 106-287 72-252 (372)
403 4fs7_A Uncharacterized protein 99.0 6.9E-09 2.4E-13 117.5 19.1 281 83-382 72-376 (394)
404 1nd4_A Aminoglycoside 3'-phosp 99.0 3.6E-10 1.2E-14 120.0 7.9 129 633-774 29-214 (264)
405 3dxp_A Putative acyl-COA dehyd 98.9 3E-09 1E-13 118.9 10.4 141 629-774 43-248 (359)
406 4fs7_A Uncharacterized protein 98.8 3.5E-08 1.2E-12 111.7 17.0 177 97-282 62-238 (394)
407 3sg8_A APH(2'')-ID; antibiotic 98.8 7E-09 2.4E-13 113.0 7.5 192 629-832 25-287 (304)
408 2ra8_A Uncharacterized protein 98.7 1.2E-09 4.1E-14 121.4 0.2 183 82-287 107-320 (362)
409 2ra8_A Uncharacterized protein 98.7 1.5E-09 5E-14 120.7 0.9 134 199-336 169-322 (362)
410 4gt6_A Cell surface protein; l 98.7 3.9E-07 1.3E-11 103.0 18.7 282 84-384 66-369 (394)
411 3rfe_A Platelet glycoprotein I 98.6 1.1E-08 3.8E-13 95.8 3.4 88 325-422 12-102 (130)
412 4gt6_A Cell surface protein; l 98.6 8.6E-07 2.9E-11 100.2 18.3 267 99-382 56-344 (394)
413 3rw6_A Nuclear RNA export fact 98.6 2.6E-10 8.9E-15 120.3 -10.9 40 152-191 168-209 (267)
414 3d1u_A Putative fructosamine-3 98.5 6.7E-07 2.3E-11 96.1 11.8 75 629-707 20-97 (288)
415 3r70_A Aminoglycoside phosphot 98.4 7.8E-07 2.7E-11 97.4 12.0 136 625-774 38-237 (320)
416 3tdw_A Gentamicin resistance p 98.3 5.4E-06 1.9E-10 90.0 13.7 136 629-774 24-224 (306)
417 3rw6_A Nuclear RNA export fact 98.3 5E-08 1.7E-12 102.8 -2.8 121 134-257 120-257 (267)
418 1io0_A Tropomodulin; LRR prote 98.2 5E-08 1.7E-12 97.8 -3.1 118 98-215 28-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.2 7E-06 2.4E-10 87.3 12.0 135 631-774 31-223 (272)
420 4h09_A Hypothetical leucine ri 98.2 3.9E-05 1.3E-09 86.0 18.1 248 83-343 47-308 (379)
421 1io0_A Tropomodulin; LRR prote 98.1 2.5E-07 8.5E-12 92.6 -2.4 110 82-191 36-164 (185)
422 4h09_A Hypothetical leucine ri 98.1 8.7E-05 3E-09 83.1 18.1 236 82-330 69-319 (379)
423 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.4E-05 4.7E-10 89.0 11.2 140 629-774 46-243 (362)
424 3ats_A Putative uncharacterize 98.0 4.2E-06 1.4E-10 93.1 6.5 79 630-708 26-121 (357)
425 2q83_A YTAA protein; 2635576, 97.8 5.3E-05 1.8E-09 83.4 9.5 140 630-774 38-252 (346)
426 2olc_A MTR kinase, methylthior 97.7 7.5E-05 2.6E-09 84.2 10.5 75 629-705 35-120 (397)
427 3f7w_A Putative fructosamine-3 97.6 0.00011 3.8E-09 78.8 9.5 76 628-707 19-97 (288)
428 3jr1_A Putative fructosamine-3 97.6 0.00021 7.2E-09 77.3 10.2 137 629-770 41-232 (312)
429 3e4g_A ATP synthase subunit S, 97.4 2.5E-05 8.5E-10 76.3 0.2 34 83-116 62-95 (176)
430 2pyw_A Uncharacterized protein 97.3 0.00076 2.6E-08 76.5 11.3 73 629-704 39-122 (420)
431 3e4g_A ATP synthase subunit S, 97.3 3.6E-05 1.2E-09 75.1 -0.3 38 106-143 61-99 (176)
432 3csv_A Aminoglycoside phosphot 97.1 0.0017 5.7E-08 71.1 10.7 140 630-774 24-217 (333)
433 2ppq_A HSK, HK, homoserine kin 97.0 0.0037 1.3E-07 67.8 12.2 157 614-773 7-216 (322)
434 1zyl_A Hypothetical protein YI 96.8 0.014 4.8E-07 63.4 14.8 141 630-774 32-223 (328)
435 3dxq_A Choline/ethanolamine ki 96.7 0.0021 7.2E-08 69.2 7.5 71 629-707 23-95 (301)
436 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00037 1.3E-08 69.3 0.9 62 270-331 66-136 (197)
437 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00015 5.2E-09 72.1 -2.0 114 101-214 36-169 (197)
438 1nw1_A Choline kinase (49.2 KD 96.7 0.004 1.4E-07 70.6 9.5 72 630-707 79-159 (429)
439 3feg_A Choline/ethanolamine ki 96.5 0.0067 2.3E-07 67.3 9.8 140 630-774 56-254 (379)
440 3rfe_A Platelet glycoprotein I 96.5 0.004 1.4E-07 57.7 6.4 56 278-334 12-68 (130)
441 2qg7_A Ethanolamine kinase PV0 96.3 0.009 3.1E-07 68.1 9.6 74 629-707 113-188 (458)
442 3c5i_A Choline kinase; choline 96.0 0.0083 2.8E-07 66.5 6.9 73 630-707 39-121 (369)
443 3i1a_A Spectinomycin phosphotr 95.9 0.044 1.5E-06 59.9 12.4 31 744-774 206-236 (339)
444 4b9d_A Serine/threonine-protei 95.5 0.0022 7.4E-08 70.3 -0.4 63 876-940 218-284 (350)
445 3f2s_A CK, chetk-alpha, cholin 95.3 0.052 1.8E-06 60.4 10.0 141 630-774 58-280 (401)
446 3fdn_A Serine/threonine-protei 95.2 0.0033 1.1E-07 66.6 0.0 63 879-941 203-266 (279)
447 2vgo_A Serine/threonine-protei 94.3 0.0083 2.8E-07 63.6 0.3 35 907-941 237-271 (284)
448 2h6d_A 5'-AMP-activated protei 94.2 0.0072 2.5E-07 63.7 -0.5 63 879-941 207-270 (276)
449 2yle_A Protein spire homolog 1 93.6 0.17 6E-06 50.4 8.2 99 705-827 33-131 (229)
450 2k1k_A Ephrin type-A receptor 93.5 0.038 1.3E-06 38.4 2.3 25 555-579 6-30 (38)
451 3mes_A Choline kinase; malaria 93.4 0.17 5.7E-06 56.9 8.8 73 630-707 76-157 (424)
452 3hko_A Calcium/calmodulin-depe 93.0 0.011 3.8E-07 64.5 -1.5 35 907-941 305-339 (345)
453 2wtk_C Serine/threonine-protei 93.0 0.025 8.5E-07 60.5 1.1 63 879-941 209-272 (305)
454 3bhy_A Death-associated protei 92.6 0.022 7.6E-07 60.1 0.1 33 906-938 239-271 (283)
455 3m2w_A MAP kinase-activated pr 92.3 0.0088 3E-07 64.0 -3.6 32 910-941 234-265 (299)
456 1zy4_A Serine/threonine-protei 92.0 0.026 9E-07 60.0 -0.3 31 909-939 260-290 (303)
457 3fme_A Dual specificity mitoge 91.9 0.013 4.3E-07 62.3 -2.9 31 910-940 244-274 (290)
458 3qd2_B Eukaryotic translation 91.8 0.014 4.8E-07 63.2 -2.8 28 911-938 304-331 (332)
459 2wei_A Calmodulin-domain prote 91.4 0.027 9.3E-07 59.7 -1.0 32 908-939 252-283 (287)
460 2vwi_A Serine/threonine-protei 91.2 0.017 5.7E-07 61.7 -3.0 33 861-893 255-287 (303)
461 3com_A Serine/threonine-protei 91.1 0.076 2.6E-06 56.9 2.2 33 909-941 255-287 (314)
462 3fhr_A MAP kinase-activated pr 90.9 0.01 3.5E-07 64.8 -5.1 32 910-941 265-296 (336)
463 2clq_A Mitogen-activated prote 90.6 0.037 1.3E-06 58.7 -0.9 31 911-941 257-287 (295)
464 3dls_A PAS domain-containing s 90.3 0.031 1.1E-06 61.0 -1.9 29 911-939 253-281 (335)
465 3dbq_A Dual specificity protei 90.1 0.031 1E-06 61.1 -2.1 32 909-940 250-281 (343)
466 2ks1_B Epidermal growth factor 90.1 0.38 1.3E-05 34.4 4.3 12 561-572 12-23 (44)
467 3a99_A Proto-oncogene serine/t 89.5 0.04 1.4E-06 59.5 -1.8 31 911-941 272-302 (320)
468 3an0_A Dual specificity mitoge 89.4 0.029 9.9E-07 61.1 -3.1 31 911-941 289-319 (340)
469 3g15_A CK, chetk-alpha, cholin 89.3 1 3.5E-05 50.1 9.6 29 746-774 246-280 (401)
470 3a7i_A MST3 kinase, serine/thr 89.3 0.071 2.4E-06 56.8 0.0 35 909-943 247-281 (303)
471 3cek_A Dual specificity protei 89.3 0.036 1.2E-06 59.6 -2.3 31 911-941 271-301 (313)
472 2w5a_A Serine/threonine-protei 89.1 0.088 3E-06 55.3 0.6 63 879-941 212-276 (279)
473 2l2t_A Receptor tyrosine-prote 88.9 0.34 1.2E-05 34.6 3.3 7 565-571 12-18 (44)
474 2iwi_A Serine/threonine-protei 88.8 0.052 1.8E-06 58.2 -1.5 31 911-941 262-292 (312)
475 2zmd_A Dual specificity protei 88.5 0.046 1.6E-06 61.0 -2.2 32 909-940 297-328 (390)
476 2dyl_A Dual specificity mitoge 88.5 0.042 1.4E-06 59.0 -2.5 31 908-938 259-289 (318)
477 2x7f_A TRAF2 and NCK-interacti 88.3 0.039 1.3E-06 59.6 -2.9 30 911-940 265-294 (326)
478 3aln_A Dual specificity mitoge 86.8 0.041 1.4E-06 59.5 -3.9 30 909-938 262-291 (327)
479 1u5q_A Serine/threonine protei 86.4 0.2 6.9E-06 54.7 1.4 33 909-941 282-314 (348)
480 2jwa_A Receptor tyrosine-prote 84.8 0.87 3E-05 32.5 3.5 8 561-568 13-20 (44)
481 3dzo_A Rhoptry kinase domain; 82.8 0.071 2.4E-06 59.9 -4.5 33 906-938 337-369 (413)
482 3cxl_A N-chimerin; SH2, RHO-GA 74.3 0.38 1.3E-05 54.7 -1.9 59 628-689 146-213 (463)
483 4euu_A Serine/threonine-protei 72.4 0.3 1E-05 52.4 -3.2 26 910-935 280-305 (319)
484 3hyh_A Carbon catabolite-derep 70.1 1.4 4.8E-05 46.1 1.5 29 866-894 235-263 (275)
485 1q8y_A SR protein kinase; tran 70.1 2.5 8.5E-05 46.0 3.6 33 861-893 301-333 (373)
486 2ks1_B Epidermal growth factor 68.3 5.6 0.00019 28.4 3.8 23 560-582 8-30 (44)
487 2eue_A Carbon catabolite derep 67.0 1.3 4.5E-05 45.9 0.4 29 866-894 235-263 (275)
488 4fvq_A Tyrosine-protein kinase 66.2 2 6.8E-05 44.8 1.7 47 887-933 223-269 (289)
489 1z57_A Dual specificity protei 65.5 3.1 0.00011 44.3 3.1 32 862-893 297-328 (339)
490 4g3f_A NF-kappa-beta-inducing 65.2 0.86 2.9E-05 49.3 -1.5 36 904-939 281-329 (336)
491 1wak_A Serine/threonine-protei 65.0 3.1 0.0001 45.6 3.0 28 911-938 370-397 (397)
492 2k9y_A Ephrin type-A receptor 64.7 3.5 0.00012 29.0 2.2 16 562-577 12-27 (41)
493 2l2t_A Receptor tyrosine-prote 63.9 7.9 0.00027 27.7 3.8 30 558-587 8-37 (44)
494 4ano_A ESSB; membrane protein, 60.5 16 0.00055 36.3 6.9 83 678-772 48-131 (219)
495 4agu_A Cyclin-dependent kinase 60.2 2.9 9.9E-05 44.1 1.6 29 866-894 257-285 (311)
496 2eu9_A Dual specificity protei 60.0 4.5 0.00015 43.4 3.1 31 863-893 303-333 (355)
497 2vx3_A Dual specificity tyrosi 59.3 5.4 0.00019 43.6 3.7 29 911-939 351-379 (382)
498 3ork_A Serine/threonine protei 58.5 0.89 3E-05 48.4 -2.9 33 906-938 247-279 (311)
499 3is5_A Calcium-dependent prote 57.6 5.4 0.00019 41.5 3.1 26 868-893 253-278 (285)
500 3gni_B Strad alpha; kinase fol 57.2 3.3 0.00011 45.5 1.4 33 862-894 302-334 (389)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.1e-52 Score=457.24 Aligned_cols=262 Identities=30% Similarity=0.486 Sum_probs=222.9
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC------CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 56778899999999999999864 478899999988777777899999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-----------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEE
Q 002174 698 VYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
|||||++|+|.++++... ...++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 356999999999999999999999998 999999999999999999999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~ 845 (956)
+|||+|+.....+ .........||+.|||||++.+..|+.++|||||||++|||+| |+.||...... +..
T Consensus 170 ~DFGla~~~~~~~-----~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~--- 240 (299)
T 4asz_A 170 GDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVI--- 240 (299)
T ss_dssp CCCSCHHHHTGGG-----CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHH---
T ss_pred CCcccceecCCCC-----ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHH---
Confidence 9999998654322 1122234569999999999999999999999999999999999 89999764432 111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
..+..+.....|..+++++.+++.+||+.+|++||++.++.+.|+++.+..|
T Consensus 241 ------~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 241 ------ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp ------HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred ------HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 1223344556678888999999999999999999999999999999877654
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.6e-52 Score=458.64 Aligned_cols=262 Identities=29% Similarity=0.498 Sum_probs=216.7
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC------CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++|.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666789999999999999864 478999999988777777899999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC-------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002174 698 VYEFMSNGTLRDQLSAKS-------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
|||||++|+|.++++... ..+++|.+++.|+.|||+||+|||+++ ||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence 999999999999997642 246899999999999999999999998 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002174 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 843 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~ 843 (956)
||+|||+|+.....+. ........||+.|||||++.+..++.++|||||||++|||+| |+.||....... ...
T Consensus 198 Ki~DFGla~~~~~~~~-----~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~-~~~ 271 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTE-AID 271 (329)
T ss_dssp EECCCC---------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHH-HHH
T ss_pred EEcccccceeccCCCc-----ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHH-HHH
Confidence 9999999987643321 122344579999999999999999999999999999999999 899997654321 111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
.+..+.....|+.+++++.+++.+||+.+|++||++.+|++.|+.+.+..|
T Consensus 272 ---------~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 272 ---------CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp ---------HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred ---------HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 222334456677888999999999999999999999999999999876544
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.2e-52 Score=453.87 Aligned_cols=257 Identities=25% Similarity=0.419 Sum_probs=216.1
Q ss_pred CCCCCCeeeeeCCeeEEEEEeC------CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++++.++||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+++..+|
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3555789999999999999863 468999999975432 335789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002174 698 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
|||||++|+|.++|+.+. ...++|..+++|+.|||+||+|||+++ ||||||||+|||++++++
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999997532 235899999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHH
Q 002174 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~ 842 (956)
+||+|||+|+.....+. ........||+.|||||++.++.|+.++|||||||++|||+| |+.||...... +..
T Consensus 184 ~Ki~DFGlar~~~~~~~-----~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~ 257 (308)
T 4gt4_A 184 VKISDLGLFREVYAADY-----YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVV 257 (308)
T ss_dssp EEECCSCCBCGGGGGGC-----BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHH
T ss_pred EEECCcccceeccCCCc-----eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHH
Confidence 99999999986543221 122344579999999999999999999999999999999999 89999754432 111
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
. .+..+...+.|++++..+.+++.+||+.+|++||+|.+|++.|+.+.
T Consensus 258 ~---------~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 258 E---------MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp H---------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred H---------HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 1 22334455678888999999999999999999999999999998763
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.8e-52 Score=456.36 Aligned_cols=264 Identities=22% Similarity=0.378 Sum_probs=215.5
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~~ 702 (956)
+.|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 56888999999999999999975 69999999997554444567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002174 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++|+|.+++... .+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+......
T Consensus 154 ~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--- 224 (346)
T 4fih_A 154 EGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 224 (346)
T ss_dssp TTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---
T ss_pred CCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC---
Confidence 999999999753 4899999999999999999999999 9999999999999999999999999998764321
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002174 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......||+.|||||++.+..|+.++||||+||++|||++|+.||...... +...
T Consensus 225 ----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~------------------- 280 (346)
T 4fih_A 225 ----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMK------------------- 280 (346)
T ss_dssp ----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHH-------------------
T ss_pred ----CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHH-------------------
Confidence 2234567999999999999999999999999999999999999999754321 1111
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCCC
Q 002174 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
.+.... +..-+.. +...+.+.+||.+||+.||++|+|++|+|+||||+....-
T Consensus 281 ----------~i~~~~---~~~~~~~--------------~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~p 333 (346)
T 4fih_A 281 ----------MIRDNL---PPRLKNL--------------HKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 333 (346)
T ss_dssp ----------HHHHSS---CCCCSCG--------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCCG
T ss_pred ----------HHHcCC---CCCCCcc--------------ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCCC
Confidence 011000 0000000 0112234578999999999999999999999999877654
Q ss_pred Ccccc
Q 002174 943 SNLVS 947 (956)
Q Consensus 943 ~~~~~ 947 (956)
+.+++
T Consensus 334 ~~l~p 338 (346)
T 4fih_A 334 ASIVP 338 (346)
T ss_dssp GGTGG
T ss_pred cccCc
Confidence 44444
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.9e-51 Score=443.51 Aligned_cols=267 Identities=25% Similarity=0.452 Sum_probs=214.8
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+..++|++.++||+|+||+||+|++++ .||||+++.. .....+.|.+|++++++++|||||+++|++.+ +..+||
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iV 109 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIV 109 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEE
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEE
Confidence 345678889999999999999999753 5999998743 33445789999999999999999999999865 568999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||||++|+|.++++... ..+++..+..|+.|||+||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 110 mEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 185 (307)
T 3omv_A 110 TQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred EEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence 99999999999997643 46999999999999999999999998 999999999999999999999999999875432
Q ss_pred CCCCccccceecccccCCCccccccccc---CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
. .........||+.|||||++.+ ..|+.++|||||||++|||+||+.||....+.......... ...
T Consensus 186 ~-----~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~-----~~~ 255 (307)
T 3omv_A 186 S-----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-----GYA 255 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHT-----TCC
T ss_pred C-----cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhc-----CCC
Confidence 2 1223345679999999999964 45899999999999999999999999765443222221111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
.+.....+.+++..+.+++.+||+.+|++||+|.++++.|+.+...+|+
T Consensus 256 ~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~lpk 304 (307)
T 3omv_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccCCC
Confidence 2223345677888999999999999999999999999999988777664
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.9e-51 Score=444.59 Aligned_cols=256 Identities=20% Similarity=0.313 Sum_probs=209.5
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..||||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46999999999999999999965 69999999987532 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||++||+|.+++.+.+ .+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999997653 5899999999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
. .......+||+.|||||++.+..|+.++||||+||++|||++|+.||..... .+.... +....
T Consensus 187 ~-----~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~---------i~~~~- 250 (311)
T 4aw0_A 187 K-----QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAK---------IIKLE- 250 (311)
T ss_dssp T-----CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHH---------HHHTC-
T ss_pred C-----cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHH---------HHcCC-
Confidence 1 1223456799999999999999999999999999999999999999965432 111110 00000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCC------CCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM------LKH 933 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~------L~H 933 (956)
..+|+ ...+.+.+||.+||+.||++|+|++|+ ++|
T Consensus 251 ~~~p~---------------------------------------~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 251 YDFPE---------------------------------------KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp CCCCT---------------------------------------TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred CCCCc---------------------------------------ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 01111 112233478888999999999999986 789
Q ss_pred CcccCC
Q 002174 934 PYVSSD 939 (956)
Q Consensus 934 P~f~~~ 939 (956)
|||++-
T Consensus 292 p~F~~i 297 (311)
T 4aw0_A 292 PFFESV 297 (311)
T ss_dssp GGGTTC
T ss_pred CCcCCC
Confidence 999764
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-50 Score=457.78 Aligned_cols=265 Identities=22% Similarity=0.370 Sum_probs=217.3
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.+.|++.++||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||+++++|.+++..||||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 357999999999999999999975 6999999999765555556789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
|+||+|.++++.. .+++..+..|+.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~-- 301 (423)
T 4fie_A 230 LEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-- 301 (423)
T ss_dssp CTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--
T ss_pred CCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC--
Confidence 9999999999653 4899999999999999999999999 9999999999999999999999999998764321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......||+.|||||++.+..|+.++|||||||++|||++|+.||....... ...
T Consensus 302 -----~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~-~~~------------------ 357 (423)
T 4fie_A 302 -----PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK-AMK------------------ 357 (423)
T ss_dssp -----CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHH------------------
T ss_pred -----ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHH------------------
Confidence 22345679999999999999999999999999999999999999996543211 111
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
.+......... ..+...+.+.+||.+||+.||++|+|++|+|+||||+....
T Consensus 358 -----------~i~~~~~~~~~-----------------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 358 -----------MIRDNLPPRLK-----------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp -----------HHHHSCCCCCS-----------------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred -----------HHHcCCCCCCc-----------------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 11110000000 00112233457899999999999999999999999987765
Q ss_pred CCcccc
Q 002174 942 GSNLVS 947 (956)
Q Consensus 942 ~~~~~~ 947 (956)
-+.+++
T Consensus 410 p~~l~p 415 (423)
T 4fie_A 410 PASIVP 415 (423)
T ss_dssp GGGTGG
T ss_pred Cccccc
Confidence 555554
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.2e-50 Score=445.07 Aligned_cols=250 Identities=24% Similarity=0.377 Sum_probs=208.9
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 68999999999999999999965 69999999987543 3335689999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
||+||+|.+++..+....+++..++.|+.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998776667899999999999999999999999 999999999999999999999999999865311
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
........||+.|||||++.+..|+.++||||+||++|||+||+.||..... .+... .+..+..+
T Consensus 179 -----~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~---------~i~~~~~~ 243 (350)
T 4b9d_A 179 -----VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVL---------KIISGSFP 243 (350)
T ss_dssp -----HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHH---------HHHHTCCC
T ss_pred -----cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHH---------HHHcCCCC
Confidence 1223456799999999999999999999999999999999999999975543 22211 22333444
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
..+..++.++.+++.+||+.||++||++.++++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 556667788899999999999999999999875
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=5.1e-50 Score=440.17 Aligned_cols=254 Identities=21% Similarity=0.277 Sum_probs=208.1
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~~ 702 (956)
+.|++.++||+|+||+||+|+++ +|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 46778889999999999999975 699999999975432 246999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccccccCCCCCC
Q 002174 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~ 781 (956)
+||+|.++++..+ .+++..+..++.||+.||+|||+++ ||||||||+|||++.+| .+||+|||+|+........
T Consensus 133 ~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 133 EGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp TTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred CCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 9999999997653 5899999999999999999999999 99999999999999988 6999999999876533211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC--
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM-- 859 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 859 (956)
. .........||+.|||||++.+..|+.++|||||||++|||+||+.||....... .+..+.....
T Consensus 208 ~--~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~----------~~~~i~~~~~~~ 275 (336)
T 4g3f_A 208 K--SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP----------LCLKIASEPPPI 275 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC----------CHHHHHHSCCGG
T ss_pred c--ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH----------HHHHHHcCCCCc
Confidence 0 0112234579999999999999999999999999999999999999997533211 1111111111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
...++.++..+.+++.+||+.||.+||++.|+++.+....
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 2346677888999999999999999999999999888664
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-50 Score=433.76 Aligned_cols=254 Identities=22% Similarity=0.313 Sum_probs=195.3
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999964 699999999875432 23467999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+ +|+|.+++..++ .+++..++.++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 789999997653 5899999999999999999999999 999999999999999999999999999865422
Q ss_pred CCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......||+.|||||++.+..+ +.++||||+||++|||+||+.||..... ....
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~~~---------------- 221 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PVLF---------------- 221 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHH----------------
T ss_pred -------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HHHH----------------
Confidence 22344679999999999998876 5789999999999999999999965321 1111
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+.+..+.-.-| ...++.+.+|+.+||+.||++|+|++|+|+||||+.
T Consensus 222 -------------~~i~~~~~~~p--------------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~ 268 (275)
T 3hyh_A 222 -------------KNISNGVYTLP--------------------KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp -------------HHHHHTCCCCC--------------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred -------------HHHHcCCCCCC--------------------CCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence 11111100000 011223347888999999999999999999999987
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
+..
T Consensus 269 ~~p 271 (275)
T 3hyh_A 269 DLP 271 (275)
T ss_dssp TCC
T ss_pred CCC
Confidence 653
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=8.7e-50 Score=431.15 Aligned_cols=253 Identities=27% Similarity=0.442 Sum_probs=198.5
Q ss_pred CCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeeccccc----CCcEEEEE
Q 002174 627 NSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQMLVY 699 (956)
Q Consensus 627 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~LV~ 699 (956)
+..++||+|+||+||+|.+. +++.||+|++... .....+.|.+|++++++++|||||+++++|.+ ++..+|||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999975 6899999998653 23345679999999999999999999999854 35689999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccccCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~ 778 (956)
|||++|+|.+++++.. .+++..+..|+.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT-
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC-
Confidence 9999999999997653 5889999999999999999999875 46999999999999985 79999999999986432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......||+.|||||++.+ .|+.++|||||||++|||+||+.||....+........ ..+.
T Consensus 185 --------~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i---------~~~~ 246 (290)
T 3fpq_A 185 --------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV---------TSGV 246 (290)
T ss_dssp --------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH---------TTTC
T ss_pred --------CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHH---------HcCC
Confidence 12345679999999998865 69999999999999999999999997544332211110 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
. | +... +...+.+.+|+.+||..||++|||++|+|+||||+.
T Consensus 247 ~---~----------------------~~~~-------------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 247 K---P----------------------ASFD-------------KVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp C---C----------------------GGGG-------------GCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred C---C----------------------CCCC-------------ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 0 0 0000 001122346788889999999999999999999976
Q ss_pred C
Q 002174 939 D 939 (956)
Q Consensus 939 ~ 939 (956)
+
T Consensus 289 ~ 289 (290)
T 3fpq_A 289 E 289 (290)
T ss_dssp -
T ss_pred C
Confidence 4
No 12
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-49 Score=442.41 Aligned_cols=271 Identities=25% Similarity=0.422 Sum_probs=225.5
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCC------CcEEEEEEecCCChh-hHHHHHHHHHHHHhcCC-Cceeee
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHH-RNLVSL 685 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h-~nIv~l 685 (956)
+...+|++..++|++.+.||+|+||+||+|.+.. ++.||||+++..... ..+.|.+|+++|++++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4455677888999999999999999999998642 468999999865443 35689999999999965 899999
Q ss_pred ecccccC-CcEEEEEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccC
Q 002174 686 VGYCDEE-GEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 750 (956)
Q Consensus 686 ~~~~~~~-~~~~LV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 750 (956)
+|+|.+. +..++|||||++|+|.++|+... ...+++..++.++.|||+||+|||+++ |||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCc
Confidence 9998664 57899999999999999997532 345899999999999999999999999 99999
Q ss_pred CCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CC
Q 002174 751 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 829 (956)
Q Consensus 751 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~ 829 (956)
|||+|||+++++.+||+|||+|+...... .........||+.|||||++.+..|+.++|||||||++|||+| |+
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~-----~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~ 285 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDP-----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCT-----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSC
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCC-----CceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCC
Confidence 99999999999999999999998764332 1223345679999999999999999999999999999999998 89
Q ss_pred CCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 830 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 830 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.||........... .+..+.....|+.+++++.+++..||+.+|++||++.++++.|+++.+.
T Consensus 286 ~Pf~~~~~~~~~~~---------~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 286 SPYPGVKIDEEFCR---------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp CSSTTCCCSHHHHH---------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHH---------HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 99975432221111 1223344566777889999999999999999999999999999988654
No 13
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-50 Score=439.72 Aligned_cols=200 Identities=27% Similarity=0.359 Sum_probs=170.2
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++|++.+.||+|+||+||+|+.. .++.||||+++.... .....+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999852 478999999875332 223468889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|||||+||+|.+++.+.. .+++..+..++.||+.||+|||+++ ||||||||+|||+++++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999997654 5899999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
.. .......||+.|||||++.+..|+.++||||+||++|||+||+.||...
T Consensus 179 ~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 179 HE-------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp ---------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CC-------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 21 2234567999999999999999999999999999999999999999754
No 14
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.5e-48 Score=437.01 Aligned_cols=303 Identities=19% Similarity=0.276 Sum_probs=212.6
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 695 (956)
...++|++.++||+|+||+||+|+.+ .++.||||++.... ...++.+|+++++.+ +||||+++++++.+.++.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 34688999999999999999999853 46899999987543 345788999999998 699999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeeccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRL 774 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla~~ 774 (956)
++||||+++|+|.+++. .+++.+++.++.|++.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.
T Consensus 96 ~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 99999999999999983 3888999999999999999999999 9999999999999877 7999999999986
Q ss_pred cCCCCCCCc---------------------cccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCC
Q 002174 775 APVPDIEGI---------------------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPI 832 (956)
Q Consensus 775 ~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf 832 (956)
......... ..........||+.|||||++.+. .|+.++||||+||++|||++|+.||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 168 THDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp CTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred cCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 543221100 001122345799999999999875 5899999999999999999999999
Q ss_pred CCCchhHHHHHHHhhccc----------chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 833 SHGKNIVREVNIAYQSSM----------MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
..+.+..++......... ....... ....|......+.+.+...-... |....-...........
T Consensus 248 ~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~----p~~~~~~~~~~~~~~~~ 322 (361)
T 4f9c_A 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILC-SKEVPAQDLRKLCERLRGMDSST----PKLTSDIQGHATNLEGW 322 (361)
T ss_dssp SCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEE-SSCCCCCCHHHHHHHHC--------------------------C
T ss_pred CCCCCHHHHHHHHHHhcCCccchhhhhhccccccc-cccCcchhhhHHHHhhccccccc----ccccccccccccccccc
Confidence 877665444332211000 0000000 00111111111111111111111 11111111111111223
Q ss_pred CCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 903 PESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 903 ~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+..++.+.|||.+||++||++|+||+|||+||||.+
T Consensus 323 ~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 323 NEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp TTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred ccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 344556789999999999999999999999999975
No 15
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-48 Score=438.72 Aligned_cols=287 Identities=22% Similarity=0.365 Sum_probs=215.5
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccc------cCCc
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD------EEGE 694 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~------~~~~ 694 (956)
++|++.+.||+|+||+||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||++++++. +.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999975 79999999997533 334567889999999999999999999864 3467
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.|||||||+ |+|.+++... ..+++..+..++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999995 7899999654 46999999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
+...... .........||+.|||||++.+. .++.++||||+||++|||++|+.||...... +........
T Consensus 208 ~~~~~~~---~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~----- 278 (398)
T 4b99_A 208 LCTSPAE---HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMV----- 278 (398)
T ss_dssp C----------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHH-----
T ss_pred cccCccc---cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHh-----
Confidence 6432211 12233456899999999998875 5689999999999999999999999755432 222221110
Q ss_pred hccCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCC
Q 002174 854 VIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
.+.++......+ .......+...|...|.. +...++..++.+.|||.+||+.||++|+||+|+|+
T Consensus 279 -----~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 279 -----LGTPSPAVIQAVGAERVRAYIQSLPPRQPVP---------WETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -----HCCCCGGGTC-----CHHHHHHSSCCCCCCC---------HHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----cCCCChHHhhhhhhhhhhhhhhcCCCcCCCC---------HHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 011111110000 001112222334333321 11234555667789999999999999999999999
Q ss_pred CCcccCC
Q 002174 933 HPYVSSD 939 (956)
Q Consensus 933 HP~f~~~ 939 (956)
||||+.-
T Consensus 345 Hp~f~~~ 351 (398)
T 4b99_A 345 HPFLAKY 351 (398)
T ss_dssp SGGGTTT
T ss_pred CHhhCcC
Confidence 9999753
No 16
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-47 Score=418.45 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=200.0
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC----cEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~LV~ 699 (956)
.+|.+.++||+|+||+||+|++ +|+.||||+++.... ....+..|+..+.+++|||||+++|+|.+++ ..+|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3567788999999999999998 589999999975322 2223345666677889999999999997653 579999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-----CCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-----ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
|||++|+|.++++.. ++++..+.+++.|+++||+|||++ ..++||||||||+|||++.++++||+|||+|+.
T Consensus 81 Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 157 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp ECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcc
Confidence 999999999999764 489999999999999999999987 234599999999999999999999999999987
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccC------CCCCcccEeehHHHHHHHHhCCCCCCCCch-----------
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTGMQPISHGKN----------- 837 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlG~ll~elltg~~pf~~~~~----------- 837 (956)
....... .........||+.|||||++.+. .++.++|||||||++|||+||+.||.....
T Consensus 158 ~~~~~~~---~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 158 HDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp EETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred ccCCCCc---eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 6432211 11122345799999999999764 467799999999999999999877642211
Q ss_pred --hHHHHHHHhhcccchhhccCCCCC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 838 --IVREVNIAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 838 --~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
........... ....+..+. .+.+++..+.+++.+||+.+|++||+|.++++.|+++.+
T Consensus 235 ~~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 235 DPSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SCCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 11111111100 011111111 123577889999999999999999999999999998764
No 17
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1e-47 Score=418.92 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=190.8
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCC--------
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-------- 693 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-------- 693 (956)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999965 699999999875433 34568999999999999999999999986543
Q ss_pred ----cEEEEEecCCCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002174 694 ----EQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 694 ----~~~LV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
..|+|||||++|+|.+++..... ...++..++.|+.||++||+|||+++ ||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence 36999999999999999976543 23455668899999999999999999 99999999999999999999999
Q ss_pred eccccccCCCCCCCcc-----ccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHH
Q 002174 769 FGLSRLAPVPDIEGIV-----PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 843 (956)
Q Consensus 769 fGla~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~ 843 (956)
||+|+........... .........||+.|||||++.+..|+.++|||||||++|||++ ||....+......
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~ 238 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence 9999876543211110 0112234579999999999999999999999999999999996 7753221111100
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCC
Q 002174 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 923 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~ 923 (956)
.+.. ..+|+. ..+. .+...+|+.+||+.||++
T Consensus 239 ---------~~~~---~~~p~~----------------------~~~~--------------~~~~~~li~~~L~~dP~~ 270 (299)
T 4g31_A 239 ---------DVRN---LKFPPL----------------------FTQK--------------YPCEYVMVQDMLSPSPME 270 (299)
T ss_dssp ---------HHHT---TCCCHH----------------------HHHH--------------CHHHHHHHHHHTCSSGGG
T ss_pred ---------HHhc---CCCCCC----------------------Cccc--------------CHHHHHHHHHHcCCChhH
Confidence 0000 011110 0000 011236888899999999
Q ss_pred CCCCcCCCCCCcccCC
Q 002174 924 PPSSSSMLKHPYVSSD 939 (956)
Q Consensus 924 R~sa~e~L~HP~f~~~ 939 (956)
|||++|+|+||||.+-
T Consensus 271 Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 271 RPEAINIIENAVFEDL 286 (299)
T ss_dssp SCCHHHHHTSGGGCCC
T ss_pred CcCHHHHhcCHhhCCC
Confidence 9999999999999753
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.3e-45 Score=432.29 Aligned_cols=260 Identities=22% Similarity=0.349 Sum_probs=213.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||+||+|..+ +|+.||+|++........+.+.+|+++|+.++||||+++++++.+++..+|||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 368999999999999999999975 6999999999876666677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC--CcEEEEeeccccccCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--FTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~--~~~kl~DfGla~~~~~~~ 779 (956)
|+||+|.+++... ...+++.++..++.||+.||+|||+++ |+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 236 MSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp CCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred cCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence 9999999999653 345999999999999999999999999 9999999999999854 89999999999876432
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|||||++.+..|+.++||||+||++|||++|+.||........ ... +.....
T Consensus 311 -------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~-~~~---------i~~~~~ 373 (573)
T 3uto_A 311 -------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDET-LRN---------VKSCDW 373 (573)
T ss_dssp -------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH---------HHTTCC
T ss_pred -------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH-HHH---------HHhCCC
Confidence 223455799999999999999999999999999999999999999975433111 110 000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
.++ +. .++..++.+.+||.+||+.||++|+|++|+|+||||+..
T Consensus 374 -~~~------------------~~-----------------~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~ 417 (573)
T 3uto_A 374 -NMD------------------DS-----------------AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417 (573)
T ss_dssp -CCC------------------SG-----------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred -CCC------------------cc-----------------cccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCC
Confidence 000 00 011123334589999999999999999999999999754
Q ss_pred C
Q 002174 940 V 940 (956)
Q Consensus 940 ~ 940 (956)
.
T Consensus 418 ~ 418 (573)
T 3uto_A 418 N 418 (573)
T ss_dssp C
T ss_pred C
Confidence 3
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6e-45 Score=428.31 Aligned_cols=198 Identities=27% Similarity=0.392 Sum_probs=171.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHH---HHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLT---EIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~---E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.++||+|+||+||+|+.. +|+.||||++..... .....+.+ ++++++.++|||||+++++|.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999975 699999999864322 11223333 46677778999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
|||||||+||+|.+++...+ .+++..++.++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+..
T Consensus 268 ylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 99999999999999997654 4899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCC
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
... .....+||+.|||||++.. ..|+.++||||+||++|||++|+.||..
T Consensus 343 ~~~---------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 343 SKK---------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp SSC---------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred CCC---------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 432 1234579999999999975 5799999999999999999999999964
No 20
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.2e-42 Score=374.31 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=212.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||+||+|.. .+++.||||++........+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999996 47899999998765555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.+++... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 170 (297)
T 3fxz_A 99 LAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (297)
T ss_dssp CTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred CCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence 9999999999764 4889999999999999999999999 9999999999999999999999999998654322
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............... . .....
T Consensus 171 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~-~-------~~~~~ 237 (297)
T 3fxz_A 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-G-------TPELQ 237 (297)
T ss_dssp -----CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH-C-------SCCCS
T ss_pred -----cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-C-------CCCCC
Confidence 1223456999999999999999999999999999999999999999754432211110000 0 00000
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
.+..+ .....+++.+||..||++|||++|+|+||||.....
T Consensus 238 ~~~~~---------------------------------------~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 238 NPEKL---------------------------------------SAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp CGGGS---------------------------------------CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred Ccccc---------------------------------------CHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 01100 111236788889999999999999999999987665
Q ss_pred CC
Q 002174 942 GS 943 (956)
Q Consensus 942 ~~ 943 (956)
-+
T Consensus 279 ~~ 280 (297)
T 3fxz_A 279 LS 280 (297)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.5e-42 Score=381.40 Aligned_cols=285 Identities=43% Similarity=0.752 Sum_probs=233.6
Q ss_pred ccCCcccccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeee
Q 002174 607 KIDGVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSL 685 (956)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l 685 (956)
.......+++.++....++|++.+.||+|+||+||+|...+++.||||++...... ....+.+|++++++++||||+++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~ 92 (326)
T 3uim_A 13 HLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRL 92 (326)
T ss_dssp --CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCC
T ss_pred ccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccce
Confidence 34456778999999999999999999999999999999888999999998764332 23478999999999999999999
Q ss_pred ecccccCCcEEEEEecCCCCCHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002174 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 686 ~~~~~~~~~~~LV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
++++...+..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+...++|+||||||+||+++.++.
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~ 172 (326)
T 3uim_A 93 RGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172 (326)
T ss_dssp CEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCC
T ss_pred EEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCC
Confidence 999999999999999999999999998643 345899999999999999999999992223999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCC-------Cc
Q 002174 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH-------GK 836 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~-------~~ 836 (956)
+||+|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.. ..
T Consensus 173 ~kl~Dfg~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 246 (326)
T 3uim_A 173 AVVGDFGLAKLMDYKD------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246 (326)
T ss_dssp EEECCCSSCEECCSSS------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCS
T ss_pred EEeccCccccccCccc------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccch
Confidence 9999999998764322 2233445699999999999999999999999999999999999999952 11
Q ss_pred hhHHHHHHHhhcccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002174 837 NIVREVNIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
...++..............+... ...+.+.+..+.+++..|++.+|.+||++.++++.|+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp BHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 12233322222333333333332 35678899999999999999999999999999999985
No 22
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.4e-42 Score=382.62 Aligned_cols=256 Identities=24% Similarity=0.334 Sum_probs=207.3
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++.+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 45799999999999999999997 57999999998753 3334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 9999999999997653 4889999999999999999999999 999999999999999999999999999765422
Q ss_pred CCCccccceecccccCCCcccccccccCCCC-CcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......||+.|+|||++.+..+. .++||||+||++|||++|+.||..... .....
T Consensus 168 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-~~~~~--------------- 224 (328)
T 3fe3_A 168 -------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL-KELRE--------------- 224 (328)
T ss_dssp -------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHH---------------
T ss_pred -------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH-HHHHH---------------
Confidence 123455799999999999988775 789999999999999999999965432 11111
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
.+.......|. ...+...+++.+||..||++|||++|+++||||..
T Consensus 225 --------------~i~~~~~~~p~--------------------~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~ 270 (328)
T 3fe3_A 225 --------------RVLRGKYRIPF--------------------YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270 (328)
T ss_dssp --------------HHHHCCCCCCT--------------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTT
T ss_pred --------------HHHhCCCCCCC--------------------CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcC
Confidence 00000000010 01122346888889999999999999999999976
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
...
T Consensus 271 ~~~ 273 (328)
T 3fe3_A 271 GHE 273 (328)
T ss_dssp TCT
T ss_pred CCc
Confidence 543
No 23
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.5e-42 Score=378.68 Aligned_cols=278 Identities=43% Similarity=0.718 Sum_probs=231.6
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 616 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
+.++...+++|++.+.||+|+||+||+|.+++++.||||++........+.+.+|++++++++||||+++++++.+.+..
T Consensus 31 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 110 (321)
T 2qkw_B 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEM 110 (321)
T ss_dssp CSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCC
T ss_pred HHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeE
Confidence 34445577899999999999999999999888999999998876666667899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 187 (321)
T 2qkw_B 111 ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK 187 (321)
T ss_dssp EEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccc
Confidence 99999999999999996543 235899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch-----hHHHHHHHhhc
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-----IVREVNIAYQS 848 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~-----~~~~~~~~~~~ 848 (956)
...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+.......
T Consensus 188 ~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~ 262 (321)
T 2qkw_B 188 KGTELD-----QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN 262 (321)
T ss_dssp ECSSSS-----CCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT
T ss_pred cccccc-----ccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc
Confidence 654222 11222345689999999999999999999999999999999999999964321 22222222223
Q ss_pred ccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 849 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 849 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
..+...+++.. ...+.+++..+.+++.+||+.+|++||++.++++.|+.+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 263 GQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp TCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 33334444433 345788999999999999999999999999999999988653
No 24
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.8e-42 Score=379.14 Aligned_cols=276 Identities=25% Similarity=0.352 Sum_probs=209.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||+||+|...+|+.||+|++...... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4689999999999999999999988999999998754322 24678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++ |+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 100 FME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp CCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred CCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 996 5898888654 345899999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...........
T Consensus 174 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~---------------- 231 (311)
T 3niz_A 174 ------RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPK---------------- 231 (311)
T ss_dssp ------C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHH----------------
T ss_pred ------ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHH----------------
Confidence 12234568999999999976 5689999999999999999999999975433211111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH---------HhHhhCCCCCCCCcccccccCCCCCCCCCCCcCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE---------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 930 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~---------~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~ 930 (956)
+...+-...|...|...++....+ .+....+.......+|+.+||..||++|||++|+
T Consensus 232 -------------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 232 -------------IFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp -------------HHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred -------------HHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 011111111111111111000000 0011122333445689999999999999999999
Q ss_pred CCCCcccCC
Q 002174 931 LKHPYVSSD 939 (956)
Q Consensus 931 L~HP~f~~~ 939 (956)
|+||||.+-
T Consensus 299 l~hp~f~~~ 307 (311)
T 3niz_A 299 MNHPYFKDL 307 (311)
T ss_dssp HTSGGGTTS
T ss_pred hcCcccccC
Confidence 999999764
No 25
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.5e-42 Score=395.89 Aligned_cols=270 Identities=23% Similarity=0.272 Sum_probs=212.4
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHHHHhcCCCceeeeeccc
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYC 689 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~ 689 (956)
+.+.++....++|++.++||+|+||+||+|+.+ +++.||+|+++...... ...+.+|..++..++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345566677899999999999999999999976 58999999987532211 23478899999999999999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002174 690 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
.+.+..++||||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ ||||||||+|||++.++.+||+||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DF 219 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADF 219 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcch
Confidence 9999999999999999999999763 345899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccc-----cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 844 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~ 844 (956)
|+|+...... ........||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...
T Consensus 220 Gla~~~~~~~------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~ 292 (437)
T 4aw2_A 220 GSCLKLMEDG------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGK 292 (437)
T ss_dssp TTCEECCTTS------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH
T ss_pred hhhhhcccCC------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHh
Confidence 9997654322 12233457999999999997 46789999999999999999999999975432111 110
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCC
Q 002174 845 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCC-QDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 923 (956)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~-~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~ 923 (956)
++.... -.-|.. .+...+.+.+||++||..+|++
T Consensus 293 ----------------------------i~~~~~~~~~p~~-----------------~~~~s~~~~dLi~~lL~~~~~r 327 (437)
T 4aw2_A 293 ----------------------------IMNHKERFQFPTQ-----------------VTDVSENAKDLIRRLICSREHR 327 (437)
T ss_dssp ----------------------------HHTHHHHCCCCSS-----------------CCCSCHHHHHHHHTTSSCGGGC
T ss_pred ----------------------------hhhccccccCCcc-----------------cccCCHHHHHHHHHHhcccccc
Confidence 000000 000110 0112233457888888888888
Q ss_pred --CCCCcCCCCCCcccCC
Q 002174 924 --PPSSSSMLKHPYVSSD 939 (956)
Q Consensus 924 --R~sa~e~L~HP~f~~~ 939 (956)
|++++|+++||||++-
T Consensus 328 ~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 328 LGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp TTTTTTHHHHTSGGGTTC
T ss_pred cCCCCHHHHhCCCccCCC
Confidence 8999999999999753
No 26
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.5e-42 Score=383.92 Aligned_cols=204 Identities=24% Similarity=0.394 Sum_probs=170.7
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
..++|++.+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 457899999999999999999996 47999999998764322 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 88 E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 9999999999997654 4889999999999999999999999 9999999999999999999999999987643221
Q ss_pred CCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
........||+.|+|||++.+..+ +.++||||+||++|||++|+.||....
T Consensus 163 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 214 (347)
T 3zgw_A 163 ------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214 (347)
T ss_dssp ---------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 122344579999999999998775 889999999999999999999997543
No 27
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.1e-41 Score=378.52 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=209.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh------hHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.+.||+|+||+||+|... +|+.||+|+++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467999999999999999999975 6899999998754322 246789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC----cEEEEeecc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DfGl 771 (956)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 9999999999999999653 45899999999999999999999999 99999999999998877 799999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 166 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~-~~~------- 229 (361)
T 2yab_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN------- 229 (361)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-------
T ss_pred ceEcCCCC--------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-------
Confidence 98764321 12345699999999999999999999999999999999999999975432111 110
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
+... ...++... ++.....+.+||.+||..||++|||++|+|
T Consensus 230 --i~~~-~~~~~~~~-----------------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~e~l 271 (361)
T 2yab_A 230 --ITAV-SYDFDEEF-----------------------------------FSQTSELAKDFIRKLLVKETRKRLTIQEAL 271 (361)
T ss_dssp --HHTT-CCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred --HHhc-CCCCCchh-----------------------------------ccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence 0000 01111111 011222345789999999999999999999
Q ss_pred CCCcccC
Q 002174 932 KHPYVSS 938 (956)
Q Consensus 932 ~HP~f~~ 938 (956)
+||||..
T Consensus 272 ~hp~~~~ 278 (361)
T 2yab_A 272 RHPWITP 278 (361)
T ss_dssp TSTTTSC
T ss_pred cCcCcCC
Confidence 9999975
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.6e-41 Score=372.93 Aligned_cols=270 Identities=22% Similarity=0.322 Sum_probs=215.2
Q ss_pred ccccHHHHHHHhcC----------CCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCC
Q 002174 612 RSFTYGEMALATNN----------FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR 680 (956)
Q Consensus 612 ~~~~~~~~~~~~~~----------~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 680 (956)
+.++++++..+++. |+..+.||+|+||.||+|... +|+.||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45777787777754 666789999999999999976 7999999999866655667899999999999999
Q ss_pred ceeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC
Q 002174 681 NLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH 760 (956)
Q Consensus 681 nIv~l~~~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~ 760 (956)
||+++++++...+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~ 176 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTL 176 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECC
Confidence 999999999999999999999999999999864 35899999999999999999999999 999999999999999
Q ss_pred CCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHH
Q 002174 761 KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 840 (956)
Q Consensus 761 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~ 840 (956)
++.+||+|||++....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 177 ~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~ 249 (321)
T 2c30_A 177 DGRVKLSDFGFCAQISKDV-------PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQA 249 (321)
T ss_dssp TCCEEECCCTTCEECCSSS-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred CCcEEEeeeeeeeecccCc-------cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999999999998654321 112345699999999999999999999999999999999999999975432111
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCC
Q 002174 841 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSK 920 (956)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~d 920 (956)
.... .... .|... .. ....+...+++.+||..|
T Consensus 250 -~~~~---------~~~~----------------------~~~~~-~~--------------~~~~~~l~~li~~~l~~d 282 (321)
T 2c30_A 250 -MKRL---------RDSP----------------------PPKLK-NS--------------HKVSPVLRDFLERMLVRD 282 (321)
T ss_dssp -HHHH---------HHSS----------------------CCCCT-TG--------------GGSCHHHHHHHHHHSCSS
T ss_pred -HHHH---------hcCC----------------------CCCcC-cc--------------ccCCHHHHHHHHHHccCC
Confidence 1000 0000 00000 00 000112236788889999
Q ss_pred CCCCCCCcCCCCCCcccCCCC
Q 002174 921 EETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 921 P~~R~sa~e~L~HP~f~~~~~ 941 (956)
|++|||++|+++||||.....
T Consensus 283 p~~Rps~~ell~hp~~~~~~~ 303 (321)
T 2c30_A 283 PQERATAQELLDHPFLLQTGL 303 (321)
T ss_dssp TTTSCCHHHHHTSGGGGGCCC
T ss_pred hhhCcCHHHHhcChhhccCCC
Confidence 999999999999999976543
No 29
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.7e-41 Score=374.76 Aligned_cols=295 Identities=30% Similarity=0.502 Sum_probs=246.5
Q ss_pred CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC-CCCCceeecCCCCCCCcceeeEEEeCCCCccc--cCCcCccCCCC
Q 002174 31 ITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCT-SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSG--NLSPEIGRLSY 107 (956)
Q Consensus 31 ~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~-~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~--~~~~~l~~l~~ 107 (956)
.|.+.|++||++||+++.++. .+.+|..+++|| +.|.||+|...+ ...+++.|+|+++++++ .+|+.|+++++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~---~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~ 77 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDT---QTYRVNNLDLSGLNLPKPYPIPSSLANLPY 77 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSS---SCCCEEEEEEECCCCSSCEECCGGGGGCTT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCC---CCceEEEEECCCCCccCCcccChhHhCCCC
Confidence 588999999999999998765 688998765554 359999996532 22589999999999999 89999999999
Q ss_pred CCEEEccC-CCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecc
Q 002174 108 LTILDFMW-NKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (956)
Q Consensus 108 L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (956)
|++|+|++ |++.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|.+++.+|..|.++++|++|+|+
T Consensus 78 L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 157 (313)
T 1ogq_A 78 LNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD 157 (313)
T ss_dssp CSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECC
T ss_pred CCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECc
Confidence 99999995 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccCCCccccCCcc-ccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCcc
Q 002174 187 NNSISGQIPPELSRLP-SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (956)
Q Consensus 187 ~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (956)
+|++++.+|..+..++ +|++|+|++|++++.+|..+..++ |+.|+|++|.+++ ..|..|.++++|+.|+|++|.+++
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEG-DASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEE-CCGGGCCTTSCCSEEECCSSEECC
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccC-cCCHHHhcCCCCCEEECCCCceee
Confidence 9999999999999998 999999999999988898888887 8899999998886 577888888888888888888887
Q ss_pred CCCCCCCCCCccEEEccCCcCCCCCCCCCCcc-ccCEEEccCCcCCCCcchhcCCCCcCCeEeccccc
Q 002174 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332 (956)
Q Consensus 266 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 332 (956)
.++.+..+++|++|+|++|++++.+|..+... +|++|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 236 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred ecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 77767777777777777777766666544332 5666666666666555554 556666666666665
No 30
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.5e-42 Score=374.59 Aligned_cols=276 Identities=24% Similarity=0.392 Sum_probs=210.5
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 57889999999999999999975 689999999875332 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++ |++.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 155 (292)
T 3o0g_A 82 FCD-QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV- 155 (292)
T ss_dssp CCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCC-
T ss_pred cCC-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCcc-
Confidence 996 5776766543 345899999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCccccceecccccCCCcccccccccCC-CCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+.. ++.++|||||||++|||++|..||....+..+.......
T Consensus 156 ------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~------------ 217 (292)
T 3o0g_A 156 ------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR------------ 217 (292)
T ss_dssp ------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH------------
T ss_pred ------ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH------------
Confidence 2223456899999999998765 899999999999999999999998766554433332211
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH--------HHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE--------LESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~--------L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
.+-...+...+.+.+.... ........+..+....+|+.+||+.||++|||++|+|
T Consensus 218 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 281 (292)
T 3o0g_A 218 ----------------LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281 (292)
T ss_dssp ----------------HHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ----------------HhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHh
Confidence 1111111111111100000 0000111222333446899999999999999999999
Q ss_pred CCCcccCC
Q 002174 932 KHPYVSSD 939 (956)
Q Consensus 932 ~HP~f~~~ 939 (956)
+||||++-
T Consensus 282 ~hp~f~~~ 289 (292)
T 3o0g_A 282 QHPYFSDF 289 (292)
T ss_dssp TSGGGTTC
T ss_pred cCcccccC
Confidence 99999863
No 31
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6e-41 Score=379.40 Aligned_cols=262 Identities=25% Similarity=0.478 Sum_probs=217.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC--------CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeecccccC
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 692 (956)
.++|++.+.||+|+||+||+|.+. ++..||||+++.... ...+.+.+|+++++++ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 468889999999999999999852 356899999976533 3456899999999999 899999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002174 693 GEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
+..++||||+++|+|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997643 235789999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCch
Q 002174 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 837 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~ 837 (956)
+.++.+||+|||+++........ .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYY-----KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTT-----CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred CCCCCEEEccccCCcccCcccce-----ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999866433211 11233457789999999999999999999999999999999 9999975432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
. +... .+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++....
T Consensus 312 ~-~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 312 E-ELFK---------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp G-GHHH---------HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred H-HHHH---------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 1 1111 12223334456677889999999999999999999999999999987653
No 32
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=382.49 Aligned_cols=203 Identities=26% Similarity=0.405 Sum_probs=173.4
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 696 (956)
..++|++.+.||+|+||+||+|+.. +++.||||+++... ....+.+.+|.++++.+ +||||+++++++.+.+..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 4578999999999999999999975 68999999987532 22345678899999988 6999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 101 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~ 175 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGI 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecc
Confidence 9999999999999997653 4889999999999999999999999 9999999999999999999999999998533
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 176 ~~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 228 (353)
T 3txo_A 176 CN-------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN 228 (353)
T ss_dssp C----------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cC-------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC
Confidence 21 122345679999999999999999999999999999999999999997543
No 33
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.7e-41 Score=376.42 Aligned_cols=241 Identities=24% Similarity=0.299 Sum_probs=194.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 367889999999999999999975 69999999987532 22345788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99999999999997643 4889999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...... .. .
T Consensus 159 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i---------~~-~ 220 (337)
T 1o6l_A 159 G-------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELI---------LM-E 220 (337)
T ss_dssp T-------CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH---------HH-C
T ss_pred C-------CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH-HHHHHH---------Hc-C
Confidence 1 1234457999999999999999999999999999999999999999754321 111111 11 1
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARP 886 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP 886 (956)
...+|...+..+.+++.+|++.+|.+||
T Consensus 221 ~~~~p~~~s~~~~~li~~lL~~dP~~R~ 248 (337)
T 1o6l_A 221 EIRFPRTLSPEAKSLLAGLLKKDPKQRL 248 (337)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHHHhc
Confidence 1123444455566666666666666665
No 34
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=2.5e-41 Score=385.83 Aligned_cols=307 Identities=19% Similarity=0.216 Sum_probs=212.5
Q ss_pred hcCCCCCCeeeee--CCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 623 TNNFNSSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+| +||+||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999976 69999999987543 3334678889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998776667999999999999999999999999 99999999999999999999999999865432
Q ss_pred CCCCCccccceecccccCCCccccccccc--CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
................||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............. .......
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~ 258 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLL 258 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCccc
Confidence 21111111112233468999999999987 6799999999999999999999999975433221111000 0000000
Q ss_pred cCCCCCCChHHH-H----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCC
Q 002174 856 DGNMGSYPSECV-E----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 930 (956)
Q Consensus 856 ~~~~~~~~~~~~-~----~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~ 930 (956)
+.. ..+.+.. . ................||...+.. ........++...+|+.+||+.||++|||++|+
T Consensus 259 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el 331 (389)
T 3gni_B 259 DTS--TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSP-----SHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL 331 (389)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred ccc--ccccccccccccccccccccccccccCccccccCCCC-----CCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 000 0000000 0 000000000000001111111000 000112223445689999999999999999999
Q ss_pred CCCCcccCCCC
Q 002174 931 LKHPYVSSDVS 941 (956)
Q Consensus 931 L~HP~f~~~~~ 941 (956)
|+||||.....
T Consensus 332 l~hp~f~~~~~ 342 (389)
T 3gni_B 332 LNHSFFKQIKR 342 (389)
T ss_dssp TTSGGGGGC--
T ss_pred hcCHHHHHHhh
Confidence 99999976543
No 35
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.8e-41 Score=382.83 Aligned_cols=301 Identities=19% Similarity=0.250 Sum_probs=226.4
Q ss_pred CcccccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-----CCcee
Q 002174 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----HRNLV 683 (956)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~nIv 683 (956)
....+++.+.....++|++.++||+|+||+||+|... +++.||||++.. .....+.+..|+++++.++ ||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv 99 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIV 99 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCee
Confidence 4556777788888899999999999999999999974 689999999974 3344557788999999996 99999
Q ss_pred eeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---
Q 002174 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--- 760 (956)
Q Consensus 684 ~l~~~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--- 760 (956)
++++++...+..++||||+ +++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 100 ~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~ 175 (360)
T 3llt_A 100 KYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYF 175 (360)
T ss_dssp CEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTC
T ss_pred cccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccc
Confidence 9999999999999999999 999999998876667999999999999999999999999 999999999999975
Q ss_pred ----------------------CCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeeh
Q 002174 761 ----------------------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSL 818 (956)
Q Consensus 761 ----------------------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSl 818 (956)
++.+||+|||+|+..... .....||+.|+|||++.+..++.++|||||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 245 (360)
T 3llt_A 176 EKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----------HGSIINTRQYRAPEVILNLGWDVSSDMWSF 245 (360)
T ss_dssp CEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----------CCSCCSCGGGCCHHHHTTCCCCTTHHHHHH
T ss_pred cccccchhcccccccccccccCCCCEEEEeccCceecCCC----------CcCccCcccccCcHHHcCCCCCCccchHHH
Confidence 789999999999864321 234568999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHH-H------hcccCCCCCCCHHHH
Q 002174 819 GVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLAL-K------CCQDETDARPSMSEV 891 (956)
Q Consensus 819 G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~------c~~~~p~~RPs~~~v 891 (956)
||++|||++|+.||............ .......|............ . .....|.........
T Consensus 246 G~il~ell~g~~pf~~~~~~~~~~~~-----------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 314 (360)
T 3llt_A 246 GCVLAELYTGSLLFRTHEHMEHLAMM-----------ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSI 314 (360)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHH-----------HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHH
T ss_pred HHHHHHHHHCCCCCCCCcHHHHHHHH-----------HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhh
Confidence 99999999999999765432221111 01112233332222111000 0 001112222222221
Q ss_pred HHHHHHhHhh-CCCCCCCCcccccccCCCCCCCCCCCcCCCCCCccc
Q 002174 892 MRELESIWNM-MPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 892 ~~~L~~~~~~-~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
. .+...... ....++...+|+.+||+.||++|||++|+|+||||.
T Consensus 315 ~-~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 315 K-HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp H-HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred h-hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 1 11111000 011223445899999999999999999999999995
No 36
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.4e-41 Score=371.16 Aligned_cols=275 Identities=23% Similarity=0.353 Sum_probs=205.7
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
++|++.+.||+|+||+||+|...+++.||+|++...... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 578899999999999999999988999999998754332 236788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ ++|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (288)
T 1ob3_A 82 LD-QDLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV-- 154 (288)
T ss_dssp CS-EEHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCccc--
Confidence 96 5999998754 245889999999999999999999999 9999999999999999999999999998654221
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ..
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~-~~------------- 215 (288)
T 1ob3_A 155 -----RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI-FR------------- 215 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HH-------------
T ss_pred -----cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HH-------------
Confidence 12234468999999999976 45899999999999999999999999765432221111 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH--------HHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCC
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL--------ESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L--------~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
..-...+...|...+....- ..+....+..+....+++.+||..||++|||++|+|+
T Consensus 216 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 216 ---------------ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp ---------------HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---------------HHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00000000011100000000 0000111222334458999999999999999999999
Q ss_pred CCcccCC
Q 002174 933 HPYVSSD 939 (956)
Q Consensus 933 HP~f~~~ 939 (956)
||||.+.
T Consensus 281 hp~f~~~ 287 (288)
T 1ob3_A 281 HAYFKEN 287 (288)
T ss_dssp SGGGGC-
T ss_pred Ccchhhc
Confidence 9999753
No 37
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.4e-41 Score=386.01 Aligned_cols=209 Identities=22% Similarity=0.307 Sum_probs=180.2
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002174 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 616 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
..++....++|++.+.||+|+||+||+|+.. +++.||+|+++..... ..+.+.+|+++++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566789999999999999999999976 5899999998642211 12357889999999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
++..++||||+++|+|.++++.. .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~ 214 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 214 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccce
Confidence 99999999999999999999753 4788999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCC----CCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
|+...... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||....
T Consensus 215 a~~~~~~~------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 277 (410)
T 3v8s_A 215 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 277 (410)
T ss_dssp CEECCTTS------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred eEeeccCC------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC
Confidence 98754321 11233567999999999998765 7899999999999999999999997543
No 38
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=370.16 Aligned_cols=264 Identities=28% Similarity=0.439 Sum_probs=216.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||+||+|.+. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467888999999999999999974 3557999999864 33345689999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.++++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 128 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999654 345899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||........ .. .+..
T Consensus 204 ~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~---------~~~~ 269 (325)
T 3kul_A 204 DPDA----AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV-IS---------SVEE 269 (325)
T ss_dssp ---C----CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH-HH---------HHHT
T ss_pred Cccc----eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH-HH---------HHHc
Confidence 2211 112233446778999999999999999999999999999999 9999975443221 11 1122
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
+.....+..++..+.+++..||..+|.+||++.++++.|+.+....+.
T Consensus 270 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~ 317 (325)
T 3kul_A 270 GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPES 317 (325)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC-
T ss_pred CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccc
Confidence 223345667788999999999999999999999999999998765443
No 39
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.3e-41 Score=384.03 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=175.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.++||+|+||+||+|+.+ +++.||+|+++..... ..+.+.+|..+++++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 467899999999999999999975 5889999998754322 224578899999887 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+....
T Consensus 131 V~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999997653 4899999999999999999999999 99999999999999999999999999985322
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 206 ~-------~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~ 255 (396)
T 4dc2_A 206 P-------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 255 (396)
T ss_dssp T-------TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred C-------CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 1 1223456799999999999999999999999999999999999999963
No 40
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2e-39 Score=357.50 Aligned_cols=280 Identities=35% Similarity=0.612 Sum_probs=231.8
Q ss_pred CcccccHHHHHHHhcCCCCC------CeeeeeCCeeEEEEEeCCCcEEEEEEecCCC----hhhHHHHHHHHHHHHhcCC
Q 002174 610 GVRSFTYGEMALATNNFNSS------TQIGQGGYGKVYKGILPDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHH 679 (956)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~------~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h 679 (956)
....|++.++..++++|... +.||+|+||+||+|.. +++.||||++.... ....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8999999999999987 67899999986432 2335688999999999999
Q ss_pred CceeeeecccccCCcEEEEEecCCCCCHHHHHhhc-CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002174 680 RNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAK-SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 680 ~nIv~l~~~~~~~~~~~LV~E~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
|||+++++++.+.+..++||||+++|+|.+++... ...++++..++.++.|+++||+|||+.+ |+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEE
Confidence 99999999999999999999999999999999753 2356899999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchh
Q 002174 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 838 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~ 838 (956)
+.++.+||+|||+++...... .........||+.|+|||.+.+ .++.++||||||+++|||++|+.||......
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 240 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFA-----QTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP 240 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCS-----SCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS
T ss_pred cCCCcEEEeeccccccccccc-----ccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch
Confidence 999999999999998654322 1122234568999999998865 5789999999999999999999999754321
Q ss_pred ---HHHHHHH-hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 839 ---VREVNIA-YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 839 ---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
....... .....+...++......+..++..+.+++..||+.+|.+||++.++++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 1111111 112223445555666678889999999999999999999999999999999864
No 41
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.2e-40 Score=367.35 Aligned_cols=267 Identities=32% Similarity=0.498 Sum_probs=211.7
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002174 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 617 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
.++....++|++.+.||+|+||+||+|.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+.
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 34445567899999999999999999987 68899999987643 2334678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
.++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 9999999999999999976432 24889999999999999999999875 459999999999999999999999999997
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 188 ~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~-------- 252 (309)
T 3p86_A 188 LKASTF-------LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG-------- 252 (309)
T ss_dssp ---------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH--------
T ss_pred cccccc-------cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------
Confidence 543221 12234569999999999999999999999999999999999999997654322111111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
........+..++..+.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 253 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 253 -FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp -HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred -hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11223345667778899999999999999999999999999988653
No 42
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-41 Score=372.05 Aligned_cols=199 Identities=24% Similarity=0.417 Sum_probs=176.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|+.. +|+.||+|+++.... ...+.+.+|..+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 357889999999999999999975 699999999875322 2345778899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 99999999999997643 4889999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 159 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 207 (318)
T 1fot_A 159 ---------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207 (318)
T ss_dssp ---------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 1234569999999999999999999999999999999999999997543
No 43
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-41 Score=373.31 Aligned_cols=260 Identities=19% Similarity=0.342 Sum_probs=208.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||+||+|... +++.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 468899999999999999999975 68999999987543 3445788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC--CCcEEEEeeccccccCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--~~~~kl~DfGla~~~~~~~ 779 (956)
+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 83 ISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp CCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred CCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999999653 345899999999999999999999999 999999999999987 789999999999876432
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .... +..+.
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~---------i~~~~- 219 (321)
T 1tki_A 158 -------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ-IIEN---------IMNAE- 219 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHH---------HHHTC-
T ss_pred -------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH-HHHH---------HHcCC-
Confidence 12344568999999999999889999999999999999999999997543211 1110 00000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
..++... ++.....+.+++.+||..||++|||++|+|+||||...
T Consensus 220 ~~~~~~~-----------------------------------~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~ 264 (321)
T 1tki_A 220 YTFDEEA-----------------------------------FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp CCCCHHH-----------------------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred CCCChhh-----------------------------------hccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence 0111100 01122233478888899999999999999999998765
Q ss_pred CC
Q 002174 940 VS 941 (956)
Q Consensus 940 ~~ 941 (956)
..
T Consensus 265 ~~ 266 (321)
T 1tki_A 265 IE 266 (321)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 44
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-41 Score=373.53 Aligned_cols=290 Identities=22% Similarity=0.400 Sum_probs=198.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||+||+|... +|+.||+|+++..... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 468999999999999999999965 6899999998754332 33678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcC----CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 701 FMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
|++ |+|.+++.... ...+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 997 69999986532 245889999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ...... ..
T Consensus 160 ~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~------~~ 225 (317)
T 2pmi_A 160 IPV-------NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQ-LKLIFD------IM 225 (317)
T ss_dssp SCC-------CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHH------HH
T ss_pred CCc-------ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH------Hh
Confidence 221 11234468999999999986 4689999999999999999999999976543221 111110 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCC--CHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCC
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARP--SMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP--s~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
.. .+......+.++. -+..+...++ ...+.+ .. ......+....+|+.+||+.||++|||++|+|+|
T Consensus 226 ~~----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 226 GT----PNESLWPSVTKLP--KYNPNIQQRPPRDLRQVL---QP--HTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CS----CCTTTCGGGGGCT--TCCTTCCCCCCCCSHHHH---GG--GCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CC----CChhHhhhhhhhh--hcccccccccchhHHHhh---cc--cccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 00 0000000000000 0000001111 111111 10 0111223445689999999999999999999999
Q ss_pred CcccCCCC
Q 002174 934 PYVSSDVS 941 (956)
Q Consensus 934 P~f~~~~~ 941 (956)
|||.....
T Consensus 295 p~f~~~~~ 302 (317)
T 2pmi_A 295 PWFAEYYH 302 (317)
T ss_dssp GGGGGGCC
T ss_pred hhhhcccc
Confidence 99976433
No 45
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.2e-41 Score=380.93 Aligned_cols=305 Identities=25% Similarity=0.343 Sum_probs=207.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcC-CCceeeeecccccC--CcE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQ 695 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~ 695 (956)
..++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+.+++++. ||||+++++++..+ ...
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999964 6899999998643 3344567889999999997 99999999998644 478
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++|||||+ |+|.+++... .+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+|+..
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 99999996 6999999763 5888999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCC--------------ccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHH
Q 002174 776 PVPDIEG--------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR 840 (956)
Q Consensus 776 ~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~ 840 (956)
....... ...........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 4311000 001122344579999999999987 6789999999999999999999999976544322
Q ss_pred HHHHHhhcccc--hhhccCCCCCCChHHHHHHHHHHHHhccc-CCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccC
Q 002174 841 EVNIAYQSSMM--FSVIDGNMGSYPSECVEKFIKLALKCCQD-ETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 917 (956)
Q Consensus 841 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~l~~~c~~~-~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L 917 (956)
.......... .+.+......+. ..+.+-....... ....+..+......+... .......+.+.+|+.+||
T Consensus 240 -~~~i~~~~~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dll~~~L 313 (388)
T 3oz6_A 240 -LERIIGVIDFPSNEDVESIQSPFA----KTMIESLKEKVEIRQSNKRDIFTKWKNLLLKI-NPKADCNEEALDLLDKLL 313 (388)
T ss_dssp -HHHHHHHHCCCCHHHHHTSCCSSH----HHHHHHHHHHCC-----CCCCHHHHHHHHHHH-CTTCCCCHHHHHHHHHHC
T ss_pred -HHHHHHhcCCCCHHHHHhccCHHH----HHHHHhCcccccccCCCHHHhCcchhhhcccc-cccccCCHHHHHHHHHhh
Confidence 2221110000 000000001111 1111111111111 112222333332222222 112234556789999999
Q ss_pred CCCCCCCCCCcCCCCCCcccCC
Q 002174 918 TSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 918 ~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
++||++|+|++|+|+||||+.-
T Consensus 314 ~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 314 QFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp CSSGGGSCCHHHHTTSTTTTTT
T ss_pred ccCcccCCCHHHHhCCHHHHHh
Confidence 9999999999999999998653
No 46
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=7.7e-41 Score=373.85 Aligned_cols=203 Identities=26% Similarity=0.425 Sum_probs=176.7
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 695 (956)
...++|++.+.||+|+||+||+|+.+ +|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 45678999999999999999999975 68999999987532 12345678899999887 899999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 99999999999999997643 4889999999999999999999999 999999999999999999999999999854
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (345)
T 1xjd_A 169 MLGD-------AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221 (345)
T ss_dssp CCTT-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCC-------CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCC
Confidence 3211 1234567999999999999999999999999999999999999999754
No 47
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.9e-41 Score=373.93 Aligned_cols=199 Identities=25% Similarity=0.386 Sum_probs=175.7
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV 698 (956)
++|++.+.||+|+||+||+|+.+ +++.||+|++.... ....+.+.+|.++++++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888999999999999999975 68999999987542 23345688999999988 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999997643 4889999999999999999999999 999999999999999999999999999854321
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 164 G-------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp T-------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred C-------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 1 223445799999999999999999999999999999999999999964
No 48
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=376.16 Aligned_cols=260 Identities=22% Similarity=0.395 Sum_probs=209.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||+||+|... +++.||+|++..........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 367999999999999999999975 6899999999876655667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC--CCcEEEEeeccccccCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--~~~~kl~DfGla~~~~~~~ 779 (956)
+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~ 205 (387)
T 1kob_A 130 LSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205 (387)
T ss_dssp CCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred CCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCc
Confidence 9999999999654 345899999999999999999999999 999999999999974 5789999999998764321
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 206 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~-~~~--------------- 261 (387)
T 1kob_A 206 --------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLET-LQN--------------- 261 (387)
T ss_dssp --------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH---------------
T ss_pred --------ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHH-HHH---------------
Confidence 12334699999999999999999999999999999999999999975432111 110
Q ss_pred CCCChHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 860 GSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c-~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+..+ +...+.. .+...+...+||.+||..||++|||++|+|+||||..
T Consensus 262 --------------i~~~~~~~~~~~-----------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (387)
T 1kob_A 262 --------------VKRCDWEFDEDA-----------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG 310 (387)
T ss_dssp --------------HHHCCCCCCSST-----------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred --------------HHhCCCCCCccc-----------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence 0111 0001100 0111222347888889999999999999999999976
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
+..
T Consensus 311 ~~~ 313 (387)
T 1kob_A 311 DHS 313 (387)
T ss_dssp CCT
T ss_pred Ccc
Confidence 543
No 49
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.3e-40 Score=410.47 Aligned_cols=335 Identities=26% Similarity=0.396 Sum_probs=287.7
Q ss_pred CCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCCCCCceeecCCCCCCCcceeeEEEeCCCCcccc---CC---------
Q 002174 32 TDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGN---LS--------- 99 (956)
Q Consensus 32 ~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~---~~--------- 99 (956)
+.+.|++||++||+++.|+. .+++|+.+++|| .|+||+|.. .+|+.|+|+++++.|. ++
T Consensus 9 ~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C-~w~gv~C~~-------~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 9 SLYREIHQLISFKDVLPDKN-LLPDWSSNKNPC-TFDGVTCRD-------DKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp CHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGG-GSTTEEEET-------TEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred CCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCc-CCcceEECC-------CcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 35789999999999999877 889998777776 699999961 4899999999998886 43
Q ss_pred --------------cCccCCCCCCEEEccCCCCcccCCc--cccCCcccchhhccCCCCCCCCCccc-CCCccccceeec
Q 002174 100 --------------PEIGRLSYLTILDFMWNKISGSIPK--EIGNIKSLELLLLNGNELTGSLPEEL-GYLPKLDRIQID 162 (956)
Q Consensus 100 --------------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls 162 (956)
..|+++++|++|+|++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5778888888999998888888887 88888899999999998888888776 788889999999
Q ss_pred cccccCCCCcc---ccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCC
Q 002174 163 QNYISGSLPKS---FANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 163 ~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (956)
+|++++..|.. +.++++|++|+|++|.+++..+. ..+++|++|+|++|++++.+|. ++.+++|++|+|++|.++
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~ 236 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCC
Confidence 99888887777 78888999999999998876654 7889999999999999988877 999999999999999998
Q ss_pred CCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCc--cccCEEEccCCcCCCCcchhc
Q 002174 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNF 317 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~ 317 (956)
+ .+|..+.++++|++|+|++|.+++..+.. .+++|++|++++|++++.+|..... .+|++|+|++|.+++.+|..|
T Consensus 237 ~-~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~ 314 (768)
T 3rgz_A 237 G-DFSRAISTCTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFF 314 (768)
T ss_dssp S-CHHHHTTTCSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGG
T ss_pred C-cccHHHhcCCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHH
Confidence 7 68889999999999999999999877766 8899999999999999999987654 589999999999999999999
Q ss_pred CCCCcCCeEecccccCCCcCChh-hhhhccCCCCcceEEEccCCCCC-CCCCCC-CCC-CCcEEEecCCccc
Q 002174 318 SGLPRLQRLFIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLT-NISGSF-NIP-PNVTVRLRGNPFC 385 (956)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~-~~~l~~l~~~~L~~L~Ls~N~L~-~l~~~~-~~~-~l~~l~l~~Np~~ 385 (956)
+++++|+.|+|++|+++|.+|.. +..+. +|+.|+|++|+++ .+|..+ .++ .++.|++++|.+.
T Consensus 315 ~~l~~L~~L~L~~n~l~~~ip~~~l~~l~-----~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~ 381 (768)
T 3rgz_A 315 GSCSLLESLALSSNNFSGELPMDTLLKMR-----GLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFS 381 (768)
T ss_dssp GGCTTCCEEECCSSEEEEECCHHHHTTCT-----TCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEE
T ss_pred hcCCCccEEECCCCcccCcCCHHHHhcCC-----CCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcC
Confidence 99999999999999999999876 65544 4568999999998 666665 354 8888999888764
No 50
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=366.68 Aligned_cols=283 Identities=25% Similarity=0.356 Sum_probs=206.5
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCCh-----hhHHHHHHHHHHHHhc---CCCceeeeeccccc
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRL---HHRNLVSLVGYCDE 691 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~ 691 (956)
...++|++.+.||+|+||+||+|.. .+++.||||++..... .....+.+|+++++++ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 3467999999999999999999996 4789999999863221 1124666777777766 49999999999876
Q ss_pred CC-----cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEE
Q 002174 692 EG-----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 692 ~~-----~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
.. ..++||||++ |+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl 161 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKL 161 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEE
Confidence 54 5799999996 69999998776666999999999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 846 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~ 846 (956)
+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||............ .
T Consensus 162 ~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i-~ 232 (308)
T 3g33_A 162 ADFGLARIYSYQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI-F 232 (308)
T ss_dssp CSCSCTTTSTTCC--------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHH-H
T ss_pred eeCccccccCCCc--------ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H
Confidence 9999998654221 224457899999999999999999999999999999999999999765432221111 1
Q ss_pred hcccchhhccCCCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCC
Q 002174 847 QSSMMFSVIDGNMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 923 (956)
Q Consensus 847 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~ 923 (956)
..... .....+. ..+. . ...+....... ...++......+++.+||..||++
T Consensus 233 ~~~~~--~~~~~~~~~~~~~~-----------~--~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 233 DLIGL--PPEDDWPRDVSLPR-----------G--AFPPRGPRPVQ----------SVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHCC--CCTTTSCSSCSSCG-----------G--GSCCCCCCCHH----------HHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHhCC--CChhhccchhhccc-----------c--ccCCCCCCcHH----------HhCccccHHHHHHHHHHhcCCCcc
Confidence 00000 0000000 0000 0 00011111111 122344455568999999999999
Q ss_pred CCCCcCCCCCCcccCCCC
Q 002174 924 PPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 924 R~sa~e~L~HP~f~~~~~ 941 (956)
|||++|+|+||||..+..
T Consensus 288 R~t~~e~l~h~~~~~~~~ 305 (308)
T 3g33_A 288 RISAFRALQHSYLHKDEG 305 (308)
T ss_dssp SCCHHHHHTSTTC-----
T ss_pred CCCHHHHhcCccccCCCC
Confidence 999999999999987654
No 51
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.8e-41 Score=391.79 Aligned_cols=284 Identities=21% Similarity=0.314 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC------C
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 693 (956)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 468999999999999999999965 6899999998753 333456888999999999999999999998544 4
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 57999999964 67777743 3888999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ......
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~------ 277 (464)
T 3ttj_A 213 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIE------ 277 (464)
T ss_dssp ----C--------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH------
T ss_pred ecCCC--------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH------
Confidence 65421 123446799999999999999999999999999999999999999976544332 222111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhHhhCCCC-------CCCCcccccccCCCCCCCCC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPES-------DTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L~~~~~~~~~~-------~~~~~~ll~~~L~~dP~~R~ 925 (956)
..+..+.+....+...........|... ..+..... ...++.. .+.+.+||.+||++||++|+
T Consensus 278 ----~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ 348 (464)
T 3ttj_A 278 ----QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP-----DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348 (464)
T ss_dssp ----HHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSC-----GGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSC
T ss_pred ----hcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCc-----ccccccccccccccCHHHHHHHHHHcCCChhhCC
Confidence 0122222222222222222222222211 11111100 0000000 12346899999999999999
Q ss_pred CCcCCCCCCcccC
Q 002174 926 SSSSMLKHPYVSS 938 (956)
Q Consensus 926 sa~e~L~HP~f~~ 938 (956)
|++|+|+||||..
T Consensus 349 ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 349 SVDDALQHPYINV 361 (464)
T ss_dssp CHHHHHTSTTTGG
T ss_pred CHHHHhcChhhhh
Confidence 9999999999974
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=365.37 Aligned_cols=268 Identities=23% Similarity=0.426 Sum_probs=215.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|.+.+.||+|+||+||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 457888999999999999999975 6899999998776666778899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999764 345899999999999999999999999 999999999999999999999999999876433211
Q ss_pred Ccc-------ccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 782 GIV-------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 782 ~~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
... .........||+.|+|||++.+..++.++|||||||++|||++|..|+.......... .......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-----~~~~~~~ 239 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-----GLNVRGF 239 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-----SBCHHHH
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-----hhhhhcc
Confidence 000 0111124579999999999999999999999999999999999999986422100000 0000000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
.. ...+..++..+.+++.+||+.+|++||++.++++.|+.+....
T Consensus 240 ~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~ 284 (310)
T 3s95_A 240 LD---RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHL 284 (310)
T ss_dssp HH---HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cc---ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 00 1123445567899999999999999999999999999887654
No 53
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=369.58 Aligned_cols=258 Identities=22% Similarity=0.366 Sum_probs=207.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh------hHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 457889999999999999999975 6899999998754321 356899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC----cEEEEeecc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DfGl 771 (956)
++||||+++|+|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 164 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGL 164 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence 9999999999999999653 45899999999999999999999999 99999999999999887 899999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 165 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~------ 230 (326)
T 2y0a_A 165 AHKIDFGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS------ 230 (326)
T ss_dssp CEECCTTS--------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH------
T ss_pred CeECCCCC--------ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH------
Confidence 98764221 1234569999999999999999999999999999999999999996543211110000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
.. ...++... .+.......+|+.+||..||++|||++|+|
T Consensus 231 ----~~-~~~~~~~~-----------------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 231 ----AV-NYEFEDEY-----------------------------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270 (326)
T ss_dssp ----HT-CCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred ----hc-CCCcCccc-----------------------------------cccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 00 00111100 011122234788889999999999999999
Q ss_pred CCCcccCC
Q 002174 932 KHPYVSSD 939 (956)
Q Consensus 932 ~HP~f~~~ 939 (956)
+||||...
T Consensus 271 ~hp~~~~~ 278 (326)
T 2y0a_A 271 QHPWIKPK 278 (326)
T ss_dssp HSTTTSCC
T ss_pred cCCCccCC
Confidence 99999754
No 54
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.4e-41 Score=371.55 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=174.2
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 68999999999999999999976 789999999865432 2345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 159 (323)
T 3tki_A 87 CSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (323)
T ss_dssp CTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred CCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCC--
Confidence 9999999998643 45899999999999999999999999 9999999999999999999999999998653222
Q ss_pred CccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.........||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 160 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 160 ---RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp ---EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred ---cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 1122234579999999999988775 778999999999999999999997543
No 55
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.6e-41 Score=370.89 Aligned_cols=265 Identities=28% Similarity=0.418 Sum_probs=202.1
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeCC-C---cEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD-G---TVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
++....++|++.+.||+|+||+||+|.+.. + ..||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 96 (323)
T 3qup_A 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR 96 (323)
T ss_dssp TTBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred hcccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence 344456789999999999999999999653 3 27999998764 23345789999999999999999999999977
Q ss_pred CCcE------EEEEecCCCCCHHHHHhhcC----CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC
Q 002174 692 EGEQ------MLVYEFMSNGTLRDQLSAKS----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 692 ~~~~------~LV~E~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
.+.. ++||||+++|+|.+++.... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.+
T Consensus 97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~ 173 (323)
T 3qup_A 97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAED 173 (323)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTT
T ss_pred cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCC
Confidence 6654 99999999999999986532 225899999999999999999999999 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHH
Q 002174 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 840 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~ 840 (956)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||........
T Consensus 174 ~~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~ 248 (323)
T 3qup_A 174 MTVCVADFGLSRKIYSGDY-----YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI 248 (323)
T ss_dssp SCEEECCCCC----------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred CCEEEeecccccccccccc-----ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHH
Confidence 9999999999986543221 112233456788999999999999999999999999999999 8999975443211
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 841 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
. ..+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+++..
T Consensus 249 ~----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 249 Y----------NYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp H----------HHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H----------HHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1 1122233344566677889999999999999999999999999998754
No 56
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=380.76 Aligned_cols=213 Identities=28% Similarity=0.314 Sum_probs=182.9
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeeccc
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~ 689 (956)
+.+++.....++|++.+.||+|+||+||+|+.+ +|+.||||+++..... ..+.+.+|.+++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345566667899999999999999999999975 6999999998753221 123578899999999999999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002174 690 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
.+.+..++||||+++|+|.+++...+ ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DF 206 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADF 206 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeec
Confidence 99999999999999999999997643 35889999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccc-------cCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
|+++...... ........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 207 Gla~~~~~~~------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 274 (412)
T 2vd5_A 207 GSCLKLRADG------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS 274 (412)
T ss_dssp TTCEECCTTS------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred hhheeccCCC------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence 9998754321 11223457999999999997 3568999999999999999999999997544
No 57
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.4e-40 Score=356.38 Aligned_cols=258 Identities=29% Similarity=0.488 Sum_probs=216.5
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
..++|++.+.||+|+||+||+|.+.+++.||+|++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF 86 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence 3467888999999999999999998889999999986433 346799999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 160 (269)
T 4hcu_A 87 MEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 160 (269)
T ss_dssp CTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred CCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc--
Confidence 99999999996543 45899999999999999999999999 9999999999999999999999999998653211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||....... ... .+..+...
T Consensus 161 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~-~~~---------~~~~~~~~ 226 (269)
T 4hcu_A 161 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVE---------DISTGFRL 226 (269)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHH---------HHHTTCCC
T ss_pred ----cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHH-HHH---------HHhcCccC
Confidence 112233456778999999999999999999999999999999 999997644321 111 11122223
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+...+..+.+++..|++.+|.+||++.++++.|+++.+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 3455567889999999999999999999999999998764
No 58
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.2e-40 Score=362.92 Aligned_cols=270 Identities=26% Similarity=0.426 Sum_probs=214.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc--CCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 695 (956)
.++|++.+.||+|+||+||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46888999999999999999984 2689999999987766667789999999999999999999998854 4568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~ 164 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 164 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC--
T ss_pred EEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccc
Confidence 99999999999999997643 35889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhc-------
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS------- 848 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~------- 848 (956)
...... ........++..|+|||.+.+..++.++||||||+++|||++|..|+....... .......
T Consensus 165 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~~~~~~~ 238 (295)
T 3ugc_A 165 PQDKEF----FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF--MRMIGNDKQGQMIV 238 (295)
T ss_dssp ---------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHH--HHHHCTTCCTHHHH
T ss_pred cCCcce----eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHH--HhhhcCccccchhH
Confidence 432210 112233457778999999999999999999999999999999999986432111 0000000
Q ss_pred -ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 849 -SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 849 -~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
.....+........+..++..+.+++.+||+.+|.+||++.++++.|+++.+.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 011112223344557778889999999999999999999999999999987654
No 59
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.4e-40 Score=373.34 Aligned_cols=271 Identities=25% Similarity=0.431 Sum_probs=221.7
Q ss_pred cccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEe------CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceee
Q 002174 613 SFTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVS 684 (956)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~ 684 (956)
.+...++....++|++.+.||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||++
T Consensus 11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~ 90 (359)
T 3vhe_A 11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 90 (359)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence 355667778889999999999999999999973 2468999999986433 3346799999999999 7999999
Q ss_pred eecccccCC-cEEEEEecCCCCCHHHHHhhcCC-----------------------------------------------
Q 002174 685 LVGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK----------------------------------------------- 716 (956)
Q Consensus 685 l~~~~~~~~-~~~LV~E~~~~gsL~~~l~~~~~----------------------------------------------- 716 (956)
+++++.+.+ ..++||||+++|+|.++++....
T Consensus 91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (359)
T 3vhe_A 91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE 170 (359)
T ss_dssp EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence 999987755 48999999999999999976432
Q ss_pred -----------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 717 -----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 717 -----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 247 (359)
T 3vhe_A 171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247 (359)
T ss_dssp -------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence 12889999999999999999999999 9999999999999999999999999998654322
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.........||+.|+|||++.+..++.++|||||||++|||++ |+.||............ +..+.
T Consensus 248 -----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~---------~~~~~ 313 (359)
T 3vhe_A 248 -----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR---------LKEGT 313 (359)
T ss_dssp -----TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH---------HHHTC
T ss_pred -----cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHH---------HHcCC
Confidence 1122344568899999999999999999999999999999998 99999754432221111 11122
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
....+..++..+.+++..||+.+|.+||++.++++.|+.+..
T Consensus 314 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 334455667789999999999999999999999999998764
No 60
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=1.9e-40 Score=374.02 Aligned_cols=258 Identities=24% Similarity=0.402 Sum_probs=206.5
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3568999999999999999999975 68999999987543 23346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~DfGla~~~ 775 (956)
|||+++|+|.+++... ..+++..+..++.||++||+|||+++ |+||||||+|||++.++ .+||+|||++...
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~ 181 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 181 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEe
Confidence 9999999999999654 45889999999999999999999999 99999999999998654 5999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... +.
T Consensus 182 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~---------i~ 243 (362)
T 2bdw_A 182 NDSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRL-YAQ---------IK 243 (362)
T ss_dssp TTCC--------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH---------HH
T ss_pred cCCc--------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHH---------HH
Confidence 4221 12345699999999999999999999999999999999999999975432111 100 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCc
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+.. .++ . |.. +...+.+.+++.+||..||++|||++|+|+|||
T Consensus 244 ~~~~-~~~-------------------~--~~~--------------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~ 287 (362)
T 2bdw_A 244 AGAY-DYP-------------------S--PEW--------------DTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287 (362)
T ss_dssp HTCC-CCC-------------------T--TGG--------------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHH
T ss_pred hCCC-CCC-------------------c--ccc--------------cCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence 0000 000 0 000 011122347888899999999999999999999
Q ss_pred ccC
Q 002174 936 VSS 938 (956)
Q Consensus 936 f~~ 938 (956)
|..
T Consensus 288 ~~~ 290 (362)
T 2bdw_A 288 ICN 290 (362)
T ss_dssp HHT
T ss_pred cCC
Confidence 964
No 61
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.5e-40 Score=377.32 Aligned_cols=265 Identities=28% Similarity=0.455 Sum_probs=218.1
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
++....++|.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.+.+|++++++++||||+++++++..++..
T Consensus 108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 187 (377)
T 3cbl_A 108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 187 (377)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence 34445678899999999999999999986 789999999875432 3345788999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.++++... ..+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 188 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 188 YIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 99999999999999997542 35889999999999999999999999 999999999999999999999999999864
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
..... ........++..|+|||++.+..++.++|||||||++|||++ |+.||........ .. .+
T Consensus 264 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~-~~---------~~ 328 (377)
T 3cbl_A 264 ADGVY-----AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-RE---------FV 328 (377)
T ss_dssp TTSEE-----ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHH-HH---------HH
T ss_pred CCCce-----eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HH---------HH
Confidence 32110 011112235678999999999999999999999999999998 9999976443211 11 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
..+.....|..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 329 EKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 12223345666788999999999999999999999999999988653
No 62
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.6e-40 Score=355.88 Aligned_cols=258 Identities=27% Similarity=0.446 Sum_probs=216.5
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
..++|++.+.||+|+||.||+|..+++..||||++..... ..+++.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 4578899999999999999999998888999999986443 346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 158 (268)
T 3sxs_A 85 ISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-- 158 (268)
T ss_dssp CTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--
T ss_pred cCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhh--
Confidence 99999999997642 35889999999999999999999999 9999999999999999999999999998754322
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........... +..+...
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----------~~~~~~~ 224 (268)
T 3sxs_A 159 ----YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLK----------VSQGHRL 224 (268)
T ss_dssp ----EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----------HHTTCCC
T ss_pred ----hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHH----------HHcCCCC
Confidence 112233446778999999999999999999999999999999 9999975543222111 1112223
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+...+..+.+++..|++.+|.+||++.++++.|+.+.+
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 3345556789999999999999999999999999987743
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.2e-41 Score=375.29 Aligned_cols=203 Identities=23% Similarity=0.338 Sum_probs=176.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467999999999999999999965 68999999986322 113567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc---EEEEeecc
Q 002174 697 LVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 771 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DfGl 771 (956)
+||||+++|+|.+++... ....+++..+..++.||++||+|||+++ |+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999999887653 3345899999999999999999999999 999999999999987654 99999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 180 a~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 236 (351)
T 3c0i_A 180 AIQLGESG-------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT 236 (351)
T ss_dssp CEECCTTS-------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred eeEecCCC-------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence 98764321 1123456999999999999999999999999999999999999999753
No 64
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=381.74 Aligned_cols=259 Identities=23% Similarity=0.339 Sum_probs=206.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4578999999999999999999864 789999999876443 2346789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc---CCCcEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~---~~~~~kl~DfGla~~~ 775 (956)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++ .++.+||+|||+++..
T Consensus 89 ~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp ECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999997653 4899999999999999999999999 99999999999998 4678999999999765
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ...
T Consensus 164 ~~~~-------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~-~~~----------- 224 (444)
T 3soa_A 164 EGEQ-------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRL-YQQ----------- 224 (444)
T ss_dssp CTTC-------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHH-----------
T ss_pred cCCC-------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHH-HHH-----------
Confidence 4321 122345799999999999999999999999999999999999999965432111 100
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCc
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
+........+... +...+.+.+++.+||..||++|||++|+|+|||
T Consensus 225 -----------------i~~~~~~~~~~~~-----------------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~ 270 (444)
T 3soa_A 225 -----------------IKAGAYDFPSPEW-----------------DTVTPEAKDLINKMLTINPSKRITAAEALKHPW 270 (444)
T ss_dssp -----------------HHHTCCCCCTTTT-----------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCT
T ss_pred -----------------HHhCCCCCCcccc-----------------ccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence 0000000000000 111222347888899999999999999999999
Q ss_pred ccC
Q 002174 936 VSS 938 (956)
Q Consensus 936 f~~ 938 (956)
|+.
T Consensus 271 ~~~ 273 (444)
T 3soa_A 271 ISH 273 (444)
T ss_dssp THH
T ss_pred ccC
Confidence 964
No 65
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=6.5e-41 Score=389.81 Aligned_cols=265 Identities=24% Similarity=0.436 Sum_probs=220.5
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 616 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.+++....++|++.+.||+|+||+||+|.++++..||||+++... ...+.|.+|++++++++||||+++++++. .+..
T Consensus 180 ~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~ 257 (454)
T 1qcf_A 180 KDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPI 257 (454)
T ss_dssp TTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSC
T ss_pred ccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCcc
Confidence 345566778899999999999999999999888999999998644 34568999999999999999999999986 5678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.++++......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~ 334 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVI 334 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGB
T ss_pred EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEc
Confidence 99999999999999997654345788899999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... ........++..|+|||++....++.++|||||||++|||++ |+.||....... ... .+
T Consensus 335 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~-~~~---------~i 398 (454)
T 1qcf_A 335 EDNE------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIR---------AL 398 (454)
T ss_dssp CCHH------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-HHH---------HH
T ss_pred CCCc------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HH
Confidence 3211 111123346788999999999999999999999999999999 999997544321 111 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
..+.....|..++..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 399 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 399 ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 12223345667788999999999999999999999999999987543
No 66
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.9e-40 Score=371.83 Aligned_cols=198 Identities=23% Similarity=0.355 Sum_probs=176.8
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57889999999999999999975 699999999865322 23467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp ECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999997653 4889999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 195 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 242 (350)
T 1rdq_E 195 ---------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ 242 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ---------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC
Confidence 234569999999999999999999999999999999999999997543
No 67
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-40 Score=370.75 Aligned_cols=254 Identities=22% Similarity=0.331 Sum_probs=202.9
Q ss_pred cCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|.+.+.||+|+||+||+|.. .+++.||||++...... ..+.+.+|+++++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788999999999999999996 47899999998643211 2357889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+ +|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 89 E~~-~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp CCC-CEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred ECC-CCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 999 789999987653 4889999999999999999999999 999999999999999999999999999865422
Q ss_pred CCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||...... .+...+...
T Consensus 162 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----------~~~~~i~~~ 223 (336)
T 3h4j_B 162 -------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----------NLFKKVNSC 223 (336)
T ss_dssp -------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----------TCBCCCCSS
T ss_pred -------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----------HHHHHHHcC
Confidence 12234569999999999988776 67899999999999999999999643210 011111111
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
....|... .+...+++.+||..||++|||++|+++||||..
T Consensus 224 ~~~~p~~~---------------------------------------s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~ 264 (336)
T 3h4j_B 224 VYVMPDFL---------------------------------------SPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264 (336)
T ss_dssp CCCCCTTS---------------------------------------CHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred CCCCcccC---------------------------------------CHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence 11111111 112236788888889999999999999999876
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
...
T Consensus 265 ~~~ 267 (336)
T 3h4j_B 265 NLP 267 (336)
T ss_dssp TCC
T ss_pred CCc
Confidence 543
No 68
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.1e-40 Score=389.01 Aligned_cols=296 Identities=22% Similarity=0.299 Sum_probs=196.3
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeeccccc-----CCc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EGE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~~ 694 (956)
.++|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 368999999999999999999965 6899999998653 33345788999999999999999999999843 357
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+ +|+|.+++... ..+++..++.++.||+.||+|||+.+ ||||||||+|||++.++.+||+|||+|+.
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence 89999998 68999999654 45899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCcc--------------------ccceecccccCCCccccccc-ccCCCCCcccEeehHHHHHHHHhC-----
Q 002174 775 APVPDIEGIV--------------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTG----- 828 (956)
Q Consensus 775 ~~~~~~~~~~--------------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwSlG~ll~elltg----- 828 (956)
.......... .........||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 6532211000 01123455789999999986 456799999999999999999994
Q ss_pred ------CCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHH--------HHH
Q 002174 829 ------MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEV--------MRE 894 (956)
Q Consensus 829 ------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v--------~~~ 894 (956)
+.+|............ ................+..+...+ . .|...++ ...
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~i~~~~-g-----~p~~~~~~~~~~~~~~~~ 350 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQ---------KAGNDFKFHTRGNRDQLNVIFNIL-G-----TPSEEDIEALEKEDAKRY 350 (458)
T ss_dssp SSGGGCCCSCC-----------------------------CHHHHHHHHHHHHHH-C-----CCCHHHHHTSSCHHHHHH
T ss_pred cccccccccCCCCccccccccc---------cccccccccccCCHHHHHHHHHHc-C-----CCCHHHHhhcCCHHHHHH
Confidence 4444321110000000 000000000111122222221111 1 1111111 000
Q ss_pred HH--------HhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 895 LE--------SIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 895 L~--------~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
++ .+...++...+.+.+||.+||++||++|+|++|+|+||||.+-
T Consensus 351 ~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 351 IRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp HTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred HHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 00 1122334455667799999999999999999999999999764
No 69
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=376.99 Aligned_cols=253 Identities=25% Similarity=0.370 Sum_probs=200.3
Q ss_pred CCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002174 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~~~~gsL 707 (956)
.+.||+|+||.||+|... +|+.||+|+++.......+.+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 567999999999999964 6999999999877666677899999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE--cCCCcEEEEeeccccccCCCCCCCccc
Q 002174 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL--DHKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl--~~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
.+++... ...+++..++.++.||++||+|||+.+ |+||||||+|||+ +.++.+||+|||+++......
T Consensus 174 ~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~------ 243 (373)
T 2x4f_A 174 FDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE------ 243 (373)
T ss_dssp HHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC------
T ss_pred HHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc------
Confidence 9988653 245889999999999999999999999 9999999999999 567899999999998764322
Q ss_pred cceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChH
Q 002174 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 865 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (956)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........
T Consensus 244 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------------------------- 296 (373)
T 2x4f_A 244 --KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET------------------------- 296 (373)
T ss_dssp --BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-------------------------
T ss_pred --ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHH-------------------------
Confidence 12334699999999999999999999999999999999999999975433211
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 866 CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
+.++....+...+.. ++...+.+.+||.+||..||++|||++|+|+||||...
T Consensus 297 ----~~~i~~~~~~~~~~~-----------------~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 297 ----LNNILACRWDLEDEE-----------------FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp ----HHHHHHTCCCSCSGG-----------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred ----HHHHHhccCCCChhh-----------------hccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 111111111111100 11122334578889999999999999999999998753
No 70
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.6e-40 Score=372.36 Aligned_cols=261 Identities=27% Similarity=0.453 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||.||+|++. ++..||||+++... ....+++.+|++++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 468999999999999999999864 57789999997643 3345689999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.++++.. ...+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 124 v~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 199 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLED 199 (373)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred EEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence 99999999999999764 345899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... .... +..
T Consensus 200 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-~~~~---------i~~ 265 (373)
T 2qol_A 200 DPEA----AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-VIKA---------VDE 265 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-HHHH---------HHT
T ss_pred CCcc----ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHHH---------HHc
Confidence 2210 111122345778999999999999999999999999999998 999997554321 1111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 266 ~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 266 GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 112234556778899999999999999999999999999988653
No 71
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9e-40 Score=379.57 Aligned_cols=257 Identities=30% Similarity=0.448 Sum_probs=215.9
Q ss_pred HHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC-cEEE
Q 002174 619 MALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQML 697 (956)
Q Consensus 619 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~L 697 (956)
+....++|++.+.||+|+||.||+|.+. ++.||||+++... ..+.|.+|++++++++||||+++++++...+ ..++
T Consensus 188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~i 264 (450)
T 1k9a_A 188 WALNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYI 264 (450)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEE
T ss_pred cccChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEE
Confidence 3345678889999999999999999985 7899999998644 3468999999999999999999999986654 7999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 265 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 341 (450)
T 1k9a_A 265 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 341 (450)
T ss_dssp EEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence 999999999999998776666889999999999999999999999 99999999999999999999999999985432
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
. .....++..|+|||++.+..++.++|||||||++|||++ |+.||....... .. ..+..
T Consensus 342 ~----------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~---------~~i~~ 401 (450)
T 1k9a_A 342 T----------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VV---------PRVEK 401 (450)
T ss_dssp ---------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT-HH---------HHHHT
T ss_pred c----------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HH---------HHHHc
Confidence 1 112356889999999999999999999999999999998 999997543211 11 11122
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
+.....|..++..+.+++.+||+.+|.+||++.++++.|+.+...
T Consensus 402 ~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 402 GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 333455777889999999999999999999999999999988653
No 72
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-40 Score=370.96 Aligned_cols=202 Identities=26% Similarity=0.407 Sum_probs=168.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe----CCCcEEEEEEecCCCh----hhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
.++|++.+.||+|+||.||+|.. .+++.||+|+++.... .....+.+|++++++++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 4789999999876432 233567889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999997643 4788899999999999999999999 99999999999999999999999999975
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 171 ~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 225 (327)
T 3a62_A 171 SIHDG-------TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN 225 (327)
T ss_dssp ---------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccCC-------ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC
Confidence 43211 12234569999999999999999999999999999999999999997543
No 73
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.6e-40 Score=364.78 Aligned_cols=260 Identities=20% Similarity=0.285 Sum_probs=184.4
Q ss_pred CCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEecCCCCC
Q 002174 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~E~~~~gs 706 (956)
.+.||+|+||+||+|... +++.||||++... ....+.+|+++++.+. ||||+++++++.+++..++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999975 6899999998643 3457788999999997 9999999999999999999999999999
Q ss_pred HHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEEEeeccccccCCCCCCCc
Q 002174 707 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 707 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~DfGla~~~~~~~~~~~ 783 (956)
|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++......
T Consensus 93 L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---- 163 (325)
T 3kn6_A 93 LFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---- 163 (325)
T ss_dssp HHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC----
Confidence 99999764 45899999999999999999999999 99999999999998765 89999999998654321
Q ss_pred cccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002174 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 164 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~--------------------~~~ 220 (325)
T 3kn6_A 164 ---QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT--------------------CTS 220 (325)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---------------------------CCC
T ss_pred ---CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc--------------------ccc
Confidence 122345689999999999999999999999999999999999999964321100 000
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCCC
Q 002174 864 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
..+++.......+...+ . . .+...+...+++.+||..||++|||++|+++||||.....-
T Consensus 221 ------~~~~~~~i~~~~~~~~~--~-~----------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~ 280 (325)
T 3kn6_A 221 ------AVEIMKKIKKGDFSFEG--E-A----------WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQL 280 (325)
T ss_dssp ------HHHHHHHHTTTCCCCCS--H-H----------HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCC
T ss_pred ------HHHHHHHHHcCCCCCCc--c-c----------ccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccC
Confidence 00000100111110000 0 0 00112234478999999999999999999999999876543
No 74
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=374.64 Aligned_cols=242 Identities=26% Similarity=0.370 Sum_probs=195.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
-++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367889999999999999999965 58999999986432 12346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999764 35899999999999999999999999 999999999999999999999999999875422
Q ss_pred CCCCccccceecccccCCCccccccccc---CCCCCcccEeehHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcccchh
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFS 853 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~ 853 (956)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......
T Consensus 169 --------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~---------- 230 (384)
T 4fr4_A 169 --------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVH---------- 230 (384)
T ss_dssp --------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHH----------
T ss_pred --------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHH----------
Confidence 12345679999999999974 4589999999999999999999999964322 111111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 887 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs 887 (956)
.+......+|..++..+.+++.+|+..+|.+||+
T Consensus 231 ~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s 264 (384)
T 4fr4_A 231 TFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264 (384)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence 1111222344455566666666666666666665
No 75
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=7.6e-40 Score=403.41 Aligned_cols=336 Identities=21% Similarity=0.288 Sum_probs=268.8
Q ss_pred CCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCC------CCCCCCC------------CceeecCCCCCCCcceeeEEEe
Q 002174 28 DDSITDPIEVSALRSIKKSLVDDYSKLSNWNRG------DPCTSNW------------TGVLCFNTTMDDGYLHLRELQL 89 (956)
Q Consensus 28 ~~~~~~~~~~~al~~~k~~~~~~~~~l~~W~~~------~~c~~~w------------~gv~C~~~~~~~~~~~l~~L~L 89 (956)
..+.+...|+.||++||+++.++ +|+.+ ++|+|.| .||+|... .+|+.|+|
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~------~~V~~L~L 330 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNN------GRVTGLSL 330 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTT------SCEEEEEC
T ss_pred cccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCC------CCEEEEEC
Confidence 34455678999999999999765 67543 4655689 99999652 58999999
Q ss_pred CCCCccccCCcCccCCCCCCEEEc-cCCCCccc-----------------------------------------------
Q 002174 90 LNLNLSGNLSPEIGRLSYLTILDF-MWNKISGS----------------------------------------------- 121 (956)
Q Consensus 90 ~~~~l~~~~~~~l~~l~~L~~L~L-~~N~l~~~----------------------------------------------- 121 (956)
++++|+|.+|++|++|++|++|+| ++|.++|.
T Consensus 331 s~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~ 410 (876)
T 4ecn_A 331 AGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINR 410 (876)
T ss_dssp TTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHT
T ss_pred ccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhh
Confidence 999999999999999999999999 77755444
Q ss_pred -----------------------------CCccccCCcccchhhccCCCCCC-----------------CCCcccC--CC
Q 002174 122 -----------------------------IPKEIGNIKSLELLLLNGNELTG-----------------SLPEELG--YL 153 (956)
Q Consensus 122 -----------------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l 153 (956)
+|..|+++++|++|+|++|+|++ .+|..++ ++
T Consensus 411 ~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L 490 (876)
T 4ecn_A 411 NPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNL 490 (876)
T ss_dssp CTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGC
T ss_pred CccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccC
Confidence 88899999999999999999998 3899988 99
Q ss_pred ccccceeeccccccCCCCccccccccCCeeecccCc-ccC-CCccccCCcc-------ccceeccccccccCCCCc--cc
Q 002174 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISG-QIPPELSRLP-------SLVHMLLDNNNLTGYLPP--EL 222 (956)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~~~~p~--~l 222 (956)
++|++|+|++|++.+.+|..|.++++|+.|+|++|+ +++ .+|..++.++ +|++|+|++|+++ .+|. .|
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l 569 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASL 569 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHH
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhh
Confidence 999999999999999999999999999999999998 988 7887666655 9999999999999 7888 89
Q ss_pred CCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCC-ccEEEccCCcCCCCCCCCCCcc---c
Q 002174 223 SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLSL---N 298 (956)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~---~ 298 (956)
.++++|+.|+|++|+++ .+| .|+++++|+.|+|++|+++..+..+..+++ |+.|+|++|+|+ .+|..+... +
T Consensus 570 ~~L~~L~~L~Ls~N~l~--~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 570 QKMVKLGLLDCVHNKVR--HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYV 645 (876)
T ss_dssp TTCTTCCEEECTTSCCC--BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSC
T ss_pred hcCCCCCEEECCCCCcc--cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCchhhhccccCC
Confidence 99999999999999997 567 888999999999999999866667888888 999999999988 777654433 3
Q ss_pred cCEEEccCCcCCCCcchhc---C--CCCcCCeEecccccCCCcCChhhh-hhccCCCCcceEEEccCCCCCCCCCCC-CC
Q 002174 299 ITTIKLSNNKLTGTIPSNF---S--GLPRLQRLFIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGSF-NI 371 (956)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~ip~~~~-~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~ 371 (956)
|+.|+|++|++++.+|... . .+++|+.|+|++|+++ .+|..+. .+ +.|+.|+|++|+|+.+|... ..
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l-----~~L~~L~Ls~N~L~~ip~~~~~~ 719 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATG-----SPISTIILSNNLMTSIPENSLKP 719 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTT-----CCCSEEECCSCCCSCCCTTSSSC
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccC-----CCCCEEECCCCcCCccChHHhcc
Confidence 8888888888877655322 2 2346777777777777 5565543 22 23446666666666665543 11
Q ss_pred --------CCCcEEEecCCccc
Q 002174 372 --------PPNVTVRLRGNPFC 385 (956)
Q Consensus 372 --------~~l~~l~l~~Np~~ 385 (956)
+.+..|+|++|.+.
T Consensus 720 ~~~~l~nl~~L~~L~Ls~N~L~ 741 (876)
T 4ecn_A 720 KDGNYKNTYLLTTIDLRFNKLT 741 (876)
T ss_dssp TTSCCTTGGGCCEEECCSSCCC
T ss_pred ccccccccCCccEEECCCCCCc
Confidence 15666666666554
No 76
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=3.2e-40 Score=369.79 Aligned_cols=265 Identities=29% Similarity=0.478 Sum_probs=218.9
Q ss_pred HHHHhcCCCCCCeeeeeCCeeEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002174 619 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 619 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
+....++|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445688999999999999999999974 34899999998643 3345689999999999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC----------------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEecc
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHR 749 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~ 749 (956)
.+..++||||+++|+|.+++.... ...+++..++.++.||++||.|||+++ |+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence 999999999999999999997642 156899999999999999999999999 9999
Q ss_pred CCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-C
Q 002174 750 DIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-G 828 (956)
Q Consensus 750 Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g 828 (956)
||||+||+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 273 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADY-----YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG 273 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGC-----BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCcc-----ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcC
Confidence 9999999999999999999999976532211 112234457889999999999999999999999999999999 9
Q ss_pred CCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 829 MQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 829 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
+.||....... ... .+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++...
T Consensus 274 ~~p~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 274 LQPYYGMAHEE-VIY---------YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp CCTTTTSCHHH-HHH---------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred CCcCCCCChHH-HHH---------HHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 99997544321 111 1223333455667778999999999999999999999999999987654
No 77
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=370.12 Aligned_cols=288 Identities=22% Similarity=0.377 Sum_probs=207.2
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhh-HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
++|++.+.||+|+||+||+|... +++.||||++....... ...+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57889999999999999999975 78999999987543222 12456799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ |+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 154 (324)
T ss_dssp CS-EEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCc--
Confidence 96 69999987653 45889999999999999999999999 9999999999999999999999999998653221
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..... ........
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~------~~~~~~~~ 222 (324)
T 3mtl_A 155 -----KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQ-LHFIF------RILGTPTE 222 (324)
T ss_dssp -------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHH------HHHCCCCT
T ss_pred -----cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH------HHhCCCCh
Confidence 12234468999999999976 5689999999999999999999999976443221 11111 00000000
Q ss_pred -CCChHHH-HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 861 -SYPSECV-EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 861 -~~~~~~~-~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
..+.... ..+.. ...|..+... .....+..+....+|+.+||..||++|||++|+|+||||.+
T Consensus 223 ~~~~~~~~~~~~~~------~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 287 (324)
T 3mtl_A 223 ETWPGILSNEEFKT------YNYPKYRAEA---------LLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287 (324)
T ss_dssp TTSTTGGGCHHHHH------TCCCCCCCCC---------HHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGG
T ss_pred Hhchhhhcchhhcc------cccccccchh---------hhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhh
Confidence 0000000 00000 0011111110 11122334455578999999999999999999999999987
Q ss_pred CCCCCcc
Q 002174 939 DVSGSNL 945 (956)
Q Consensus 939 ~~~~~~~ 945 (956)
.......
T Consensus 288 ~~~~~~~ 294 (324)
T 3mtl_A 288 LGERIHK 294 (324)
T ss_dssp GCSTTSS
T ss_pred ccccccc
Confidence 7665433
No 78
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=6.7e-40 Score=363.87 Aligned_cols=268 Identities=24% Similarity=0.294 Sum_probs=208.4
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC----cEE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----EQM 696 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----~~~ 696 (956)
...++|++.+.||+|+||+||+|++. ++.||||++..... ....+.+|+.++++++||||+++++++.... ..+
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 34578999999999999999999875 79999999975432 3345667999999999999999999997644 479
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc----------CCCCEeccCCCcccEEEcCCCcEEE
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------ADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
+||||+++|+|.++++.. .+++..++.++.|+++||+|||+. + |+||||||+|||++.++.+||
T Consensus 99 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEE
T ss_pred EEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEE
Confidence 999999999999999764 389999999999999999999998 7 999999999999999999999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCccccccccc-----CCCCCcccEeehHHHHHHHHhCCCCCCCCchhH--
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-- 839 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~-- 839 (956)
+|||+++....... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+..
T Consensus 173 ~DFg~a~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~ 247 (322)
T 3soc_A 173 ADFGLALKFEAGKS-----AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYML 247 (322)
T ss_dssp CCCTTCEEECTTSC-----CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCC
T ss_pred ccCCcccccccccC-----ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhcc
Confidence 99999987653321 112234569999999999987 355668899999999999999999996432100
Q ss_pred HHHHHHhhc---ccchh-hccCC-CCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 840 REVNIAYQS---SMMFS-VIDGN-MGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 840 ~~~~~~~~~---~~~~~-~~~~~-~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
......... ..+.. ..... .+.. +..++..+.+++.+||+.+|++||++.++++.|+++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 248 PFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred chhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 000000000 00000 11111 1111 235677899999999999999999999999999988654
No 79
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=371.17 Aligned_cols=260 Identities=25% Similarity=0.364 Sum_probs=194.7
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
..++|++.+.||+|+||+||+|... +++.||||+++... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 3568999999999999999999976 58899999987543 34578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeeccccccCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPV 777 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGla~~~~~ 777 (956)
|+++|+|.+++... ..+++..++.++.|+++||.|||+.+ |+||||||+||+++. ++.+||+|||+++....
T Consensus 129 ~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~ 203 (349)
T 2w4o_A 129 LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH 203 (349)
T ss_dssp CCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred eCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence 99999999999654 35889999999999999999999999 999999999999975 88999999999986532
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 204 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~------------- 262 (349)
T 2w4o_A 204 Q--------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRR------------- 262 (349)
T ss_dssp -----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHH-------------
T ss_pred c--------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHH-------------
Confidence 2 1223456899999999999999999999999999999999999999754332111111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCccc
Q 002174 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
+..+....+. |. .+.......+++.+||..||++|||++|+|+||||.
T Consensus 263 ----------------i~~~~~~~~~--~~--------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~ 310 (349)
T 2w4o_A 263 ----------------ILNCEYYFIS--PW--------------WDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVT 310 (349)
T ss_dssp ----------------HHTTCCCCCT--TT--------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTT
T ss_pred ----------------HHhCCCccCC--ch--------------hhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence 0001000000 00 011122234789999999999999999999999998
Q ss_pred CCCC
Q 002174 938 SDVS 941 (956)
Q Consensus 938 ~~~~ 941 (956)
....
T Consensus 311 ~~~~ 314 (349)
T 2w4o_A 311 GKAA 314 (349)
T ss_dssp STTC
T ss_pred CCcc
Confidence 7655
No 80
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.3e-40 Score=384.77 Aligned_cols=264 Identities=30% Similarity=0.467 Sum_probs=215.6
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 617 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
..+....++|++.+.||+|+||.||+|.++++..||||+++.... ..+.|.+|++++++++||||+++++++.+ +..+
T Consensus 177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~ 254 (452)
T 1fmk_A 177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 254 (452)
T ss_dssp TCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred cccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceE
Confidence 445556788999999999999999999998888899999986443 35689999999999999999999999876 6789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 9999999999999997644456889999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+.
T Consensus 332 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~-~~~---------~i~ 395 (452)
T 1fmk_A 332 DNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLD---------QVE 395 (452)
T ss_dssp -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHH---------HHH
T ss_pred CCc------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HHH
Confidence 321 111223446789999999999999999999999999999999 999997544321 111 112
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.+.....|..++..+.+++.+||+.+|++||++.++++.|+++...
T Consensus 396 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 396 RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 2233445667888999999999999999999999999999987543
No 81
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=369.96 Aligned_cols=266 Identities=26% Similarity=0.467 Sum_probs=220.2
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeC--------CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeecccc
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 690 (956)
...++|.+.+.||+|+||+||+|... .+..||||+++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 145 (382)
T 3tt0_A 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145 (382)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec
Confidence 34578899999999999999999852 246899999976433 3347889999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccE
Q 002174 691 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 691 ~~~~~~LV~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 756 (956)
..+..++||||+++|+|.+++.... ...+++..++.++.||++||+|||+.+ |+||||||+||
T Consensus 146 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 222 (382)
T 3tt0_A 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNV 222 (382)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGE
T ss_pred cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceE
Confidence 9999999999999999999998654 245899999999999999999999999 99999999999
Q ss_pred EEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCC
Q 002174 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~ 835 (956)
|++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 223 ll~~~~~~kL~DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~ 297 (382)
T 3tt0_A 223 LVTEDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGV 297 (382)
T ss_dssp EECTTCCEEECSCSCCCCSSCCCT-----TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEcCCCcEEEcccCcccccccccc-----cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999987653321 112234457889999999999999999999999999999999 99999754
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 836 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
.. .+.... +..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++......
T Consensus 298 ~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~ 356 (382)
T 3tt0_A 298 PV-EELFKL---------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356 (382)
T ss_dssp CH-HHHHHH---------HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred CH-HHHHHH---------HHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 32 111111 112223344566778899999999999999999999999999998776543
No 82
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.5e-40 Score=389.26 Aligned_cols=203 Identities=28% Similarity=0.429 Sum_probs=180.5
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
..++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|++++++++||||+++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3567999999999999999999975 699999999865322 234578899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.......+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999998766666999999999999999999999999 99999999999999999999999999987542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 339 ~~--------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~ 388 (576)
T 2acx_A 339 GQ--------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388 (576)
T ss_dssp TC--------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCS
T ss_pred Cc--------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 21 123457999999999999999999999999999999999999999753
No 83
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.5e-40 Score=369.72 Aligned_cols=203 Identities=22% Similarity=0.355 Sum_probs=177.0
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 696 (956)
..++|++.+.||+|+||+||+|+.. +++.||+|+++.... ...+.+..|.++++.+ +||||+++++++.+.+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 3468999999999999999999976 488999999875321 2345678899999988 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 98 lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 172 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 172 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccc
Confidence 9999999999999997643 4889999999999999999999999 9999999999999999999999999998543
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 173 ~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~ 225 (353)
T 2i0e_A 173 WDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225 (353)
T ss_dssp CTT-------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCC-------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC
Confidence 211 12344579999999999999999999999999999999999999997543
No 84
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.7e-40 Score=362.37 Aligned_cols=263 Identities=29% Similarity=0.474 Sum_probs=217.8
Q ss_pred HHHhcCCCCCCeeeeeCCeeEEEEEe------CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002174 620 ALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 620 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
....++|.+.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 34567899999999999999999985 245899999997643 33456889999999999999999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCC----------------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccC
Q 002174 693 GEQMLVYEFMSNGTLRDQLSAKSK----------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 750 (956)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 750 (956)
+..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ |+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccc
Confidence 999999999999999999976432 34889999999999999999999999 99999
Q ss_pred CCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CC
Q 002174 751 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 829 (956)
Q Consensus 751 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~ 829 (956)
|||+||+++.++.+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |+
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~ 250 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDS-----YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSC-----EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred cchheEEEcCCCCEEEcccccccccccccc-----ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 999999999999999999999986643221 111233457788999999999999999999999999999999 99
Q ss_pred CCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 830 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 830 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.||........ .. .+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+++..
T Consensus 251 ~p~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 251 NPYPGIPPERL-FN---------LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp CSSTTCCGGGH-HH---------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHH-HH---------HhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99975432111 11 111122334556677889999999999999999999999999998764
No 85
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=5.5e-40 Score=398.00 Aligned_cols=339 Identities=21% Similarity=0.295 Sum_probs=288.5
Q ss_pred CCCCHHHHHHHHHHHHhccCCC--------CCCCCCCCCCCCCCCC---CceeecCCCCCCCcceeeEEEeCCCCccccC
Q 002174 30 SITDPIEVSALRSIKKSLVDDY--------SKLSNWNRGDPCTSNW---TGVLCFNTTMDDGYLHLRELQLLNLNLSGNL 98 (956)
Q Consensus 30 ~~~~~~~~~al~~~k~~~~~~~--------~~l~~W~~~~~c~~~w---~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~ 98 (956)
+.++..|+.||.++++++.++. +...+|+...+|| .| .||+|+.. .+|+.|+|++++++|.+
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c-~w~~~~GV~C~~~------~~V~~L~L~~~~l~g~l 97 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELD-MWGAQPGVSLNSN------GRVTGLSLEGFGASGRV 97 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGG-GTTCCTTEEECTT------CCEEEEECTTSCCEEEE
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcc-cccCCCCeEEcCC------CCEEEEEecCcccCCcC
Confidence 3455689999999999986542 1234798776665 69 99999643 58999999999999999
Q ss_pred CcCccCCCCCCEEEccCCC-------------------------------------------------------------
Q 002174 99 SPEIGRLSYLTILDFMWNK------------------------------------------------------------- 117 (956)
Q Consensus 99 ~~~l~~l~~L~~L~L~~N~------------------------------------------------------------- 117 (956)
|++|++|++|++|+|++|.
T Consensus 98 p~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~ 177 (636)
T 4eco_A 98 PDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK 177 (636)
T ss_dssp CGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC
T ss_pred ChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccc
Confidence 9999999999999999883
Q ss_pred -----------------CcccCCccccCCcccchhhccCCCCCCC-----------------CCcccC--CCccccceee
Q 002174 118 -----------------ISGSIPKEIGNIKSLELLLLNGNELTGS-----------------LPEELG--YLPKLDRIQI 161 (956)
Q Consensus 118 -----------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L 161 (956)
++| +|..|+++++|++|+|++|.+++. +|..++ ++++|++|+|
T Consensus 178 ~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L 256 (636)
T 4eco_A 178 SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEV 256 (636)
T ss_dssp CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEE
T ss_pred ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEe
Confidence 445 888999999999999999999986 999999 9999999999
Q ss_pred ccccccCCCCccccccccCCeeecccCc-ccC-CCccccCCc------cccceeccccccccCCCCc--ccCCcchhhhh
Q 002174 162 DQNYISGSLPKSFANLNKTRHFHMNNNS-ISG-QIPPELSRL------PSLVHMLLDNNNLTGYLPP--ELSELPKLLIL 231 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l~~l------~~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L 231 (956)
++|++.+.+|..|+++++|++|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .++.+++|++|
T Consensus 257 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L 335 (636)
T 4eco_A 257 YNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGML 335 (636)
T ss_dssp ECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEE
T ss_pred cCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEE
Confidence 9999999999999999999999999998 998 889888876 99999999999999 7888 89999999999
Q ss_pred cccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCC-ccEEEccCCcCCCCCCCCCCcc---ccCEEEccCC
Q 002174 232 QLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPN-LGYLDLSSNQLNGSIPPGRLSL---NITTIKLSNN 307 (956)
Q Consensus 232 ~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~~---~L~~L~Ls~N 307 (956)
+|++|+++| .+| .+.++++|+.|+|++|+++..+..+..+++ |++|++++|.++ .+|..+... +|+.|+|++|
T Consensus 336 ~L~~N~l~g-~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 336 ECLYNQLEG-KLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYN 412 (636)
T ss_dssp ECCSCCCEE-ECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSS
T ss_pred eCcCCcCcc-chh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCC
Confidence 999999987 677 889999999999999999977777888888 999999999998 788765543 6999999999
Q ss_pred cCCCCcchhcC-------CCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-C-CC------
Q 002174 308 KLTGTIPSNFS-------GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-N-IP------ 372 (956)
Q Consensus 308 ~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~-~~------ 372 (956)
.+++.+|..|. .+++|+.|+|++|+++ .+|..+.. ..+.|+.|+|++|+++.+|... . ..
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~----~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l 487 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFS----TGSPLSSINLMGNMLTEIPKNSLKDENENFKNT 487 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHH----TTCCCSEEECCSSCCSBCCSSSSEETTEECTTG
T ss_pred cCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHc----cCCCCCEEECCCCCCCCcCHHHhcccccccccc
Confidence 99999998888 8889999999999998 56655433 1234558888888888877654 2 22
Q ss_pred -CCcEEEecCCccc
Q 002174 373 -PNVTVRLRGNPFC 385 (956)
Q Consensus 373 -~l~~l~l~~Np~~ 385 (956)
.++.|+|++|.+.
T Consensus 488 ~~L~~L~Ls~N~l~ 501 (636)
T 4eco_A 488 YLLTSIDLRFNKLT 501 (636)
T ss_dssp GGCCEEECCSSCCC
T ss_pred CCccEEECcCCcCC
Confidence 7788888888765
No 86
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.1e-39 Score=355.87 Aligned_cols=267 Identities=25% Similarity=0.453 Sum_probs=212.0
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
...++|.+.+.||+|+||+||+|.+. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 34578999999999999999999864 35889988753 3334568899999999999999999999875 4568999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 110 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred EecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999999754 346899999999999999999999999 999999999999999999999999999865321
Q ss_pred CCCCccccceecccccCCCcccccccc---cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
. .........||+.|+|||++. +..++.++|||||||++|||++|+.||............... ...
T Consensus 186 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~-----~~~ 255 (307)
T 3lb7_A 186 S-----GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGR-----GYA 255 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHH-----TCC
T ss_pred c-----ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhc-----CCC
Confidence 1 112233456999999999986 567888999999999999999999999765443322221111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
.+........++..+.+++..||+.+|++||++.++++.++.+...+|+
T Consensus 256 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 256 SPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp CCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred CcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 1222233456678899999999999999999999999999999877664
No 87
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=360.37 Aligned_cols=254 Identities=26% Similarity=0.392 Sum_probs=196.3
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh--------------------------hHHHHHHHHHHHH
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------------------GEKEFLTEIQFLS 675 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------------------~~~~~~~E~~~l~ 675 (956)
.++|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 367899999999999999999964 6899999998654321 1246889999999
Q ss_pred hcCCCceeeeeccccc--CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCc
Q 002174 676 RLHHRNLVSLVGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 753 (956)
Q Consensus 676 ~l~h~nIv~l~~~~~~--~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 753 (956)
+++||||+++++++.+ .+..++||||+++++|.+++. ...+++..++.++.|+++||+|||+++ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence 9999999999999876 568899999999999988653 346899999999999999999999999 99999999
Q ss_pred ccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCC---CCCcccEeehHHHHHHHHhCCC
Q 002174 754 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQ 830 (956)
Q Consensus 754 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlG~ll~elltg~~ 830 (956)
+||+++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 238 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSD-------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSS-------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred HHEEECCCCCEEEecCCCcccccccc-------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 99999999999999999998754321 1223457999999999998765 3678999999999999999999
Q ss_pred CCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCc
Q 002174 831 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTP 910 (956)
Q Consensus 831 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~ 910 (956)
||........ .. .+.......|. . +.......
T Consensus 239 pf~~~~~~~~-~~-----------------------------~~~~~~~~~~~-~-----------------~~~~~~l~ 270 (298)
T 2zv2_A 239 PFMDERIMCL-HS-----------------------------KIKSQALEFPD-Q-----------------PDIAEDLK 270 (298)
T ss_dssp SSCCSSHHHH-HH-----------------------------HHHHCCCCCCS-S-----------------SCCCHHHH
T ss_pred CCCCccHHHH-HH-----------------------------HHhcccCCCCC-c-----------------cccCHHHH
Confidence 9965432110 00 00000000000 0 01112234
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCccc
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
+++.+||..||++|||++|+++||||+
T Consensus 271 ~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 271 DLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 678888999999999999999999985
No 88
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-39 Score=356.48 Aligned_cols=260 Identities=25% Similarity=0.382 Sum_probs=208.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999965 6899999988543 233346889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... ++++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999997653 5899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. ........||+.|+|||.+.+..++.++|||||||++|||++|+.||............. .. .....
T Consensus 165 ~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~-~~-~~~~~---- 232 (294)
T 4eqm_A 165 S------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI-QD-SVPNV---- 232 (294)
T ss_dssp ----------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH-SS-CCCCH----
T ss_pred c------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh-hc-cCCCc----
Confidence 1 112234569999999999999999999999999999999999999997655432222111 10 00000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhH
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIW 899 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~ 899 (956)
....+..++..+.+++.+|++.+|.+|| ++.++.+.|+.+.
T Consensus 233 ~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 233 TTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred chhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 0112344567899999999999999998 8888988888664
No 89
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.9e-40 Score=372.50 Aligned_cols=198 Identities=26% Similarity=0.396 Sum_probs=166.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||+||+|+.. +++.||||++...... .+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 468999999999999999999976 7899999999764332 35788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc--EEEEeeccccccCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~DfGla~~~~~~~ 779 (956)
+++|+|.+++.... .+++..++.++.|+++||+|||+++ |+||||||+||+++.++. +||+|||+++.....
T Consensus 98 ~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~- 171 (361)
T 3uc3_A 98 ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH- 171 (361)
T ss_dssp CCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred CCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc-
Confidence 99999999997643 4889999999999999999999999 999999999999987765 999999999743211
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCc-ccEeehHHHHHHHHhCCCCCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDVwSlG~ll~elltg~~pf~~ 834 (956)
.......||+.|+|||++.+..++.+ +|||||||++|||++|+.||..
T Consensus 172 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (361)
T 3uc3_A 172 -------SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC-
T ss_pred -------CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCC
Confidence 12234569999999999988887665 8999999999999999999964
No 90
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.3e-40 Score=358.36 Aligned_cols=262 Identities=26% Similarity=0.434 Sum_probs=215.8
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.+....++|++.+.||+|+||+||+|.+.+++.||||++..... ..+++.+|++++++++||||+++++++.+.+..++
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 96 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFI 96 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEE
Confidence 34455678999999999999999999998888999999986443 34679999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 97 ITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp EECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred EEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999999763 235899999999999999999999999 99999999999999999999999999986542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. ........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||........... +..
T Consensus 173 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~----------~~~ 236 (283)
T 3gen_A 173 DE------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH----------IAQ 236 (283)
T ss_dssp HH------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH----------HHT
T ss_pred cc------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH----------Hhc
Confidence 21 111223446788999999999999999999999999999998 9999976543221111 112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+.....+...+..+.+++.+||+.+|.+||++.++++.|+++.+
T Consensus 237 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 237 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 22233455556789999999999999999999999999998765
No 91
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=5.2e-40 Score=363.71 Aligned_cols=283 Identities=20% Similarity=0.305 Sum_probs=203.4
Q ss_pred hcCCCCC-CeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++. +.||+|+||+||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+++..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567774 78999999999999964 7899999999766555567899999999985 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc---EEEEeeccccccC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAP 776 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DfGla~~~~ 776 (956)
||+++|+|.+++.... .+++..++.++.||++||+|||+++ |+||||||+||+++.++. +||+|||+++...
T Consensus 91 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp ECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 9999999999997653 5889999999999999999999999 999999999999998776 9999999997654
Q ss_pred CCCCCCccccceecccccCCCccccccccc-----CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
.................||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..
T Consensus 166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----------~~ 235 (316)
T 2ac3_A 166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD----------CG 235 (316)
T ss_dssp ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSC----------SC
T ss_pred cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccc----------cc
Confidence 222111111112234569999999999975 568899999999999999999999997532110 00
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
+ ............+.+.+..... .-|. . ..+.......+++.+||..||++|||++|+|
T Consensus 236 ~-----~~~~~~~~~~~~~~~~i~~~~~----~~~~-~-----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l 294 (316)
T 2ac3_A 236 W-----DRGEACPACQNMLFESIQEGKY----EFPD-K-----------DWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294 (316)
T ss_dssp C---------CCHHHHHHHHHHHHHCCC----CCCH-H-----------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHH
T ss_pred c-----cccccchhHHHHHHHHHhccCc----ccCc-h-----------hcccCCHHHHHHHHHHhhCChhhCCCHHHHh
Confidence 0 0000111112222222221110 0110 0 0011223345799999999999999999999
Q ss_pred CCCcccCCCC
Q 002174 932 KHPYVSSDVS 941 (956)
Q Consensus 932 ~HP~f~~~~~ 941 (956)
+||||.+...
T Consensus 295 ~hp~~~~~~~ 304 (316)
T 2ac3_A 295 QHPWVQGCAP 304 (316)
T ss_dssp HSTTCC----
T ss_pred cChhhcCCCC
Confidence 9999986543
No 92
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.8e-40 Score=355.58 Aligned_cols=259 Identities=22% Similarity=0.328 Sum_probs=208.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 467999999999999999999975 5789999998765555567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeeccccccCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~ 778 (956)
+++++|.+++.... .+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||++......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 88 CTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred cCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999999987643 4889999999999999999999999 9999999999999 78899999999999865432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. ......||+.|+|||.+.+. ++.++||||||+++|||++|+.||............ ..+
T Consensus 163 ~--------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----------~~~- 222 (277)
T 3f3z_A 163 K--------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI----------REG- 222 (277)
T ss_dssp S--------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH----------HHC-
T ss_pred c--------chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH----------HhC-
Confidence 1 22344689999999998654 899999999999999999999999754432111110 000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
....+.... ....+...+++.+||..||++|||+.|+|+||||..
T Consensus 223 ~~~~~~~~~-----------------------------------~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~ 267 (277)
T 3f3z_A 223 TFTFPEKDW-----------------------------------LNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEK 267 (277)
T ss_dssp CCCCCHHHH-----------------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHH
T ss_pred CCCCCchhh-----------------------------------hcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhc
Confidence 011111100 011222346888899999999999999999999975
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
...
T Consensus 268 ~~~ 270 (277)
T 3f3z_A 268 QLS 270 (277)
T ss_dssp HHC
T ss_pred ccc
Confidence 443
No 93
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=5e-40 Score=371.55 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=214.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC------CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.+.||+|+||+||+|.+. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467888999999999999999953 4678999999754 334456789999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCC-----CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEEE
Q 002174 696 MLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVA 767 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~ 767 (956)
++||||+++|+|.+++..... ..+++..++.++.||++||+|||+++ |+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999976432 35889999999999999999999999 99999999999999555 59999
Q ss_pred eeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHh
Q 002174 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAY 846 (956)
Q Consensus 768 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~ 846 (956)
|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... +...
T Consensus 227 DFG~a~~~~~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~-~~~~--- 297 (367)
T 3l9p_A 227 DFGMARDIYRAGY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLE--- 297 (367)
T ss_dssp CCHHHHHHHHHSS-----CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH---
T ss_pred CCccccccccccc-----cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHH---
Confidence 9999975422110 112234457899999999999999999999999999999998 99999755432 1111
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 847 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 298 ------~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 298 ------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp ------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ------HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence 112222334566677889999999999999999999999999998755
No 94
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.7e-40 Score=355.82 Aligned_cols=254 Identities=22% Similarity=0.314 Sum_probs=185.2
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999964 689999999875432 23567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+ +++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 78998888654 35899999999999999999999999 9999999999999999999999999997654221
Q ss_pred CCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||...........
T Consensus 167 --------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~--------------- 223 (275)
T 2eue_A 167 --------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN--------------- 223 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH---------------
T ss_pred --------cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH---------------
Confidence 1234468999999999988765 6899999999999999999999965432111000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+.......|. ...+...+++.+||..||++|||++|+|+||||..
T Consensus 224 ---------------~~~~~~~~~~--------------------~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~ 268 (275)
T 2eue_A 224 ---------------ISNGVYTLPK--------------------FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268 (275)
T ss_dssp ---------------HHHTCCCCCT--------------------TSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred ---------------HHhCCCCCCc--------------------cCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence 0000000010 01122336888899999999999999999999987
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
+..
T Consensus 269 ~~~ 271 (275)
T 2eue_A 269 DLP 271 (275)
T ss_dssp TCC
T ss_pred cch
Confidence 654
No 95
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.3e-40 Score=387.58 Aligned_cols=262 Identities=30% Similarity=0.470 Sum_probs=220.3
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeCC-CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
++....++|++.+.||+|+||.||+|.+.. +..||||+++.... ..++|.+|++++++++||||++++++|...+..+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~ 292 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 292 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence 444556788899999999999999999764 88999999986443 3568999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++.......+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceecc
Confidence 9999999999999998766667999999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+.
T Consensus 370 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~-~~~---------~~~ 433 (495)
T 1opk_A 370 GDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-VYE---------LLE 433 (495)
T ss_dssp TCC------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG-HHH---------HHH
T ss_pred CCc------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HHH
Confidence 321 111223446788999999999999999999999999999999 999997543211 111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.+.....|..++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 434 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 434 KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 12233456677889999999999999999999999999998764
No 96
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.8e-40 Score=361.06 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=197.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.++||+|+||+||+|... +++.||||++.... ......+..|+..+.++ +|+||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 468999999999999999999976 79999999986532 23344556666666655 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+ +++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 136 ~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 789999987653 45899999999999999999999999 999999999999999999999999999865422
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. ......||+.|+|||++.+ .++.++|||||||++|||++|..|+........ +..+
T Consensus 211 ~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~-------------~~~~- 267 (311)
T 3p1a_A 211 G--------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQ-------------LRQG- 267 (311)
T ss_dssp ------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHH-------------HTTT-
T ss_pred C--------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHH-------------Hhcc-
Confidence 1 2234568999999999876 789999999999999999999877754221100 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
..+.+.. +.......+++.+||..||++|||++|+|+||||+.
T Consensus 268 --~~~~~~~-----------------------------------~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 310 (311)
T 3p1a_A 268 --YLPPEFT-----------------------------------AGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310 (311)
T ss_dssp --CCCHHHH-----------------------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred --CCCcccc-----------------------------------cCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence 0111100 111222346888899999999999999999999975
No 97
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=360.83 Aligned_cols=285 Identities=23% Similarity=0.331 Sum_probs=209.0
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
++|++.+.||+|+||+||+|... +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57899999999999999999975 589999998865433 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 156 (311)
T 4agu_A 83 YCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS- 156 (311)
T ss_dssp CCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred eCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc-
Confidence 99999999988654 34889999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............. ..
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------~~---- 219 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK-------TL---- 219 (311)
T ss_dssp ---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-------HH----
T ss_pred ------cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-------Hh----
Confidence 12234568999999999976 6789999999999999999999999976544322111110 00
Q ss_pred CCCChHHHHHHHHH--HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCccc
Q 002174 860 GSYPSECVEKFIKL--ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 860 ~~~~~~~~~~l~~l--~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
+...+.....+..- .......+|....... ...+.......+|+.+||..||++|||++|+|+||||.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~ 289 (311)
T 4agu_A 220 GDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLE----------LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289 (311)
T ss_dssp CSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHH----------HHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGT
T ss_pred cccccccccccccccccccCcCCCccccchhh----------hhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHH
Confidence 11111111100000 0000011111111111 11233344456899999999999999999999999998
Q ss_pred CCCC
Q 002174 938 SDVS 941 (956)
Q Consensus 938 ~~~~ 941 (956)
+-..
T Consensus 290 ~~~~ 293 (311)
T 4agu_A 290 NIRE 293 (311)
T ss_dssp TCC-
T ss_pred hccC
Confidence 7544
No 98
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-39 Score=353.52 Aligned_cols=262 Identities=27% Similarity=0.445 Sum_probs=207.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~~ 702 (956)
.++|++.+.||+|+||+||+|.+. ++.||||.+... ...+.+.+|++++++++||||+++++++.+ ..++||||+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~ 81 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYA 81 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcC
Confidence 357888999999999999999984 788999998753 334688999999999999999999999874 478999999
Q ss_pred CCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc-EEEEeeccccccCCCCC
Q 002174 703 SNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-AKVADFGLSRLAPVPDI 780 (956)
Q Consensus 703 ~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-~kl~DfGla~~~~~~~~ 780 (956)
++|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999976543 24678889999999999999999932223999999999999998886 799999999754321
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||............ ....+...
T Consensus 160 --------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--------~~~~~~~~ 223 (307)
T 2eva_A 160 --------MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--------AVHNGTRP 223 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--------HHHTTCCC
T ss_pred --------cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--------HHhcCCCC
Confidence 12345899999999999999999999999999999999999999753322111110 11122233
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCC
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 907 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~ 907 (956)
..+..++..+.+++.+||+.+|.+||++.++++.|+.+...++..+.
T Consensus 224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~~ 270 (307)
T 2eva_A 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADE 270 (307)
T ss_dssp CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTTS
T ss_pred CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCCC
Confidence 44556677899999999999999999999999999999887765543
No 99
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=8.5e-40 Score=355.18 Aligned_cols=265 Identities=28% Similarity=0.448 Sum_probs=218.3
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++.+..++|++.+.||+|+||.||+|...+++.||||.+.... ...+.+.+|++++++++||||+++++++.. +..++
T Consensus 7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 84 (279)
T 1qpc_A 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYI 84 (279)
T ss_dssp TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEE
Confidence 4445567899999999999999999998888899999987643 235689999999999999999999999864 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 161 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIED 161 (279)
T ss_dssp EEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence 999999999999997543335889999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. ........++..|+|||.+.+..++.++||||||+++|||++ |+.||....... .... +..
T Consensus 162 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~-~~~~---------~~~ 225 (279)
T 1qpc_A 162 NE------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE-VIQN---------LER 225 (279)
T ss_dssp SC------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHH---------HHT
T ss_pred cc------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH-HHHH---------Hhc
Confidence 22 111233456789999999998899999999999999999999 899997544321 1111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
+.....+..++..+.+++..|+..+|++||++.++++.|+.+.....
T Consensus 226 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 226 GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 22233455667889999999999999999999999999999876543
No 100
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=9.9e-40 Score=356.35 Aligned_cols=265 Identities=30% Similarity=0.457 Sum_probs=222.9
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 617 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
+++....++|++.+.||+|+||+||+|.+. +++.||+|++.... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 6 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (288)
T 3kfa_A 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPF 84 (288)
T ss_dssp CTTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred hcccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCE
Confidence 345556788999999999999999999976 48899999997643 3456889999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~ 161 (288)
T 3kfa_A 85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLM 161 (288)
T ss_dssp EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTS
T ss_pred EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceec
Confidence 99999999999999998877777999999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... ........+|+.|+|||.+.+..++.++||||||+++|||++ |..||........ .. .+
T Consensus 162 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~-~~---------~~ 225 (288)
T 3kfa_A 162 TGDT------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YE---------LL 225 (288)
T ss_dssp CSSS------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH-HH---------HH
T ss_pred cCCc------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HH---------HH
Confidence 4322 122334557889999999999999999999999999999999 9999865432111 11 01
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
........+..++..+.+++..|+..+|.+||++.++++.|+.+...
T Consensus 226 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122344566778899999999999999999999999999987653
No 101
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1e-39 Score=363.16 Aligned_cols=258 Identities=26% Similarity=0.436 Sum_probs=205.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|++.+.||+|+||+||+|.+. +++ .||+|.+.... ....+.+.+|++++++++||||+++++++... ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeE
Confidence 457888999999999999999964 444 36888876433 33457899999999999999999999999875 478
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+|+||+++|+|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||+|+...
T Consensus 93 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 168 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence 9999999999999997643 45899999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........+|..|+|||++.+..++.++|||||||++|||++ |+.||........ .. .+.
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~---------~~~ 233 (327)
T 3poz_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SS---------ILE 233 (327)
T ss_dssp TTCC------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HH---------HHH
T ss_pred CCcc-----cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH-HH---------HHH
Confidence 3321 112233456889999999999999999999999999999999 9999975432111 00 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 234 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 122334566677889999999999999999999999999988754
No 102
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2e-40 Score=385.12 Aligned_cols=202 Identities=26% Similarity=0.342 Sum_probs=167.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999964 6899999998753 222335678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 227 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999997643 58899999999999999999998 78 99999999999999999999999999975432
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 302 ~-------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 302 D-------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp ------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C-------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 1 122344679999999999999999999999999999999999999997543
No 103
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.3e-40 Score=370.69 Aligned_cols=285 Identities=23% Similarity=0.367 Sum_probs=202.6
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhh--HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||+||+|... +++.||||++....... .+.+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 3468999999999999999999964 78999999997543322 45678999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE-----cCCCcEEEEeecccc
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-----DHKFTAKVADFGLSR 773 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl-----~~~~~~kl~DfGla~ 773 (956)
|||++ |+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++
T Consensus 112 ~e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99996 69999997654 4889999999999999999999999 9999999999999 455669999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||............ .....
T Consensus 186 ~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-~~~~~-- 255 (329)
T 3gbz_A 186 AFGIPI-------RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI-FEVLG-- 255 (329)
T ss_dssp HHC------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH-HHHHC--
T ss_pred ccCCcc-------cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHH-HHHhC--
Confidence 654221 122345689999999999874 4899999999999999999999999765443222111 11000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
... ....+. ...+ .......|..+ ......+. ...+....+|+.+||..||++|||++|+|
T Consensus 256 -~~~--~~~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~R~t~~e~l 317 (329)
T 3gbz_A 256 -LPD--DTTWPG-----VTAL-PDWKQSFPKFRGKTLKRVLG---------ALLDDEGLDLLTAMLEMDPVKRISAKNAL 317 (329)
T ss_dssp -CCC--TTTSTT-----GGGS-TTCCTTCCCCCCCCHHHHHG---------GGSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred -CCc--hhhhhh-----hhhh-hhhhhhhhhhccccHhhhcc---------cccCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 000 000000 0000 00001111111 12221111 01233446899999999999999999999
Q ss_pred CCCcccCCC
Q 002174 932 KHPYVSSDV 940 (956)
Q Consensus 932 ~HP~f~~~~ 940 (956)
+||||++..
T Consensus 318 ~hp~f~~~~ 326 (329)
T 3gbz_A 318 EHPYFSHND 326 (329)
T ss_dssp TSGGGSSSC
T ss_pred CCcccCCCC
Confidence 999998754
No 104
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=4.2e-39 Score=347.76 Aligned_cols=254 Identities=20% Similarity=0.350 Sum_probs=212.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccC--CcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV 698 (956)
.++|++.+.||+|+||+||+|.++ ++.||||++.... ....+.+.+|++++++++||||+++++++.+. +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 357888999999999999999984 8899999987643 33456799999999999999999999999776 788999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++.......+++..++.++.|+++||+|||+.+ ++|+||||||+||+++.++.++|+|||++.....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~- 165 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQS- 165 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC-
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeecc-
Confidence 99999999999998766667999999999999999999999865 4599999999999999999999999998754321
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCC---cccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD---KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||............ ..
T Consensus 166 -----------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---------~~ 225 (271)
T 3kmu_A 166 -----------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV---------AL 225 (271)
T ss_dssp -----------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH---------HH
T ss_pred -----------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH---------Hh
Confidence 2245789999999998765554 799999999999999999999765433221111 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.+.....+..++..+.+++..||+.+|.+||++.++++.|+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 226 EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 22233456667788999999999999999999999999999874
No 105
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.1e-39 Score=376.38 Aligned_cols=285 Identities=20% Similarity=0.259 Sum_probs=211.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc------CCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL------HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~nIv~l~~~~~~~~~~ 695 (956)
..+|++.+.||+|+||+||+|... +++.||||++... ....+.+.+|+++++.+ .|+||+++++++...+..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 457999999999999999999865 5899999999753 33345778888888887 577999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc--EEEEeecccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSR 773 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~DfGla~ 773 (956)
++||||+. ++|.+++.......+++..++.++.||++||+|||+.+ |+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999995 79999998876667999999999999999999999999 999999999999999987 9999999997
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... ...... +
T Consensus 251 ~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~-~l~~i~------~ 313 (429)
T 3kvw_A 251 YEHQR----------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGD-QLACMI------E 313 (429)
T ss_dssp ETTCC----------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH------H
T ss_pred ecCCc----------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHH------H
Confidence 64321 233568999999999999999999999999999999999999997654322 211111 0
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCC---------------------------CCCHHHHHHHHHHhHhhCC-CC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDA---------------------------RPSMSEVMRELESIWNMMP-ES 905 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~---------------------------RPs~~~v~~~L~~~~~~~~-~~ 905 (956)
. .+..+.+....... ....+...... .|...+.. ..++ ..
T Consensus 314 ~----~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~l~~~~ 381 (429)
T 3kvw_A 314 L----LGMPSQKLLDASKR-AKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWG-------NALKGCD 381 (429)
T ss_dssp H----HCCCCHHHHHTBTT-HHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHH-------HHTTTCC
T ss_pred H----cCCCCHHHHHhhhh-hhhccCCCCCcccccccccccccccccccccchhhccCCccchhhH-------hhccccc
Confidence 0 11122222211110 11111100000 00000110 1111 12
Q ss_pred CCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 906 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 906 ~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
++...+||.+||.+||++|||++|+|+||||.....
T Consensus 382 ~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~ 417 (429)
T 3kvw_A 382 DPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLP 417 (429)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC----
T ss_pred hHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCC
Confidence 344568999999999999999999999999987544
No 106
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.3e-39 Score=354.17 Aligned_cols=259 Identities=27% Similarity=0.425 Sum_probs=203.8
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeCC----CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
...++|++.+.||+|+||.||+|.+.. +..||+|++.... ....+.+.+|+.++++++||||+++++++. ++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 345789999999999999999998642 5679999987643 334567899999999999999999999985 4678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 166 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYM 166 (281)
T ss_dssp EEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-------
T ss_pred EEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECcccccccc
Confidence 9999999999999999764 345899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||........ . ..+
T Consensus 167 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-~---------~~i 230 (281)
T 1mp8_A 167 EDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-I---------GRI 230 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-H---------HHH
T ss_pred Cccc------ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-H---------HHH
Confidence 4322 111223456788999999999999999999999999999997 9999975433211 1 111
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+.....+..++..+.+++.+|++.+|++||++.++++.|+.+.+
T Consensus 231 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 231 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 2223334566777889999999999999999999999999998754
No 107
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.8e-39 Score=360.40 Aligned_cols=258 Identities=24% Similarity=0.347 Sum_probs=208.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh------hHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467999999999999999999975 6899999998753321 356799999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC----cEEEEeecc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DfGl 771 (956)
++||||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~ 165 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence 9999999999999999753 45899999999999999999999999 99999999999999888 799999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 166 ~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~------- 229 (321)
T 2a2a_A 166 AHEIEDGV--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQET-LAN------- 229 (321)
T ss_dssp CEECCTTC--------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHH-HHH-------
T ss_pred ceecCccc--------cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHH-HHH-------
Confidence 98754321 12344689999999999999999999999999999999999999965432111 110
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
+.. .....+... .+.......+++.+||..||++|||++|++
T Consensus 230 --i~~-~~~~~~~~~-----------------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~e~l 271 (321)
T 2a2a_A 230 --ITS-VSYDFDEEF-----------------------------------FSHTSELAKDFIRKLLVKETRKRLTIQEAL 271 (321)
T ss_dssp --HHT-TCCCCCHHH-----------------------------------HTTCCHHHHHHHHTTSCSSTTTSCCHHHHH
T ss_pred --HHh-cccccChhh-----------------------------------hcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 000 000111110 011122234789999999999999999999
Q ss_pred CCCcccCC
Q 002174 932 KHPYVSSD 939 (956)
Q Consensus 932 ~HP~f~~~ 939 (956)
+||||...
T Consensus 272 ~hp~~~~~ 279 (321)
T 2a2a_A 272 RHPWITPV 279 (321)
T ss_dssp HSTTTSCS
T ss_pred cCccccCC
Confidence 99999754
No 108
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4e-40 Score=372.22 Aligned_cols=276 Identities=22% Similarity=0.367 Sum_probs=205.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC------C
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 693 (956)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 367889999999999999999974 6999999998643 233356789999999999999999999998665 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 569999999 8899999976 34889999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||....... +......
T Consensus 177 ~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~----- 240 (367)
T 1cm8_A 177 QADSE----------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMK----- 240 (367)
T ss_dssp ECCSS----------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-----
T ss_pred ccccc----------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-----
Confidence 65321 233468999999999987 679999999999999999999999997654332 2221110
Q ss_pred hhccCCCCCCChHHHHHH-----HHHHHHhcccCCCC-CCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCC
Q 002174 853 SVIDGNMGSYPSECVEKF-----IKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 926 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l-----~~l~~~c~~~~p~~-RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s 926 (956)
..+..+.+....+ ...+.. .|.. +.. +...++...+.+.+|+.+||+.||++|+|
T Consensus 241 -----~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~ll~~mL~~dP~~R~t 301 (367)
T 1cm8_A 241 -----VTGTPPAEFVQRLQSDEAKNYMKG----LPELEKKD----------FASILTNASPLAVNLLEKMLVLDAEQRVT 301 (367)
T ss_dssp -----HHCCCCHHHHHTCSCHHHHHHHHH----SCCCCCCC----------GGGTCTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred -----hcCCCCHHHHHHhhhHHHHHHHHh----CCCCCCCC----------HHHHCCCCCHHHHHHHHHHccCChhHCCC
Confidence 0122222222111 111111 1111 111 11223344555678999999999999999
Q ss_pred CcCCCCCCcccCCC
Q 002174 927 SSSMLKHPYVSSDV 940 (956)
Q Consensus 927 a~e~L~HP~f~~~~ 940 (956)
++|+|+||||.+-.
T Consensus 302 ~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 302 AGEALAHPYFESLH 315 (367)
T ss_dssp HHHHHHSGGGTTTC
T ss_pred HHHHhcChHHHhhc
Confidence 99999999997643
No 109
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=362.49 Aligned_cols=268 Identities=25% Similarity=0.390 Sum_probs=216.3
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEe------CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeeccc
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYC 689 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 689 (956)
++....++|++.+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 118 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC 118 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 4555678999999999999999999995 2467899999975432 2346789999999999 899999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcCC---------------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEec
Q 002174 690 DEEGEQMLVYEFMSNGTLRDQLSAKSK---------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFH 748 (956)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 748 (956)
...+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+.+ |+|
T Consensus 119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH 195 (344)
T 1rjb_A 119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVH 195 (344)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence 999999999999999999999976432 24789999999999999999999999 999
Q ss_pred cCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-
Q 002174 749 RDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT- 827 (956)
Q Consensus 749 ~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt- 827 (956)
|||||+||+++.++.+||+|||++....... .........||+.|+|||.+.+..++.++|||||||++|||+|
T Consensus 196 ~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 270 (344)
T 1rjb_A 196 RDLAARNVLVTHGKVVKICDFGLARDIMSDS-----NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSL 270 (344)
T ss_dssp TTCSGGGEEEETTTEEEECCCGGGSCGGGCT-----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTT
T ss_pred CCCChhhEEEcCCCcEEeCCCccCcccccCc-----cceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcC
Confidence 9999999999999999999999998654322 1122344567889999999999999999999999999999998
Q ss_pred CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 828 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 828 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
|+.||............. ..+.....+..++..+.+++.+||..+|.+||++.++++.|+.+....
T Consensus 271 g~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 271 GVNPYPGIPVDANFYKLI---------QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp SCCSSTTCCCSHHHHHHH---------HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCCcccCCcHHHHHHHH---------hcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 999997644322211111 111123345566788999999999999999999999999999876543
No 110
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.6e-40 Score=378.31 Aligned_cols=205 Identities=29% Similarity=0.380 Sum_probs=167.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC-----Cc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 694 (956)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++|+||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999965 6899999999753 333457889999999999999999999998765 57
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||++ |+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+|+.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999995 6999999653 45899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCcc---------------ccceecccccCCCccccccc-ccCCCCCcccEeehHHHHHHHHhCCCCCC
Q 002174 775 APVPDIEGIV---------------PAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (956)
Q Consensus 775 ~~~~~~~~~~---------------~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwSlG~ll~elltg~~pf~ 833 (956)
.......... .........||+.|+|||++ ....++.++||||+||++|||++|..||.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 6533211000 00123556799999999986 45679999999999999999998655553
No 111
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.9e-39 Score=355.21 Aligned_cols=266 Identities=24% Similarity=0.396 Sum_probs=219.0
Q ss_pred HHHhcCCCCCCeeeeeCCeeEEEEEe------CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeeccccc
Q 002174 620 ALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (956)
Q Consensus 620 ~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 691 (956)
....++|++.+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++++++..
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 34557899999999999999999984 2478999999976443 3456889999999999 89999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCC----------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCccc
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAKSK----------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 755 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 755 (956)
++..++||||+++|+|.+++..... ..+++..++.++.|+++||+|||+++ |+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccce
Confidence 9999999999999999999976542 24899999999999999999999999 9999999999
Q ss_pred EEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCC
Q 002174 756 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 834 (956)
Q Consensus 756 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~ 834 (956)
|+++.++.+||+|||+++....... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 250 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTT-----SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred EEEcCCCCEEEcccccccccccccc-----ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999999999987653321 122234457889999999999999999999999999999999 9999975
Q ss_pred CchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 835 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
........... . .......+..++..+.+++.+|++.+|.+||++.++++.|+++....
T Consensus 251 ~~~~~~~~~~~-~--------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 251 MPVDSKFYKMI-K--------EGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp CCSSHHHHHHH-H--------HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ccchhHHHHHh-c--------cCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 44322211111 0 11112234556788999999999999999999999999999887653
No 112
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.9e-39 Score=359.00 Aligned_cols=280 Identities=18% Similarity=0.323 Sum_probs=210.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeeccccc--CCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE--EGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~--~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|.. .+++.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 36799999999999999999986 478999999987533 457889999999997 9999999999977 6678999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccccccCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPV 777 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~ 777 (956)
|||+++++|.+++.. +++..+..++.|++.||+|||+.+ |+||||||+|||++.++ .+||+|||+++....
T Consensus 112 ~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 999999999999843 788899999999999999999999 99999999999999777 899999999986543
Q ss_pred CCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. ......|+..|+|||++.+ ..++.++|||||||++|||++|+.||.......+..........
T Consensus 184 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~------ 249 (330)
T 3nsz_A 184 GQ--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG------ 249 (330)
T ss_dssp TC--------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC------
T ss_pred CC--------ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcC------
Confidence 22 1233468899999999987 67899999999999999999999999766554333322111000
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH--HhHhhCCC-----CCCCCcccccccCCCCCCCCCCCcC
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE--SIWNMMPE-----SDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~--~~~~~~~~-----~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
...+.+.+. .......|...+...... .+....+. ..+...+||.+||..||++|||++|
T Consensus 250 ----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e 316 (330)
T 3nsz_A 250 ----------TEDLYDYID---KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTARE 316 (330)
T ss_dssp ----------HHHHHHHHH---HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHH
T ss_pred ----------CchhhhHHH---HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHH
Confidence 011111111 111111222221110000 00000010 2334468999999999999999999
Q ss_pred CCCCCcccCCC
Q 002174 930 MLKHPYVSSDV 940 (956)
Q Consensus 930 ~L~HP~f~~~~ 940 (956)
+|+||||.+-.
T Consensus 317 ~l~hp~f~~~~ 327 (330)
T 3nsz_A 317 AMEHPYFYTVV 327 (330)
T ss_dssp HHTSGGGTTCC
T ss_pred HhcCccHhhhc
Confidence 99999998654
No 113
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.6e-39 Score=365.55 Aligned_cols=295 Identities=22% Similarity=0.307 Sum_probs=213.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeeccccc--------
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-------- 691 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------- 691 (956)
.++|++.+.||+|+||+||+|.. .+|+.||||++...... ....+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36899999999999999999997 47899999998654322 24578899999999999999999999866
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
.+..++||||++ |+|.+.+.... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 456899999996 58888876543 35899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
++........ .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..............
T Consensus 171 a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~---- 243 (351)
T 3mi9_A 171 ARAFSLAKNS---QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ---- 243 (351)
T ss_dssp CEECCCCSSS---SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH----
T ss_pred cccccccccc---cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH----
Confidence 9876532211 1222344568999999999976 5589999999999999999999999976543222111110
Q ss_pred chhhccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcC
Q 002174 851 MFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 851 ~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
........ .+...... .. .-+......++...+.+.... .++...+|+.+||..||++|||++|
T Consensus 244 ---~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~li~~~L~~dP~~R~t~~e 308 (351)
T 3mi9_A 244 ---LCGSITPEVWPNVDNYE---LY-EKLELVKGQKRKVKDRLKAYV--------RDPYALDLIDKLLVLDPAQRIDSDD 308 (351)
T ss_dssp ---HHCCCCTTTSTTGGGCG---GG-TSSCCCSSCCCCHHHHHHHHH--------CCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred ---HhCCCChhhccccccch---hh-cccccccccccCHHHHhhhcc--------CChHHHHHHHHHhcCChhhCCCHHH
Confidence 00000000 00000000 00 001111122223332222111 1233468999999999999999999
Q ss_pred CCCCCcccCCCCCCc
Q 002174 930 MLKHPYVSSDVSGSN 944 (956)
Q Consensus 930 ~L~HP~f~~~~~~~~ 944 (956)
+|+||||.++...+.
T Consensus 309 ~l~hp~f~~~~~~~~ 323 (351)
T 3mi9_A 309 ALNHDFFWSDPMPSD 323 (351)
T ss_dssp HHTSGGGGSSSCCCC
T ss_pred HhCCCCcCCCCCccc
Confidence 999999988766543
No 114
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.2e-39 Score=348.07 Aligned_cols=253 Identities=32% Similarity=0.514 Sum_probs=201.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCCh----hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+++++.++||||+++++++..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 357888999999999999999974 88999999875332 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC--------CCcEEEEeec
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH--------KFTAKVADFG 770 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~--------~~~~kl~DfG 770 (956)
|||+++++|.+++.. ..+++..++.++.|+++||+|||+++..+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 35889999999999999999999988666899999999999986 7789999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002174 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
+++...... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||.............
T Consensus 162 ~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----- 227 (271)
T 3dtc_A 162 LAREWHRTT---------KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA----- 227 (271)
T ss_dssp C----------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH-----
T ss_pred ccccccccc---------ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhh-----
Confidence 997653221 223468999999999999999999999999999999999999997654332211111
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002174 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
........+..++..+.+++.+||+.+|.+||++.++++.|++
T Consensus 228 ----~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 228 ----MNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp ----TSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred ----cCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 1112234456677889999999999999999999999999875
No 115
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.3e-39 Score=382.46 Aligned_cols=203 Identities=24% Similarity=0.420 Sum_probs=179.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|+.. +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467888999999999999999975 699999999875332 2245788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 699 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999997643 446899999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 341 ~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 341 AGQ-------TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp TTC-------CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred CCC-------cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 321 1123357999999999999999999999999999999999999999753
No 116
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.9e-39 Score=350.83 Aligned_cols=260 Identities=24% Similarity=0.372 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 468999999999999999999975 68999999986533 333467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc---EEEEeeccccccC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGLSRLAP 776 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DfGla~~~~ 776 (956)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++....
T Consensus 85 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 159 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 159 (284)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred ecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence 999999999988765 34889999999999999999999999 999999999999987655 9999999997654
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
... ......||+.|+|||++.+..++.++||||||+++|||++|+.||............
T Consensus 160 ~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~------------ 219 (284)
T 3kk8_A 160 DSE--------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI------------ 219 (284)
T ss_dssp SSC--------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH------------
T ss_pred cCc--------cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHH------------
Confidence 321 123356899999999999999999999999999999999999999654322111100
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcc
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
.......|. |. .+...+...+++.+||..||++|||++|+|+||||
T Consensus 220 ------------------~~~~~~~~~--~~--------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 220 ------------------KAGAYDYPS--PE--------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp ------------------HHTCCCCCT--TT--------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred ------------------HhccccCCc--hh--------------hcccCHHHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 000000000 00 00111122367888899999999999999999999
Q ss_pred cCCCC
Q 002174 937 SSDVS 941 (956)
Q Consensus 937 ~~~~~ 941 (956)
.+...
T Consensus 266 ~~~~~ 270 (284)
T 3kk8_A 266 CNRER 270 (284)
T ss_dssp HSCCC
T ss_pred cCChh
Confidence 76554
No 117
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.8e-39 Score=361.31 Aligned_cols=273 Identities=22% Similarity=0.313 Sum_probs=212.1
Q ss_pred ccccHHHHHHHhcCCCCC-CeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcC-CCceeeee
Q 002174 612 RSFTYGEMALATNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH-HRNLVSLV 686 (956)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~ 686 (956)
+...++......++|.+. +.||+|+||+||+|... +++.||+|++.... ......+.+|+.+++++. ||||++++
T Consensus 16 ~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~ 95 (327)
T 3lm5_A 16 ENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLH 95 (327)
T ss_dssp CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEE
T ss_pred hhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEE
Confidence 345566667778888887 88999999999999975 68999999987533 233568899999999994 69999999
Q ss_pred cccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCc
Q 002174 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFT 763 (956)
Q Consensus 687 ~~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~ 763 (956)
+++...+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.
T Consensus 96 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~ 172 (327)
T 3lm5_A 96 EVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGD 172 (327)
T ss_dssp EEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCC
T ss_pred EEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCc
Confidence 99999999999999999999999997665667999999999999999999999999 999999999999998 789
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHH
Q 002174 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 843 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~ 843 (956)
+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 173 ~kL~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~ 244 (327)
T 3lm5_A 173 IKIVDFGMSRKIGHAC--------ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN 244 (327)
T ss_dssp EEECCGGGCEEC-----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred EEEeeCccccccCCcc--------ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence 9999999998764221 12345699999999999999999999999999999999999999975443221111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCC
Q 002174 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEET 923 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~ 923 (956)
.. .......+... +.......+++.+||..||++
T Consensus 245 i~-----------------------------~~~~~~~~~~~-----------------~~~~~~~~~li~~~L~~dP~~ 278 (327)
T 3lm5_A 245 IS-----------------------------QVNVDYSEETF-----------------SSVSQLATDFIQSLLVKNPEK 278 (327)
T ss_dssp HH-----------------------------HTCCCCCTTTT-----------------TTSCHHHHHHHHHHSCSSGGG
T ss_pred HH-----------------------------hcccccCchhh-----------------cccCHHHHHHHHHHcCCChhh
Confidence 10 00000000000 011112236778888889999
Q ss_pred CCCCcCCCCCCcccCCCC
Q 002174 924 PPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 924 R~sa~e~L~HP~f~~~~~ 941 (956)
|||++|+|+||||.....
T Consensus 279 Rpt~~~ll~h~~~~~~~~ 296 (327)
T 3lm5_A 279 RPTAEICLSHSWLQQWDF 296 (327)
T ss_dssp SCCHHHHTTCGGGCCCCT
T ss_pred CcCHHHHhCCHhhccccc
Confidence 999999999999876544
No 118
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-39 Score=349.96 Aligned_cols=258 Identities=29% Similarity=0.482 Sum_probs=215.8
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
..++|++.+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEF 84 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeC
Confidence 3467888999999999999999998889999999986443 346899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 158 (267)
T 3t9t_A 85 MEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-- 158 (267)
T ss_dssp CTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH--
T ss_pred CCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc--
Confidence 9999999999764 345889999999999999999999999 9999999999999999999999999998653211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
........++..|+|||++.+..++.++||||||+++|||++ |+.||....... ... .+..+...
T Consensus 159 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~---------~i~~~~~~ 224 (267)
T 3t9t_A 159 ----YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE-VVE---------DISTGFRL 224 (267)
T ss_dssp ----HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHH---------HHHTTCCC
T ss_pred ----ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHH-HHH---------HHhcCCcC
Confidence 111223456788999999999999999999999999999999 899997544321 111 11112222
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+...+..+.+++.+|++.+|.+||++.++++.|+++.+
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 3355567789999999999999999999999999998764
No 119
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6.9e-39 Score=357.09 Aligned_cols=270 Identities=17% Similarity=0.237 Sum_probs=214.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||+||+|.. .+++.||||++..... .+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36788999999999999999996 4789999999875432 23688999999999 99999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc-----EEEEeecccccc
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 775 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~DfGla~~~ 775 (956)
|+ +++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++..
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999764 346899999999999999999999999 999999999999999887 999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc--hhHHHHHHHhhcccchh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK--NIVREVNIAYQSSMMFS 853 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~--~~~~~~~~~~~~~~~~~ 853 (956)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+.......... .
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~-~- 238 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKR-A- 238 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHH-H-
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhc-c-
Confidence 5433222112222345679999999999999999999999999999999999999997532 22221111100000 0
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 905 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~ 905 (956)
.........++ ++.+++..||+.+|.+||++.++.+.|+++.......
T Consensus 239 ---~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 239 ---TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp ---SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred ---CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 00000011234 8999999999999999999999999999887765443
No 120
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8e-39 Score=356.91 Aligned_cols=277 Identities=27% Similarity=0.433 Sum_probs=213.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCC-----CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|++.+.||+|+||+||+|.... +..||||+++... ......+.+|++++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778899999999999998642 3469999987643 334567899999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 123 IITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999999764 345899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
..... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+.
T Consensus 199 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~-~~~---------~~~ 264 (333)
T 1mqb_A 199 DDPEA----TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-VMK---------AIN 264 (333)
T ss_dssp ----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHH---------HHH
T ss_pred ccccc----ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH-HHH---------HHH
Confidence 32210 111223346788999999999999999999999999999999 999997544321 111 112
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ 925 (956)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+++.... +.+..+..++|..|+
T Consensus 265 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~--------~~~~~~~~~~p~~~~ 326 (333)
T 1mqb_A 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP--------DSLKTLADFDPRVSI 326 (333)
T ss_dssp TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG--------GGGGSBCCC------
T ss_pred CCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc--------hhhhhhcCCCccchh
Confidence 22233445667788999999999999999999999999999887542 445566777776655
No 121
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=6.4e-39 Score=351.69 Aligned_cols=270 Identities=19% Similarity=0.249 Sum_probs=215.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .+.+.+|+++++++ +|+|++++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999996 5799999999875332 23678899999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc-----EEEEeecccccc
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADFGLSRLA 775 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~DfGla~~~ 775 (956)
|+ +++|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++. +||+|||+++..
T Consensus 87 ~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~ 161 (298)
T 1csn_A 87 LL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 161 (298)
T ss_dssp CC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred ec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence 99 999999997643 35899999999999999999999999 999999999999987776 999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcccchh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFS 853 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~ 853 (956)
.........+........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---- 237 (298)
T 1csn_A 162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKK---- 237 (298)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHH----
T ss_pred ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhc----
Confidence 54432222122233456799999999999999999999999999999999999999976322 111111110000
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
...........++..+.+++.+||+.+|.+||++.++++.|+++.+....
T Consensus 238 -~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~ 287 (298)
T 1csn_A 238 -QSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNT 287 (298)
T ss_dssp -HHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTC
T ss_pred -cCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCC
Confidence 00000011224567899999999999999999999999999998876543
No 122
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=8.1e-40 Score=380.03 Aligned_cols=200 Identities=29% Similarity=0.435 Sum_probs=175.8
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888999999999999999975 799999999875322 22457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999999653 45899999999999999999999999 9999999999999999999999999998754321
Q ss_pred CCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
......||+.|+|||++.+..+ +.++||||+||++|||++|+.||....
T Consensus 171 --------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 171 --------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp --------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred --------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 2234569999999999998765 678999999999999999999997543
No 123
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=6.5e-40 Score=370.03 Aligned_cols=295 Identities=20% Similarity=0.318 Sum_probs=212.4
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467889999999999999999975 68999999987643 3345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|+++++|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++.....
T Consensus 112 ~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-- 184 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-- 184 (360)
T ss_dssp CCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHH--
T ss_pred CCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCccccc--
Confidence 999999999997653 488999999999999999999986 8 99999999999999999999999999865421
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||............ .. ...+..
T Consensus 185 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--~~-----~~~~~~ 250 (360)
T 3eqc_A 185 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF--GC-----QVEGDA 250 (360)
T ss_dssp -------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHH--C------------
T ss_pred -------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh--cc-----cccccC
Confidence 1223456899999999999999999999999999999999999999765432211110 00 000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh-hCCC--CCCCCcccccccCCCCCCCCCCCcCCCCCCcc
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MMPE--SDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~-~~~~--~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
...+.... ...... .-+..+........++.+.+..... ..+. ......+|+.+||..||++|||++|+|+||||
T Consensus 251 ~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 328 (360)
T 3eqc_A 251 AETPPRPR-TPGRPL-NKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 328 (360)
T ss_dssp -------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred CCCCCCcc-cCCCcc-cccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHh
Confidence 00000000 000000 0011111112233333333322111 0111 12234689999999999999999999999999
Q ss_pred cCCC
Q 002174 937 SSDV 940 (956)
Q Consensus 937 ~~~~ 940 (956)
....
T Consensus 329 ~~~~ 332 (360)
T 3eqc_A 329 KRSD 332 (360)
T ss_dssp HHHH
T ss_pred hcch
Confidence 6543
No 124
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=9.8e-40 Score=358.44 Aligned_cols=286 Identities=27% Similarity=0.413 Sum_probs=210.8
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
++|++.+.||+|+||.||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57889999999999999999975 6899999998754322 23578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++ ++|.+++.......+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 996 79999998776667899999999999999999999999 9999999999999999999999999998654321
Q ss_pred CCccccceecccccCCCcccccccccCC-CCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......+|+.|+|||.+.+.. ++.++|||||||++|||++|+.||.......................
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---- 227 (299)
T 2r3i_A 158 ------RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV---- 227 (299)
T ss_dssp ------BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT----
T ss_pred ------cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhh----
Confidence 1123346899999999998765 78999999999999999999999976544322211110000000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
.+. +...+..+|.+..... ..+....+..+....+++.+||..||++|||++|+|+||||.+.
T Consensus 228 --~~~-------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 228 --WPG-------------VTSMPDYKPSFPKWAR--QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290 (299)
T ss_dssp --STT-------------GGGSTTCCTTSCCCCC--CCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred --hhH-------------hhcCcccchhhhcccc--hhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence 000 0001111111100000 00011122333445689999999999999999999999999764
Q ss_pred CC
Q 002174 940 VS 941 (956)
Q Consensus 940 ~~ 941 (956)
..
T Consensus 291 ~~ 292 (299)
T 2r3i_A 291 TK 292 (299)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 125
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.4e-38 Score=348.39 Aligned_cols=257 Identities=21% Similarity=0.342 Sum_probs=207.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|.+.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 467888999999999999999976 5889999998653 233456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999987643 5889999999999999999999999 999999999999999999999999999875422
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. .......||+.|+|||.+.+..++.++||||||+++|||++|+.||............ ...
T Consensus 169 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~----------~~~- 230 (294)
T 2rku_A 169 G-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI----------KKN- 230 (294)
T ss_dssp T-------CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH----------HTT-
T ss_pred c-------cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----------hhc-
Confidence 1 1123456899999999999999999999999999999999999999754321111100 000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
....+.. .+....+++.+||..||++|||++|+++||||.+
T Consensus 231 ~~~~~~~---------------------------------------~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 231 EYSIPKH---------------------------------------INPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp CCCCCTT---------------------------------------SCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred cCCCccc---------------------------------------cCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 0001110 0111235777889999999999999999999976
Q ss_pred CCC
Q 002174 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
...
T Consensus 272 ~~~ 274 (294)
T 2rku_A 272 GYI 274 (294)
T ss_dssp SCC
T ss_pred CCc
Confidence 544
No 126
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.2e-39 Score=364.91 Aligned_cols=278 Identities=18% Similarity=0.199 Sum_probs=211.7
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCC------CcEEEEEEecCCChhhH-----------HHHHHHHHHHHhcCCCceee
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQGE-----------KEFLTEIQFLSRLHHRNLVS 684 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~nIv~ 684 (956)
..++|++.+.||+|+||+||+|.+.+ ++.||||++........ ..+..|+..++.++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999999754 47899999876542211 12345666778888999999
Q ss_pred eecccccC----CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-
Q 002174 685 LVGYCDEE----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD- 759 (956)
Q Consensus 685 l~~~~~~~----~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~- 759 (956)
+++++... ...++||||+ +++|.+++... ...+++..++.|+.||+.||+|||+++ |+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~ 187 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNY 187 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEES
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEec
Confidence 99998654 4589999999 99999999764 346999999999999999999999999 99999999999999
Q ss_pred -CCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchh
Q 002174 760 -HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 838 (956)
Q Consensus 760 -~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~ 838 (956)
.++.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~ 267 (364)
T 3op5_A 188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD 267 (364)
T ss_dssp SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC
T ss_pred CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC
Confidence 8899999999999876533211111112223456999999999999999999999999999999999999999743221
Q ss_pred HHH---HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCC
Q 002174 839 VRE---VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 907 (956)
Q Consensus 839 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~ 907 (956)
... ....+. ..+..+++..+. +..++.++.+++..||..+|.+||++.++++.|+++.........
T Consensus 268 ~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~~ 336 (364)
T 3op5_A 268 PKYVRDSKIRYR-ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIGSKDD 336 (364)
T ss_dssp HHHHHHHHHHHH-HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHhh-hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcCCCcC
Confidence 111 111111 111222221111 123457889999999999999999999999999998876544433
No 127
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.7e-40 Score=367.23 Aligned_cols=285 Identities=22% Similarity=0.350 Sum_probs=203.2
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhh-----HHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-----EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
..++|++.+.||+|+||.||+|... +|+.||||++....... .+.+.+|++++++++||||+++++++.+.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4578999999999999999999975 68999999987533221 24678999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++ +|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 88 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp EEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred EEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 999999975 899988654 346889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|..||........ ....+....
T Consensus 163 ~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~-~~~i~~~~~---- 230 (346)
T 1ua2_A 163 GSPN-------RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ-LTRIFETLG---- 230 (346)
T ss_dssp TSCC-------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHC----
T ss_pred cCCc-------ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHcC----
Confidence 4322 122345689999999999764 588899999999999999999988865543222 111111000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCC
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
.......+..+ .+.. ......+|... + ....+.......++|.+||..||++|||++|+|+||
T Consensus 231 -~~~~~~~~~~~-----~~~~---~~~~~~~~~~~-----~---~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 231 -TPTEEQWPDMC-----SLPD---YVTFKSFPGIP-----L---HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp -CCCTTTSSSTT-----SSTT---CCCCCCCCCCC-----H---HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred -CCChhhhhhhc-----cCcc---cccccccCCCC-----h---HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 00000000000 0000 00000111100 0 011223334456799999999999999999999999
Q ss_pred cccCCC
Q 002174 935 YVSSDV 940 (956)
Q Consensus 935 ~f~~~~ 940 (956)
||.+..
T Consensus 294 ~f~~~~ 299 (346)
T 1ua2_A 294 YFSNRP 299 (346)
T ss_dssp GGTSSS
T ss_pred hhhcCC
Confidence 997643
No 128
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=6.7e-39 Score=357.84 Aligned_cols=265 Identities=25% Similarity=0.483 Sum_probs=217.5
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeC--------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccc
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 690 (956)
...++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 34678999999999999999999863 46789999997643 33456789999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCC--------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccE
Q 002174 691 EEGEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 691 ~~~~~~LV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 756 (956)
..+..++||||+++|+|.+++..... ..+++..++.++.||++||+|||+.+ |+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceE
Confidence 99999999999999999999976432 24889999999999999999999999 99999999999
Q ss_pred EEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCC
Q 002174 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~ 835 (956)
+++.++.+||+|||+++....... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 263 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 263 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSS-----EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred EEcCCCCEEEcccccccccccccc-----ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcC
Confidence 999999999999999987643221 112233457789999999999899999999999999999999 99999754
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 836 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
.. .+.... +..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++....+
T Consensus 264 ~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~ 321 (334)
T 2pvf_A 264 PV-EELFKL---------LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT 321 (334)
T ss_dssp CH-HHHHHH---------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred CH-HHHHHH---------HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccc
Confidence 32 111111 11122234456677889999999999999999999999999999877544
No 129
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2e-39 Score=353.59 Aligned_cols=257 Identities=24% Similarity=0.368 Sum_probs=199.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|.+.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 367889999999999999999965 68999999987543 2345788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeecccccc
Q 002174 701 FMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLA 775 (956)
Q Consensus 701 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~ 775 (956)
|+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999999988643 2356899999999999999999999999 9999999999999 45688999999999765
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... .......||+.|+|||.+. ..++.++|||||||++|||++|+.||...............
T Consensus 178 ~~~--------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~-------- 240 (285)
T 3is5_A 178 KSD--------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYK-------- 240 (285)
T ss_dssp -----------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--------
T ss_pred CCc--------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccC--------
Confidence 422 1223456899999999985 56889999999999999999999999754321111000000
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCc
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
........++- .+...+++.+||..||++|||++|+|+|||
T Consensus 241 ---------------------~~~~~~~~~~~------------------~~~~~~li~~~L~~dP~~Rps~~e~l~hp~ 281 (285)
T 3is5_A 241 ---------------------EPNYAVECRPL------------------TPQAVDLLKQMLTKDPERRPSAAQVLHHEW 281 (285)
T ss_dssp ---------------------CCCCCC--CCC------------------CHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred ---------------------CcccccccCcC------------------CHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence 00000001111 112236788899999999999999999999
Q ss_pred ccC
Q 002174 936 VSS 938 (956)
Q Consensus 936 f~~ 938 (956)
|..
T Consensus 282 f~~ 284 (285)
T 3is5_A 282 FKQ 284 (285)
T ss_dssp GGC
T ss_pred hhc
Confidence 975
No 130
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.6e-39 Score=355.26 Aligned_cols=271 Identities=25% Similarity=0.429 Sum_probs=220.9
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEe------CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeee
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSL 685 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l 685 (956)
+...++....++|++.+.||+|+||+||+|.+ .+++.||||++..... ...+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44556667788999999999999999999984 3468999999976443 3346789999999999 79999999
Q ss_pred ecccccCC-cEEEEEecCCCCCHHHHHhhcCC--------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccC
Q 002174 686 VGYCDEEG-EQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRD 750 (956)
Q Consensus 686 ~~~~~~~~-~~~LV~E~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~D 750 (956)
++++...+ ..++||||+++|+|.+++..... ..+++..++.++.|+++||.|||+.+ |+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence 99987654 58999999999999999976542 23899999999999999999999999 99999
Q ss_pred CCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CC
Q 002174 751 IKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GM 829 (956)
Q Consensus 751 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~ 829 (956)
|||+||+++.++.+||+|||+++...... .........||+.|+|||++.+..++.++|||||||++|||++ |+
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~ 248 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDP-----DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCT-----TSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred CccceEEECCCCCEEECCCccccccccCc-----cceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999998654322 1122334567889999999999999999999999999999998 99
Q ss_pred CCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 830 QPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 830 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.||............ +..+.....+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 249 ~p~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 249 SPYPGVKIDEEFCRR---------LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp CSSTTCCCSHHHHHH---------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccchhHHHHHH---------hccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 999754432221111 111222334555677899999999999999999999999999988654
No 131
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.1e-40 Score=368.94 Aligned_cols=248 Identities=23% Similarity=0.308 Sum_probs=192.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHH-HHhcCCCceeeeecccccCCcEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||+||+|+.+ +++.||||+++.... .....+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357889999999999999999975 589999999875432 223456677776 577899999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999997643 4788899999999999999999999 99999999999999999999999999986432
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +..... ...
T Consensus 192 ~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i---------~~~ 254 (373)
T 2r5t_A 192 HN-------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNI---------LNK 254 (373)
T ss_dssp CC-------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHH---------HHS
T ss_pred CC-------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHH---------Hhc
Confidence 11 1234567999999999999999999999999999999999999999754432 211111 111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
...++...+..+.+++.+|++.+|.+||++.+.+.
T Consensus 255 -~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~ 289 (373)
T 2r5t_A 255 -PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 289 (373)
T ss_dssp -CCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHH
T ss_pred -ccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHH
Confidence 11234445567777888888888888888754433
No 132
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.9e-40 Score=388.41 Aligned_cols=264 Identities=30% Similarity=0.466 Sum_probs=219.3
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 616 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.+++.+..++|++.+.||+|+||.||+|.+.++..||||+++.... ..++|.+|+++|++++|+||+++++++.+ +..
T Consensus 259 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~ 336 (535)
T 2h8h_A 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI 336 (535)
T ss_dssp TTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred ccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccc
Confidence 3445566788999999999999999999998888899999986443 35689999999999999999999999876 678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.++++......+++..++.|+.||++||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 413 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLI 413 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTC
T ss_pred eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceec
Confidence 99999999999999997644455889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+
T Consensus 414 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~-~~~---------~i 477 (535)
T 2h8h_A 414 EDNE------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLD---------QV 477 (535)
T ss_dssp CCHH------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHH-HHH---------HH
T ss_pred CCCc------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HH
Confidence 3211 111123346788999999999999999999999999999999 999997544321 111 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+.....+..++..+.+++.+||+.+|++||++.++++.|+++..
T Consensus 478 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 478 ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 1222334566778899999999999999999999999999998754
No 133
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.8e-39 Score=370.92 Aligned_cols=196 Identities=24% Similarity=0.363 Sum_probs=162.3
Q ss_pred cCCCCC-CeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHh-cCCCceeeeeccccc----CCcEE
Q 002174 624 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE----EGEQM 696 (956)
Q Consensus 624 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~----~~~~~ 696 (956)
++|.+. +.||+|+||+||+|... +++.||||++... ..+.+|++++.+ .+||||+++++++.. .+..+
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456555 68999999999999975 6899999998642 356788888744 589999999998864 56789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeecccc
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 773 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGla~ 773 (956)
+||||+++|+|.+++.......+++..++.|+.||+.||.|||+.+ |+||||||+|||++. ++.+||+|||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 9999999999999998766667999999999999999999999999 999999999999998 7899999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 213 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 213 ETTSH--------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp ECC-------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccCCC--------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 65321 1223456899999999999999999999999999999999999999653
No 134
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3.4e-39 Score=365.47 Aligned_cols=285 Identities=21% Similarity=0.326 Sum_probs=204.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCC------
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 693 (956)
.++|++.+.||+|+||.||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 368999999999999999999965 6899999998753 2334567889999999999999999999986654
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||++ |+|.+++.. .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 7899999996 689888853 3788999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||............
T Consensus 176 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i--------- 238 (371)
T 2xrw_A 176 TAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV--------- 238 (371)
T ss_dssp ----------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH---------
T ss_pred ccccc--------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---------
Confidence 65321 1223456899999999999999999999999999999999999999765543322211
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhHhhCCCC-------CCCCcccccccCCCCCCCCC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPES-------DTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L~~~~~~~~~~-------~~~~~~ll~~~L~~dP~~R~ 925 (956)
+ ...+..+++....+...+.......|... .++.+.... . .++.. ...+.+|+.+||..||++||
T Consensus 239 -~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~ 311 (371)
T 2xrw_A 239 -I-EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPD---V--LFPADSEHNKLKASQARDLLSKMLVIDASKRI 311 (371)
T ss_dssp -H-C-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCG---G--GSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSC
T ss_pred -H-HHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhccc---c--cCcccccccccccHHHHHHHHHHCcCChhhCC
Confidence 1 11222233333322222222222222211 122211100 0 01110 12345899999999999999
Q ss_pred CCcCCCCCCcccCC
Q 002174 926 SSSSMLKHPYVSSD 939 (956)
Q Consensus 926 sa~e~L~HP~f~~~ 939 (956)
|++|+|+||||+..
T Consensus 312 t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 312 SVDEALQHPYINVW 325 (371)
T ss_dssp CHHHHHHSHHHHTT
T ss_pred CHHHHhCCcchhhh
Confidence 99999999999753
No 135
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.1e-40 Score=371.04 Aligned_cols=277 Identities=21% Similarity=0.359 Sum_probs=195.4
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC------C
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 693 (956)
.++|++.+.||+|+||.||+|... +|+.||||++... .....+.+.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 368999999999999999999964 6899999998753 333456888999999999999999999998543 5
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 7899998864 35899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... +......
T Consensus 181 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~----- 244 (367)
T 2fst_X 181 HTAD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILR----- 244 (367)
T ss_dssp --------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH-----
T ss_pred cccc----------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-----
Confidence 6432 1234568999999999987 678999999999999999999999997654322 2221111
Q ss_pred hhccCCCCCCChHHHH-----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCC
Q 002174 853 SVIDGNMGSYPSECVE-----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS 927 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~-----~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa 927 (956)
. .+..+.+... .....+. .+...| +..+. ..++...+.+.+||.+||+.||++|+|+
T Consensus 245 -~----~g~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~----------~~~~~~~~~~~dLl~~mL~~dP~~R~t~ 306 (367)
T 2fst_X 245 -L----VGTPGAELLKKISSESARNYIQ-SLTQMP--KMNFA----------NVFIGANPLAVDLLEKMLVLDSDKRITA 306 (367)
T ss_dssp -H----HCSCCHHHHTTCCCHHHHHHHH-TSCCCC--CCCHH----------HHTTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred -H----hCCCCHHHHHHhhhHHHHHHHh-ccCCCC--CCCHH----------HHCCCCCHHHHHHHHHhCCCCcccCcCH
Confidence 0 0111111111 1111111 111111 12222 1234445566799999999999999999
Q ss_pred cCCCCCCcccCCC
Q 002174 928 SSMLKHPYVSSDV 940 (956)
Q Consensus 928 ~e~L~HP~f~~~~ 940 (956)
+|+|+||||....
T Consensus 307 ~e~L~hp~~~~~~ 319 (367)
T 2fst_X 307 AQALAHAYFAQYH 319 (367)
T ss_dssp HHHHTSGGGTTTC
T ss_pred HHHhcChhhhhcc
Confidence 9999999997643
No 136
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=374.18 Aligned_cols=295 Identities=24% Similarity=0.322 Sum_probs=194.2
Q ss_pred cCCCC-CCeeeeeCCeeEEEEEeC---CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccc--ccCCcEEE
Q 002174 624 NNFNS-STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC--DEEGEQML 697 (956)
Q Consensus 624 ~~~~~-~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~~~L 697 (956)
+.|++ .++||+|+||+||+|..+ +++.||||++..... ...+.+|++++++++||||+++++++ ......++
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 44655 458999999999999965 578999999975432 24688999999999999999999999 45678999
Q ss_pred EEecCCCCCHHHHHhhc-------CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE----cCCCcEEE
Q 002174 698 VYEFMSNGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKV 766 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl 766 (956)
||||++ |+|.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999995 6898887532 1234899999999999999999999999 9999999999999 77889999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhH------
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIV------ 839 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~------ 839 (956)
+|||+|+....... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||.......
T Consensus 174 ~Dfg~a~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~ 249 (405)
T 3rgf_A 174 ADMGFARLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY 249 (405)
T ss_dssp CCTTCCC--------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCC
T ss_pred EECCCceecCCCCc----ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccc
Confidence 99999987643211 11223446789999999999874 58999999999999999999999996543210
Q ss_pred --HHHHHHhhcccchhhccCCCCCCChHH--HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccc
Q 002174 840 --REVNIAYQSSMMFSVIDGNMGSYPSEC--VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINS 915 (956)
Q Consensus 840 --~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~ 915 (956)
+.....+ ..+.......-... ......+.. .+...........+ .++ ......+..+.+||.+
T Consensus 250 ~~~~l~~i~------~~~g~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~Ll~~ 316 (405)
T 3rgf_A 250 HHDQLDRIF------NVMGFPADKDWEDIKKMPEHSTLMK-DFRRNTYTNCSLIK---YME---KHKVKPDSKAFHLLQK 316 (405)
T ss_dssp CHHHHHHHH------HHHCCCCTTTCGGGGGSTTHHHHHH-HCCGGGGTTCCHHH---HHH---TTTCCTTSHHHHHHHH
T ss_pred hHHHHHHHH------HhhCCCChhhcchhhcCcchhhhhh-hccccCCCcchhhh---hHh---hcCCCCCHHHHHHHHH
Confidence 1111100 00000000000000 000000000 01111111111111 111 1122335566789999
Q ss_pred cCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 916 EHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 916 ~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
||++||++|||++|+|+||||.+...
T Consensus 317 ~L~~dP~~R~ta~e~L~hp~f~~~~~ 342 (405)
T 3rgf_A 317 LLTMDPIKRITSEQAMQDPYFLEDPL 342 (405)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTSSSC
T ss_pred HccCCcccCCCHHHHhcChhhccCCC
Confidence 99999999999999999999987654
No 137
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=4.1e-39 Score=359.36 Aligned_cols=266 Identities=24% Similarity=0.394 Sum_probs=216.5
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeCC------CcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeeccc
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYC 689 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~ 689 (956)
++....++|++.+.||+|+||+||+|.... .+.||+|.+.... ....+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 455667899999999999999999999642 2489999997643 33456789999999999 899999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcC------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEE
Q 002174 690 DEEGEQMLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 757 (956)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NIL 757 (956)
...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence 99999999999999999999997532 345789999999999999999999999 999999999999
Q ss_pred EcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCc
Q 002174 758 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (956)
Q Consensus 758 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~ 836 (956)
++.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 271 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDS-----NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL 271 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCT-----TSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred ECCCCeEEECcccccccccccc-----ceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc
Confidence 9999999999999998654322 1112234457889999999999999999999999999999999 999997543
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 837 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
......... . .+.....+..++..+.+++..||+.+|.+||++.++++.|+++..
T Consensus 272 ~~~~~~~~~-~--------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 272 VNSKFYKLV-K--------DGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp SSHHHHHHH-H--------HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHH-h--------cCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 322111111 0 111122344556789999999999999999999999999988754
No 138
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.7e-39 Score=365.22 Aligned_cols=291 Identities=22% Similarity=0.276 Sum_probs=211.2
Q ss_pred cHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCCh-----------hhHHHHHHHHHHHHhcCCCcee
Q 002174 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-----------QGEKEFLTEIQFLSRLHHRNLV 683 (956)
Q Consensus 615 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~h~nIv 683 (956)
...++....++|++.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 35677888999999999999999999999988899999998864221 1236889999999999999999
Q ss_pred eeecccc-----cCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002174 684 SLVGYCD-----EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 684 ~l~~~~~-----~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
++++++. .....++||||++ |+|.+++... ...+++..++.++.||+.||.|||+.+ |+||||||+||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL 167 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence 9999983 3346899999996 7999988754 346899999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCch
Q 002174 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~ 837 (956)
+.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 239 (362)
T 3pg1_A 168 ADNNDITICDFNLAREDTAD--------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF 239 (362)
T ss_dssp CTTCCEEECCTTC-----------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cCCCCEEEEecCcccccccc--------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH
Confidence 99999999999999754321 12234568899999999987 6789999999999999999999999976543
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHH-----HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccc
Q 002174 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECV-----EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEF 912 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~l 912 (956)
... ...... .. +..+.+.. ....+.........|..+ .....+..++...++
T Consensus 240 ~~~-~~~i~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l 296 (362)
T 3pg1_A 240 YNQ-LNKIVE------VV----GTPKIEDVVMFSSPSARDYLRNSLSNVPARA------------WTAVVPTADPVALDL 296 (362)
T ss_dssp HHH-HHHHHH------HH----CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCC------------HHHHSTTSCHHHHHH
T ss_pred HHH-HHHHHH------Hc----CCCChHHhhhccchhhhHHHHhhcccCChhh------------HHhhCCCCCHHHHHH
Confidence 221 111110 00 01111110 011111111111111110 111223344556689
Q ss_pred ccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 913 INSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 913 l~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+.+||..||++|||++|+|+||||++-..
T Consensus 297 i~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 325 (362)
T 3pg1_A 297 IAKMLEFNPQRRISTEQALRHPYFESLFD 325 (362)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred HHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence 99999999999999999999999987644
No 139
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.4e-39 Score=363.77 Aligned_cols=257 Identities=21% Similarity=0.350 Sum_probs=199.9
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
..++|++.+.||+|+||+||+|..+ +++.||||++..... ...+|++++.++ +||||+++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3567999999999999999999975 689999999976432 234688888888 7999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC----CcEEEEeecccccc
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRLA 775 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~----~~~kl~DfGla~~~ 775 (956)
||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+.++ +.+||+|||+++..
T Consensus 96 E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 96 ELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred eCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999999764 35899999999999999999999999 9999999999998543 35999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch-hHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~-~~~~~~~~~~~~~~~~~ 854 (956)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...
T Consensus 171 ~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~-------------- 229 (342)
T 2qr7_A 171 RAEN-------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE-------------- 229 (342)
T ss_dssp BCTT-------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHH--------------
T ss_pred cCCC-------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHH--------------
Confidence 4321 122345689999999999988899999999999999999999999964321 000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCC
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
++.+.+...-...+.. ..+.....+.+++.+||..||++|||++|+++||
T Consensus 230 --------------~~~~~i~~~~~~~~~~----------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp 279 (342)
T 2qr7_A 230 --------------EILARIGSGKFSLSGG----------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279 (342)
T ss_dssp --------------HHHHHHHHCCCCCCST----------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred --------------HHHHHHccCCcccCcc----------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCC
Confidence 0001011000000000 0011122334788889999999999999999999
Q ss_pred cccC
Q 002174 935 YVSS 938 (956)
Q Consensus 935 ~f~~ 938 (956)
||..
T Consensus 280 ~~~~ 283 (342)
T 2qr7_A 280 WIVH 283 (342)
T ss_dssp HHHT
T ss_pred eecC
Confidence 9954
No 140
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-38 Score=352.15 Aligned_cols=265 Identities=23% Similarity=0.307 Sum_probs=210.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCC--cEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~LV 698 (956)
.++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 367889999999999999999976 589999999875432 33567889999999999999999999986654 78999
Q ss_pred EecCCCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE----cCCCcEEEEeecccc
Q 002174 699 YEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 773 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~DfGla~ 773 (956)
|||+++|+|.+++..... ..+++..++.++.|+++||+|||+.+ |+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 999999999999976432 34899999999999999999999999 9999999999999 888899999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccc--------cCCCCCcccEeehHHHHHHHHhCCCCCCCCch---hHHHH
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--------THKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREV 842 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~---~~~~~ 842 (956)
...... ......||+.|+|||++. +..++.++|||||||++|||++|+.||..... .....
T Consensus 165 ~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~ 236 (319)
T 4euu_A 165 ELEDDE--------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236 (319)
T ss_dssp ECCTTC--------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHH
T ss_pred ecCCCC--------ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHH
Confidence 764322 123456899999999986 57789999999999999999999999964222 11211
Q ss_pred HHHhhcc---cchhh---------ccCC---CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002174 843 NIAYQSS---MMFSV---------IDGN---MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 843 ~~~~~~~---~~~~~---------~~~~---~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
....... ....+ ..+. ....+......+.+++.+|++.||++||+++++++...+.
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 1111110 00000 0001 1134578888999999999999999999999999887754
No 141
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.1e-39 Score=372.57 Aligned_cols=334 Identities=16% Similarity=0.215 Sum_probs=283.1
Q ss_pred CCCCCCCCceeecCCC---CCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccC-CccccCCcccchhh
Q 002174 61 DPCTSNWTGVLCFNTT---MDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSI-PKEIGNIKSLELLL 136 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~---~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 136 (956)
..|.|.+..|.|.+.. .+....+++.|+|++|.+++..+..|+++++|++|+|++|.+.+.+ +..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 3454444458887643 2234468999999999999998999999999999999999998655 56799999999999
Q ss_pred ccCCCCCCCCCcccCCCccccceeeccccccCCCCcc--ccccccCCeeecccCcccCCCccc-cCCccccceecccccc
Q 002174 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKS--FANLNKTRHFHMNNNSISGQIPPE-LSRLPSLVHMLLDNNN 213 (956)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~L~~N~ 213 (956)
|++|++++..|..|+++++|++|+|++|++++.++.. |.++++|++|+|++|++++..|.. +.++++|++|+|++|+
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999889999999999999999999999866555 999999999999999999887876 8999999999999999
Q ss_pred ccCCCCcccCCc----------------------------------chhhhhcccCCcCCCCCCchhccC----------
Q 002174 214 LTGYLPPELSEL----------------------------------PKLLILQLDNNNFEGTTIPASYSN---------- 249 (956)
Q Consensus 214 l~~~~p~~l~~l----------------------------------~~L~~L~Ls~N~l~~~~~p~~~~~---------- 249 (956)
+++..+..+..+ ++|++|+|++|++++ ..|..+..
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKE-SMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCH-HHHHHHHHHTTTCCEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccc-cchhhhhccccccceeeE
Confidence 998888776554 678888888888764 33333321
Q ss_pred -----------------------------CCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCc-cc
Q 002174 250 -----------------------------MSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-LN 298 (956)
Q Consensus 250 -----------------------------l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~ 298 (956)
.++|+.|++++|.+++..+. +..+++|++|+|++|++++..|..+.. .+
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 25789999999999887664 899999999999999999777766544 48
Q ss_pred cCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcE
Q 002174 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVT 376 (956)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~~~~l~~ 376 (956)
|++|+|++|.+++..|..|.++++|+.|+|++|++++..|..+..+. +|+.|+|++|+|++++... .++.++.
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 399 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLP-----NLKELALDTNQLKSVPDGIFDRLTSLQK 399 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCE
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccc-----cccEEECCCCccccCCHhHhccCCcccE
Confidence 99999999999999999999999999999999999988898887654 4569999999999998764 5899999
Q ss_pred EEecCCcccccCC-cccccCCCCCC
Q 002174 377 VRLRGNPFCLNTN-AEQFCGSHSDD 400 (956)
Q Consensus 377 l~l~~Np~~c~c~-~~~~~~~~~~~ 400 (956)
|++++|||.|+|+ +.++..|+..+
T Consensus 400 L~l~~N~l~~~~~~~~~l~~~l~~~ 424 (455)
T 3v47_A 400 IWLHTNPWDCSCPRIDYLSRWLNKN 424 (455)
T ss_dssp EECCSSCBCCCTTTTHHHHHHHHHT
T ss_pred EEccCCCcccCCCcchHHHHHHHhC
Confidence 9999999999998 56676777543
No 142
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=6.7e-39 Score=352.07 Aligned_cols=256 Identities=23% Similarity=0.364 Sum_probs=202.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHh--cCCCceeeeeccccc----CCcEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDE----EGEQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~----~~~~~ 696 (956)
.++|++.+.||+|+||+||+|.+ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.. ....+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 46899999999999999999998 6899999998643 34456667777666 799999999998643 35689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhh--------hcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
+||||+++|+|.++++. ..+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 83 lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECC
T ss_pred EehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEee
Confidence 99999999999999954 35899999999999999999999 777 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccccC------CCCCcccEeehHHHHHHHHhC----------CCCC
Q 002174 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 832 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlG~ll~elltg----------~~pf 832 (956)
||+|+........ .........||+.|+|||++.+. .++.++|||||||++|||++| +.||
T Consensus 157 fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 157 LGLAVMHSQSTNQ---LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp CTTCEEEETTTTE---EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred CCCeeeccccccc---ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 9999765432211 01112334699999999999876 455789999999999999999 7888
Q ss_pred CCCch---hHHHHHHHhhcccchhhccCCCCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002174 833 SHGKN---IVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 833 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
..... .......... ........ +..++..+.+++.+||+.+|.+||++.++++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVVC-------VDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCHHHHHHHHT-------TSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhHHHh-------ccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 54211 1111111110 11112222 346788999999999999999999999999999875
No 143
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-39 Score=361.46 Aligned_cols=285 Identities=25% Similarity=0.366 Sum_probs=209.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 357889999999999999999975 589999998865432 23466889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999998887543 34889999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......||+.|+|||++.+. .++.++|||||||++|||++|+.||................
T Consensus 179 -------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~---------- 241 (331)
T 4aaa_A 179 -------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCL---------- 241 (331)
T ss_dssp ------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH----------
T ss_pred -------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh----------
Confidence 122345689999999999875 78999999999999999999999997655433222111000
Q ss_pred CCCCChHHHHHHHHHHHH--hcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcc
Q 002174 859 MGSYPSECVEKFIKLALK--CCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~--c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
+..++.....+..-... ........+.... ...+.......+|+.+||..||++|||++|+|+||||
T Consensus 242 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f 310 (331)
T 4aaa_A 242 -GNLIPRHQELFNKNPVFAGVRLPEIKEREPLE----------RRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310 (331)
T ss_dssp -CSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHH----------HHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred -CCCChhhhhHhhhccccccccCccccccchhh----------hcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence 11111111111000000 0000001111111 1123334445689999999999999999999999999
Q ss_pred cCCC
Q 002174 937 SSDV 940 (956)
Q Consensus 937 ~~~~ 940 (956)
+.+.
T Consensus 311 ~~~~ 314 (331)
T 4aaa_A 311 QMDG 314 (331)
T ss_dssp HGGG
T ss_pred ccCC
Confidence 8764
No 144
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.1e-39 Score=348.24 Aligned_cols=257 Identities=27% Similarity=0.447 Sum_probs=183.8
Q ss_pred cCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5788899999999999999996 4799999999864322 12367899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 91 EMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp ECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred ecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 999999999999754 346899999999999999999999999 9999999999999999999999999998654221
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ........
T Consensus 167 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----------~~~~~~~~- 228 (278)
T 3cok_A 167 -------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT----------LNKVVLAD- 228 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------CCSSC-
T ss_pred -------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH----------HHHHhhcc-
Confidence 112335689999999999999999999999999999999999999965332100 00000000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
...|.. ......+++.+||..||++|||++|+++||||...
T Consensus 229 ~~~~~~---------------------------------------~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 229 YEMPSF---------------------------------------LSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp CCCCTT---------------------------------------SCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred cCCccc---------------------------------------cCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 000100 01122367888899999999999999999999765
Q ss_pred CC
Q 002174 940 VS 941 (956)
Q Consensus 940 ~~ 941 (956)
..
T Consensus 270 ~~ 271 (278)
T 3cok_A 270 SS 271 (278)
T ss_dssp --
T ss_pred CC
Confidence 43
No 145
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5e-39 Score=355.35 Aligned_cols=270 Identities=26% Similarity=0.437 Sum_probs=209.4
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccc
Q 002174 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (956)
Q Consensus 617 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 690 (956)
+++....++|.+.+.||+|+||.||+|... .++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 444556788999999999999999999853 34589999987542 334567899999999999999999999987
Q ss_pred cCC-----cEEEEEecCCCCCHHHHHhhc----CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC
Q 002174 691 EEG-----EQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 691 ~~~-----~~~LV~E~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
+.+ ..++||||+++|+|.+++... ....+++..++.++.|+++||.|||+.+ |+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCC
Confidence 654 359999999999999998542 3356899999999999999999999998 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHH
Q 002174 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 840 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~ 840 (956)
+.+||+|||+++....... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||........
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 258 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDY-----YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM 258 (313)
T ss_dssp SCEEECSCSCC---------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred CcEEEeecCcceecccccc-----cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHH
Confidence 9999999999986543221 112234457889999999999999999999999999999999 8888865443211
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 841 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
. ..+..+.....+..++..+.+++.+|+..+|.+||++.++++.|+++...+|+
T Consensus 259 ~----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp~ 312 (313)
T 3brb_A 259 Y----------DYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLPD 312 (313)
T ss_dssp H----------HHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC--
T ss_pred H----------HHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 1 11222333445666778899999999999999999999999999999887664
No 146
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-39 Score=368.61 Aligned_cols=281 Identities=21% Similarity=0.329 Sum_probs=202.6
Q ss_pred HHHhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc-------
Q 002174 620 ALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------- 691 (956)
Q Consensus 620 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------- 691 (956)
....++|++.+.||+|+||+||+|.. .+|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 34567899999999999999999996 4799999999875432 22469999999999999999999843
Q ss_pred -------------------------------CCcEEEEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHh
Q 002174 692 -------------------------------EGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYL 738 (956)
Q Consensus 692 -------------------------------~~~~~LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yL 738 (956)
....++||||++ |+|.+.+.. .....+++..++.++.||++||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFI 157 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 334889999997 688887764 3445689999999999999999999
Q ss_pred hhcCCCCEeccCCCcccEEEc-CCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEe
Q 002174 739 HTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVY 816 (956)
Q Consensus 739 H~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVw 816 (956)
|+.+ |+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+. .++.++|||
T Consensus 158 H~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 226 (383)
T 3eb0_A 158 HSLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE--------PSVAYICSRFYRAPELMLGATEYTPSIDLW 226 (383)
T ss_dssp HTTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS--------CCCCCCCCSSCCCHHHHTTCSSCCTHHHHH
T ss_pred HHCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC--------CCcCcccCCCccCHHHhcCCCCCCcchhhh
Confidence 9999 99999999999998 68899999999998654322 22345689999999998875 489999999
Q ss_pred ehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002174 817 SLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 817 SlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
|+||++|||++|+.||.............. . .+..+.+...... -......-|.... .
T Consensus 227 slG~il~ell~g~~pf~~~~~~~~~~~i~~-------~----~g~p~~~~~~~~~------~~~~~~~~~~~~~-----~ 284 (383)
T 3eb0_A 227 SIGCVFGELILGKPLFSGETSIDQLVRIIQ-------I----MGTPTKEQMIRMN------PHYTEVRFPTLKA-----K 284 (383)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-------H----HCCCCHHHHHHHC------TTC--CCCCCCCC-----C
T ss_pred hHHHHHHHHHhCCCCCCCCChHHHHHHHHH-------H----hCCCCHHHHHHhC------cccccccCCccCc-----c
Confidence 999999999999999976544322221110 0 0111111111100 0000000000000 0
Q ss_pred HhHhhCCC-CCCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 897 SIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 897 ~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
.+...++. ....+.+++.+||+.||++|+|++|+|+||||..
T Consensus 285 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 285 DWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp CHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred cHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 01111222 2334568999999999999999999999999964
No 147
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.1e-39 Score=351.07 Aligned_cols=252 Identities=23% Similarity=0.381 Sum_probs=198.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|... +++.||||++.... .....++.+|+..+.++ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 568999999999999999999976 79999999987532 33456788999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC---------------
Q 002174 699 YEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--------------- 761 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~--------------- 761 (956)
|||+++|+|.+++.... ...+++..++.++.||++||+|||+++ |+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 245899999999999999999999999 9999999999999844
Q ss_pred ----CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 762 ----FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 762 ----~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
..+||+|||.+....... ...||+.|+|||++.+. .++.++|||||||++|||++|..++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH
T ss_pred cCCceEEEEcccccccccCCcc-----------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh
Confidence 479999999998754321 23489999999999875 56689999999999999999987764332
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccc
Q 002174 837 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSE 916 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~ 916 (956)
.... +..+.....+..+ .....+++.+|
T Consensus 236 ~~~~-------------~~~~~~~~~~~~~---------------------------------------~~~~~~li~~~ 263 (289)
T 1x8b_A 236 QWHE-------------IRQGRLPRIPQVL---------------------------------------SQEFTELLKVM 263 (289)
T ss_dssp HHHH-------------HHTTCCCCCSSCC---------------------------------------CHHHHHHHHHH
T ss_pred HHHH-------------HHcCCCCCCCccc---------------------------------------CHHHHHHHHHH
Confidence 1110 1111111111111 11223577778
Q ss_pred CCCCCCCCCCCcCCCCCCcccCCC
Q 002174 917 HTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 917 L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
|..||++|||++|+++||||.+..
T Consensus 264 l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 264 IHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp TCSSGGGSCCHHHHHTCTTC----
T ss_pred hCCCcccCCCHHHHhhChHhhhhc
Confidence 888899999999999999998654
No 148
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2e-38 Score=354.14 Aligned_cols=202 Identities=24% Similarity=0.397 Sum_probs=177.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|.+.+.||+|+||.||++... +++.||+|++... .....+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 367888999999999999999975 5889999998653 233456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999998764 35889999999999999999999999 999999999999999999999999999875422
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
. .......||..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 195 ~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 245 (335)
T 2owb_A 195 G-------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245 (335)
T ss_dssp T-------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred c-------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence 1 11234568999999999999999999999999999999999999997543
No 149
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.3e-38 Score=347.46 Aligned_cols=264 Identities=31% Similarity=0.479 Sum_probs=209.4
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeCC----CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeeccc-ccCCcEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQML 697 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~L 697 (956)
.+|++.+.||+|+||+||+|.+.+ +..||+|.+.... ....+.+.+|++++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 467888999999999999998642 2368999987643 33457889999999999999999999985 55668899
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 105 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999999753 345789999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.... .........+|+.|+|||.+.+..++.++||||||+++|||++|..|+....+..+... .+..+
T Consensus 181 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~---------~~~~~ 248 (298)
T 3f66_A 181 KEYY---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV---------YLLQG 248 (298)
T ss_dssp GGGC---BC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH---------HHHTT
T ss_pred cchh---ccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH---------HHhcC
Confidence 2211 11223345678899999999999999999999999999999995554433322211111 11222
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
.....+..++..+.+++.+|++.+|.+||++.++++.|+++...+.
T Consensus 249 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 249 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 2333455567789999999999999999999999999999887654
No 150
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.5e-39 Score=359.24 Aligned_cols=268 Identities=26% Similarity=0.450 Sum_probs=219.9
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeee
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLV 686 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~ 686 (956)
+..+++....++|++.+.||+|+||.||+|.+. +++.||||.+.... ......+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 444566677889999999999999999999854 36889999997543 33456789999999999999999999
Q ss_pred cccccCCcEEEEEecCCCCCHHHHHhhcC--------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002174 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 687 ~~~~~~~~~~LV~E~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
+++.+.+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence 99999999999999999999999997532 245788999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCch
Q 002174 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 837 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~ 837 (956)
+.++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 246 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETD-----YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN 246 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGG-----CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH
T ss_pred cCCCeEEECcCcccccccccc-----ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH
Confidence 999999999999997653221 0112233457889999999999999999999999999999999 8888865432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
. .... .+..+.....+..++..+.+++.+|++.+|.+||++.++++.|++..
T Consensus 247 ~-~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 247 E-QVLR---------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp H-HHHH---------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred H-HHHH---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 2 1111 11222334455667788999999999999999999999999998753
No 151
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.9e-39 Score=356.61 Aligned_cols=273 Identities=27% Similarity=0.392 Sum_probs=216.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccc--cCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~ 695 (956)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++|+||+++++++. +....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46888999999999999999984 368899999998777666778999999999999999999999875 45678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 99999999999999997642 35899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHH-HHhh----ccc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN-IAYQ----SSM 850 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~-~~~~----~~~ 850 (956)
..... .........||..|+|||++.+..++.++|||||||++|||++|+.||........... .... ...
T Consensus 178 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 178 PLDKD----YYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL 253 (327)
T ss_dssp CTTCS----EEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHH
T ss_pred ccCCc----cceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHH
Confidence 43321 11122344588889999999999999999999999999999999999864322110000 0000 000
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
...+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.+.....
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 11122233345567788899999999999999999999999999998865443
No 152
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.4e-38 Score=352.60 Aligned_cols=271 Identities=27% Similarity=0.423 Sum_probs=214.8
Q ss_pred cCC-CCCCeeeeeCCeeEEEEEeC-----CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeeccccc--CCc
Q 002174 624 NNF-NSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGE 694 (956)
Q Consensus 624 ~~~-~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~ 694 (956)
++| ++.+.||+|+||+||++.+. +++.||||+++... ....+.+.+|++++++++||||+++++++.+ ...
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAAS 109 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTE
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCce
Confidence 344 88999999999999998753 58899999998643 3345678999999999999999999999976 457
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 110 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~ 183 (318)
T 3lxp_A 110 LQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKA 183 (318)
T ss_dssp EEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccc
Confidence 89999999999999999654 3889999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHH----HHhhccc
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN----IAYQSSM 850 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~----~~~~~~~ 850 (956)
...... .........+|..|+|||++.+..++.++|||||||++|||++|+.||........... .......
T Consensus 184 ~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 259 (318)
T 3lxp_A 184 VPEGHE----YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259 (318)
T ss_dssp CCTTCS----EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHH
T ss_pred cccccc----ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHH
Confidence 653221 11223345578889999999999999999999999999999999999864322110000 0000001
Q ss_pred chhhc-cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 851 MFSVI-DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 851 ~~~~~-~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
..+.+ .+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.+.+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 260 LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 11112 2233445677788999999999999999999999999999998776543
No 153
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-39 Score=361.75 Aligned_cols=264 Identities=31% Similarity=0.497 Sum_probs=202.2
Q ss_pred CCCCCCeeeeeCCeeEEEEEeC--C--CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccc-cCCcEEEE
Q 002174 625 NFNSSTQIGQGGYGKVYKGILP--D--GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLV 698 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~--~--~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~LV 698 (956)
.|++.+.||+|+||+||+|.+. + +..||||.++... ....+++.+|+.++++++||||+++++++. .++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4666789999999999999863 2 2468999987533 344578999999999999999999999864 45688999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 170 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 9999999999999754 345788999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
... .........+|+.|+|||++.+..++.++|||||||++|||++ |..||........ .. .+..+
T Consensus 246 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~-~~---------~~~~~ 312 (373)
T 3c1x_A 246 EFD---SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TV---------YLLQG 312 (373)
T ss_dssp ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCH-HH---------HHHTT
T ss_pred ccc---cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHH-HH---------HHHcC
Confidence 211 1112233457889999999999999999999999999999999 6666654322111 11 11222
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCC
Q 002174 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES 905 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~ 905 (956)
.....|..++..+.+++.+||+.+|++||++.++++.|+.+...+...
T Consensus 313 ~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~ 360 (373)
T 3c1x_A 313 RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE 360 (373)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence 333445667788999999999999999999999999999998766543
No 154
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.6e-39 Score=350.59 Aligned_cols=252 Identities=23% Similarity=0.390 Sum_probs=208.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CC-------cEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DG-------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
.++|++.+.||+|+||+||+|... ++ +.||+|++........+.+.+|++++++++||||+++++++.+++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 467888999999999999999864 23 5799999987666667789999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc--------EEE
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKV 766 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--------~kl 766 (956)
.++||||+++|+|.+++.... ..+++..++.++.|+++||+|||+++ |+||||||+||+++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 999999999999999997643 34889999999999999999999999 999999999999998887 999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
+|||++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..|+....+........
T Consensus 163 ~Dfg~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~ 231 (289)
T 4fvq_A 163 SDPGISITVLP-----------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY 231 (289)
T ss_dssp CCCCSCTTTSC-----------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred ccCcccccccC-----------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh
Confidence 99999875421 123458899999999987 778999999999999999999666655443333222211
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.. ....+...+..+.+++.+||+.+|.+||++.++++.|+++..
T Consensus 232 ~~-----------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 232 ED-----------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp HT-----------TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred hc-----------cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 11 112233345678899999999999999999999999998754
No 155
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=4.6e-39 Score=354.10 Aligned_cols=200 Identities=25% Similarity=0.431 Sum_probs=174.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|.+.+.||+|+||+||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 467889999999999999999975 7999999999865544556789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeeccccccCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~~ 778 (956)
+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 88 VSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred CCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999987643 4889999999999999999999999 9999999999999 78899999999998754311
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 211 (304)
T 2jam_A 163 ---------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET 211 (304)
T ss_dssp ---------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ---------ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence 1233468999999999999999999999999999999999999996543
No 156
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=361.67 Aligned_cols=270 Identities=15% Similarity=0.172 Sum_probs=209.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCC---------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceee---------
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVS--------- 684 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~--------- 684 (956)
.++|++.+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999753 789999998753 36788999999999999998
Q ss_pred ------eeccccc-CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEE
Q 002174 685 ------LVGYCDE-EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 757 (956)
Q Consensus 685 ------l~~~~~~-~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NIL 757 (956)
+++++.. .+..++||||+ +++|.+++.......+++..++.++.||+.||+|||+++ |+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence 4555544 67889999999 999999998764567999999999999999999999999 999999999999
Q ss_pred EcCCC--cEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 758 LDHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 758 l~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
++.++ .+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 9999999999876432211111111223457999999999999999999999999999999999999999754
Q ss_pred chhHHHHHHHhh--cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 836 KNIVREVNIAYQ--SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 836 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
............ ........... .....++..+.+++..|++.+|.+||++.++++.|+.+.....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKPGPFVGPC--GHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TTCHHHHHHHHHHHHHSCCCEECTT--SCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHhccCChhhhhhhc--cccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 311111111100 00000000000 0012345789999999999999999999999999999877654
No 157
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.3e-39 Score=372.53 Aligned_cols=260 Identities=23% Similarity=0.390 Sum_probs=194.9
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
...++|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 45689999999999999999999965 689999999875321 112357899999999999999999999854
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEEEe
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVAD 768 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~D 768 (956)
+..++||||+++|+|.+++... ..+++..++.++.|+++||+|||+++ |+||||||+|||++.++ .+||+|
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~D 285 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 285 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECC
T ss_pred -CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEee
Confidence 4689999999999999988654 45899999999999999999999999 99999999999997544 599999
Q ss_pred eccccccCCCCCCCccccceecccccCCCccccccccc---CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002174 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
||+|+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........
T Consensus 286 FG~a~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~--- 354 (419)
T 3i6u_A 286 FGHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLK--- 354 (419)
T ss_dssp SSTTTSCC-------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHH---
T ss_pred cccceecCCC--------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHH---
Confidence 9999875422 22234579999999999864 567889999999999999999999996432210000
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC
Q 002174 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ 925 (956)
..+......++.+. .+.....+.+|+.+||..||++||
T Consensus 355 -------~~i~~~~~~~~~~~-----------------------------------~~~~~~~~~~li~~~L~~dP~~Rp 392 (419)
T 3i6u_A 355 -------DQITSGKYNFIPEV-----------------------------------WAEVSEKALDLVKKLLVVDPKARF 392 (419)
T ss_dssp -------HHHHTTCCCCCHHH-----------------------------------HTTSCHHHHHHHHHHSCSSTTTSC
T ss_pred -------HHHhcCCCCCCchh-----------------------------------hcccCHHHHHHHHHHccCChhHCc
Confidence 00000000111100 011122334788889999999999
Q ss_pred CCcCCCCCCcccCC
Q 002174 926 SSSSMLKHPYVSSD 939 (956)
Q Consensus 926 sa~e~L~HP~f~~~ 939 (956)
|++|+|+||||+..
T Consensus 393 s~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 393 TTEEALRHPWLQDE 406 (419)
T ss_dssp CHHHHHHSGGGCCH
T ss_pred CHHHHhCCcccCCh
Confidence 99999999999753
No 158
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-38 Score=350.54 Aligned_cols=269 Identities=25% Similarity=0.403 Sum_probs=211.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-----CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC--Cc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~ 694 (956)
.++|++.+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 45688899999999999999983 368999999987543 23356889999999999999999999999776 67
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 175 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 175 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccc
Confidence 899999999999999996543 35899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHh----h-cc
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY----Q-SS 849 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~----~-~~ 849 (956)
...... .........||..|+|||++.+..++.++|||||||++|||++|+.|+.............. . ..
T Consensus 176 ~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 176 IETDKE----YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp CCTTCC----EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccCCCc----ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 653321 11223345688889999999999999999999999999999999998643211100000000 0 00
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
....+..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 252 LVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 01112223334456677889999999999999999999999999999764
No 159
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.4e-38 Score=344.07 Aligned_cols=254 Identities=31% Similarity=0.521 Sum_probs=206.3
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhh-------HHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG-------EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
.++|++.+.||+|+||+||+|.+. +++.||+|++....... .+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 467888999999999999999974 78999999986533221 167899999999999999999999997655
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc-----EEEEee
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-----AKVADF 769 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-----~kl~Df 769 (956)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 6999999999999988654 346899999999999999999999875 45999999999999988776 999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccc--cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
|+++.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...............
T Consensus 174 g~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~ 243 (287)
T 4f0f_A 174 GLSQQSVH----------SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR 243 (287)
T ss_dssp TTCBCCSS----------CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHH
T ss_pred Cccccccc----------cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHh
Confidence 99975321 223456899999999984 456788999999999999999999999754322211111100
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002174 848 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..+.....+..++..+.+++..||+.+|.+||++.++++.|++
T Consensus 244 -------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 244 -------EEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp -------HSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred -------ccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 1122234566778899999999999999999999999999875
No 160
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=2.2e-38 Score=346.03 Aligned_cols=262 Identities=27% Similarity=0.483 Sum_probs=201.5
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+..++|++.+.||+|+||+||+|.+.. .||||+++... ....+.+.+|++++++++||||+++++++. .+..++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEE
Confidence 345789999999999999999998643 59999987543 334568999999999999999999999664 5578999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 98 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 98 TQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999999999654 345899999999999999999999999 999999999999999999999999999765422
Q ss_pred CCCCccccceecccccCCCcccccccc---cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||............... . ..
T Consensus 174 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~----~~ 243 (289)
T 3og7_A 174 S-----GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR-G----SL 243 (289)
T ss_dssp ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHH-T----SC
T ss_pred c-----ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcc-c----cc
Confidence 1 112233456899999999987 567888999999999999999999999765443332222111 1 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
..........++..+.+++.+|++.+|.+||++.++++.|+++.
T Consensus 244 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11222334567788999999999999999999999999999764
No 161
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-38 Score=351.67 Aligned_cols=260 Identities=23% Similarity=0.341 Sum_probs=198.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCc----
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE---- 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 694 (956)
.++|++.+.||+|+||.||+|.. .+++.||||++..... .....+.+|++++++++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46899999999999999999996 5789999999976432 234578899999999999999999999865543
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++++|.++++... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 499999999999999997653 5889999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||............. .......
T Consensus 166 ~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~-~~~~~~~- 239 (311)
T 3ork_A 166 IADSGN----SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV-REDPIPP- 239 (311)
T ss_dssp --------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HCCCCCH-
T ss_pred cccccc----ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh-cCCCCCc-
Confidence 543221 1112234568999999999999999999999999999999999999997654332211111 1000000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHHh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM-RELESI 898 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~-~~L~~~ 898 (956)
......++..+.+++.+|++.+|.+||+..+++ ..+.+.
T Consensus 240 -----~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 240 -----SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp -----HHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred -----ccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 001223567889999999999999999776655 444444
No 162
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.1e-39 Score=368.35 Aligned_cols=198 Identities=22% Similarity=0.272 Sum_probs=172.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC--------CCceeeeecccc---
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--------HRNLVSLVGYCD--- 690 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l~~~~~--- 690 (956)
.++|++.++||+|+||+||+|+.. +++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 468999999999999999999864 6899999999753 334567889999999985 788999999986
Q ss_pred -cCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCC------
Q 002174 691 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKF------ 762 (956)
Q Consensus 691 -~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~------ 762 (956)
.....++||||+ +++|.+++.......+++..++.++.||++||+|||++ + |+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhh
Confidence 556899999999 67888877666556799999999999999999999998 8 99999999999999775
Q ss_pred -------------------------------------------cEEEEeeccccccCCCCCCCccccceecccccCCCcc
Q 002174 763 -------------------------------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYL 799 (956)
Q Consensus 763 -------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ 799 (956)
.+||+|||+++..... .....||+.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----------~~~~~gt~~y~ 260 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----------FTEDIQTRQYR 260 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----------SCSCCSCGGGC
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----------CccCCCCCccc
Confidence 7999999999865321 23346899999
Q ss_pred cccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 800 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 800 aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
|||++.+..++.++|||||||++|||++|+.||...
T Consensus 261 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 261 SLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp CHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 999999999999999999999999999999999753
No 163
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=382.20 Aligned_cols=260 Identities=27% Similarity=0.432 Sum_probs=209.5
Q ss_pred CCCCCC-eeeeeCCeeEEEEEeC---CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 625 NFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 625 ~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++.+.+ .||+|+||.||+|.++ ++..||||+++.... ...+++.+|++++++++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333344 7999999999999864 467899999986432 346789999999999999999999999976 5699999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ...+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 415 E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~ 490 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490 (613)
T ss_dssp ECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---
T ss_pred EeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCC
Confidence 999999999999654 446899999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.. ........+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+.
T Consensus 491 ~~----~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~~---------~i~~~~ 556 (613)
T 2ozo_A 491 SY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMA---------FIEQGK 556 (613)
T ss_dssp ---------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-HHH---------HHHTTC
T ss_pred ce----eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-HHH---------HHHcCC
Confidence 10 111123346689999999999999999999999999999998 999997654321 111 122233
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
....|..++..+.+++..||+.+|++||++.++++.|+.+.....
T Consensus 557 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~ 601 (613)
T 2ozo_A 557 RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 601 (613)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence 445677788999999999999999999999999999998876543
No 164
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=4.5e-39 Score=363.69 Aligned_cols=286 Identities=23% Similarity=0.337 Sum_probs=211.4
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC-----CcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 695 (956)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 468999999999999999999965 68899999987533 33346889999999999999999999998654 478
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||++ |+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999996 6999999653 4889999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
..... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. .
T Consensus 179 ~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~-------~- 246 (364)
T 3qyz_A 179 DPDHD----HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL-------G- 246 (364)
T ss_dssp CGGGC----BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH-------H-
T ss_pred CCCCC----ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH-------H-
Confidence 42211 0111234579999999998765 458999999999999999999999997654322211110 0
Q ss_pred ccCCCCCCChHHHHHHHHHH-HHhcccCCC-CCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCC
Q 002174 855 IDGNMGSYPSECVEKFIKLA-LKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~-~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
..+..+.+....+.... .......|. .+.... ...+..+....+|+.+||..||++|||++|+|+
T Consensus 247 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 247 ---ILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWN----------RLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp ---HHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHH----------HHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHH----------HhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01111222111110000 000011111 111111 122334455678999999999999999999999
Q ss_pred CCcccCCC
Q 002174 933 HPYVSSDV 940 (956)
Q Consensus 933 HP~f~~~~ 940 (956)
||||....
T Consensus 314 hp~~~~~~ 321 (364)
T 3qyz_A 314 HPYLEQYY 321 (364)
T ss_dssp SGGGTTTC
T ss_pred Ccchhhcc
Confidence 99998753
No 165
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.6e-38 Score=343.95 Aligned_cols=259 Identities=26% Similarity=0.445 Sum_probs=209.6
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCC----CcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
..++|++.+.||+|+||+||+|.+.+ +..||+|.+... .....+.+.+|++++++++||||+++++++.++ ..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 45688899999999999999998542 346999998764 334457899999999999999999999998754 568
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 9999999999999997643 45889999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||......... . .+.
T Consensus 165 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~-~---------~~~ 228 (281)
T 3cc6_A 165 DED------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI-G---------VLE 228 (281)
T ss_dssp --------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH-H---------HHH
T ss_pred ccc------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH-H---------HHh
Confidence 322 111233457789999999999999999999999999999998 99999754332111 1 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.+.....+..++..+.+++.+|+..+|.+||++.++++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 229 KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 1222334556678899999999999999999999999999987653
No 166
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=7.3e-39 Score=347.09 Aligned_cols=262 Identities=22% Similarity=0.326 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467899999999999999999975 68999999986433 3345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||.+.......
T Consensus 86 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 159 (276)
T 2yex_A 86 YCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN- 159 (276)
T ss_dssp CCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT-
T ss_pred ecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc-
Confidence 99999999998543 45889999999999999999999999 9999999999999999999999999997653221
Q ss_pred CCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.........|++.|+|||.+.+..+ +.++||||||+++|||++|+.||.............
T Consensus 160 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-------------- 221 (276)
T 2yex_A 160 ----RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW-------------- 221 (276)
T ss_dssp ----EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH--------------
T ss_pred ----chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh--------------
Confidence 1112234568999999999988765 778999999999999999999997543211111000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
.. .....+.. +..+....+++.+||..||++|||++|+++||||...
T Consensus 222 --------------~~-----~~~~~~~~--------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (276)
T 2yex_A 222 --------------KE-----KKTYLNPW--------------KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (276)
T ss_dssp --------------HT-----TCTTSTTG--------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred --------------hh-----cccccCch--------------hhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence 00 00000000 0011222367888899999999999999999999766
Q ss_pred CC
Q 002174 940 VS 941 (956)
Q Consensus 940 ~~ 941 (956)
..
T Consensus 269 ~~ 270 (276)
T 2yex_A 269 LK 270 (276)
T ss_dssp CC
T ss_pred hh
Confidence 54
No 167
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=4.5e-39 Score=357.78 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=206.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcE----EEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTV----VAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|++.+.||+|+||+||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 357888999999999999999964 4443 8888875432 222346778999999999999999999986 46789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++... ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 166 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166 (325)
T ss_dssp EEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred EEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccC
Confidence 999999999999999754 346889999999999999999999999 9999999999999999999999999998765
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........|+..|+|||++.+..++.++|||||||++|||++ |+.||......... . .+.
T Consensus 167 ~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~-~---------~~~ 231 (325)
T 3kex_A 167 PDDK-----QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP-D---------LLE 231 (325)
T ss_dssp CCTT-----CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH-H---------HHH
T ss_pred cccc-----cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH-H---------HHH
Confidence 4321 122344567889999999999999999999999999999999 99999754322111 1 011
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+.....+..++..+.+++.+||..+|.+||++.++++.|+.+..
T Consensus 232 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 232 KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 122233455566778899999999999999999999999998743
No 168
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2e-38 Score=360.73 Aligned_cols=202 Identities=24% Similarity=0.301 Sum_probs=173.6
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CC-----ceeeeecccccCC
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEG 693 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~ 693 (956)
...++|++.+.||+|+||+||+|... +++.||||+++.. .....++..|+++++.++ |+ +|+++++++...+
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 34678999999999999999999965 6899999999753 333457788998888885 44 4999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh--cCCCCEeccCCCcccEEEc--CCCcEEEEee
Q 002174 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT--EADPPVFHRDIKASNILLD--HKFTAKVADF 769 (956)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~--~~~~~ivH~Dlk~~NILl~--~~~~~kl~Df 769 (956)
..++||||++ |+|.+++.......+++..++.++.|++.||.|||. .+ |+||||||+|||++ .++.+||+||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~---ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELS---IIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTC---EECCCCSGGGEEESSTTSCCEEECCC
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCC---EEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999995 699999987765679999999999999999999995 45 99999999999994 5788999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~ 837 (956)
|+|+..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 206 G~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~ 263 (382)
T 2vx3_A 206 GSSCQLGQR----------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263 (382)
T ss_dssp TTCEETTCC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cCceecccc----------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 999875321 2335689999999999999999999999999999999999999976544
No 169
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=2.5e-38 Score=353.48 Aligned_cols=289 Identities=21% Similarity=0.309 Sum_probs=210.4
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-C-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc------eeeeecccccCCc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-P-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 694 (956)
.++|++.+.||+|+||+||+|.. . +++.||||+++.. ....+.+.+|+++++.++|++ ++++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 3 6899999999753 334567889999999987664 9999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC--------------
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 760 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-------------- 760 (956)
.++||||+ +++|.+++......++++..++.++.|+++||+|||+++ |+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 899999998876667899999999999999999999999 999999999999987
Q ss_pred -----CCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 761 -----KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 761 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 237 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH----------HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTH 237 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC----------CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccCCCceEeeCcccccCccc----------cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 668999999999864321 23346899999999999999999999999999999999999999765
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh----hCC---CCCCC
Q 002174 836 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN----MMP---ESDTK 908 (956)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~----~~~---~~~~~ 908 (956)
.......... .. .+..|......... ......+....+......+....... ... ...+.
T Consensus 238 ~~~~~~~~~~-------~~----~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 238 DSKEHLAMME-------RI----LGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp CHHHHHHHHH-------HH----HCSCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred ChHHHHHHHH-------HH----hCCCCHHHHhhccc--hhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 4322111100 00 11122221111000 00000000000111111111111000 000 00122
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
..+++.+||..||++|||++|+++||||..-
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 335 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALKHPFFDLL 335 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred HHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence 3479999999999999999999999999753
No 170
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.4e-38 Score=359.41 Aligned_cols=263 Identities=24% Similarity=0.423 Sum_probs=207.6
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHHhc-CCCceeee
Q 002174 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRL-HHRNLVSL 685 (956)
Q Consensus 616 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~nIv~l 685 (956)
+.......++|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3344555678999999999999999999975 799999999865331 1135678999999999 79999999
Q ss_pred ecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEE
Q 002174 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (956)
Q Consensus 686 ~~~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 765 (956)
++++...+..++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 166 IDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEE
T ss_pred EEEEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEE
Confidence 99999999999999999999999999764 35889999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCccccccccc------CCCCCcccEeehHHHHHHHHhCCCCCCCCchhH
Q 002174 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 839 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~ 839 (956)
|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 241 l~DfG~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~ 312 (365)
T 2y7j_A 241 LSDFGFSCHLEPGE--------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL 312 (365)
T ss_dssp ECCCTTCEECCTTC--------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEecCcccccCCCc--------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 99999998764321 1234569999999999864 358889999999999999999999997543211
Q ss_pred HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCC
Q 002174 840 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTS 919 (956)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~ 919 (956)
. ... +..+.. .++. .. .+.......+++.+||..
T Consensus 313 ~-~~~---------i~~~~~-~~~~------------------------~~-----------~~~~~~~~~~li~~~L~~ 346 (365)
T 2y7j_A 313 M-LRM---------IMEGQY-QFSS------------------------PE-----------WDDRSSTVKDLISRLLQV 346 (365)
T ss_dssp H-HHH---------HHHTCC-CCCH------------------------HH-----------HSSSCHHHHHHHHHHSCS
T ss_pred H-HHH---------HHhCCC-CCCC------------------------cc-----------cccCCHHHHHHHHHHcCC
Confidence 1 000 000000 0000 00 011122234688889999
Q ss_pred CCCCCCCCcCCCCCCccc
Q 002174 920 KEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 920 dP~~R~sa~e~L~HP~f~ 937 (956)
||++|||++|+|+||||.
T Consensus 347 dP~~Rps~~ell~hp~f~ 364 (365)
T 2y7j_A 347 DPEARLTAEQALQHPFFE 364 (365)
T ss_dssp STTTSCCHHHHHHSGGGC
T ss_pred ChhHCcCHHHHhcCcccC
Confidence 999999999999999996
No 171
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-38 Score=344.81 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=214.0
Q ss_pred hcCCCCCC-eeeeeCCeeEEEEEeC---CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002174 623 TNNFNSST-QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~-~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|.+.+ .||+|+||.||+|.+. +++.||||+++... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 35566666 8999999999999854 57889999998643 33457899999999999999999999999 4567999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++... ...+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999653 345899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.... ........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..
T Consensus 163 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~---------~i~~ 228 (287)
T 1u59_A 163 DDSY----YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-VMA---------FIEQ 228 (287)
T ss_dssp CSCE----ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-HHH---------HHHT
T ss_pred Ccce----eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-HHH---------HHhc
Confidence 2210 111223456889999999998899999999999999999998 999997544321 111 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
+.....+..++..+.+++..||..+|.+||++.++++.|+.+...
T Consensus 229 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 229 GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 223445667788999999999999999999999999999988664
No 172
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=6.2e-39 Score=389.19 Aligned_cols=203 Identities=22% Similarity=0.345 Sum_probs=177.3
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~ 696 (956)
..++|++.+.||+|+||+||+|... +++.||||+++... ....+.+..|.+++..+ +|++|+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4568999999999999999999965 68899999987532 12235678899999987 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.++++... .+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+...
T Consensus 419 lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 9999999999999998653 4899999999999999999999999 9999999999999999999999999998643
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 494 ~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 494 WDG-------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CTT-------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCC-------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 221 22345679999999999999999999999999999999999999997543
No 173
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-38 Score=347.80 Aligned_cols=262 Identities=26% Similarity=0.385 Sum_probs=211.8
Q ss_pred HHhcCCCCCC-eeeeeCCeeEEEEEe---CCCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002174 621 LATNNFNSST-QIGQGGYGKVYKGIL---PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 621 ~~~~~~~~~~-~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
...++|.+.+ .||+|+||+||+|.+ .+++.||||+++.... ...+++.+|+++++.++||||+++++++ ..+.
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3456788887 999999999999964 2478999999875432 2256899999999999999999999999 5678
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 166 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKA 166 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred cEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCccee
Confidence 89999999999999999764 34889999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchh
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
....... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||........ .. .
T Consensus 167 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~---------~ 232 (291)
T 1xbb_A 167 LRADENY----YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TA---------M 232 (291)
T ss_dssp CCTTCSE----EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH-HH---------H
T ss_pred eccCCCc----ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-HH---------H
Confidence 6433210 111223346788999999999889999999999999999999 9999976543211 11 1
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
+..+.....+..++..+.+++..||+.+|.+||++.++++.|++++...
T Consensus 233 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 233 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 1122234456677889999999999999999999999999999887643
No 174
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-38 Score=346.22 Aligned_cols=254 Identities=30% Similarity=0.455 Sum_probs=205.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc-CCcEEEEEe
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 700 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~LV~E 700 (956)
..++|++.+.||+|+||+||+|.. .|+.||||+++... ..+.+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred ChhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356889999999999999999987 48899999987543 34678999999999999999999998654 457899999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++.......+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997654444788899999999999999999999 999999999999999999999999998754321
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ... .+..+..
T Consensus 171 --------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~---------~~~~~~~ 232 (278)
T 1byg_A 171 --------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD-VVP---------RVEKGYK 232 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG-HHH---------HHTTTCC
T ss_pred --------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HHhcCCC
Confidence 122357889999999999999999999999999999998 999997543211 111 1112223
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
...+..++..+.+++..||+.+|.+||++.++++.|+.+...
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 344566778899999999999999999999999999988653
No 175
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.9e-38 Score=345.25 Aligned_cols=255 Identities=26% Similarity=0.431 Sum_probs=198.7
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeeccccc----CCcEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQM 696 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~~ 696 (956)
..|.+.+.||+|+||+||+|... ++..||+|.+... .....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677788999999999999965 6889999998753 23345678999999999999999999998754 45689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEEEEeecccccc
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLA 775 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DfGla~~~ 775 (956)
+||||+++|+|.+++... ..+++..++.++.|++.||.|||+.+ ++|+||||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999999764 34888999999999999999999875 4599999999999998 7899999999999754
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... ......||+.|+|||++. +.++.++|||||||++|||++|+.||..............
T Consensus 183 ~~~---------~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~--------- 243 (290)
T 1t4h_A 183 RAS---------FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT--------- 243 (290)
T ss_dssp CTT---------SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHT---------
T ss_pred ccc---------ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHh---------
Confidence 321 123456899999999886 4589999999999999999999999976444332221110
Q ss_pred cCCCC-CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCC
Q 002174 856 DGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 856 ~~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
.+... ..+. ...+...+++.+||..||++|||++|+++||
T Consensus 244 ~~~~~~~~~~---------------------------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~h~ 284 (290)
T 1t4h_A 244 SGVKPASFDK---------------------------------------VAIPEVKEIIEGCIRQNKDERYSIKDLLNHA 284 (290)
T ss_dssp TTCCCGGGGG---------------------------------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred ccCCccccCC---------------------------------------CCCHHHHHHHHHHccCChhhCCCHHHHhhCc
Confidence 00000 0000 0011123677888999999999999999999
Q ss_pred cccCC
Q 002174 935 YVSSD 939 (956)
Q Consensus 935 ~f~~~ 939 (956)
||+++
T Consensus 285 ~f~~~ 289 (290)
T 1t4h_A 285 FFQEE 289 (290)
T ss_dssp GGC--
T ss_pred ccccC
Confidence 99875
No 176
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.7e-38 Score=353.84 Aligned_cols=207 Identities=25% Similarity=0.407 Sum_probs=169.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCC-------
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------- 693 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------- 693 (956)
.++|++.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467889999999999999999976 799999999875433 34578999999999999999999999875432
Q ss_pred --------------------------------------------------cEEEEEecCCCCCHHHHHhhcCC-CCchhH
Q 002174 694 --------------------------------------------------EQMLVYEFMSNGTLRDQLSAKSK-EPLGFA 722 (956)
Q Consensus 694 --------------------------------------------------~~~LV~E~~~~gsL~~~l~~~~~-~~l~~~ 722 (956)
..++||||+++|+|.+++..... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 37999999999999999976533 234566
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc-----ccceecccccCCC
Q 002174 723 MRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV-----PAHVSTVVKGTPG 797 (956)
Q Consensus 723 ~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~-----~~~~~~~~~gt~~ 797 (956)
.++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++........... .........||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999999 999999999999999999999999999876543211000 0112234569999
Q ss_pred cccccccccCCCCCcccEeehHHHHHHHHhCCCCC
Q 002174 798 YLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 832 (956)
Q Consensus 798 y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf 832 (956)
|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~ 276 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ 276 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence 99999999999999999999999999999986654
No 177
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=367.31 Aligned_cols=330 Identities=22% Similarity=0.221 Sum_probs=292.8
Q ss_pred CCCC--CCCceeecCCCCC----CCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchh
Q 002174 62 PCTS--NWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELL 135 (956)
Q Consensus 62 ~c~~--~w~gv~C~~~~~~----~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 135 (956)
.|.| .|..|.|...... +...+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|
T Consensus 6 ~C~C~~~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L 85 (477)
T 2id5_A 6 RCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTL 85 (477)
T ss_dssp TCEEETTTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCeECCCCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEE
Confidence 4544 4788999765422 335689999999999999989999999999999999999998889999999999999
Q ss_pred hccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccccccc
Q 002174 136 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (956)
Q Consensus 136 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (956)
+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|+++
T Consensus 86 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 86 GLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp ECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred ECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 99999999777778999999999999999999888999999999999999999999888999999999999999999999
Q ss_pred CCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCC-CCCCCCCCccEEEccCCcCCCCCCCC-
Q 002174 216 GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM-PDLSRIPNLGYLDLSSNQLNGSIPPG- 293 (956)
Q Consensus 216 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~- 293 (956)
+..+..|..+++|+.|+|++|.+.+ ..+..|.++++|+.|++++|.+.+.. +......+|+.|+|++|+++ .+|..
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~-~~~~~~ 243 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINA-IRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLT-AVPYLA 243 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCE-ECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCC-SCCHHH
T ss_pred ccChhHhcccCCCcEEeCCCCcCcE-eChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCccc-ccCHHH
Confidence 8887889999999999999999986 56678999999999999999876644 44556669999999999999 55532
Q ss_pred C-CccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--C
Q 002174 294 R-LSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--N 370 (956)
Q Consensus 294 ~-~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~ 370 (956)
+ ...+|+.|+|++|.+++..+..|.++++|+.|+|++|++++..|..|..+.. |+.|+|++|+|+.++... .
T Consensus 244 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~-----L~~L~L~~N~l~~~~~~~~~~ 318 (477)
T 2id5_A 244 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY-----LRVLNVSGNQLTTLEESVFHS 318 (477)
T ss_dssp HTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT-----CCEEECCSSCCSCCCGGGBSC
T ss_pred hcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc-----CCEEECCCCcCceeCHhHcCC
Confidence 2 2348999999999999998999999999999999999999988988876544 569999999999998764 5
Q ss_pred CCCCcEEEecCCcccccCCcccccCCCC
Q 002174 371 IPPNVTVRLRGNPFCLNTNAEQFCGSHS 398 (956)
Q Consensus 371 ~~~l~~l~l~~Np~~c~c~~~~~~~~~~ 398 (956)
++.+..|++++|||.|||.+.|+..|..
T Consensus 319 l~~L~~L~l~~N~l~c~c~~~~~~~~~~ 346 (477)
T 2id5_A 319 VGNLETLILDSNPLACDCRLLWVFRRRW 346 (477)
T ss_dssp GGGCCEEECCSSCEECSGGGHHHHTTTT
T ss_pred CcccCEEEccCCCccCccchHhHHhhhh
Confidence 8899999999999999999999877653
No 178
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=343.24 Aligned_cols=264 Identities=26% Similarity=0.381 Sum_probs=212.2
Q ss_pred CCCCCCeeeeeCCeeEEEEEeC-C---CcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcE-EEE
Q 002174 625 NFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ-MLV 698 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~-~LV 698 (956)
.|...++||+|+||+||+|.+. + +..||+|.+..... ...+.+.+|++++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999853 2 33799999875433 3457889999999999999999999999766655 999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+.+|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 102 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 9999999999999763 346889999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
... .........+++.|+|||.+.+..++.++|||||||++|||++|..|+....+....... +....
T Consensus 178 ~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~---------~~~~~ 245 (298)
T 3pls_A 178 EYY---SVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF---------LAQGR 245 (298)
T ss_dssp GGG---CSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHH---------HHTTC
T ss_pred ccc---ccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHH---------hhcCC
Confidence 211 112223456788999999999999999999999999999999977766544332221111 11122
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
....+..++..+.+++..|++.+|.+||++.++++.|+++...+..
T Consensus 246 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 246 RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 2334556678899999999999999999999999999998876543
No 179
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=9.6e-39 Score=364.51 Aligned_cols=281 Identities=22% Similarity=0.313 Sum_probs=202.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC------cEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------EQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------~~~ 696 (956)
..+|++.+.||+|+||+||+|+..++..||+|++..... ...+|+++++.++||||+++++++...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 357889999999999999999987767799988764332 1236999999999999999999985433 378
Q ss_pred EEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEEEEeecccc
Q 002174 697 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSR 773 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DfGla~ 773 (956)
+||||+++ ++.+.+.. .....+++..++.++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||+|+
T Consensus 115 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 99999976 44443332 23456899999999999999999999999 99999999999999 79999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
...... ......||+.|+|||++.+. .++.++||||+||++|||++|+.||..............
T Consensus 191 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~------ 256 (394)
T 4e7w_A 191 ILIAGE--------PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIK------ 256 (394)
T ss_dssp ECCTTC--------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH------
T ss_pred cccCCC--------CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH------
Confidence 764322 12345689999999999765 589999999999999999999999976544322221110
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC-CCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-PESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~-~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
. .+..+.+....... ...-..-|..++..- ...+ +...+.+.+|+.+||..||++|+|++|+|
T Consensus 257 -~----~g~p~~~~~~~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 320 (394)
T 4e7w_A 257 -V----LGTPSREQIKTMNP--NYMEHKFPQIRPHPF---------SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEAL 320 (394)
T ss_dssp -H----HCCCCHHHHHHHCG--GGSSSCCCCCCCCCH---------HHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHH
T ss_pred -H----hCCCCHHHHHhhCh--hhhhhccccccCCcH---------HHhccccCCHHHHHHHHHHhCCChhhCCCHHHHh
Confidence 0 01111111111100 000011122222110 0111 22344567899999999999999999999
Q ss_pred CCCcccCCCC
Q 002174 932 KHPYVSSDVS 941 (956)
Q Consensus 932 ~HP~f~~~~~ 941 (956)
+||||.+-..
T Consensus 321 ~hp~f~~~~~ 330 (394)
T 4e7w_A 321 CHPFFDELRT 330 (394)
T ss_dssp TSGGGSTTTS
T ss_pred cChhhhhhcc
Confidence 9999976443
No 180
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.5e-38 Score=346.06 Aligned_cols=251 Identities=27% Similarity=0.412 Sum_probs=208.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc---------
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------- 691 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------- 691 (956)
..++|++.+.||+|+||.||+|... +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 4567999999999999999999976 79999999987643 256789999999999999999998753
Q ss_pred -------CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002174 692 -------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 692 -------~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
....++||||+++|+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEE
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCE
Confidence 445899999999999999998765567899999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002174 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 844 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~ 844 (956)
||+|||++....... ......||+.|+|||++.+..++.++||||||+++|||++|..|+........
T Consensus 162 kl~Dfg~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~---- 229 (284)
T 2a19_B 162 KIGDFGLVTSLKNDG--------KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT---- 229 (284)
T ss_dssp EECCCTTCEESSCCS--------CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH----
T ss_pred EECcchhheeccccc--------cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH----
Confidence 999999998764321 12334689999999999999999999999999999999999988742211111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 845 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
.+.. ...+..++..+.+++.+|++.+|.+||++.++++.++.+.+..
T Consensus 230 --------~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 230 --------DLRD---GIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp --------HHHT---TCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred --------Hhhc---ccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 0111 1123344567889999999999999999999999999876543
No 181
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.8e-39 Score=368.30 Aligned_cols=277 Identities=22% Similarity=0.306 Sum_probs=198.5
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccC------CcEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GEQM 696 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~~~ 696 (956)
.+|++.+.||+|+||.||+|++. +|+.||||++..... ...+|++++++++||||+++++++... ...+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 46888999999999999999975 699999999865322 234699999999999999999988432 2367
Q ss_pred EEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeecccc
Q 002174 697 LVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSR 773 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla~ 773 (956)
+||||+++ +|.+.+.. .....+++..++.++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999964 77776643 23456899999999999999999999999 9999999999999965 678999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||............. .
T Consensus 206 ~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~-~----- 271 (420)
T 1j1b_A 206 QLVRGE--------PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII-K----- 271 (420)
T ss_dssp ECCTTC--------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-H-----
T ss_pred hcccCC--------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-H-----
Confidence 754221 12345689999999999764 78999999999999999999999997654332211111 0
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC-CCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-PESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~-~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
. .+....+....+ .-......-|.... ..+...+ +...+.+.+||.+||..||++|+|++|+|
T Consensus 272 -~----lg~p~~~~~~~~------~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l 335 (420)
T 1j1b_A 272 -V----LGTPTREQIREM------NPNYTEFKFPQIKA-----HPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335 (420)
T ss_dssp -H----HCSCCHHHHHHH------CSCCCCCCCCCCCC-----CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred -H----hCCCCHHHHHhh------ChhhhhhccCccCC-----CCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHh
Confidence 0 011111111110 00000000010000 0000011 22234556899999999999999999999
Q ss_pred CCCcccC
Q 002174 932 KHPYVSS 938 (956)
Q Consensus 932 ~HP~f~~ 938 (956)
+||||..
T Consensus 336 ~hp~f~~ 342 (420)
T 1j1b_A 336 AHSFFDE 342 (420)
T ss_dssp TSGGGGG
T ss_pred CCHhhcc
Confidence 9999964
No 182
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=363.46 Aligned_cols=201 Identities=27% Similarity=0.346 Sum_probs=171.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe----CCCcEEEEEEecCCC----hhhHHHHHHHHHHHHhc-CCCceeeeecccccCC
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 693 (956)
.++|++.+.||+|+||+||+|.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36799999999999999999997 368999999987432 12234677899999999 6999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+++|+|.+++.... .+++..++.++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999997653 4889999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc--CCCCCcccEeehHHHHHHHHhCCCCCCC
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
...... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 208 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~ 264 (355)
T 1vzo_A 208 EFVADE------TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV 264 (355)
T ss_dssp ECCGGG------GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred ecccCC------CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCcc
Confidence 653211 122234569999999999986 3578899999999999999999999964
No 183
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-38 Score=352.98 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=198.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCC--CceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++| +||+++++++..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 46788999999999999999998889999999987533 3334688999999999976 9999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||+ .+++|.+++... ..+++..+..++.|+++||+|||+.+ |+||||||+|||++ ++.+||+|||+++.....
T Consensus 88 ~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 588999999764 35889999999999999999999999 99999999999997 578999999999876432
Q ss_pred CCCCccccceecccccCCCccccccccc-----------CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
. .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+.......
T Consensus 161 ~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~--- 232 (343)
T 3dbq_A 161 T-----TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA--- 232 (343)
T ss_dssp --------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH---
T ss_pred c-----ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH---
Confidence 2 1112334579999999999865 67888999999999999999999999764433222221
Q ss_pred cccchhhccCC-CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 848 SSMMFSVIDGN-MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 848 ~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.++.. ...++...+..+.+++..||+.+|.+||++.++++.
T Consensus 233 ------~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 233 ------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------HhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 11111 223344455678888999999999999999888764
No 184
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-38 Score=361.16 Aligned_cols=278 Identities=23% Similarity=0.365 Sum_probs=206.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE----
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ---- 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~---- 695 (956)
.++|.+.+.||+|+||+||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 468889999999999999999965 68999999987532 23356888999999999999999999999776654
Q ss_pred --EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 696 --MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 696 --~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999996 789888732 3889999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||............. .
T Consensus 193 ~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~-~----- 256 (371)
T 4exu_A 193 HADA----------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL-K----- 256 (371)
T ss_dssp -----------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-H-----
T ss_pred cccc----------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-H-----
Confidence 6432 1234568999999999987 788999999999999999999999997654332211111 0
Q ss_pred hhccCCCCCCChHHHHHHHH-HHHHhc-ccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCC
Q 002174 853 SVIDGNMGSYPSECVEKFIK-LALKCC-QDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 930 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~-l~~~c~-~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~ 930 (956)
. .+..+.+....+.. ...... ......+....+ ..+...+...+|+.+||+.||++|||++|+
T Consensus 257 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 321 (371)
T 4exu_A 257 -V----TGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQ----------LFPRASPQAADLLEKMLELDVDKRLTAAQA 321 (371)
T ss_dssp -H----HCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHH----------HSTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred -H----hCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHH----------hccccChHHHHHHHHHCCCChhhcCCHHHH
Confidence 0 01111111110000 000000 111111222221 223445556789999999999999999999
Q ss_pred CCCCcccCC
Q 002174 931 LKHPYVSSD 939 (956)
Q Consensus 931 L~HP~f~~~ 939 (956)
|+||||+.-
T Consensus 322 l~hp~f~~~ 330 (371)
T 4exu_A 322 LTHPFFEPF 330 (371)
T ss_dssp HTSGGGTTT
T ss_pred hcCcccccC
Confidence 999999753
No 185
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.7e-38 Score=374.58 Aligned_cols=259 Identities=25% Similarity=0.354 Sum_probs=204.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-------------hhHHHHHHHHHHHHhcCCCceeeeec
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNLVSLVG 687 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nIv~l~~ 687 (956)
..++|++.++||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3578999999999999999999975 589999999875332 22467889999999999999999999
Q ss_pred ccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cE
Q 002174 688 YCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TA 764 (956)
Q Consensus 688 ~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~ 764 (956)
++.+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999987643 4899999999999999999999999 99999999999998776 69
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002174 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 844 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~ 844 (956)
||+|||+++...... ......||+.|+|||++. +.++.++||||+||++|||++|+.||...... +....
T Consensus 189 kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~ 258 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDY--------KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKK 258 (504)
T ss_dssp EECCCTTCEECCTTS--------CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHH
T ss_pred EEEECCCCEEcCCCC--------ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH
Confidence 999999998764321 223456999999999987 46899999999999999999999999754321 11110
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCC
Q 002174 845 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 924 (956)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R 924 (956)
. ..+. ..++... ++.....+.+|+.+||+.||++|
T Consensus 259 i---------~~~~-~~~~~~~-----------------------------------~~~~s~~~~~li~~~L~~dp~~R 293 (504)
T 3q5i_A 259 V---------EKGK-YYFDFND-----------------------------------WKNISDEAKELIKLMLTYDYNKR 293 (504)
T ss_dssp H---------HHCC-CCCCHHH-----------------------------------HTTSCHHHHHHHHHHTCSSTTTS
T ss_pred H---------HcCC-CCCCccc-----------------------------------cCCCCHHHHHHHHHHcCCChhHC
Confidence 0 0000 0011000 01122334578999999999999
Q ss_pred CCCcCCCCCCcccCCC
Q 002174 925 PSSSSMLKHPYVSSDV 940 (956)
Q Consensus 925 ~sa~e~L~HP~f~~~~ 940 (956)
||++|+|+||||....
T Consensus 294 ~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 294 CTAEEALNSRWIKKYA 309 (504)
T ss_dssp CCHHHHHTSHHHHHTC
T ss_pred CCHHHHhcCHhhhhch
Confidence 9999999999997544
No 186
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=351.07 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCc----EEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|++.+.||+|+||+||+|.+. +++ .||+|.+... .....+.+.+|++++++++||||+++++++... ..+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-Cce
Confidence 467889999999999999999964 444 3577877543 334467899999999999999999999999865 488
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 9999999999999997643 45889999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||........ .. .+.
T Consensus 169 ~~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~-~~---------~~~ 233 (327)
T 3lzb_A 169 AEEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SS---------ILE 233 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-HH---------HHH
T ss_pred Cccc-----cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-HH---------HHH
Confidence 3221 112233456788999999999999999999999999999999 9999975432211 11 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+..
T Consensus 234 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 234 KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 222334466677889999999999999999999999999998754
No 187
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-38 Score=374.71 Aligned_cols=256 Identities=25% Similarity=0.401 Sum_probs=198.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++.+.||+|+||+||+|... +++.||+|++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457999999999999999999975 68999999987543 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC---CcEEEEeeccccccC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAP 776 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~DfGla~~~~ 776 (956)
||+++|+|.+++.... .+++..+..++.||++||+|||+.+ |+||||||+|||++.. +.+||+|||+++...
T Consensus 116 e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~ 190 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190 (494)
T ss_dssp ECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence 9999999999887653 4889999999999999999999999 9999999999999764 559999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. .......||+.|+|||++. ..++.++||||+||++|||++|+.||...... +..... ..
T Consensus 191 ~~--------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i---------~~ 251 (494)
T 3lij_A 191 NQ--------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKV---------EK 251 (494)
T ss_dssp TT--------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHH---------HH
T ss_pred CC--------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH---------Hh
Confidence 32 1223456999999999986 56899999999999999999999999754321 111100 00
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCcc
Q 002174 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
+.. ... .|. ++.....+.+|+.+||..||++|||++|+|+||||
T Consensus 252 ~~~-------------------~~~---~~~--------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~ 295 (494)
T 3lij_A 252 GKY-------------------TFD---SPE--------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295 (494)
T ss_dssp TCC-------------------CCC---SGG--------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred CCC-------------------CCC---chh--------------cccCCHHHHHHHHHHCCCChhhCccHHHHhcCccc
Confidence 000 000 000 01112223478888899999999999999999998
Q ss_pred cC
Q 002174 937 SS 938 (956)
Q Consensus 937 ~~ 938 (956)
..
T Consensus 296 ~~ 297 (494)
T 3lij_A 296 KE 297 (494)
T ss_dssp HH
T ss_pred cc
Confidence 65
No 188
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.4e-38 Score=347.90 Aligned_cols=259 Identities=25% Similarity=0.405 Sum_probs=200.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~ 701 (956)
.++|++.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 468999999999999999999976 5899999999876655667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002174 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.... ..+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 98 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~---- 169 (302)
T 2j7t_A 98 CPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK---- 169 (302)
T ss_dssp CTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHH----
T ss_pred CCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCccccc----
Confidence 99999999987532 35899999999999999999999999 99999999999999999999999999754211
Q ss_pred CccccceecccccCCCcccccccc-----cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.........||+.|+|||++. +..++.++||||||+++|||++|+.||............ ..
T Consensus 170 ---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~----------~~ 236 (302)
T 2j7t_A 170 ---TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI----------AK 236 (302)
T ss_dssp ---HHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH----------HH
T ss_pred ---cccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHH----------hc
Confidence 011123346899999999984 567889999999999999999999999754322111100 00
Q ss_pred CCCC--CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCC
Q 002174 857 GNMG--SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 857 ~~~~--~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
.... ..+..+ .....+++.+||..||++|||++|+++||
T Consensus 237 ~~~~~~~~~~~~---------------------------------------~~~l~~li~~~l~~dp~~Rps~~~ll~h~ 277 (302)
T 2j7t_A 237 SDPPTLLTPSKW---------------------------------------SVEFRDFLKIALDKNPETRPSAAQLLEHP 277 (302)
T ss_dssp SCCCCCSSGGGS---------------------------------------CHHHHHHHHHHSCSCTTTSCCHHHHTTST
T ss_pred cCCcccCCcccc---------------------------------------CHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 0000 001111 11123577788888999999999999999
Q ss_pred cccCCCC
Q 002174 935 YVSSDVS 941 (956)
Q Consensus 935 ~f~~~~~ 941 (956)
||.+...
T Consensus 278 ~~~~~~~ 284 (302)
T 2j7t_A 278 FVSSITS 284 (302)
T ss_dssp TTTTCCC
T ss_pred HHhhhcc
Confidence 9986543
No 189
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=7.2e-40 Score=371.93 Aligned_cols=197 Identities=17% Similarity=0.185 Sum_probs=163.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCC---ChhhHHHHHHHH---HHHHhcCCCceeeeec-------c
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEI---QFLSRLHHRNLVSLVG-------Y 688 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~nIv~l~~-------~ 688 (956)
.++|++.+.||+|+||+||+|.. .+|+.||||++... .....+.+.+|+ +.+++++||||+++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999996 46999999998742 333457889999 4555668999999984 4
Q ss_pred cccCC-----------------cEEEEEecCCCCCHHHHHhhcC-----CCCchhHHHHHHHHHHHHHHHHhhhcCCCCE
Q 002174 689 CDEEG-----------------EQMLVYEFMSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPV 746 (956)
Q Consensus 689 ~~~~~-----------------~~~LV~E~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 746 (956)
+...+ ..++||||+ +|+|.+++.... ...+++..++.|+.||++||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 43332 378999999 689999997532 124556888999999999999999999 9
Q ss_pred eccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-----------CCCCcccE
Q 002174 747 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----------KLTDKSDV 815 (956)
Q Consensus 747 vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~sDV 815 (956)
+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv 296 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA 296 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC----------CcccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence 999999999999999999999999998532 12334557 999999999887 89999999
Q ss_pred eehHHHHHHHHhCCCCCCC
Q 002174 816 YSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 816 wSlG~ll~elltg~~pf~~ 834 (956)
|||||++|||++|+.||..
T Consensus 297 wSlG~il~elltg~~Pf~~ 315 (377)
T 3byv_A 297 WALGLVIYWIWCADLPITK 315 (377)
T ss_dssp HHHHHHHHHHHHSSCCC--
T ss_pred HHHHHHHHHHHHCCCCCcc
Confidence 9999999999999999964
No 190
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.1e-38 Score=352.29 Aligned_cols=214 Identities=27% Similarity=0.360 Sum_probs=176.1
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
++....++|++.+.||+|+||+||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 45667889999999999999999999974 6889999998643 22334688999999999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhc--------------------------------------CCCCchhHHHHHHHHHHHH
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAK--------------------------------------SKEPLGFAMRLSIALGSSR 733 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~~ia~ 733 (956)
.+..++||||+++|+|.+++... ....+++..++.++.|+++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998521 1223577888999999999
Q ss_pred HHHHhhhcCCCCEeccCCCcccEEEcCCC--cEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc--CCC
Q 002174 734 GILYLHTEADPPVFHRDIKASNILLDHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKL 809 (956)
Q Consensus 734 gL~yLH~~~~~~ivH~Dlk~~NILl~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~ 809 (956)
||+|||+.+ |+||||||+||+++.++ .+||+|||+++........ .........||+.|+|||++.+ ..+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~ 253 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG---EYYGMTTKAGTPYFVAPEVLNTTNESY 253 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-----------CCCGGGCCHHHHTCSSSCC
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCcc---ccccccccCCCccccCchhhccCCCCC
Confidence 999999999 99999999999998776 8999999999865432211 1112344569999999999975 678
Q ss_pred CCcccEeehHHHHHHHHhCCCCCCCCch
Q 002174 810 TDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 810 ~~~sDVwSlG~ll~elltg~~pf~~~~~ 837 (956)
+.++|||||||++|||++|+.||.....
T Consensus 254 ~~~~DiwslG~il~el~~g~~pf~~~~~ 281 (345)
T 3hko_A 254 GPKCDAWSAGVLLHLLLMGAVPFPGVND 281 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCCCh
Confidence 9999999999999999999999975443
No 191
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=347.62 Aligned_cols=264 Identities=26% Similarity=0.368 Sum_probs=205.3
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc--CCCceeeeecccccC---
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL--HHRNLVSLVGYCDEE--- 692 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~nIv~l~~~~~~~--- 692 (956)
......++|++.+.||+|+||.||+|+.. ++.||||++... ....+..|.+++... +||||+++++++...
T Consensus 31 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~ 106 (337)
T 3mdy_A 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGS 106 (337)
T ss_dssp HHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGG
T ss_pred cccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCC
Confidence 33445679999999999999999999985 899999998643 233455566666554 899999999998766
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc--------CCCCEeccCCCcccEEEcCCCc
Q 002174 693 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE--------ADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 693 -~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
...++||||+++|+|.++++.. .+++..++.++.|++.||+|||+. + |+||||||+||+++.++.
T Consensus 107 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 107 WTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPA---IAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCC---EECSCCCGGGEEECTTSC
T ss_pred CCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCC---EEecccchHHEEECCCCC
Confidence 6889999999999999999654 489999999999999999999988 6 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCc------ccEeehHHHHHHHHhC---------
Q 002174 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK------SDVYSLGVVFLELLTG--------- 828 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~------sDVwSlG~ll~elltg--------- 828 (956)
+||+|||+++........ .........||+.|+|||++.+.....+ +|||||||++|||++|
T Consensus 181 ~kl~Dfg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~ 257 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNE---VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257 (337)
T ss_dssp EEECCCTTCEECC------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCC
T ss_pred EEEEeCCCceeecccccc---ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCccccccc
Confidence 999999999765432211 0111224569999999999988776665 9999999999999999
Q ss_pred -CCCCCCCc---hhHHHHHHHhhcccchhhccCCCCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 829 -MQPISHGK---NIVREVNIAYQSSMMFSVIDGNMGSYP-----SECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 829 -~~pf~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
+.||.... ........... ........+ .+++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 258 ~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 330 (337)
T 3mdy_A 258 YQLPYHDLVPSDPSYEDMREIVC-------IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330 (337)
T ss_dssp CCCTTTTTSCSSCCHHHHHHHHT-------TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccHhhhcCCCCchhhhHHHHh-------hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence 66664321 11111111111 111122222 478899999999999999999999999999999886
Q ss_pred hh
Q 002174 900 NM 901 (956)
Q Consensus 900 ~~ 901 (956)
+.
T Consensus 331 ~~ 332 (337)
T 3mdy_A 331 ES 332 (337)
T ss_dssp HT
T ss_pred hh
Confidence 54
No 192
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=353.97 Aligned_cols=286 Identities=22% Similarity=0.364 Sum_probs=205.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccc-----------
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----------- 690 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----------- 690 (956)
.++|++.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 368899999999999999999976 58999999998766666778999999999999999999998873
Q ss_pred ---cCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEEE
Q 002174 691 ---EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKV 766 (956)
Q Consensus 691 ---~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl 766 (956)
+....++||||++ |+|.+++.. ..+++..++.++.|+++||+|||+++ |+||||||+||+++ +++.+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEE
Confidence 3467899999997 699999954 35889999999999999999999999 99999999999997 5679999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
+|||+++....... .........+|..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 163 ~Dfg~~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~ 237 (320)
T 2i6l_A 163 GDFGLARIMDPHYS----HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ-MQLI 237 (320)
T ss_dssp CCCTTCBCC------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHH
T ss_pred ccCccccccCCCcc----cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 99999987542211 0112234457899999999876 6789999999999999999999999976543222 1111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCC
Q 002174 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDE-TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 924 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~-p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R 924 (956)
.. ..+....+...++...+......+ ...+.... ...+.......+++.+||..||++|
T Consensus 238 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~R 297 (320)
T 2i6l_A 238 LE----------SIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLT----------QLLPGISREAVDFLEQILTFSPMDR 297 (320)
T ss_dssp HH----------HSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHH----------HHSTTCCHHHHHHHHTTSCSSGGGS
T ss_pred HH----------hcCCCchhhhhhhhhcCcccccccccCCCCChh----------HhcchhhHHHHHHHHHHcCCCcccc
Confidence 10 011122222222221110000000 00111111 1123334455689999999999999
Q ss_pred CCCcCCCCCCcccCCC
Q 002174 925 PSSSSMLKHPYVSSDV 940 (956)
Q Consensus 925 ~sa~e~L~HP~f~~~~ 940 (956)
||++|+|+||||+...
T Consensus 298 pt~~ell~hp~~~~~~ 313 (320)
T 2i6l_A 298 LTAEEALSHPYMSIYS 313 (320)
T ss_dssp CCHHHHHTSHHHHTTC
T ss_pred CCHHHHhCCccccccc
Confidence 9999999999997543
No 193
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5.6e-38 Score=340.89 Aligned_cols=200 Identities=30% Similarity=0.461 Sum_probs=173.4
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|... +++.||||++..... .....+.+|++++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467899999999999999999965 578999999864322 2246788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999997653 4889999999999999999999998 999999999999999999999999998654321
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 211 (279)
T 3fdn_A 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT 211 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc
Confidence 2234568999999999999999999999999999999999999997543
No 194
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.6e-39 Score=376.61 Aligned_cols=258 Identities=24% Similarity=0.396 Sum_probs=206.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 468999999999999999999975 78999999986532 23456899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~ 775 (956)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++..
T Consensus 105 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 179 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHF 179 (484)
T ss_dssp ECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence 9999999999999754 35899999999999999999999999 9999999999999 56789999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ......||+.|+|||++.+ .++.++||||+||++|||++|+.||....... ..... .
T Consensus 180 ~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i---------~ 240 (484)
T 3nyv_A 180 EASK--------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD-ILKKV---------E 240 (484)
T ss_dssp CCCC--------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH---------H
T ss_pred cccc--------ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH-HHHHH---------H
Confidence 4321 2234569999999999876 68999999999999999999999997543211 11100 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCc
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+... + ..|.. +...+.+.+|+.+||..||++|||++|+|+|||
T Consensus 241 ~~~~~-~---------------------~~~~~--------------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 241 KGKYT-F---------------------ELPQW--------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp HCCCC-C---------------------CSGGG--------------GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred cCCCC-C---------------------CCccc--------------ccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 00000 0 00000 011222347889999999999999999999999
Q ss_pred ccCCC
Q 002174 936 VSSDV 940 (956)
Q Consensus 936 f~~~~ 940 (956)
|....
T Consensus 285 ~~~~~ 289 (484)
T 3nyv_A 285 IQTYT 289 (484)
T ss_dssp HHHHT
T ss_pred hcccc
Confidence 97543
No 195
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=351.28 Aligned_cols=269 Identities=26% Similarity=0.435 Sum_probs=215.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC--cE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~ 695 (956)
.++|++.+.||+|+||.||+|.+ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45788899999999999999984 368999999998766666678999999999999999999999986544 78
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 99999999999999997653 45899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhc-------
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS------- 848 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~------- 848 (956)
...... ........++..|+|||.+.+..++.++|||||||++|||++|..|+....... .......
T Consensus 196 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~--~~~~~~~~~~~~~~ 269 (326)
T 2w1i_A 196 PQDKEY----YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEF--MRMIGNDKQGQMIV 269 (326)
T ss_dssp CSSCSE----EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHH--HHHHCTTCCTHHHH
T ss_pred cccccc----cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHH--HHhhccccchhhhH
Confidence 432210 111223456778999999999889999999999999999999999885421110 0000000
Q ss_pred ccchhh-ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 849 SMMFSV-IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 849 ~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
..+.+. ..+.....+..++..+.+++.+||+.+|.+||++.++++.|+.+.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 270 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 001111 12223345667788999999999999999999999999999988654
No 196
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.5e-38 Score=351.80 Aligned_cols=291 Identities=24% Similarity=0.333 Sum_probs=210.5
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe--CCCcEEEEEEecCCChh--hHHHHHHHHHHHHhc---CCCceeeeecccc----
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL--PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCD---- 690 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~---- 690 (956)
+.++|++.+.||+|+||.||+|.. .+++.||+|++...... ....+.+|+++++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999997 36899999988643211 123566777777766 8999999999986
Q ss_pred -cCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002174 691 -EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 691 -~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
.....++||||++ |+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence 5567899999996 79999998776667899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
|+++.... ........||..|+|||++.+..++.++|||||||++|||++|+.||.................
T Consensus 165 g~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 236 (326)
T 1blx_A 165 GLARIYSF--------QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG 236 (326)
T ss_dssp CSCCCCCG--------GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred cccccccC--------CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcC
Confidence 99976532 1122345689999999999999999999999999999999999999976543222111100000
Q ss_pred cc-hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCc
Q 002174 850 MM-FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 850 ~~-~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
.. ....... ...+. ..+.. ...+. +....+.......+++.+||..||++|||++
T Consensus 237 ~~~~~~~~~~-~~~~~-----------~~~~~--~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 292 (326)
T 1blx_A 237 LPGEEDWPRD-VALPR-----------QAFHS--KSAQP----------IEKFVTDIDELGKDLLLKCLTFNPAKRISAY 292 (326)
T ss_dssp CCCGGGSCTT-CSSCG-----------GGSCC--CCCCC----------GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCcccCccc-cccch-----------hhhcc--cCcch----------hhhccccCCHHHHHHHHHHcCCCcccCCCHH
Confidence 00 0000000 00000 00000 00000 0111222333445799999999999999999
Q ss_pred CCCCCCcccCCCCCCccccc
Q 002174 929 SMLKHPYVSSDVSGSNLVSG 948 (956)
Q Consensus 929 e~L~HP~f~~~~~~~~~~~~ 948 (956)
|+|+||||.........+..
T Consensus 293 e~l~hp~~~~~~~~~~~~~~ 312 (326)
T 1blx_A 293 SALSHPYFQDLERCKENLDS 312 (326)
T ss_dssp HHHTSGGGTTCCCCCCC---
T ss_pred HHhcCccccccchhhhhhcc
Confidence 99999999876554333333
No 197
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4.6e-38 Score=344.91 Aligned_cols=259 Identities=25% Similarity=0.355 Sum_probs=204.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC---------hhhHHHHHHHHHHHHhcC-CCceeeeeccccc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---------LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 691 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 691 (956)
.++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 468999999999999999999975 68999999987532 112356789999999996 9999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
.+..++||||+++++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccc
Confidence 99999999999999999999764 35889999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccc------cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
+....... ......|++.|+|||++. ...++.++||||||+++|||++|+.||........ ...
T Consensus 171 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~- 240 (298)
T 1phk_A 171 SCQLDPGE--------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLM-LRM- 240 (298)
T ss_dssp CEECCTTC--------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHH-
T ss_pred hhhcCCCc--------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHH-HHH-
Confidence 98754321 123456899999999985 45688899999999999999999999965432111 000
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCC
Q 002174 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ 925 (956)
+........ .|... .......+++.+||..||++||
T Consensus 241 ---------------------------~~~~~~~~~---~~~~~--------------~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 241 ---------------------------IMSGNYQFG---SPEWD--------------DYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp ---------------------------HHHTCCCCC---TTTGG--------------GSCHHHHHHHHHHCCSSGGGSC
T ss_pred ---------------------------HhcCCcccC---ccccc--------------ccCHHHHHHHHHHccCCcccCC
Confidence 000000000 00000 0111223678888999999999
Q ss_pred CCcCCCCCCcccCCC
Q 002174 926 SSSSMLKHPYVSSDV 940 (956)
Q Consensus 926 sa~e~L~HP~f~~~~ 940 (956)
|++|+|+||||.+..
T Consensus 277 s~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 277 TAEEALAHPFFQQYV 291 (298)
T ss_dssp CHHHHTTSGGGCTTC
T ss_pred CHHHHHhChHhhhcc
Confidence 999999999997643
No 198
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.1e-37 Score=344.21 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=203.0
Q ss_pred cCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++++++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5788999999999999999996 47899999998753 2334567899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002174 700 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 700 E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||+++++|.+++.. .....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 99999999999865 23456899999999999999999999999 99999999999999999999999999976542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.. .......|++.|+|||++.+..++.++||||||+++|||++|+.||.............. ...
T Consensus 189 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------~~~ 253 (310)
T 2wqm_A 189 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--------EQC 253 (310)
T ss_dssp -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH--------HTT
T ss_pred CC-------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh--------hcc
Confidence 21 112334689999999999999999999999999999999999999975432211111111 111
Q ss_pred CCCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 858 NMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 858 ~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
..... +..++..+.+++.+||+.+|.+||++.++++.|+++....
T Consensus 254 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 254 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 11221 2456678999999999999999999999999999987653
No 199
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.1e-38 Score=350.39 Aligned_cols=261 Identities=27% Similarity=0.447 Sum_probs=210.6
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe------CCCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
..++|++.+.||+|+||.||+|.+ .+++.||||++... ......++.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 357899999999999999999984 24778999999754 33445688999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEE
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKV 766 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl 766 (956)
.++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999986532 35889999999999999999999999 999999999999984 456999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002174 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~ 845 (956)
+|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++ |+.||...... +...
T Consensus 185 ~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~-- 256 (327)
T 2yfx_A 185 GDFGMARDIYRASY-----YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLE-- 256 (327)
T ss_dssp CCCHHHHHHHC-----------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHH--
T ss_pred Cccccccccccccc-----cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH-HHHH--
Confidence 99999975432221 112234457889999999999999999999999999999998 99999754432 1111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+..+.....+..++..+.+++.+||+.+|.+||++.++++.++.+..
T Consensus 257 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 257 -------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ 304 (327)
T ss_dssp -------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence 112222334456677889999999999999999999999999987754
No 200
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=356.75 Aligned_cols=268 Identities=18% Similarity=0.180 Sum_probs=200.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCCChhh-----------HHHHHHHHHHHHhcCCCceeeeec
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQG-----------EKEFLTEIQFLSRLHHRNLVSLVG 687 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~nIv~l~~ 687 (956)
.++|++.+.||+|+||+||+|... ++..||||+........ ...+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367889999999999999999975 57889999987543211 124667888999999999999999
Q ss_pred cccc----CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-
Q 002174 688 YCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF- 762 (956)
Q Consensus 688 ~~~~----~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~- 762 (956)
++.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence 9876 67899999999 999999997654 6899999999999999999999999 99999999999999887
Q ss_pred -cEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch-hH-
Q 002174 763 -TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IV- 839 (956)
Q Consensus 763 -~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~-~~- 839 (956)
.+||+|||+++....................||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 999999999987643221111111222455799999999999999999999999999999999999999954211 11
Q ss_pred -HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 840 -REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 840 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.......... ....+.... .+..++..+.+++..||..+|.+||++.++++.|+...
T Consensus 270 ~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 270 VQTAKTNLLDE-LPQSVLKWA--PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHHT-TTHHHHHHS--CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHHhhccc-ccHHHHhhc--cccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 1111111000 000000000 01145568999999999999999999999999988653
No 201
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=353.65 Aligned_cols=270 Identities=16% Similarity=0.195 Sum_probs=214.7
Q ss_pred HHhcCCCCCCeeeeeCCeeEEEEE------eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC---CCceeeeeccccc
Q 002174 621 LATNNFNSSTQIGQGGYGKVYKGI------LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDE 691 (956)
Q Consensus 621 ~~~~~~~~~~~lG~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 691 (956)
...++|.+.+.||+|+||+||+|. ..+++.||||++.... ..++..|++++++++ |+||+++++++..
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 345789999999999999999994 3468999999997643 346778888888887 9999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhc---CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC--------
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------- 760 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-------- 760 (956)
.+..++||||+++|+|.+++... ....+++..++.|+.||++||+|||+.+ ||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999752 3456999999999999999999999999 999999999999998
Q ss_pred ---CCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch
Q 002174 761 ---KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 761 ---~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~ 837 (956)
++.+||+|||+|+...... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~ 290 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFP-----KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEG 290 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSC-----TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEET
T ss_pred ccccCCEEEeeCchhhhhhccC-----CCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCC
Confidence 8999999999997543211 12334556799999999999999999999999999999999999999964322
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhHhhCCCCCCCCccccccc
Q 002174 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSE 916 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L~~~~~~~~~~~~~~~~ll~~~ 916 (956)
. . ..+.......+ ..+.+.+++..|++.+|.+| |++.++.+.|+++...-. ....+.+.++
T Consensus 291 ~------------~-~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~---~~~~~~l~~~ 352 (365)
T 3e7e_A 291 G------------E-CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHY---TNKIRALRNR 352 (365)
T ss_dssp T------------E-EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHT---TTTHHHHHHH
T ss_pred C------------c-eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhh---hhchHHHHHH
Confidence 0 0 01111222222 24567788899999999988 688888888888876532 2334555555
Q ss_pred CCC
Q 002174 917 HTS 919 (956)
Q Consensus 917 L~~ 919 (956)
|..
T Consensus 353 l~~ 355 (365)
T 3e7e_A 353 LIV 355 (365)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 202
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=348.12 Aligned_cols=269 Identities=25% Similarity=0.397 Sum_probs=201.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHH--HHhcCCCceeeeeccc-----ccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQF--LSRLHHRNLVSLVGYC-----DEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~nIv~l~~~~-----~~~~~~ 695 (956)
.++|++.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++|+||+++++++ ......
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 46888999999999999999987 68999999987433 2344444444 4558999999999743 334467
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc---------CCCCEeccCCCcccEEEcCCCcEEE
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE---------ADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
++||||+++|+|.+++.... .++..++.++.||++||+|||+. + |+||||||+|||++.++.+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred EEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence 89999999999999997643 57888999999999999999998 7 999999999999999999999
Q ss_pred EeeccccccCCCCCCCc-cccceecccccCCCccccccccc-------CCCCCcccEeehHHHHHHHHhCCCCCCCCchh
Q 002174 767 ADFGLSRLAPVPDIEGI-VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNI 838 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~ 838 (956)
+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987653321110 01122234569999999999987 45667899999999999999998887543221
Q ss_pred ----------------HHHHHHHhhcccchhhccCCCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 839 ----------------VREVNIAYQSSMMFSVIDGNMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 839 ----------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
............ ..+..+ .....++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREK----QRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccc----cCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 000110000000 001111 113457788999999999999999999999999999988
Q ss_pred hhCCCC
Q 002174 900 NMMPES 905 (956)
Q Consensus 900 ~~~~~~ 905 (956)
..+...
T Consensus 318 ~~~~~~ 323 (336)
T 3g2f_A 318 MIWERN 323 (336)
T ss_dssp HCCCC-
T ss_pred HHHHhc
Confidence 766443
No 203
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=4.8e-38 Score=353.65 Aligned_cols=294 Identities=21% Similarity=0.294 Sum_probs=208.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC-----CcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 695 (956)
.++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 468899999999999999999975 68999999987533 33456788999999999999999999987653 678
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 90 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999996 6999998763 4889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCcc---ccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002174 776 PVPDIEGIV---PAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 776 ~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
......... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............ ......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~ 241 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI-FGIIGT 241 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH-HHHHCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH-HHHhCC
Confidence 532211100 0011233568999999998765 67899999999999999999999999765432221111 100000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCC
Q 002174 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
.. .+.......... ..+.+.. +...+ ++... ...+...+...+++.+||..||++|||++|+|
T Consensus 242 ~~-~~~~~~~~~~~~---~~~~~~~-~~~~~--~~~~~----------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 304 (353)
T 2b9h_A 242 PH-SDNDLRCIESPR---AREYIKS-LPMYP--AAPLE----------KMFPRVNPKGIDLLQRMLVFDPAKRITAKEAL 304 (353)
T ss_dssp CC-STTTTTTCCCHH---HHHHHHT-SCCCC--CCCHH----------HHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred Cc-hhccccccccch---hhHHhhc-ccCCC--Ccchh----------hhcccCCHHHHHHHHHhcCcCcccCCCHHHHh
Confidence 00 000000000111 1111100 00000 11111 11233444556899999999999999999999
Q ss_pred CCCcccCCCC
Q 002174 932 KHPYVSSDVS 941 (956)
Q Consensus 932 ~HP~f~~~~~ 941 (956)
+||||.....
T Consensus 305 ~hp~~~~~~~ 314 (353)
T 2b9h_A 305 EHPYLQTYHD 314 (353)
T ss_dssp TSGGGTTTCC
T ss_pred cCccccccCC
Confidence 9999976543
No 204
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.3e-38 Score=357.47 Aligned_cols=275 Identities=21% Similarity=0.303 Sum_probs=210.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhh-----------------HHHHHHHHHHHHhcCCCceeee
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-----------------EKEFLTEIQFLSRLHHRNLVSL 685 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~nIv~l 685 (956)
.++|++.+.||+|+||.||+|.. +++.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 89999999987432211 1689999999999999999999
Q ss_pred ecccccCCcEEEEEecCCCCCHHHH------HhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEE
Q 002174 686 VGYCDEEGEQMLVYEFMSNGTLRDQ------LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILL 758 (956)
Q Consensus 686 ~~~~~~~~~~~LV~E~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl 758 (956)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|++.||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999998 655445679999999999999999999999 88 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-CCCC-cccEeehHHHHHHHHhCCCCCCCCc
Q 002174 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTD-KSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
+.++.+||+|||.+...... ......|+..|+|||++.+. .++. ++|||||||++|||++|+.||....
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 256 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK---------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKI 256 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT---------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCCcEEEeccccccccccc---------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99999999999999865321 23445689999999999887 6666 8999999999999999999997654
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccc
Q 002174 837 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSE 916 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~ 916 (956)
...+....... +. ...+..... .. .+...... ....+.......+++.+|
T Consensus 257 ~~~~~~~~i~~---------~~-~~~~~~~~~--------~~--~~~~~~~~----------~~~~~~~~~~l~~li~~~ 306 (348)
T 2pml_X 257 SLVELFNNIRT---------KN-IEYPLDRNH--------FL--YPLTNKKS----------TCSNNFLSNEDIDFLKLF 306 (348)
T ss_dssp CSHHHHHHHTS---------CC-CCCCCSSSS--------ST--TTTCC------------------CCCHHHHHHHHHH
T ss_pred cHHHHHHHHhc---------cC-cCCccchhh--------hh--cccccccc----------ccchhhcCHHHHHHHHHH
Confidence 42222221110 00 011100000 00 00000000 000112223345789999
Q ss_pred CCCCCCCCCCCcCCCCCCcccCCC
Q 002174 917 HTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 917 L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
|..||++|||++|+++||||.+..
T Consensus 307 L~~dP~~Rps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 307 LRKNPAERITSEDALKHEWLADTN 330 (348)
T ss_dssp CCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred ccCChhhCCCHHHHhcCccccCCC
Confidence 999999999999999999997643
No 205
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-38 Score=374.41 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=205.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||+||+|... +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 3468999999999999999999975 78999999986422 22356789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc---CCCcEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~---~~~~~kl~DfGla~~~ 775 (956)
|||+++|+|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++..
T Consensus 100 ~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999999987653 4889999999999999999999999 99999999999995 4567999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... .......||+.|+|||++.+ .++.++||||+||++|||++|+.||....... ..... .
T Consensus 175 ~~~--------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i---------~ 235 (486)
T 3mwu_A 175 QQN--------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD-ILKRV---------E 235 (486)
T ss_dssp CCC------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH---------H
T ss_pred CCC--------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH---------H
Confidence 422 12234569999999999876 58999999999999999999999997543211 11100 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCCCc
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+.. +...|.. +...+.+.+||.+||..||++|||++|+|+|||
T Consensus 236 ~~~~----------------------~~~~~~~--------------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~ 279 (486)
T 3mwu_A 236 TGKY----------------------AFDLPQW--------------RTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279 (486)
T ss_dssp HTCC----------------------CSCSGGG--------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHH
T ss_pred hCCC----------------------CCCCccc--------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHh
Confidence 0000 0000100 011222347888999999999999999999999
Q ss_pred ccCCCC
Q 002174 936 VSSDVS 941 (956)
Q Consensus 936 f~~~~~ 941 (956)
|.....
T Consensus 280 ~~~~~~ 285 (486)
T 3mwu_A 280 IQKYSS 285 (486)
T ss_dssp HHHTCC
T ss_pred hccCcc
Confidence 976544
No 206
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.4e-38 Score=357.19 Aligned_cols=297 Identities=22% Similarity=0.263 Sum_probs=199.4
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCc-
Q 002174 617 GEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE- 694 (956)
Q Consensus 617 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~- 694 (956)
.+.....++|++.+.||+|+||+||+|... +++.||||++..... ....+.+|++.++.++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 345567789999999999999999999975 689999998865332 22356778888999999999999999855333
Q ss_pred ------EEEEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhh--hcCCCCEeccCCCcccEEEcC-CCc
Q 002174 695 ------QMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLH--TEADPPVFHRDIKASNILLDH-KFT 763 (956)
Q Consensus 695 ------~~LV~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivH~Dlk~~NILl~~-~~~ 763 (956)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~ 170 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGT 170 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTE
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCc
Confidence 7899999965 66555443 23456888999999999999999999 888 999999999999997 899
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHH
Q 002174 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~ 842 (956)
+||+|||+++...... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||..........
T Consensus 171 ~kl~Dfg~a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 242 (360)
T 3e3p_A 171 LKLCDFGSAKKLSPSE--------PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLH 242 (360)
T ss_dssp EEECCCTTCBCCCTTS--------CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred EEEeeCCCceecCCCC--------CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHH
Confidence 9999999998764322 12345689999999999765 48999999999999999999999997654322211
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCC
Q 002174 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEE 922 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~ 922 (956)
... . ..+..+.+....+..-. .........+.....+. ............+|+.+||+.||+
T Consensus 243 ~~~-~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~ 304 (360)
T 3e3p_A 243 EIV-R----------VLGCPSREVLRKLNPSH-TDVDLYNSKGIPWSNVF------SDHSLKDAKEAYDLLSALLQYLPE 304 (360)
T ss_dssp HHH-H----------HHCCCCHHHHHHHCTTC-CCGGGGCCCCCCHHHHT------TTCCCTTHHHHHHHHHHHTCSSGG
T ss_pred HHH-H----------HcCCCCHHHHHhcccch-hhccccccccCCccccc------chhhccccHHHHHHHHHHhccCcc
Confidence 110 0 00111221111110000 00000000111111110 000111223346899999999999
Q ss_pred CCCCCcCCCCCCcccCCCCCCc
Q 002174 923 TPPSSSSMLKHPYVSSDVSGSN 944 (956)
Q Consensus 923 ~R~sa~e~L~HP~f~~~~~~~~ 944 (956)
+|||++|+|+||||.+......
T Consensus 305 ~Rpt~~e~l~hp~f~~~~~~~~ 326 (360)
T 3e3p_A 305 ERMKPYEALCHPYFDELHDPAT 326 (360)
T ss_dssp GSCCHHHHTTSGGGGGGGCTTC
T ss_pred ccCCHHHHhcCccccccCCccc
Confidence 9999999999999987655433
No 207
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.1e-37 Score=349.46 Aligned_cols=199 Identities=31% Similarity=0.507 Sum_probs=172.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|+..+.||+|+||+||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 35688889999999999999996 5799999999875432 2235789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||++ |+|.+++... ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP- 206 (348)
T ss_dssp EECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-
T ss_pred EecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC-
Confidence 99996 7898888653 346899999999999999999999999 99999999999999999999999999976532
Q ss_pred CCCCccccceecccccCCCcccccccc---cCCCCCcccEeehHHHHHHHHhCCCCCCCCch
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~ 837 (956)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||.....
T Consensus 207 ----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 258 (348)
T 1u5q_A 207 ----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 258 (348)
T ss_dssp ----------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ----------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 12346899999999985 56789999999999999999999999975543
No 208
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-37 Score=344.00 Aligned_cols=259 Identities=19% Similarity=0.260 Sum_probs=202.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
-++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 468999999999999999999975 689999999875432 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999997643 5889999999999999999999999 999999999999999999999999999765432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. ........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .......... ..
T Consensus 188 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~------~~ 253 (309)
T 2h34_A 188 K------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAI------PR 253 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCC------CC
T ss_pred c------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCC------CC
Confidence 1 11223456899999999999999999999999999999999999999765432 1111111000 00
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHh
Q 002174 859 MGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWN 900 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~ 900 (956)
....+..++..+.+++.+||+.+|++|| ++.++++.|+....
T Consensus 254 ~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 254 PSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp GGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred ccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 1122445567889999999999999999 99999999987643
No 209
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.1e-37 Score=354.96 Aligned_cols=250 Identities=23% Similarity=0.338 Sum_probs=199.4
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcC--CCceeeeecccccCCcEEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.+|++.+.||+|+||+||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 5689999999999999999998889999999986533 334568899999999996 599999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
| +.+++|.+++.... .+++..++.++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++......
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56899999997653 5788899999999999999999999 99999999999996 5899999999998764321
Q ss_pred CCCccccceecccccCCCccccccccc-----------CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~ 848 (956)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+.......
T Consensus 209 -----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~---- 279 (390)
T 2zmd_A 209 -----TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA---- 279 (390)
T ss_dssp ----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH----
T ss_pred -----ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHH----
Confidence 1112234569999999999875 36888999999999999999999999764433222221
Q ss_pred ccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 849 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 849 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
++++.. ..++...+..+.+++.+||+.+|.+||++.++++.
T Consensus 280 -----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 280 -----IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp -----HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred -----HhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 122211 22344445678889999999999999999998864
No 210
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.3e-38 Score=377.24 Aligned_cols=251 Identities=27% Similarity=0.401 Sum_probs=204.6
Q ss_pred CeeeeeCCeeEEEEEeC---CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002174 630 TQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~~~~ 704 (956)
+.||+|+||+||+|.+. .++.||||+++.... ...+++.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999753 468899999976432 335789999999999999999999999964 568999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002174 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..++.|+.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+........
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~--- 525 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--- 525 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc---
Confidence 9999999764 35889999999999999999999999 999999999999999999999999999876433211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002174 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
........+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ... .+..+.....|
T Consensus 526 -~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-~~~---------~i~~~~~~~~p 594 (635)
T 4fl3_A 526 -YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-VTA---------MLEKGERMGCP 594 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHH---------HHHTTCCCCCC
T ss_pred -cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-HHH---------HHHcCCCCCCC
Confidence 112233456789999999999999999999999999999998 999997654321 111 11223334556
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 864 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..++.++.+++..||+.+|++||++.++++.|+++..
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999998764
No 211
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7e-38 Score=348.46 Aligned_cols=257 Identities=29% Similarity=0.483 Sum_probs=209.4
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcE--EEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTV--VAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV 698 (956)
++|++.+.||+|+||.||+|... ++.. ||+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 67888999999999999999964 5664 4999887532 23345789999999999 899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002174 699 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
|||+++|+|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997643 246899999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002174 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 843 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~ 843 (956)
||+|||+++.... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||...... +...
T Consensus 182 kL~Dfg~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~ 252 (327)
T 1fvr_A 182 KIADFGLSRGQEV--------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYE 252 (327)
T ss_dssp EECCTTCEESSCE--------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHH
T ss_pred EEcccCcCccccc--------cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHH
Confidence 9999999974321 111233457889999999999889999999999999999998 99999754432 1111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.+..+.....+..++..+.+++.+|+..+|.+||++.++++.|+.+...
T Consensus 253 ---------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 253 ---------KLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp ---------HGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ---------HhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1112222344556678899999999999999999999999999988764
No 212
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=343.90 Aligned_cols=270 Identities=23% Similarity=0.299 Sum_probs=209.7
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccc----cCCcEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----EEGEQM 696 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~ 696 (956)
..++|++.+.||+|+||.||+|.. .+++.||||++........+.+.+|++++++++||||+++++++. .....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 457899999999999999999996 579999999987666666778999999999999999999999986 345789
Q ss_pred EEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 697 LVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
+||||+++|+|.+++... ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999999999752 3456899999999999999999999999 99999999999999999999999999876
Q ss_pred cCCCCCCCcc--ccceecccccCCCcccccccccCC---CCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002174 775 APVPDIEGIV--PAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 775 ~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
.......... .........||+.|+|||++.+.. ++.++|||||||++|||++|+.||............
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----- 258 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL----- 258 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHH-----
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhH-----
Confidence 4311100000 000112345799999999987654 688999999999999999999999421100000000
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
........+.+..++..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus 259 ---~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 259 ---AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp ---HHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred ---HhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 00111112223456678999999999999999999999999999875443
No 213
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=9.1e-38 Score=342.06 Aligned_cols=270 Identities=19% Similarity=0.286 Sum_probs=207.0
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccc-ccCCcEEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVY 699 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~LV~ 699 (956)
..++|++.+.||+|+||+||+|.. .+++.||||++...... +.+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999999996 57899999987643322 3578899999999988877766665 6677889999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeeccccccC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~~ 776 (956)
||+ +++|.+++.... ..+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~ 159 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Ecc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence 999 999999997543 35899999999999999999999999 9999999999999 789999999999998765
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchh--HHHHHHHhhcccchhh
Q 002174 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQSSMMFSV 854 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~ 854 (956)
........+........||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .......... .
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~---- 234 (296)
T 4hgt_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEK-K---- 234 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHH-H----
T ss_pred CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcc-c----
Confidence 44322211222334567999999999999999999999999999999999999999753211 0000000000 0
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
...........++..+.+++..||+.+|++||++.++++.|+++.....
T Consensus 235 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 235 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred ccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0000000112345789999999999999999999999999999877543
No 214
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.5e-37 Score=335.94 Aligned_cols=266 Identities=19% Similarity=0.289 Sum_probs=210.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccc-ccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~LV~E 700 (956)
.++|++.+.||+|+||.||+|.. .+++.||||++...... +.+.+|+++++.++|++++..++++ ...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC--CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch--hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46899999999999999999996 57999999998754332 3688999999999988877666655 56677899999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeeccccccCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~ 777 (956)
|+ +++|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||++ +.++.+||+|||+++....
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 86 LL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred ec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99 99999999753 345899999999999999999999999 9999999999999 4889999999999987654
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch-----hHHHHHHHhhcccch
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-----IVREVNIAYQSSMMF 852 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~-----~~~~~~~~~~~~~~~ 852 (956)
.......+........||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .........
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~------ 234 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK------ 234 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHH------
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccc------
Confidence 432211111223456799999999999999999999999999999999999999975321 111111000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
........+..++..+.+++.+||+.+|.+||++.++++.|+.+.....
T Consensus 235 --~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 235 --MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp --HHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred --cCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 0000000123345789999999999999999999999999999876543
No 215
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=357.65 Aligned_cols=267 Identities=22% Similarity=0.285 Sum_probs=212.6
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCC--cEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~LV 698 (956)
.++|.+.+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|++++++++||||+++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 367889999999999999999976 589999999875432 33567889999999999999999999987654 78999
Q ss_pred EecCCCCCHHHHHhhcC-CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE----cCCCcEEEEeecccc
Q 002174 699 YEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLSR 773 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~DfGla~ 773 (956)
|||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997643 234899999999999999999999999 9999999999999 788889999999998
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc--------CCCCCcccEeehHHHHHHHHhCCCCCCCCch---hHHHH
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--------HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREV 842 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDVwSlG~ll~elltg~~pf~~~~~---~~~~~ 842 (956)
..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ..+..
T Consensus 165 ~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~ 236 (396)
T 4eut_A 165 ELEDD--------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVM 236 (396)
T ss_dssp ECCCG--------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHH
T ss_pred EccCC--------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHH
Confidence 75422 12234569999999999875 5678899999999999999999999964221 11211
Q ss_pred HHHhhcc---cchhh---------cc---CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 843 NIAYQSS---MMFSV---------ID---GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 843 ~~~~~~~---~~~~~---------~~---~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
....... .+... .. +.....+......+.+++.+|++.||++||++.++++.++++..
T Consensus 237 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 237 YKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred HHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 1111110 00000 00 11123457888999999999999999999999999999998765
No 216
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.6e-38 Score=353.76 Aligned_cols=290 Identities=19% Similarity=0.276 Sum_probs=210.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CC-cEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc------eeeeecccccCCc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN------LVSLVGYCDEEGE 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------Iv~l~~~~~~~~~ 694 (956)
.++|++.+.||+|+||+||+|... ++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 468999999999999999999964 34 78999999753 344567889999999998766 8999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE----------------
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---------------- 758 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---------------- 758 (956)
.++||||+ +++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||+
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 778888887766567999999999999999999999998 9999999999999
Q ss_pred ---cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 759 ---DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 759 ---~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 242 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEH----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTH 242 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSC----------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccCCCcEEEeecCcccccccc----------ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCC
Confidence 66889999999999864321 23356899999999999999999999999999999999999999765
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH----hhCCC---CCCC
Q 002174 836 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW----NMMPE---SDTK 908 (956)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~----~~~~~---~~~~ 908 (956)
.......... . ..+..|.........- .... ......+........+.... ..... ....
T Consensus 243 ~~~~~~~~~~-------~----~~~~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 2eu9_A 243 ENREHLVMME-------K----ILGPIPSHMIHRTRKQ-KYFY-KGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309 (355)
T ss_dssp SHHHHHHHHH-------H----HHCCCCHHHHHHCSCG-GGEE-TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred CHHHHHHHHH-------H----HcCCCcHHHhhhccch-hhhc-ccccccccccchhccccccCCcccccccccchhHHH
Confidence 4322111110 0 0122233222111000 0000 00000000000001111100 00000 0112
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
..+++.+||..||++|||++|+|+||||.+..
T Consensus 310 l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 341 (355)
T 2eu9_A 310 LFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 341 (355)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred HHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence 34799999999999999999999999998643
No 217
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.3e-38 Score=350.34 Aligned_cols=200 Identities=28% Similarity=0.446 Sum_probs=168.3
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh--------hhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
..++|++.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4568999999999999999999975 689999999875321 1124578999999999999999999998765
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc---EEEEee
Q 002174 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADF 769 (956)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~Df 769 (956)
+ .++||||+++++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||+++.++. +||+||
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Df 161 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDF 161 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCC
T ss_pred c-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccC
Confidence 4 89999999999999998653 45889999999999999999999999 999999999999987664 999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccc---cCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
|+++..... .......||+.|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 162 g~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 222 (322)
T 2ycf_A 162 GHSKILGET--------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222 (322)
T ss_dssp TTCEECCCC--------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCST
T ss_pred ccceecccc--------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 999865321 1123456899999999974 467889999999999999999999999643
No 218
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=350.95 Aligned_cols=200 Identities=24% Similarity=0.374 Sum_probs=174.6
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh--------hHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
..++|++.+.||+|+||+||+|... +++.||||++...... ..+.+.+|++++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3578999999999999999999964 6899999998754321 223577899999999999999999999999
Q ss_pred CcEEEEEecCCCC-CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002174 693 GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 693 ~~~~LV~E~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
+..++||||+.+| +|.+++.... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeeccc
Confidence 9999999999777 9999997643 4899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCC
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
++...... ......||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 177 a~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 177 AAYLERGK--------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CEECCTTC--------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred ceECCCCC--------ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 98764322 1234568999999999998876 7889999999999999999999964
No 219
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.8e-37 Score=338.06 Aligned_cols=200 Identities=27% Similarity=0.391 Sum_probs=170.6
Q ss_pred CCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002174 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E~~~ 703 (956)
+|.....||+|+||.||+|... +++.||||.+........+.+.+|+.+++.++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 4555669999999999999964 689999999987665556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcC-CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccccCCCCCC
Q 002174 704 NGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 704 ~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|.+++.... ...+++..+..++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||++.......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999997653 345678889999999999999999999 999999999999987 8999999999998654221
Q ss_pred CccccceecccccCCCcccccccccCC--CCCcccEeehHHHHHHHHhCCCCCCC
Q 002174 782 GIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
.......|++.|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 178 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 227 (295)
T 2clq_A 178 -----PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYE 227 (295)
T ss_dssp --------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGG
T ss_pred -----CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccC
Confidence 1123456899999999997653 78899999999999999999999964
No 220
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.8e-38 Score=339.24 Aligned_cols=253 Identities=24% Similarity=0.406 Sum_probs=191.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccc--ccCCcEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYC--DEEGEQML 697 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~~~L 697 (956)
.++|++.+.||+|+||+||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++ ...+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 467889999999999999999975 68999999987543 33456789999999999999999999987 44678999
Q ss_pred EEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcC--CCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 698 VYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 698 V~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
||||+++++|.+++... ....+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999753 3345899999999999999999999976 2349999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
...... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .... .
T Consensus 165 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~---------~ 227 (279)
T 2w5a_A 165 ILNHDT-------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK-ELAG---------K 227 (279)
T ss_dssp HC---C-------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHH---------H
T ss_pred eecccc-------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH-HHHH---------H
Confidence 654221 1123356899999999999999999999999999999999999999754321 1111 1
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVM 892 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~ 892 (956)
+..+.....+..++..+.+++.+||+.+|.+||++.+++
T Consensus 228 i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll 266 (279)
T 2w5a_A 228 IREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266 (279)
T ss_dssp HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 111222233334444555555555555555555544444
No 221
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.3e-37 Score=337.01 Aligned_cols=200 Identities=29% Similarity=0.456 Sum_probs=176.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 357889999999999999999975 688999999864321 2246789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|.+++.... .+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 99999999999997653 4889999999999999999999999 999999999999999999999999998764321
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
......|++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 168 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 168 ---------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp ---------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ---------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 1233568999999999999999999999999999999999999997544
No 222
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.8e-38 Score=356.42 Aligned_cols=290 Identities=17% Similarity=0.274 Sum_probs=207.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-----------CCceeeeecccc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-----------HRNLVSLVGYCD 690 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~nIv~l~~~~~ 690 (956)
.++|++.+.||+|+||+||+|.. .+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 36799999999999999999996 47899999999753 334567889999998886 899999999987
Q ss_pred cCC----cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEc------
Q 002174 691 EEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLD------ 759 (956)
Q Consensus 691 ~~~----~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~------ 759 (956)
..+ ..++||||+ +++|.+++.......+++..++.++.||+.||+|||++ + |+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 544 789999999 89999999876666799999999999999999999998 8 99999999999994
Q ss_pred CCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchh-
Q 002174 760 HKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI- 838 (956)
Q Consensus 760 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~- 838 (956)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 242 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH----------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 242 (373)
T ss_dssp TEEEEEECCCTTCEETTBC----------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC-------
T ss_pred CcceEEEcccccccccCCC----------CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccc
Confidence 4458999999999865321 22346899999999999999999999999999999999999999753311
Q ss_pred ----HHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCC-------CCCCCHHHHHHHHHHhHhhCCCCCC
Q 002174 839 ----VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDET-------DARPSMSEVMRELESIWNMMPESDT 907 (956)
Q Consensus 839 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p-------~~RPs~~~v~~~L~~~~~~~~~~~~ 907 (956)
...... +.+. .+..|......-. .....+.... .......+++. ......+....
T Consensus 243 ~~~~~~~~~~------~~~~----~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 308 (373)
T 1q8y_A 243 YTKDDDHIAQ------IIEL----LGELPSYLLRNGK-YTRTFFNSRGLLRNISKLKFWPLEDVLT---EKYKFSKDEAK 308 (373)
T ss_dssp --CHHHHHHH------HHHH----HCSCCHHHHHHCT-THHHHBCC--CBSSCCCCCBCCHHHHHH---HTTCCCHHHHH
T ss_pred cCChHHHHHH------HHHh----cCCCCHHHHhccc-hhhhhcCCcchhcccccccccchhhhhh---hcccCCcchHH
Confidence 000000 0011 1222322211100 0011111100 00111222221 11000011122
Q ss_pred CCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 908 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 908 ~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
...+||.+||..||++|||++|+|+||||.+...
T Consensus 309 ~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 342 (373)
T 1q8y_A 309 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLG 342 (373)
T ss_dssp HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCTT
T ss_pred HHHHHHHHHhccCccccCCHHHHhhChhhhcccC
Confidence 3458999999999999999999999999987543
No 223
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.9e-37 Score=335.85 Aligned_cols=201 Identities=26% Similarity=0.415 Sum_probs=174.5
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh------hHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.+.||+|+||+||+|... +++.||+|.++..... ..+.+.+|++++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467899999999999999999976 6899999998753321 356899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC----cEEEEeecc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGL 771 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DfGl 771 (956)
++||||+++++|.+++... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999999764 35889999999999999999999999 99999999999998877 899999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
+....... ......|++.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 159 ~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 215 (283)
T 3bhy_A 159 AHKIEAGN--------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET 215 (283)
T ss_dssp CEECC----------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred ceeccCCC--------cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc
Confidence 98654221 1233468999999999999999999999999999999999999997544
No 224
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=8.1e-37 Score=336.21 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=200.7
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC----hhhHHHHHHHHHHHHhcCCCceeeeeccc--ccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRLHHRNLVSLVGYC--DEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~--~~~~~~ 695 (956)
.++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|++++++++||||+++++++ .+.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 468999999999999999999974 68999999987532 22356889999999999999999999998 455688
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||++++ |.+++.......+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999765 888887766667999999999999999999999999 999999999999999999999999999875
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCC--CCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
..... ........||+.|+|||++.+.. ++.++||||||+++|||++|+.||...... ......
T Consensus 160 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~i-------- 225 (305)
T 2wtk_C 160 HPFAA-----DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY-KLFENI-------- 225 (305)
T ss_dssp CTTCS-----SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHH--------
T ss_pred Ccccc-----ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHH--------
Confidence 43221 12233456899999999998644 377999999999999999999999754322 111111
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.......+..++..+.+++.+|++.+|.+||++.++++.
T Consensus 226 --~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 226 --GKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp --HHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred --hcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111123344566778888888888888888888888763
No 225
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=5.4e-37 Score=337.38 Aligned_cols=201 Identities=29% Similarity=0.441 Sum_probs=177.2
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.+.|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 456888999999999999999964 68999999987543 3345789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 9999999999964 35899999999999999999999999 9999999999999999999999999997654321
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||....
T Consensus 174 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 223 (303)
T 3a7i_A 174 ------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH 223 (303)
T ss_dssp ------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC
Confidence 11234568999999999999999999999999999999999999997543
No 226
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.2e-38 Score=356.66 Aligned_cols=198 Identities=12% Similarity=0.035 Sum_probs=152.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhc--CCCceeeeec-------cc
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL--HHRNLVSLVG-------YC 689 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~nIv~l~~-------~~ 689 (956)
..+|++.+.||+|+||+||+|.+. +++.||||++..... ...+.+.+|+++++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888999999999999999965 789999999987543 2345677885544444 6999887553 33
Q ss_pred ccC-----------------CcEEEEEecCCCCCHHHHHhhcCCCCchhHHH------HHHHHHHHHHHHHhhhcCCCCE
Q 002174 690 DEE-----------------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR------LSIALGSSRGILYLHTEADPPV 746 (956)
Q Consensus 690 ~~~-----------------~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~i 746 (956)
... ...++||||++ |+|.+++..... .+.+..+ ..++.||++||+|||+++ |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---i 215 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKG---L 215 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---C
Confidence 222 33799999998 899999976422 2355555 778899999999999999 9
Q ss_pred eccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc--CCCCCcccEeehHHHHHH
Q 002174 747 FHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLE 824 (956)
Q Consensus 747 vH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~e 824 (956)
+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp EETTCSGGGEEECTTSCEEECCGGGEEETTC----------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred ccCcCCHHHEEECCCCCEEEEecceeeecCC----------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence 9999999999999999999999999986531 1124457799999999987 779999999999999999
Q ss_pred HHhCCCCCCCC
Q 002174 825 LLTGMQPISHG 835 (956)
Q Consensus 825 lltg~~pf~~~ 835 (956)
|++|+.||...
T Consensus 286 lltg~~Pf~~~ 296 (371)
T 3q60_A 286 VWCLFLPFGLV 296 (371)
T ss_dssp HHHSSCSTTBC
T ss_pred HHhCCCCCCCc
Confidence 99999999754
No 227
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.7e-36 Score=366.71 Aligned_cols=343 Identities=20% Similarity=0.233 Sum_probs=218.2
Q ss_pred ceeecCCCC----CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCC
Q 002174 69 GVLCFNTTM----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG 144 (956)
Q Consensus 69 gv~C~~~~~----~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (956)
.|.|..... .+...+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++
T Consensus 15 ~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~ 94 (606)
T 3vq2_A 15 TYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQS 94 (606)
T ss_dssp EEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCC
T ss_pred ceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccc
Confidence 466754321 1234567777777777777666677777777777777777776666667777777777777777776
Q ss_pred CCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccC-CCccccCCccccceeccccccccCCCCccc-
Q 002174 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPEL- 222 (956)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l- 222 (956)
..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..+..|
T Consensus 95 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 174 (606)
T 3vq2_A 95 FSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQ 174 (606)
T ss_dssp CCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTH
T ss_pred cChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhh
Confidence 667777777777777777776665555556666666666666666654 345556666666655555555443322111
Q ss_pred --------------------------------------------------------------------------------
Q 002174 223 -------------------------------------------------------------------------------- 222 (956)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (956)
T Consensus 175 ~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~ 254 (606)
T 3vq2_A 175 FLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSI 254 (606)
T ss_dssp HHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGG
T ss_pred hhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHH
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 002174 223 -------------------------------------------------------------------------------- 222 (956)
Q Consensus 223 -------------------------------------------------------------------------------- 222 (956)
T Consensus 255 ~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~ 334 (606)
T 3vq2_A 255 MEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLT 334 (606)
T ss_dssp GTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEE
T ss_pred hhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceee
Confidence
Q ss_pred ------------CCcchhhhhcccCCcCCCC------------------------CCchhccCCCCCcEEeccCC-----
Q 002174 223 ------------SELPKLLILQLDNNNFEGT------------------------TIPASYSNMSKLLKLSLRNC----- 261 (956)
Q Consensus 223 ------------~~l~~L~~L~Ls~N~l~~~------------------------~~p~~~~~l~~L~~L~Ls~N----- 261 (956)
..+++|++|+|++|.+++. .+|..+.++++|+.|++++|
T Consensus 335 l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~ 414 (606)
T 3vq2_A 335 LTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRV 414 (606)
T ss_dssp EESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEEST
T ss_pred ccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCc
Confidence 0112223333333332210 01223334444444444444
Q ss_pred --------------------CCccCCCC-CCCCCCccEEEccCCcCCCC-CCCCCCc-cccCEEEccCCcCCCCcchhcC
Q 002174 262 --------------------SLQGPMPD-LSRIPNLGYLDLSSNQLNGS-IPPGRLS-LNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 262 --------------------~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~-~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
.+++..+. +..+++|++|++++|.+++. +|..+.. .+|++|+|++|++++..|..|.
T Consensus 415 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 494 (606)
T 3vq2_A 415 TEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFD 494 (606)
T ss_dssp TTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT
T ss_pred cChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhc
Confidence 44443332 55556666666666666542 3443332 3788888888888888888888
Q ss_pred CCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCC-CCcEEEecCCcccccCCcccccCC
Q 002174 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIP-PNVTVRLRGNPFCLNTNAEQFCGS 396 (956)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~~-~l~~l~l~~Np~~c~c~~~~~~~~ 396 (956)
++++|+.|+|++|++++.+|..+..+. +|+.|||++|+|+.+|..+ .++ .+..+++++|||.|+|++.+|..|
T Consensus 495 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~-----~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~ 569 (606)
T 3vq2_A 495 TLHRLQLLNMSHNNLLFLDSSHYNQLY-----SLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQW 569 (606)
T ss_dssp TCTTCCEEECCSSCCSCEEGGGTTTCT-----TCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTT
T ss_pred ccccCCEEECCCCcCCCcCHHHccCCC-----cCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccHHHHHH
Confidence 888888888888888887787776554 4569999999999999887 466 599999999999999999999999
Q ss_pred CCCCCcccccCCCCCCCcccCc
Q 002174 397 HSDDDNEIDRSTNSTLDCRAQS 418 (956)
Q Consensus 397 ~~~~~~~~~~~~~~~~~c~~~~ 418 (956)
+......+. ....+.|..+.
T Consensus 570 l~~~~~~~~--~~~~~~C~~p~ 589 (606)
T 3vq2_A 570 VKEQKQFLV--NVEQMTCATPV 589 (606)
T ss_dssp TTTSSSSBS--SGGGCCCC---
T ss_pred HHcCccccc--CCccceeCCCh
Confidence 976543332 23456777643
No 228
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.2e-39 Score=353.93 Aligned_cols=259 Identities=24% Similarity=0.368 Sum_probs=189.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHh--cCCCceeeeecccccCC----cEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQM 696 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~ 696 (956)
.++|++.+.||+|+||.||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 368999999999999999999874 889999998753 33567788888887 78999999999997766 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhh--------hcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
+||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|
T Consensus 78 lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred EEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEee
Confidence 999999999999999654 4788889999999999999999 777 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccccC------CCCCcccEeehHHHHHHHHhC----------CCCC
Q 002174 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG----------MQPI 832 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlG~ll~elltg----------~~pf 832 (956)
||+++........ .........||+.|+|||++.+. .++.++|||||||++|||++| ..||
T Consensus 152 Fg~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 152 LGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp CCC-CCEETTTTE---ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred cCcceeccCCCcc---cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 9999765432211 01112334699999999999876 444689999999999999999 6666
Q ss_pred CCCchhHHHHHHHhhcccchhhccCC-CCCCC-----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002174 833 SHGKNIVREVNIAYQSSMMFSVIDGN-MGSYP-----SECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
......... .......+.... .+..+ .+++..+.+++.+||+.+|.+||++.++++.|+.+.
T Consensus 229 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~ 296 (303)
T 3gxj_A 229 YDLVPSDPS-----VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTCC-CCC-----CC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-C
T ss_pred cccCCCCcc-----HHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhh
Confidence 432110000 000000111111 12223 377789999999999999999999999999998764
No 229
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.5e-37 Score=335.11 Aligned_cols=200 Identities=28% Similarity=0.414 Sum_probs=167.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 367889999999999999999976 799999999865322 2345788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 99999999999997653 4889999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
. ......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||...
T Consensus 165 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 214 (276)
T 2h6d_A 165 E--------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDE 214 (276)
T ss_dssp --------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c--------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 1 1233468999999999988765 67999999999999999999999654
No 230
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=344.06 Aligned_cols=266 Identities=24% Similarity=0.377 Sum_probs=195.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeeccc--------cc
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYC--------DE 691 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~--------~~ 691 (956)
...+|++.+.||+|+||.||+|.+. +++.||||++........+.+.+|+.+++++. ||||+++++++ ..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 4568899999999999999999965 68999999987766666778999999999996 99999999988 33
Q ss_pred CCcEEEEEecCCCCCHHHHHhh-cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002174 692 EGEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 692 ~~~~~LV~E~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
....++||||++ |+|.+++.. .....+++..++.++.||+.||+|||+.+ ++|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCc
Confidence 446899999995 899998865 23456999999999999999999999875 459999999999999999999999999
Q ss_pred cccccCCCCCCCccc-----cceecccccCCCccccccc---ccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHH
Q 002174 771 LSRLAPVPDIEGIVP-----AHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 842 (956)
Q Consensus 771 la~~~~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~ 842 (956)
+++............ ........||+.|+|||++ .+..++.++|||||||++|||++|+.||.......
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--- 260 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR--- 260 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH---
Confidence 998765332110000 0111244589999999998 56678899999999999999999999996433211
Q ss_pred HHHhhcccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002174 843 NIAYQSSMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
+..... ...+...+..+.+++..||+.+|.+||++.++++.|+.+.....
T Consensus 261 -----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 -----------IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp ----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred -----------hhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 111111 11223344568899999999999999999999999998876543
No 231
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.3e-36 Score=340.33 Aligned_cols=266 Identities=23% Similarity=0.340 Sum_probs=211.0
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHh--cCCCceeeeecccccCC
Q 002174 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG 693 (956)
Q Consensus 616 ~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~ 693 (956)
........++|++.+.||+|+||+||+|+. +++.||||++... ..+.+.+|++++.. ++||||+++++++....
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~ 109 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN 109 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC
Confidence 334455678999999999999999999998 5899999998643 34577889998887 78999999999997765
Q ss_pred ----cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhh--------hcCCCCEeccCCCcccEEEcCC
Q 002174 694 ----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH--------TEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 694 ----~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.+
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~ 183 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKN 183 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTT
T ss_pred CccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCC
Confidence 889999999999999999753 4899999999999999999999 777 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC------CCCCcccEeehHHHHHHHHhC-------
Q 002174 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH------KLTDKSDVYSLGVVFLELLTG------- 828 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~------~~~~~sDVwSlG~ll~elltg------- 828 (956)
+.+||+|||+++........ .........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 184 ~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~ 260 (342)
T 1b6c_B 184 GTCCIADLGLAVRHDSATDT---IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 260 (342)
T ss_dssp SCEEECCCTTCEEEETTTTE---EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBC
T ss_pred CCEEEEECCCceeccccccc---cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcc
Confidence 99999999999765432210 01122345699999999999875 234689999999999999999
Q ss_pred ---CCCCCCCch---hHHHHHHHhhcccchhhccCCCCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002174 829 ---MQPISHGKN---IVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 829 ---~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..||..... ............ ...... ..+++..+.+++.+||+.+|.+||++.++++.|++
T Consensus 261 ~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~ 333 (342)
T 1b6c_B 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQ-------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 333 (342)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTTS-------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccCccccCcCcccHHHHHHHHHHH-------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 778864321 111111111110 111222 24778899999999999999999999999999999
Q ss_pred hHhh
Q 002174 898 IWNM 901 (956)
Q Consensus 898 ~~~~ 901 (956)
+.+.
T Consensus 334 i~~~ 337 (342)
T 1b6c_B 334 LSQQ 337 (342)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 8654
No 232
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.4e-38 Score=351.34 Aligned_cols=276 Identities=22% Similarity=0.370 Sum_probs=202.4
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc-----
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 694 (956)
.++|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 357888999999999999999975 69999999987532 2335678999999999999999999999876653
Q ss_pred -EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 695 -QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 695 -~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
.++||||++ ++|.+++.. .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 174 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 174 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred eEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeeccccc
Confidence 499999996 688887732 4889999999999999999999999 9999999999999999999999999997
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .......
T Consensus 175 ~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~i~~~---- 239 (353)
T 3coi_A 175 HADAE----------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKV---- 239 (353)
T ss_dssp C------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHH-HHHHHHH----
T ss_pred CCCCC----------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH----
Confidence 64321 233468999999999987 6789999999999999999999999976543221 1111100
Q ss_pred hhccCCCCCCChHHHHHHH----HHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCc
Q 002174 853 SVIDGNMGSYPSECVEKFI----KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~----~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
.+..+.+....+. ......+...+ |+.+. ...+...+...+++.+||..||++|||++
T Consensus 240 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 301 (353)
T 3coi_A 240 ------TGVPGTEFVQKLNDKAAKSYIQSLPQTP--RKDFT----------QLFPRASPQAADLLEKMLELDVDKRLTAA 301 (353)
T ss_dssp ------HCBCCHHHHTTCSCHHHHHHHHTSCBCS--SCCTT----------TTCTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred ------hCCCCHHHHHHHhhHHHHHHHHhCcCCC--CccHH----------HhcCCcCHHHHHHHHHHcCCCcccCCCHH
Confidence 0011111111000 00000111111 11111 11222334456899999999999999999
Q ss_pred CCCCCCcccCC
Q 002174 929 SMLKHPYVSSD 939 (956)
Q Consensus 929 e~L~HP~f~~~ 939 (956)
|+|+||||...
T Consensus 302 e~l~hp~f~~~ 312 (353)
T 3coi_A 302 QALTHPFFEPF 312 (353)
T ss_dssp HHHTSGGGTTT
T ss_pred HHhcCcchhhc
Confidence 99999999753
No 233
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.9e-37 Score=356.62 Aligned_cols=268 Identities=21% Similarity=0.293 Sum_probs=210.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC-CceeeeecccccCCcEEEEEe
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~LV~E 700 (956)
.++|++.++||+|+||.||+|.+ .+++.||||++...... .++.+|+++++.++| ++|..+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999996 46999999987754332 357889999999986 556566666677888999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE---cCCCcEEEEeeccccccCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL---DHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl---~~~~~~kl~DfGla~~~~~ 777 (956)
|+ +++|.+++... ...+++..++.|+.||+.||+|||+++ ||||||||+|||+ +.++.+||+|||+++....
T Consensus 84 ~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~ 158 (483)
T 3sv0_A 84 LL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158 (483)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred CC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccC
Confidence 99 99999999754 345899999999999999999999999 9999999999999 6889999999999987654
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch--hHHHHHHHhhcccchhhc
Q 002174 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN--IVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~--~~~~~~~~~~~~~~~~~~ 855 (956)
.......+........||..|+|||++.+..++.++|||||||++|||++|+.||..... .......... ......+
T Consensus 159 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~-~~~~~~~ 237 (483)
T 3sv0_A 159 TSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISE-KKVATSI 237 (483)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHH-HHHHSCH
T ss_pred CccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhh-ccccccH
Confidence 332211112223356799999999999999999999999999999999999999975332 1111111110 0000000
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002174 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
...+..++.++.+++..||+.+|++||++.++++.|+.+....
T Consensus 238 ----~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 238 ----EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp ----HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred ----HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 0011234578899999999999999999999999999887654
No 234
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=343.48 Aligned_cols=212 Identities=29% Similarity=0.440 Sum_probs=173.5
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeeccccc
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 691 (956)
+++.++....++|++.+.||+|+||.||+|... +++.||||++..... ..+.+.+|+++++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 344445556789999999999999999999974 789999999875432 345788999999999 79999999999865
Q ss_pred ------CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEE
Q 002174 692 ------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (956)
Q Consensus 692 ------~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 765 (956)
.+..++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+|
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEE
Confidence 468899999999999999998765556889999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccc-----cCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
|+|||++....... .......||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 170 l~Dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 238 (326)
T 2x7f_A 170 LVDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238 (326)
T ss_dssp ECCCTTTC--------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred EeeCcCceecCcCc-------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 99999997653211 1123446899999999997 5678899999999999999999999996544
No 235
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.2e-37 Score=335.07 Aligned_cols=203 Identities=25% Similarity=0.352 Sum_probs=160.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCCh-hhH-HHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL-QGE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||+||+|.. .+++.||||++..... ... +.+.++...++.++||||+++++++.+++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 357899999999999999999996 4789999999875432 222 3344455568888999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
|||++ |+|.+++.. .....+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99996 699888764 2345699999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccccccc----ccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (290)
T 3fme_A 161 VDDV--------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 217 (290)
T ss_dssp -----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred cccc--------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC
Confidence 4321 12334689999999996 45678899999999999999999999997533
No 236
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.8e-37 Score=380.80 Aligned_cols=300 Identities=33% Similarity=0.507 Sum_probs=228.7
Q ss_pred cceeeEEEeCCCCccccCCcCccCCC-CCCEEEccCCCCcccCCccccC--CcccchhhccCCCCCCCCCcccCCCcccc
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLS-YLTILDFMWNKISGSIPKEIGN--IKSLELLLLNGNELTGSLPEELGYLPKLD 157 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 157 (956)
..+++.|+|++|.+++.+|..+.+++ +|++|+|++|++++.+|..+.. +++|++|+|++|.+++.+|..+.++++|+
T Consensus 342 l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 421 (768)
T 3rgz_A 342 MRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELV 421 (768)
T ss_dssp CTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCC
T ss_pred CCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCC
Confidence 35678888888888888888887776 7888888888887777777766 67788888888888777777788888888
Q ss_pred ceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCc
Q 002174 158 RIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNN 237 (956)
Q Consensus 158 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 237 (956)
+|+|++|++++.+|..|.++++|+.|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+..+++|++|+|++|+
T Consensus 422 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 501 (768)
T 3rgz_A 422 SLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501 (768)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCc
Confidence 88888888877777778888888888888888877777777777888888888888887777777777888888888888
Q ss_pred CCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc--------------------
Q 002174 238 FEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-------------------- 296 (956)
Q Consensus 238 l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------------------- 296 (956)
+++ .+|.+++++++|+.|+|++|++++..| .+..+++|+.|++++|+++|.+|...+.
T Consensus 502 l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (768)
T 3rgz_A 502 LTG-EIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKN 580 (768)
T ss_dssp CCS-CCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEEC
T ss_pred cCC-cCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccc
Confidence 776 577777778888888888888876555 4777777888888888777777653211
Q ss_pred ---------------------------------------------------cccCEEEccCCcCCCCcchhcCCCCcCCe
Q 002174 297 ---------------------------------------------------LNITTIKLSNNKLTGTIPSNFSGLPRLQR 325 (956)
Q Consensus 297 ---------------------------------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 325 (956)
.+|+.|||++|+++|.+|..|+++++|+.
T Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~ 660 (768)
T 3rgz_A 581 DGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFI 660 (768)
T ss_dssp CSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCE
T ss_pred ccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCE
Confidence 24677888888888888888888888888
Q ss_pred EecccccCCCcCChhhhhhccCCCCcceEEEccCCCCC-CCCCCC-CCCCCcEEEecCCcccc
Q 002174 326 LFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT-NISGSF-NIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 326 L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~-~l~~~~-~~~~l~~l~l~~Np~~c 386 (956)
|+|++|+++|.+|..+..+..| +.|||++|+|+ .+|..+ .++.+..|++++|++..
T Consensus 661 L~Ls~N~l~g~ip~~l~~L~~L-----~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 661 LNLGHNDISGSIPDEVGDLRGL-----NILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTC-----CEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred EeCcCCccCCCCChHHhCCCCC-----CEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 8888888888888777765544 47888888877 455555 47777778887777654
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.9e-37 Score=336.19 Aligned_cols=260 Identities=24% Similarity=0.384 Sum_probs=201.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC--CCc--EEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|++.+.||+|+||+||+|.+. +++ .||||+++... ....+.+.+|++++++++||||+++++++..+. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467889999999999999999853 333 68999887532 234568899999999999999999999998754 8
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... ..+++..+..++.|+++||.|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 89999999999999997642 35889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
..... .........+|..|+|||++.+..++.++||||||+++|||++ |+.||....... .......
T Consensus 172 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-~~~~~~~------- 239 (291)
T 1u46_A 172 PQNDD----HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDK------- 239 (291)
T ss_dssp CC-CC----EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHT-------
T ss_pred ccccc----chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH-HHHHHHc-------
Confidence 43321 0112233457788999999999889999999999999999999 999997554321 1111110
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.......+..++..+.+++.+|+..+|.+||++.++++.|++...
T Consensus 240 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 240 -EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp -SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred -cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 111223455677889999999999999999999999999987643
No 238
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.2e-37 Score=343.39 Aligned_cols=203 Identities=26% Similarity=0.396 Sum_probs=171.0
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEe-CCCcEEEEEEecCCC-hhhHHHHHHHHHH-HHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||+||+|.. .+|+.||||++.... .....++..|..+ ++.++||||+++++++..++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 456788899999999999999996 479999999987543 2334556666665 7788999999999999999999999
Q ss_pred EecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
|||++ |+|.+++... ....+++..++.++.||++||+|||++ + |+||||||+||+++.++.+||+|||+++..
T Consensus 129 ~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCS-EEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhh-CcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 99996 5999988642 345699999999999999999999987 8 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCccccccccc----CCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 205 ~~--------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~ 261 (340)
T 3an0_A 205 VD--------SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG 261 (340)
T ss_dssp SC--------HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS
T ss_pred cc--------ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc
Confidence 32 112233469999999999753 478899999999999999999999997543
No 239
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=334.98 Aligned_cols=202 Identities=29% Similarity=0.454 Sum_probs=172.1
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
..++|++.+.||+|+||.||+|... +|+.||||.+.... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 4578999999999999999999975 58999999987543 23578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM- 179 (314)
T ss_dssp CCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTB-
T ss_pred cCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhc-
Confidence 99999999999643 345899999999999999999999999 9999999999999999999999999997654221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.......|++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 180 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 229 (314)
T 3com_A 180 ------AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH 229 (314)
T ss_dssp ------SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ------cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 11234468999999999999999999999999999999999999997544
No 240
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2e-37 Score=340.61 Aligned_cols=277 Identities=24% Similarity=0.354 Sum_probs=187.7
Q ss_pred HHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002174 619 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 619 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
+....++|++.+.||+|+||.||+|... +++.||||++.... ....+++.+|++++++++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3445678999999999999999999964 68999999887543 233467889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhh------cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002174 697 LVYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
+||||+++++|.+++.. .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEecc
Confidence 99999999999999864 12346899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002174 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
++......... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||............
T Consensus 167 ~~~~~~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~----- 239 (303)
T 2vwi_A 167 VSAFLATGGDI--TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT----- 239 (303)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHH-----
T ss_pred chheeccCCCc--cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHH-----
Confidence 99765432110 01122234568999999999976 56899999999999999999999999754432211110
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcC
Q 002174 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
............ .++. ..........+++.+||..||++|||++|
T Consensus 240 -----~~~~~~~~~~~~-------------~~~~-----------------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ 284 (303)
T 2vwi_A 240 -----LQNDPPSLETGV-------------QDKE-----------------MLKKYGKSFRKMISLCLQKDPEKRPTAAE 284 (303)
T ss_dssp -----HTSSCCCTTC------------------C-----------------CCCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred -----hccCCCcccccc-------------ccch-----------------hhhhhhHHHHHHHHHHccCChhhCcCHHH
Confidence 000000000000 0000 01111222336777888899999999999
Q ss_pred CCCCCcccCCC
Q 002174 930 MLKHPYVSSDV 940 (956)
Q Consensus 930 ~L~HP~f~~~~ 940 (956)
+++||||....
T Consensus 285 ll~h~~~~~~~ 295 (303)
T 2vwi_A 285 LLRHKFFQKAK 295 (303)
T ss_dssp HHTSTTC----
T ss_pred HhhChhhhcCC
Confidence 99999997543
No 241
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.8e-37 Score=368.81 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=212.9
Q ss_pred HHHHHhcCCCCCCeeeeeCCeeEEEEEeC----CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002174 618 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 618 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
+.....++|++.+.||+|+||+||+|.+. .+..||||.++... ....+.+.+|+.++++++||||+++++++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34445678999999999999999999864 25689999987543 333568999999999999999999999985 4
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002174 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+|||++.++.+||+|||++
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a 538 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLS 538 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCC
Confidence 5789999999999999999764 345889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccc
Q 002174 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
+...... ........+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ...
T Consensus 539 ~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~-~~~-------- 603 (656)
T 2j0j_A 539 RYMEDST------YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND-VIG-------- 603 (656)
T ss_dssp CSCCC----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHH--------
T ss_pred eecCCCc------ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHH-HHH--------
Confidence 8764322 111223456789999999999999999999999999999997 999997544321 111
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+..+.....+..++..+.+++.+||..+|.+||++.++++.|+.+.+
T Consensus 604 -~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 604 -RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp -HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 112223344566778899999999999999999999999999998754
No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=4e-37 Score=365.13 Aligned_cols=203 Identities=28% Similarity=0.423 Sum_probs=174.6
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeeccccc------CCcE
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQ 695 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~~ 695 (956)
++|++.+.||+|+||+||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 68999999999999999999964 6899999998764 33445679999999999999999999998755 6778
Q ss_pred EEEEecCCCCCHHHHHhhcC-CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc---EEEEeecc
Q 002174 696 MLVYEFMSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT---AKVADFGL 771 (956)
Q Consensus 696 ~LV~E~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~---~kl~DfGl 771 (956)
++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997643 236889999999999999999999999 999999999999997664 99999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCch
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~ 837 (956)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 171 a~~~~~~~--------~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~ 228 (676)
T 3qa8_A 171 AKELDQGE--------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ 228 (676)
T ss_dssp CCBTTSCC--------CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred cccccccc--------ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence 98764322 12345689999999999999999999999999999999999999976544
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.7e-37 Score=353.69 Aligned_cols=201 Identities=25% Similarity=0.318 Sum_probs=157.3
Q ss_pred CCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCC
Q 002174 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~E~~~ 703 (956)
.|.+.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+++..++||||++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 44556789999999998776668999999998653 234678899999886 89999999999999999999999995
Q ss_pred CCCHHHHHhhcCCCC-----chhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-------------CcEE
Q 002174 704 NGTLRDQLSAKSKEP-----LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------------FTAK 765 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-------------~~~k 765 (956)
|+|.+++....... ..+..++.++.||+.||+|||+.+ |+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 79999997653221 133456789999999999999999 9999999999999754 4899
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCccccccccc-------CCCCCcccEeehHHHHHHHHh-CCCCCCCC
Q 002174 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwSlG~ll~ellt-g~~pf~~~ 835 (956)
|+|||+++........ .........||+.|+|||++.+ ..++.++|||||||++|||++ |+.||...
T Consensus 169 L~DFG~a~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~ 243 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSS---FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243 (434)
T ss_dssp ECCCTTCEECCC-----------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCST
T ss_pred EcccccceecCCCCcc---ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCc
Confidence 9999999876532210 0111234579999999999976 678999999999999999999 99999654
No 244
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=8.5e-37 Score=337.48 Aligned_cols=211 Identities=24% Similarity=0.340 Sum_probs=172.1
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcC--CCceeeeeccc
Q 002174 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH--HRNLVSLVGYC 689 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~ 689 (956)
+.++.+....++|++.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++++++ |+||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 44444555667899999999999999999998889999999986532 334568899999999997 59999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002174 690 DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 690 ~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
...+..++||| +.+++|.+++.... .+++..++.++.|+++||.|||+.+ |+||||||+||++++ +.+||+||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Df 170 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDF 170 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCC
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeec
Confidence 99999999999 55899999997643 5888999999999999999999999 999999999999975 89999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCccccccccc-----------CCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----------HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
|+++....... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||....
T Consensus 171 g~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 243 (313)
T 3cek_A 171 GIANQMQPDTT-----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 243 (313)
T ss_dssp SSSCC-------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred cccccccCccc-----cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence 99986543221 112234568999999999875 467889999999999999999999997543
No 245
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.9e-36 Score=363.66 Aligned_cols=359 Identities=18% Similarity=0.241 Sum_probs=270.9
Q ss_pred ceeecCCC---CC-CCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCC
Q 002174 69 GVLCFNTT---MD-DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG 144 (956)
Q Consensus 69 gv~C~~~~---~~-~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (956)
.|.|.+.. ++ +.+..++.|+|++|+|++..+..|.++++|++|+|++|+|++..|.+|.++++|++|+|++|+|++
T Consensus 35 ~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~ 114 (635)
T 4g8a_A 35 TYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS 114 (635)
T ss_dssp EEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred EEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCC
Confidence 46786532 22 334589999999999998888899999999999999999998888889999999999999999997
Q ss_pred CCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccC-CCccccCCccccceeccccccccCCCCcccC
Q 002174 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPELS 223 (956)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~ 223 (956)
..+..|.+|++|++|+|++|+|++..+..|+++++|++|+|++|.+++ ..|..++.+++|++|+|++|+|++..+..|.
T Consensus 115 l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 115 LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp ECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred CCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 777889999999999999999998888889999999999999999975 4678889999999999999988755443322
Q ss_pred Cc------------------------------------------------------------------------------
Q 002174 224 EL------------------------------------------------------------------------------ 225 (956)
Q Consensus 224 ~l------------------------------------------------------------------------------ 225 (956)
.+
T Consensus 195 ~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~ 274 (635)
T 4g8a_A 195 VLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSA 274 (635)
T ss_dssp HHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTT
T ss_pred chhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccc
Confidence 11
Q ss_pred --------------------------------------------------------------------------------
Q 002174 226 -------------------------------------------------------------------------------- 225 (956)
Q Consensus 226 -------------------------------------------------------------------------------- 225 (956)
T Consensus 275 ~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l 354 (635)
T 4g8a_A 275 LEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRL 354 (635)
T ss_dssp TGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEE
T ss_pred cccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhc
Confidence
Q ss_pred ----------------chhhhhcccCCcCCCC------------------------------------------------
Q 002174 226 ----------------PKLLILQLDNNNFEGT------------------------------------------------ 241 (956)
Q Consensus 226 ----------------~~L~~L~Ls~N~l~~~------------------------------------------------ 241 (956)
++|+.|++++|.+...
T Consensus 355 ~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~ 434 (635)
T 4g8a_A 355 TFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQ 434 (635)
T ss_dssp EEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEES
T ss_pred ccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccc
Confidence 1222222222222100
Q ss_pred -CCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCC-CCCCCCCc-cccCEEEccCCcCCCCcchhc
Q 002174 242 -TIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG-SIPPGRLS-LNITTIKLSNNKLTGTIPSNF 317 (956)
Q Consensus 242 -~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~ 317 (956)
.....|.++++++.++++.|.+.+..+. +..+++|+.|+|++|.+.. .+|..+.. .+|++|+|++|+|++..|..|
T Consensus 435 ~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f 514 (635)
T 4g8a_A 435 MSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAF 514 (635)
T ss_dssp TTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTT
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHH
Confidence 0011233344455555555666555443 5667788888888887543 34444433 389999999999999999999
Q ss_pred CCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CC-CCCcEEEecCCcccccCCccccc
Q 002174 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NI-PPNVTVRLRGNPFCLNTNAEQFC 394 (956)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~-~~l~~l~l~~Np~~c~c~~~~~~ 394 (956)
.++++|+.|+|++|+|++..|..|..+.+ |+.|||++|+|++++.. + .+ .+++.|+|++|||.|||++.+|.
T Consensus 515 ~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~-----L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~ 589 (635)
T 4g8a_A 515 NSLSSLQVLNMSHNNFFSLDTFPYKCLNS-----LQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFL 589 (635)
T ss_dssp TTCTTCCEEECTTSCCCBCCCGGGTTCTT-----CCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHH
T ss_pred cCCCCCCEEECCCCcCCCCChhHHhCCCC-----CCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHH
Confidence 99999999999999999888888876554 56999999999998765 3 45 57999999999999999999999
Q ss_pred CCCCCCCcccccCCCCCCCcccCcCCCCCccCCCCCCcceeec
Q 002174 395 GSHSDDDNEIDRSTNSTLDCRAQSCPTDYEYSPTSPIRCFCAA 437 (956)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~~c~~ 437 (956)
.|++.....+. +...+.|..|. .....|.......|..
T Consensus 590 ~wl~~~~~~~~--~~~~~~C~~P~---~~~g~~l~~~~~~C~~ 627 (635)
T 4g8a_A 590 QWIKDQRQLLV--EVERMECATPS---DKQGMPVLSLNITCQM 627 (635)
T ss_dssp HHHHHTTTTBS--CGGGCBBCSST---TTTTCBGGGCCCCC--
T ss_pred HHHHhCCCccC--CCCCceeCCch---HHCCCEeeeeccCCCC
Confidence 99975544332 33457888743 4444443333446654
No 246
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.2e-36 Score=329.02 Aligned_cols=204 Identities=25% Similarity=0.400 Sum_probs=164.0
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc----------
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE---------- 691 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~---------- 691 (956)
.++|++.+.||+|+||.||+|... +++.||||++.. .....+.+.+|++++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999964 799999999864 33345678999999999999999999998744
Q ss_pred ---CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002174 692 ---EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 692 ---~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
.+..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++.++.+||+|
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECC
T ss_pred cccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEee
Confidence 45789999999999999999764 345788899999999999999999999 99999999999999999999999
Q ss_pred eccccccCCCCCCCc-------cccceecccccCCCcccccccccC-CCCCcccEeehHHHHHHHHhCCCCCCC
Q 002174 769 FGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 769 fGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
||+++.......... ..........||+.|+|||++.+. .++.++|||||||++|||++ ||..
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~ 230 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFST 230 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCC
Confidence 999986542210000 001122345689999999999864 68999999999999999998 5543
No 247
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=348.46 Aligned_cols=201 Identities=25% Similarity=0.364 Sum_probs=159.9
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEe
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~E 700 (956)
...+|++.+.||+|+||+||.....+++.||||++...... .+.+|+++++++ +||||+++++++.+.+..++|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 34568888999999999976555568899999998754332 356799999999 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-----CCcEEEEeecccccc
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLA 775 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-----~~~~kl~DfGla~~~ 775 (956)
|++ |+|.+++..... ...+..++.++.||++||+|||+.+ |+||||||+|||++. ...+||+|||+|+..
T Consensus 99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 995 699999976532 3455567789999999999999999 999999999999943 346889999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccc---cCCCCCcccEeehHHHHHHHHh-CCCCCCC
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLT-GMQPISH 834 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwSlG~ll~ellt-g~~pf~~ 834 (956)
..... .........||+.|+|||++. ...++.++|||||||++|||++ |..||..
T Consensus 174 ~~~~~----~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~ 232 (432)
T 3p23_A 174 AVGRH----SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232 (432)
T ss_dssp ----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBS
T ss_pred cCCCc----ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcch
Confidence 43211 112234457999999999997 4567889999999999999999 8888854
No 248
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.7e-36 Score=333.02 Aligned_cols=250 Identities=26% Similarity=0.409 Sum_probs=172.1
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHH-HHHhcCCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++.+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 468889999999999999999975 689999999876432 33455666666 777789999999999999999999999
Q ss_pred ecCCCCCHHHHHhh---cCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002174 700 EFMSNGTLRDQLSA---KSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 700 E~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
||++ |+|.+++.. .....+++..+..++.|+++||.|||+. + |+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 9996 588887753 2345689999999999999999999998 8 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccccccc----ccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYF----LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
.... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||.......+. +
T Consensus 177 ~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---------~ 239 (327)
T 3aln_A 177 VDSI--------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ---------L 239 (327)
T ss_dssp -------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------------
T ss_pred cccc--------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH---------H
Confidence 4221 12234689999999998 4567899999999999999999999999754321111 1
Q ss_pred hhhccCCCCCC----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 852 FSVIDGNMGSY----PSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 852 ~~~~~~~~~~~----~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
..+..+..... ...++..+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 240 TQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 11222211111 1234455566666666666666666555543
No 249
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=332.37 Aligned_cols=202 Identities=27% Similarity=0.408 Sum_probs=164.5
Q ss_pred HHHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh------hHHHHHHHHHHHHhc----CCCceeeeec
Q 002174 619 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRL----HHRNLVSLVG 687 (956)
Q Consensus 619 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~nIv~l~~ 687 (956)
.....++|++.+.||+|+||.||+|... +++.||||++...... ....+.+|+++++++ +|+||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3445678999999999999999999864 6899999999754332 223456799999998 8999999999
Q ss_pred ccccCCcEEEEEec-CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEE
Q 002174 688 YCDEEGEQMLVYEF-MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAK 765 (956)
Q Consensus 688 ~~~~~~~~~LV~E~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~k 765 (956)
++...+..++|||| +++++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++ .++.+|
T Consensus 106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 106 WFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEE
T ss_pred EEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEE
Confidence 99999999999999 78999999997643 4899999999999999999999999 99999999999999 889999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCC-CcccEeehHHHHHHHHhCCCCCCC
Q 002174 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
|+|||+++...... .....|+..|+|||++.+..+. .++|||||||++|||++|+.||..
T Consensus 181 l~dfg~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 241 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241 (312)
T ss_dssp ECCCSSCEECCSSC---------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred EEEcchhhhcccCc---------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCC
Confidence 99999998764321 2344589999999999877664 489999999999999999999964
No 250
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=6.4e-36 Score=361.64 Aligned_cols=327 Identities=19% Similarity=0.249 Sum_probs=289.0
Q ss_pred eeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeec
Q 002174 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (956)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (956)
.++.|++++|.+++..+..|+++++|++|+|++|+++ .+|..+.++++|++|+|++|++++..|..+..+++|++|+++
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 7999999999999888888999999999999999999 789999999999999999999998889999999999999999
Q ss_pred cccccCCCCc-cccccccCCeeecccCcccCCC--ccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCC
Q 002174 163 QNYISGSLPK-SFANLNKTRHFHMNNNSISGQI--PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 163 ~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (956)
+|.+.+.+|. .+.++++|++|++++|.+++.. +..+..+++|++|++++|++++..|..|..+++|++|+|++|+++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 9999977765 4999999999999999999776 788999999999999999999999999999999999999999998
Q ss_pred CCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCC-CCC--CCC-ccccCEEEccCCcCCCCcc
Q 002174 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGS-IPP--GRL-SLNITTIKLSNNKLTGTIP 314 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~-~p~--~~~-~~~L~~L~Ls~N~l~~~~p 314 (956)
+...+..+.++++|+.|++++|.+++..+. +..+++|++|++++|++++. ++. .+. ..+|+.|+|++|++++..|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 744455699999999999999999997765 88999999999999999863 222 222 3489999999999999999
Q ss_pred hhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCccc
Q 002174 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQ 392 (956)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~~~~l~~l~l~~Np~~c~c~~~~ 392 (956)
..|.++++|+.|+|++|++++.+|..+..+. .| .|+|++|++++++... .++.++.+++++|||.|+|+..+
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-----~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~ 567 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLK-----GI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIY 567 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCC-----SC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHH
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccc-----cc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHH
Confidence 9999999999999999999999998887644 45 7999999999987663 48899999999999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCCcccCc
Q 002174 393 FCGSHSDDDNEIDRSTNSTLDCRAQS 418 (956)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~c~~~~ 418 (956)
|..|+......+. ....+.|..|.
T Consensus 568 ~~~w~~~~~~~~~--~~~~~~C~~p~ 591 (606)
T 3t6q_A 568 FLEWYKENMQKLE--DTEDTLCENPP 591 (606)
T ss_dssp HHHHHHHCGGGEE--CGGGCBEEESG
T ss_pred HHHHHHhCccccc--CCCCCeeCCch
Confidence 9999976543332 23346677643
No 251
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.7e-37 Score=339.69 Aligned_cols=268 Identities=22% Similarity=0.314 Sum_probs=205.8
Q ss_pred cHHHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002174 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 615 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
..+++....++|++.+.||+|+||.||+|.+.+ .||+|+++.... ...+.+.+|++++++++|+||+++++++.+.
T Consensus 24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 334555567889999999999999999999754 499998875322 2234677899999999999999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002174 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
+..++||||+++++|.+++... ...+++..++.++.|+++||+|||+++ |+||||||+||+++ ++.+||+|||++
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~ 176 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLF 176 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCC
T ss_pred CceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCc
Confidence 9999999999999999999654 346899999999999999999999999 99999999999998 679999999998
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc---------CCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHH
Q 002174 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 843 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~ 843 (956)
+........ ..........|++.|+|||++.+ ..++.++|||||||++|||++|+.||...........
T Consensus 177 ~~~~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 254 (319)
T 2y4i_B 177 SISGVLQAG--RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQ 254 (319)
T ss_dssp C------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHH
T ss_pred ccccccccc--ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 765322111 01122234458999999999875 3578899999999999999999999976543221111
Q ss_pred HHhhcccchhhccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002174 844 IAYQSSMMFSVIDGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
. ..+.... .+..++..+.+++..||..+|.+||++.++++.|+.+...
T Consensus 255 ~----------~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 255 M----------GTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp H----------HTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred h----------ccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 1 1111111 1223556789999999999999999999999999877543
No 252
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=7.1e-36 Score=333.45 Aligned_cols=197 Identities=23% Similarity=0.373 Sum_probs=148.3
Q ss_pred HhcCCCCCC-eeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHH-HHHHhcCCCceeeeeccccc----CCc
Q 002174 622 ATNNFNSST-QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEI-QFLSRLHHRNLVSLVGYCDE----EGE 694 (956)
Q Consensus 622 ~~~~~~~~~-~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~-~~l~~l~h~nIv~l~~~~~~----~~~ 694 (956)
..++|.+.+ .||+|+||+||+|... +++.||||++.... ...+|+ ..++.++||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 356888854 6999999999999976 69999999987531 222233 34566799999999999865 445
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeecc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGL 771 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGl 771 (956)
.++||||+++|+|.+++.......+++..++.++.|+++||+|||+++ |+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence 899999999999999998776667999999999999999999999999 999999999999976 45699999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 178 ~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 232 (336)
T 3fhr_A 178 AKETTQN---------ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN 232 (336)
T ss_dssp CEEC-------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred ceecccc---------ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 9865321 123456899999999998888999999999999999999999999643
No 253
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.7e-35 Score=322.84 Aligned_cols=201 Identities=28% Similarity=0.428 Sum_probs=173.6
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3568999999999999999999975 68999999986432 23456889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC---CcEEEEeecccccc
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~DfGla~~~ 775 (956)
|||+++++|.+++.... .+++..++.++.|++.||.|||+.+ |+||||||+||+++.+ +.+||+|||++...
T Consensus 100 ~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~ 174 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (287)
T ss_dssp ECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTB
T ss_pred EEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceee
Confidence 99999999999887643 4889999999999999999999999 9999999999999754 47999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCc
Q 002174 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~ 836 (956)
.... ......|++.|+|||.+.+ .++.++||||||+++|||++|+.||....
T Consensus 175 ~~~~--------~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (287)
T 2wei_A 175 QQNT--------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN 226 (287)
T ss_dssp CCCS--------SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cCCC--------ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC
Confidence 4321 1223458899999999876 48999999999999999999999997543
No 254
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.9e-36 Score=334.33 Aligned_cols=201 Identities=25% Similarity=0.422 Sum_probs=171.9
Q ss_pred HHHhcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh------hHHHHHHHHHHHHhcC--CCceeeeecccc
Q 002174 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ------GEKEFLTEIQFLSRLH--HRNLVSLVGYCD 690 (956)
Q Consensus 620 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~nIv~l~~~~~ 690 (956)
....++|++.+.||+|+||.||+|... +++.||||++...... ..+.+.+|++++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 334678999999999999999999964 7899999998753221 2245678999999996 599999999999
Q ss_pred cCCcEEEEEecCCC-CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEEEEe
Q 002174 691 EEGEQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVAD 768 (956)
Q Consensus 691 ~~~~~~LV~E~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~D 768 (956)
.++..++|||++.+ ++|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++ +++.+||+|
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEee
Confidence 99999999999976 8999999764 35889999999999999999999999 99999999999999 789999999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccccCCC-CCcccEeehHHHHHHHHhCCCCCCC
Q 002174 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwSlG~ll~elltg~~pf~~ 834 (956)
||+++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||..
T Consensus 194 fg~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 251 (320)
T 3a99_A 194 FGSGALLKDTV---------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251 (320)
T ss_dssp CTTCEECCSSC---------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred Ccccccccccc---------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCC
Confidence 99998764221 223458999999999987765 6789999999999999999999964
No 255
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=331.20 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=172.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh-hH-HHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GE-KEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~-~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.++|++.+.||+|+||.||+|... +|+.||||++...... .. +.+.++..+++.++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999975 6899999998764332 22 33444555788889999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||+ ++.+..+.... ...+++..++.++.|+++||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 56666655432 34689999999999999999999995 8 999999999999999999999999999765322
Q ss_pred CCCCccccceecccccCCCcccccccc-----cCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...............
T Consensus 179 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~------ 244 (318)
T 2dyl_A 179 K--------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQ------ 244 (318)
T ss_dssp ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHH------
T ss_pred c--------cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhc------
Confidence 1 123346899999999994 456889999999999999999999999764433222221111
Q ss_pred hccCCCCCC--ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 854 VIDGNMGSY--PSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 854 ~~~~~~~~~--~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
+..... ...++..+.+++.+||+.+|.+||++.++++
T Consensus 245 ---~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 245 ---EEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ---SCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---cCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 111111 1123345555666666666666655555553
No 256
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.3e-35 Score=348.35 Aligned_cols=307 Identities=21% Similarity=0.230 Sum_probs=238.8
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|||++|+++ .+|.. .+++|++|+
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 357888888888888777778888888888888888888777888888888888888888888 56655 788888888
Q ss_pred eccccccCC-CCccccccccCCeeecccCcccCC-------------------------CccccCCcc------------
Q 002174 161 IDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQ-------------------------IPPELSRLP------------ 202 (956)
Q Consensus 161 Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~-------------------------~p~~l~~l~------------ 202 (956)
|++|++++. +|..|+++++|++|+|++|++++. .|..+..+.
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~ 207 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNS 207 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSS
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCcc
Confidence 888888763 467888888888888888876532 222222211
Q ss_pred ---------------------------------------------------------------------ccceecccccc
Q 002174 203 ---------------------------------------------------------------------SLVHMLLDNNN 213 (956)
Q Consensus 203 ---------------------------------------------------------------------~L~~L~L~~N~ 213 (956)
+|++|++++|+
T Consensus 208 ~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 287 (562)
T 3a79_B 208 LFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLT 287 (562)
T ss_dssp CCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEE
T ss_pred chhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccE
Confidence 56666666667
Q ss_pred ccCCCCccc-----------------------------------------------------CCcchhhhhcccCCcCCC
Q 002174 214 LTGYLPPEL-----------------------------------------------------SELPKLLILQLDNNNFEG 240 (956)
Q Consensus 214 l~~~~p~~l-----------------------------------------------------~~l~~L~~L~Ls~N~l~~ 240 (956)
++|.+|..+ ..+++|++|+|++|++++
T Consensus 288 l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n~l~~ 367 (562)
T 3a79_B 288 ITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQNVFTD 367 (562)
T ss_dssp ECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCT
T ss_pred eeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCCcccc
Confidence 766666554 566788888888888886
Q ss_pred CCCchhccCCCCCcEEeccCCCCccCCC---CCCCCCCccEEEccCCcCCCCCCCCCCc--cccCEEEccCCcCCCCcch
Q 002174 241 TTIPASYSNMSKLLKLSLRNCSLQGPMP---DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPS 315 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~ 315 (956)
..|..+.++++|+.|+|++|++++.++ .+..+++|++|++++|++++.+|...+. .+|++|+|++|++++..|.
T Consensus 368 -~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 368 -SVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp -TTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred -chhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 577888888888888888888887542 4788888888888888888767765332 3788888988888877666
Q ss_pred hcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCCcccc
Q 002174 316 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQF 393 (956)
Q Consensus 316 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~~~~~ 393 (956)
.+. ++|+.|+|++|+|+ .+|..++.+ ++|+.|+|++|+|+++|.. + .++.++.+++++|||.|+|++.+|
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l-----~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 518 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHL-----QALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRY 518 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSS-----CCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCC-----CCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHH
Confidence 554 68999999999988 677766544 4567999999999999987 5 589999999999999999999998
Q ss_pred cC-CCCC
Q 002174 394 CG-SHSD 399 (956)
Q Consensus 394 ~~-~~~~ 399 (956)
.. |...
T Consensus 519 ~~~~~~~ 525 (562)
T 3a79_B 519 LSEWINK 525 (562)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 65 6543
No 257
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=350.68 Aligned_cols=182 Identities=20% Similarity=0.318 Sum_probs=136.2
Q ss_pred CCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCC---CCCCCCCCccEEEccCCcCCCCCCCCCC--cc
Q 002174 223 SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM---PDLSRIPNLGYLDLSSNQLNGSIPPGRL--SL 297 (956)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~ 297 (956)
..+++|++|+|++|++++ ..|..+.++++|+.|+|++|++++.. ..+..+++|++|++++|.+++.+|...+ ..
T Consensus 321 ~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~ 399 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTD-TVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTK 399 (520)
T ss_dssp SSCCCCCEEECCSSCCCT-TTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCT
T ss_pred hhCCcccEEEeECCccCh-hhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCc
Confidence 456677777777777775 46677777778888888888777532 2367777888888888888765665422 23
Q ss_pred ccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCc
Q 002174 298 NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNV 375 (956)
Q Consensus 298 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~ 375 (956)
+|++|+|++|++++..|..+. ++|+.|+|++|+++ .+|..+..+ ++|+.|+|++|+|+.+|.. + .++.+.
T Consensus 400 ~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l-----~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 471 (520)
T 2z7x_B 400 SLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKL-----EALQELNVASNQLKSVPDGIFDRLTSLQ 471 (520)
T ss_dssp TCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGC-----TTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcC-----CCCCEEECCCCcCCccCHHHhccCCccc
Confidence 788888888888777776654 68888888888888 777776654 4566999999999999987 5 589999
Q ss_pred EEEecCCcccccCCcccc-cCCCCCCCcccccCCCCCCCcccC
Q 002174 376 TVRLRGNPFCLNTNAEQF-CGSHSDDDNEIDRSTNSTLDCRAQ 417 (956)
Q Consensus 376 ~l~l~~Np~~c~c~~~~~-~~~~~~~~~~~~~~~~~~~~c~~~ 417 (956)
.+++++|||.|+|++.+| ..|+...... ....+.|.++
T Consensus 472 ~L~l~~N~~~c~c~~~~~~~~~~~~~~~~----~~~~~~C~~p 510 (520)
T 2z7x_B 472 KIWLHTNPWDCSCPRIDYLSRWLNKNSQK----EQGSAKCSGS 510 (520)
T ss_dssp EEECCSSCBCCCHHHHHHHHHHHHHTTTT----EESCCBBTTT
T ss_pred EEECcCCCCcccCCchHHHHHHHHhcccc----CCCCCCcCCc
Confidence 999999999999999999 7787544322 3345677664
No 258
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3.5e-35 Score=335.06 Aligned_cols=333 Identities=18% Similarity=0.160 Sum_probs=259.3
Q ss_pred CCCCCCCCCCCCCCCceeecCCC-------C-------CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCc
Q 002174 54 LSNWNRGDPCTSNWTGVLCFNTT-------M-------DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKIS 119 (956)
Q Consensus 54 l~~W~~~~~c~~~w~gv~C~~~~-------~-------~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~ 119 (956)
+++|.....|++.|.+..|.... . .-...+++.|++.++.+....+..|.++++|++|+|++|.++
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~ 82 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIE 82 (390)
T ss_dssp ----CCEECBCC------EEEESCEECSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCC
T ss_pred cCCCCCccceehhhhhhccceeeeeeecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCccc
Confidence 57899888888766665552111 0 012367889999999988665556899999999999999999
Q ss_pred ccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccC
Q 002174 120 GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELS 199 (956)
Q Consensus 120 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 199 (956)
+..+..|.++++|++|+|++|.+++..|..|+++++|++|+|++|+++...+..|.++++|++|+|++|.+++..+..+.
T Consensus 83 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (390)
T 3o6n_A 83 EIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ 162 (390)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS
T ss_pred ccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc
Confidence 87778999999999999999999988889999999999999999999966666689999999999999999988888899
Q ss_pred CccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhc---------------cCCCCCcEEeccCCCCc
Q 002174 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY---------------SNMSKLLKLSLRNCSLQ 264 (956)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~---------------~~l~~L~~L~Ls~N~l~ 264 (956)
.+++|++|++++|++++.. +..+++|+.|++++|.+++...+..+ ...++|+.|+|++|.++
T Consensus 163 ~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 163 ATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLT 239 (390)
T ss_dssp SCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCC
T ss_pred CCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCc
Confidence 9999999999999999753 33445555555555554432111111 12357888888888888
Q ss_pred cCCCCCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhh
Q 002174 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (956)
Q Consensus 265 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~ 343 (956)
+. +.+..+++|++|+|++|.+++..|..+.. .+|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..
T Consensus 240 ~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~ 316 (390)
T 3o6n_A 240 DT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ 316 (390)
T ss_dssp CC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH
T ss_pred cc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccc
Confidence 65 56788899999999999999776765543 489999999999985 5777788999999999999998 57777766
Q ss_pred hccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCcccccCCCC
Q 002174 344 SRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSHS 398 (956)
Q Consensus 344 l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~~~~~~~~~~ 398 (956)
+.. |+.|+|++|+++.++ ...++.++.|++++|||.|+|...++..+..
T Consensus 317 l~~-----L~~L~L~~N~i~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~ 365 (390)
T 3o6n_A 317 FDR-----LENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVAR 365 (390)
T ss_dssp HTT-----CSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTCCT
T ss_pred cCc-----CCEEECCCCccceeC-chhhccCCEEEcCCCCccchhHHHHHHHHHh
Confidence 554 559999999999986 2358899999999999999997776665544
No 259
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.3e-35 Score=364.41 Aligned_cols=316 Identities=20% Similarity=0.217 Sum_probs=172.9
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCcc--ccCCcccchhhccCCCCCCCCC-cccCCCccccc
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKE--IGNIKSLELLLLNGNELTGSLP-EELGYLPKLDR 158 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 158 (956)
.+++.|+|++|.+++..|..|+++++|++|+|++|.+++.+|.. |+++++|++|||++|.+++..+ ..|+++++|++
T Consensus 73 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~ 152 (844)
T 3j0a_A 73 PNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKS 152 (844)
T ss_dssp TTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCE
T ss_pred CCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCE
Confidence 45566666666666655666666666666666666665544443 5566666666666666654433 34555666666
Q ss_pred eeeccccccCCCCcccccc-------------------------------------------------------------
Q 002174 159 IQIDQNYISGSLPKSFANL------------------------------------------------------------- 177 (956)
Q Consensus 159 L~Ls~N~l~~~~p~~~~~l------------------------------------------------------------- 177 (956)
|+|++|.+++..+..+..+
T Consensus 153 L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~ 232 (844)
T 3j0a_A 153 IDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQ 232 (844)
T ss_dssp EEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCC
T ss_pred EECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCccc
Confidence 6665555544433332221
Q ss_pred ---------------------------------ccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCC
Q 002174 178 ---------------------------------NKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSE 224 (956)
Q Consensus 178 ---------------------------------~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 224 (956)
++|+.|+|++|.+.+..+..|..+++|+.|+|++|++++..+..|..
T Consensus 233 l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 312 (844)
T 3j0a_A 233 AFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYG 312 (844)
T ss_dssp BSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTT
T ss_pred ccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcC
Confidence 22333333333333333444555556666666666666555666666
Q ss_pred cchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCC-------------
Q 002174 225 LPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSI------------- 290 (956)
Q Consensus 225 l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~------------- 290 (956)
+++|++|+|++|.+++ ..+..|.++++|+.|+|++|.+++.++. |..+++|++|+|++|.+++..
T Consensus 313 l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N 391 (844)
T 3j0a_A 313 LDNLQVLNLSYNLLGE-LYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGN 391 (844)
T ss_dssp CSSCCEEEEESCCCSC-CCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESC
T ss_pred CCCCCEEECCCCCCCc-cCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCC
Confidence 6666666666666654 3455566666666666666666555443 555555555555555554210
Q ss_pred -----CCC-----------------------CCccccCEEEccCCcCC------------------------------CC
Q 002174 291 -----PPG-----------------------RLSLNITTIKLSNNKLT------------------------------GT 312 (956)
Q Consensus 291 -----p~~-----------------------~~~~~L~~L~Ls~N~l~------------------------------~~ 312 (956)
|.. ....+|+.|+|++|+++ +.
T Consensus 392 ~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 471 (844)
T 3j0a_A 392 KLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETEL 471 (844)
T ss_dssp CCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCC
T ss_pred CcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccccccc
Confidence 000 00012333333333332 12
Q ss_pred cchhcCCCCcCCeEecccccCCCcCChhhhhhccCC-----------------CCcceEEEccCCCCCCCCCCCCCCCCc
Q 002174 313 IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN-----------------ATETFILDFQNNNLTNISGSFNIPPNV 375 (956)
Q Consensus 313 ~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~-----------------~~~L~~L~Ls~N~L~~l~~~~~~~~l~ 375 (956)
.+..|.++++|+.|+|++|+|++..|..|..+..|+ .++|+.|||++|+|++++... +..+.
T Consensus 472 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~~-~~~L~ 550 (844)
T 3j0a_A 472 CWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPDV-FVSLS 550 (844)
T ss_dssp CSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSCC-CSSCC
T ss_pred chhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChhH-hCCcC
Confidence 223355556666666666666655555544333221 033445555555555544332 55788
Q ss_pred EEEecCCcccccCCcccccCCCCC
Q 002174 376 TVRLRGNPFCLNTNAEQFCGSHSD 399 (956)
Q Consensus 376 ~l~l~~Np~~c~c~~~~~~~~~~~ 399 (956)
.+++++|||.|+|++.+|..|+..
T Consensus 551 ~l~l~~Np~~C~c~~~~f~~~~~~ 574 (844)
T 3j0a_A 551 VLDITHNKFICECELSTFINWLNH 574 (844)
T ss_dssp EEEEEEECCCCSSSCCSHHHHHHH
T ss_pred EEEecCCCcccccccHHHHHHHHh
Confidence 999999999999999999988753
No 260
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.1e-34 Score=351.69 Aligned_cols=329 Identities=19% Similarity=0.226 Sum_probs=221.9
Q ss_pred eeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccc---------------------------------cCCc
Q 002174 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEI---------------------------------GNIK 130 (956)
Q Consensus 84 l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~---------------------------------~~l~ 130 (956)
++.|+|++|.+++..+..|+.+++|++|+|++|++++..|..| ..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 6667777777766666666677777777777776665555443 4455
Q ss_pred ccchhhccCCCCCCCCCcccCCCccccceeeccc----------------------------cccCCCCccccccccCCe
Q 002174 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN----------------------------YISGSLPKSFANLNKTRH 182 (956)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N----------------------------~l~~~~p~~~~~l~~L~~ 182 (956)
+|++|+|++|.+++..+..|.++++|++|+|++| ++++..|..|.++++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 5556666666666655555665555555555443 333334455555566666
Q ss_pred eecccCcccCCCc-cccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC-CCCchhccCCCCCcEEeccC
Q 002174 183 FHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG-TTIPASYSNMSKLLKLSLRN 260 (956)
Q Consensus 183 L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~p~~~~~l~~L~~L~Ls~ 260 (956)
|+|++|++++.+| ..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+++ ...|..|.++++|+.|+|++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 6666666654443 455556666666666666665555666666666666666666642 14677889999999999999
Q ss_pred CCCccCCCC-CCCCCCccEEEccCCcCCCCCCC---------CCCccccCEEEccCCcCCCCcchhcCCCCcCCeEeccc
Q 002174 261 CSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPP---------GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIAN 330 (956)
Q Consensus 261 N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~---------~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 330 (956)
|++++.++. +..+++|++|+|++|++++..+. .....+|+.|+|++|+++...+..|.++++|+.|+|++
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 569 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGL 569 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCC
Confidence 999988775 88999999999999999854221 11224899999999999966667899999999999999
Q ss_pred ccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC---CCCCCcEEEecCCcccccCCc-ccccCCCCCCCccccc
Q 002174 331 NSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNTNA-EQFCGSHSDDDNEIDR 406 (956)
Q Consensus 331 N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~---~~~~l~~l~l~~Np~~c~c~~-~~~~~~~~~~~~~~~~ 406 (956)
|+|++..+..|..+ ++|+.|+|++|+|++++... .++.+..+++++|||.|+|++ .||..|+......+..
T Consensus 570 N~l~~l~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~~~~~~~~~~~ 644 (680)
T 1ziw_A 570 NNLNTLPASVFNNQ-----VSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNWINETHTNIPE 644 (680)
T ss_dssp SCCCCCCTTTTTTC-----TTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECCSSCC------
T ss_pred CCCCcCCHhHhCCC-----CCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHHHHhcCccccc
Confidence 99996666556554 45669999999999988763 478999999999999999996 9999998654433221
Q ss_pred CCCCCCCcccCc
Q 002174 407 STNSTLDCRAQS 418 (956)
Q Consensus 407 ~~~~~~~c~~~~ 418 (956)
. ...+.|..|.
T Consensus 645 ~-~~~~~C~~p~ 655 (680)
T 1ziw_A 645 L-SSHYLCNTPP 655 (680)
T ss_dssp ------------
T ss_pred c-cCCcEECCch
Confidence 1 2345676643
No 261
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-34 Score=349.07 Aligned_cols=333 Identities=18% Similarity=0.168 Sum_probs=265.7
Q ss_pred CCCCCCCCCCCCCC---CCceeecCC----CC-------CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCC
Q 002174 53 KLSNWNRGDPCTSN---WTGVLCFNT----TM-------DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKI 118 (956)
Q Consensus 53 ~l~~W~~~~~c~~~---w~gv~C~~~----~~-------~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l 118 (956)
.+++|..+..|+.. |.++.|... .. .-...+++.|++.++.+....+..|.++++|++|+|++|.+
T Consensus 8 ~l~~~~~~~~C~~~~~~~~c~~~~~~i~~~~~~~~~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l 87 (597)
T 3oja_B 8 NVKPRQPEYKCIDSNLQYDCVFYDVHIDMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQI 87 (597)
T ss_dssp ---CCCSEECCCCC--CCSEEECSCEECSSCCCCEESCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCC
T ss_pred cccCCCCCCcCcccCcCceeEecCceecccccccccCcccccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCC
Confidence 46789888888764 555544311 00 01235678899999998876666789999999999999999
Q ss_pred cccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCcccc
Q 002174 119 SGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPEL 198 (956)
Q Consensus 119 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 198 (956)
++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.|++..+..|.++++|++|+|++|.+++..|..|
T Consensus 88 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 167 (597)
T 3oja_B 88 EEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTF 167 (597)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTT
T ss_pred CCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhh
Confidence 98888899999999999999999999888899999999999999999997777778999999999999999999889899
Q ss_pred CCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhc---------------cCCCCCcEEeccCCCC
Q 002174 199 SRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASY---------------SNMSKLLKLSLRNCSL 263 (956)
Q Consensus 199 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~---------------~~l~~L~~L~Ls~N~l 263 (956)
..+++|++|+|++|++++.. +..+++|+.|++++|.+++...|..+ ...++|+.|+|++|.+
T Consensus 168 ~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l 244 (597)
T 3oja_B 168 QATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNL 244 (597)
T ss_dssp TTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCC
T ss_pred hcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCC
Confidence 99999999999999999764 33445555666655555432222111 1125788888888888
Q ss_pred ccCCCCCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhh
Q 002174 264 QGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (956)
Q Consensus 264 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (956)
++. +.+..+++|+.|+|++|.+++.+|..+.. .+|+.|+|++|.+++ +|..+..+++|+.|+|++|+++ .+|..+.
T Consensus 245 ~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~ 321 (597)
T 3oja_B 245 TDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP 321 (597)
T ss_dssp CCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH
T ss_pred CCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccc
Confidence 874 56888999999999999999887776554 489999999999996 5777888999999999999999 6788777
Q ss_pred hhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCcccccCCC
Q 002174 343 QSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (956)
Q Consensus 343 ~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~~~~~~~~~ 397 (956)
.+.. |+.|+|++|+|++++ ...++.+..|++++|||.|+|...++..+.
T Consensus 322 ~l~~-----L~~L~L~~N~l~~~~-~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~ 370 (597)
T 3oja_B 322 QFDR-----LENLYLDHNSIVTLK-LSTHHTLKNLTLSHNDWDCNSLRALFRNVA 370 (597)
T ss_dssp HHTT-----CSEEECCSSCCCCCC-CCTTCCCSEEECCSSCEEHHHHHHHTTTCC
T ss_pred cCCC-----CCEEECCCCCCCCcC-hhhcCCCCEEEeeCCCCCChhHHHHHHHHh
Confidence 6655 459999999999886 235889999999999999999766665444
No 262
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.7e-36 Score=333.81 Aligned_cols=192 Identities=23% Similarity=0.266 Sum_probs=160.5
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCCh--------hhHHHHHHHHHHHHhcC---------------
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLH--------------- 678 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~--------------- 678 (956)
..++|++.+.||+|+||+||+|+. +|+.||||++..... ...+.+.+|++++++++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 356788999999999999999998 789999999875421 22367889999998886
Q ss_pred -----------CCceeeeeccccc-------------CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHH
Q 002174 679 -----------HRNLVSLVGYCDE-------------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRG 734 (956)
Q Consensus 679 -----------h~nIv~l~~~~~~-------------~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~g 734 (956)
||||+++++++.+ .+..++||||+++|++.+.+.+ ..+++..++.++.||+.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence 5666666666654 7899999999999977666633 357899999999999999
Q ss_pred HHHhh-hcCCCCEeccCCCcccEEEcCCC--------------------cEEEEeeccccccCCCCCCCccccceecccc
Q 002174 735 ILYLH-TEADPPVFHRDIKASNILLDHKF--------------------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 793 (956)
Q Consensus 735 L~yLH-~~~~~~ivH~Dlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 793 (956)
|+||| +.+ |+||||||+|||++.++ .+||+|||+|+.... ....
T Consensus 174 L~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------~~~~ 238 (336)
T 2vuw_A 174 LAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------GIVV 238 (336)
T ss_dssp HHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------TEEE
T ss_pred HHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------CcEE
Confidence 99999 899 99999999999999887 999999999986531 1346
Q ss_pred cCCCcccccccccCCCCCcccEeehHHH-HHHHHhCCCCCC
Q 002174 794 GTPGYLDPEYFLTHKLTDKSDVYSLGVV-FLELLTGMQPIS 833 (956)
Q Consensus 794 gt~~y~aPE~~~~~~~~~~sDVwSlG~l-l~elltg~~pf~ 833 (956)
||+.|+|||++.+.. +.++||||+|++ .+++++|..||.
T Consensus 239 gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~ 278 (336)
T 2vuw_A 239 FCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYS 278 (336)
T ss_dssp CCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred EeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCc
Confidence 999999999998766 889999998777 777888888873
No 263
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.5e-34 Score=343.40 Aligned_cols=339 Identities=19% Similarity=0.265 Sum_probs=224.0
Q ss_pred CCCCceeecCCC------CCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhcc
Q 002174 65 SNWTGVLCFNTT------MDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLN 138 (956)
Q Consensus 65 ~~w~gv~C~~~~------~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 138 (956)
|.|.|+ |+... +.+...+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|+
T Consensus 4 C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls 82 (549)
T 2z81_A 4 CDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLS 82 (549)
T ss_dssp ECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECT
T ss_pred CCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECC
Confidence 358887 75321 11234578999999999988888889999999999999999988888888999999999999
Q ss_pred CCCCCCCCCcccCCCccccceeeccccccC-CCCccccccccCCeeecccCcccCCCc-cccCCccccceeccccccccC
Q 002174 139 GNELTGSLPEELGYLPKLDRIQIDQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTG 216 (956)
Q Consensus 139 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~ 216 (956)
+|++++..|..|+++++|++|+|++|++++ ..|..|.++++|++|++++|.+.+.+| ..|.++++|++|++++|++++
T Consensus 83 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 83 DNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN 162 (549)
T ss_dssp TSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE
T ss_pred CCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc
Confidence 999987777778888888999998888886 356677788888888888777443443 456666666666666666665
Q ss_pred CCCcccCC------------------------cchhhhhcccCCcCCCCC------------------------------
Q 002174 217 YLPPELSE------------------------LPKLLILQLDNNNFEGTT------------------------------ 242 (956)
Q Consensus 217 ~~p~~l~~------------------------l~~L~~L~Ls~N~l~~~~------------------------------ 242 (956)
..|..+.. +++|++|+|++|++++..
T Consensus 163 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 242 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE 242 (549)
T ss_dssp ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHH
T ss_pred cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHH
Confidence 44444332 223333334444333210
Q ss_pred --------------------------------------------------------------------------------
Q 002174 243 -------------------------------------------------------------------------------- 242 (956)
Q Consensus 243 -------------------------------------------------------------------------------- 242 (956)
T Consensus 243 l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l 322 (549)
T 2z81_A 243 LLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKV 322 (549)
T ss_dssp HHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCC
T ss_pred HHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcc
Confidence
Q ss_pred --Cchhc-cCCCCCcEEeccCCCCcc---------------------------CCC---CCCCCCCccEEEccCCcCCCC
Q 002174 243 --IPASY-SNMSKLLKLSLRNCSLQG---------------------------PMP---DLSRIPNLGYLDLSSNQLNGS 289 (956)
Q Consensus 243 --~p~~~-~~l~~L~~L~Ls~N~l~~---------------------------~~~---~~~~l~~L~~L~Ls~N~l~~~ 289 (956)
+|..+ .++++|+.|+|++|++++ .++ .+..+++|++|++++|+++ .
T Consensus 323 ~~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 323 FLVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp CCCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred ccCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 11111 223444444444444432 211 1445566777777777776 4
Q ss_pred CCCCCCc-cccCEEEccCCcCCCCcch-----------------hcCCCCcCCeEecccccCCCcCChhhhhhccCCCCc
Q 002174 290 IPPGRLS-LNITTIKLSNNKLTGTIPS-----------------NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATE 351 (956)
Q Consensus 290 ~p~~~~~-~~L~~L~Ls~N~l~~~~p~-----------------~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~ 351 (956)
+|..... .+|++|+|++|+++..... .+.++++|++|+|++|+|+ .+|.. .. .+.
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~-~~-----l~~ 474 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDA-SL-----FPV 474 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCG-GG-----CTT
T ss_pred CChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCc-cc-----Ccc
Confidence 5543322 2455555555554421111 1247889999999999998 67753 22 456
Q ss_pred ceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCC-cccccCCCCCCCcccccCCCCCCCccc
Q 002174 352 TFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNEIDRSTNSTLDCRA 416 (956)
Q Consensus 352 L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~-~~~~~~~~~~~~~~~~~~~~~~~~c~~ 416 (956)
|+.|||++|+|++++.. + .++.++.+++++|||.|+|+ +.++..|+...... ....+.|..
T Consensus 475 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~l~~~l~~~~~~----~~~~~~C~~ 538 (549)
T 2z81_A 475 LLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQK----EQGSAKCSG 538 (549)
T ss_dssp CCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHHHHHHHHHHHHCTTT----EESCCBBTT
T ss_pred CCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCccHHHHHHHHHhcccc----cCCCCeECC
Confidence 78999999999998876 4 58999999999999999998 45566676543322 234456654
No 264
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.1e-34 Score=343.89 Aligned_cols=294 Identities=18% Similarity=0.306 Sum_probs=198.2
Q ss_pred CcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCC-Ccc-cCCccccCC------cccchhhccCCCCCCCCCc--c
Q 002174 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK-ISG-SIPKEIGNI------KSLELLLLNGNELTGSLPE--E 149 (956)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~~~~p~--~ 149 (956)
...+++.|+|++|++.+.+|..|+++++|++|+|++|+ ++| .+|..++++ ++|++|+|++|+++ .+|. .
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~ 325 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETS 325 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhh
Confidence 45678999999999999999999999999999999998 998 888888876 88999999999998 7888 8
Q ss_pred cCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccc-cceeccccccccCCCCcccCCcc--
Q 002174 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPS-LVHMLLDNNNLTGYLPPELSELP-- 226 (956)
Q Consensus 150 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~~l~~l~-- 226 (956)
++++++|++|+|++|+++|.+| .|.++++|++|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..++
T Consensus 326 l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~ 402 (636)
T 4eco_A 326 LQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVS 402 (636)
T ss_dssp HTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSS
T ss_pred hccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccC
Confidence 8888999999999988888888 7878888888888888777 66777777777 777777777777 5566655543
Q ss_pred hhhhhcccCCcCCCCCCchhcc-------CCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCc--
Q 002174 227 KLLILQLDNNNFEGTTIPASYS-------NMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-- 296 (956)
Q Consensus 227 ~L~~L~Ls~N~l~~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~-- 296 (956)
+|++|+|++|.+++ ..|..+. .+++|+.|+|++|+++..++. +..+++|++|+|++|+++ .+|...+.
T Consensus 403 ~L~~L~Ls~N~l~~-~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~ 480 (636)
T 4eco_A 403 VMSAIDFSYNEIGS-VDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDE 480 (636)
T ss_dssp CEEEEECCSSCTTT-TTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEET
T ss_pred ccCEEECcCCcCCC-cchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccc
Confidence 66666666666665 3455554 455555555555555544333 333455555555555554 44433221
Q ss_pred --------------------------------cccCEEEccCCcCCCCcchhcCCCCcCCeEec------ccccCCCcCC
Q 002174 297 --------------------------------LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI------ANNSLSGSIP 338 (956)
Q Consensus 297 --------------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~~ip 338 (956)
.+|+.|+|++|+|++ +|..+.++++|+.|+| ++|++.+.+|
T Consensus 481 ~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p 559 (636)
T 4eco_A 481 NENFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWP 559 (636)
T ss_dssp TEECTTGGGCCEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCC
T ss_pred cccccccCCccEEECcCCcCCccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccCh
Confidence 244444444444444 4444444444555544 2344444444
Q ss_pred hhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccc
Q 002174 339 SSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 339 ~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c 386 (956)
..+..+. +|+.|+|++|+|+.+|..+. +.++.|++++||+.|
T Consensus 560 ~~l~~l~-----~L~~L~Ls~N~l~~ip~~~~-~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 560 EGITLCP-----SLTQLQIGSNDIRKVNEKIT-PNISVLDIKDNPNIS 601 (636)
T ss_dssp TTGGGCS-----SCCEEECCSSCCCBCCSCCC-TTCCEEECCSCTTCE
T ss_pred HHHhcCC-----CCCEEECCCCcCCccCHhHh-CcCCEEECcCCCCcc
Confidence 4444332 34466667776666665543 566667777776665
No 265
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.5e-33 Score=309.21 Aligned_cols=175 Identities=23% Similarity=0.375 Sum_probs=152.2
Q ss_pred cCCCCC-CeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHH-HhcCCCceeeeeccccc----CCcEE
Q 002174 624 NNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFL-SRLHHRNLVSLVGYCDE----EGEQM 696 (956)
Q Consensus 624 ~~~~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~----~~~~~ 696 (956)
++|.+. +.||+|+||.||+|... +++.||+|++... ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456666 77999999999999964 6899999998642 3567888887 55689999999999876 67889
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeecccc
Q 002174 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSR 773 (956)
Q Consensus 697 LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGla~ 773 (956)
+||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++.
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 9999999999999998876667999999999999999999999999 999999999999998 7899999999986
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCC
Q 002174 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~ 835 (956)
... +..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~-----------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 169 ETT-----------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp ECT-----------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred ccc-----------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 532 134677899999999999999999999653
No 266
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.4e-33 Score=307.04 Aligned_cols=229 Identities=12% Similarity=0.073 Sum_probs=184.9
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|++.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 367999999999999999999975 589999999976432 2346889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++... ....++.+|+.|++.||+|||+++ |+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999542 234467889999999999999999 9999999999999999999998543
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
|++ .++.++|||||||++|||++|+.||........ .......+.+.
T Consensus 175 -------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------~~~~~~~~~~~ 221 (286)
T 3uqc_A 175 -------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------LAPAERDTAGQ 221 (286)
T ss_dssp -------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------SEECCBCTTSC
T ss_pred -------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------hHHHHHHhccC
Confidence 222 267899999999999999999999975432100 00000111111
Q ss_pred CC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002174 859 MG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 859 ~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.. ..+..++..+.+++.+||+.||.+| ++.++++.|+++..
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 11 1123466789999999999999999 99999999998754
No 267
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.2e-34 Score=346.17 Aligned_cols=239 Identities=21% Similarity=0.334 Sum_probs=193.8
Q ss_pred hcCCCCCCeeeeeCCeeEEEEEeC--CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc-----
Q 002174 623 TNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (956)
Q Consensus 623 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 694 (956)
.++|++.+.||+|+||+||+|.+. +++.||||++.... ......+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999975 68999999986533 3445678999999999999999999999977655
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++++|.+++.. .+++..++.++.||++||.|||+++ |+||||||+|||++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence 7999999999999988743 5899999999999999999999999 9999999999999986 899999999986
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002174 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... ....||+.|+|||++.+.. +.++|||||||++|||++|..||.....
T Consensus 231 ~~~~-----------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~----------------- 281 (681)
T 2pzi_A 231 INSF-----------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYV----------------- 281 (681)
T ss_dssp TTCC-----------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEEC-----------------
T ss_pred cccC-----------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccc-----------------
Confidence 5321 3346999999999987754 8899999999999999999888753110
Q ss_pred ccCCCCC-CChHHHHHHHHHHHHhcccCCCCCCC-HHHHHHHHHHhH
Q 002174 855 IDGNMGS-YPSECVEKFIKLALKCCQDETDARPS-MSEVMRELESIW 899 (956)
Q Consensus 855 ~~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs-~~~v~~~L~~~~ 899 (956)
+..... .....+..+.+++.+|++.+|.+||+ ++++.+.+..+.
T Consensus 282 -~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 282 -DGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -SSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -ccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 000011 11234578899999999999999995 556666666543
No 268
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-33 Score=323.18 Aligned_cols=240 Identities=15% Similarity=0.115 Sum_probs=180.4
Q ss_pred cCCCCCCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCC-Cceeeee------------
Q 002174 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHH-RNLVSLV------------ 686 (956)
Q Consensus 624 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h-~nIv~l~------------ 686 (956)
.+|...+.||+|+||+||+|.+. +|+.||||++...... ..+.+.+|+.+++.++| +|.....
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 45667789999999999999954 6999999998843322 24678999999999987 3221111
Q ss_pred ---------ccccc-----CCcEEEEEecCCCCCHHHHHh-----hcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEe
Q 002174 687 ---------GYCDE-----EGEQMLVYEFMSNGTLRDQLS-----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 747 (956)
Q Consensus 687 ---------~~~~~-----~~~~~LV~E~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 747 (956)
.++.. ....+++|+++ +++|.+++. ......+++..++.++.||++||+|||+++ |+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cc
Confidence 11111 22467888876 789999985 233456889999999999999999999999 99
Q ss_pred ccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCccccccc----------ccCCCCCcccEee
Q 002174 748 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF----------LTHKLTDKSDVYS 817 (956)
Q Consensus 748 H~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~sDVwS 817 (956)
||||||+|||++.++.+||+|||+++.... ......| +.|+|||++ .+..++.++||||
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwS 302 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWT 302 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTE----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCC----------ccccCCC-CceeCchhhhccccccccccCcCCCchhhHHH
Confidence 999999999999999999999999876431 1334567 999999999 5556888999999
Q ss_pred hHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 818 LGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 818 lG~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
|||++|||++|+.||...... .....++. ... .+++.+.+++.+||+.+|++||++.++++
T Consensus 303 lGvil~elltg~~Pf~~~~~~----------~~~~~~~~-~~~----~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 303 LGLAIYWIWCADLPNTDDAAL----------GGSEWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHHHHHSSCCCCTTGGG----------SCSGGGGS-SCC----CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHCCCCCCCcchh----------hhHHHHHh-hcc----cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999999999754321 11111111 111 23367888889999999999999776653
No 269
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7e-34 Score=313.82 Aligned_cols=254 Identities=25% Similarity=0.445 Sum_probs=226.6
Q ss_pred CCCCEEEccCCCCcc--cCCccccCCcccchhhccC-CCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCe
Q 002174 106 SYLTILDFMWNKISG--SIPKEIGNIKSLELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
.+++.|+|++|++++ .+|..|.++++|++|+|++ |.+++.+|..|+++++|++|+|++|++++.+|..|.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 579999999999999 8999999999999999995 9999999999999999999999999999999999999999999
Q ss_pred eecccCcccCCCccccCCccccceeccccccccCCCCcccCCcc-hhhhhcccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
|+|++|.+++.+|..+..+++|++|+|++|++++.+|..+..++ +|++|+|++|++++ .+|..+..++ |+.|+|++|
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~-~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG-KIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEE-ECCGGGGGCC-CSEEECCSS
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeec-cCChHHhCCc-ccEEECcCC
Confidence 99999999999999999999999999999999999999999998 99999999999987 6889999987 999999999
Q ss_pred CCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChh
Q 002174 262 SLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340 (956)
Q Consensus 262 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 340 (956)
.+++..+. +..+++|+.|+|++|.+++.+|......+|++|+|++|++++.+|..|.++++|+.|+|++|+++|.+|..
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 99987664 88999999999999999877776444558888888888888888888888888888888888888877764
Q ss_pred hhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCC
Q 002174 341 IWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTN 389 (956)
Q Consensus 341 ~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~ 389 (956)
.. ++.+..+++.+||+.|+..
T Consensus 288 -~~---------------------------l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 288 -GN---------------------------LQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp -TT---------------------------GGGSCGGGTCSSSEEESTT
T ss_pred -cc---------------------------ccccChHHhcCCCCccCCC
Confidence 32 3445566788888888643
No 270
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.6e-33 Score=333.98 Aligned_cols=150 Identities=17% Similarity=0.257 Sum_probs=118.9
Q ss_pred ccCCCCCcEEeccCCCCccCCC--CCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCC-CCcchhcCCCCc
Q 002174 247 YSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPSNFSGLPR 322 (956)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~-~~~p~~~~~l~~ 322 (956)
+.++++|+.|++++|.+++..+ .+..+++|++|++++|.+.+..|..+.. .+|++|+|++|.++ +.+|..|..+++
T Consensus 392 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~ 471 (570)
T 2z63_A 392 FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRN 471 (570)
T ss_dssp EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTT
T ss_pred ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccC
Confidence 5566666666666666666544 3677788888888888887666655443 37899999999887 578888999999
Q ss_pred CCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCCccccc-CCCCC
Q 002174 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFC-GSHSD 399 (956)
Q Consensus 323 L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~~~~~~-~~~~~ 399 (956)
|+.|+|++|++++..|..+..+. +|+.|+|++|++++++.. + .++.++.+++++|||.|+|+..++. .|+..
T Consensus 472 L~~L~l~~n~l~~~~~~~~~~l~-----~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~ 546 (570)
T 2z63_A 472 LTFLDLSQCQLEQLSPTAFNSLS-----SLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 546 (570)
T ss_dssp CCEEECTTSCCCEECTTTTTTCT-----TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHH
T ss_pred CCEEECCCCccccCChhhhhccc-----CCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHh
Confidence 99999999999988888876554 456999999999998765 3 5899999999999999999988877 88765
Q ss_pred CC
Q 002174 400 DD 401 (956)
Q Consensus 400 ~~ 401 (956)
..
T Consensus 547 ~~ 548 (570)
T 2z63_A 547 NS 548 (570)
T ss_dssp TG
T ss_pred cc
Confidence 43
No 271
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-32 Score=338.04 Aligned_cols=290 Identities=19% Similarity=0.283 Sum_probs=208.5
Q ss_pred cceeeEEEeCCCCccc-----------------cCCcCcc--CCCCCCEEEccCCCCcccCCccccCCcccchhhccCCC
Q 002174 81 YLHLRELQLLNLNLSG-----------------NLSPEIG--RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE 141 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~-----------------~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (956)
..+++.|+|++|.|+| .+|+.++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+
T Consensus 447 L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 447 LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 4578889999998888 3888877 89999999999998888888888889999999999888
Q ss_pred -CCC-CCCcccCCCc-------cccceeeccccccCCCCc--cccccccCCeeecccCcccCCCccccCCccccceeccc
Q 002174 142 -LTG-SLPEELGYLP-------KLDRIQIDQNYISGSLPK--SFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (956)
Q Consensus 142 -l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (956)
++| .+|..++.++ +|++|+|++|+++ .+|. .|.++++|+.|+|++|+++ .+| .|+.+++|+.|+|+
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 887 7777666655 8888888888888 7777 7888888888888888888 777 78888888888888
Q ss_pred cccccCCCCcccCCcch-hhhhcccCCcCCCCCCchhccCCCC--CcEEeccCCCCccCCCCC-----------------
Q 002174 211 NNNLTGYLPPELSELPK-LLILQLDNNNFEGTTIPASYSNMSK--LLKLSLRNCSLQGPMPDL----------------- 270 (956)
Q Consensus 211 ~N~l~~~~p~~l~~l~~-L~~L~Ls~N~l~~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~~~----------------- 270 (956)
+|+++ .+|..+..+++ |+.|+|++|.++ .+|..+..++. |+.|+|++|++++.+|.+
T Consensus 604 ~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~--~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~L 680 (876)
T 4ecn_A 604 YNQIE-EIPEDFCAFTDQVEGLGFSHNKLK--YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTL 680 (876)
T ss_dssp SSCCS-CCCTTSCEECTTCCEEECCSSCCC--SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEEC
T ss_pred CCccc-cchHHHhhccccCCEEECcCCCCC--cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEc
Confidence 88888 67777888877 888888888876 45666555443 666666666665543321
Q ss_pred -------------CCCCCccEEEccCCcCCCCCCCCCCcc---------ccCEEEccCCcCCCCcchhcC--CCCcCCeE
Q 002174 271 -------------SRIPNLGYLDLSSNQLNGSIPPGRLSL---------NITTIKLSNNKLTGTIPSNFS--GLPRLQRL 326 (956)
Q Consensus 271 -------------~~l~~L~~L~Ls~N~l~~~~p~~~~~~---------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L 326 (956)
..+++|+.|+|++|+|+ .+|...+.. +|+.|+|++|+|+ .+|..+. .+++|+.|
T Consensus 681 s~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L 758 (876)
T 4ecn_A 681 SYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNM 758 (876)
T ss_dssp CSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEE
T ss_pred cCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEE
Confidence 24556666677777666 555543321 6777777777777 5666665 77777777
Q ss_pred ecccccCCCcCChhhhhhccCCCCcceEEEccC------CCCC-CCCCCC-CCCCCcEEEecCCcc
Q 002174 327 FIANNSLSGSIPSSIWQSRTLNATETFILDFQN------NNLT-NISGSF-NIPPNVTVRLRGNPF 384 (956)
Q Consensus 327 ~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~------N~L~-~l~~~~-~~~~l~~l~l~~Np~ 384 (956)
+|++|+|++ +|..+..+.. |+.|+|++ |++. .+|..+ .++.++.|+|++|.+
T Consensus 759 ~Ls~N~L~~-lp~~l~~L~~-----L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 759 DVSYNCFSS-FPTQPLNSSQ-----LKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp ECCSSCCSS-CCCGGGGCTT-----CCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred EeCCCCCCc-cchhhhcCCC-----CCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 777777776 6666654433 34566654 4433 344444 356666666666665
No 272
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.98 E-value=8.9e-32 Score=325.34 Aligned_cols=319 Identities=19% Similarity=0.182 Sum_probs=265.1
Q ss_pred CCCCCCC--CCceeecCCCC----CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccc
Q 002174 60 GDPCTSN--WTGVLCFNTTM----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLE 133 (956)
Q Consensus 60 ~~~c~~~--w~gv~C~~~~~----~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 133 (956)
...|.|. +..+.|.+... .+...+++.|+|++|.+++..|..|+++++|++|+|++|++++..|..|.++++|+
T Consensus 5 ~~~C~~~~~~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 84 (606)
T 3t6q_A 5 DQKCIEKEVNKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLD 84 (606)
T ss_dssp -CCCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCC
T ss_pred cCceecccCCceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccC
Confidence 3445443 55688865432 23456899999999999999899999999999999999999998899999999999
Q ss_pred hhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccccc
Q 002174 134 LLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN 213 (956)
Q Consensus 134 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 213 (956)
+|+|++|++++..|..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++.....+..+++|++|+|++|+
T Consensus 85 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 85 TLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp EEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred eeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 99999999999999999999999999999999998778889999999999999999997554555569999999999999
Q ss_pred ccCCCCcccCCcchhh--hhcccCCcCCCCCCchhccCC-----------------------------------------
Q 002174 214 LTGYLPPELSELPKLL--ILQLDNNNFEGTTIPASYSNM----------------------------------------- 250 (956)
Q Consensus 214 l~~~~p~~l~~l~~L~--~L~Ls~N~l~~~~~p~~~~~l----------------------------------------- 250 (956)
+++..+..|..+++|+ .|++++|.+++ ..|..+...
T Consensus 165 l~~~~~~~~~~l~~L~~l~L~l~~n~l~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i 243 (606)
T 3t6q_A 165 IHYLSKEDMSSLQQATNLSLNLNGNDIAG-IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDI 243 (606)
T ss_dssp CCEECHHHHHTTTTCCSEEEECTTCCCCE-ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCC
T ss_pred ccccChhhhhhhcccceeEEecCCCccCc-cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhcccccccc
Confidence 9988888899999999 88999999876 344433221
Q ss_pred ----------CCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcC
Q 002174 251 ----------SKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 251 ----------~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
.+|+.|++++|.+++.++. |..+++|++|++++|+++ .+|..+.. .+|++|+|++|.+++..|..+.
T Consensus 244 ~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~ 322 (606)
T 3t6q_A 244 SPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISAS 322 (606)
T ss_dssp CGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGG
T ss_pred ChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhh
Confidence 1678888889999887775 888999999999999998 67776544 4899999999999988888999
Q ss_pred CCCcCCeEecccccCCCcCChh-hhhhccCCCCcceEEEccCCCCCCCC---CCC-CCCCCcEEEecCCccc
Q 002174 319 GLPRLQRLFIANNSLSGSIPSS-IWQSRTLNATETFILDFQNNNLTNIS---GSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~-~~~l~~l~~~~L~~L~Ls~N~L~~l~---~~~-~~~~l~~l~l~~Np~~ 385 (956)
++++|+.|++++|.+.+.+|.. +..+ ++|+.|++++|+++.+. ..+ .++.++.|++++|...
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~~~~~~l-----~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 389 (606)
T 3t6q_A 323 NFPSLTHLSIKGNTKRLELGTGCLENL-----ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPL 389 (606)
T ss_dssp GCTTCSEEECCSCSSCCBCCSSTTTTC-----TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCE
T ss_pred ccCcCCEEECCCCCcccccchhhhhcc-----CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCC
Confidence 9999999999999998777764 4443 45668888888888764 334 5788888888888753
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.8e-32 Score=302.92 Aligned_cols=285 Identities=21% Similarity=0.234 Sum_probs=153.1
Q ss_pred CCCHHHHHHHHHHHHhcc-CCCCCCCCCC----CCCCCCCCCCceeecCCCC---CCCcceeeEEEeCCCCccccCCcCc
Q 002174 31 ITDPIEVSALRSIKKSLV-DDYSKLSNWN----RGDPCTSNWTGVLCFNTTM---DDGYLHLRELQLLNLNLSGNLSPEI 102 (956)
Q Consensus 31 ~~~~~~~~al~~~k~~~~-~~~~~l~~W~----~~~~c~~~w~gv~C~~~~~---~~~~~~l~~L~L~~~~l~~~~~~~l 102 (956)
.....|+.||++||+++. ++.+.+.+|. ....|| .|.|+.|..... .....+++.|+|++++++ .+|+.+
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~-~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIE-TRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSC-CSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhccccccccccc-ccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 344678999999999985 5545567884 333333 699999942100 001134555555555555 455555
Q ss_pred cCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCe
Q 002174 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 103 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
+++++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..++++++|++|+|++|++.+.+|..+...
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~----- 173 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST----- 173 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-----
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc-----
Confidence 55555555555555555 55555555555555555555555 445555555555555555555554554443320
Q ss_pred eecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCC
Q 002174 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (956)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (956)
..+..|..+++|++|+|++|+++ .+|..+..+++|++|+|++|.+++ +|..+.++++|+.|+|++|+
T Consensus 174 ----------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~--l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 174 ----------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA--LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp ----------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC--CCGGGGGCTTCCEEECTTCT
T ss_pred ----------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc--CchhhccCCCCCEEECcCCc
Confidence 01112333555666666666555 445555555555555555555553 34445555555555555555
Q ss_pred CccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhh
Q 002174 263 LQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (956)
Q Consensus 263 l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~ 341 (956)
+.+..|. +..+++|++|+|++|++. +.+|..+.++++|+.|+|++|++.+.+|..+
T Consensus 241 ~~~~~p~~~~~l~~L~~L~L~~n~~~-----------------------~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l 297 (328)
T 4fcg_A 241 ALRNYPPIFGGRAPLKRLILKDCSNL-----------------------LTLPLDIHRLTQLEKLDLRGCVNLSRLPSLI 297 (328)
T ss_dssp TCCBCCCCTTCCCCCCEEECTTCTTC-----------------------CBCCTTGGGCTTCCEEECTTCTTCCCCCGGG
T ss_pred chhhhHHHhcCCCCCCEEECCCCCch-----------------------hhcchhhhcCCCCCEEeCCCCCchhhccHHH
Confidence 5544332 445555555555554444 4445555555555555555555555555555
Q ss_pred hhhccCCCCcceEEEccCCCCCCC
Q 002174 342 WQSRTLNATETFILDFQNNNLTNI 365 (956)
Q Consensus 342 ~~l~~l~~~~L~~L~Ls~N~L~~l 365 (956)
..+..+ +.+++..|.+..+
T Consensus 298 ~~L~~L-----~~l~l~~~~~~~l 316 (328)
T 4fcg_A 298 AQLPAN-----CIILVPPHLQAQL 316 (328)
T ss_dssp GGSCTT-----CEEECCGGGSCC-
T ss_pred hhccCc-----eEEeCCHHHHHHH
Confidence 544332 3555555555443
No 274
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=308.92 Aligned_cols=298 Identities=21% Similarity=0.294 Sum_probs=168.0
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
..++..+.+|+ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 45666666666 4555443 56777777777777666666777777777777777776655566666666666666666
Q ss_pred cccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCc
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIP 244 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p 244 (956)
+|++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++|+..+. ..+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~------------------------i~~ 178 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY------------------------ISE 178 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE------------------------ECT
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcce------------------------eCc
Confidence 66655555566666666666666665544444555555555555554222111 122
Q ss_pred hhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCC
Q 002174 245 ASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (956)
Q Consensus 245 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (956)
..|.++++|+.|+|++|+++.. +.+..+++|+.|+|++|+|+ +..|..|.++++|+
T Consensus 179 ~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~-----------------------~~~~~~~~~l~~L~ 234 (440)
T 3zyj_A 179 GAFEGLSNLRYLNLAMCNLREI-PNLTPLIKLDELDLSGNHLS-----------------------AIRPGSFQGLMHLQ 234 (440)
T ss_dssp TTTTTCSSCCEEECTTSCCSSC-CCCTTCSSCCEEECTTSCCC-----------------------EECTTTTTTCTTCC
T ss_pred chhhcccccCeecCCCCcCccc-cccCCCcccCEEECCCCccC-----------------------ccChhhhccCccCC
Confidence 2344455555555555555432 23444444444444444444 33344444455555
Q ss_pred eEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCcccccCCCCCCCc
Q 002174 325 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDN 402 (956)
Q Consensus 325 ~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~ 402 (956)
.|+|++|++++..+..|..+. +|+.|+|++|+|+.++... .++.+..|+|++|||.|||++.||..|......
T Consensus 235 ~L~L~~n~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~~~~~ 309 (440)
T 3zyj_A 235 KLWMIQSQIQVIERNAFDNLQ-----SLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDILWLSWWIKDMAP 309 (440)
T ss_dssp EEECTTCCCCEECTTSSTTCT-----TCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTHHHHHHHHTTSC
T ss_pred EEECCCCceeEEChhhhcCCC-----CCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCchHHHHHHHhccc
Confidence 555555555544444443322 2335555555555554432 367788999999999999999999888764321
Q ss_pred ccccCCCCCCCcccCcCCCCCccCCCCCCcceeecceee
Q 002174 403 EIDRSTNSTLDCRAQSCPTDYEYSPTSPIRCFCAAPLLV 441 (956)
Q Consensus 403 ~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~~c~~~~~~ 441 (956)
......+.|..|.-...............|..|.+.
T Consensus 310 ---~~~~~~~~C~~P~~l~g~~l~~l~~~~~~C~~P~i~ 345 (440)
T 3zyj_A 310 ---SNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIV 345 (440)
T ss_dssp ---SSCSCCCBEEESTTTTTCBCC----CCSCCCCCCEE
T ss_pred ---cCCccccCCCChhHhcCccHhHhhhhhccCCCCccc
Confidence 112234667776544444444445556678766554
No 275
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.97 E-value=8.4e-32 Score=315.67 Aligned_cols=305 Identities=19% Similarity=0.190 Sum_probs=264.7
Q ss_pred CcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccce
Q 002174 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (956)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 159 (956)
...+++.|+|++|.+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|
T Consensus 54 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 133 (477)
T 2id5_A 54 SFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSL 133 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEE
Confidence 45689999999999999999999999999999999999997666678999999999999999999999999999999999
Q ss_pred eeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCC
Q 002174 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 160 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (956)
+|++|.+++..+..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|++.+..+..|..+++|+.|+|++|.+.
T Consensus 134 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~ 213 (477)
T 2id5_A 134 EVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYL 213 (477)
T ss_dssp EECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTC
T ss_pred ECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccc
Confidence 99999999888999999999999999999999877788999999999999999999988889999999999999999987
Q ss_pred CCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhc
Q 002174 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNF 317 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~ 317 (956)
+ .++..+....+|+.|+|++|+++..++ .+..+++|+.|+|++|.+++..+..+.. .+|+.|+|++|++++..|..|
T Consensus 214 ~-~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (477)
T 2id5_A 214 D-TMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAF 292 (477)
T ss_dssp C-EECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTB
T ss_pred c-ccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHh
Confidence 6 566666666799999999999998775 4889999999999999999655554433 489999999999999999999
Q ss_pred CCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCcccccCCc
Q 002174 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTNA 390 (956)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~~~l~~l~l~~Np~~c~c~~ 390 (956)
.++++|+.|+|++|+|++..+..|..+. +|+.|+|++|.++.-.... -+.....+.+.+|.+.|.++.
T Consensus 293 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-----~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 293 RGLNYLRVLNVSGNQLTTLEESVFHSVG-----NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp TTCTTCCEEECCSSCCSCCCGGGBSCGG-----GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred cCcccCCEEECCCCcCceeCHhHcCCCc-----ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 9999999999999999977666665554 4569999999997532211 112223355677888887643
No 276
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.97 E-value=6.6e-32 Score=314.58 Aligned_cols=280 Identities=18% Similarity=0.205 Sum_probs=236.7
Q ss_pred CcceeeEEEeCCCCccccC-CcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcc--cCCCccc
Q 002174 80 GYLHLRELQLLNLNLSGNL-SPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEE--LGYLPKL 156 (956)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~-~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--~~~l~~L 156 (956)
...+++.|+|++|.+.+.+ +..|.++++|++|+|++|++++..|..|+++++|++|+|++|++++.+|.. |..+++|
T Consensus 52 ~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L 131 (455)
T 3v47_A 52 RLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSL 131 (455)
T ss_dssp SCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTC
T ss_pred cCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccC
Confidence 4567899999999888666 457899999999999999999888888999999999999999998755554 8889999
Q ss_pred cceeeccccccCCCCcc-ccccccCCeeecccCcccCCCccccCCc----------------------------------
Q 002174 157 DRIQIDQNYISGSLPKS-FANLNKTRHFHMNNNSISGQIPPELSRL---------------------------------- 201 (956)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~l~~l---------------------------------- 201 (956)
++|+|++|++++..|.. +.++++|++|+|++|++++..+..+..+
T Consensus 132 ~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~ 211 (455)
T 3v47_A 132 EMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKN 211 (455)
T ss_dssp CEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTT
T ss_pred CEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhcccccccccccc
Confidence 99999999999887776 8899999999999999988777766544
Q ss_pred cccceeccccccccCCCCcccCC---------------------------------------cchhhhhcccCCcCCCCC
Q 002174 202 PSLVHMLLDNNNLTGYLPPELSE---------------------------------------LPKLLILQLDNNNFEGTT 242 (956)
Q Consensus 202 ~~L~~L~L~~N~l~~~~p~~l~~---------------------------------------l~~L~~L~Ls~N~l~~~~ 242 (956)
++|++|+|++|++++..|..+.. .++|+.|+|++|.+++ .
T Consensus 212 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~ 290 (455)
T 3v47_A 212 TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFA-L 290 (455)
T ss_dssp CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCE-E
T ss_pred ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccc-c
Confidence 68999999999887654443321 2579999999999987 6
Q ss_pred CchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCC
Q 002174 243 IPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 243 ~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
.|..+.++++|+.|+|++|++++.++ .+..+++|++|+|++|.+++..|..+.. .+|++|+|++|++++..|..|.++
T Consensus 291 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 370 (455)
T 3v47_A 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGL 370 (455)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred chhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcccc
Confidence 78899999999999999999999876 5899999999999999998666665443 489999999999999999999999
Q ss_pred CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCC
Q 002174 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l 365 (956)
++|++|+|++|++++..+..+..+ ++|+.|+|++|+++.-
T Consensus 371 ~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 371 PNLKELALDTNQLKSVPDGIFDRL-----TSLQKIWLHTNPWDCS 410 (455)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTC-----TTCCEEECCSSCBCCC
T ss_pred ccccEEECCCCccccCCHhHhccC-----CcccEEEccCCCcccC
Confidence 999999999999997666666554 4566999999999864
No 277
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.97 E-value=6.9e-31 Score=328.88 Aligned_cols=300 Identities=19% Similarity=0.207 Sum_probs=222.9
Q ss_pred CcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccC-CccccCCcccchhhccCCCCCCCCCcccCCCccccc
Q 002174 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSI-PKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDR 158 (956)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 158 (956)
...+++.|+|++|.+++..+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 101 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFE 101 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCE
Confidence 4468999999999999988999999999999999999766666 788999999999999999999888999999999999
Q ss_pred eeeccccccCCCCcc--ccccccCCeeecccCcccCCCc-cccCCccccceeccccccccCCCCcccCCc--chhhhhcc
Q 002174 159 IQIDQNYISGSLPKS--FANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGYLPPELSEL--PKLLILQL 233 (956)
Q Consensus 159 L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l--~~L~~L~L 233 (956)
|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..|..+ ++|+.|+|
T Consensus 102 L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L 181 (844)
T 3j0a_A 102 LRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSL 181 (844)
T ss_dssp EECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEE
T ss_pred eeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEEC
Confidence 999999999866665 8999999999999999987655 578999999999999999998888888776 77888888
Q ss_pred cCCcCCCCCCchhccCCCC------CcEEeccCCCCccCCCC-------------------------------------C
Q 002174 234 DNNNFEGTTIPASYSNMSK------LLKLSLRNCSLQGPMPD-------------------------------------L 270 (956)
Q Consensus 234 s~N~l~~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~~~-------------------------------------~ 270 (956)
++|.+.+ ..|..+..+.+ |+.|+|++|.+++..+. |
T Consensus 182 ~~n~l~~-~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f 260 (844)
T 3j0a_A 182 AANSLYS-RVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTF 260 (844)
T ss_dssp CCSBSCC-CCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTT
T ss_pred CCCcccc-ccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhh
Confidence 8888776 45555554444 77777777765543221 1
Q ss_pred CC--CCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccC
Q 002174 271 SR--IPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL 347 (956)
Q Consensus 271 ~~--l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l 347 (956)
.. .++|+.|+|++|.+.+..+..+.. .+|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+..
T Consensus 261 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~- 339 (844)
T 3j0a_A 261 AGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPK- 339 (844)
T ss_dssp TTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTT-
T ss_pred hccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCC-
Confidence 11 145667777777766554444332 26677777777776666666777777777777777776666665554333
Q ss_pred CCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCccc
Q 002174 348 NATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 348 ~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~ 385 (956)
|+.|+|++|+++.++.. + .++.++.|++++|.+.
T Consensus 340 ----L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~ 375 (844)
T 3j0a_A 340 ----VAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALT 375 (844)
T ss_dssp ----CCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSC
T ss_pred ----CCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCC
Confidence 34666666666666543 2 3566666666666543
No 278
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.97 E-value=9.5e-31 Score=320.75 Aligned_cols=187 Identities=23% Similarity=0.297 Sum_probs=159.0
Q ss_pred CCCCCCceeecCCCC----CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhcc
Q 002174 63 CTSNWTGVLCFNTTM----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLN 138 (956)
Q Consensus 63 c~~~w~gv~C~~~~~----~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 138 (956)
|.|.++.+.|..... .+...+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 2 C~~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 81 (680)
T 1ziw_A 2 CTVSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQ 81 (680)
T ss_dssp --CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECC
T ss_pred ceeECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECC
Confidence 655666788865432 2334689999999999998888889999999999999999999889999999999999999
Q ss_pred CCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCC
Q 002174 139 GNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYL 218 (956)
Q Consensus 139 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 218 (956)
+|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..+.++++|++|+|++|++++..
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 99999766668999999999999999999888889999999999999999999988999999999999999999999887
Q ss_pred CcccC--CcchhhhhcccCCcCCCCCCchhccCC
Q 002174 219 PPELS--ELPKLLILQLDNNNFEGTTIPASYSNM 250 (956)
Q Consensus 219 p~~l~--~l~~L~~L~Ls~N~l~~~~~p~~~~~l 250 (956)
+..+. .+++|+.|++++|.+++ ..|..+..+
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~~l 194 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKE-FSPGCFHAI 194 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCC-BCTTGGGGS
T ss_pred HHHhhccccccccEEECCCCcccc-cChhhhhhh
Confidence 77654 45789999999998876 455544433
No 279
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=3.3e-31 Score=308.24 Aligned_cols=299 Identities=17% Similarity=0.247 Sum_probs=207.2
Q ss_pred CCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecc
Q 002174 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (956)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (956)
....++.+++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~ 131 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELF 131 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECC
Confidence 3457888888888 6776654 578888888888888778888888888888888888887777788888888888888
Q ss_pred cCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccC
Q 002174 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (956)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 266 (956)
+|+|++..+..|..+++|++|+|++|+++...+..|..+++|+.|+|++|...+...+..|.++++|+.|+|++|++++.
T Consensus 132 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~ 211 (452)
T 3zyi_A 132 DNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM 211 (452)
T ss_dssp SSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC
T ss_pred CCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc
Confidence 88888666666777788888888888777665566666777777777664332212233455555555555555555543
Q ss_pred CCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhcc
Q 002174 267 MPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (956)
Q Consensus 267 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~ 346 (956)
+.+..++ +|+.|+|++|.|++..|..|.++++|+.|+|++|++++..|..|..+.
T Consensus 212 -~~~~~l~-----------------------~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~- 266 (452)
T 3zyi_A 212 -PNLTPLV-----------------------GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA- 266 (452)
T ss_dssp -CCCTTCT-----------------------TCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT-
T ss_pred -ccccccc-----------------------cccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCC-
Confidence 2333333 555666666666666677777777777777877777777776665543
Q ss_pred CCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCcccccCCCCCCCcccccCCCCCCCcccCcCCCCCc
Q 002174 347 LNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQSCPTDYE 424 (956)
Q Consensus 347 l~~~~L~~L~Ls~N~L~~l~~~~--~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 424 (956)
+|+.|+|++|+|++++... .++.+..|+|++|||.|||++.+|..|++.... ......+.|.+|.-.....
T Consensus 267 ----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l~~~~~---~~~~~~~~C~~P~~l~g~~ 339 (452)
T 3zyi_A 267 ----SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIP---TNSTCCGRCHAPMHMRGRY 339 (452)
T ss_dssp ----TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTTTHHHHHHHHHHC------CCSSCBEEESTTTTTCB
T ss_pred ----CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCCchHHHHHHHHhCc---cCCccCcEeCCchHhccch
Confidence 3457888888887777653 478899999999999999999999888753211 1122345677765545554
Q ss_pred cCCCCCCcceeeccee
Q 002174 425 YSPTSPIRCFCAAPLL 440 (956)
Q Consensus 425 ~~p~~~~~~~c~~~~~ 440 (956)
..........|..|.+
T Consensus 340 l~~~~~~~~~C~~P~i 355 (452)
T 3zyi_A 340 LVEVDQASFQCSAPFI 355 (452)
T ss_dssp TTSCCGGGCCCCCCCC
T ss_pred hhccchhhhcccCccc
Confidence 4445555667876644
No 280
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=3.5e-30 Score=286.95 Aligned_cols=268 Identities=21% Similarity=0.298 Sum_probs=135.0
Q ss_pred CCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeec
Q 002174 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (956)
++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEEC
Confidence 35555555555555444445555555555555555555444555555555555555555555 3333322 45555555
Q ss_pred ccCcccCCCccccCCccccceecccccccc--CCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCC
Q 002174 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLT--GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (956)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (956)
++|++++..+..|..+++|++|++++|.++ +..+..+..+ +|++|++++|++++ +|..+. ++|+.|+|++|.+
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~--l~~~~~--~~L~~L~l~~n~i 205 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG--IPKDLP--ETLNELHLDHNKI 205 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS--CCSSSC--SSCSCCBCCSSCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc--cCcccc--CCCCEEECCCCcC
Confidence 555555444444555555555555555553 2444445444 55555555555543 333322 4555555555555
Q ss_pred ccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhh
Q 002174 264 QGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (956)
Q Consensus 264 ~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~ 341 (956)
++.++ .+..+++|++|+|++|++++..+..+.. .+|+.|+|++|+++ .+|..+..+++|+.|+|++|++++..+..|
T Consensus 206 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 206 QAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp CCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 55443 3555555555555555555433322222 25555555555555 455556666666666666666665444444
Q ss_pred hhhcc-CCCCcceEEEccCCCCC--CCCCC-C-CCCCCcEEEecCC
Q 002174 342 WQSRT-LNATETFILDFQNNNLT--NISGS-F-NIPPNVTVRLRGN 382 (956)
Q Consensus 342 ~~l~~-l~~~~L~~L~Ls~N~L~--~l~~~-~-~~~~l~~l~l~~N 382 (956)
..... .....|+.|++++|.++ .++.. + .++.++.+++++|
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n 330 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNY 330 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC---
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhcccc
Confidence 33211 11234556666666665 22222 2 3555666666665
No 281
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.9e-32 Score=304.01 Aligned_cols=307 Identities=15% Similarity=0.197 Sum_probs=197.2
Q ss_pred CCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCC
Q 002174 62 PCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE 141 (956)
Q Consensus 62 ~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (956)
.|.|.|.|+ |. +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 27 ~~~C~~~~~-c~---------------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 87 (353)
T 2z80_A 27 SLSCDRNGI-CK---------------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNG 87 (353)
T ss_dssp CCEECTTSE-EE---------------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCCCCCCeE-ee---------------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCc
Confidence 344468887 63 2344554 3455444 478888888888876555577788888888888888
Q ss_pred CCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCc-cccCCccccceeccccc-cccCCCC
Q 002174 142 LTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNN-NLTGYLP 219 (956)
Q Consensus 142 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N-~l~~~~p 219 (956)
+++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|+++...+ ..+..+++|++|++++| .+++..+
T Consensus 88 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 167 (353)
T 2z80_A 88 INTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQR 167 (353)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECT
T ss_pred cCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCH
Confidence 877777778888888888888888876555557778888888888887774333 36777778888888777 4665556
Q ss_pred cccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCccc
Q 002174 220 PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLN 298 (956)
Q Consensus 220 ~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 298 (956)
..|..+++|++|++++|.+++ ..|..+.++++|++|++++|.++..+.. +..+++|+.|++++|.+++..+.....
T Consensus 168 ~~~~~l~~L~~L~l~~n~l~~-~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~-- 244 (353)
T 2z80_A 168 KDFAGLTFLEELEIDASDLQS-YEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST-- 244 (353)
T ss_dssp TTTTTCCEEEEEEEEETTCCE-ECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------
T ss_pred HHccCCCCCCEEECCCCCcCc-cCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc--
Confidence 677777777777777777765 4566777777777777777776544433 334567777777777776433322110
Q ss_pred cCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCC----cCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCC
Q 002174 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG----SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIP 372 (956)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~----~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~~~ 372 (956)
......++.++|++|.+.+ .+|..+..+. +|+.|||++|+|+.+|... .++
T Consensus 245 ------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~-----~L~~L~Ls~N~l~~i~~~~~~~l~ 301 (353)
T 2z80_A 245 ------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQIS-----GLLELEFSRNQLKSVPDGIFDRLT 301 (353)
T ss_dssp --------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCT-----TCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ------------------ccccchhhccccccccccCcchhhhHHHHhccc-----CCCEEECCCCCCCccCHHHHhcCC
Confidence 1122334444444444443 2333333322 3345666666666665553 477
Q ss_pred CCcEEEecCCcccccCC-cccccCCCCCCCcccccCCCCCCCcccC
Q 002174 373 PNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNEIDRSTNSTLDCRAQ 417 (956)
Q Consensus 373 ~l~~l~l~~Np~~c~c~-~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 417 (956)
.++.|++++|||.|+|+ +.++-.|.......+ ...+.|.++
T Consensus 302 ~L~~L~L~~N~~~~~~~~l~~l~~~~~~~~~~~----~~~~~C~~p 343 (353)
T 2z80_A 302 SLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKE----QGSAKCSGS 343 (353)
T ss_dssp TCCEEECCSSCBCCCHHHHHHHHHHHHHTTTTE----ESCCBBTTT
T ss_pred CCCEEEeeCCCccCcCCCcHHHHHHHHhccccC----CCCcccCCC
Confidence 88999999999999996 777777776544333 235667663
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.2e-30 Score=286.02 Aligned_cols=269 Identities=20% Similarity=0.293 Sum_probs=159.2
Q ss_pred CCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeec
Q 002174 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (956)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|..+. ++|++|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEEC
Confidence 45666666666666555555666666666666666666555666666666666666666665 3343332 56666666
Q ss_pred ccCcccCCCccccCCccccceeccccccccC--CCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCC
Q 002174 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTG--YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (956)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (956)
++|++++..+..|.++++|++|++++|+++. ..+..|..+++|++|++++|.++. +|..+. ++|+.|++++|.+
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~--l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT--IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS--CCSSCC--TTCSEEECTTSCC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc--CCcccc--ccCCEEECCCCcC
Confidence 6666665555556666666666666666642 455556666666666666666653 343332 5666666666666
Q ss_pred ccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhh
Q 002174 264 QGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (956)
Q Consensus 264 ~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~ 341 (956)
++..+ .+..+++|++|+|++|.+++..+..+.. .+|++|+|++|+++ .+|..+..+++|++|+|++|++++..+..|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 66544 3666666666666666666444433322 36667777777666 566667777777777777777775555554
Q ss_pred hhhcc-CCCCcceEEEccCCCCCCC--C-CCC-CCCCCcEEEecCC
Q 002174 342 WQSRT-LNATETFILDFQNNNLTNI--S-GSF-NIPPNVTVRLRGN 382 (956)
Q Consensus 342 ~~l~~-l~~~~L~~L~Ls~N~L~~l--~-~~~-~~~~l~~l~l~~N 382 (956)
..... .....+..|++++|.++.. + ..+ .+..+..++|++|
T Consensus 284 ~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 284 CPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred CCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 33211 1234566777777777542 2 223 2566677777776
No 283
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=309.14 Aligned_cols=290 Identities=19% Similarity=0.214 Sum_probs=198.4
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceee
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|+|++|.+++..+..|.++++|++|+|++|++++..|..|+++++|++|||++|+++ .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 68999999999999888889999999999999999999888999999999999999999999 56766 8999999999
Q ss_pred ccccccC-CCCccccccccCCeeecccCcccCCCccccCCcccc--ceeccccccc--cCCCCcccCCcc----------
Q 002174 162 DQNYISG-SLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSL--VHMLLDNNNL--TGYLPPELSELP---------- 226 (956)
Q Consensus 162 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~L~~N~l--~~~~p~~l~~l~---------- 226 (956)
++|++++ .+|..|+++++|++|+|++|.+++ ..+..+++| ++|+|++|++ .+..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 9999997 478999999999999999999874 234445555 6666666655 444444443311
Q ss_pred -------------------------------------------------------------------------hhhhhcc
Q 002174 227 -------------------------------------------------------------------------KLLILQL 233 (956)
Q Consensus 227 -------------------------------------------------------------------------~L~~L~L 233 (956)
+|++|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 3444444
Q ss_pred cCCcCCCCCCchhc-----------------------------------------------------cCCCCCcEEeccC
Q 002174 234 DNNNFEGTTIPASY-----------------------------------------------------SNMSKLLKLSLRN 260 (956)
Q Consensus 234 s~N~l~~~~~p~~~-----------------------------------------------------~~l~~L~~L~Ls~ 260 (956)
++|+++| .+|..+ ..+++|++|++++
T Consensus 255 ~~n~l~~-~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 255 SNVKLQG-QLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSN 333 (520)
T ss_dssp EEEEEES-CCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCS
T ss_pred ecccccC-ccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeEC
Confidence 4444443 233333 3445555555555
Q ss_pred CCCccCCC-CCCCCCCccEEEccCCcCCC--CCCCCCC-ccccCEEEccCCcCCCCcch-hcCCCCcCCeEecccccCCC
Q 002174 261 CSLQGPMP-DLSRIPNLGYLDLSSNQLNG--SIPPGRL-SLNITTIKLSNNKLTGTIPS-NFSGLPRLQRLFIANNSLSG 335 (956)
Q Consensus 261 N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~--~~p~~~~-~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~ 335 (956)
|++++..+ .+..+++|++|++++|++++ .+|..+. ..+|++|+|++|.+++.+|. .|..+++|+.|+|++|++++
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 55555322 35555555555555555553 2222211 22555666666665553333 35555566666666666555
Q ss_pred cCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCccc
Q 002174 336 SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 336 ~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~~~l~~l~l~~Np~~ 385 (956)
.+|..+. +.|+.|+|++|+|+.+|..+ .++.++.|++++|.+.
T Consensus 414 ~~~~~l~-------~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 414 TIFRCLP-------PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp GGGGSCC-------TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred chhhhhc-------ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCC
Confidence 5544331 45677888888888777755 5777888888887754
No 284
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.8e-30 Score=309.73 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=86.4
Q ss_pred hccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCC--ccccCEEEccCCcCCCCcchhcCCCCcC
Q 002174 246 SYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRL 323 (956)
Q Consensus 246 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 323 (956)
.+.++++|++|++++|.+++.++.+..+++|++|++++|.+.+..+...+ ..+|++|+|++|.+++..|..|.++++|
T Consensus 368 ~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 447 (570)
T 2z63_A 368 SDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 447 (570)
T ss_dssp HHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred cccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcC
Confidence 34444455555555555544444455666777777777777655553222 2367777777777777777777777777
Q ss_pred CeEecccccCC-CcCChhhhhhccCCCCcceEEEccCCCCCCC-CCCC-CCCCCcEEEecCCccc
Q 002174 324 QRLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 324 ~~L~L~~N~l~-~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l-~~~~-~~~~l~~l~l~~Np~~ 385 (956)
+.|+|++|+++ +.+|..+..+. +|+.|+|++|+++++ |..+ .++.++.|++++|.+.
T Consensus 448 ~~L~l~~n~l~~~~~p~~~~~l~-----~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 507 (570)
T 2z63_A 448 EVLKMAGNSFQENFLPDIFTELR-----NLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507 (570)
T ss_dssp CEEECTTCEEGGGEECSCCTTCT-----TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred cEEECcCCcCccccchhhhhccc-----CCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCC
Confidence 77777777776 45666665443 345788888888776 4444 4677778888777654
No 285
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.97 E-value=6.3e-30 Score=306.01 Aligned_cols=147 Identities=17% Similarity=0.212 Sum_probs=124.0
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
+.++++++++++ +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 679999999996 777665 89999999999999888889999999999999999999988999999999999999999
Q ss_pred cccCCCCccccccccCCeeecccCcccC-CCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcC
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 238 (956)
+|+ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|+|++|++++.....+..+ +|+.|+|++|.+
T Consensus 111 ~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L-~L~~L~L~~n~l 181 (562)
T 3a79_B 111 RLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL-HLSCILLDLVSY 181 (562)
T ss_dssp CCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTS-CEEEEEEEESSC
T ss_pred cCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhc-eeeEEEeecccc
Confidence 999 56666 89999999999999997 456899999999999999999875322222222 225556655555
No 286
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2e-29 Score=280.62 Aligned_cols=288 Identities=23% Similarity=0.300 Sum_probs=229.4
Q ss_pred CCCCCCCCceeecCCCCC----CCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhh
Q 002174 61 DPCTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~~~----~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 136 (956)
..|.|.|+.+.|...... .....++.|+|++|++++..+..|+++++|++|+|++|++++..|..|.++++|++|+
T Consensus 27 ~~c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 27 FRCQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp TTCEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 346667999999754322 2345788899999999987777899999999999999999987788899999999999
Q ss_pred ccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccC--CCccccCCccccceeccccccc
Q 002174 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG--QIPPELSRLPSLVHMLLDNNNL 214 (956)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l 214 (956)
|++|+++ .+|..+. ++|++|++++|++++..+..|.++++|+.|+|++|.+.. ..+..+..+++|++|++++|++
T Consensus 107 Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l 183 (330)
T 1xku_A 107 LSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNI 183 (330)
T ss_dssp CCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCC
T ss_pred CCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcc
Confidence 9999988 5666554 789999999999997777888999999999999999863 6677888899999999999999
Q ss_pred cCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCC
Q 002174 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG 293 (956)
Q Consensus 215 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 293 (956)
+. +|..+. ++|++|+|++|.+++ ..+..|.++++|+.|+|++|.+++.++ .+..+++|++|+|++|+++ .+|..
T Consensus 184 ~~-l~~~~~--~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 258 (330)
T 1xku_A 184 TT-IPQGLP--PSLTELHLDGNKITK-VDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGG 258 (330)
T ss_dssp CS-CCSSCC--TTCSEEECTTSCCCE-ECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTT
T ss_pred cc-CCcccc--ccCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChh
Confidence 85 455443 789999999999986 467888999999999999999988776 4888899999999999998 67765
Q ss_pred CCc-cccCEEEccCCcCCCCcchhcCCC------CcCCeEecccccCCC--cCChhhhhhccCCCCcceEEEccCCC
Q 002174 294 RLS-LNITTIKLSNNKLTGTIPSNFSGL------PRLQRLFIANNSLSG--SIPSSIWQSRTLNATETFILDFQNNN 361 (956)
Q Consensus 294 ~~~-~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~~--~ip~~~~~l~~l~~~~L~~L~Ls~N~ 361 (956)
+.. .+|++|+|++|+|++..+..|+.. +.|+.|++++|.+.. ..|..|..+ ..++.++|++|+
T Consensus 259 l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~-----~~l~~l~L~~N~ 330 (330)
T 1xku_A 259 LADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCV-----YVRAAVQLGNYK 330 (330)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTC-----CCGGGEEC----
T ss_pred hccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccc-----cceeEEEecccC
Confidence 543 479999999999998877777653 778899999999863 344555433 445688998885
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.4e-29 Score=281.94 Aligned_cols=287 Identities=23% Similarity=0.315 Sum_probs=241.8
Q ss_pred CCCCCCCCceeecCCCCC----CCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhh
Q 002174 61 DPCTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~~~----~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 136 (956)
..|.|.|+.+.|...... ....+++.|+|++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 29 ~~c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 29 FGCHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp SSCEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred CCCcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 446668999999764422 2345899999999999988888999999999999999999988899999999999999
Q ss_pred ccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCccc--CCCccccCCccccceeccccccc
Q 002174 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS--GQIPPELSRLPSLVHMLLDNNNL 214 (956)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l 214 (956)
|++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|+.|++++|.++ +..+..+..+ +|++|++++|++
T Consensus 109 L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l 184 (332)
T 2ft3_A 109 ISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKL 184 (332)
T ss_dssp CCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBC
T ss_pred CCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCC
Confidence 9999998 6676665 89999999999999877788999999999999999996 4678888888 999999999999
Q ss_pred cCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCC
Q 002174 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPG 293 (956)
Q Consensus 215 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~ 293 (956)
++ +|..+. ++|++|+|++|.+++ ..+..|.++++|+.|+|++|++++.++ .+..+++|+.|+|++|+++ .+|..
T Consensus 185 ~~-l~~~~~--~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 185 TG-IPKDLP--ETLNELHLDHNKIQA-IELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp SS-CCSSSC--SSCSCCBCCSSCCCC-CCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred Cc-cCcccc--CCCCEEECCCCcCCc-cCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 96 555554 789999999999987 466789999999999999999999877 4889999999999999999 77776
Q ss_pred CCc-cccCEEEccCCcCCCCcchhcCCC------CcCCeEecccccCC--CcCChhhhhhccCCCCcceEEEccCCC
Q 002174 294 RLS-LNITTIKLSNNKLTGTIPSNFSGL------PRLQRLFIANNSLS--GSIPSSIWQSRTLNATETFILDFQNNN 361 (956)
Q Consensus 294 ~~~-~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~--~~ip~~~~~l~~l~~~~L~~L~Ls~N~ 361 (956)
+.. .+|+.|+|++|.|++..+..|..+ ++|+.|++++|.+. +..|..|..+.. |+.|++++|+
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~-----L~~l~l~~n~ 331 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTD-----RLAIQFGNYK 331 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCC-----STTEEC----
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccch-----hhhhhccccc
Confidence 544 489999999999998888888764 67999999999998 566666665544 4579999884
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.96 E-value=4.3e-29 Score=279.85 Aligned_cols=281 Identities=21% Similarity=0.312 Sum_probs=216.2
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|++++|.+++.. + +.++++|++|+|++|.+++ ++ .|.++++|++|+|++|.+++. +. +..+++|++|+
T Consensus 65 ~~~L~~L~l~~n~i~~~~-~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~ 138 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDIS-P-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMYSLN 138 (347)
T ss_dssp CTTCCEEECCSSCCCCCG-G-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCCEEE
T ss_pred cCCccEEEccCCccccch-h-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCceeEEE
Confidence 356888888888887543 3 8888888888888888874 44 588888888888888888744 33 77888888888
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
+++|.....++ .+..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|+.|++++|.+.+
T Consensus 139 l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 139 LGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp CTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC
Confidence 88886554443 37888888888888888875443 7788888888888888885433 7778888888888888875
Q ss_pred CCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCC
Q 002174 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
. +. +..+++|+.|++++|.+++.++ +..+++|++|++++|.+++ ++......+|++|++++|.+++. ..+..+
T Consensus 214 ~--~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~-~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 214 I--TP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISD-INAVKDLTKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp C--GG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCC-CGGGTTCTTCCEEECCSSCCCCC--GGGGGC
T ss_pred C--ch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCC-ChhHhcCCCcCEEEccCCccCCC--hhhcCC
Confidence 2 22 7888888889998888887666 8888888999999988874 44444445888999999988865 457888
Q ss_pred CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcc
Q 002174 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 384 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~ 384 (956)
++|+.|+|++|++++..|..+..+.. |+.|+|++|++++++....++.+..+++++|++
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~-----L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTN-----LTTLFLSQNHITDIRPLASLSKMDSADFANQVI 345 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTT-----CSEEECCSSSCCCCGGGGGCTTCSEESSSCC--
T ss_pred CCCCEEECcCCcCCCcChhHhhcccc-----CCEEEccCCccccccChhhhhccceeehhhhcc
Confidence 88999999999888888777766544 558899999988887644688888888888875
No 289
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.7e-30 Score=281.76 Aligned_cols=255 Identities=17% Similarity=0.252 Sum_probs=133.3
Q ss_pred CCCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCC
Q 002174 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 140 (956)
+.|.|.|++|.|.+.... .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|
T Consensus 3 ~~C~C~~~~l~c~~~~l~------------------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n 62 (306)
T 2z66_A 3 SRCSCSGTEIRCNSKGLT------------------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSN 62 (306)
T ss_dssp TTCEEETTEEECCSSCCS------------------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCeeCCCEEEcCCCCcc------------------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCC
Confidence 568788999999764321 1222221 34555555555555222223455555555555555
Q ss_pred CCCC--CCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCc-cccCCccccceeccccccccCC
Q 002174 141 ELTG--SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLVHMLLDNNNLTGY 217 (956)
Q Consensus 141 ~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~L~~N~l~~~ 217 (956)
+++. ..+..+..+++|++|+|++|.++ .+|..+.++++|++|+|++|++++..+ ..+..+++|++|++++|++++.
T Consensus 63 ~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 141 (306)
T 2z66_A 63 GLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 141 (306)
T ss_dssp CCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEEC
T ss_pred ccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCcc
Confidence 5541 12344444555555555555554 344445555555555555555553332 3455555555555555555555
Q ss_pred CCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCCCC-
Q 002174 218 LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL- 295 (956)
Q Consensus 218 ~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 295 (956)
.+..|..+++|++|+|++|.+++...|..+..+++|+.|+|++|++++.++ .+..+++|++|+|++|++++..+..+.
T Consensus 142 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 221 (306)
T 2z66_A 142 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221 (306)
T ss_dssp STTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT
T ss_pred chhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC
Confidence 555555555555555555555432244555555555555555555555433 355555555556655555533332222
Q ss_pred ccccCEEEccCCcCCCCcchhcCCCC-cCCeEecccccCCCc
Q 002174 296 SLNITTIKLSNNKLTGTIPSNFSGLP-RLQRLFIANNSLSGS 336 (956)
Q Consensus 296 ~~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ 336 (956)
..+|+.|+|++|.+++..|..+..++ +|++|+|++|++++.
T Consensus 222 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 222 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 22566666666666666666666663 666666666666543
No 290
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=5.9e-30 Score=281.61 Aligned_cols=275 Identities=19% Similarity=0.216 Sum_probs=188.2
Q ss_pred CEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCC--CCccccccccCCeeecc
Q 002174 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS--LPKSFANLNKTRHFHMN 186 (956)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~ 186 (956)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|+++.. .+..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 46888888888 6776554 6899999999999855555678999999999999988732 36677788888888888
Q ss_pred cCcccCCCccccCCccccceeccccccccCCCC-cccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCcc
Q 002174 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (956)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (956)
+|.+. .+|..+..+++|++|++++|++++..+ ..+..+++|++|+|++|.+++ ..+..+.++++|+.|+|++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV-AFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEE-CSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCc-cchhhcccCcCCCEEECCCCcccc
Confidence 88888 466677888888888888888886554 467777777777777777765 456667777777777777777765
Q ss_pred --CCCCCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhh
Q 002174 266 --PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (956)
Q Consensus 266 --~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (956)
.+..+..+++|++|++++|++++..|..+.. .+|++|+|++|.+++..+..|..+++|+.|+|++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 3334666666666666666666443433322 2455555555555544444555555555555555555544443322
Q ss_pred hhccCCCCcceEEEccCCCCCCCCCCCCC-CCCcEEEecCCcccccCCcccccCCCCCCCcccccCCCCCCCcccC
Q 002174 343 QSRTLNATETFILDFQNNNLTNISGSFNI-PPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQ 417 (956)
Q Consensus 343 ~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~-~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 417 (956)
.+ +.+..|++++|||.|+|++.+|..|+...... ......+.|..|
T Consensus 245 ---------------------------~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~--~~~~~~~~C~~p 291 (306)
T 2z66_A 245 ---------------------------HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQL--LVEVERMECATP 291 (306)
T ss_dssp ---------------------------CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGG--BSCGGGCBEEES
T ss_pred ---------------------------hhhccCCEEEccCCCeecccChHHHHHHHHhhhhh--hccccccccCCc
Confidence 24 37789999999999999999998888644322 122345666653
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.96 E-value=5.5e-29 Score=300.87 Aligned_cols=153 Identities=20% Similarity=0.229 Sum_probs=141.5
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
..++.++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 46889999988 4666554 89999999999999888889999999999999999999888999999999999999999
Q ss_pred cccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccC-CCCcccCCcchhhhhcccCCcCCC
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG-YLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
++++..|..|+++++|++|+|++|++++..+..++++++|++|+|++|++++ .+|..|+++++|++|+|++|++++
T Consensus 91 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~ 167 (606)
T 3vq2_A 91 PIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT 167 (606)
T ss_dssp CCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE
T ss_pred cccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee
Confidence 9998889999999999999999999998888899999999999999999986 579999999999999999998765
No 292
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.96 E-value=8.5e-29 Score=282.21 Aligned_cols=272 Identities=20% Similarity=0.205 Sum_probs=194.0
Q ss_pred ccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCC
Q 002174 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (956)
Q Consensus 102 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (956)
-..+++|+.|++++|.++...+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..|..|.++++|+
T Consensus 41 ~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 120 (390)
T 3o6n_A 41 DITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLT 120 (390)
T ss_dssp SGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ccccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCC
Confidence 34578999999999999854445579999999999999999988888999999999999999999998899999999999
Q ss_pred eeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
+|+|++|+++...+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++. .+..+++|+.|++++|
T Consensus 121 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 121 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYN 196 (390)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC----CGGGCTTCSEEECCSS
T ss_pred EEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc----ccccccccceeecccc
Confidence 999999999965556679999999999999999998888999999999999999999863 3556677777777777
Q ss_pred CCccCCCC--C---------------CCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCC
Q 002174 262 SLQGPMPD--L---------------SRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (956)
Q Consensus 262 ~l~~~~~~--~---------------~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (956)
.+++.... + ...++|+.|++++|.+++. +......+|++|+|++|.+++..|..|.++++|+
T Consensus 197 ~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 275 (390)
T 3o6n_A 197 LLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLE 275 (390)
T ss_dssp CCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCC
T ss_pred cccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCC
Confidence 76652210 0 1123455555555555422 2222223555555555555555555555555555
Q ss_pred eEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCcc
Q 002174 325 RLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPF 384 (956)
Q Consensus 325 ~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~~~l~~l~l~~Np~ 384 (956)
.|+|++|++++ +|..+. ..++|+.|+|++|+++.++..+ .++.++.|++++|++
T Consensus 276 ~L~L~~n~l~~-~~~~~~-----~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 276 RLYISNNRLVA-LNLYGQ-----PIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp EEECCSSCCCE-EECSSS-----CCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCC
T ss_pred EEECCCCcCcc-cCcccC-----CCCCCCEEECCCCcceecCccccccCcCCEEECCCCcc
Confidence 55555555553 222221 1234445666666555555444 355555566655553
No 293
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=9.9e-29 Score=297.47 Aligned_cols=264 Identities=20% Similarity=0.197 Sum_probs=186.8
Q ss_pred cCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCe
Q 002174 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 103 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
-.+.+++.|++++|.++...+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 34789999999999999666666899999999999999999888889999999999999999999999999999999999
Q ss_pred eecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCC
Q 002174 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (956)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (956)
|+|++|.|++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|.+++. .+..+++|+.|++++|.
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYNL 203 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC----CGGGCTTCSEEECCSSC
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc----ChhhhhhhhhhhcccCc
Confidence 99999999977677789999999999999999999999999999999999999999863 25567778888888777
Q ss_pred CccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhh
Q 002174 263 LQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (956)
Q Consensus 263 l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (956)
+++.. ...+|+.|++++|.++. ++... ..+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|.
T Consensus 204 l~~l~----~~~~L~~L~ls~n~l~~-~~~~~-~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 204 LSTLA----IPIAVEELDASHNSINV-VRGPV-NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp CSEEE----CCTTCSEEECCSSCCCE-EECSC-CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred ccccc----CCchhheeeccCCcccc-ccccc-CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 76532 12344555555555442 11111 1244444444444443 23444444444444444444444444443
Q ss_pred hhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCc
Q 002174 343 QSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNP 383 (956)
Q Consensus 343 ~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~~~l~~l~l~~Np 383 (956)
.+.. |+.|+|++|+|++++... .++.+..|+|++|+
T Consensus 276 ~l~~-----L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~ 312 (597)
T 3oja_B 276 KMQR-----LERLYISNNRLVALNLYGQPIPTLKVLDLSHNH 312 (597)
T ss_dssp TCSS-----CCEEECTTSCCCEEECSSSCCTTCCEEECCSSC
T ss_pred CccC-----CCEEECCCCCCCCCCcccccCCCCcEEECCCCC
Confidence 3222 224444444444444333 24444444444444
No 294
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=7.1e-28 Score=279.46 Aligned_cols=278 Identities=17% Similarity=0.153 Sum_probs=185.6
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceee
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|+|++|++++. + ++.+++|++|+|++|++++. + ++++++|++|+|++|++++ +| ++.+++|++|++
T Consensus 64 ~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l 134 (457)
T 3bz5_A 64 TGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNC 134 (457)
T ss_dssp TTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEEC
Confidence 4566666666666653 2 66666666666666666642 2 6666666666666666664 33 666666666666
Q ss_pred ccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCC
Q 002174 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
++|++++. .++++++|++|++++|+..+.+ .+..+++|++|++++|++++. | +..+++|+.|++++|++++.
T Consensus 135 ~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~ 206 (457)
T 3bz5_A 135 ARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL 206 (457)
T ss_dssp TTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee
Confidence 66666653 2566666666666666544444 366677777777777777753 3 66677777777777777652
Q ss_pred CCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCcc--------ccCEEEccCCcCCCCc
Q 002174 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--------NITTIKLSNNKLTGTI 313 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--------~L~~L~Ls~N~l~~~~ 313 (956)
.++.+++|+.|++++|++++.+ +..+++|++|++++|++++..+...... +|+.|++++|.+.+.+
T Consensus 207 ----~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~ 280 (457)
T 3bz5_A 207 ----DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYF 280 (457)
T ss_dssp ----CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEE
T ss_pred ----ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcc
Confidence 3667777777777777777743 6677777777777777775433222111 3555566666655555
Q ss_pred chhcCCCCcCCeEecccccCCCcCChhhhhhccCC---CCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 002174 314 PSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN---ATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (956)
Q Consensus 314 p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~---~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~ 385 (956)
| ++++++|+.|+|++|++.+.+|.....+..+. .+.|+.|++++|+|++++ -..++.+..|++++|.+.
T Consensus 281 ~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l~-l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 281 Q--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTELD-VSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp E--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCCC-CTTCTTCSEEECCSSCCC
T ss_pred c--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccccc-cccCCcCcEEECCCCCCC
Confidence 5 46778888888888888888776554444443 356889999999999974 225888999999999865
No 295
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.96 E-value=2.8e-29 Score=299.67 Aligned_cols=171 Identities=14% Similarity=0.208 Sum_probs=147.0
Q ss_pred EEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccc
Q 002174 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYI 166 (956)
Q Consensus 87 L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 166 (956)
.+.++++++ .+|+.+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|++
T Consensus 10 c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 86 (549)
T 2z81_A 10 CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHL 86 (549)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCcc
Confidence 678888887 5666654 7999999999999988899999999999999999999998889999999999999999999
Q ss_pred cCCCCccccccccCCeeecccCcccC-CCccccCCccccceeccccccccCCC-CcccCCcchhhhhcccCCcCCCCCCc
Q 002174 167 SGSLPKSFANLNKTRHFHMNNNSISG-QIPPELSRLPSLVHMLLDNNNLTGYL-PPELSELPKLLILQLDNNNFEGTTIP 244 (956)
Q Consensus 167 ~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~N~l~~~~~p 244 (956)
++..+..|+++++|++|+|++|.+++ ..|..++++++|++|++++|++.+.+ +..|.++++|++|+|++|.+++ ..|
T Consensus 87 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~ 165 (549)
T 2z81_A 87 SSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRN-YQS 165 (549)
T ss_dssp CSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCE-ECT
T ss_pred CccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccc-cCh
Confidence 98888889999999999999999986 46788999999999999999954444 4689999999999999999987 566
Q ss_pred hhccCCCCCcEEeccCC
Q 002174 245 ASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 245 ~~~~~l~~L~~L~Ls~N 261 (956)
..+.++++|+.|++++|
T Consensus 166 ~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 166 QSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp TTTTTCSEEEEEEEECS
T ss_pred hhhhccccCceEecccC
Confidence 66655444444433333
No 296
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.96 E-value=4.3e-28 Score=283.12 Aligned_cols=277 Identities=25% Similarity=0.335 Sum_probs=160.9
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|+|++|.+.+..+ +.++++|++|+|++|.+++..+ ++++++|++|+|++|.+++..+ +.++++|++|+
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 140 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLE 140 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEE
Confidence 4578999999999887544 8999999999999999986544 8999999999999999986533 88899999999
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
|++|.+++. + .+.++++|++|+++ |.+.+.. .+.++++|++|++++|++++. ..+..+++|++|++++|.+++
T Consensus 141 l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 213 (466)
T 1o6v_A 141 LSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISD 213 (466)
T ss_dssp EEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred CCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccc
Confidence 999998853 3 35555555555554 3333221 155555555555555555532 234555555555555555543
Q ss_pred CCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCC
Q 002174 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
. .+ ++.+++|+.|++++|.+++. +.+..+++|+.|++++|.+++..+ .....+|+.|++++|.+++..+ +..+
T Consensus 214 ~-~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l 286 (466)
T 1o6v_A 214 I-TP--LGILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP--LAGL 286 (466)
T ss_dssp C-GG--GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG--GTTC
T ss_pred c-cc--ccccCCCCEEECCCCCcccc-hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc--ccCC
Confidence 1 11 44455555555555555443 234445555555555555553332 1122245555555555554333 4455
Q ss_pred CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcc
Q 002174 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPF 384 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~ 384 (956)
++|+.|+|++|++++..| +.. .++|+.|+|++|++++++....++.++.|++++|++
T Consensus 287 ~~L~~L~L~~n~l~~~~~--~~~-----l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l 343 (466)
T 1o6v_A 287 TALTNLELNENQLEDISP--ISN-----LKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKV 343 (466)
T ss_dssp TTCSEEECCSSCCSCCGG--GGG-----CTTCSEEECCSSCCSCCGGGGGCTTCCEEECCSSCC
T ss_pred CccCeEEcCCCcccCchh--hcC-----CCCCCEEECcCCcCCCchhhccCccCCEeECCCCcc
Confidence 555555555555554322 222 123345555555555444322344555555555543
No 297
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.95 E-value=5.6e-28 Score=282.15 Aligned_cols=284 Identities=23% Similarity=0.338 Sum_probs=152.9
Q ss_pred CcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccce
Q 002174 80 GYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (956)
Q Consensus 80 ~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 159 (956)
...+++.|++++|.+.+..+ ++++++|++|+|++|.+++. +. +.++++|++|+|++|.+++. + .+..+++|++|
T Consensus 88 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L 161 (466)
T 1o6v_A 88 NLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQL 161 (466)
T ss_dssp TCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEE
T ss_pred ccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEe
Confidence 34689999999999987654 99999999999999999964 43 89999999999999998853 3 35555555555
Q ss_pred eeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCC
Q 002174 160 QIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 160 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (956)
+++ |.+.+.. .+.++++|+.|++++|.+++. ..+..+++|++|++++|++++..+ +..+++|+.|++++|.++
T Consensus 162 ~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 234 (466)
T 1o6v_A 162 SFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLK 234 (466)
T ss_dssp EEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ecC-CcccCch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcc
Confidence 554 3333221 145555555555555555432 124445555555555555554332 344445555555555544
Q ss_pred CCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCC
Q 002174 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSG 319 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~ 319 (956)
+. ..+..+++|+.|++++|.+++.++ +..+++|+.|++++|.+++..+ .....+|+.|+|++|++++..+ +..
T Consensus 235 ~~---~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~ 307 (466)
T 1o6v_A 235 DI---GTLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISN 307 (466)
T ss_dssp CC---GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGG
T ss_pred cc---hhhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcC
Confidence 31 234444455555555555444333 4444445555555554443222 1122244444444444443322 444
Q ss_pred CCcCCeEecccccCCCcCChhhhhhccC-----------------CCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCC
Q 002174 320 LPRLQRLFIANNSLSGSIPSSIWQSRTL-----------------NATETFILDFQNNNLTNISGSFNIPPNVTVRLRGN 382 (956)
Q Consensus 320 l~~L~~L~L~~N~l~~~ip~~~~~l~~l-----------------~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~N 382 (956)
+++|+.|+|++|++++..| +..+..| ..++|+.|++++|++++++....++.+..|++++|
T Consensus 308 l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 308 LKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 385 (466)
T ss_dssp CTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCE
T ss_pred CCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCchhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCC
Confidence 4444444444444444333 2111111 12234455555555555443223555555555555
Q ss_pred ccc
Q 002174 383 PFC 385 (956)
Q Consensus 383 p~~ 385 (956)
+|.
T Consensus 386 ~~~ 388 (466)
T 1o6v_A 386 AWT 388 (466)
T ss_dssp EEE
T ss_pred ccc
Confidence 544
No 298
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.95 E-value=1.7e-27 Score=266.80 Aligned_cols=284 Identities=20% Similarity=0.296 Sum_probs=241.0
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|++.++.+... +.+..+++|++|+|++|++++ ++. +.++++|++|+|++|.++. + +.+..+++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~~--~~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVASI--QGIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCCC--TTGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCccccc--hhhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 35789999999998753 358999999999999999995 454 9999999999999999985 3 4699999999999
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
|++|.+++..+ +..+++|+.|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 99999995543 89999999999999977655544 8999999999999999996544 8899999999999999985
Q ss_pred CCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCC
Q 002174 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
++. +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ .....+|++|++++|.+++. ..+..+
T Consensus 192 --~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 192 --ISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp --CGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred --ccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 333 8899999999999999998766 8889999999999999995443 43445899999999999974 579999
Q ss_pred CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCC
Q 002174 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN 389 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~ 389 (956)
++|+.|++++|++++. ..+..+ ++|+.|++++|+++..+.. + .++.++.|++++|++.....
T Consensus 265 ~~L~~L~l~~n~l~~~--~~~~~l-----~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDI--SVLNNL-----SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGC-----TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCcCEEEccCCccCCC--hhhcCC-----CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC
Confidence 9999999999999964 334443 4567999999999977654 3 58999999999999876433
No 299
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.6e-30 Score=282.56 Aligned_cols=245 Identities=22% Similarity=0.258 Sum_probs=172.4
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCC-cccCCcccc-------CCcccchhhccCCCCCCCCCccc--C
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKI-SGSIPKEIG-------NIKSLELLLLNGNELTGSLPEEL--G 151 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~ 151 (956)
.+++.|++.+|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..+ .
T Consensus 43 ~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 43 RSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp EECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 3566677777777 566655544 77778887777 345666555 67778888888888877777765 7
Q ss_pred CCccccceeeccccccCCCCcccccc-----ccCCeeecccCcccCCCccccCCccccceeccccccccCC--CCccc--
Q 002174 152 YLPKLDRIQIDQNYISGSLPKSFANL-----NKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--LPPEL-- 222 (956)
Q Consensus 152 ~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~p~~l-- 222 (956)
.+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..|..|+.+++|++|+|++|++.+. .+..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 778888888888887766 7777766 7788888888888777777777788888888888877654 23333
Q ss_pred CCcchhhhhcccCCcCCCC-CCc-hhccCCCCCcEEeccCCCCccCCC--CCCCCCCccEEEccCCcCCCCCCCCCCccc
Q 002174 223 SELPKLLILQLDNNNFEGT-TIP-ASYSNMSKLLKLSLRNCSLQGPMP--DLSRIPNLGYLDLSSNQLNGSIPPGRLSLN 298 (956)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~-~~p-~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 298 (956)
..+++|++|+|++|++++. .++ ..+.++++|+.|+|++|++++.++ .+..+++|++|+|++|+|+ .+|.... .+
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~~ 275 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-AK 275 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-SE
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-CC
Confidence 6777777888888777631 111 334567777788888777777553 3556677777777777777 6666555 67
Q ss_pred cCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCC
Q 002174 299 ITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (956)
Q Consensus 299 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (956)
|++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 276 L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 276 LSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred ceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 77777777777765 44 7777777777777777764
No 300
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.3e-28 Score=267.95 Aligned_cols=235 Identities=17% Similarity=0.214 Sum_probs=138.5
Q ss_pred CCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeecccc-ccCCCCccccccccCCeee
Q 002174 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY-ISGSLPKSFANLNKTRHFH 184 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 184 (956)
++|++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. ++...+..|.++++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 456666666666665555556666666666666666665556666666666666666665 5544455666666666666
Q ss_pred cccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCc
Q 002174 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (956)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 264 (956)
|++|.+++..+..+.++++|++|+|++|++++..+..|..+++|++|+|++|++++ ..+..|.++++|+.|+|++|.++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISS-VPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccc-cCHHHhcCccccCEEECCCCccc
Confidence 66666665555666666666666666666665555556666666666666666653 23334666666666666666666
Q ss_pred cCCC-CCCCCCCccEEEccCCcCCCCCCCCCC-ccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhh
Q 002174 265 GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (956)
Q Consensus 265 ~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (956)
+..+ .+..+++|+.|++++|++++..+..+. ..+|+.|+|++|.+....+.. .-+..|+.+..+.|.+....|..+.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 6533 356666666666666666643322222 235666666666665433221 1112345555666777767776653
No 301
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=9.3e-28 Score=266.44 Aligned_cols=233 Identities=20% Similarity=0.320 Sum_probs=174.3
Q ss_pred CCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCee
Q 002174 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (956)
Q Consensus 104 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (956)
..++++.|+|++|+++ .+|..++++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..+.++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 3578888899888888 77888888888888888888888 78888888888888888888888 667778888888888
Q ss_pred ecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCC
Q 002174 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (956)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (956)
+|++|++.+.+|..+... ..+..|.++++|++|+|++|+++ .+|..+.++++|++|+|++|.+
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~--~lp~~l~~l~~L~~L~L~~N~l 218 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR--SLPASIANLQNLKSLKIRNSPL 218 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC--CCCGGGGGCTTCCEEEEESSCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC--cchHhhcCCCCCCEEEccCCCC
Confidence 888777776776654321 11223555666777777777765 4566666666666666666666
Q ss_pred ccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhh
Q 002174 264 QGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (956)
Q Consensus 264 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~ 343 (956)
++.++.+..+++ |++|+|++|.+.+.+|..|.++++|+.|+|++|++.+.+|..+..
T Consensus 219 ~~l~~~l~~l~~-----------------------L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~ 275 (328)
T 4fcg_A 219 SALGPAIHHLPK-----------------------LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHR 275 (328)
T ss_dssp CCCCGGGGGCTT-----------------------CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGG
T ss_pred CcCchhhccCCC-----------------------CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhc
Confidence 655544444444 555555555555677788899999999999999999999999877
Q ss_pred hccCCCCcceEEEccCCCCC-CCCCCC-CCCCCcEEEecCCcc
Q 002174 344 SRTLNATETFILDFQNNNLT-NISGSF-NIPPNVTVRLRGNPF 384 (956)
Q Consensus 344 l~~l~~~~L~~L~Ls~N~L~-~l~~~~-~~~~l~~l~l~~Np~ 384 (956)
+.. |+.|+|++|++. .+|..+ .++.+..+.+..|.+
T Consensus 276 l~~-----L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 276 LTQ-----LEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp CTT-----CCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred CCC-----CCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 655 569999998765 578777 589999999987764
No 302
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=8.2e-28 Score=261.63 Aligned_cols=237 Identities=17% Similarity=0.266 Sum_probs=154.7
Q ss_pred CEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccC
Q 002174 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (956)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (956)
++++++++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 67888888887 566544 357888888888887666667777777777777777777666777777777777777777
Q ss_pred c-ccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCC
Q 002174 189 S-ISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (956)
Q Consensus 189 ~-l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (956)
. +....+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++ ..+..|.++++|+.|+|++|++++.+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~ 169 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA-LPDDTFRDLGNLTHLFLHGNRISSVP 169 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc-cCHhHhccCCCccEEECCCCcccccC
Confidence 6 555556666666667766666666665555555555555555555555553 23333445555555555555444433
Q ss_pred CC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhcc
Q 002174 268 PD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (956)
Q Consensus 268 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~ 346 (956)
+. +..++ +|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..+..
T Consensus 170 ~~~~~~l~-----------------------~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~--- 223 (285)
T 1ozn_A 170 ERAFRGLH-----------------------SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAP--- 223 (285)
T ss_dssp TTTTTTCT-----------------------TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTT---
T ss_pred HHHhcCcc-----------------------ccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHccc---
Confidence 32 33333 4444555555555555667777777777777777777544444432
Q ss_pred CCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCcccccCCCCC
Q 002174 347 LNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSHSD 399 (956)
Q Consensus 347 l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~ 399 (956)
++.++.|++++|||.|+|.+.++..|+..
T Consensus 224 ------------------------l~~L~~L~l~~N~~~c~~~~~~~~~~l~~ 252 (285)
T 1ozn_A 224 ------------------------LRALQYLRLNDNPWVCDCRARPLWAWLQK 252 (285)
T ss_dssp ------------------------CTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred ------------------------CcccCEEeccCCCccCCCCcHHHHHHHHh
Confidence 45667888999999999999888777653
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=274.32 Aligned_cols=247 Identities=23% Similarity=0.285 Sum_probs=192.5
Q ss_pred CCCC--CCCceeecCCCC----CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchh
Q 002174 62 PCTS--NWTGVLCFNTTM----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELL 135 (956)
Q Consensus 62 ~c~~--~w~gv~C~~~~~----~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 135 (956)
.|.| .|..|.|..... .+....++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|
T Consensus 38 ~C~C~~~~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L 117 (440)
T 3zyj_A 38 VCSCSNQFSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 117 (440)
T ss_dssp SSEECTTSCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEE
T ss_pred CCEeCCCCCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEE
Confidence 3544 367899976432 2334678999999999999999999999999999999999998888899999999999
Q ss_pred hccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCc-ccCCCccccCCccccceeccccccc
Q 002174 136 LLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-ISGQIPPELSRLPSLVHMLLDNNNL 214 (956)
Q Consensus 136 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~L~~N~l 214 (956)
+|++|++++..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|. +....+..|.++++|++|+|++|++
T Consensus 118 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l 197 (440)
T 3zyj_A 118 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 197 (440)
T ss_dssp ECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCC
T ss_pred ECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcC
Confidence 999999997777889999999999999999998888899999999999999954 4444455788999999999999998
Q ss_pred cCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCC
Q 002174 215 TGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPG 293 (956)
Q Consensus 215 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 293 (956)
+. +| .+..+++|+.|+|++|++++ ..|..|.++++|+.|+|++|++++..+. |..+++|+.|+|++|+|
T Consensus 198 ~~-~~-~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l------- 267 (440)
T 3zyj_A 198 RE-IP-NLTPLIKLDELDLSGNHLSA-IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL------- 267 (440)
T ss_dssp SS-CC-CCTTCSSCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCC-------
T ss_pred cc-cc-ccCCCcccCEEECCCCccCc-cChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCC-------
Confidence 84 33 46667777777777777765 4556666666666666666666665443 55555555555555555
Q ss_pred CCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCC
Q 002174 294 RLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (956)
Q Consensus 294 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (956)
++..+..|..+++|+.|+|++|.+.
T Consensus 268 ----------------~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 268 ----------------TLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp ----------------CCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ----------------CccChhHhccccCCCEEEcCCCCcc
Confidence 4445556667777777777777764
No 304
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=1.5e-27 Score=284.82 Aligned_cols=285 Identities=26% Similarity=0.319 Sum_probs=230.7
Q ss_pred CCCCCCCCCCCCCCCceeecCCCC-CCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCccc
Q 002174 54 LSNWNRGDPCTSNWTGVLCFNTTM-DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (956)
Q Consensus 54 l~~W~~~~~c~~~w~gv~C~~~~~-~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 132 (956)
+++|....+|| .|+|..|..... ......++.|++++++|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|
T Consensus 12 w~~W~~~~~~~-~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L 83 (622)
T 3g06_A 12 WSAWRRAAPAE-ESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPEL 83 (622)
T ss_dssp HHHHHHTCCGG-GHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTC
T ss_pred HHHHHhcCCcc-hhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCC
Confidence 45687666665 687643311000 000124789999999998 7787776 89999999999999 5776 57899
Q ss_pred chhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccc
Q 002174 133 ELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (956)
Q Consensus 133 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 212 (956)
++|+|++|+|+ .+|. .+++|++|+|++|+|++. |. .+++|+.|+|++|+|++ +|.. +++|++|+|++|
T Consensus 84 ~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N 151 (622)
T 3g06_A 84 RTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDN 151 (622)
T ss_dssp CEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCC
Confidence 99999999999 5665 779999999999999954 44 67899999999999995 5654 489999999999
Q ss_pred cccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCC
Q 002174 213 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 292 (956)
Q Consensus 213 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 292 (956)
++++ +|. .+++|+.|++++|.+++ +| ..+++|+.|+|++|.+++.+.. +++|+.|++++|.++ .+|.
T Consensus 152 ~l~~-l~~---~~~~L~~L~L~~N~l~~--l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~-~l~~ 218 (622)
T 3g06_A 152 QLAS-LPA---LPSELCKLWAYNNQLTS--LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPA 218 (622)
T ss_dssp CCSC-CCC---CCTTCCEEECCSSCCSC--CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCS-SCCC
T ss_pred cCCC-cCC---ccCCCCEEECCCCCCCC--Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccc-ccCC
Confidence 9996 443 34689999999999985 45 5678999999999999986653 478999999999999 5665
Q ss_pred CCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CC
Q 002174 293 GRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NI 371 (956)
Q Consensus 293 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~ 371 (956)
. ..+|+.|+|++|.|++ +| ..+++|+.|+|++|+|+ .+|. ..++|+.|+|++|+|+.+|..+ .+
T Consensus 219 ~--~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~--------~~~~L~~L~Ls~N~L~~lp~~l~~l 283 (622)
T 3g06_A 219 L--PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM--------LPSGLLSLSVYRNQLTRLPESLIHL 283 (622)
T ss_dssp C--CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC--------CCTTCCEEECCSSCCCSCCGGGGGS
T ss_pred C--CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc--------ccccCcEEeCCCCCCCcCCHHHhhc
Confidence 3 3589999999999996 55 56789999999999999 4665 2356789999999999999877 58
Q ss_pred CCCcEEEecCCcccc
Q 002174 372 PPNVTVRLRGNPFCL 386 (956)
Q Consensus 372 ~~l~~l~l~~Np~~c 386 (956)
+.+..|+|++|++..
T Consensus 284 ~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 284 SSETTVNLEGNPLSE 298 (622)
T ss_dssp CTTCEEECCSCCCCH
T ss_pred cccCEEEecCCCCCC
Confidence 999999999999875
No 305
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.5e-27 Score=274.22 Aligned_cols=244 Identities=20% Similarity=0.244 Sum_probs=215.4
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
..++..+.+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 45778888887 4666554 68999999999999988999999999999999999999988999999999999999999
Q ss_pred cccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccc-ccccCCCCcccCCcchhhhhcccCCcCCCCCC
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (956)
+|++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++ |.+....+..|.++++|++|+|++|++++ +
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~--~ 211 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD--M 211 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS--C
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc--c
Confidence 99988888899999999999999999977777999999999999999 55555555579999999999999999985 3
Q ss_pred chhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCC
Q 002174 244 PASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLP 321 (956)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (956)
| .+..+++|+.|+|++|.+++..+. |..+++|+.|+|++|++++..+..+.. .+|+.|+|++|+|++..+..|..++
T Consensus 212 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 212 P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 4 588999999999999999998764 899999999999999999766665543 3899999999999988888888999
Q ss_pred cCCeEecccccCC
Q 002174 322 RLQRLFIANNSLS 334 (956)
Q Consensus 322 ~L~~L~L~~N~l~ 334 (956)
+|+.|+|++|.+.
T Consensus 291 ~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 291 YLVELHLHHNPWN 303 (452)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEccCCCcC
Confidence 9999999999876
No 306
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.94 E-value=9.3e-27 Score=282.62 Aligned_cols=176 Identities=18% Similarity=0.221 Sum_probs=139.9
Q ss_pred CCCCCCCCCCCCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcc
Q 002174 52 SKLSNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKS 131 (956)
Q Consensus 52 ~~l~~W~~~~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 131 (956)
..+++|+..-|.+ |+.-.|... -...+-++.+|+ .+|..+. +++++|||++|+|++..+.+|.++++
T Consensus 11 ~~~~~~~~~~p~~--~~~c~~~~~--------~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~ 77 (635)
T 4g8a_A 11 DKLAAANSSIPES--WEPCVEVVP--------NITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPE 77 (635)
T ss_dssp ----------------CCSEEEET--------TTEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred chhhcccCCCCCC--CCCccccCC--------CCEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCC
Confidence 3466676655543 655444321 123566677777 5666553 47999999999999877889999999
Q ss_pred cchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccc
Q 002174 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (956)
Q Consensus 132 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 211 (956)
|++|||++|+|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|++|+|++
T Consensus 78 L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~ 157 (635)
T 4g8a_A 78 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 157 (635)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecccc
Confidence 99999999999988888999999999999999999988888899999999999999999987778899999999999999
Q ss_pred ccccCC-CCcccCCcchhhhhcccCCcCCC
Q 002174 212 NNLTGY-LPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 212 N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
|++++. .|..+..+++|++|+|++|++++
T Consensus 158 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CccccCCCchhhccchhhhhhcccCccccc
Confidence 999864 67888999999999999998864
No 307
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.94 E-value=8.5e-28 Score=270.05 Aligned_cols=256 Identities=18% Similarity=0.157 Sum_probs=209.1
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 51 ~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 130 (353)
T 2z80_A 51 TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLN 130 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEE
T ss_pred cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEE
Confidence 35899999999999987777999999999999999999988888999999999999999999966556699999999999
Q ss_pred eccccccCCCC-ccccccccCCeeecccC-cccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcC
Q 002174 161 IDQNYISGSLP-KSFANLNKTRHFHMNNN-SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNF 238 (956)
Q Consensus 161 Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 238 (956)
|++|++++..+ ..|.++++|++|++++| .+....+..|.++++|++|++++|++++..|..|..+++|++|++++|.+
T Consensus 131 L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 131 LLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQH 210 (353)
T ss_dssp CTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCS
T ss_pred CCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcc
Confidence 99999995544 47999999999999999 47766678899999999999999999999999999999999999999999
Q ss_pred CCCCCch-hccCCCCCcEEeccCCCCccCCCC----CCCCCCccEEEccCCcCCCC----CCCCCC-ccccCEEEccCCc
Q 002174 239 EGTTIPA-SYSNMSKLLKLSLRNCSLQGPMPD----LSRIPNLGYLDLSSNQLNGS----IPPGRL-SLNITTIKLSNNK 308 (956)
Q Consensus 239 ~~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~----~~~l~~L~~L~Ls~N~l~~~----~p~~~~-~~~L~~L~Ls~N~ 308 (956)
+. +|. .+..+++|+.|+|++|.+++..+. ......++.+++++|.+++. +|..+. ..+|+.|+|++|+
T Consensus 211 ~~--~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~ 288 (353)
T 2z80_A 211 IL--LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQ 288 (353)
T ss_dssp TT--HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSC
T ss_pred cc--chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCC
Confidence 74 444 456799999999999999986543 33456777888888777642 232222 2267777777777
Q ss_pred CCCCcchhcCCCCcCCeEecccccCCCcCC
Q 002174 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIP 338 (956)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip 338 (956)
|+...+..|.++++|++|+|++|++.+..|
T Consensus 289 l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 289 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 774333335677777777777777776544
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=8.8e-29 Score=272.95 Aligned_cols=248 Identities=20% Similarity=0.269 Sum_probs=129.2
Q ss_pred cCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCC-CCCCCcccC-------CCccccceeeccccccCCCCccc
Q 002174 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNEL-TGSLPEELG-------YLPKLDRIQIDQNYISGSLPKSF 174 (956)
Q Consensus 103 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~ 174 (956)
+..++|+.|++++|.+ .+|..+... |+.|+|++|++ .+.+|..+. ++++|++|+|++|++++.+|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 4445566666666666 455555443 66666666666 334444443 45666666666666665555554
Q ss_pred --cccccCCeeecccCcccCCCccccCCc-----cccceeccccccccCCCCcccCCcchhhhhcccCCcCCCC-CCchh
Q 002174 175 --ANLNKTRHFHMNNNSISGQIPPELSRL-----PSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT-TIPAS 246 (956)
Q Consensus 175 --~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~p~~ 246 (956)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|..+++|++|+|++|++.+. ..+..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 5566666666666666644 5555544 5566666666666555555555555566666665555431 01222
Q ss_pred c--cCCCCCcEEeccCCCCccCCC---C-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCC
Q 002174 247 Y--SNMSKLLKLSLRNCSLQGPMP---D-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 247 ~--~~l~~L~~L~Ls~N~l~~~~~---~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
+ .++++|++|+|++|++++.+. . +..+++|++|+|++|++++.+|. ..+..+
T Consensus 195 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~----------------------~~~~~l 252 (312)
T 1wwl_A 195 LCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGA----------------------PSCDWP 252 (312)
T ss_dssp SCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCC----------------------SCCCCC
T ss_pred HHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccch----------------------hhhhhc
Confidence 2 455555555555555553211 1 23444555555555555543322 233344
Q ss_pred CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 002174 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~ 385 (956)
++|+.|+|++|+|+ .+|..+. ++|+.|||++|+|+++|.-..++.++.|++++|++.
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~-------~~L~~L~Ls~N~l~~~p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP-------AKLSVLDLSYNRLDRNPSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC-------SEEEEEECCSSCCCSCCCTTTSCEEEEEECTTCTTT
T ss_pred CCCCEEECCCCccC-hhhhhcc-------CCceEEECCCCCCCCChhHhhCCCCCEEeccCCCCC
Confidence 55555555555555 4444332 334455555555555544223555555556555553
No 309
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=3.2e-27 Score=273.77 Aligned_cols=268 Identities=25% Similarity=0.338 Sum_probs=204.9
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCccc-------------chhhccCCCCCCCCCc
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL-------------ELLLLNGNELTGSLPE 148 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~ 148 (956)
.+++.|+++++++ |.+|++|++|++|++|+|++|+++|.+|..++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 4789999999999 8999999999999999999999999999999999876 999999999995 454
Q ss_pred ccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchh
Q 002174 149 ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKL 228 (956)
Q Consensus 149 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 228 (956)
. .++|++|++++|++++ +|.. +++|++|++++|++++ ++.. .++|++|++++|++++ +| .|+.+++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 2 3789999999999997 6653 4789999999999985 3332 2699999999999997 66 69999999
Q ss_pred hhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCc
Q 002174 229 LILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (956)
Q Consensus 229 ~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~ 308 (956)
++|++++|++++ +|.. ..+|++|++++|++++.+ .+..+++|++|++++|++++ +|... .+|++|++++|.
T Consensus 156 ~~L~l~~N~l~~--lp~~---~~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~-l~~~~--~~L~~L~l~~n~ 226 (454)
T 1jl5_A 156 KIIDVDNNSLKK--LPDL---PPSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK-LPDLP--LSLESIVAGNNI 226 (454)
T ss_dssp CEEECCSSCCSC--CCCC---CTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS-CCCCC--TTCCEEECCSSC
T ss_pred CEEECCCCcCcc--cCCC---cccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc-CCCCc--CcccEEECcCCc
Confidence 999999999985 4544 358999999999999854 79999999999999999985 55433 489999999999
Q ss_pred CCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccc
Q 002174 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c 386 (956)
++ .+| .|.++++|+.|++++|++++ +|.. ..+|+.|++++|+++++|.. .+.++.+++++|.+..
T Consensus 227 l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~--------~~~L~~L~l~~N~l~~l~~~--~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 227 LE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL--------PPSLEALNVRDNYLTDLPEL--PQSLTFLDVSENIFSG 291 (454)
T ss_dssp CS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC--------CTTCCEEECCSSCCSCCCCC--CTTCCEEECCSSCCSE
T ss_pred CC-ccc-ccCCCCCCCEEECCCCcCCc-cccc--------ccccCEEECCCCcccccCcc--cCcCCEEECcCCccCc
Confidence 99 667 49999999999999999985 5542 24677899999999887764 3678888888887653
No 310
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.3e-28 Score=292.33 Aligned_cols=183 Identities=18% Similarity=0.107 Sum_probs=128.7
Q ss_pred eeeeCCeeEEEEE-eCCCcEEEEEEecCCC----------hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEE
Q 002174 632 IGQGGYGKVYKGI-LPDGTVVAVKRAQEGS----------LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 632 lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.+.|+.|.+..++ .--|+.||||++.... ....++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4566666666554 2358889999986532 12235799999999999 6999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002174 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||++|++|.+++.+.+ +++.. +|+.||+.||+|+|++| ||||||||+|||++++|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 9999999999997654 35443 58999999999999999 9999999999999999999999999998764321
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHhCCC
Q 002174 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQ 830 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~elltg~~ 830 (956)
.......||++|+|||++.+. +..++|+||+|++++++.++..
T Consensus 394 -------~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~ 436 (569)
T 4azs_A 394 -------SWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWS 436 (569)
T ss_dssp -------CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred -------ccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccc
Confidence 223456799999999999764 5778999999999888766543
No 311
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.94 E-value=1e-25 Score=261.07 Aligned_cols=264 Identities=27% Similarity=0.317 Sum_probs=143.5
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceee
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|++++|.+++ +|.. +++|++|+|++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|++
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 456777777777776 4432 2566666666666653 2211 1466666666666664 45 3666666666666
Q ss_pred ccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCC
Q 002174 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++ +|... ++|++|++++|.++
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~-- 228 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE-- 228 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS--
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC--
Confidence 6666663 34332 356666666666664 34 45666666666666666664 23222 35666666666665
Q ss_pred CCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCC--Ccchh---
Q 002174 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTG--TIPSN--- 316 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~--~~p~~--- 316 (956)
.+| .+..+++|++|++++|++++.+.. +++|+.|++++|++++ +|... .+|+.|++++|++++ ..|..
T Consensus 229 ~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~~--~~L~~L~ls~N~l~~l~~~~~~L~~ 301 (454)
T 1jl5_A 229 ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPELP--QSLTFLDVSENIFSGLSELPPNLYY 301 (454)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCSEESCCCTTCCE
T ss_pred ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCccc--CcCCEEECcCCccCcccCcCCcCCE
Confidence 234 255666666666666666554321 2455555555555553 33321 345555555555554 11110
Q ss_pred ----------cCCC-CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 002174 317 ----------FSGL-PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (956)
Q Consensus 317 ----------~~~l-~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~ 385 (956)
+..+ ++|+.|++++|++++ +|.. .+.|+.|++++|+++.+|. .++.++.|++++|++.
T Consensus 302 L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~~--------~~~L~~L~L~~N~l~~lp~--~l~~L~~L~L~~N~l~ 370 (454)
T 1jl5_A 302 LNASSNEIRSLCDLPPSLEELNVSNNKLIE-LPAL--------PPRLERLIASFNHLAEVPE--LPQNLKQLHVEYNPLR 370 (454)
T ss_dssp EECCSSCCSEECCCCTTCCEEECCSSCCSC-CCCC--------CTTCCEEECCSSCCSCCCC--CCTTCCEEECCSSCCS
T ss_pred EECcCCcCCcccCCcCcCCEEECCCCcccc-cccc--------CCcCCEEECCCCccccccc--hhhhccEEECCCCCCC
Confidence 1122 355666666666554 3432 1345566666666666655 3456666666666654
No 312
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=1.6e-26 Score=267.97 Aligned_cols=275 Identities=21% Similarity=0.180 Sum_probs=226.9
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|+++++++++. | .++.+++|++|+|++|++++ +| ++++++|++|+|++|++++. + ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 35799999999999975 4 79999999999999999996 44 89999999999999999975 4 89999999999
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
|++|++++. + ++++++|++|++++|++++. .++.+++|++|++++|+..+.+ .+..+++|+.|++++|++++
T Consensus 113 L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 999999974 4 89999999999999999974 3889999999999999766565 58889999999999999986
Q ss_pred CCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCC
Q 002174 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
+| +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| .....+|+.|++++|++++..+..+.+|
T Consensus 185 --l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N~l~~~~~~~l~~L 256 (457)
T 3bz5_A 185 --LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVNPLTELDVSTLSKL 256 (457)
T ss_dssp --CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSSCCSCCCCTTCTTC
T ss_pred --ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCCcCCCcCHHHCCCC
Confidence 34 88899999999999999987 48899999999999999996 66 3334589999999999998876666666
Q ss_pred C-------cCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCC-CCCCC--------C-CCCCCcEEEecCCc
Q 002174 321 P-------RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT-NISGS--------F-NIPPNVTVRLRGNP 383 (956)
Q Consensus 321 ~-------~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~-~l~~~--------~-~~~~l~~l~l~~Np 383 (956)
. +|+.|++++|++.|.+|. . ..++|+.|++++|.+. .+|.. + ..+.+..|++++|.
T Consensus 257 ~~L~l~~n~L~~L~l~~n~~~~~~~~--~-----~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~ 329 (457)
T 3bz5_A 257 TTLHCIQTDLLEIDLTHNTQLIYFQA--E-----GCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTE 329 (457)
T ss_dssp CEEECTTCCCSCCCCTTCTTCCEEEC--T-----TCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCC
T ss_pred CEEeccCCCCCEEECCCCccCCcccc--c-----ccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCc
Confidence 5 567777777777777763 2 2356678999998643 23321 2 35677778888877
Q ss_pred ccc
Q 002174 384 FCL 386 (956)
Q Consensus 384 ~~c 386 (956)
+..
T Consensus 330 l~~ 332 (457)
T 3bz5_A 330 LTE 332 (457)
T ss_dssp CSC
T ss_pred ccc
Confidence 543
No 313
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=7.6e-28 Score=281.68 Aligned_cols=229 Identities=24% Similarity=0.218 Sum_probs=186.6
Q ss_pred cCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCe
Q 002174 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 103 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.|++.. ..++|+.
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~ 103 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIET 103 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCE
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCE
Confidence 344589999999999998888889999999999999999987665 889999999999999988433 3388999
Q ss_pred eecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhcc-CCCCCcEEeccCC
Q 002174 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS-NMSKLLKLSLRNC 261 (956)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~-~l~~L~~L~Ls~N 261 (956)
|+|++|.|++..+. .+++|+.|+|++|++++..|..|+.+++|+.|+|++|.+++ ..|..+. .+++|+.|+|++|
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~l~~~l~~L~~L~Ls~N 179 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-VNFAELAASSDTLEHLNLQYN 179 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE-EEGGGGGGGTTTCCEEECTTS
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC-cChHHHhhhCCcccEEecCCC
Confidence 99999999876654 35789999999999998888889999999999999999987 4666665 7899999999999
Q ss_pred CCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCC-CcCChh
Q 002174 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS-GSIPSS 340 (956)
Q Consensus 262 ~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~ip~~ 340 (956)
.+++.++ +..+++|++|+|++|.|++..|......+|+.|+|++|.|++ +|..+..+++|+.|+|++|.+. +.+|..
T Consensus 180 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~ 257 (487)
T 3oja_A 180 FIYDVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (487)
T ss_dssp CCCEEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHH
T ss_pred ccccccc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHH
Confidence 9988744 445889999999999998655543333478888888888885 6777888888888888888887 556665
Q ss_pred hhhh
Q 002174 341 IWQS 344 (956)
Q Consensus 341 ~~~l 344 (956)
+..+
T Consensus 258 ~~~l 261 (487)
T 3oja_A 258 FSKN 261 (487)
T ss_dssp HTTC
T ss_pred HHhC
Confidence 5443
No 314
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=7.2e-27 Score=252.93 Aligned_cols=233 Identities=18% Similarity=0.213 Sum_probs=122.6
Q ss_pred CCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeec
Q 002174 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (956)
++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35666666666666555555666666666666666666555555555555555555555555444445555555555555
Q ss_pred ccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCcc
Q 002174 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (956)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (956)
++|.+.+..+ ..+..+++|++|+|++|.+++..+|..+.++++|+.|+|++|++++
T Consensus 108 ~~n~l~~~~~------------------------~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLEN------------------------FPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTT------------------------CCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCCccccCc------------------------hhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 5555544333 3444444444555555554433345555555555555555555554
Q ss_pred CCCC-CCCCCCcc----EEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChh
Q 002174 266 PMPD-LSRIPNLG----YLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340 (956)
Q Consensus 266 ~~~~-~~~l~~L~----~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 340 (956)
.++. +..+++|+ .|++++|.++ +..+..+.. .+|+.|+|++|++++..+..
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~-----------------------~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~ 219 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMN-----------------------FIQPGAFKE-IRLKELALDTNQLKSVPDGI 219 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCC-----------------------EECTTSSCS-CCEEEEECCSSCCSCCCTTT
T ss_pred CCHHHhhhhhhccccceeeecCCCccc-----------------------ccCccccCC-CcccEEECCCCceeecCHhH
Confidence 4331 22222222 4444444444 222222222 24555555555555332222
Q ss_pred hhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCC-cccccCCCCCCCcccccCCCCCCCcccC
Q 002174 341 IWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNEIDRSTNSTLDCRAQ 417 (956)
Q Consensus 341 ~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~-~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 417 (956)
+. .++.++.|++++|||.|+|+ +.+++.|....... ......|..+
T Consensus 220 ~~---------------------------~l~~L~~L~l~~N~~~c~c~~l~~l~~~~~~~~~~----~~~~~~C~~~ 266 (276)
T 2z62_A 220 FD---------------------------RLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQK----EQGSAKCSGS 266 (276)
T ss_dssp TT---------------------------TCCSCCEEECCSSCBCCCTTTTHHHHHHHHHTGGG----BCSCCBBTTT
T ss_pred hc---------------------------ccccccEEEccCCcccccCCchHHHHHHHHhcccc----cCCCceeeCC
Confidence 21 14455677788889999995 67777887544332 2233466654
No 315
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=7e-26 Score=246.66 Aligned_cols=219 Identities=21% Similarity=0.254 Sum_probs=131.0
Q ss_pred cCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhh
Q 002174 150 LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 229 (956)
Q Consensus 150 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 229 (956)
++++++|+++++++|+++ .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|+|++..+ ...+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCC
Confidence 455666666777766666 3443332 456666666666665555566666666666666666654322 14455555
Q ss_pred hhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCc
Q 002174 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (956)
Q Consensus 230 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~ 308 (956)
+|+|++|+++ .+|..+.++++|+.|+|++|++++.++. |..+++ |++|+|++|+
T Consensus 81 ~L~Ls~N~l~--~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~-----------------------L~~L~L~~N~ 135 (290)
T 1p9a_G 81 TLDLSHNQLQ--SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGE-----------------------LQELYLKGNE 135 (290)
T ss_dssp EEECCSSCCS--SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTT-----------------------CCEEECTTSC
T ss_pred EEECCCCcCC--cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCC-----------------------CCEEECCCCC
Confidence 5555555554 2444444555555555555555544432 444444 5555555555
Q ss_pred CCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCccccc
Q 002174 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLN 387 (956)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-~~~~l~~l~l~~Np~~c~ 387 (956)
|++..+..|..+++|+.|+|++|+|++..+..|..+ ++|+.|+|++|+|+.+|..+ ..+.+..++|++|||.|+
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l-----~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGL-----ENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTC-----TTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCc-----CCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCc
Confidence 555555556666666666666666664333333333 33446777777777666654 466788999999999999
Q ss_pred CCcccccCCCCCCCcc
Q 002174 388 TNAEQFCGSHSDDDNE 403 (956)
Q Consensus 388 c~~~~~~~~~~~~~~~ 403 (956)
|++.+|..|+..+...
T Consensus 211 c~~~~l~~wl~~~~~~ 226 (290)
T 1p9a_G 211 CEILYFRRWLQDNAEN 226 (290)
T ss_dssp GGGHHHHHHHHHTGGG
T ss_pred CccHHHHHHHHhCccc
Confidence 9999999898765543
No 316
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.1e-27 Score=262.60 Aligned_cols=258 Identities=22% Similarity=0.198 Sum_probs=207.0
Q ss_pred eeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeec
Q 002174 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (956)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (956)
.+..++++++++...+...+..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ +..+++|++|+|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 45556677777765555566778899999999999998878889999999999999999986654 8999999999999
Q ss_pred cccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCC
Q 002174 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (956)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 242 (956)
+|++++.. ..++|++|++++|++++..+.. +++|++|+|++|++++..+..+..+++|++|+|++|.+++ .
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~ 159 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT-V 159 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE-E
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc-c
Confidence 99998432 4489999999999998665543 5789999999999998888889999999999999999986 3
Q ss_pred Cchhc-cCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCC
Q 002174 243 IPASY-SNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (956)
Q Consensus 243 ~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (956)
.+..+ ..+++|++|+|++|.+++.+ ....+++|++|+|++|+|++..+......+|+.|+|++|+|+ .+|..+..++
T Consensus 160 ~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 160 NFAELAASSDTLEHLNLQYNFIYDVK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred cHHHHhhccCcCCEEECCCCcCcccc-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 45555 57899999999999998874 344588999999999999854444223348999999999998 5678888999
Q ss_pred cCCeEecccccCC-CcCChhhhhhccCCCCcceEEEcc
Q 002174 322 RLQRLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQ 358 (956)
Q Consensus 322 ~L~~L~L~~N~l~-~~ip~~~~~l~~l~~~~L~~L~Ls 358 (956)
+|+.|+|++|++. +.+|..+..+.. |+.|+++
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~-----L~~l~l~ 270 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQR-----VQTVAKQ 270 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHH-----HHHHHHH
T ss_pred CCCEEEccCCCccCcCHHHHHhcccc-----ceEEECC
Confidence 9999999999998 667776665443 3355555
No 317
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=5.6e-25 Score=237.21 Aligned_cols=212 Identities=21% Similarity=0.271 Sum_probs=167.6
Q ss_pred CCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCC
Q 002174 66 NWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGS 145 (956)
Q Consensus 66 ~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 145 (956)
.|.|+.|... ...+.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++..
T Consensus 6 ~~~~~~C~c~------~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i 76 (270)
T 2o6q_A 6 KKDGGVCSCN------NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTL 76 (270)
T ss_dssp GGGTCSBEEE------TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCC
T ss_pred CCCCCCCEeC------CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCee
Confidence 5999999543 135678899988884 666554 6789999999999876667888999999999999999866
Q ss_pred CCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCc
Q 002174 146 LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSEL 225 (956)
Q Consensus 146 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 225 (956)
.+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+
T Consensus 77 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 77 PAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp CTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 66667888899999999998887777778888888888888888887777778888888888888888887666667788
Q ss_pred chhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCC
Q 002174 226 PKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 226 ~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~ 287 (956)
++|+.|+|++|++++ ..+..|.++++|+.|+|++|++++.++. +..+++|+.|+|++|.+.
T Consensus 157 ~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 157 TSLKELRLYNNQLKR-VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccceeEecCCcCcE-eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 888888888888875 3445677777888888888877776664 666777777777777765
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.92 E-value=4.8e-27 Score=259.69 Aligned_cols=245 Identities=20% Similarity=0.209 Sum_probs=213.9
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|+|++|.+++..+..|.++++|++|+|++|++++..+ |..+++|++|+|++|++++.. ..++|++|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEE
Confidence 3479999999999999888899999999999999999997554 999999999999999998432 348999999
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCccc-CCcchhhhhcccCCcCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL-SELPKLLILQLDNNNFE 239 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~L~~L~Ls~N~l~ 239 (956)
+++|++++..+.. +++|++|+|++|++++..+..+..+++|++|+|++|++++..+..+ ..+++|++|+|++|.++
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 9999999665543 6789999999999998888899999999999999999998877777 47899999999999998
Q ss_pred CCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCC-CCcchhc
Q 002174 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLT-GTIPSNF 317 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~-~~~p~~~ 317 (956)
+ ++ ....+++|+.|+|++|++++.++.+..+++|+.|+|++|+|+ .+|..+.. .+|+.|+|++|.++ +..|..+
T Consensus 183 ~--~~-~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~ 258 (317)
T 3o53_A 183 D--VK-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (317)
T ss_dssp E--EE-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHH
T ss_pred c--cc-cccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHH
Confidence 5 33 334589999999999999999888999999999999999999 56665443 48999999999999 7889999
Q ss_pred CCCCcCCeEecc-cccCCCcCCh
Q 002174 318 SGLPRLQRLFIA-NNSLSGSIPS 339 (956)
Q Consensus 318 ~~l~~L~~L~L~-~N~l~~~ip~ 339 (956)
..+++|+.|+++ .+.++|..|.
T Consensus 259 ~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 259 SKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp HTCHHHHHHHHHHHHHHHSSSSC
T ss_pred hccccceEEECCCchhccCCchh
Confidence 999999999999 4456665554
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=2.2e-26 Score=269.35 Aligned_cols=235 Identities=21% Similarity=0.207 Sum_probs=210.0
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|+|++|++++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.|++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 4589999999999999888899999999999999999997665 999999999999999998543 338999999
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccC-CcchhhhhcccCCcCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELS-ELPKLLILQLDNNNFE 239 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~ 239 (956)
|++|.|++..+. .+++|+.|+|++|.+++..|..++.+++|++|+|++|.+++..|..+. .+++|+.|+|++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999976654 457899999999999999899999999999999999999998888886 7999999999999998
Q ss_pred CCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCC-ccccCEEEccCCcCC-CCcchhc
Q 002174 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLT-GTIPSNF 317 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~Ls~N~l~-~~~p~~~ 317 (956)
+. + .+..+++|+.|+|++|.+++.++.+..+++|+.|+|++|.|++ +|..+. ..+|+.|+|++|.+. +.+|..+
T Consensus 183 ~~--~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DV--K-GQVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EE--E-CCCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred cc--c-ccccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 63 3 3446999999999999999999889999999999999999995 665544 358999999999998 7788999
Q ss_pred CCCCcCCeEecc
Q 002174 318 SGLPRLQRLFIA 329 (956)
Q Consensus 318 ~~l~~L~~L~L~ 329 (956)
..++.|+.|+++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 999999999886
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=4.4e-25 Score=238.83 Aligned_cols=226 Identities=19% Similarity=0.222 Sum_probs=178.0
Q ss_pred CCCCCCCC--ceeecCCCC---C-CCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccch
Q 002174 61 DPCTSNWT--GVLCFNTTM---D-DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLEL 134 (956)
Q Consensus 61 ~~c~~~w~--gv~C~~~~~---~-~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 134 (956)
|+|.+.+. .+.|.+... + ....+++.|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++
T Consensus 1 ~~C~~~~~~~~~~c~~~~l~~ip~~l~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 80 (276)
T 2z62_A 1 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 80 (276)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceeccCCceEEecCCCccccCCCCCCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCE
Confidence 45654444 477865432 1 23457999999999999888889999999999999999999877788999999999
Q ss_pred hhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCC-CccccCCccccceecccccc
Q 002174 135 LLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ-IPPELSRLPSLVHMLLDNNN 213 (956)
Q Consensus 135 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~ 213 (956)
|+|++|++++..+..|.++++|++|++++|++++..+..+.++++|++|+|++|++++. +|..+..+++|++|+|++|+
T Consensus 81 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 81 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCC
Confidence 99999999988889999999999999999999988887899999999999999999864 68899999999999999999
Q ss_pred ccCCCCcccCCcchhh----hhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCC
Q 002174 214 LTGYLPPELSELPKLL----ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNG 288 (956)
Q Consensus 214 l~~~~p~~l~~l~~L~----~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~ 288 (956)
+++..+..|..+++|+ .|++++|.+++ ++.......+|+.|+|++|++++.++. +..+++|+.|+|++|++.+
T Consensus 161 l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~--~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 161 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF--IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCEECGGGGHHHHTCTTCCEEEECCSSCCCE--ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCcCCHHHhhhhhhccccceeeecCCCcccc--cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 9987777777666666 56666776663 223222333566666666666665554 4556666666666666553
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=2.8e-24 Score=231.71 Aligned_cols=213 Identities=23% Similarity=0.270 Sum_probs=103.9
Q ss_pred CCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeeccc
Q 002174 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (956)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (956)
++++++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L------- 87 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNL------- 87 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTC-------
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCC-------
Confidence 445555555555 3444332 345555555555554444444444555555554444443333333444444
Q ss_pred CcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCC
Q 002174 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (956)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (956)
++|+|++|++++..+..|..+++|++|+|++|++++ ..+..|.++++|++|+|++|.+++.+
T Consensus 88 -----------------~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 88 -----------------ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKS-LPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp -----------------CEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred -----------------CEEECCCCcCCcCCHhHcccccCCCEEECCCCccCe-eCHHHhCcCcCCCEEECCCCcCCccC
Confidence 444444444443333333333334444444444432 22233344444444444444444333
Q ss_pred CC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhcc
Q 002174 268 PD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT 346 (956)
Q Consensus 268 ~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~ 346 (956)
+. +..+++|+.|+|++|+ +++..+..|.++++|+.|+|++|++++..+..+.
T Consensus 150 ~~~~~~l~~L~~L~L~~n~-----------------------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---- 202 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQ-----------------------LKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFD---- 202 (270)
T ss_dssp TTTTTTCTTCCEEECCSSC-----------------------CSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT----
T ss_pred HhHccCCcccceeEecCCc-----------------------CcEeChhHhccCCCcCEEECCCCcCCcCCHHHhc----
Confidence 32 3333333333333333 3333344556666666666666666643333222
Q ss_pred CCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCC-cccccCCCC
Q 002174 347 LNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTN-AEQFCGSHS 398 (956)
Q Consensus 347 l~~~~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~-~~~~~~~~~ 398 (956)
.++.+..|++++|||.|+|+ +.++..|+.
T Consensus 203 -----------------------~l~~L~~L~l~~N~~~c~c~~~~~~~~~l~ 232 (270)
T 2o6q_A 203 -----------------------SLEKLKMLQLQENPWDCTCNGIIYMAKWLK 232 (270)
T ss_dssp -----------------------TCTTCCEEECCSSCBCCSSSSSHHHHHHHH
T ss_pred -----------------------cccCCCEEEecCCCeeCCCccHHHHHHHHH
Confidence 24566788899999999997 566666664
No 322
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=2e-24 Score=237.79 Aligned_cols=224 Identities=18% Similarity=0.200 Sum_probs=182.6
Q ss_pred CCCCEEEccCCCCcccCCc---cccCCcccchhhccCCCCCCCCCccc--CCCccccceeeccccccCCCC----ccccc
Q 002174 106 SYLTILDFMWNKISGSIPK---EIGNIKSLELLLLNGNELTGSLPEEL--GYLPKLDRIQIDQNYISGSLP----KSFAN 176 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~ 176 (956)
..++.|.+.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 4578899998887632111 12335679999999999999999998 899999999999999997665 44568
Q ss_pred cccCCeeecccCcccCCCccccCCccccceeccccccccCC--C--CcccCCcchhhhhcccCCcCCCCCCch----hcc
Q 002174 177 LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY--L--PPELSELPKLLILQLDNNNFEGTTIPA----SYS 248 (956)
Q Consensus 177 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~Ls~N~l~~~~~p~----~~~ 248 (956)
+++|++|+|++|++.+..+..|..+++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+.
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~--l~~~~~~l~~ 221 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET--PTGVCAALAA 221 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC--HHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc--hHHHHHHHHh
Confidence 99999999999999988889999999999999999998752 2 2334788999999999999973 333 357
Q ss_pred CCCCCcEEeccCCCCccCC-CCCCCC---CCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCC
Q 002174 249 NMSKLLKLSLRNCSLQGPM-PDLSRI---PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQ 324 (956)
Q Consensus 249 ~l~~L~~L~Ls~N~l~~~~-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 324 (956)
++++|++|+|++|++++.. +.+..+ ++|++|+|++|+|+ .+|.... .+|++|+|++|+|++. |. +..+++|+
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~-~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP-AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC-SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc-CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8899999999999999974 445555 79999999999999 7777665 6899999999999864 33 67888899
Q ss_pred eEecccccCCC
Q 002174 325 RLFIANNSLSG 335 (956)
Q Consensus 325 ~L~L~~N~l~~ 335 (956)
.|+|++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999988874
No 323
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=1.6e-25 Score=264.30 Aligned_cols=190 Identities=14% Similarity=0.187 Sum_probs=144.9
Q ss_pred CCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChh--------hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002174 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 627 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
...+.||+|+||+||+|.. .++.+++|+....... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 5678888876542211 134589999999999999999666666677778999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002174 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.. +..++.|+++||+|||+++ |+||||||+|||++. .+||+|||+|+.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999965 5579999999999999999 999999999999999 9999999999876432
Q ss_pred CCCCccccceecccccCCCccccccccc--CCCCCcccEeehHHHHHHHHhCCCCC
Q 002174 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPI 832 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwSlG~ll~elltg~~pf 832 (956)
...............||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1000000001235679999999999987 66888899999998888888777666
No 324
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.90 E-value=2.2e-27 Score=276.82 Aligned_cols=305 Identities=17% Similarity=0.149 Sum_probs=212.8
Q ss_pred ceeeEEEeCCCCccccCCcCc-cCCC----CCCEEEccCCCCcc----cCCccccCCcccchhhccCCCCCCCCCcccC-
Q 002174 82 LHLRELQLLNLNLSGNLSPEI-GRLS----YLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGSLPEELG- 151 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l-~~l~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 151 (956)
.+++.|+|++|.+++..+..+ ..+. +|++|+|++|+++. .++..+.++++|++|+|++|.+++..+..+.
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 357788888887765433332 2344 68888888888773 4577778888888888888887644333322
Q ss_pred ----CCccccceeeccccccCCC----CccccccccCCeeecccCcccCCCccccC-----CccccceeccccccccCC-
Q 002174 152 ----YLPKLDRIQIDQNYISGSL----PKSFANLNKTRHFHMNNNSISGQIPPELS-----RLPSLVHMLLDNNNLTGY- 217 (956)
Q Consensus 152 ----~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~- 217 (956)
.+++|++|+|++|++++.. +..+..+++|++|+|++|.++...+..+. ..++|++|+|++|++++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 2457888888888877533 55566678888888888887754443333 255888888888888864
Q ss_pred ---CCcccCCcchhhhhcccCCcCCCCCC----chhccCCCCCcEEeccCCCCccC-----CCCCCCCCCccEEEccCCc
Q 002174 218 ---LPPELSELPKLLILQLDNNNFEGTTI----PASYSNMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQ 285 (956)
Q Consensus 218 ---~p~~l~~l~~L~~L~Ls~N~l~~~~~----p~~~~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~ 285 (956)
++..+..+++|++|+|++|.+++... +..+..+++|++|+|++|.++.. +..+..+++|++|++++|.
T Consensus 216 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 295 (461)
T 1z7x_W 216 CRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNE 295 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCC
T ss_pred HHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCC
Confidence 45666777888888888888764111 22334578888888888888763 3335667888899999988
Q ss_pred CCCCCCCCCC------ccccCEEEccCCcCCCC----cchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEE
Q 002174 286 LNGSIPPGRL------SLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 355 (956)
Q Consensus 286 l~~~~p~~~~------~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L 355 (956)
+++..+.... ..+|++|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+...-.-..+.|+.|
T Consensus 296 i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L 375 (461)
T 1z7x_W 296 LGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVL 375 (461)
T ss_dssp CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred CchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEE
Confidence 8643332211 13789999999998875 5667778899999999999988766666654322224567899
Q ss_pred EccCCCCC-----CCCCCC-CCCCCcEEEecCCcccc
Q 002174 356 DFQNNNLT-----NISGSF-NIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 356 ~Ls~N~L~-----~l~~~~-~~~~l~~l~l~~Np~~c 386 (956)
+|++|+++ .++..+ ..+.++.|++++|++..
T Consensus 376 ~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 376 WLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred ECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 99999988 455554 47888999999998654
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=2.9e-24 Score=231.82 Aligned_cols=211 Identities=19% Similarity=0.228 Sum_probs=127.8
Q ss_pred ccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCC
Q 002174 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (956)
Q Consensus 102 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (956)
+..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++..+..|.++++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 445666666677666665 233 466666666666666666642 3566666666666666666655555566666666
Q ss_pred eeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
+|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++ ..+..|.++++|+.|+|++|
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc-cCHHHhcCCccCCEEECCCC
Confidence 66666666665555556666666666666666665555555555666666666666554 33344555555555555555
Q ss_pred CCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChh
Q 002174 262 SLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSS 340 (956)
Q Consensus 262 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~ 340 (956)
++++.++. +..+++|++|++++|.+ .+ .+++|+.|+++.|+++|.+|.+
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~-----------------------~~-------~~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPW-----------------------DC-------TCPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCB-----------------------CC-------CTTTTHHHHHHHHHTGGGBBCT
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCc-----------------------cc-------cCcHHHHHHHHHHhCCCcccCc
Confidence 55554443 44555555555555544 32 3456777888888888888887
Q ss_pred hhhhccC
Q 002174 341 IWQSRTL 347 (956)
Q Consensus 341 ~~~l~~l 347 (956)
++.+...
T Consensus 242 ~~~~~~~ 248 (272)
T 3rfs_A 242 AGSVAPD 248 (272)
T ss_dssp TSCBCGG
T ss_pred ccccCCC
Confidence 7665543
No 326
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.90 E-value=8.8e-23 Score=243.72 Aligned_cols=239 Identities=26% Similarity=0.317 Sum_probs=199.6
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceee
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|+|++|+|+. +|. .+++|++|+|++|+|+ .+|. .+++|++|+|++|++++ +|. .+++|+.|+|
T Consensus 61 ~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L 128 (622)
T 3g06_A 61 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWI 128 (622)
T ss_dssp TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEEC
T ss_pred CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEEC
Confidence 589999999999984 555 6799999999999999 5775 67999999999999995 455 6789999999
Q ss_pred ccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCC
Q 002174 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
++|+|++ +|.. +++|++|+|++|++++ +|. .+++|+.|++++|+|++ +| ..+++|+.|+|++|.+++
T Consensus 129 ~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 129 FGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp CSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 9999995 5553 4899999999999985 454 35789999999999996 45 456899999999999985
Q ss_pred CCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCC
Q 002174 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (956)
+|. .+++|+.|++++|.++..+.. +++|+.|+|++|+|++ +|. ...+|+.|+|++|.|+. +|. .++
T Consensus 196 -l~~---~~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp~--~l~~L~~L~Ls~N~L~~-lp~---~~~ 261 (622)
T 3g06_A 196 -LPT---LPSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LPV--LPSELKELMVSGNRLTS-LPM---LPS 261 (622)
T ss_dssp -CCC---CCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC---CCT
T ss_pred -CCC---ccchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CCC--CCCcCcEEECCCCCCCc-CCc---ccc
Confidence 444 357899999999999976643 4789999999999995 662 33589999999999994 555 678
Q ss_pred cCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCC
Q 002174 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (956)
Q Consensus 322 ~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l 365 (956)
+|+.|+|++|+|+ .+|..+..+.+ |+.|+|++|.+++.
T Consensus 262 ~L~~L~Ls~N~L~-~lp~~l~~l~~-----L~~L~L~~N~l~~~ 299 (622)
T 3g06_A 262 GLLSLSVYRNQLT-RLPESLIHLSS-----ETTVNLEGNPLSER 299 (622)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGSCT-----TCEEECCSCCCCHH
T ss_pred cCcEEeCCCCCCC-cCCHHHhhccc-----cCEEEecCCCCCCc
Confidence 9999999999999 78888876554 56999999999864
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.3e-23 Score=226.66 Aligned_cols=202 Identities=24% Similarity=0.275 Sum_probs=119.2
Q ss_pred ccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCC
Q 002174 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (956)
Q Consensus 102 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (956)
++++++|++|++++|+++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.|++..+. ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 556666777777777776 4555443 4666777777777666666666666666666666666633221 5566666
Q ss_pred eeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
+|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++ ..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT-LPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc-cChhhcccccCCCEEECCCC
Confidence 6666666665 455556666666666666666665555556666666666666666554 23344555555555555555
Q ss_pred CCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCC
Q 002174 262 SLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (956)
Q Consensus 262 ~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (956)
+|++.++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~------------------------~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY------------------------TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC------------------------CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC------------------------ccChhhcccccCCeEEeCCCCcc
Confidence 55554443 344555555555555554 34444445556666666666654
No 328
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.89 E-value=2e-26 Score=268.64 Aligned_cols=303 Identities=17% Similarity=0.171 Sum_probs=216.0
Q ss_pred ceeeEEEeCCCCccccCCcC-ccCCCCCCEEEccCCCCcc----cCCccccCCcccchhhccCCCCCCCCCccc-CCCc-
Q 002174 82 LHLRELQLLNLNLSGNLSPE-IGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGSLPEEL-GYLP- 154 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~-l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~- 154 (956)
.+++.|+|++++++...... +..+++|++|+|++|++++ .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 46888888888887644333 6778888999999888874 356677788889999999888875434333 2344
Q ss_pred ---cccceeeccccccC----CCCccccccccCCeeecccCcccCCCcccc-----CCccccceeccccccccCCC----
Q 002174 155 ---KLDRIQIDQNYISG----SLPKSFANLNKTRHFHMNNNSISGQIPPEL-----SRLPSLVHMLLDNNNLTGYL---- 218 (956)
Q Consensus 155 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~---- 218 (956)
+|++|+|++|+++. .++..+..+++|++|+|++|.++...+..+ ...++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 68899999988874 457788888889999999888875433332 23567888999988888643
Q ss_pred CcccCCcchhhhhcccCCcCCCCCCchhcc-----CCCCCcEEeccCCCCccC-----CCCCCCCCCccEEEccCCcCCC
Q 002174 219 PPELSELPKLLILQLDNNNFEGTTIPASYS-----NMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQLNG 288 (956)
Q Consensus 219 p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~~ 288 (956)
+..+..+++|++|+|++|.+++ ..+..+. .+++|+.|+|++|.++.. +..+..+++|++|++++|.+++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~-~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINE-AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHH-HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHhhCCCCCEEECcCCCcch-HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 4556667888888998888864 2233332 356888999998888763 2235677888889999888864
Q ss_pred CCC----CCC--CccccCEEEccCCcCCCC----cchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEcc
Q 002174 289 SIP----PGR--LSLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQ 358 (956)
Q Consensus 289 ~~p----~~~--~~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls 358 (956)
... ... ...+|++|+|++|.++.. ++..+..+++|+.|+|++|++.+..+..+...-.-..+.|+.|+|+
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 321 111 134788899999888864 5677777888999999998887666666655433334567888888
Q ss_pred CCCCCCCC-----CCC-CCCCCcEEEecCCccc
Q 002174 359 NNNLTNIS-----GSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 359 ~N~L~~l~-----~~~-~~~~l~~l~l~~Np~~ 385 (956)
+|+++... ..+ ..+.++.|++++|...
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~ 354 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLE 354 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCH
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccc
Confidence 88887642 222 3578888888888643
No 329
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=4.4e-23 Score=219.78 Aligned_cols=191 Identities=20% Similarity=0.267 Sum_probs=117.9
Q ss_pred CCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCC
Q 002174 62 PCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE 141 (956)
Q Consensus 62 ~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (956)
.|+ .|.|.+|.. ..+.+++++++++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|.
T Consensus 3 ~Cp-~~~gC~C~~--------~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 70 (251)
T 3m19_A 3 TCE-TVTGCTCNE--------GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQ 70 (251)
T ss_dssp -CH-HHHSSEEEG--------GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred cCC-CCCceEcCC--------CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCc
Confidence 354 588999943 2456777777776 4455444 467777777777776666667777777777777777
Q ss_pred CCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcc
Q 002174 142 LTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPE 221 (956)
Q Consensus 142 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~ 221 (956)
+++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+.
T Consensus 71 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~- 149 (251)
T 3m19_A 71 LQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAG- 149 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-
T ss_pred CCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHH-
Confidence 7766666666666777777666666655555566666666666666666544444455555555555555555544333
Q ss_pred cCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCC
Q 002174 222 LSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGS 289 (956)
Q Consensus 222 l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~ 289 (956)
.|.++++|+.|+|++|++++.++ .+..+++|+.|+|++|++.+.
T Consensus 150 ------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 150 ------------------------AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp ------------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred ------------------------HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 44555555555555555555444 355566666666666666543
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=3.5e-23 Score=218.78 Aligned_cols=194 Identities=16% Similarity=0.214 Sum_probs=139.4
Q ss_pred CCCEEEccCCCCcccCCccccCCcccchhhccCCC-CCCCCCcccCCCccccceeecc-ccccCCCCccccccccCCeee
Q 002174 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE-LTGSLPEELGYLPKLDRIQIDQ-NYISGSLPKSFANLNKTRHFH 184 (956)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 184 (956)
+|++|+|++|++++..+..|.++++|++|+|++|+ ++...+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67777777777776555567777777777777776 6655556777777777777777 777766666777777777777
Q ss_pred cccCcccCCCccccCCccccc---eeccccc-cccCCCCcccCCcchhh-hhcccCCcCCCCCCch-hccCCCCCcEEec
Q 002174 185 MNNNSISGQIPPELSRLPSLV---HMLLDNN-NLTGYLPPELSELPKLL-ILQLDNNNFEGTTIPA-SYSNMSKLLKLSL 258 (956)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~Ls~N~l~~~~~p~-~~~~l~~L~~L~L 258 (956)
|++|++++ +|. |..+++|+ +|++++| ++++..+..|.++++|+ .|+|++|+++ .+|. .|.. ++|+.|+|
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~--~i~~~~~~~-~~L~~L~L 186 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT--SVQGYAFNG-TKLDAVYL 186 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC--EECTTTTTT-CEEEEEEC
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc--ccCHhhcCC-CCCCEEEc
Confidence 77777775 555 67777776 7888887 77766666677777888 8888888776 3443 3443 77888888
Q ss_pred cCCC-CccCCCC-CCCC-CCccEEEccCCcCCCCCCCCCCccccCEEEccCC
Q 002174 259 RNCS-LQGPMPD-LSRI-PNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNN 307 (956)
Q Consensus 259 s~N~-l~~~~~~-~~~l-~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N 307 (956)
++|+ ++..++. |..+ ++|+.|++++|+|+ .+|.. ...+|+.|+++++
T Consensus 187 ~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~-~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 187 NKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK-GLEHLKELIARNT 236 (239)
T ss_dssp TTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT-TCTTCSEEECTTC
T ss_pred CCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh-HhccCceeeccCc
Confidence 8884 7776554 6777 78888888888887 45544 2337888887766
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.89 E-value=3.4e-23 Score=223.39 Aligned_cols=204 Identities=18% Similarity=0.241 Sum_probs=181.8
Q ss_pred cceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
..+++.|++.++.+... +.+..+++|++|+|++|.+++ + ..+.++++|++|+|++|.+++..+..|.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 34689999999988742 468999999999999999996 3 4799999999999999999988888899999999999
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
|++|++++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|++++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 99999998888889999999999999999998888888999999999999999998888889999999999999999997
Q ss_pred CCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCC
Q 002174 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL 295 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 295 (956)
..+..+.++++|+.|+|++|.+.+. +++|+.|+++.|.++|.+|....
T Consensus 196 -~~~~~~~~l~~L~~L~l~~N~~~~~------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 196 -VPDGVFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp -CCTTTTTTCTTCCEEECCSSCBCCC------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred -cCHHHHhCCcCCCEEEccCCCcccc------CcHHHHHHHHHHhCCCcccCccc
Confidence 5677789999999999999998754 44677888888888877776543
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.8e-23 Score=228.69 Aligned_cols=224 Identities=20% Similarity=0.191 Sum_probs=184.5
Q ss_pred eeeEEEeCCCCccccCCc---CccCCCCCCEEEccCCCCcccCCccc--cCCcccchhhccCCCCCCCCC----cccCCC
Q 002174 83 HLRELQLLNLNLSGNLSP---EIGRLSYLTILDFMWNKISGSIPKEI--GNIKSLELLLLNGNELTGSLP----EELGYL 153 (956)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~---~l~~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l 153 (956)
.++.+.+.++.++...-. .+..+++|++|+|++|++++.+|..+ .++++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 467788888777642111 22345679999999999999999988 999999999999999998766 445679
Q ss_pred ccccceeeccccccCCCCccccccccCCeeecccCcccCC--C--ccccCCccccceeccccccccCCCCc----ccCCc
Q 002174 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQ--I--PPELSRLPSLVHMLLDNNNLTGYLPP----ELSEL 225 (956)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~l~~l~~L~~L~L~~N~l~~~~p~----~l~~l 225 (956)
++|++|+|++|++++..+..|.++++|++|+|++|++.+. + +..+..+++|++|+|++|+++. ++. .+..+
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcC
Confidence 9999999999999988899999999999999999998753 2 2334789999999999999973 233 25678
Q ss_pred chhhhhcccCCcCCCCCCchhccCC---CCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEE
Q 002174 226 PKLLILQLDNNNFEGTTIPASYSNM---SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTI 302 (956)
Q Consensus 226 ~~L~~L~Ls~N~l~~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L 302 (956)
++|++|+|++|++++ ..|..+..+ ++|++|+|++|+++..+..+. ++|+.|+|++|+|++. |......+|+.|
T Consensus 224 ~~L~~L~Ls~N~l~~-~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L 299 (310)
T 4glp_A 224 VQPHSLDLSHNSLRA-TVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNL 299 (310)
T ss_dssp CCCSSEECTTSCCCC-CCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCE
T ss_pred CCCCEEECCCCCCCc-cchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEE
Confidence 999999999999997 457777766 699999999999997766664 7999999999999953 443344589999
Q ss_pred EccCCcCCC
Q 002174 303 KLSNNKLTG 311 (956)
Q Consensus 303 ~Ls~N~l~~ 311 (956)
+|++|.|+.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999974
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.5e-22 Score=222.52 Aligned_cols=193 Identities=22% Similarity=0.380 Sum_probs=109.9
Q ss_pred CCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCcccccee
Q 002174 128 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207 (956)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 207 (956)
.+++|++|++++|.++. +| .+..+++|++|+|++|++++..+ +.++++|++|+|++|++++. + .+..+++|++|
T Consensus 39 ~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L 112 (308)
T 1h6u_A 39 DLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTL 112 (308)
T ss_dssp HHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEE
T ss_pred HcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEE
Confidence 34444444444444442 22 34444444444444444443222 44444555555555554432 2 34555555555
Q ss_pred ccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCC
Q 002174 208 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 208 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 287 (956)
+|++|++++. + .+..+++|++|+|++|.+++ ++. +..+++|+.|+|++|.+++.++ +..+++|+.|++++|+++
T Consensus 113 ~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~--~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 113 DLTSTQITDV-T-PLAGLSNLQVLYLDLNQITN--ISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKIS 186 (308)
T ss_dssp ECTTSCCCCC-G-GGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred ECCCCCCCCc-h-hhcCCCCCCEEECCCCccCc--Ccc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccC
Confidence 5555555542 2 25555666666666666653 222 5666666777777776666544 666677777777777776
Q ss_pred CCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCC
Q 002174 288 GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSG 335 (956)
Q Consensus 288 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 335 (956)
+. +......+|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 187 ~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 187 DI-SPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CC-GGGGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cC-hhhcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 33 332233477788888888776553 7889999999999999874
No 334
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=1.5e-22 Score=238.88 Aligned_cols=224 Identities=26% Similarity=0.332 Sum_probs=130.6
Q ss_pred CCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecc
Q 002174 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (956)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (956)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-i---------------- 115 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-L---------------- 115 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-C----------------
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-c----------------
Confidence 55666666666654 454442 45555555555555 344 234455555555555553 3
Q ss_pred cCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccC
Q 002174 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (956)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 266 (956)
|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++.
T Consensus 116 --------p~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~--lp~---~l~~L~~L~Ls~N~L~~l 175 (571)
T 3cvr_A 116 --------PE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM--LPE---LPTSLEVLSVRNNQLTFL 175 (571)
T ss_dssp --------CC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--CCC---CCTTCCEEECCSSCCSCC
T ss_pred --------ch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc--CCC---cCCCcCEEECCCCCCCCc
Confidence 33 332 45555555555554 333 34555555555665553 333 456677777777777665
Q ss_pred CCCCCCCCCccEEEccCCcCCCCCCCCCCcccc-------CEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCCh
Q 002174 267 MPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNI-------TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS 339 (956)
Q Consensus 267 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~ 339 (956)
+. +. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.+|.
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~-~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV-RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC---------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH-hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 44 44 67777777777777 5666 333 66 89999999998 5788888899999999999999999999
Q ss_pred hhhhhccCCCC--cceEEEccCCCCCCCCCCCCCCCCcEEEecCCcccccCCcccccCCC
Q 002174 340 SIWQSRTLNAT--ETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSH 397 (956)
Q Consensus 340 ~~~~l~~l~~~--~L~~L~Ls~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~~~~~~~~~ 397 (956)
.+..+...... ....+++++|++.. -.|| .|+|...||-.+.
T Consensus 249 ~l~~l~~~~~~~~~~~~~~l~~~~~~~---------------~~~p-~~~~~~~Wl~~~~ 292 (571)
T 3cvr_A 249 SLSQQTAQPDYHGPRIYFSMSDGQQNT---------------LHRP-LADAVTAWFPENK 292 (571)
T ss_dssp HHHHHHHSCC---CEEECCC-------------------------C-CSHHHHTTCC---
T ss_pred HHHHhhcCccccCCeeEEeeccccccc---------------cccc-chhhHHHHhhhhc
Confidence 99887653211 11123444444432 2456 7999988885444
No 335
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=2.9e-22 Score=213.46 Aligned_cols=202 Identities=19% Similarity=0.203 Sum_probs=129.4
Q ss_pred cchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccc
Q 002174 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (956)
Q Consensus 132 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 211 (956)
.++++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 16 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 444555555554 3444333 3555555555555555555555666666666666666655555566666666666666
Q ss_pred ccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCC
Q 002174 212 NNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSI 290 (956)
Q Consensus 212 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~ 290 (956)
|++++..+..|..+++|++|+|++|++++ ..+..|.++++|+.|+|++|++++.++. +..+++|++|+|++|+|++..
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCC-cChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 66666666666777777777777777765 3455678889999999999999988874 899999999999999999655
Q ss_pred CCCCCc-cccCEEEccCCcCCCCc------chhcCCCCcCCeEecccccCCCcCC
Q 002174 291 PPGRLS-LNITTIKLSNNKLTGTI------PSNFSGLPRLQRLFIANNSLSGSIP 338 (956)
Q Consensus 291 p~~~~~-~~L~~L~Ls~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~ip 338 (956)
+..+.. .+|+.|+|++|.+++.. +.++.. ...+..+..+|.+.+..+
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~ 225 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSRCEILYLSQWIRE-NSNKVKDGTGQNLHESPD 225 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHHHHH-SGGGBCC-------CCGG
T ss_pred HHHHhCCCCCCEEEeeCCceeCCccccHHHHHHHHh-cccceeeccCcccccCCC
Confidence 544443 48999999999998762 222221 122334556666665433
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.1e-24 Score=245.30 Aligned_cols=258 Identities=17% Similarity=0.158 Sum_probs=128.9
Q ss_pred EEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCC----ccccCCc-ccchhhccCCCCCCCCCcccCCC-----ccc
Q 002174 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP----KEIGNIK-SLELLLLNGNELTGSLPEELGYL-----PKL 156 (956)
Q Consensus 87 L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 156 (956)
.++++++++|.+|..+...++|++|+|++|.+++..+ ..|.+++ +|++|+|++|.+++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4556666666666655555667777777776665444 5555665 66666666666666555555554 666
Q ss_pred cceeeccccccCCCCcccccc-----ccCCeeecccCcccCCCccccC----C-ccccceeccccccccCCCCcc----c
Q 002174 157 DRIQIDQNYISGSLPKSFANL-----NKTRHFHMNNNSISGQIPPELS----R-LPSLVHMLLDNNNLTGYLPPE----L 222 (956)
Q Consensus 157 ~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~L~~N~l~~~~p~~----l 222 (956)
++|+|++|.+++..+..+... ++|++|+|++|++++..+..+. . .++|++|+|++|++++..... +
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 666666666665555443332 5666666666666544443322 2 135666666666665432222 2
Q ss_pred CCcc-hhhhhcccCCcCCCCCCchh----ccCC-CCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCc
Q 002174 223 SELP-KLLILQLDNNNFEGTTIPAS----YSNM-SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS 296 (956)
Q Consensus 223 ~~l~-~L~~L~Ls~N~l~~~~~p~~----~~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 296 (956)
..++ +|++|+|++|++++ ..+.. +..+ ++|+.|+|++|.++..... .++.....
T Consensus 163 ~~~~~~L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~-------------------~l~~~l~~ 222 (362)
T 3goz_A 163 AAIPANVNSLNLRGNNLAS-KNCAELAKFLASIPASVTSLDLSANLLGLKSYA-------------------ELAYIFSS 222 (362)
T ss_dssp HTSCTTCCEEECTTSCGGG-SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH-------------------HHHHHHHH
T ss_pred hcCCccccEeeecCCCCch-hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH-------------------HHHHHHhc
Confidence 2222 45555555555543 22222 2222 3445555554444431110 01111111
Q ss_pred --cccCEEEccCCcCCCCcc----hhcCCCCcCCeEecccccCCCcCChhhhhhcc--CCCCcceEEEccCCCCCC
Q 002174 297 --LNITTIKLSNNKLTGTIP----SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRT--LNATETFILDFQNNNLTN 364 (956)
Q Consensus 297 --~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~--l~~~~L~~L~Ls~N~L~~ 364 (956)
.+|++|+|++|.|++..+ ..+..+++|+.|+|++|.+.+..+..+..+.. -....|+.||+++|++..
T Consensus 223 ~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 223 IPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp SCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred CCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 245555555555554333 23344555666666666554433333322211 123345556666666543
No 337
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=4.8e-22 Score=222.70 Aligned_cols=246 Identities=19% Similarity=0.230 Sum_probs=179.7
Q ss_pred CCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCC
Q 002174 63 CTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNEL 142 (956)
Q Consensus 63 c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 142 (956)
|.|.|+.|.|.+. +|+ .+|..+ .+++++|+|++|+|+...+..|.++++|++|+|++|++
T Consensus 7 C~C~~~~v~C~~~-----------------~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i 66 (350)
T 4ay9_X 7 CHCSNRVFLCQES-----------------KVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 66 (350)
T ss_dssp SEEETTEEEEEST-----------------TCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTT
T ss_pred cEeeCCEEEecCC-----------------CCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCC
Confidence 7667888888543 344 455555 35788999999999855556788899999999999988
Q ss_pred CCCCC-cccCCCccccc-eeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccc-ccccCCCC
Q 002174 143 TGSLP-EELGYLPKLDR-IQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN-NNLTGYLP 219 (956)
Q Consensus 143 ~~~~p-~~~~~l~~L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p 219 (956)
.+.+| ..|.++++|++ +.++.|+|+...|..|.++++|++|++++|++....+..+....++..|++.+ |++....+
T Consensus 67 ~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 67 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp CCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT
T ss_pred CCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc
Confidence 76555 46788888765 56667888877788888889999999999988877666777777888888865 56776666
Q ss_pred cccCCcc-hhhhhcccCCcCCCCCCchhccCCCCCcEEeccC-CCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCc
Q 002174 220 PELSELP-KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-CSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLS 296 (956)
Q Consensus 220 ~~l~~l~-~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 296 (956)
..|..+. .++.|+|++|+|+ .++.......+|+.|++++ |.++..+++ |..+++|++|||++|+|+ .+|...+
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~--~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~~~~- 222 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQ--EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPSYGL- 222 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCC--EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCSSSC-
T ss_pred cchhhcchhhhhhcccccccc--CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccChhhh-
Confidence 6676664 5778888888887 3555555667888888874 666666654 788888888888888888 5665433
Q ss_pred cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccC
Q 002174 297 LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSL 333 (956)
Q Consensus 297 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 333 (956)
.+|+.|.+.++.--..+| .+.++++|+.++++++.-
T Consensus 223 ~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~~ 258 (350)
T 4ay9_X 223 ENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPSH 258 (350)
T ss_dssp TTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHHH
T ss_pred ccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCcc
Confidence 367777766654333555 477788888888876553
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=3e-22 Score=211.58 Aligned_cols=218 Identities=16% Similarity=0.170 Sum_probs=141.9
Q ss_pred CCCCCCC-Cc--eeecCC-CCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCC-CcccCCccccCCcccchh
Q 002174 61 DPCTSNW-TG--VLCFNT-TMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK-ISGSIPKEIGNIKSLELL 135 (956)
Q Consensus 61 ~~c~~~w-~g--v~C~~~-~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 135 (956)
+.|.|.+ .+ |.|.+- ..+.....++.|++++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|
T Consensus 6 ~~C~C~~~~~~~v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L 85 (239)
T 2xwt_C 6 PPCECHQEEDFRVTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHI 85 (239)
T ss_dssp SSCSEEECSTTEEEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEE
T ss_pred CCCeeCCCCcceeEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEE
Confidence 3455433 54 447541 112233467777777777776666677777777777777775 665555567777777777
Q ss_pred hccC-CCCCCCCCcccCCCccccceeeccccccCCCCccccccccCC---eeecccC-cccCCCccccCCccccc-eecc
Q 002174 136 LLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR---HFHMNNN-SISGQIPPELSRLPSLV-HMLL 209 (956)
Q Consensus 136 ~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~L 209 (956)
+|++ |++++..+..|.++++|++|+|++|++++ +|. |..+++|+ +|++++| .+++..+..|..+++|+ +|++
T Consensus 86 ~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l 163 (239)
T 2xwt_C 86 EIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKL 163 (239)
T ss_dssp EEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEEC
T ss_pred ECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEc
Confidence 7776 77776556667777777777777777774 454 66666776 7777777 77655556677777777 7777
Q ss_pred ccccccCCCCcccCCcchhhhhcccCCc-CCCCCCchhccCC-CCCcEEeccCCCCccCCCCCCCCCCccEEEccCC
Q 002174 210 DNNNLTGYLPPELSELPKLLILQLDNNN-FEGTTIPASYSNM-SKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 284 (956)
Q Consensus 210 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N 284 (956)
++|+++...+..|.. ++|+.|+|++|+ +++ ..+..|.++ ++|+.|+|++|++++.++. .+++|+.|+++++
T Consensus 164 ~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~-i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 164 YNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTV-IDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CSCCCCEECTTTTTT-CEEEEEECTTCTTCCE-ECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCCCcccCHhhcCC-CCCCEEEcCCCCCccc-CCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 777777433334444 677777777774 663 334566777 7777777777777765554 5567777777655
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=5.9e-24 Score=239.47 Aligned_cols=255 Identities=16% Similarity=0.179 Sum_probs=165.5
Q ss_pred EEEccCCCCcccCCccccCCcccchhhccCCCCCCCCC----cccCCCc-cccceeeccccccCCCCcccccc-----cc
Q 002174 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLP----EELGYLP-KLDRIQIDQNYISGSLPKSFANL-----NK 179 (956)
Q Consensus 110 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 179 (956)
.++|++|+++|.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|++++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46788888888888777777778888888888886666 6677777 78888888888887767766665 77
Q ss_pred CCeeecccCcccCCCccccCC----c-cccceeccccccccCCCCcccC----C-cchhhhhcccCCcCCCC---CCchh
Q 002174 180 TRHFHMNNNSISGQIPPELSR----L-PSLVHMLLDNNNLTGYLPPELS----E-LPKLLILQLDNNNFEGT---TIPAS 246 (956)
Q Consensus 180 L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~Ls~N~l~~~---~~p~~ 246 (956)
|++|+|++|++++..+..+.. + ++|++|+|++|++++..+..+. . .++|++|+|++|.+++. .++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 777777777777655554333 2 6777777777777655443332 2 13555555555555421 01112
Q ss_pred ccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCC-----c-cccCEEEccCCcCCCC----cchh
Q 002174 247 YSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL-----S-LNITTIKLSNNKLTGT----IPSN 316 (956)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~-~~L~~L~Ls~N~l~~~----~p~~ 316 (956)
+..++ ++|++|+|++|++++..+.... . .+|++|+|++|.|+.. ++..
T Consensus 162 l~~~~----------------------~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~ 219 (362)
T 3goz_A 162 LAAIP----------------------ANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYI 219 (362)
T ss_dssp HHTSC----------------------TTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred HhcCC----------------------ccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHH
Confidence 22222 1555555555555433332111 1 2566667777766652 4556
Q ss_pred cCCC-CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCC--------CC-CCCCCcEEEecCCcccc
Q 002174 317 FSGL-PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG--------SF-NIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 317 ~~~l-~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~--------~~-~~~~l~~l~l~~Np~~c 386 (956)
+..+ ++|+.|+|++|++++..+..+..+.. ..+.|+.|+|++|.++.+.. .+ .++.+..+++++|++..
T Consensus 220 l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~-~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 220 FSSIPNHVVSLNLCLNCLHGPSLENLKLLKD-SLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHSCTTCCEEECCSSCCCCCCHHHHHHTTT-TTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HhcCCCCceEEECcCCCCCcHHHHHHHHHHh-cCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 6664 59999999999999877766554321 34568899999999666543 23 36677889999999765
Q ss_pred c
Q 002174 387 N 387 (956)
Q Consensus 387 ~ 387 (956)
.
T Consensus 299 ~ 299 (362)
T 3goz_A 299 S 299 (362)
T ss_dssp G
T ss_pred c
Confidence 4
No 340
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.2e-21 Score=202.39 Aligned_cols=183 Identities=20% Similarity=0.209 Sum_probs=120.0
Q ss_pred CCCCCCCCceeecCCCCC----CCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhh
Q 002174 61 DPCTSNWTGVLCFNTTMD----DGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLL 136 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~~~----~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 136 (956)
+.|.|.|++|.|...... +...+++.|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 3 ~~C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (208)
T 2o6s_A 3 SRCSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLN 82 (208)
T ss_dssp TTCEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEE
Confidence 568788999999764321 2234566777777777655555566777777777777777655455566677777777
Q ss_pred ccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccC
Q 002174 137 LNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG 216 (956)
Q Consensus 137 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 216 (956)
|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|.+.+
T Consensus 83 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 77777765555556667777777777777766555566667777777777777765555556666777777777776553
Q ss_pred CCCcccCCcchhhhhcccCCcCCCCCCchhccCCC
Q 002174 217 YLPPELSELPKLLILQLDNNNFEGTTIPASYSNMS 251 (956)
Q Consensus 217 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~ 251 (956)
.+++|++|+++.|+++| .+|..++.++
T Consensus 163 -------~~~~l~~L~~~~n~~~g-~ip~~~~~l~ 189 (208)
T 2o6s_A 163 -------TCPGIRYLSEWINKHSG-VVRNSAGSVA 189 (208)
T ss_dssp -------CTTTTHHHHHHHHHCTT-TBBCTTSSBC
T ss_pred -------CCCCHHHHHHHHHhCCc-eeeccCcccc
Confidence 23466677777777766 5666655544
No 341
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.5e-22 Score=217.19 Aligned_cols=153 Identities=12% Similarity=0.055 Sum_probs=122.9
Q ss_pred HHHHHHhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCCh------------------hhHHHHHHHHHHHHhcC
Q 002174 617 GEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL------------------QGEKEFLTEIQFLSRLH 678 (956)
Q Consensus 617 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 678 (956)
..+......|++.+.||+|+||.||+|.+.+|+.||||.++.... .....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 344445566777799999999999999997799999999864321 13457899999999999
Q ss_pred CCceeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002174 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 679 h~nIv~l~~~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+.+ |+||||||+|||+
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl 226 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLV 226 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEE
Confidence 5 666665543 56699999999999988 521 224569999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc
Q 002174 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 806 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 806 (956)
+ ++.+||+|||+|+.. ..|+|||++..
T Consensus 227 ~-~~~vkl~DFG~a~~~--------------------~~~~a~e~l~r 253 (282)
T 1zar_A 227 S-EEGIWIIDFPQSVEV--------------------GEEGWREILER 253 (282)
T ss_dssp E-TTEEEECCCTTCEET--------------------TSTTHHHHHHH
T ss_pred E-CCcEEEEECCCCeEC--------------------CCCCHHHHHHH
Confidence 9 999999999998642 35788998753
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=6.9e-22 Score=221.40 Aligned_cols=244 Identities=16% Similarity=0.154 Sum_probs=149.2
Q ss_pred CEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCC-ccccccccCCe-eecc
Q 002174 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLP-KSFANLNKTRH-FHMN 186 (956)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~ 186 (956)
++++.++|+++ .+|..+ .++|++|+|++|+|+...+..|.+|++|++|+|++|++.+.+| ..|.++++|++ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 46777777777 567655 2467777777777775444567777777777777777655444 34666666554 4455
Q ss_pred cCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccC
Q 002174 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (956)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 266 (956)
.|+++...|..|..+++|++|++++|+++...+..+....++..|++.++ |++...
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~------------------------~~i~~l 144 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN------------------------INIHTI 144 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC------------------------TTCCEE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc------------------------cccccc
Confidence 56666555666666666666666666666544444444444444444331 233333
Q ss_pred CCC-CCCC-CCccEEEccCCcCCCCCCCCC-CccccCEEEccC-CcCCCCcchhcCCCCcCCeEecccccCCCcCChhhh
Q 002174 267 MPD-LSRI-PNLGYLDLSSNQLNGSIPPGR-LSLNITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (956)
Q Consensus 267 ~~~-~~~l-~~L~~L~Ls~N~l~~~~p~~~-~~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~ 342 (956)
++. |..+ ..++.|+|++|+|+ .+|... ...+|+.|++++ |.++...+..|.++++|+.|+|++|+|+...+..+.
T Consensus 145 ~~~~f~~~~~~l~~L~L~~N~i~-~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~ 223 (350)
T 4ay9_X 145 ERNSFVGLSFESVILWLNKNGIQ-EIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 223 (350)
T ss_dssp CTTSSTTSBSSCEEEECCSSCCC-EECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT
T ss_pred cccchhhcchhhhhhcccccccc-CCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc
Confidence 332 3333 24566666666666 344333 334677777764 555545556778888888888888888844333343
Q ss_pred hhccCCCCcceEEEcc-CCCCCCCCCCCCCCCCcEEEecCCcccccCC
Q 002174 343 QSRTLNATETFILDFQ-NNNLTNISGSFNIPPNVTVRLRGNPFCLNTN 389 (956)
Q Consensus 343 ~l~~l~~~~L~~L~Ls-~N~L~~l~~~~~~~~l~~l~l~~Np~~c~c~ 389 (956)
.+ ..|.+. .++++.+|.-..++++..+++. |||.|.|-
T Consensus 224 ~L--------~~L~~l~~~~l~~lP~l~~l~~L~~l~l~-~~~~c~~~ 262 (350)
T 4ay9_X 224 NL--------KKLRARSTYNLKKLPTLEKLVALMEASLT-YPSHCCAF 262 (350)
T ss_dssp TC--------CEEECTTCTTCCCCCCTTTCCSCCEEECS-CHHHHHHH
T ss_pred cc--------hHhhhccCCCcCcCCCchhCcChhhCcCC-CCccccch
Confidence 32 334433 3567888865568899999985 78888663
No 343
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=1.4e-24 Score=241.81 Aligned_cols=209 Identities=16% Similarity=0.189 Sum_probs=145.5
Q ss_pred CCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCC--CCCCEEEccCCCCcccCCccccCCcccchhhccCCCCC
Q 002174 66 NWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRL--SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELT 143 (956)
Q Consensus 66 ~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 143 (956)
.|.++.|... .++.|+++++.+. +..+..+ ++++.|++++|.+++..+. +.++++|++|+|++|.++
T Consensus 38 ~W~~~~~~~~-------~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~ 106 (336)
T 2ast_B 38 RWYRLASDES-------LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE 106 (336)
T ss_dssp HHHHHHTCST-------TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC
T ss_pred HHHHHhcCch-------hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC
Confidence 6999887432 3677888887776 3456666 7888888888888866554 567788888888888877
Q ss_pred CC-CCcccCCCccccceeeccccccCCCCccccccccCCeeecccC-cccCC-CccccCCccccceeccccc-cccCC-C
Q 002174 144 GS-LPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN-SISGQ-IPPELSRLPSLVHMLLDNN-NLTGY-L 218 (956)
Q Consensus 144 ~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~L~~N-~l~~~-~ 218 (956)
+. ++..+..+++|++|+|++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++. +
T Consensus 107 ~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~ 186 (336)
T 2ast_B 107 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHV 186 (336)
T ss_dssp HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHH
T ss_pred HHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHH
Confidence 55 6777777888888888888877667777777888888888887 56642 5556667777788888777 77643 4
Q ss_pred CcccCCcc-hhhhhcccCC--cCCCCCCchhccCCCCCcEEeccCCC-Ccc-CCCCCCCCCCccEEEccCCc
Q 002174 219 PPELSELP-KLLILQLDNN--NFEGTTIPASYSNMSKLLKLSLRNCS-LQG-PMPDLSRIPNLGYLDLSSNQ 285 (956)
Q Consensus 219 p~~l~~l~-~L~~L~Ls~N--~l~~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~l~~L~~L~Ls~N~ 285 (956)
+..+..++ +|++|+|++| .++...++..+.++++|+.|+|++|. +++ .++.+..+++|++|++++|.
T Consensus 187 ~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 187 QVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp HHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred HHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 55566677 7777777777 34422455666677777777777776 443 23345566666666666664
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=4.8e-24 Score=242.50 Aligned_cols=240 Identities=19% Similarity=0.254 Sum_probs=140.1
Q ss_pred CCcCccCCCCCCEEEccCCCCcccC----CccccCCcccchhhccCC---CCCCCCCccc-------CCCccccceeecc
Q 002174 98 LSPEIGRLSYLTILDFMWNKISGSI----PKEIGNIKSLELLLLNGN---ELTGSLPEEL-------GYLPKLDRIQIDQ 163 (956)
Q Consensus 98 ~~~~l~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~Ls~ 163 (956)
++..+..+++|++|+|++|++++.. +..|.++++|++|+|++| ++++.+|..+ ..+++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 5566777788888888888887653 334667788888888875 3444555544 5677788888888
Q ss_pred ccccC----CCCccccccccCCeeecccCcccCCCccccC----Cc---------cccceecccccccc-CCCC---ccc
Q 002174 164 NYISG----SLPKSFANLNKTRHFHMNNNSISGQIPPELS----RL---------PSLVHMLLDNNNLT-GYLP---PEL 222 (956)
Q Consensus 164 N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~L~~N~l~-~~~p---~~l 222 (956)
|.+++ .++..+.++++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.++ ..+
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 183 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTF 183 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHH
Confidence 87776 3566677777777777777777643333332 22 66666666666665 2233 244
Q ss_pred CCcchhhhhcccCCcCCCC----CCchhccCCCCCcEEeccCCCCc----c-CCCCCCCCCCccEEEccCCcCCCC----
Q 002174 223 SELPKLLILQLDNNNFEGT----TIPASYSNMSKLLKLSLRNCSLQ----G-PMPDLSRIPNLGYLDLSSNQLNGS---- 289 (956)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~----~~p~~~~~l~~L~~L~Ls~N~l~----~-~~~~~~~l~~L~~L~Ls~N~l~~~---- 289 (956)
..+++|++|+|++|+++.. ..+..+..+++|+.|+|++|.++ . .+..+..+++|++|+|++|.|++.
T Consensus 184 ~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~ 263 (386)
T 2ca6_A 184 QSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAA 263 (386)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHH
T ss_pred HhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHH
Confidence 4555666666666665411 12224555666666666666653 1 222345555666666666665533
Q ss_pred CCCCC---CccccCEEEccCCcCCC----Ccchhc-CCCCcCCeEecccccCCCcC
Q 002174 290 IPPGR---LSLNITTIKLSNNKLTG----TIPSNF-SGLPRLQRLFIANNSLSGSI 337 (956)
Q Consensus 290 ~p~~~---~~~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~i 337 (956)
++... ...+|++|+|++|.+++ .+|..+ .++++|+.|+|++|++++..
T Consensus 264 l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 264 VVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred HHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 12211 12345555555555554 244444 44555555555555555444
No 345
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.85 E-value=9.6e-24 Score=240.00 Aligned_cols=242 Identities=18% Similarity=0.270 Sum_probs=180.0
Q ss_pred cCCccccCCcccchhhccCCCCCCCCC----cccCCCccccceeeccc---cccCCCCccc-------cccccCCeeecc
Q 002174 121 SIPKEIGNIKSLELLLLNGNELTGSLP----EELGYLPKLDRIQIDQN---YISGSLPKSF-------ANLNKTRHFHMN 186 (956)
Q Consensus 121 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~ 186 (956)
.++..+..+++|++|+|++|.+++..+ ..+..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 567788889999999999999986633 44778999999999996 4555566655 688999999999
Q ss_pred cCcccC----CCccccCCccccceeccccccccCCCCcccC----Cc---------chhhhhcccCCcCCCCCCc---hh
Q 002174 187 NNSISG----QIPPELSRLPSLVHMLLDNNNLTGYLPPELS----EL---------PKLLILQLDNNNFEGTTIP---AS 246 (956)
Q Consensus 187 ~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~----~l---------~~L~~L~Ls~N~l~~~~~p---~~ 246 (956)
+|.++. .++..+..+++|++|+|++|.+++..+..+. .+ ++|++|+|++|+++...++ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 999987 4777888899999999999999754444333 33 7888999999988733455 46
Q ss_pred ccCCCCCcEEeccCCCCc--c---CCC-CCCCCCCccEEEccCCcCC----CCCCCCCC-ccccCEEEccCCcCCCC---
Q 002174 247 YSNMSKLLKLSLRNCSLQ--G---PMP-DLSRIPNLGYLDLSSNQLN----GSIPPGRL-SLNITTIKLSNNKLTGT--- 312 (956)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~--~---~~~-~~~~l~~L~~L~Ls~N~l~----~~~p~~~~-~~~L~~L~Ls~N~l~~~--- 312 (956)
+..+++|+.|+|++|+++ + ..+ .+..+++|++|+|++|.++ +.+|..+. ..+|++|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 778888999999999887 2 233 6778888888888888885 34554333 23788888888888765
Q ss_pred -cchhc--CCCCcCCeEecccccCCC----cCChhhhhhccCCCCcceEEEccCCCCCCCC
Q 002174 313 -IPSNF--SGLPRLQRLFIANNSLSG----SIPSSIWQSRTLNATETFILDFQNNNLTNIS 366 (956)
Q Consensus 313 -~p~~~--~~l~~L~~L~L~~N~l~~----~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~ 366 (956)
++..+ +.+++|+.|+|++|++++ .+|..+.. +.+.|+.|+|++|+++...
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~----~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE----KMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHH----HCTTCCEEECTTSBSCTTS
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHh----cCCCceEEEccCCcCCcch
Confidence 45666 337888888888888876 36665522 1234557888888777654
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=5.3e-21 Score=210.06 Aligned_cols=190 Identities=21% Similarity=0.368 Sum_probs=111.1
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceee
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|++.++++.. ++ .+..+++|++|+|++|++++ ++. +.++++|++|+|++|++++. ..+..+++|++|+|
T Consensus 41 ~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~-~~~-~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l 114 (308)
T 1h6u_A 41 DGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITD-LAP-LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDL 114 (308)
T ss_dssp HTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEEC
T ss_pred CCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCC-Chh-HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEEC
Confidence 356666666666654 22 46666666666666666664 332 66666666666666666642 24666666666666
Q ss_pred ccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCC
Q 002174 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
++|++++. + .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++
T Consensus 115 ~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~- 187 (308)
T 1h6u_A 115 TSTQITDV-T-PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISD- 187 (308)
T ss_dssp TTSCCCCC-G-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-
T ss_pred CCCCCCCc-h-hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCc-
Confidence 66666643 2 26666666666666666664332 5566666666666666664322 5556666666666666653
Q ss_pred CCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCC
Q 002174 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 287 (956)
++. +..+++|+.|+|++|++++.++ +..+++|+.|+|++|+++
T Consensus 188 -~~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 188 -ISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp -CGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEE
T ss_pred -Chh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeee
Confidence 221 5555666666666666555442 555555555555555554
No 347
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.1e-21 Score=231.56 Aligned_cols=202 Identities=27% Similarity=0.368 Sum_probs=145.7
Q ss_pred CCCCC-CCCCCC---CCCce-eecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCC
Q 002174 55 SNWNR-GDPCTS---NWTGV-LCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNI 129 (956)
Q Consensus 55 ~~W~~-~~~c~~---~w~gv-~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l 129 (956)
.+|.. .++|.. .|.|+ .|... +++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+
T Consensus 34 ~~W~~~~~~~~~~~~~~~~l~~C~~~-------~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l 99 (571)
T 3cvr_A 34 DKWEKQALPGENRNEAVSLLKECLIN-------QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELP 99 (571)
T ss_dssp HHHHTTCCTTCCHHHHHHHHHHHHHT-------TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCC
T ss_pred HHHhccCCccccccchhhhccccccC-------CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---ccc
Confidence 34532 455632 48998 78532 68999999999997 777664 89999999999999 688 557
Q ss_pred cccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceecc
Q 002174 130 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209 (956)
Q Consensus 130 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 209 (956)
++|++|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|++|+|
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 999999999999997 777 765 99999999999996 555 67889999999999985 555 5678888888
Q ss_pred ccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCC-------cEEeccCCCCccCCCCCCCCCCccEEEcc
Q 002174 210 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKL-------LKLSLRNCSLQGPMPDLSRIPNLGYLDLS 282 (956)
Q Consensus 210 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls 282 (956)
++|+|++ +|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+..+..+..+++|+.|+|+
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~--~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L~ 238 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE--SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIILE 238 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS--SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEECC
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC--chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEee
Confidence 8888886 555 55 77777888888776 3454 433 44 55555555555444444445555555555
Q ss_pred CCcCCCCCC
Q 002174 283 SNQLNGSIP 291 (956)
Q Consensus 283 ~N~l~~~~p 291 (956)
+|+|++.+|
T Consensus 239 ~N~l~~~~p 247 (571)
T 3cvr_A 239 DNPLSSRIR 247 (571)
T ss_dssp SSSCCHHHH
T ss_pred CCcCCCcCH
Confidence 555544333
No 348
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.84 E-value=9.5e-23 Score=227.07 Aligned_cols=249 Identities=18% Similarity=0.224 Sum_probs=198.9
Q ss_pred CCCEEEccCCCCcccCCccccCC--cccchhhccCCCCCCCCCcccCCCccccceeeccccccCC-CCccccccccCCee
Q 002174 107 YLTILDFMWNKISGSIPKEIGNI--KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGS-LPKSFANLNKTRHF 183 (956)
Q Consensus 107 ~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 183 (956)
.++.|++++|.+. +..+..+ ++|+.|++++|.+++..+. +..+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999999887 5667777 8999999999999977666 56899999999999999865 78889999999999
Q ss_pred ecccCcccCCCccccCCccccceeccccc-cccCC-CCcccCCcchhhhhcccCC-cCCCCCCchhccCCC-CCcEEecc
Q 002174 184 HMNNNSISGQIPPELSRLPSLVHMLLDNN-NLTGY-LPPELSELPKLLILQLDNN-NFEGTTIPASYSNMS-KLLKLSLR 259 (956)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~~~p~~~~~l~-~L~~L~Ls 259 (956)
+|++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++..++..+..++ +|++|+|+
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999888889999999999999999 67753 5666888999999999999 887533677889999 99999999
Q ss_pred CCC--Cc--cCCCCCCCCCCccEEEccCCc-CCCCCCCCCCc-cccCEEEccCCc-CCCCcchhcCCCCcCCeEeccccc
Q 002174 260 NCS--LQ--GPMPDLSRIPNLGYLDLSSNQ-LNGSIPPGRLS-LNITTIKLSNNK-LTGTIPSNFSGLPRLQRLFIANNS 332 (956)
Q Consensus 260 ~N~--l~--~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~-~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~ 332 (956)
+|. ++ +.+..+..+++|++|++++|. +++..+..... .+|++|+|++|. +.......+.++++|+.|+|++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 994 54 223346678999999999999 66555554333 489999999995 43333346888999999999999
Q ss_pred CCCcCChhhhhhccCCCCcceEEEccCCCCCCCCC
Q 002174 333 LSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG 367 (956)
Q Consensus 333 l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~ 367 (956)
++.. .+..+. ..+..|++++|++++...
T Consensus 283 i~~~---~~~~l~----~~l~~L~l~~n~l~~~~~ 310 (336)
T 2ast_B 283 VPDG---TLQLLK----EALPHLQINCSHFTTIAR 310 (336)
T ss_dssp SCTT---CHHHHH----HHSTTSEESCCCSCCTTC
T ss_pred cCHH---HHHHHH----hhCcceEEecccCccccC
Confidence 4322 233322 123457789999987543
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=1.9e-20 Score=193.30 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=42.0
Q ss_pred ccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccc
Q 002174 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (956)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (956)
+|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 33344444444433333333334444444444444433333333344444444444444443333333444444444444
Q ss_pred cccccCCCCcccCCcchhhhhcccCCcC
Q 002174 211 NNNLTGYLPPELSELPKLLILQLDNNNF 238 (956)
Q Consensus 211 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 238 (956)
+|++++..+..|..+++|++|+|++|++
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCcc
Confidence 4444433333333333333333333333
No 350
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=5.4e-20 Score=191.49 Aligned_cols=194 Identities=20% Similarity=0.308 Sum_probs=114.5
Q ss_pred ceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccC
Q 002174 205 VHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSS 283 (956)
Q Consensus 205 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~ 283 (956)
+.+++++|.++ .+|..+. ++|+.|+|++|++++ ..+..|.++++|+.|+|++|++++..+ .|..+++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~-i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKV-IPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCE-ECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCC-cCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 46777777777 3454443 566777777777764 344466667777777777777766544 366666666666666
Q ss_pred CcCCCCCCCCCC--ccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCC
Q 002174 284 NQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNN 361 (956)
Q Consensus 284 N~l~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~ 361 (956)
|+|+ .+|...+ ..+|+.|+|++|+|++..|..|.++++|+.| +|++|+
T Consensus 90 N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L-----------------------------~L~~N~ 139 (220)
T 2v9t_B 90 NKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLL-----------------------------SLYDNK 139 (220)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE-----------------------------ECCSSC
T ss_pred CcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEE-----------------------------ECCCCc
Confidence 6666 3333221 1245555555555554444455555555544 555555
Q ss_pred CCCCCCC-C-CCCCCcEEEecCCcccccCCcccccCCCCCCCcccccCCCCCCCcccCcCCCCCccCCCCCCcceeec
Q 002174 362 LTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQSCPTDYEYSPTSPIRCFCAA 437 (956)
Q Consensus 362 L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~p~~~~~~~c~~ 437 (956)
|++++.. + .++.+..|+|++|||.|||++.||..|+..... ....+.|..|.-.......-.+.....|..
T Consensus 140 l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~l~~~~~-----~~~~~~C~~P~~l~g~~l~~l~~~~~~c~~ 212 (220)
T 2v9t_B 140 LQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADYLHTNPI-----ETSGARCTSPRRLANKRIGQIKSKKFRCSA 212 (220)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCC-----BCSCCBEEESGGGTTCBGGGSCGGGCCC--
T ss_pred CCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHHHHhCCC-----CccCCCcCCchHHcCCchhhCCHHHCcCcc
Confidence 5444433 2 366788999999999999999999888654321 123456776544444444444555555644
No 351
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=4.3e-20 Score=207.70 Aligned_cols=24 Identities=17% Similarity=0.121 Sum_probs=19.4
Q ss_pred cEEEecCCcccccCCcccc-cCCCC
Q 002174 375 VTVRLRGNPFCLNTNAEQF-CGSHS 398 (956)
Q Consensus 375 ~~l~l~~Np~~c~c~~~~~-~~~~~ 398 (956)
..|+|++|||.|||++.++ ..|..
T Consensus 192 ~~l~l~~N~~~C~C~l~~~~~~~~~ 216 (361)
T 2xot_A 192 NGLYLHNNPLECDCKLYQLFSHWQY 216 (361)
T ss_dssp TTEECCSSCEECCHHHHHHHHHHHH
T ss_pred ceEEecCCCccCCcCcHHHHHHHHH
Confidence 5689999999999998875 45554
No 352
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=5.7e-20 Score=191.32 Aligned_cols=163 Identities=19% Similarity=0.234 Sum_probs=92.5
Q ss_pred eeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCC
Q 002174 206 HMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSN 284 (956)
Q Consensus 206 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N 284 (956)
.+++++|.++. +|..+. ..+++|+|++|++++...+..|.++++|+.|+|++|++++.++ .|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555542 333332 2344555555555542122345566666666666666666554 3556666666666665
Q ss_pred cCCCCCCCCCC-ccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCC
Q 002174 285 QLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLT 363 (956)
Q Consensus 285 ~l~~~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~ 363 (956)
+|++..+..+. ..+|++|+|++|+|++..|..|.++++|+.|+|++|+|++..|..|.
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--------------------- 150 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD--------------------- 150 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT---------------------
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc---------------------
Confidence 55533222221 12445555555555555555555555555555555555544444433
Q ss_pred CCCCCCCCCCCcEEEecCCcccccCCcccccCCCC
Q 002174 364 NISGSFNIPPNVTVRLRGNPFCLNTNAEQFCGSHS 398 (956)
Q Consensus 364 ~l~~~~~~~~l~~l~l~~Np~~c~c~~~~~~~~~~ 398 (956)
.++.+..|++++|||.|+|++.+|..|+.
T Consensus 151 ------~l~~L~~L~L~~N~l~c~c~l~~l~~~~~ 179 (220)
T 2v70_A 151 ------TLHSLSTLNLLANPFNCNCYLAWLGEWLR 179 (220)
T ss_dssp ------TCTTCCEEECCSCCEECSGGGHHHHHHHH
T ss_pred ------CCCCCCEEEecCcCCcCCCchHHHHHHHH
Confidence 25667889999999999999999988875
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=2.2e-19 Score=188.12 Aligned_cols=155 Identities=22% Similarity=0.276 Sum_probs=117.8
Q ss_pred CCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCC
Q 002174 65 SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG 144 (956)
Q Consensus 65 ~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (956)
|+|++|.|.+.. +. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+.
T Consensus 19 Cs~~~v~c~~~~-----------------l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 19 CSGTTVDCRSKR-----------------HA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp EETTEEECTTSC-----------------CS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred EeCCEeEccCCC-----------------cC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 369999996532 22 3444443 788888888888888778888888888888888888876
Q ss_pred CCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCC
Q 002174 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSE 224 (956)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~ 224 (956)
..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|..
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 66666788888888888888888776777788888888888888887 66777777788888888888777666666777
Q ss_pred cchhhhhcccCCcCCC
Q 002174 225 LPKLLILQLDNNNFEG 240 (956)
Q Consensus 225 l~~L~~L~Ls~N~l~~ 240 (956)
+++|+.|+|++|.+.+
T Consensus 158 l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CTTCCEEECTTSCBCT
T ss_pred CCCCCEEEeeCCCccC
Confidence 7777777777777654
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=1.9e-19 Score=187.33 Aligned_cols=159 Identities=21% Similarity=0.239 Sum_probs=111.5
Q ss_pred CCCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCC
Q 002174 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 140 (956)
..|.|.|..|.|.+ ++++ .+|..+. ++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 7 ~~C~C~~~~v~c~~-----------------~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N 66 (220)
T 2v9t_B 7 AACTCSNNIVDCRG-----------------KGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNN 66 (220)
T ss_dssp TTSEEETTEEECTT-----------------SCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSS
T ss_pred CCCEECCCEEEcCC-----------------CCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCC
Confidence 45666677777743 3333 3444443 57788888888887666667777888888888888
Q ss_pred CCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCc
Q 002174 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (956)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 220 (956)
++++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..+.
T Consensus 67 ~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 67 QISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp CCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred cCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 88777777777777787787777777765556667777777777777777766677777777777777777777766655
Q ss_pred ccCCcchhhhhcccCCcCC
Q 002174 221 ELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 221 ~l~~l~~L~~L~Ls~N~l~ 239 (956)
.|..+++|+.|+|++|.+.
T Consensus 147 ~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp TTTTCTTCCEEECCSSCEE
T ss_pred HHhCCCCCCEEEeCCCCcC
Confidence 6666666666666666664
No 355
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=3.5e-19 Score=185.37 Aligned_cols=152 Identities=18% Similarity=0.201 Sum_probs=119.2
Q ss_pred EEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCC-ccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIP-KEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 86 ~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
.++++++.++. +|..+. ..+++|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 34555566653 565553 356889999999887654 44788888899999888888777778888888888888888
Q ss_pred cccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
+|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+.+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 8887777778888888888888888887778888888888888888888887777777777777777777777764
No 356
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=3.4e-20 Score=226.75 Aligned_cols=231 Identities=18% Similarity=0.214 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHhccCC-CCCCCCCCCC-CCCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCC---
Q 002174 34 PIEVSALRSIKKSLVDD-YSKLSNWNRG-DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYL--- 108 (956)
Q Consensus 34 ~~~~~al~~~k~~~~~~-~~~l~~W~~~-~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L--- 108 (956)
..++++|.++..++... ......|... .++ +.|.++.++.. +++.|+|.++++... +..+.....|
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~-------~~~~l~L~~n~~~~~-~~~~l~~l~Ls~~ 201 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPS-GTATNSAVSTP-------LTPKIELFANGKDEA-NQALLQHKKLSQY 201 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCcc-ccCCCceecCC-------ccceEEeeCCCCCcc-hhhHhhcCccCcc
Confidence 45688899988777432 2223456543 333 35888887653 688899988888763 3332222222
Q ss_pred --CEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecc
Q 002174 109 --TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMN 186 (956)
Q Consensus 109 --~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 186 (956)
..++++.|.+. ..|..|..+++|++|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|.++++|++|+|+
T Consensus 202 ~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls 278 (727)
T 4b8c_D 202 SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLS 278 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECT
T ss_pred cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCc
Confidence 22333334444 45667778888888888888887 67777778888888888888887 777778888888888888
Q ss_pred cCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCC-CcEEeccCCCCcc
Q 002174 187 NNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSK-LLKLSLRNCSLQG 265 (956)
Q Consensus 187 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~-L~~L~Ls~N~l~~ 265 (956)
+|.|+ .+|..|+.+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++ .+|..+..+.. +..|+|++|.+++
T Consensus 279 ~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~~~~~~~l~l~~N~l~~ 355 (727)
T 4b8c_D 279 HNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK-QFLKILTEKSVTGLIFYLRDNRPEI 355 (727)
T ss_dssp TSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS-HHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred CCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC-CChHHHhhcchhhhHHhhccCcccC
Confidence 88887 66777888888888888888876 566677778888888888888776 56666654322 2235666666665
Q ss_pred CCCCCCCCCCccEEEccCC
Q 002174 266 PMPDLSRIPNLGYLDLSSN 284 (956)
Q Consensus 266 ~~~~~~~l~~L~~L~Ls~N 284 (956)
..| ..|+.|+++.|
T Consensus 356 ~~p-----~~l~~l~l~~n 369 (727)
T 4b8c_D 356 PLP-----HERRFIEINTD 369 (727)
T ss_dssp CCC-----CC---------
T ss_pred cCc-----cccceeEeecc
Confidence 444 23444455444
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=3.3e-19 Score=194.01 Aligned_cols=85 Identities=24% Similarity=0.303 Sum_probs=42.7
Q ss_pred ccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeE
Q 002174 247 YSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRL 326 (956)
Q Consensus 247 ~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 326 (956)
+..+++|+.|+|++|++++. +.+..+++|+.|++++|++++..+ .....+|+.|+|++|.|++. + .+..+++|+.|
T Consensus 130 l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L 205 (291)
T 1h6t_A 130 LVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVL 205 (291)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEE
T ss_pred hcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEE
Confidence 33444444444444444433 234444444444444444443222 11222455555555555532 3 37778888888
Q ss_pred ecccccCCC
Q 002174 327 FIANNSLSG 335 (956)
Q Consensus 327 ~L~~N~l~~ 335 (956)
++++|+++.
T Consensus 206 ~l~~n~i~~ 214 (291)
T 1h6t_A 206 ELFSQECLN 214 (291)
T ss_dssp EEEEEEEEC
T ss_pred ECcCCcccC
Confidence 888888774
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=3.7e-19 Score=212.16 Aligned_cols=172 Identities=30% Similarity=0.415 Sum_probs=98.5
Q ss_pred ccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCC
Q 002174 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (956)
Q Consensus 102 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (956)
+..|++|+.|+|++|.+.. ++ .|..+++|+.|+|++|+|++..| +..+++|+.|+|++|.|++ ++ .+..+++|+
T Consensus 39 ~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~ 112 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLK 112 (605)
T ss_dssp HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCC
T ss_pred hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCC
Confidence 3455556666666666552 33 35556666666666666654333 5556666666666666553 22 455566666
Q ss_pred eeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
.|+|++|+|++. ..+..+++|+.|+|++|+|++. ..|..+++|+.|+|++|++++ ..| +..+++|+.|+|++|
T Consensus 113 ~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-~~~--l~~l~~L~~L~Ls~N 185 (605)
T 1m9s_A 113 SLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD-IVP--LAGLTKLQNLYLSKN 185 (605)
T ss_dssp EEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCC-CGG--GTTCTTCCEEECCSS
T ss_pred EEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCC-chh--hccCCCCCEEECcCC
Confidence 666666666532 2355566666666666666643 455566666666666666654 222 556666666666666
Q ss_pred CCccCCCCCCCCCCccEEEccCCcCC
Q 002174 262 SLQGPMPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 262 ~l~~~~~~~~~l~~L~~L~Ls~N~l~ 287 (956)
.|++. +.+..+++|+.|+|++|++.
T Consensus 186 ~i~~l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 186 HISDL-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CCCBC-GGGTTCTTCSEEECCSEEEE
T ss_pred CCCCC-hHHccCCCCCEEEccCCcCc
Confidence 66554 34556666666666666665
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=4e-19 Score=193.31 Aligned_cols=171 Identities=29% Similarity=0.407 Sum_probs=93.9
Q ss_pred cCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCe
Q 002174 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 103 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|+|++|++++ ++ .+..+++|++
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~ 116 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKS 116 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCE
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCE
Confidence 345556666666666653 33 35556666666666666654333 5566666666666666553 22 2555566666
Q ss_pred eecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCC
Q 002174 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (956)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (956)
|+|++|++++. ..+..+++|++|+|++|++++. ..+..+++|+.|+|++|++++ ++. +..+++|+.|+|++|.
T Consensus 117 L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~--~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 117 LSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD--IVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp EECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC--CGG-GTTCTTCCEEECCSSC
T ss_pred EECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc--chh-hcCCCccCEEECCCCc
Confidence 66666665532 3455555666666666655543 345555555555555555553 122 5555556666666665
Q ss_pred CccCCCCCCCCCCccEEEccCCcCC
Q 002174 263 LQGPMPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 263 l~~~~~~~~~l~~L~~L~Ls~N~l~ 287 (956)
+++.+ .+..+++|+.|++++|+++
T Consensus 190 i~~l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 190 ISDLR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CCBCG-GGTTCTTCSEEEEEEEEEE
T ss_pred CCCCh-hhccCCCCCEEECcCCccc
Confidence 55432 3555555555555555554
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=2.7e-19 Score=213.45 Aligned_cols=190 Identities=19% Similarity=0.354 Sum_probs=98.4
Q ss_pred CCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeeccc
Q 002174 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (956)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (956)
+..+.|..+.+...++ +..|.+|+.|+|++|.+.. ++ .+..|++|+.|+|++|+|++..+ +..+++|+.|+|++
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 3344444455543322 3455556666666665552 22 35555555555555555554333 55555555555555
Q ss_pred CcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCC
Q 002174 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPM 267 (956)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 267 (956)
|.|++ ++ .+..+++|+.|+|++|+|++. ..+ ..+++|+.|+|++|.+++.
T Consensus 97 N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l-------------------------~~l~~L~~L~Ls~N~l~~l- 146 (605)
T 1m9s_A 97 NKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGL-------------------------VHLPQLESLYLGNNKITDI- 146 (605)
T ss_dssp SCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGG-------------------------GGCTTCSEEECCSSCCCCC-
T ss_pred CCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccc-------------------------cCCCccCEEECCCCccCCc-
Confidence 55553 22 344555555555555555432 234 4444455555555544443
Q ss_pred CCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCc
Q 002174 268 PDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (956)
Q Consensus 268 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (956)
+.+..+++|+.|+|++|.|++..| .....+|+.|+|++|.|++. ..+..+++|+.|+|++|++.+.
T Consensus 147 ~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 147 TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 334444555555555555553333 22223555555555555543 3467777777777777777754
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=5.8e-19 Score=198.41 Aligned_cols=176 Identities=21% Similarity=0.266 Sum_probs=143.4
Q ss_pred EEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCcccc-CCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 86 ELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 86 ~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
.+++++++|+. +|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45556666664 555554 3588999999999977777777 8999999999999999877788999999999999999
Q ss_pred cccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCccc---CCcchhhhhcccCCcCCCC
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPEL---SELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~Ls~N~l~~~ 241 (956)
+|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..| ..+++|+.|+|++|+|++
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~- 177 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK- 177 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC-
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc-
Confidence 9987777789999999999999999998888889999999999999999997655555 568899999999999985
Q ss_pred CCchhccCCCC--CcEEeccCCCCcc
Q 002174 242 TIPASYSNMSK--LLKLSLRNCSLQG 265 (956)
Q Consensus 242 ~~p~~~~~l~~--L~~L~Ls~N~l~~ 265 (956)
..+..+..+++ |+.|+|++|.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred cCHHHhhhccHhhcceEEecCCCccC
Confidence 34467788876 4889999998863
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=6.2e-21 Score=226.18 Aligned_cols=204 Identities=16% Similarity=0.122 Sum_probs=121.9
Q ss_pred cCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCe
Q 002174 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 103 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
...++|+.|+|++|+|+ .+|..++++++|+.|++++|......| . .+..+++.+.+|..+.++++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~----------~-ll~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTII----------L-LMRALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHH----------H-HHHHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHH----------H-HHHhcccccCCHHHHHHHHhccc
Confidence 45666666777777665 566667777777777765554100000 0 00111233455556666666666
Q ss_pred ee-cccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 183 FH-MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 183 L~-L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
|+ ++.|.+ .+|..+.+++|.++...+ ..|+.|+|++|.+++ +|. ++++++|+.|+|++|
T Consensus 414 L~~l~~n~~-----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~--lp~-~~~l~~L~~L~Ls~N 473 (567)
T 1dce_A 414 VDPMRAAYL-----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV--LCH-LEQLLLVTHLDLSHN 473 (567)
T ss_dssp HCGGGHHHH-----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS--CCC-GGGGTTCCEEECCSS
T ss_pred Ccchhhccc-----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC--CcC-ccccccCcEeecCcc
Confidence 66 555443 245555555555553221 135566666666653 344 666666666666666
Q ss_pred CCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCc-chhcCCCCcCCeEecccccCCCcCCh
Q 002174 262 SLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSGSIPS 339 (956)
Q Consensus 262 ~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ip~ 339 (956)
+|+..+..+..+++|+.|+|++|+|++ +|......+|+.|+|++|+|++.. |..|+++++|+.|+|++|+|++.+|.
T Consensus 474 ~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 474 RLRALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cccccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 666554556666666666666666664 452222336777777777777766 88888888888888888888876553
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=4.8e-18 Score=177.92 Aligned_cols=153 Identities=19% Similarity=0.253 Sum_probs=93.7
Q ss_pred CEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccC
Q 002174 109 TILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (956)
Q Consensus 109 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (956)
+.+++++++++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|+|+...+..|.++++|+.|+|++|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N 98 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTN 98 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCC
Confidence 34666667766 5665443 56777777777777666666666666666666666665444444555555555555555
Q ss_pred cccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC
Q 002174 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (956)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 268 (956)
+|++.. +..|..+++|++|+|++|+++ .+|..+.++++|+.|+|++|+|++.++
T Consensus 99 ~l~~l~------------------------~~~~~~l~~L~~L~Ls~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 99 QLTVLP------------------------SAVFDRLVHLKELFMCCNKLT--ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp CCCCCC------------------------TTTTTTCTTCCEEECCSSCCC--SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred cCCccC------------------------hhHhCcchhhCeEeccCCccc--ccCcccccCCCCCEEECCCCcCCccCH
Confidence 555443 344444555555555555554 345556666677777777777766655
Q ss_pred C-CCCCCCccEEEccCCcCCCCC
Q 002174 269 D-LSRIPNLGYLDLSSNQLNGSI 290 (956)
Q Consensus 269 ~-~~~l~~L~~L~Ls~N~l~~~~ 290 (956)
. +..+++|+.|+|++|.+.+..
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTB
T ss_pred HHHhCCCCCCEEEeeCCCccCCc
Confidence 3 667777777888888776543
No 364
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.74 E-value=2.6e-18 Score=183.33 Aligned_cols=136 Identities=19% Similarity=0.108 Sum_probs=107.5
Q ss_pred CCCCCeeeeeCCeeEEEEEe-CCCcE--EEEEEecCCChh------------------------hHHHHHHHHHHHHhcC
Q 002174 626 FNSSTQIGQGGYGKVYKGIL-PDGTV--VAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 678 (956)
Q Consensus 626 ~~~~~~lG~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 678 (956)
|++.+.||+|+||.||+|.. .+|+. ||||+++..... ....+.+|++.+++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999997 68888 999987543111 1236789999999998
Q ss_pred CCce--eeeecccccCCcEEEEEecCCC-C----CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCEeccC
Q 002174 679 HRNL--VSLVGYCDEEGEQMLVYEFMSN-G----TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRD 750 (956)
Q Consensus 679 h~nI--v~l~~~~~~~~~~~LV~E~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~D 750 (956)
|+++ ..++++ +..+|||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8764 333332 356899999942 3 77776532 235567889999999999999 888 99999
Q ss_pred CCcccEEEcCCCcEEEEeecccccc
Q 002174 751 IKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 751 lk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 365
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.74 E-value=1.4e-20 Score=226.39 Aligned_cols=295 Identities=15% Similarity=0.095 Sum_probs=157.5
Q ss_pred eeEEEeCCCC-ccc-cCCcCccCCCCCCEEEccCCCCccc----CCccccCCcccchhhccCCCCCCC----CCcccCCC
Q 002174 84 LRELQLLNLN-LSG-NLSPEIGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTGS----LPEELGYL 153 (956)
Q Consensus 84 l~~L~L~~~~-l~~-~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l 153 (956)
++.|+|.+|. ++. .++..+.++++|++|+|++|.+++. ++..+.++++|++|+|++|.+++. ++..+.++
T Consensus 140 L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~ 219 (592)
T 3ogk_B 140 LETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNC 219 (592)
T ss_dssp CCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHC
T ss_pred CcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhC
Confidence 7888887775 221 1222334677888888888877654 334456677788888888877632 33344567
Q ss_pred ccccceeeccccccCCCCccccccccCCeeecccCccc--------------------------CCCccccCCcccccee
Q 002174 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSIS--------------------------GQIPPELSRLPSLVHM 207 (956)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--------------------------~~~p~~l~~l~~L~~L 207 (956)
++|++|+|++|.+.+ ++..+.++++|++|+++.+... ..+|..+..+++|++|
T Consensus 220 ~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L 298 (592)
T 3ogk_B 220 RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKL 298 (592)
T ss_dssp TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEE
T ss_pred CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEE
Confidence 778888888877764 5566666666666666542221 1233444445555555
Q ss_pred ccccccccCCCC-cccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccC-----------CCCccCC-CC-CCCC
Q 002174 208 LLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN-----------CSLQGPM-PD-LSRI 273 (956)
Q Consensus 208 ~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~-----------N~l~~~~-~~-~~~l 273 (956)
+|++|.+++... ..+..+++|+.|+|+ |.+....++..+..+++|++|+|++ |.++... .. ...+
T Consensus 299 ~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 377 (592)
T 3ogk_B 299 DLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGC 377 (592)
T ss_dssp EETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHC
T ss_pred ecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhC
Confidence 555555442222 223445555555555 2232212233334455555666552 3333211 11 2235
Q ss_pred CCccEEEccCCcCCCCCCCCCC--ccccCEEEcc----CCcCCCC-----cchhcCCCCcCCeEecccc--cCCCcCChh
Q 002174 274 PNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLS----NNKLTGT-----IPSNFSGLPRLQRLFIANN--SLSGSIPSS 340 (956)
Q Consensus 274 ~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~N--~l~~~ip~~ 340 (956)
++|++|+++.|.+++..+.... ..+|+.|+|+ .|.+++. ++..+.++++|+.|+|++| .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 5666666666665543332221 2256666664 5555543 3333555666666666532 244444333
Q ss_pred hhhhccCCCCcceEEEccCCCCCC--CCCCC-CCCCCcEEEecCCcc
Q 002174 341 IWQSRTLNATETFILDFQNNNLTN--ISGSF-NIPPNVTVRLRGNPF 384 (956)
Q Consensus 341 ~~~l~~l~~~~L~~L~Ls~N~L~~--l~~~~-~~~~l~~l~l~~Np~ 384 (956)
+.. ..++|+.|+|++|+++. ++... .+++++.|++++|++
T Consensus 458 ~~~----~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 458 IGQ----YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHH----SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred HHH----hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 322 12346677777777664 22221 356777777777774
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.74 E-value=2.1e-20 Score=221.72 Aligned_cols=200 Identities=21% Similarity=0.237 Sum_probs=153.0
Q ss_pred CCccccceeeccccccCCCCccccccccCCeeecccCc-------------ccCCCccccCCccccceec-cccccccCC
Q 002174 152 YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNS-------------ISGQIPPELSRLPSLVHML-LDNNNLTGY 217 (956)
Q Consensus 152 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-L~~N~l~~~ 217 (956)
.+++|+.|+|++|+|+ .+|..++++++|+.|++++|. +.+..|..++.+++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3444555555555554 445555555555555554443 4566777888888888888 676654
Q ss_pred CCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCcc
Q 002174 218 LPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL 297 (956)
Q Consensus 218 ~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 297 (956)
.+|..+.+++|.++. ++. ..|+.|+|++|.|++.+. +..+++|+.|+|++|+|+ .+|..+...
T Consensus 423 --------~~L~~l~l~~n~i~~--l~~-----~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 --------DDLRSKFLLENSVLK--MEY-----ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp --------HHHHHHHHHHHHHHH--HHH-----TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred --------chhhhhhhhcccccc--cCc-----cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 467888888888863 222 258999999999999755 999999999999999999 788766544
Q ss_pred -ccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcC-ChhhhhhccCCCCcceEEEccCCCCCCCCCCC-----C
Q 002174 298 -NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSI-PSSIWQSRTLNATETFILDFQNNNLTNISGSF-----N 370 (956)
Q Consensus 298 -~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~i-p~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~-----~ 370 (956)
+|+.|+|++|+|++ +| .|+++++|+.|+|++|+|++.+ |..+..+.. |+.|+|++|+|++++... .
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~-----L~~L~L~~N~l~~~~~~~~~l~~~ 558 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPR-----LVLLNLQGNSLCQEEGIQERLAEM 558 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTT-----CCEEECTTSGGGGSSSCTTHHHHH
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCC-----CCEEEecCCcCCCCccHHHHHHHH
Confidence 89999999999997 56 8999999999999999999887 999887655 459999999999987754 2
Q ss_pred CCCCcEEEe
Q 002174 371 IPPNVTVRL 379 (956)
Q Consensus 371 ~~~l~~l~l 379 (956)
+|.+..|++
T Consensus 559 lp~L~~L~l 567 (567)
T 1dce_A 559 LPSVSSILT 567 (567)
T ss_dssp CTTCSEEEC
T ss_pred CcccCccCC
Confidence 788888754
No 367
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.74 E-value=3.9e-20 Score=222.59 Aligned_cols=296 Identities=13% Similarity=0.090 Sum_probs=201.5
Q ss_pred ceeeEEEeCCCCcccc----CCcCccCCCCCCEEEccCCCCc----ccCCccccCCcccchhhccCCCCCCCCCcc----
Q 002174 82 LHLRELQLLNLNLSGN----LSPEIGRLSYLTILDFMWNKIS----GSIPKEIGNIKSLELLLLNGNELTGSLPEE---- 149 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~----~~~~l~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~---- 149 (956)
.+++.|+|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..
T Consensus 164 ~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~ 242 (592)
T 3ogk_B 164 RKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAA 242 (592)
T ss_dssp TTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHC
T ss_pred CCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhh
Confidence 4677778877776654 3334456677777777777776 2334445566777777777776653 3333
Q ss_pred -----------------------cCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCc-cccCCccccc
Q 002174 150 -----------------------LGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIP-PELSRLPSLV 205 (956)
Q Consensus 150 -----------------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~ 205 (956)
+..+++|+.|+++++. .+.+|..+..+++|++|+|++|.+++... ..+..+++|+
T Consensus 243 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~ 321 (592)
T 3ogk_B 243 ANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLE 321 (592)
T ss_dssp TTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCC
T ss_pred hHHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCC
Confidence 4444555555555542 23567788899999999999999865443 4468899999
Q ss_pred eecccccccc-CCCCcccCCcchhhhhccc-----------CCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCC
Q 002174 206 HMLLDNNNLT-GYLPPELSELPKLLILQLD-----------NNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSR 272 (956)
Q Consensus 206 ~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls-----------~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~ 272 (956)
+|+|+ |.+. +.++..+..+++|++|+|+ .|.+++..+...+..+++|++|+++.|.+++... .+..
T Consensus 322 ~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~ 400 (592)
T 3ogk_B 322 VLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGT 400 (592)
T ss_dssp EEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHH
T ss_pred EEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHh
Confidence 99999 4444 3334444667899999999 3666643344445678999999999999876433 2433
Q ss_pred -CCCccEEEcc----CCcCCCCCCC-----CC-CccccCEEEccCC--cCCCCcchhcCC-CCcCCeEecccccCCCcC-
Q 002174 273 -IPNLGYLDLS----SNQLNGSIPP-----GR-LSLNITTIKLSNN--KLTGTIPSNFSG-LPRLQRLFIANNSLSGSI- 337 (956)
Q Consensus 273 -l~~L~~L~Ls----~N~l~~~~p~-----~~-~~~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~i- 337 (956)
+++|+.|+++ .|.+++.... .. ...+|++|+|++| .+++..+..+.. +++|++|+|++|++++..
T Consensus 401 ~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 480 (592)
T 3ogk_B 401 YLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGL 480 (592)
T ss_dssp HCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHH
T ss_pred hCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHH
Confidence 7899999996 7778743211 11 1348999999854 477766666554 899999999999988633
Q ss_pred ChhhhhhccCCCCcceEEEccCCCCCCC--CCCC-CCCCCcEEEecCCccc
Q 002174 338 PSSIWQSRTLNATETFILDFQNNNLTNI--SGSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 338 p~~~~~l~~l~~~~L~~L~Ls~N~L~~l--~~~~-~~~~l~~l~l~~Np~~ 385 (956)
+..+.. .++|+.|+|++|.++.- +... .++.++.|++++|...
T Consensus 481 ~~~~~~-----~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 481 MEFSRG-----CPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHHHTC-----CTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCC
T ss_pred HHHHhc-----CcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCC
Confidence 332222 35677999999998642 2222 4789999999999843
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=7.1e-19 Score=188.32 Aligned_cols=169 Identities=21% Similarity=0.347 Sum_probs=110.4
Q ss_pred CCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeee
Q 002174 105 LSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (956)
Q Consensus 105 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (956)
+.++..++|++|.+++ ++ .+..+++|++|++++|.++ .++ .+..+++|++|+|++|+|++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 4455556666666663 33 4566666666666666666 334 56666666666666666664433 66666777777
Q ss_pred cccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCc
Q 002174 185 MNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQ 264 (956)
Q Consensus 185 L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~ 264 (956)
|++|++++ +|.... ++|++|+|++|++++. +.+..+++|+.|+|++|++++ ++ .+..+++|+.|+|++|+++
T Consensus 92 L~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~--~~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 92 VNRNRLKN-LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKS--IV-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp CCSSCCSC-CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCB--CG-GGGGCTTCCEEECTTSCCC
T ss_pred CCCCccCC-cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCC--Ch-HHccCCCCCEEECCCCcCc
Confidence 77777664 333222 6777777777777753 346777777777777777764 23 5777777777777777777
Q ss_pred cCCCCCCCCCCccEEEccCCcCCC
Q 002174 265 GPMPDLSRIPNLGYLDLSSNQLNG 288 (956)
Q Consensus 265 ~~~~~~~~l~~L~~L~Ls~N~l~~ 288 (956)
+. +.+..+++|+.|++++|.+++
T Consensus 164 ~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 164 NT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp BC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred ch-HHhccCCCCCEEeCCCCcccC
Confidence 76 557777777777777777763
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=7e-18 Score=172.31 Aligned_cols=152 Identities=17% Similarity=0.282 Sum_probs=72.3
Q ss_pred CCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCcccccee
Q 002174 128 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207 (956)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 207 (956)
.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..+..+..+++|++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3344444444444444 223 3444444444444444332 11234444455555555555544444445555555555
Q ss_pred ccccccccCCCCcccCCcchhhhhcccCCc-CCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcC
Q 002174 208 LLDNNNLTGYLPPELSELPKLLILQLDNNN-FEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQL 286 (956)
Q Consensus 208 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l 286 (956)
+|++|++++..+..+..+++|++|+|++|. ++. ++ .+..+++|+.|++++|.+++.. .+..+++|++|++++|++
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~--~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAITD--IM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC--CG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC--
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCccc--cH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCccc
Confidence 555555554444445555555555555554 332 22 4555555555555555555433 455555555555555555
Q ss_pred C
Q 002174 287 N 287 (956)
Q Consensus 287 ~ 287 (956)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 3
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=5.9e-18 Score=172.85 Aligned_cols=155 Identities=17% Similarity=0.249 Sum_probs=119.3
Q ss_pred ccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCC
Q 002174 102 IGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTR 181 (956)
Q Consensus 102 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 181 (956)
.+.+++|++|+|++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|+|++|++++..+..+..+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356677888888888887 566 6788888888888888665 334677888888888888888877777888888888
Q ss_pred eeecccCcccCCCccccCCccccceecccccc-ccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccC
Q 002174 182 HFHMNNNSISGQIPPELSRLPSLVHMLLDNNN-LTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRN 260 (956)
Q Consensus 182 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~ 260 (956)
+|+|++|++++..+..+..+++|++|+|++|+ ++ .++ .+..+++|++|+|++|.+++ ++ .+..+++|+.|++++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~--~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD--YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC--CT-TGGGCSSCCEEEECB
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC--hH-HhccCCCCCEEEeeC
Confidence 88888888887777788888888888888887 55 444 67888888888888888875 33 678888899999998
Q ss_pred CCCcc
Q 002174 261 CSLQG 265 (956)
Q Consensus 261 N~l~~ 265 (956)
|++.+
T Consensus 191 N~i~~ 195 (197)
T 4ezg_A 191 QTIGG 195 (197)
T ss_dssp C----
T ss_pred cccCC
Confidence 88754
No 371
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.70 E-value=3.5e-17 Score=166.42 Aligned_cols=158 Identities=18% Similarity=0.247 Sum_probs=109.4
Q ss_pred cEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCc-cccCEEEccCCcCCCCcchhcCCCCcCCeEeccccc
Q 002174 254 LKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNS 332 (956)
Q Consensus 254 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 332 (956)
+.+++++|.++..+..+. ++|++|+|++|+|+ .+|..+.. .+|+.|+|++|+|++..+..|.++++|+.|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 456666666665554432 46677777777776 55543332 267777777777777777778888888888888888
Q ss_pred CCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCCcccccCCCCCCCcccccCCCC
Q 002174 333 LSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNS 410 (956)
Q Consensus 333 l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~~ 410 (956)
|++..|..|..+. +|+.|+|++|+|+.++.. + .++.+..|+|++|||.|||++.+|..|+.... ....
T Consensus 90 l~~i~~~~f~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~~~-----~~~~ 159 (193)
T 2wfh_A 90 LRCIPPRTFDGLK-----SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKSEY-----KEPG 159 (193)
T ss_dssp CCBCCTTTTTTCT-----TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHHSS-----CCCS
T ss_pred cCEeCHHHhCCCC-----CCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHhcc-----CCCC
Confidence 8877776665544 445788888888888775 3 48889999999999999999999998875432 1223
Q ss_pred CCCcccCcCCCCCc
Q 002174 411 TLDCRAQSCPTDYE 424 (956)
Q Consensus 411 ~~~c~~~~~~~~~~ 424 (956)
.+.|..|.-.....
T Consensus 160 ~~~C~~P~~l~g~~ 173 (193)
T 2wfh_A 160 IARCAGPGEMADKL 173 (193)
T ss_dssp CCBEEESGGGTTCB
T ss_pred CcCcCCchHHCCCC
Confidence 45677654444433
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=1.3e-17 Score=178.51 Aligned_cols=171 Identities=20% Similarity=0.286 Sum_probs=109.9
Q ss_pred CCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCcccccee
Q 002174 128 NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHM 207 (956)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 207 (956)
++.++..+++++|.+++. + .+..+++|++|++++|.++. ++ .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~-~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDL-V-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSE-E-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCcccc-c-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 567788888888888743 3 57778888888888888873 44 67777788888888887775443 7777777777
Q ss_pred ccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCC
Q 002174 208 LLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 208 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 287 (956)
+|++|++++. +. +.. ++|+.|+|++|++++ + ..+.++++|+.|+|++|++++.+ .+..++
T Consensus 91 ~L~~N~l~~l-~~-~~~-~~L~~L~L~~N~l~~--~-~~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~------------- 150 (263)
T 1xeu_A 91 SVNRNRLKNL-NG-IPS-ACLSRLFLDNNELRD--T-DSLIHLKNLEILSIRNNKLKSIV-MLGFLS------------- 150 (263)
T ss_dssp ECCSSCCSCC-TT-CCC-SSCCEEECCSSCCSB--S-GGGTTCTTCCEEECTTSCCCBCG-GGGGCT-------------
T ss_pred ECCCCccCCc-Cc-ccc-CcccEEEccCCccCC--C-hhhcCcccccEEECCCCcCCCCh-HHccCC-------------
Confidence 7777777753 22 222 555666666665553 1 23555555555555555554432 233334
Q ss_pred CCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCc
Q 002174 288 GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (956)
Q Consensus 288 ~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (956)
+|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 151 ----------~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 151 ----------KLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp ----------TCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred ----------CCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 455555555555544 5677788888888888888754
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.69 E-value=1.2e-17 Score=204.29 Aligned_cols=168 Identities=24% Similarity=0.269 Sum_probs=126.5
Q ss_pred eeeEEEeCCCCccc---------cCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCC
Q 002174 83 HLRELQLLNLNLSG---------NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYL 153 (956)
Q Consensus 83 ~l~~L~L~~~~l~~---------~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 153 (956)
.+..++|+++.|.+ ..+..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|++|
T Consensus 192 ~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 269 (727)
T 4b8c_D 192 LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNL 269 (727)
T ss_dssp ------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGG
T ss_pred HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCC
Confidence 34555566655544 34678999999999999999999 78888899999999999999999 899999999
Q ss_pred ccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcch-hhhhc
Q 002174 154 PKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPK-LLILQ 232 (956)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~ 232 (956)
++|++|+|++|+|+ .+|..|.++++|++|+|++|.|+ .+|..|+.+++|++|+|++|.|++.+|..+..+.. +..|+
T Consensus 270 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~ 347 (727)
T 4b8c_D 270 SNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFY 347 (727)
T ss_dssp TTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHh
Confidence 99999999999999 78999999999999999999998 78888999999999999999999999988866533 34589
Q ss_pred ccCCcCCCCCCchhccCCCCCcEEeccCC
Q 002174 233 LDNNNFEGTTIPASYSNMSKLLKLSLRNC 261 (956)
Q Consensus 233 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N 261 (956)
|++|.+++ .+|. .|+.|++++|
T Consensus 348 l~~N~l~~-~~p~------~l~~l~l~~n 369 (727)
T 4b8c_D 348 LRDNRPEI-PLPH------ERRFIEINTD 369 (727)
T ss_dssp HHHCCCCC-CCCC------C---------
T ss_pred hccCcccC-cCcc------ccceeEeecc
Confidence 99999997 5654 4667777777
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=5.6e-17 Score=164.83 Aligned_cols=129 Identities=22% Similarity=0.273 Sum_probs=109.3
Q ss_pred EEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCc-cccCCcccchhhccCCCCCCCCCcccCCCccccceeecccc
Q 002174 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPK-EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY 165 (956)
Q Consensus 87 L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 165 (956)
|++++++++ .+|..+.. +|++|+|++|+|++..+. .|+++++|++|+|++|+|++..|..|.++++|++|+|++|+
T Consensus 13 l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 89 (192)
T 1w8a_A 13 VDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89 (192)
T ss_dssp EECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCC
T ss_pred EEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCc
Confidence 444455663 56665544 899999999999866654 48899999999999999998889999999999999999999
Q ss_pred ccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCC
Q 002174 166 ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYL 218 (956)
Q Consensus 166 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 218 (956)
|++..+..|.++++|++|+|++|+|++..|..|..+++|++|+|++|.+++..
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp CCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 99888888999999999999999999888889999999999999999988653
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=8e-17 Score=163.68 Aligned_cols=172 Identities=19% Similarity=0.264 Sum_probs=95.0
Q ss_pred cEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCC--ccccCEEEccCCcCCCCcchhcCCCCcCCeEecccc
Q 002174 254 LKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANN 331 (956)
Q Consensus 254 ~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 331 (956)
+.+++++|.++..+..+.. +|++|++++|+|++..+...+ ..+|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 3444444444443333322 455555555555433332211 225555555555555555566666666666666666
Q ss_pred cCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCC-CC-CCCCCcEEEecCCcccccCCcccccCCCCCCCcccccCCC
Q 002174 332 SLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISG-SF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTN 409 (956)
Q Consensus 332 ~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~-~~-~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~ 409 (956)
+|++..|..|..+. +|+.|+|++|+|++++. .+ .++.+..|++++|||.|+|++.+|..|+..... ..
T Consensus 89 ~l~~~~~~~~~~l~-----~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~-----~~ 158 (192)
T 1w8a_A 89 KIKEISNKMFLGLH-----QLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSL-----NG 158 (192)
T ss_dssp CCCEECSSSSTTCT-----TCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCC-----SG
T ss_pred cCCccCHHHhcCCC-----CCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCC-----CC
Confidence 66655555444332 33466666666665532 33 367888999999999999999998887753311 12
Q ss_pred CCCCcccCcCCCCCccCCCCCCcceeec
Q 002174 410 STLDCRAQSCPTDYEYSPTSPIRCFCAA 437 (956)
Q Consensus 410 ~~~~c~~~~~~~~~~~~p~~~~~~~c~~ 437 (956)
....|..|.--........+.....|..
T Consensus 159 ~~~~C~~P~~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 159 GAARCGAPSKVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp GGCBBCSSTTTTTSBGGGSCTTTCCCCC
T ss_pred CCCCCCCChHHcCCChhhCcHhhcCcCC
Confidence 2455666544344443334455555643
No 376
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.65 E-value=6.1e-19 Score=212.22 Aligned_cols=126 Identities=14% Similarity=0.149 Sum_probs=82.8
Q ss_pred ceeeEEEeCCCCccccCCcCcc-CCCCCCEEEccCC-CCccc-CCccccCCcccchhhccCCCCCCCCCcccC----CCc
Q 002174 82 LHLRELQLLNLNLSGNLSPEIG-RLSYLTILDFMWN-KISGS-IPKEIGNIKSLELLLLNGNELTGSLPEELG----YLP 154 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~ 154 (956)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4688899998888876666665 6888999999888 55532 444455788899999998888765554443 566
Q ss_pred cccceeeccccccCCCCcc----ccccccCCeeecccC-cccCCCccccCCccccceecc
Q 002174 155 KLDRIQIDQNYISGSLPKS----FANLNKTRHFHMNNN-SISGQIPPELSRLPSLVHMLL 209 (956)
Q Consensus 155 ~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~L 209 (956)
+|++|+|++|. ....... +.++++|++|+|++| .+. .++..+..+++|++|++
T Consensus 185 ~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l 242 (594)
T 2p1m_B 185 SLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGT 242 (594)
T ss_dssp CCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEEC
T ss_pred cCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEccc
Confidence 88888888886 2111122 344588888888877 222 24444444444444443
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.65 E-value=2.3e-16 Score=156.48 Aligned_cols=133 Identities=23% Similarity=0.241 Sum_probs=96.6
Q ss_pred CCCCCEEEccCCCCc-ccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCee
Q 002174 105 LSYLTILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (956)
Q Consensus 105 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (956)
.++|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467888888888887 67777778888888888888888755 677778888888888888877677777777888888
Q ss_pred ecccCcccCCC-ccccCCccccceeccccccccCCCC---cccCCcchhhhhcccCCcCC
Q 002174 184 HMNNNSISGQI-PPELSRLPSLVHMLLDNNNLTGYLP---PELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 184 ~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~Ls~N~l~ 239 (956)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888777532 2566777777777777777775444 35566666666666666654
No 378
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=4.3e-16 Score=156.03 Aligned_cols=137 Identities=20% Similarity=0.254 Sum_probs=108.9
Q ss_pred CCCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCC
Q 002174 61 DPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGN 140 (956)
Q Consensus 61 ~~c~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 140 (956)
+.|.|.|+++.|.+. ++. .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|
T Consensus 3 ~~C~C~~~~l~~~~~-----------------~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 62 (177)
T 2o6r_A 3 SRCSCSGTEIRCNSK-----------------GLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQN 62 (177)
T ss_dssp TTCEEETTEEECCSS-----------------CCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSS
T ss_pred CCCEeCCCEEEecCC-----------------CCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCC
Confidence 467778988888643 233 233333 368899999999998766667888999999999999
Q ss_pred CCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCC
Q 002174 141 ELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGY 217 (956)
Q Consensus 141 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 217 (956)
++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+..+++|++|+|++|.+.+.
T Consensus 63 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 63 QIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 99877777788899999999999999877777788888899999998888866666678888888888888888754
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=4.1e-16 Score=154.72 Aligned_cols=131 Identities=21% Similarity=0.308 Sum_probs=63.1
Q ss_pred cccceeecccccc-CCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcc
Q 002174 155 KLDRIQIDQNYIS-GSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQL 233 (956)
Q Consensus 155 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 233 (956)
+|++|+|++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|++|+|
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 3444444444443 33333344444444444444444432 33444444444444444444444444444455555555
Q ss_pred cCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC----CCCCCCCccEEEccCCcCC
Q 002174 234 DNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP----DLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 234 s~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~~~l~~L~~L~Ls~N~l~ 287 (956)
++|.+++...+..+..+++|+.|++++|.+++.++ .+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 55555432122445555555555555555555554 3555556666666666555
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=3.2e-16 Score=173.50 Aligned_cols=141 Identities=15% Similarity=0.131 Sum_probs=98.7
Q ss_pred CCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCCh--------------hhHHHHHHHHHHHHhcCCCceeeeecccc
Q 002174 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------------QGEKEFLTEIQFLSRLHHRNLVSLVGYCD 690 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~ 690 (956)
-|++.+.||+|+||.||+|...+|+.||||+++.... ........++++.....|+|+.+++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3888999999999999999998999999998753210 00112222233322333444433332211
Q ss_pred c------CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC--
Q 002174 691 E------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-- 762 (956)
Q Consensus 691 ~------~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-- 762 (956)
. ....+|||||++|++|.++.. ......++.|++.+|.|||+.+ ||||||||.|||+++++
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~--------~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSS--------VPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCC--------CSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEECS
T ss_pred CCCeeeeccCceEEEEecCCccHhhhcc--------cHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCCc
Confidence 1 123379999999988866432 1234568899999999999999 99999999999998876
Q ss_pred --------cEEEEeeccccccC
Q 002174 763 --------TAKVADFGLSRLAP 776 (956)
Q Consensus 763 --------~~kl~DfGla~~~~ 776 (956)
.+.|+||+-+....
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEETT
T ss_pred ccccccccceEEEEeCCcccCC
Confidence 38999999876543
No 381
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.62 E-value=5e-18 Score=204.23 Aligned_cols=174 Identities=16% Similarity=0.176 Sum_probs=101.4
Q ss_pred cceeeEEEeCCC-Ccccc-CCcCccCCCCCCEEEccCCCCcccCCcccc----CCcccchhhccCCCCCCCCC-cc----
Q 002174 81 YLHLRELQLLNL-NLSGN-LSPEIGRLSYLTILDFMWNKISGSIPKEIG----NIKSLELLLLNGNELTGSLP-EE---- 149 (956)
Q Consensus 81 ~~~l~~L~L~~~-~l~~~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~----~l~~L~~L~Ls~N~l~~~~p-~~---- 149 (956)
..+++.|+|.+| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|+|++|. . .+. ..
T Consensus 129 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~-~~~~~~l~~l 206 (594)
T 2p1m_B 129 FKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-S-EVSFSALERL 206 (594)
T ss_dssp CTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-S-CCCHHHHHHH
T ss_pred CCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-C-cCCHHHHHHH
Confidence 357899999988 55543 334445788999999999988765544443 56789999999887 2 222 22
Q ss_pred cCCCccccceeeccc-cccCCCCccccccccCCeeecccCc--------------------------cc----CCCcccc
Q 002174 150 LGYLPKLDRIQIDQN-YISGSLPKSFANLNKTRHFHMNNNS--------------------------IS----GQIPPEL 198 (956)
Q Consensus 150 ~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~--------------------------l~----~~~p~~l 198 (956)
+..+++|++|+|++| .+.+ ++..+.++++|+.|+++.+. +. ..++..+
T Consensus 207 ~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~ 285 (594)
T 2p1m_B 207 VTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVY 285 (594)
T ss_dssp HHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGH
T ss_pred HHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHH
Confidence 234588888888887 3333 55555566666666544331 11 1122222
Q ss_pred CCccccceeccccccccCCCC-cccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEec
Q 002174 199 SRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 258 (956)
Q Consensus 199 ~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~L 258 (956)
..+++|++|+|++|.+++... ..+..+++|+.|+|++| +....++.....+++|+.|+|
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L 345 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRV 345 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEE
T ss_pred HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEE
Confidence 345667777777776553221 22445666666666665 322112222334555666655
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=3.1e-16 Score=152.19 Aligned_cols=110 Identities=23% Similarity=0.254 Sum_probs=61.3
Q ss_pred CCCCEEEccCCCCc-ccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeee
Q 002174 106 SYLTILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFH 184 (956)
Q Consensus 106 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 184 (956)
++|++|++++|+++ +.+|..+..+++|++|+|++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 45556666666655 45555555566666666666665543 4555556666666666666554555555555566666
Q ss_pred cccCcccCC-CccccCCccccceeccccccccCC
Q 002174 185 MNNNSISGQ-IPPELSRLPSLVHMLLDNNNLTGY 217 (956)
Q Consensus 185 L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~ 217 (956)
|++|++++. .+..+..+++|++|++++|++++.
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 128 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNL 128 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGS
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccch
Confidence 665555532 224455555555555555555543
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=1.6e-15 Score=153.99 Aligned_cols=127 Identities=24% Similarity=0.305 Sum_probs=96.5
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
+.+++++++|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 35778888777 4555443 57888888888887 67777888888888888888888777777888888888888888
Q ss_pred cccCCCCccccccccCCeeecccCcccCCCccccCCccccceecccccccc
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT 215 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 215 (956)
+|++..+..|.++++|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 888777777777778888888888777655556777777777777777766
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=4.8e-15 Score=148.34 Aligned_cols=130 Identities=22% Similarity=0.247 Sum_probs=99.5
Q ss_pred CCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeeccc
Q 002174 108 LTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNN 187 (956)
Q Consensus 108 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 187 (956)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888887 5664443 6888888888888876667778888888888888888866666778888888888888
Q ss_pred CcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 188 NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 188 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
|+|++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 88886666667778888888888888876655556777777777777777765
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=1.2e-15 Score=147.99 Aligned_cols=129 Identities=18% Similarity=0.210 Sum_probs=116.9
Q ss_pred cceeeEEEeCCCCcc-ccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccce
Q 002174 81 YLHLRELQLLNLNLS-GNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (956)
Q Consensus 81 ~~~l~~L~L~~~~l~-~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 159 (956)
..+++.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 357999999999999 88999999999999999999999965 689999999999999999998889988889999999
Q ss_pred eeccccccCC-CCccccccccCCeeecccCcccCCCc---cccCCccccceecccc
Q 002174 160 QIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIP---PELSRLPSLVHMLLDN 211 (956)
Q Consensus 160 ~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~L~~ 211 (956)
+|++|++++. .+..+.++++|++|++++|.+++..+ ..+..+++|++|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999964 34889999999999999999997655 5788899999999874
No 386
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=2e-14 Score=142.71 Aligned_cols=134 Identities=22% Similarity=0.246 Sum_probs=99.4
Q ss_pred ccEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEE
Q 002174 276 LGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 355 (956)
Q Consensus 276 L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L 355 (956)
.+.|++++|.|+ .+|.... .+|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+. +|+.|
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~-~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~-----~L~~L 83 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP-TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLT-----QLTQL 83 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT-----TCCEE
T ss_pred CCEEEeCCCCcC-ccCccCC-CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCC-----CCCEE
Confidence 456677777776 4565443 5778888888888888788888888888888888888866665555544 45588
Q ss_pred EccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCC-cccccCCCCCCCccccc---CCCCCCCccc
Q 002174 356 DFQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNEIDR---STNSTLDCRA 416 (956)
Q Consensus 356 ~Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~-~~~~~~~~~~~~~~~~~---~~~~~~~c~~ 416 (956)
+|++|+|++++.. + .++.+..|+|++|||.|+|. +.+|..|+......+.. .+...+.|..
T Consensus 84 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~l~~l~~~l~~~~~~~~~~~~~~~~~~~C~~ 150 (170)
T 3g39_A 84 SLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRWISQHPGLVFGYLNLDPDSARCSG 150 (170)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBGGGHHHHHHHHHCGGGEECSSSBCGGGSBBCC
T ss_pred ECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCCchhHHHHHHHHHhCcceeeccccCCcccceeCC
Confidence 8888888888775 4 58899999999999999995 88888888766554321 3445566655
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.1e-16 Score=163.60 Aligned_cols=133 Identities=21% Similarity=0.266 Sum_probs=67.3
Q ss_pred CcccchhhccCCCCCCCCCc------ccCCCccccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCcc
Q 002174 129 IKSLELLLLNGNELTGSLPE------ELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLP 202 (956)
Q Consensus 129 l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 202 (956)
...++.++++.|.++|.+|. .+..+++|++|+|++|++++ +| .+.++++|++|+|++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34444555555555544444 45555555555555555553 33 4555555555555555555 3444444445
Q ss_pred ccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccC
Q 002174 203 SLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP 266 (956)
Q Consensus 203 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 266 (956)
+|++|+|++|++++ +| .+..+++|++|+|++|++++......+..+++|++|++++|.+++.
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 55555555555553 22 3455555555555555554311112455555566666665555544
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=7.8e-17 Score=164.64 Aligned_cols=152 Identities=19% Similarity=0.277 Sum_probs=86.9
Q ss_pred CCCCCEEEccCCCCcccCCc------cccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccc
Q 002174 105 LSYLTILDFMWNKISGSIPK------EIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN 178 (956)
Q Consensus 105 l~~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 178 (956)
...++.++++.|.++|.+|. .|.++++|++|+|++|.+++ +| .+..+++|++|+|++|+++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34444455555555544444 55666666666666666654 44 5556666666666666665 4455555556
Q ss_pred cCCeeecccCcccCCCccccCCccccceeccccccccCCCC-cccCCcchhhhhcccCCcCCCCCCch----------hc
Q 002174 179 KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPA----------SY 247 (956)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~----------~~ 247 (956)
+|++|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|++|++++|.+.+ ..|. .+
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~-~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN-DYKENNATSEYRIEVV 170 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH-HHHTTTTHHHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc-ccccccchHHHHHHHH
Confidence 66666666666654 33 45556666666666666664322 345666666666666666654 2222 26
Q ss_pred cCCCCCcEEeccCCCCc
Q 002174 248 SNMSKLLKLSLRNCSLQ 264 (956)
Q Consensus 248 ~~l~~L~~L~Ls~N~l~ 264 (956)
..+++|+.|| +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 6677777776 45443
No 389
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.49 E-value=2.1e-14 Score=159.03 Aligned_cols=100 Identities=12% Similarity=0.223 Sum_probs=56.3
Q ss_pred CCCCCEEEccCCCCc--ccCCccccCCcccchhhccCCCCCCCCCcccCC--------CccccceeeccccccCCCCccc
Q 002174 105 LSYLTILDFMWNKIS--GSIPKEIGNIKSLELLLLNGNELTGSLPEELGY--------LPKLDRIQIDQNYISGSLPKSF 174 (956)
Q Consensus 105 l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~ 174 (956)
+++|+.|||++|++. ...+ +.++.++.+++..|.+. +..|.+ +++|+.|+|.+ +++...+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~---~~~~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKA---GTYPNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESS---SSSGGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCcc---ccccccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 566777777777665 2111 11222334444444222 344445 67777777766 6665555667
Q ss_pred cccccCCeeecccCcccCCCccccCCccccceecccc
Q 002174 175 ANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (956)
Q Consensus 175 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 211 (956)
.++++|+.|+|++|.+....+..|..+.++..+.+..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 7777777777777766655566666666666665554
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.49 E-value=8.6e-15 Score=146.38 Aligned_cols=133 Identities=18% Similarity=0.230 Sum_probs=82.8
Q ss_pred cCccCCCCCCEEEccCCCCcccCCccccCCc-ccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccc
Q 002174 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIK-SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN 178 (956)
Q Consensus 100 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 178 (956)
+.+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|+|++..+..|..++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 34566677777777777777 3443 44444 777777777777754 5667777777777777777754444456677
Q ss_pred cCCeeecccCcccCCCcc--ccCCccccceeccccccccCCCCc----ccCCcchhhhhcccCCcC
Q 002174 179 KTRHFHMNNNSISGQIPP--ELSRLPSLVHMLLDNNNLTGYLPP----ELSELPKLLILQLDNNNF 238 (956)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~Ls~N~l 238 (956)
+|++|+|++|+|+ .+|. .+..+++|+.|++++|.++. +|. .+..+++|+.|++++|.+
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 7777777777775 3444 56666666666666666653 233 244455555555555544
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=6.9e-14 Score=139.38 Aligned_cols=120 Identities=23% Similarity=0.304 Sum_probs=94.0
Q ss_pred cEEEccCCcCCCCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEE
Q 002174 277 GYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 356 (956)
Q Consensus 277 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~ 356 (956)
+.+++++|+++ .+|.... .+|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+. +|+.|+
T Consensus 15 ~~l~~~~n~l~-~iP~~~~-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~-----~L~~L~ 87 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP-TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLT-----QLTQLD 87 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC-TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-----TCCEEE
T ss_pred cEEEeCCCCCC-ccCCCcC-CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcc-----hhhEEE
Confidence 56777777775 6666543 5788888888888888888889999999999999999865555555443 456899
Q ss_pred ccCCCCCCCCCC-C-CCCCCcEEEecCCcccccCC-cccccCCCCCCCcc
Q 002174 357 FQNNNLTNISGS-F-NIPPNVTVRLRGNPFCLNTN-AEQFCGSHSDDDNE 403 (956)
Q Consensus 357 Ls~N~L~~l~~~-~-~~~~l~~l~l~~Np~~c~c~-~~~~~~~~~~~~~~ 403 (956)
|++|+|+.++.. + .++.+..|+|++|||.|+|. +.++..|+......
T Consensus 88 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~~~l~~~~~~~~~~ 137 (174)
T 2r9u_A 88 LNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDIMYLRNWVADHTSI 137 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGGHHHHHHHHHCGGG
T ss_pred CCCCccceeCHHHhccccCCCEEEeCCCCcccccccHHHHHHHHHhcccc
Confidence 999999988876 4 48899999999999999996 77888787655543
No 392
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=3e-14 Score=157.73 Aligned_cols=253 Identities=13% Similarity=0.109 Sum_probs=166.4
Q ss_pred ceeeEEEeCCCCcc--ccCCcCccCCCCCCEEEccCCCCcccCCccccC--------CcccchhhccCCCCCCCCCcccC
Q 002174 82 LHLRELQLLNLNLS--GNLSPEIGRLSYLTILDFMWNKISGSIPKEIGN--------IKSLELLLLNGNELTGSLPEELG 151 (956)
Q Consensus 82 ~~l~~L~L~~~~l~--~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~ 151 (956)
.+++.|+|++|++. ......+ +.+..+.+..|.|. +..|.+ +++|+.|+|.+ .++...+..|.
T Consensus 49 ~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I~---~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~ 121 (329)
T 3sb4_A 49 PSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFVP---AYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFK 121 (329)
T ss_dssp TTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEEC---TTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTT
T ss_pred ccCeEEecCcceeEEecCccccc---cccccccccccccC---HHHhcccccccccccCCCcEEECCc-cccchhHHHhh
Confidence 46899999999988 3332233 23566666666433 455666 99999999999 88877778899
Q ss_pred CCccccceeeccccccCCCCccccccccCCeeecccCcc----cCCCccccCCccccc-eeccccccccCCCCcc----c
Q 002174 152 YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSI----SGQIPPELSRLPSLV-HMLLDNNNLTGYLPPE----L 222 (956)
Q Consensus 152 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l----~~~~p~~l~~l~~L~-~L~L~~N~l~~~~p~~----l 222 (956)
++++|+.|+|++|.+....+.+|.++.++..+.+..+.. .......|.++.+|+ .+.+.... .++.. -
T Consensus 122 ~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~---~l~~~~~~~~ 198 (329)
T 3sb4_A 122 GCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG---KLEDEIMKAG 198 (329)
T ss_dssp TCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC---CHHHHHHHTT
T ss_pred cCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC---cHHHHHhhcc
Confidence 999999999999999877788899988888877766432 222234455555565 33333211 11111 1
Q ss_pred CCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCCCCCCCCCcc--cc
Q 002174 223 SELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSL--NI 299 (956)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L 299 (956)
....++..+.+.++-.. .........+++|+.|+|++|+++.+++. |..+.+|+.|+|.+| ++ .++...+.. +|
T Consensus 199 ~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L 275 (329)
T 3sb4_A 199 LQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRL 275 (329)
T ss_dssp CCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTC
T ss_pred cCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhc
Confidence 12344445555443211 01111112377888888888888876664 788888888888887 65 555554432 68
Q ss_pred C-EEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCC
Q 002174 300 T-TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLN 348 (956)
Q Consensus 300 ~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~ 348 (956)
+ .|+|.+ .++...+.+|.++++|+.|++++|+++...+..|..+.+|+
T Consensus 276 ~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 276 AGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp CEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCC
T ss_pred cEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchh
Confidence 8 888887 67767778888888888888888888866666776655543
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.45 E-value=2.5e-14 Score=143.03 Aligned_cols=110 Identities=26% Similarity=0.301 Sum_probs=58.3
Q ss_pred cccCCcccchhhccCCCCCCCCCcccCCCc-cccceeeccccccCCCCccccccccCCeeecccCcccCCCccccCCccc
Q 002174 125 EIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPS 203 (956)
Q Consensus 125 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 203 (956)
.+.++.+|++|+|++|+++ .+|. +..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 3556666777777777766 3343 33333 666666666666543 44555555555555555555333333355555
Q ss_pred cceeccccccccCCCCc--ccCCcchhhhhcccCCcCC
Q 002174 204 LVHMLLDNNNLTGYLPP--ELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 204 L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~ 239 (956)
|++|+|++|+|+. +|. .+..+++|+.|+|++|.++
T Consensus 90 L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 90 LTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC
Confidence 5555555555542 222 3444444444444444443
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.43 E-value=8.7e-13 Score=149.45 Aligned_cols=262 Identities=10% Similarity=0.140 Sum_probs=199.5
Q ss_pred eeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeecc
Q 002174 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (956)
Q Consensus 84 l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 163 (956)
++.+.+.+ +++..-..+|.+. +|+.+.|..| ++.+-..+|.+. +|+.++|.+ .++...+..|.++++|+.++|++
T Consensus 115 l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~ 189 (401)
T 4fdw_A 115 YNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSK 189 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTT
T ss_pred ccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCC
Confidence 34444443 4554445677774 7999999876 775666778874 799999986 67767778899999999999999
Q ss_pred ccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCC
Q 002174 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (956)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (956)
|+++......|. ..+|+.+.|.++ +...-..+|.++++|+.++|.+| ++.....+|.+ .+|+.+.|. |.++. ..
T Consensus 190 n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~-I~ 263 (401)
T 4fdw_A 190 TKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTN-IA 263 (401)
T ss_dssp SCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCE-EC
T ss_pred CcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccE-EC
Confidence 999866666676 589999999855 77666788999999999999875 66566677877 789999995 45553 34
Q ss_pred chhccCCCCCcEEeccCCCCc-----cCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc--cccCEEEccCCcCCCCcch
Q 002174 244 PASYSNMSKLLKLSLRNCSLQ-----GPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPS 315 (956)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~-----~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~ 315 (956)
...|.++++|+.+++.+|.+. .... .|..+++|+.++|. |.++ .++...+. .+|+.|+|..| ++.....
T Consensus 264 ~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 264 SRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp TTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred hhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 678999999999999998876 2333 48999999999999 4576 56665443 48999999655 7767788
Q ss_pred hcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCC
Q 002174 316 NFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (956)
Q Consensus 316 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~ 364 (956)
+|.++ +|+.|++++|.+....+..|..+. ..++.|++..|.+..
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~----~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGFP----DDITVIRVPAESVEK 384 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCSC----TTCCEEEECGGGHHH
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCCC----CCccEEEeCHHHHHH
Confidence 99999 999999999998865555555442 245678888877654
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=3.2e-13 Score=133.98 Aligned_cols=104 Identities=20% Similarity=0.251 Sum_probs=53.9
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
+.|++++++|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 445666655553 343332 45555555555555544555555555555555555555444444455555555555555
Q ss_pred cccCCCCccccccccCCeeecccCccc
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSIS 191 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (956)
+|++..+..|.++++|++|+|++|.+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 555444444444555555555544444
No 396
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.42 E-value=1e-12 Score=148.86 Aligned_cols=261 Identities=11% Similarity=0.104 Sum_probs=204.4
Q ss_pred CCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCee
Q 002174 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (956)
Q Consensus 104 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (956)
....++.+.+.+ .++.+-..+|.+. +|+.++|.+| ++..-...|.+ .+|+.+.|.. .++...+.+|.++++|+.+
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCee
Confidence 347788888875 5665667778885 7999999877 77566777887 5799999986 6776777899999999999
Q ss_pred ecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEEeccCCCC
Q 002174 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (956)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (956)
+|.+|+++......|. ..+|+.+.|.++ ++.....+|.++++|+.++|..| ++. .-..+|.+ .+|+.+.| .|++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~-I~~~aF~~-~~L~~i~l-p~~i 259 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST-IGQEAFRE-SGITTVKL-PNGV 259 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE-ECTTTTTT-CCCSEEEE-ETTC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccC-cccccccc-CCccEEEe-CCCc
Confidence 9999999965555666 689999999855 77677789999999999999876 442 34457777 89999999 5667
Q ss_pred ccCCC-CCCCCCCccEEEccCCcCC----CCCCCCCCc--cccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCCCc
Q 002174 264 QGPMP-DLSRIPNLGYLDLSSNQLN----GSIPPGRLS--LNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (956)
Q Consensus 264 ~~~~~-~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (956)
+.... .|..+++|+.+++.+|.+. ..++...+. .+|+.++|. |.++.....+|.++++|+.|+|.+| ++..
T Consensus 260 ~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I 337 (401)
T 4fdw_A 260 TNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQI 337 (401)
T ss_dssp CEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEE
T ss_pred cEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEE
Confidence 76655 5999999999999998875 125554443 389999999 5588788899999999999999665 6644
Q ss_pred CChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCC-CCcEEEecCCc
Q 002174 337 IPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIP-PNVTVRLRGNP 383 (956)
Q Consensus 337 ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~~~-~l~~l~l~~Np 383 (956)
-..+|..+ .|+.|++++|.+..++... .++ .+..|++..|.
T Consensus 338 ~~~aF~~~------~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~ 381 (401)
T 4fdw_A 338 NFSAFNNT------GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAES 381 (401)
T ss_dssp CTTSSSSS------CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGG
T ss_pred cHHhCCCC------CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHH
Confidence 55566543 4669999999999887653 354 56788887765
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=3.6e-13 Score=134.12 Aligned_cols=104 Identities=21% Similarity=0.269 Sum_probs=60.6
Q ss_pred eEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccc
Q 002174 85 RELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQN 164 (956)
Q Consensus 85 ~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 164 (956)
+.+++++++|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 35666666664 4454443 56666666666666555666666666666666666666544444555666666666666
Q ss_pred cccCCCCccccccccCCeeecccCccc
Q 002174 165 YISGSLPKSFANLNKTRHFHMNNNSIS 191 (956)
Q Consensus 165 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 191 (956)
+|++..+..|.++++|+.|+|++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 665444444555555555555555554
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=1.7e-12 Score=144.83 Aligned_cols=130 Identities=19% Similarity=0.220 Sum_probs=88.3
Q ss_pred EEccCC-cCCCCCCCCCCc-cccCEEEccC-CcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEE
Q 002174 279 LDLSSN-QLNGSIPPGRLS-LNITTIKLSN-NKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFIL 355 (956)
Q Consensus 279 L~Ls~N-~l~~~~p~~~~~-~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L 355 (956)
++++++ +|+ .+|. +.. .+|+.|+|++ |.|++..+..|.+|++|+.|+|++|+|++..|..|..+.. |+.|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~-----L~~L 85 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPR-----LSRL 85 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSC-----CCEE
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcC-----CCEE
Confidence 455554 454 3444 222 2566666664 6666666677777888888888888887777777665443 4578
Q ss_pred EccCCCCCCCCCCC-CCCCCcEEEecCCcccccCCcccccCCCCCCCcccccCCCCCCCcccCc
Q 002174 356 DFQNNNLTNISGSF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQS 418 (956)
Q Consensus 356 ~Ls~N~L~~l~~~~-~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~ 418 (956)
||++|+|+++|... ....|..|+|.+|+|.|+|++.+|..|.......+ ....+.|.++.
T Consensus 86 ~l~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l---~~~~~~C~~~~ 146 (347)
T 2ifg_A 86 NLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGLGGV---PEQKLQCHGQG 146 (347)
T ss_dssp ECCSSCCSCCCSTTTCSCCCCEEECCSSCCCCCGGGHHHHHHHHTTCSSC---GGGCCCCSSSS
T ss_pred eCCCCccceeCHHHcccCCceEEEeeCCCccCCCccHHHHHHHHhCcccc---cccCCCCCCCh
Confidence 88888888777653 33348999999999999999999998876543332 23567777654
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=2.1e-12 Score=144.05 Aligned_cols=112 Identities=17% Similarity=0.258 Sum_probs=89.8
Q ss_pred CC-CCCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCccCCCCCCEEEccC-CCCcccCCccccCCcccchhhccC
Q 002174 62 PC-TSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMW-NKISGSIPKEIGNIKSLELLLLNG 139 (956)
Q Consensus 62 ~c-~~~w~gv~C~~~~~~~~~~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~ 139 (956)
.| .|.|.+|.|.+. |+|++ +|. |..+++|++|+|++ |+|++..+..|++|++|++|+|++
T Consensus 4 ~c~~C~~~~v~~~~~----------------n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~ 65 (347)
T 2ifg_A 4 ACCPHGSSGLRCTRD----------------GALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVK 65 (347)
T ss_dssp SSCCSSSSCEECCSS----------------CCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCS
T ss_pred cCccccCCEEEcCCC----------------CCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCC
Confidence 46 556777777432 14553 677 99999999999996 999987778899999999999999
Q ss_pred CCCCCCCCcccCCCccccceeeccccccCCCCccccccccCCeeecccCcccC
Q 002174 140 NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG 192 (956)
Q Consensus 140 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 192 (956)
|+|++..|..|.+|++|++|+|++|+|++..+..|..++ |+.|+|.+|.|..
T Consensus 66 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 66 SGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999988888889999999999999999876666666665 8888888888763
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19 E-value=3.6e-11 Score=128.21 Aligned_cols=144 Identities=14% Similarity=0.088 Sum_probs=112.2
Q ss_pred HhcCCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEe
Q 002174 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~E 700 (956)
.-+.|++...++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..++|||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e 90 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMS 90 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEE
Confidence 3456777778888888999999854 6889999987532222346888999999885 6778889999988889999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE--------------------------------------- 741 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------- 741 (956)
|++|.+|.+.+. +......++.+++++|..||+.
T Consensus 91 ~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 91 EADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp CCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred ecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 999999987641 1122346888999999999981
Q ss_pred -----------------CCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 742 -----------------ADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 742 -----------------~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..+.++|+|+++.||+++++..+.|+||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01348999999999999876667799999875
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=1.6e-13 Score=153.90 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=50.9
Q ss_pred CCCCcEEeccCCCCccCC-----CCCCCCCCccEEEccCCcCCCCC----CCCC-CccccCEEEccCCcCCCC----cch
Q 002174 250 MSKLLKLSLRNCSLQGPM-----PDLSRIPNLGYLDLSSNQLNGSI----PPGR-LSLNITTIKLSNNKLTGT----IPS 315 (956)
Q Consensus 250 l~~L~~L~Ls~N~l~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~----p~~~-~~~~L~~L~Ls~N~l~~~----~p~ 315 (956)
.++|+.|+|++|.|+... ..+..+++|++|+|++|.|+... .... ...+|++|+|++|.|+.. +..
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 345555555555554311 11234455666666666654211 1111 112566666666666642 334
Q ss_pred hcCCCCcCCeEecccccCCCcCChhhhhh
Q 002174 316 NFSGLPRLQRLFIANNSLSGSIPSSIWQS 344 (956)
Q Consensus 316 ~~~~l~~L~~L~L~~N~l~~~ip~~~~~l 344 (956)
.+...++|++|+|++|.|++.....+..+
T Consensus 234 ~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 234 AAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp HHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred HHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 45556788888888888876555555443
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.16 E-value=2.5e-13 Score=152.36 Aligned_cols=161 Identities=16% Similarity=0.170 Sum_probs=79.5
Q ss_pred CCCCEEEccCCCCcccCCccccCC-----cccchhhccCCCCCCCCCccc-CCCccccceeeccccccCCCCccc-----
Q 002174 106 SYLTILDFMWNKISGSIPKEIGNI-----KSLELLLLNGNELTGSLPEEL-GYLPKLDRIQIDQNYISGSLPKSF----- 174 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~----- 174 (956)
++|++|+|++|.|+......|..+ ++|++|+|++|.++......+ ..+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456677777777664333333222 566666666666653222222 224456666666665543222222
Q ss_pred cccccCCeeecccCcccCC----CccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCC
Q 002174 175 ANLNKTRHFHMNNNSISGQ----IPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNM 250 (956)
Q Consensus 175 ~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l 250 (956)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|+|++.... .+...+...
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~---------------------~L~~~L~~~ 210 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE---------------------LLAAQLDRN 210 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH---------------------HHHHHGGGC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH---------------------HHHHHHhcC
Confidence 1234455555555555421 222233444455555555544421100 123344555
Q ss_pred CCCcEEeccCCCCccCCC-----CCCCCCCccEEEccCCcCC
Q 002174 251 SKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 251 ~~L~~L~Ls~N~l~~~~~-----~~~~l~~L~~L~Ls~N~l~ 287 (956)
++|+.|+|++|.|+.... .+...++|++|+|++|.|+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELS 252 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCC
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCC
Confidence 666666666666654211 1334566777777777775
No 403
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.01 E-value=6.9e-09 Score=117.55 Aligned_cols=281 Identities=14% Similarity=0.033 Sum_probs=153.2
Q ss_pred eeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeec
Q 002174 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (956)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (956)
.++++.|.+ +++..-..+|.++++|+.++|.++ ++.+-...|.++++|+.+.+..+ +.......|.+...++.....
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~~~ 148 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITIPE 148 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEECCT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecccccccccCc
Confidence 456666643 344444456666666777766543 44334455666666666655443 221222333333222211111
Q ss_pred cccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCC---
Q 002174 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFE--- 239 (956)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~--- 239 (956)
.. ......+|.++++|+.+.+.++... .....|.++.+|+.+.+..| ++.....+|.++..|+.+.+..+...
T Consensus 149 ~~--~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~ 224 (394)
T 4fs7_A 149 GV--TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGD 224 (394)
T ss_dssp TC--CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECT
T ss_pred cc--cccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeeh
Confidence 11 1122345666666776666554322 33455666666666666655 33344445556666665555443221
Q ss_pred ---------CC--------CCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCC--ccccC
Q 002174 240 ---------GT--------TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRL--SLNIT 300 (956)
Q Consensus 240 ---------~~--------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~ 300 (956)
.. .....|.++.+|+.+.+..+..+-....|..+..|+.+.+..+.+ +...+ ..+|+
T Consensus 225 ~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i----~~~~F~~~~~L~ 300 (394)
T 4fs7_A 225 FALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV----PEKTFYGCSSLT 300 (394)
T ss_dssp TTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE----CTTTTTTCTTCC
T ss_pred hhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee----cccccccccccc
Confidence 00 112244555666666665554433333466666666666655432 33222 23788
Q ss_pred EEEccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEE
Q 002174 301 TIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVR 378 (956)
Q Consensus 301 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~ 378 (956)
.+.+.++ ++.....+|.++.+|+.++|.++ ++..-..+|..+.+ |+.+++..| ++.+... | ...+|+.+.
T Consensus 301 ~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~-----L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ 372 (394)
T 4fs7_A 301 EVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTS-----LSNINFPLS-LRKIGANAFQGCINLKKVE 372 (394)
T ss_dssp EEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTT-----CCEECCCTT-CCEECTTTBTTCTTCCEEE
T ss_pred ccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCC-----CCEEEECcc-ccEehHHHhhCCCCCCEEE
Confidence 8888765 66566778889999999998754 65444456655444 457888766 7777654 3 467788887
Q ss_pred ecCC
Q 002174 379 LRGN 382 (956)
Q Consensus 379 l~~N 382 (956)
+..|
T Consensus 373 lp~~ 376 (394)
T 4fs7_A 373 LPKR 376 (394)
T ss_dssp EEGG
T ss_pred ECCC
Confidence 7554
No 404
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.00 E-value=3.6e-10 Score=120.05 Aligned_cols=129 Identities=21% Similarity=0.151 Sum_probs=97.2
Q ss_pred eeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc--eeeeecccccCCcEEEEEecCCCCCHHHH
Q 002174 633 GQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQ 710 (956)
Q Consensus 633 G~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~~~~~LV~E~~~~gsL~~~ 710 (956)
+.|..+.||++...+|+.+++|...... ...+.+|+++++.+.+.+ +.+++++...++..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 3555689999987778889999976542 235778999999886544 456888888778899999999998884
Q ss_pred HhhcCCCCchhHHHHHHHHHHHHHHHHhhhcC------------------------------------------------
Q 002174 711 LSAKSKEPLGFAMRLSIALGSSRGILYLHTEA------------------------------------------------ 742 (956)
Q Consensus 711 l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------------------ 742 (956)
... . ....++.++++.|..||+..
T Consensus 104 ~~~-----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 104 SSH-----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp TSC-----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred cCc-----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 211 1 12356777888888888643
Q ss_pred -------CCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 743 -------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 743 -------~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12299999999999998876677999998753
No 405
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.89 E-value=3e-09 Score=118.87 Aligned_cols=141 Identities=22% Similarity=0.316 Sum_probs=105.0
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEec--CCC-hhhHHHHHHHHHHHHhcC--CCceeeeecccccC---CcEEEEEe
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQ--EGS-LQGEKEFLTEIQFLSRLH--HRNLVSLVGYCDEE---GEQMLVYE 700 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~nIv~l~~~~~~~---~~~~LV~E 700 (956)
.+.|+.|.++.||+....+ ..+++|+.. ... ......+.+|+++++.+. +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4568999999999998754 578888765 322 123457788999999997 45578888888765 45899999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------- 742 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 742 (956)
|++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 122 FVSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred ecCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 99987774421 123667788889999999999999731
Q ss_pred -----------------CCCEeccCCCcccEEEcCCCc--EEEEeeccccc
Q 002174 743 -----------------DPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 774 (956)
Q Consensus 743 -----------------~~~ivH~Dlk~~NILl~~~~~--~kl~DfGla~~ 774 (956)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999997753 68999999864
No 406
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.84 E-value=3.5e-08 Score=111.75 Aligned_cols=177 Identities=10% Similarity=-0.055 Sum_probs=124.0
Q ss_pred cCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeeccccccCCCCccccc
Q 002174 97 NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFAN 176 (956)
Q Consensus 97 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 176 (956)
.-..+|.++++|+.+.|.. .++.+-..+|.++++|+.++|.++ ++..-...|.++.+|+.+.+..+ +......+|.+
T Consensus 62 Ig~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~ 138 (394)
T 4fs7_A 62 IGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKG 138 (394)
T ss_dssp ECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTT
T ss_pred hHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeec
Confidence 3456899999999999975 477566778999999999999866 56466778999999999888765 44355667777
Q ss_pred cccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCcEE
Q 002174 177 LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKL 256 (956)
Q Consensus 177 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 256 (956)
+..+.......... .-..+|.++.+|+.+.+.++. .......|.++.+|+.+.+..| ++. .....|.++..|+.+
T Consensus 139 ~~~~~~~~~~~~~~--i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~-I~~~~F~~~~~L~~i 213 (394)
T 4fs7_A 139 CDFKEITIPEGVTV--IGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKI-IRDYCFAECILLENM 213 (394)
T ss_dssp CCCSEEECCTTCCE--ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCE-ECTTTTTTCTTCCBC
T ss_pred ccccccccCccccc--cchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceE-eCchhhcccccccee
Confidence 76554444333322 335678999999999998664 3356678999999999999877 432 334578888888888
Q ss_pred eccCCCCccCCCCCCCCCCccEEEcc
Q 002174 257 SLRNCSLQGPMPDLSRIPNLGYLDLS 282 (956)
Q Consensus 257 ~Ls~N~l~~~~~~~~~l~~L~~L~Ls 282 (956)
.+..+.... ........+|+.+.+.
T Consensus 214 ~~~~~~~~i-~~~~~~~~~l~~i~ip 238 (394)
T 4fs7_A 214 EFPNSLYYL-GDFALSKTGVKNIIIP 238 (394)
T ss_dssp CCCTTCCEE-CTTTTTTCCCCEEEEC
T ss_pred ecCCCceEe-ehhhcccCCCceEEEC
Confidence 776654321 1122233455555554
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.77 E-value=7e-09 Score=113.02 Aligned_cols=192 Identities=16% Similarity=0.151 Sum_probs=120.5
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCc--eeeeecccccCC---cEEEEEecC
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRN--LVSLVGYCDEEG---EQMLVYEFM 702 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--Iv~l~~~~~~~~---~~~LV~E~~ 702 (956)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 4568999999999853 45888886532 34567889999998883 332 334554443332 358999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 002174 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE----------------------------------------- 741 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 741 (956)
+|.++.+.... .++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 99 KGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 99888654321 255666777888888888888851
Q ss_pred --------------CCCCEeccCCCcccEEEcC--CCcEEEEeeccccccCCCC-CCCc------cccceecccccCCCc
Q 002174 742 --------------ADPPVFHRDIKASNILLDH--KFTAKVADFGLSRLAPVPD-IEGI------VPAHVSTVVKGTPGY 798 (956)
Q Consensus 742 --------------~~~~ivH~Dlk~~NILl~~--~~~~kl~DfGla~~~~~~~-~~~~------~~~~~~~~~~gt~~y 798 (956)
..+.++|+|+++.||++++ ...+.|+||+.+..-.... .... .............++
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~ 254 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKH 254 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTC
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCC
Confidence 1245899999999999998 5568899999986532110 0000 000000000001111
Q ss_pred cc-ccccccCCCCCcccEeehHHHHHHHHhCCCCC
Q 002174 799 LD-PEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 832 (956)
Q Consensus 799 ~a-PE~~~~~~~~~~sDVwSlG~ll~elltg~~pf 832 (956)
.. |+..... ....+.|++|.++|++.+|..+|
T Consensus 255 ~~~~~~~~r~--~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 255 KDIPTVLEKY--RMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp SCHHHHHHHH--HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCcHHHHHHH--HHHHHHHHHHHHHHHHHcCCHHH
Confidence 22 2222111 12258899999999999998776
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.74 E-value=1.2e-09 Score=121.44 Aligned_cols=183 Identities=12% Similarity=0.200 Sum_probs=90.1
Q ss_pred ceeeEEEeCCCCccc-c-------CCcCccCCCCCCEEEccCCCCc---------ccCCccccCCcccchhhccCCCCCC
Q 002174 82 LHLRELQLLNLNLSG-N-------LSPEIGRLSYLTILDFMWNKIS---------GSIPKEIGNIKSLELLLLNGNELTG 144 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~-~-------~~~~l~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (956)
.+++.|.+......| . +..++.++++|+.|.+..+... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 467788877665542 1 1334567788888888665331 123333455566666666665211
Q ss_pred CCCcccCCCccccceeeccccccCCCCcccc--ccccCCeeeccc--CcccCCCccccCCccccceeccccccccCCCCc
Q 002174 145 SLPEELGYLPKLDRIQIDQNYISGSLPKSFA--NLNKTRHFHMNN--NSISGQIPPELSRLPSLVHMLLDNNNLTGYLPP 220 (956)
Q Consensus 145 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 220 (956)
.++. + .+++|++|+|..|.+.......+. .+++|+.|+|+. |...+... +. .+..
T Consensus 186 ~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~------------------~~-~l~~ 244 (362)
T 2ra8_A 186 SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD------------------MN-VFRP 244 (362)
T ss_dssp BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC------------------GG-GTGG
T ss_pred eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh------------------HH-HHHH
Confidence 1222 2 255666666665555422222222 455566555532 11111000 00 0001
Q ss_pred cc--CCcchhhhhcccCCcCCCCCCchhc---cCCCCCcEEeccCCCCccC-----CCCCCCCCCccEEEccCCcCC
Q 002174 221 EL--SELPKLLILQLDNNNFEGTTIPASY---SNMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 221 ~l--~~l~~L~~L~Ls~N~l~~~~~p~~~---~~l~~L~~L~Ls~N~l~~~-----~~~~~~l~~L~~L~Ls~N~l~ 287 (956)
.+ ..+++|+.|+|++|.+.+ ..+..+ ..+++|+.|+|+.|.+... ...+..+++|+.|+|++|.|+
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~-~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQN-VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHH-HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred HHhcCCCCCcCEEeCCCCCCch-HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 11 124555555655555542 111112 2356677777777766552 112345667777777777765
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=1.5e-09 Score=120.70 Aligned_cols=134 Identities=18% Similarity=0.220 Sum_probs=65.9
Q ss_pred CCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhcc--CCCCCcEEeccC--CCCccC------CC
Q 002174 199 SRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS--NMSKLLKLSLRN--CSLQGP------MP 268 (956)
Q Consensus 199 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~------~~ 268 (956)
..+|+|+.|+|++|.-. .++. +. +++|+.|+|..|.+.. .....+. .+++|+.|+|+. |...+. .+
T Consensus 169 ~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~-~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~ 244 (362)
T 2ra8_A 169 DAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPD-SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRP 244 (362)
T ss_dssp HTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCH-HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGG
T ss_pred hcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCCh-HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHH
Confidence 34455555555544211 1111 22 4556666665555532 1112222 466666666642 111111 11
Q ss_pred CC--CCCCCccEEEccCCcCCCCCCCC----CCccccCEEEccCCcCCCCc----chhcCCCCcCCeEecccccCCCc
Q 002174 269 DL--SRIPNLGYLDLSSNQLNGSIPPG----RLSLNITTIKLSNNKLTGTI----PSNFSGLPRLQRLFIANNSLSGS 336 (956)
Q Consensus 269 ~~--~~l~~L~~L~Ls~N~l~~~~p~~----~~~~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~ 336 (956)
.+ ..+++|++|+|++|.+....+.. ....+|++|+|+.|.|++.. +..+..+++|+.|+|++|.++..
T Consensus 245 ~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 245 LFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDE 322 (362)
T ss_dssp GSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHH
T ss_pred HHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHH
Confidence 11 24567777777777765322211 12236777777777766532 22334457777777777776643
No 410
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.68 E-value=3.9e-07 Score=103.04 Aligned_cols=282 Identities=13% Similarity=0.126 Sum_probs=144.5
Q ss_pred eeEEEeCCCCccccCCcCccCCCCCCEEEccCCC---CcccCCccccCCcccchhhccCCCCCCCCCcccCCCcccccee
Q 002174 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK---ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 84 l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
++++.+.. +++..-..+|.+.++|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++......|..+.+|+.+.
T Consensus 66 L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 45555543 2443444566667777777766543 44333455666666666666544 3334445566666777776
Q ss_pred eccccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCC
Q 002174 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
+..+. .......|.++.+|+.+.+.++ +...-..+|. ..+|+.+.+..+-.. ....+|..+.+|+......+....
T Consensus 144 lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~ 219 (394)
T 4gt6_A 144 IPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPAKVTR-IGTNAFSECFALSTITSDSESYPA 219 (394)
T ss_dssp CCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECTTCCE-ECTTTTTTCTTCCEEEECCSSSCB
T ss_pred cccee-eeecccceecccccccccccce-eeEecccccc-ccceeEEEECCcccc-cccchhhhccccceeccccccccc
Confidence 65432 2244455666666766666544 3322233333 245666665543322 333445555555554443332211
Q ss_pred CCCchhc--------------cCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc--cccCEEE
Q 002174 241 TTIPASY--------------SNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIK 303 (956)
Q Consensus 241 ~~~p~~~--------------~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~ 303 (956)
....+ .....+..+.+. +.++.... .|..+..|+.+.+..+..+ +....+. .+|+.+.
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~--I~~~aF~~c~~L~~i~ 294 (394)
T 4gt6_A 220 --IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS--IGTGAFMNCPALQDIE 294 (394)
T ss_dssp --SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE--ECTTTTTTCTTCCEEE
T ss_pred --ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce--ecCccccccccccccc
Confidence 00000 011112222221 11221111 3666677777777655432 3333222 3677777
Q ss_pred ccCCcCCCCcchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecC
Q 002174 304 LSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRG 381 (956)
Q Consensus 304 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~ 381 (956)
+. +.++......|.++.+|+.++|.++ ++..-..+|..+.+ |+.+.|..+ ++.+... | ...+|..+.+.+
T Consensus 295 l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~-----L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 295 FS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQ-----LERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT-----CCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred CC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCC-----CCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 75 4455455667777777777777654 44333445544433 346777543 6666544 3 367777888877
Q ss_pred Ccc
Q 002174 382 NPF 384 (956)
Q Consensus 382 Np~ 384 (956)
|.-
T Consensus 367 ~~~ 369 (394)
T 4gt6_A 367 SRS 369 (394)
T ss_dssp CHH
T ss_pred cee
Confidence 753
No 411
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.63 E-value=1.1e-08 Score=95.78 Aligned_cols=88 Identities=19% Similarity=0.263 Sum_probs=59.7
Q ss_pred eEecccccCC-CcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCcccccCCcccccCCCCCCC
Q 002174 325 RLFIANNSLS-GSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDD 401 (956)
Q Consensus 325 ~L~L~~N~l~-~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~~--~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~ 401 (956)
.++.+++.|+ ..+|..+ ..+|+.|+|++|+|+.++... .++.+..|+|++|||.|||++.+|..|+....
T Consensus 12 ~v~Cs~~~L~~~~vP~~l-------p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~~ 84 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF-------PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRP 84 (130)
T ss_dssp EEECCSSCCCTTTSCSCC-------CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTSS
T ss_pred EEEeCCCCCccccCCCCC-------CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhCc
Confidence 4555555554 2444332 123567788888888877664 47888999999999999999999999987654
Q ss_pred cccccCCCCCCCcccCcCCCC
Q 002174 402 NEIDRSTNSTLDCRAQSCPTD 422 (956)
Q Consensus 402 ~~~~~~~~~~~~c~~~~~~~~ 422 (956)
.... ...+.|..|.-...
T Consensus 85 ~~~~---~~~~~C~~P~~l~g 102 (130)
T 3rfe_A 85 ERAP---YRDLRCVAPPALRG 102 (130)
T ss_dssp CSGG---GTTCBCCBSTTTTT
T ss_pred cccc---ccCcEeCcChHHcC
Confidence 3322 34577877544333
No 412
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.59 E-value=8.6e-07 Score=100.20 Aligned_cols=267 Identities=11% Similarity=0.105 Sum_probs=181.8
Q ss_pred CcCccCCC-CCCEEEccCCCCcccCCccccCCcccchhhccCCC---CCCCCCcccCCCccccceeeccccccCCCCccc
Q 002174 99 SPEIGRLS-YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE---LTGSLPEELGYLPKLDRIQIDQNYISGSLPKSF 174 (956)
Q Consensus 99 ~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 174 (956)
..+|.+.. .|+.+.|-.+ ++.+-..+|.++++|+.+.++.|. ++..-...|.++.+|+.+.+..+ ++......|
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF 133 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAF 133 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTT
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhh
Confidence 45677774 5999999754 776667889999999999998875 55455678888999999888765 444556778
Q ss_pred cccccCCeeecccCcccCCCccccCCccccceeccccccccCCCCcccCCcchhhhhcccCCcCCCCCCchhccCCCCCc
Q 002174 175 ANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLL 254 (956)
Q Consensus 175 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~ 254 (956)
.++.+|+.+.+..+ +.......|..+.+|+.+.+.++ ++.....+|.. .+|+.+.+..+-.. .....|.++.+|+
T Consensus 134 ~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~--i~~~af~~c~~l~ 208 (394)
T 4gt6_A 134 HHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR--IGTNAFSECFALS 208 (394)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE--ECTTTTTTCTTCC
T ss_pred hhhcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc--cccchhhhccccc
Confidence 99999999999754 33355667888999999998765 44344556654 56888888765443 3446788888888
Q ss_pred EEeccCCCCccCCCC--------------CCCCCCccEEEccCCcCCCCCCCCCC--ccccCEEEccCCcCCCCcchhcC
Q 002174 255 KLSLRNCSLQGPMPD--------------LSRIPNLGYLDLSSNQLNGSIPPGRL--SLNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 255 ~L~Ls~N~l~~~~~~--------------~~~l~~L~~L~Ls~N~l~~~~p~~~~--~~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
......+........ +.....+..+.+..+ ++ .+....+ ..+|+.+.+.++..+ .....|.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~-v~-~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~ 285 (394)
T 4gt6_A 209 TITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNG-VA-RIETHAFDSCAYLASVKMPDSVVS-IGTGAFM 285 (394)
T ss_dssp EEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTT-EE-EECTTTTTTCSSCCEEECCTTCCE-ECTTTTT
T ss_pred eecccccccccccceeecccccccccccccccccccceEEcCCc-ce-EcccceeeecccccEEecccccce-ecCcccc
Confidence 887776655433221 112223334433222 22 2222222 237999999876544 6678899
Q ss_pred CCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCC
Q 002174 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGN 382 (956)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~ip~~~~~l~~l~~~~L~~L~Ls~N~L~~l~~~-~-~~~~l~~l~l~~N 382 (956)
++++|+.+.+. +.++......|....+ |+.++|..| ++.+... | ....|+.+.|..+
T Consensus 286 ~c~~L~~i~l~-~~i~~I~~~aF~~c~~-----L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 286 NCPALQDIEFS-SRITELPESVFAGCIS-----LKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp TCTTCCEEECC-TTCCEECTTTTTTCTT-----CCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred cccccccccCC-CcccccCceeecCCCC-----cCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 99999999996 4566344445555444 558999764 8887665 4 4678888888655
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=2.6e-10 Score=120.29 Aligned_cols=40 Identities=10% Similarity=0.287 Sum_probs=19.9
Q ss_pred CCccccceeeccccccC--CCCccccccccCCeeecccCccc
Q 002174 152 YLPKLDRIQIDQNYISG--SLPKSFANLNKTRHFHMNNNSIS 191 (956)
Q Consensus 152 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~ 191 (956)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 34555555555555554 22344444555555555555554
No 414
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.45 E-value=6.7e-07 Score=96.15 Aligned_cols=75 Identities=20% Similarity=0.239 Sum_probs=60.0
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCC---ceeeeecccccCCcEEEEEecCCCC
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~LV~E~~~~g 705 (956)
.+.|+.|.++.||++...+|+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 4679999999999999888999999997543332345789999999999865 467777663 368999999998
Q ss_pred CH
Q 002174 706 TL 707 (956)
Q Consensus 706 sL 707 (956)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43 E-value=7.8e-07 Score=97.43 Aligned_cols=136 Identities=15% Similarity=0.188 Sum_probs=98.2
Q ss_pred CCCCCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC----CceeeeecccccCCcEEEEEe
Q 002174 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~~~~~~~~LV~E 700 (956)
.....+.++.|....||+. ++.+++|+... ......+.+|.++++.+.+ -.+.+++++ +..++|||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 4555678999999999997 56788887643 2224568899999988865 223445544 56789999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcC--------------------------------------
Q 002174 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA-------------------------------------- 742 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------- 742 (956)
|++|.++.+... ..++..++..++.++++.++.||+..
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988864321 12445556667777777777777432
Q ss_pred ----------------------CCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 743 ----------------------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 743 ----------------------~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 22369999999999999976679999999864
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.27 E-value=5.4e-06 Score=90.03 Aligned_cols=136 Identities=21% Similarity=0.204 Sum_probs=91.6
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCC---ceeeeecccc-cCCcEEEEEecCCC
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCD-EEGEQMLVYEFMSN 704 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~-~~~~~~LV~E~~~~ 704 (956)
.+.++.|....||+. +..+++|+.. .......+.+|+++++.+.+. .+.+++.+.. ..+..++||||++|
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 346788888899987 4668888753 233446788999999999752 3456666653 45678899999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-------------------------------------------
Q 002174 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE------------------------------------------- 741 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 741 (956)
.++.+..-. .++...+..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 887653211 123333444444444444444432
Q ss_pred --------------CCCCEeccCCCcccEEEcC---CCc-EEEEeeccccc
Q 002174 742 --------------ADPPVFHRDIKASNILLDH---KFT-AKVADFGLSRL 774 (956)
Q Consensus 742 --------------~~~~ivH~Dlk~~NILl~~---~~~-~kl~DfGla~~ 774 (956)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2335799999999999987 455 58999998764
No 417
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.26 E-value=5e-08 Score=102.82 Aligned_cols=121 Identities=25% Similarity=0.266 Sum_probs=68.2
Q ss_pred hhhccCCCCCCCCCc-ccCCCccccc--eeecccccc---CCCCccccccccCCeeecccCcccC--CCccccCCccccc
Q 002174 134 LLLLNGNELTGSLPE-ELGYLPKLDR--IQIDQNYIS---GSLPKSFANLNKTRHFHMNNNSISG--QIPPELSRLPSLV 205 (956)
Q Consensus 134 ~L~Ls~N~l~~~~p~-~~~~l~~L~~--L~Ls~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~~l~~L~ 205 (956)
.|....|..++.++- .|...+.|+. ++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+
T Consensus 120 ~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~ 199 (267)
T 3rw6_A 120 IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLK 199 (267)
T ss_dssp HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCC
T ss_pred HHHhccchhccccCHHHcCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCC
Confidence 344444444433332 2455555655 666666433 1222223567788888888888886 4456666777888
Q ss_pred eeccccccccCCCCcccCCcc--hhhhhcccCCcCCCCCCc-------hhccCCCCCcEEe
Q 002174 206 HMLLDNNNLTGYLPPELSELP--KLLILQLDNNNFEGTTIP-------ASYSNMSKLLKLS 257 (956)
Q Consensus 206 ~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l~~~~~p-------~~~~~l~~L~~L~ 257 (956)
.|+|++|+|++. ..+..+. +|++|+|++|.+.+ .+| ..+..+++|+.||
T Consensus 200 ~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~-~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 200 ILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD-TFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp EEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG-GCSSHHHHHHHHHHHCTTCCEES
T ss_pred EEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc-ccCcchhHHHHHHHHCcccCeEC
Confidence 888888887754 2233333 56666666666654 222 1244555555554
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=5e-08 Score=97.76 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=68.4
Q ss_pred CCcCccCCCCCCEEEccCC-CCcc----cCCccccCCcccchhhccCCCCCCC----CCcccCCCccccceeeccccccC
Q 002174 98 LSPEIGRLSYLTILDFMWN-KISG----SIPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYISG 168 (956)
Q Consensus 98 ~~~~l~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 168 (956)
+...+...+.|++|+|++| .+.. .+...+...++|++|+|++|.|+.. +...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3345666777888888887 7763 2334455567777777777777632 12233344566777777776653
Q ss_pred C----CCccccccccCCeeec--ccCcccCC----CccccCCccccceecccccccc
Q 002174 169 S----LPKSFANLNKTRHFHM--NNNSISGQ----IPPELSRLPSLVHMLLDNNNLT 215 (956)
Q Consensus 169 ~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 215 (956)
. +...+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 2 2344555556666666 56666532 2223334456666666666554
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.18 E-value=7e-06 Score=87.33 Aligned_cols=135 Identities=16% Similarity=0.147 Sum_probs=98.3
Q ss_pred eeeeeCCe-eEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEecCCCCCH
Q 002174 631 QIGQGGYG-KVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 631 ~lG~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~E~~~~gsL 707 (956)
.+..|..| .||+.... ++..+++|+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45566666 68987754 5677899986532 3457888999998884 33466788888888899999999999888
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcC---------------------------------------------
Q 002174 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--------------------------------------------- 742 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------- 742 (956)
.+..... ......++.++++.|.-||+..
T Consensus 108 ~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (272)
T 4gkh_A 108 FQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWK 181 (272)
T ss_dssp HHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHH
T ss_pred cccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHH
Confidence 7765331 1223456666777777777421
Q ss_pred ----------CCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 743 ----------DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 743 ----------~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.+.++|+|+.+.||++++++.+-|+||+.+..
T Consensus 182 ~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 182 EMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11378999999999999887778999998753
No 420
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.16 E-value=3.9e-05 Score=85.98 Aligned_cols=248 Identities=10% Similarity=0.035 Sum_probs=118.9
Q ss_pred eeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceeec
Q 002174 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (956)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (956)
+++++.+.. +++..-..+|.++.+|+.++|..+ ++.+-..+|.++ +|+.+.+..+ ++......|.. .+|+.+.+.
T Consensus 47 ~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp 121 (379)
T 4h09_A 47 RISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFP 121 (379)
T ss_dssp GCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECC
T ss_pred CCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCC
Confidence 466666653 455555567888888888888644 664555667766 5777666544 44233344444 478888776
Q ss_pred cccccCCCCccccccccCCeeecccCcccCCCccccCCccccceeccccccccC------------CCCcccCCcchhhh
Q 002174 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTG------------YLPPELSELPKLLI 230 (956)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~------------~~p~~l~~l~~L~~ 230 (956)
.+-.. .....|.+. +|+.+.+-.+ ++..-...|....+++.+.+..+.... .....+....++..
T Consensus 122 ~~~~~-i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 122 GATTE-IGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp TTCCE-ECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred Ccccc-ccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 54322 333344443 4555544432 222334455566666665554433210 01111222222222
Q ss_pred hcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCCCCCCCCCc--cccCEEEccCCc
Q 002174 231 LQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNK 308 (956)
Q Consensus 231 L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~ 308 (956)
+.+..+.-. .....+....+|+.+.+..+--.-....+..+..|+.+.+..+ ++ .+....+. .+|+.+.+..+
T Consensus 199 ~~~~~~~~~--i~~~~f~~~~~l~~i~~~~~~~~i~~~~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 199 FTIPSTVKT--VTAYGFSYGKNLKKITITSGVTTLGDGAFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EECCTTCCE--ECTTTTTTCSSCSEEECCTTCCEECTTTTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-
T ss_pred cccccceeE--EeecccccccccceeeeccceeEEccccccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-
Confidence 222221111 1223344455555555543321111223555555555555544 32 23332221 24555555433
Q ss_pred CCCCcchhcCCCCcCCeEecccccCCCcCChhhhh
Q 002174 309 LTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (956)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ip~~~~~ 343 (956)
++......|.++++|+.+.+.++.++..-..+|..
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcC
Confidence 33344455556666666666555555333344433
No 421
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.06 E-value=2.5e-07 Score=92.60 Aligned_cols=110 Identities=15% Similarity=0.216 Sum_probs=88.0
Q ss_pred ceeeEEEeCCC-Ccccc----CCcCccCCCCCCEEEccCCCCcc----cCCccccCCcccchhhccCCCCCCC----CCc
Q 002174 82 LHLRELQLLNL-NLSGN----LSPEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTGS----LPE 148 (956)
Q Consensus 82 ~~l~~L~L~~~-~l~~~----~~~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 148 (956)
..++.|+|++| .+... +...+...++|++|+|++|.|.. .+...+...++|++|+|++|.|+.. +..
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~ 115 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVE 115 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHH
Confidence 46899999999 88753 45667788999999999999975 2344566668999999999999843 355
Q ss_pred ccCCCccccceee--ccccccCC----CCccccccccCCeeecccCccc
Q 002174 149 ELGYLPKLDRIQI--DQNYISGS----LPKSFANLNKTRHFHMNNNSIS 191 (956)
Q Consensus 149 ~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 191 (956)
.+...++|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 116 ~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 116 ALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp GGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 6777889999999 88998743 3345566689999999999986
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.05 E-value=8.7e-05 Score=83.06 Aligned_cols=236 Identities=11% Similarity=0.056 Sum_probs=115.4
Q ss_pred ceeeEEEeCCCCccccCCcCccCCCCCCEEEccCCCCcccCCccccCCcccchhhccCCCCCCCCCcccCCCccccceee
Q 002174 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++++.|.+ +++..-..+|.+. +|+.+.+..+ ++..-..+|.. .+|+.+++.++- +......|.+ .+|+.+.+
T Consensus 69 ~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~lp~~~-~~i~~~~F~~-~~l~~~~~ 142 (379)
T 4h09_A 69 YNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEFPGAT-TEIGNYIFYN-SSVKRIVI 142 (379)
T ss_dssp TTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEECCTTC-CEECTTTTTT-CCCCEEEE
T ss_pred CCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccCCCcc-cccccccccc-ceeeeeec
Confidence 4688888864 4665555677776 6888877644 55344445555 478888887653 3233334443 35665555
Q ss_pred ccccccCCCCccccccccCCeeecccCcccC------------CCccccCCccccceeccccccccCCCCcccCCcchhh
Q 002174 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISG------------QIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL 229 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~------------~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 229 (956)
..+ ++......|.++.+|+.+.+..+.... .....+.....+..+.+..+.-. .....+....+|+
T Consensus 143 ~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~ 220 (379)
T 4h09_A 143 PKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLK 220 (379)
T ss_dssp CTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCS
T ss_pred cce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeecccccccccc
Confidence 443 333445566667777766655443221 11112222333333333222111 2223344444555
Q ss_pred hhcccCCcCCCCCCchhccCCCCCcEEeccCCCCccCCC-CCCCCCCccEEEccCCcCCCCCCCCCCc--cccCEEEccC
Q 002174 230 ILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP-DLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSN 306 (956)
Q Consensus 230 ~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~ 306 (956)
.+.+..+--. .....|.++.+|+.+.+..+ ++.... .|..+.+|+.+.+..+ +. .++...+. .+|+.+.+.+
T Consensus 221 ~i~~~~~~~~--i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~ 295 (379)
T 4h09_A 221 KITITSGVTT--LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDN 295 (379)
T ss_dssp EEECCTTCCE--ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECC
T ss_pred eeeeccceeE--EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccc
Confidence 5544433111 12234455555555555443 333222 2455555555555433 22 23332222 2555555555
Q ss_pred CcCCCCcchhcCCCCcCCeEeccc
Q 002174 307 NKLTGTIPSNFSGLPRLQRLFIAN 330 (956)
Q Consensus 307 N~l~~~~p~~~~~l~~L~~L~L~~ 330 (956)
+.++.....+|.++.+|+.+.|.+
T Consensus 296 ~~i~~I~~~aF~~c~~L~~i~lp~ 319 (379)
T 4h09_A 296 SAIETLEPRVFMDCVKLSSVTLPT 319 (379)
T ss_dssp TTCCEECTTTTTTCTTCCEEECCT
T ss_pred cccceehhhhhcCCCCCCEEEcCc
Confidence 555544455555555555555543
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.05 E-value=1.4e-05 Score=88.96 Aligned_cols=140 Identities=13% Similarity=0.139 Sum_probs=88.2
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc--eeeeecccccC-CcEEEEEecCCCC
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGYCDEE-GEQMLVYEFMSNG 705 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~-~~~~LV~E~~~~g 705 (956)
.+.++.|....+|+... +++.+++|..... ..+..|+.+++.+.... +.++++++... +..++||||++|.
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~ 119 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGV 119 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCC
Confidence 45689999999999876 5788999987542 25788999999886433 45666666543 6789999999876
Q ss_pred CHHHH------------------HhhcCCC---C---c---------hhHHH---------------------HHHHHHH
Q 002174 706 TLRDQ------------------LSAKSKE---P---L---------GFAMR---------------------LSIALGS 731 (956)
Q Consensus 706 sL~~~------------------l~~~~~~---~---l---------~~~~~---------------------~~i~~~i 731 (956)
++.+. ||..... . + .|... ......+
T Consensus 120 ~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 199 (362)
T 3ovc_A 120 TLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQAL 199 (362)
T ss_dssp ETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHH
Confidence 55311 1211100 0 0 00000 0111111
Q ss_pred HHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 732 SRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 732 a~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
...+.++... ..+.++|+|+.+.||++++++.+.|+||+.+..
T Consensus 200 ~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 200 DELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 2222233211 124589999999999998877888999998864
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.02 E-value=4.2e-06 Score=93.10 Aligned_cols=79 Identities=4% Similarity=-0.005 Sum_probs=54.1
Q ss_pred Cee-eeeCCeeEEEEEeC-------CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCC---CceeeeecccccC---
Q 002174 630 TQI-GQGGYGKVYKGILP-------DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHH---RNLVSLVGYCDEE--- 692 (956)
Q Consensus 630 ~~l-G~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h---~nIv~l~~~~~~~--- 692 (956)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+.. -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 78888899988754 26778899865432 1112356788888888742 2466777777554
Q ss_pred CcEEEEEecCCCCCHH
Q 002174 693 GEQMLVYEFMSNGTLR 708 (956)
Q Consensus 693 ~~~~LV~E~~~~gsL~ 708 (956)
+..++||||++|.++.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 4578999999886653
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.76 E-value=5.3e-05 Score=83.36 Aligned_cols=140 Identities=18% Similarity=0.159 Sum_probs=79.6
Q ss_pred CeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC--Cceeeeecc------cccCCcEEEEEec
Q 002174 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGY------CDEEGEQMLVYEF 701 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~------~~~~~~~~LV~E~ 701 (956)
+.|+.|..+.||+....+| .+++|+.... ...+..|+++++.+.. -.+.+++.. ....+..++||||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677889999987655 4889988752 2234455555555531 123344431 1245678999999
Q ss_pred CCCCCHH--------------HHHhhc--CC--C--------CchhHH-------------------------------H
Q 002174 702 MSNGTLR--------------DQLSAK--SK--E--------PLGFAM-------------------------------R 724 (956)
Q Consensus 702 ~~~gsL~--------------~~l~~~--~~--~--------~l~~~~-------------------------------~ 724 (956)
++|.++. ..+|.. .. . .-.|.. .
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 112211 00 0 011111 0
Q ss_pred HHHHHHHHHHHHHhhh----------cCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 725 LSIALGSSRGILYLHT----------EADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 725 ~~i~~~ia~gL~yLH~----------~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
..+...+.+++.+|++ .....++|+|+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 0111223445666763 1234599999999999998888999999998753
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.74 E-value=7.5e-05 Score=84.20 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=48.8
Q ss_pred CCeeeeeCCeeEEEEEeC-CCcEEEEEEecCCCh-------hhHHHHHHHHHHHHhcCC--C-ceeeeecccccCCcEEE
Q 002174 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-------QGEKEFLTEIQFLSRLHH--R-NLVSLVGYCDEEGEQML 697 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-nIv~l~~~~~~~~~~~L 697 (956)
.+.||.|.++.||++... +++.|+||....... .....+..|.++++.+.. + .+.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 356899999999999754 468899997653211 112356778888887742 3 34455544 3345689
Q ss_pred EEecCCCC
Q 002174 698 VYEFMSNG 705 (956)
Q Consensus 698 V~E~~~~g 705 (956)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999763
No 427
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.64 E-value=0.00011 Score=78.82 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=55.7
Q ss_pred CCCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCC---ceeeeecccccCCcEEEEEecCCC
Q 002174 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHR---NLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---nIv~l~~~~~~~~~~~LV~E~~~~ 704 (956)
..+.+|.|..+.||+....||+.|+||+...........|..|++.|+.+.-. -+.+++++. ..++||||+++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 35678999999999999999999999987654443345678899998888421 234455442 34789999987
Q ss_pred CCH
Q 002174 705 GTL 707 (956)
Q Consensus 705 gsL 707 (956)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 653
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.56 E-value=0.00021 Score=77.28 Aligned_cols=137 Identities=16% Similarity=0.141 Sum_probs=90.7
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC---CCceeeeecccccCCcEEEEEecCCCC
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~LV~E~~~~g 705 (956)
.+.|+.|....+|+... ++..+++|+.... ....+..|++.|+.+. ...+.+++++....+..++||||+++.
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 45689999999999886 4667888987642 2457888999888874 356778888887778899999999987
Q ss_pred CHH--------H---HHhhcCC-CC-------------------chhHHHH---HHH----------------HHHH-HH
Q 002174 706 TLR--------D---QLSAKSK-EP-------------------LGFAMRL---SIA----------------LGSS-RG 734 (956)
Q Consensus 706 sL~--------~---~l~~~~~-~~-------------------l~~~~~~---~i~----------------~~ia-~g 734 (956)
.+. . .||.... .. -+|.... ++. ..+. ..
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 642 1 2333221 10 1233221 011 0111 11
Q ss_pred HHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002174 735 ILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 735 L~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223432 2356799999999999999887 8899974
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.40 E-value=2.5e-05 Score=76.29 Aligned_cols=34 Identities=6% Similarity=0.066 Sum_probs=17.8
Q ss_pred eeeEEEeCCCCccccCCcCccCCCCCCEEEccCC
Q 002174 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWN 116 (956)
Q Consensus 83 ~l~~L~L~~~~l~~~~~~~l~~l~~L~~L~L~~N 116 (956)
+++.|+|+++.++..--..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555554433334455555555555555
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.31 E-value=0.00076 Score=76.50 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=44.7
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCC------C---hhhHHHHHHHHHHHH-hcCCCceeeeecccccCCcEEEE
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG------S---LQGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~------~---~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.+.||.|..+.||++.. +++.++||..... . ......+..|+..+. ......+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 45689999999999965 5678999943210 1 012223444443322 22334566666665 4667999
Q ss_pred EecC-CC
Q 002174 699 YEFM-SN 704 (956)
Q Consensus 699 ~E~~-~~ 704 (956)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.27 E-value=3.6e-05 Score=75.12 Aligned_cols=38 Identities=11% Similarity=0.003 Sum_probs=23.0
Q ss_pred CCCCEEEccCCCCcccCCccccCCcccchhhccCCC-CC
Q 002174 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNE-LT 143 (956)
Q Consensus 106 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~ 143 (956)
.+|++|||+++.++..--..+..+++|++|+|++|. ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~It 99 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIE 99 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCC
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccC
Confidence 457777777777664433445566666666666664 44
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.09 E-value=0.0017 Score=71.11 Aligned_cols=140 Identities=15% Similarity=0.131 Sum_probs=72.3
Q ss_pred CeeeeeCCee-EEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC--CceeeeecccccCCcEEEEEecCCCCC
Q 002174 630 TQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 630 ~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~LV~E~~~~gs 706 (956)
+.|+.|+... +|+....+++.+++|....... ..+..|+++++.+.. -.+.+++.+....+ ++|||++.+.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465555444 6677654467777886543221 233456666666632 23455666544333 78999997767
Q ss_pred HHHHHhhc---------------------CC---CCchhHHHH-------H-H------------HHHHHHHHHHhh---
Q 002174 707 LRDQLSAK---------------------SK---EPLGFAMRL-------S-I------------ALGSSRGILYLH--- 739 (956)
Q Consensus 707 L~~~l~~~---------------------~~---~~l~~~~~~-------~-i------------~~~ia~gL~yLH--- 739 (956)
+.+++... .. ..++..... . + ...+.+.++.+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 75544221 00 011111000 0 0 001111222221
Q ss_pred hcCCCCEeccCCCcccEEEcCC----CcEEEEeeccccc
Q 002174 740 TEADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 774 (956)
Q Consensus 740 ~~~~~~ivH~Dlk~~NILl~~~----~~~kl~DfGla~~ 774 (956)
......++|||+.+.||+++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123459999999999999875 6899999998864
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.98 E-value=0.0037 Score=67.82 Aligned_cols=157 Identities=12% Similarity=0.118 Sum_probs=87.0
Q ss_pred ccHHHHHHHhcCCCCC-----CeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc--eeeee
Q 002174 614 FTYGEMALATNNFNSS-----TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLV 686 (956)
Q Consensus 614 ~~~~~~~~~~~~~~~~-----~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~ 686 (956)
++.+++...-.+|.+. +.|+.|....+|+....+| .+++|...... ....+..|+++++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 4445555555566552 3456688889999987666 57789876521 1224556777777764222 23333
Q ss_pred ccc------ccCCcEEEEEecCCCCCHHH--------------HHhhc----CCC------CchhHHHHH----------
Q 002174 687 GYC------DEEGEQMLVYEFMSNGTLRD--------------QLSAK----SKE------PLGFAMRLS---------- 726 (956)
Q Consensus 687 ~~~------~~~~~~~LV~E~~~~gsL~~--------------~l~~~----~~~------~l~~~~~~~---------- 726 (956)
... ...+..++||+|++|..+.. .+|.. ... ...|.....
T Consensus 84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 163 (322)
T 2ppq_A 84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE 163 (322)
T ss_dssp CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence 221 12356789999998765311 12221 000 012222110
Q ss_pred --HHHHHHHHHHHhhhc----CCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002174 727 --IALGSSRGILYLHTE----ADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 727 --i~~~ia~gL~yLH~~----~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
+...+.+.++++++. ....++|+|+.+.||+++++..+.|+||+.+.
T Consensus 164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011133445555532 12348999999999999987666899999875
No 434
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.78 E-value=0.014 Score=63.36 Aligned_cols=141 Identities=17% Similarity=0.182 Sum_probs=80.6
Q ss_pred CeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc--eeeeecc-----cccCCcEEEEEecC
Q 002174 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN--LVSLVGY-----CDEEGEQMLVYEFM 702 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~-----~~~~~~~~LV~E~~ 702 (956)
..++ |....||+....+|+.+++|....... ....+..|..+++.+.... +.+++.. ....+..++||||+
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 3466 788899998877787899999864321 2346677888887774222 3444443 11245668899999
Q ss_pred CCCCHH-----H------H---Hhhc----C---CCCchhHHH----HHH---------------HHHHHHHHHHhhhc-
Q 002174 703 SNGTLR-----D------Q---LSAK----S---KEPLGFAMR----LSI---------------ALGSSRGILYLHTE- 741 (956)
Q Consensus 703 ~~gsL~-----~------~---l~~~----~---~~~l~~~~~----~~i---------------~~~ia~gL~yLH~~- 741 (956)
+|.++. . . +|.. . ....++... ..+ ...+.+.++.+.+.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 875431 1 1 1210 0 011111110 000 00111122222211
Q ss_pred ---CCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 742 ---ADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 742 ---~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
....++|+|+++.||+++ + .+.|+||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234488999999999999 4 899999998754
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.72 E-value=0.0021 Score=69.19 Aligned_cols=71 Identities=8% Similarity=0.066 Sum_probs=43.8
Q ss_pred CCeeeeeCCeeEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCce-eeeecccccCCcEEEEEecC-CCCC
Q 002174 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFM-SNGT 706 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~LV~E~~-~~gs 706 (956)
.+.|+.|....+|+. +.+++|+........ ....+|+.+++.+....+ .++++++. +.-++|+||+ ++.+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~~--~~~~~v~e~i~~g~~ 94 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVDP--ATGVMVTRYIAGAQT 94 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEECT--TTCCEEEECCTTCEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEEC--CCCEEEEeecCCCcc
Confidence 567899999999998 458888876432111 122457777776642222 45555543 3346899999 6544
Q ss_pred H
Q 002174 707 L 707 (956)
Q Consensus 707 L 707 (956)
+
T Consensus 95 l 95 (301)
T 3dxq_A 95 M 95 (301)
T ss_dssp C
T ss_pred C
Confidence 4
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.67 E-value=0.00037 Score=69.31 Aligned_cols=62 Identities=13% Similarity=0.150 Sum_probs=30.1
Q ss_pred CCCCCCccEEEccCCcCCCCCCCCCC-----ccccCEEEccCCcCCCC----cchhcCCCCcCCeEecccc
Q 002174 270 LSRIPNLGYLDLSSNQLNGSIPPGRL-----SLNITTIKLSNNKLTGT----IPSNFSGLPRLQRLFIANN 331 (956)
Q Consensus 270 ~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N 331 (956)
+..-..|+.|+|++|+|....-.... ...|++|+|++|.|... +-..+..-+.|+.|+|++|
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 34445566666666655422111111 12456666666665542 2234444555666666654
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.66 E-value=0.00015 Score=72.10 Aligned_cols=114 Identities=17% Similarity=0.201 Sum_probs=58.1
Q ss_pred CccCCCCCCEEEccCC-CCcc----cCCccccCCcccchhhccCCCCCCC----CCcccCCCccccceeeccccccCC--
Q 002174 101 EIGRLSYLTILDFMWN-KISG----SIPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYISGS-- 169 (956)
Q Consensus 101 ~l~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~-- 169 (956)
.+.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|+|... +-..+..-+.|++|+|++|.|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3445566777777764 6542 2334455556777777777776622 122233345566666666666522
Q ss_pred --CCccccccccCCeeecccC---cccC----CCccccCCccccceeccccccc
Q 002174 170 --LPKSFANLNKTRHFHMNNN---SISG----QIPPELSRLPSLVHMLLDNNNL 214 (956)
Q Consensus 170 --~p~~~~~l~~L~~L~L~~N---~l~~----~~p~~l~~l~~L~~L~L~~N~l 214 (956)
+-.++..-+.|++|+|++| .+.. .+...+..-++|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 1223333445666666543 2221 1222333445555666555543
No 438
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.65 E-value=0.004 Score=70.59 Aligned_cols=72 Identities=18% Similarity=0.225 Sum_probs=49.3
Q ss_pred CeeeeeCCeeEEEEEeCC--------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCce-eeeecccccCCcEEEEEe
Q 002174 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~LV~E 700 (956)
+.|+.|....+|+....+ ++.+++|+..... ....+.+|..+++.+...++ .++++.+.+ .+|||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 467888889999998653 5789999885421 11355679988888853333 566766543 38999
Q ss_pred cCCCCCH
Q 002174 701 FMSNGTL 707 (956)
Q Consensus 701 ~~~~gsL 707 (956)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.51 E-value=0.0067 Score=67.25 Aligned_cols=140 Identities=20% Similarity=0.212 Sum_probs=81.7
Q ss_pred CeeeeeCCeeEEEEEeC--------CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEe
Q 002174 630 TQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~E 700 (956)
+.+..|-...+|+.... +++.+++|+.... ........+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888899998864 2478999986432 223446678999888874 2223566766654 29999
Q ss_pred cCCCCCHHH--------------H---Hhhc----CCCCc-hhHHHHHHHHHHHH-------------------HHHHhh
Q 002174 701 FMSNGTLRD--------------Q---LSAK----SKEPL-GFAMRLSIALGSSR-------------------GILYLH 739 (956)
Q Consensus 701 ~~~~gsL~~--------------~---l~~~----~~~~l-~~~~~~~i~~~ia~-------------------gL~yLH 739 (956)
|++|.+|.. . +|.. .+.+. -+.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 998765421 1 1211 11111 23444444433321 122322
Q ss_pred ----hc-CCCCEeccCCCcccEEEcCC----CcEEEEeeccccc
Q 002174 740 ----TE-ADPPVFHRDIKASNILLDHK----FTAKVADFGLSRL 774 (956)
Q Consensus 740 ----~~-~~~~ivH~Dlk~~NILl~~~----~~~kl~DfGla~~ 774 (956)
.. ....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 21 22348899999999999876 7899999998863
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.45 E-value=0.004 Score=57.71 Aligned_cols=56 Identities=25% Similarity=0.447 Sum_probs=41.8
Q ss_pred EEEccCCcCC-CCCCCCCCccccCEEEccCCcCCCCcchhcCCCCcCCeEecccccCC
Q 002174 278 YLDLSSNQLN-GSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (956)
Q Consensus 278 ~L~Ls~N~l~-~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (956)
.++.+++.|+ ..+|.. ...+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~-lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA-FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSC-CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCC-CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 245543 2336888888888888777888889999999999999875
No 441
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.31 E-value=0.009 Score=68.09 Aligned_cols=74 Identities=14% Similarity=-0.011 Sum_probs=47.5
Q ss_pred CCeeeeeCCeeEEEEEeCC-CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCce-eeeecccccCCcEEEEEecCCCCC
Q 002174 629 STQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNL-VSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nI-v~l~~~~~~~~~~~LV~E~~~~gs 706 (956)
.+.|+.|-...+|+....+ +..+++|+........ -+-.+|..+++.+...++ .++++++.. .+||||++|.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 3568888889999998765 5788899875422111 112478888888865444 467776632 25999998754
Q ss_pred H
Q 002174 707 L 707 (956)
Q Consensus 707 L 707 (956)
|
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 4
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.96 E-value=0.0083 Score=66.54 Aligned_cols=73 Identities=14% Similarity=0.105 Sum_probs=42.9
Q ss_pred CeeeeeCCeeEEEEEeCC---------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc-eeeeecccccCCcEEEEE
Q 002174 630 TQIGQGGYGKVYKGILPD---------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~LV~ 699 (956)
..++.|....+|+....+ ++.+++|+....... ..+...|.++++.+...+ +.++++... -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEecC----CcEEE
Confidence 457778888999988654 268888987643211 112356788777774333 335655442 26899
Q ss_pred ecCCCCCH
Q 002174 700 EFMSNGTL 707 (956)
Q Consensus 700 E~~~~gsL 707 (956)
||++|.++
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.92 E-value=0.044 Score=59.88 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=27.5
Q ss_pred CCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002174 744 PPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 744 ~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
..++|+|+.+.||++++++.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4599999999999999888899999988764
No 444
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=95.47 E-value=0.0022 Score=70.28 Aligned_cols=63 Identities=14% Similarity=0.250 Sum_probs=43.3
Q ss_pred HhcccCCCCCCCHHHHHHHHHHhHhhCC----CCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCC
Q 002174 876 KCCQDETDARPSMSEVMRELESIWNMMP----ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 876 ~c~~~~p~~RPs~~~v~~~L~~~~~~~~----~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
.+....|....+..+++..+..- .++ ...+.+.+||.+||+.||++|||++|+|+||||....
T Consensus 218 mltG~~PF~~~~~~~~~~~i~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~ 284 (350)
T 4b9d_A 218 LCTLKHAFEAGSMKNLVLKIISG--SFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRI 284 (350)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTTG
T ss_pred HHHCCCCCCCcCHHHHHHHHHcC--CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcCC
Confidence 34455566556666665544321 122 1233456899999999999999999999999997643
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.26 E-value=0.052 Score=60.35 Aligned_cols=141 Identities=19% Similarity=0.168 Sum_probs=81.1
Q ss_pred CeeeeeCCeeEEEEEeCC--------CcEEEEEEecCCChh------------hH------HHHHHHHHHHHhcC-CCce
Q 002174 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQ------------GE------KEFLTEIQFLSRLH-HRNL 682 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~------------~~------~~~~~E~~~l~~l~-h~nI 682 (956)
+.|..|-...+|+....+ ++.|.+++....... .+ .....|.++++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778899988653 367888886542210 01 12335888888875 3334
Q ss_pred eeeecccccCCcEEEEEecCCCCCHHH--------------H---Hhhc----CCCCc-hhHHHHHHHHHHH--------
Q 002174 683 VSLVGYCDEEGEQMLVYEFMSNGTLRD--------------Q---LSAK----SKEPL-GFAMRLSIALGSS-------- 732 (956)
Q Consensus 683 v~l~~~~~~~~~~~LV~E~~~~gsL~~--------------~---l~~~----~~~~l-~~~~~~~i~~~ia-------- 732 (956)
.++++++..+ +|+||+++.+|.. . +|.. ...+. -+....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 5677776532 8999998755421 1 1111 11111 2223333332221
Q ss_pred --------------HHH----HHhhhcC-CCCEeccCCCcccEEEcCC------CcEEEEeeccccc
Q 002174 733 --------------RGI----LYLHTEA-DPPVFHRDIKASNILLDHK------FTAKVADFGLSRL 774 (956)
Q Consensus 733 --------------~gL----~yLH~~~-~~~ivH~Dlk~~NILl~~~------~~~kl~DfGla~~ 774 (956)
+-+ .+|...+ ...++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 2232222 2347899999999999887 7899999998753
No 446
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=95.21 E-value=0.0033 Score=66.57 Aligned_cols=63 Identities=13% Similarity=0.258 Sum_probs=44.5
Q ss_pred ccCCCCCCCHHHHHHHHHHhHhhCCCC-CCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 879 QDETDARPSMSEVMRELESIWNMMPES-DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 879 ~~~p~~RPs~~~v~~~L~~~~~~~~~~-~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
...|....+..+..+.+......++.. .....+++.+||..||++|||++|+++||||+....
T Consensus 203 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 203 GKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266 (279)
T ss_dssp SSCTTCCSSHHHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred CCCCCCCCcHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence 444555556666666655543333332 233468999999999999999999999999976554
No 447
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=94.32 E-value=0.0083 Score=63.60 Aligned_cols=35 Identities=11% Similarity=0.257 Sum_probs=30.4
Q ss_pred CCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 907 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 907 ~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
....+++.+||..||++|||++|+++||||.....
T Consensus 237 ~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 237 DGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR 271 (284)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred HHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence 33467999999999999999999999999986554
No 448
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=94.20 E-value=0.0072 Score=63.71 Aligned_cols=63 Identities=6% Similarity=0.108 Sum_probs=43.0
Q ss_pred ccCCCCCCCHHHHHHHHHHhHhhCCCC-CCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 879 QDETDARPSMSEVMRELESIWNMMPES-DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 879 ~~~p~~RPs~~~v~~~L~~~~~~~~~~-~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
...|.......++.+.+..-....+.. .....+++.+||..||++|||++|+++||||..+..
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~~ 270 (276)
T 2h6d_A 207 GTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLP 270 (276)
T ss_dssp SSCSSCCSSHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTCC
T ss_pred CCCCCCCCcHHHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCch
Confidence 444555555555555544322222322 334467999999999999999999999999987654
No 449
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=93.63 E-value=0.17 Score=50.42 Aligned_cols=99 Identities=15% Similarity=0.173 Sum_probs=64.4
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002174 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
-||.+.|... ..++++.++|.++.|.+.+|.-+-....+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~--~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQP--RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCC--CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccC--CceecCCcceEEecCCceeccc-cccc-----------
Confidence 4899999765 45799999999999999987766221111 1233457899999999988764 1111
Q ss_pred ccceecccccCCCcccccccccCCCCCcccEeehHHHHHHHHh
Q 002174 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 827 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwSlG~ll~ellt 827 (956)
.....+.|||... ...+.+.=|||+|+++|.-+-
T Consensus 98 --------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 98 --------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp -----------------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred --------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence 0122466888763 344567789999999999885
No 450
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=93.49 E-value=0.038 Score=38.37 Aligned_cols=25 Identities=24% Similarity=0.569 Sum_probs=18.6
Q ss_pred CCCCccceeehhHHHHHHHHHHHHH
Q 002174 555 SGISKAALAGIILGAIAGAVTISAI 579 (956)
Q Consensus 555 ~~~~~~~~~~ii~g~~~~~~~~~~~ 579 (956)
++.+.++++||++|++++++++.++
T Consensus 6 ~~ls~GaIAGiVvG~v~gv~li~~l 30 (38)
T 2k1k_A 6 RGLTGGEIVAVIFGLLLGAALLLGI 30 (38)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCceeeeehHHHHHHHHHHHH
Confidence 4567788899999988877666554
No 451
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.43 E-value=0.17 Score=56.85 Aligned_cols=73 Identities=12% Similarity=0.074 Sum_probs=46.3
Q ss_pred CeeeeeCCeeEEEEEeCC--------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCc-eeeeecccccCCcEEEEEe
Q 002174 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~~~~LV~E 700 (956)
+.+..|-...+|+....+ ++.+++|+...... ..-+..+|.++++.+.-.+ ..++++.+. -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 456777788999988753 57899998654321 1112346888877774222 345555432 278999
Q ss_pred cCCCCCH
Q 002174 701 FMSNGTL 707 (956)
Q Consensus 701 ~~~~gsL 707 (956)
|++|.+|
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9988653
No 452
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=93.05 E-value=0.011 Score=64.54 Aligned_cols=35 Identities=11% Similarity=0.215 Sum_probs=30.5
Q ss_pred CCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 907 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 907 ~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+...+++.+||..||++|||++|+|+||||++-..
T Consensus 305 ~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 305 PLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp HHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred HHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 34567999999999999999999999999976543
No 453
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=92.97 E-value=0.025 Score=60.47 Aligned_cols=63 Identities=5% Similarity=0.026 Sum_probs=42.0
Q ss_pred ccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 879 QDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 879 ~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
...|.......++.+.+......++. ......+++.+||..||++|||++|+++||||.....
T Consensus 209 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 209 GLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp SSCSCCCSSHHHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred CCCCCCCchHHHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 34454444555555544432222221 2333468999999999999999999999999976654
No 454
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=92.59 E-value=0.022 Score=60.10 Aligned_cols=33 Identities=12% Similarity=0.252 Sum_probs=29.1
Q ss_pred CCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 906 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 906 ~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
.....+++.+||..||++|||++|+++||||..
T Consensus 239 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~ 271 (283)
T 3bhy_A 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA 271 (283)
T ss_dssp CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence 334568999999999999999999999999965
No 455
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=92.33 E-value=0.0088 Score=64.04 Aligned_cols=32 Identities=9% Similarity=0.268 Sum_probs=26.4
Q ss_pred cccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 910 PEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 910 ~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
.+++.+||..||++|||++|+++||||.....
T Consensus 234 ~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~ 265 (299)
T 3m2w_A 234 KMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK 265 (299)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGG
T ss_pred HHHHHHHcccChhhCCCHHHHhcChhhccccc
Confidence 36777888888999999999999999976654
No 456
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=91.96 E-value=0.026 Score=60.01 Aligned_cols=31 Identities=10% Similarity=0.223 Sum_probs=28.2
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
..+++.+||..||++|||++|+++||||...
T Consensus 260 ~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 260 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 3579999999999999999999999999754
No 457
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=91.93 E-value=0.013 Score=62.27 Aligned_cols=31 Identities=13% Similarity=0.394 Sum_probs=26.3
Q ss_pred cccccccCCCCCCCCCCCcCCCCCCcccCCC
Q 002174 910 PEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 910 ~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
.+++.+||..||++|||++|+++||||+...
T Consensus 244 ~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~ 274 (290)
T 3fme_A 244 VDFTSQCLKKNSKERPTYPELMQHPFFTLHE 274 (290)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred HHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence 3677888999999999999999999996543
No 458
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=91.79 E-value=0.014 Score=63.17 Aligned_cols=28 Identities=4% Similarity=0.238 Sum_probs=23.2
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+++.+||..||++|||++|+|+||||++
T Consensus 304 ~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 304 MMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp HHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred HHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 5677778888888888999999999875
No 459
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=91.42 E-value=0.027 Score=59.68 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=28.6
Q ss_pred CCcccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 908 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 908 ~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
...+++.+||..||++|||++|+|+||||...
T Consensus 252 ~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 252 DAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 34679999999999999999999999999643
No 460
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=91.16 E-value=0.017 Score=61.67 Aligned_cols=33 Identities=24% Similarity=0.481 Sum_probs=29.8
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.....++..+.+++.+||+.+|.+||++.++++
T Consensus 255 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 255 EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 346788999999999999999999999999875
No 461
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=91.12 E-value=0.076 Score=56.89 Aligned_cols=33 Identities=21% Similarity=0.451 Sum_probs=29.7
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
..+++.+||..||++|||++|+++||||.+...
T Consensus 255 l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 255 FTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 457999999999999999999999999987654
No 462
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=90.89 E-value=0.01 Score=64.84 Aligned_cols=32 Identities=9% Similarity=0.297 Sum_probs=25.2
Q ss_pred cccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 910 PEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 910 ~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
.+++.+||..||++|||++|+|+||||.....
T Consensus 265 ~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 296 (336)
T 3fhr_A 265 KQLIRLLLKTDPTERLTITQFMNHPWINQSMV 296 (336)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGG
T ss_pred HHHHHHHCCCChhHCcCHHHHhcCcccccccc
Confidence 35777788888888888888888999876543
No 463
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=90.59 E-value=0.037 Score=58.74 Aligned_cols=31 Identities=10% Similarity=0.224 Sum_probs=22.3
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+++.+||..||++|||++|+|+||||.....
T Consensus 257 ~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 257 AFILKCFEPDPDKRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred HHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence 4666777788888888888888999876543
No 464
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=90.25 E-value=0.031 Score=60.95 Aligned_cols=29 Identities=10% Similarity=0.273 Sum_probs=18.3
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
+++.+||..||++|||++|+++||||...
T Consensus 253 ~li~~~L~~dP~~Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 253 SLVSGLLQPVPERRTTLEKLVTDPWVTQP 281 (335)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHCTTTTCC
T ss_pred HHHHHHccCChhhCcCHHHHhcCccccCC
Confidence 45555666666666666666777776553
No 465
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=90.14 E-value=0.031 Score=61.12 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=28.8
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
..+++.+||..||++|||++|+|+||||+...
T Consensus 250 l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 281 (343)
T 3dbq_A 250 LQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 281 (343)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence 46799999999999999999999999997543
No 466
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.13 E-value=0.38 Score=34.45 Aligned_cols=12 Identities=25% Similarity=0.313 Sum_probs=4.8
Q ss_pred ceeehhHHHHHH
Q 002174 561 ALAGIILGAIAG 572 (956)
Q Consensus 561 ~~~~ii~g~~~~ 572 (956)
++++.++|.+++
T Consensus 12 ~IA~gVVgGv~~ 23 (44)
T 2ks1_B 12 SIATGMVGALLL 23 (44)
T ss_dssp SSTHHHHHHHHH
T ss_pred eEEeehhHHHHH
Confidence 344444443333
No 467
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=89.51 E-value=0.04 Score=59.54 Aligned_cols=31 Identities=13% Similarity=0.256 Sum_probs=24.0
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+++.+||..||++|||++|+++||||.+...
T Consensus 272 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~ 302 (320)
T 3a99_A 272 HLIRWCLALRPSDRPTFEEIQNHPWMQDVLL 302 (320)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHTSGGGSSCCC
T ss_pred HHHHHHccCChhhCcCHHHHhcCHhhcCccC
Confidence 4666677778888888888889999976654
No 468
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=89.37 E-value=0.029 Score=61.14 Aligned_cols=31 Identities=16% Similarity=0.437 Sum_probs=24.4
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+++.+||..||++|||++|+++||||.....
T Consensus 289 ~li~~~l~~dp~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 289 DFTSQCLKKNSKERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp HHHHHHTCSSGGGSCCHHHHTTSHHHHHHTT
T ss_pred HHHHHHccCCcccCcCHHHHhcCcCcccccc
Confidence 5667778888888888889999999965444
No 469
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.31 E-value=1 Score=50.10 Aligned_cols=29 Identities=34% Similarity=0.458 Sum_probs=24.9
Q ss_pred EeccCCCcccEEE------cCCCcEEEEeeccccc
Q 002174 746 VFHRDIKASNILL------DHKFTAKVADFGLSRL 774 (956)
Q Consensus 746 ivH~Dlk~~NILl------~~~~~~kl~DfGla~~ 774 (956)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567899999998864
No 470
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=89.31 E-value=0.071 Score=56.84 Aligned_cols=35 Identities=17% Similarity=0.400 Sum_probs=30.4
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCCCCCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGS 943 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~~ 943 (956)
..+++.+||..||++|||++|+++||||.......
T Consensus 247 l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~ 281 (303)
T 3a7i_A 247 LKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT 281 (303)
T ss_dssp HHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCG
T ss_pred HHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCcc
Confidence 46799999999999999999999999997665543
No 471
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=89.31 E-value=0.036 Score=59.56 Aligned_cols=31 Identities=19% Similarity=0.329 Sum_probs=20.6
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+++.+||..||++|||++|+++||||.....
T Consensus 271 ~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 271 DVLKCCLKRDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSHHHHCC--
T ss_pred HHHHHHccCCcccCcCHHHHhcCccccCCCC
Confidence 4555667777777777777778888765544
No 472
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=89.11 E-value=0.088 Score=55.26 Aligned_cols=63 Identities=16% Similarity=0.119 Sum_probs=41.6
Q ss_pred ccCCCCCCCHHHHHHHHHHhHh-hCC-CCCCCCcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 879 QDETDARPSMSEVMRELESIWN-MMP-ESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 879 ~~~p~~RPs~~~v~~~L~~~~~-~~~-~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
...|..-.+..++.+.+..... .++ .......+++.+||..||++|||++|+++|||+.....
T Consensus 212 g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 212 LMPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp SSCSSCCSSHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred CCCCCcccCHHHHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 3445444455555555443211 111 12233467999999999999999999999999977544
No 473
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.89 E-value=0.34 Score=34.61 Aligned_cols=7 Identities=43% Similarity=0.629 Sum_probs=2.7
Q ss_pred hhHHHHH
Q 002174 565 IILGAIA 571 (956)
Q Consensus 565 ii~g~~~ 571 (956)
|+.|++.
T Consensus 12 IA~gVVg 18 (44)
T 2l2t_A 12 IAAGVIG 18 (44)
T ss_dssp HHHHHHH
T ss_pred EEEeehH
Confidence 3334433
No 474
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=88.77 E-value=0.052 Score=58.19 Aligned_cols=31 Identities=19% Similarity=0.358 Sum_probs=20.9
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+++.+||..||++|||++|+++||||.....
T Consensus 262 ~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 262 ALIRRCLAPKPSSRPSLEEILLDPWMQTPAE 292 (312)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred HHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence 4566667777777778888888888866543
No 475
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=88.53 E-value=0.046 Score=60.95 Aligned_cols=32 Identities=19% Similarity=0.306 Sum_probs=28.8
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
..+++.+||..||++|||++|+|+||||....
T Consensus 297 ~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 297 LQDVLKCCLKRDPKQRISIPELLAHPYVQIQT 328 (390)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred HHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence 46799999999999999999999999997543
No 476
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=88.49 E-value=0.042 Score=58.99 Aligned_cols=31 Identities=16% Similarity=0.401 Sum_probs=28.1
Q ss_pred CCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 908 KTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 908 ~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
...+++.+||..||++|||++|+++||||..
T Consensus 259 ~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 259 DFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289 (318)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHhhCHHHHh
Confidence 3467999999999999999999999999964
No 477
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=88.33 E-value=0.039 Score=59.57 Aligned_cols=30 Identities=23% Similarity=0.563 Sum_probs=23.1
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
+++.+||..||++|||++|+++||||....
T Consensus 265 ~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 265 SFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 566677778888888888888888887643
No 478
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=86.79 E-value=0.041 Score=59.52 Aligned_cols=30 Identities=30% Similarity=0.484 Sum_probs=27.5
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
..+++.+||..||++|||++|+++||||..
T Consensus 262 l~~li~~~l~~dp~~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 262 FINFVNLCLTKDESKRPKYKELLKHPFILM 291 (327)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHhhCChhhCcCHHHHHhChHHHH
Confidence 457999999999999999999999999964
No 479
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=86.44 E-value=0.2 Score=54.71 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=29.6
Q ss_pred CcccccccCCCCCCCCCCCcCCCCCCcccCCCC
Q 002174 909 TPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 909 ~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
..+++.+||..||++|||++|+++||||.....
T Consensus 282 l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 457999999999999999999999999977654
No 480
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=84.81 E-value=0.87 Score=32.49 Aligned_cols=8 Identities=13% Similarity=0.592 Sum_probs=4.8
Q ss_pred ceeehhHH
Q 002174 561 ALAGIILG 568 (956)
Q Consensus 561 ~~~~ii~g 568 (956)
.++++++|
T Consensus 13 ~Ia~~vVG 20 (44)
T 2jwa_A 13 SIISAVVG 20 (44)
T ss_dssp HHHHHHHH
T ss_pred chHHHHHH
Confidence 45666666
No 481
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=82.83 E-value=0.071 Score=59.94 Aligned_cols=33 Identities=6% Similarity=0.009 Sum_probs=29.0
Q ss_pred CCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 906 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 906 ~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
.....+++.+||..||++||++.|+++||||..
T Consensus 337 ~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 337 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 344567999999999999999999999999964
No 482
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=74.28 E-value=0.38 Score=54.67 Aligned_cols=59 Identities=5% Similarity=0.052 Sum_probs=16.9
Q ss_pred CCCeeeeeCCeeEEEEEeCC-CcEEEE------EEecCCChhh--HHHHHHHHHHHHhcCCCceeeeeccc
Q 002174 628 SSTQIGQGGYGKVYKGILPD-GTVVAV------KRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYC 689 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~ 689 (956)
+.+.|| ||.||+|.+.. ..+||| |..+...... ...+.+|..+++.++|+|+++.+++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 456676 99999999854 467888 7766533322 34688899999999999999987764
No 483
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=72.38 E-value=0.3 Score=52.37 Aligned_cols=26 Identities=4% Similarity=-0.031 Sum_probs=24.0
Q ss_pred cccccccCCCCCCCCCCCcCCCCCCc
Q 002174 910 PEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 910 ~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+++.+||+.||++|+|++|+|+||-
T Consensus 280 ~~ll~~~L~~dP~~R~s~~ell~h~~ 305 (319)
T 4euu_A 280 TPVLANILEADQEKCWGFDQFFAETS 305 (319)
T ss_dssp HHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred HHHHHHhccCChhhhccHHHhhhccH
Confidence 46899999999999999999999984
No 484
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=70.11 E-value=1.4 Score=46.09 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 866 CVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.++++.+++.+|++.||++||+++|+++.
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 44677899999999999999999999863
No 485
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=70.09 E-value=2.5 Score=45.98 Aligned_cols=33 Identities=6% Similarity=0.125 Sum_probs=30.0
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.++...+..+.+++.+|++.+|.+||++.++++
T Consensus 301 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 301 KFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp CCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred cCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 456788999999999999999999999999975
No 486
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=68.31 E-value=5.6 Score=28.44 Aligned_cols=23 Identities=9% Similarity=0.177 Sum_probs=16.7
Q ss_pred cceeehhHHHHHHHHHHHHHHHH
Q 002174 560 AALAGIILGAIAGAVTISAIVSL 582 (956)
Q Consensus 560 ~~~~~ii~g~~~~~~~~~~~~~~ 582 (956)
....+|+.|++.+++.+++++..
T Consensus 8 s~~~~IA~gVVgGv~~~~ii~~~ 30 (44)
T 2ks1_B 8 PKIPSIATGMVGALLLLLVVALG 30 (44)
T ss_dssp SCSSSSTHHHHHHHHHHHHHHHH
T ss_pred CCcceEEeehhHHHHHHHHHHHH
Confidence 56888888888888886654433
No 487
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=67.00 E-value=1.3 Score=45.94 Aligned_cols=29 Identities=17% Similarity=0.080 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 866 CVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.+..+.+++.+|++.+|.+||++.++++.
T Consensus 235 ~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 34568899999999999999999999753
No 488
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=66.18 E-value=2 Score=44.84 Aligned_cols=47 Identities=11% Similarity=0.177 Sum_probs=32.6
Q ss_pred CHHHHHHHHHHhHhhCCCCCCCCcccccccCCCCCCCCCCCcCCCCC
Q 002174 887 SMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 887 s~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
......+.........+.......+++.+||..||++|||++|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 269 (289)
T 4fvq_A 223 DSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRD 269 (289)
T ss_dssp CHHHHHHHHHTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred chHHHHHHhhccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 44444444333322333445667899999999999999999999875
No 489
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=65.55 E-value=3.1 Score=44.30 Aligned_cols=32 Identities=16% Similarity=0.211 Sum_probs=28.7
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.+..+++.+.+++.+|++.+|.+||++.++++
T Consensus 297 ~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 297 SQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 35677889999999999999999999999875
No 490
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=65.16 E-value=0.86 Score=49.25 Aligned_cols=36 Identities=17% Similarity=0.128 Sum_probs=29.6
Q ss_pred CCCCCCcccccccCCCCCCCCCCCcC-------------CCCCCcccCC
Q 002174 904 ESDTKTPEFINSEHTSKEETPPSSSS-------------MLKHPYVSSD 939 (956)
Q Consensus 904 ~~~~~~~~ll~~~L~~dP~~R~sa~e-------------~L~HP~f~~~ 939 (956)
...+.+.+||.+||+.||++|||++| +|+|||+..-
T Consensus 281 ~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 281 SCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred cCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence 33445578999999999999999998 4899999653
No 491
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=65.00 E-value=3.1 Score=45.64 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=26.0
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+||.+||..||++|||++|+|+||||++
T Consensus 370 ~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 370 DFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HHHHHHhccChhhcCCHHHHhhCccccC
Confidence 6888999999999999999999999974
No 492
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=64.69 E-value=3.5 Score=28.98 Aligned_cols=16 Identities=25% Similarity=0.304 Sum_probs=9.2
Q ss_pred eeehhHHHHHHHHHHH
Q 002174 562 LAGIILGAIAGAVTIS 577 (956)
Q Consensus 562 ~~~ii~g~~~~~~~~~ 577 (956)
+++|++|++++++.++
T Consensus 12 ~~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 12 NLAVIGGVAVGVVLLL 27 (41)
T ss_dssp STHHHHHHHHHHHHHH
T ss_pred eEEEEeehhHHHHHHH
Confidence 3456666666665544
No 493
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=63.92 E-value=7.9 Score=27.66 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=17.3
Q ss_pred CccceeehhHHHHHHHHHHHHHHHHHHHhh
Q 002174 558 SKAALAGIILGAIAGAVTISAIVSLLIVRA 587 (956)
Q Consensus 558 ~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~ 587 (956)
...++++.++|.++++++++..+.+++.|+
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 345677777777776666554433444333
No 494
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=60.49 E-value=16 Score=36.32 Aligned_cols=83 Identities=10% Similarity=0.003 Sum_probs=58.5
Q ss_pred CCCceeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHH-HhhhcCCCCEeccCCCcccE
Q 002174 678 HHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGIL-YLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 678 ~h~nIv~l~~~~~~~~~~~LV~E~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivH~Dlk~~NI 756 (956)
.||++ -...-.+++...+.|+.-+++-=...++ .++...+++++..|+.... ++++ -+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57777 3333466677777777653332233342 2677889999998887666 5544 47888999999
Q ss_pred EEcCCCcEEEEeeccc
Q 002174 757 LLDHKFTAKVADFGLS 772 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla 772 (956)
++|.++.+++.=.|+-
T Consensus 116 ~f~~~~~p~i~hRGi~ 131 (219)
T 4ano_A 116 MFNRALEPFFLHVGVK 131 (219)
T ss_dssp EECTTCCEEESCCEET
T ss_pred EEeCCCcEEEEEcCCc
Confidence 9999999999877764
No 495
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=60.22 E-value=2.9 Score=44.12 Aligned_cols=29 Identities=10% Similarity=0.175 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 866 CVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.+..+.+++.+|++.+|.+||++.++++.
T Consensus 257 ~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 257 ISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp CCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 45678899999999999999999999863
No 496
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=60.01 E-value=4.5 Score=43.40 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=27.6
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 863 PSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.......+.+++.+|++.+|.+||++.++++
T Consensus 303 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 303 DSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 4566788999999999999999999999875
No 497
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=59.34 E-value=5.4 Score=43.61 Aligned_cols=29 Identities=14% Similarity=0.155 Sum_probs=26.0
Q ss_pred ccccccCCCCCCCCCCCcCCCCCCcccCC
Q 002174 911 EFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 911 ~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
+||.+||++||++|||++|+|+||||...
T Consensus 351 dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 351 DLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 68888999999999999999999999764
No 498
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=58.54 E-value=0.89 Score=48.39 Aligned_cols=33 Identities=6% Similarity=0.075 Sum_probs=28.7
Q ss_pred CCCCcccccccCCCCCCCCCCCcCCCCCCcccC
Q 002174 906 DTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 906 ~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
.....+++.+||..||++||++.+++.|+|+..
T Consensus 247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 334567999999999999999999999999864
No 499
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=57.58 E-value=5.4 Score=41.47 Aligned_cols=26 Identities=19% Similarity=0.397 Sum_probs=23.5
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHH
Q 002174 868 EKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 868 ~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
..+.+++.+|++.+|.+||++.++++
T Consensus 253 ~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 253 PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 56778999999999999999999975
No 500
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=57.15 E-value=3.3 Score=45.48 Aligned_cols=33 Identities=30% Similarity=0.532 Sum_probs=26.3
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002174 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.+..++..+.+++.+|++.+|.+||++.++++.
T Consensus 302 ~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 302 YHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 345566789999999999999999999999853
Done!