Query 002175
Match_columns 956
No_of_seqs 279 out of 1798
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 15:34:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002175.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002175hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cob_A Kinesin heavy chain-lik 100.0 2.5E-55 8.7E-60 488.9 24.3 251 1-270 97-355 (369)
2 2h58_A Kinesin-like protein KI 100.0 2.5E-54 8.7E-59 474.8 23.3 224 1-225 98-329 (330)
3 2y65_A Kinesin, kinesin heavy 100.0 4.8E-54 1.7E-58 478.1 21.7 230 1-232 102-341 (365)
4 2vvg_A Kinesin-2; motor protei 100.0 5.6E-54 1.9E-58 475.3 20.3 228 1-231 107-342 (350)
5 2zfi_A Kinesin-like protein KI 100.0 1E-53 3.5E-58 475.8 20.7 229 1-229 107-359 (366)
6 1bg2_A Kinesin; motor protein, 100.0 1.4E-53 4.7E-58 468.2 19.9 222 1-224 95-325 (325)
7 3bfn_A Kinesin-like protein KI 100.0 1.1E-53 3.7E-58 478.1 18.8 230 1-231 116-354 (388)
8 1goj_A Kinesin, kinesin heavy 100.0 4.4E-53 1.5E-57 469.0 20.6 230 1-232 98-338 (355)
9 1f9v_A Kinesin-like protein KA 100.0 3E-53 1E-57 469.2 18.7 226 1-228 102-345 (347)
10 2rep_A Kinesin-like protein KI 100.0 4.6E-53 1.6E-57 471.8 20.3 224 1-224 133-376 (376)
11 1t5c_A CENP-E protein, centrom 100.0 7.8E-53 2.7E-57 466.1 21.9 229 1-233 95-337 (349)
12 2wbe_C Bipolar kinesin KRP-130 100.0 3.3E-53 1.1E-57 472.7 18.6 224 6-232 134-369 (373)
13 2owm_A Nckin3-434, related to 100.0 1.1E-52 3.6E-57 477.5 22.6 230 1-232 154-421 (443)
14 3t0q_A AGR253WP; kinesin, alph 100.0 5.7E-53 2E-57 467.2 19.9 224 1-226 103-346 (349)
15 3lre_A Kinesin-like protein KI 100.0 5.7E-53 1.9E-57 468.2 19.6 221 1-224 123-355 (355)
16 3gbj_A KIF13B protein; kinesin 100.0 6E-53 2E-57 467.8 19.5 223 1-223 110-349 (354)
17 3b6u_A Kinesin-like protein KI 100.0 9.1E-53 3.1E-57 468.7 20.5 229 1-231 119-360 (372)
18 1x88_A Kinesin-like protein KI 100.0 5.1E-53 1.7E-57 469.2 17.8 220 7-229 123-355 (359)
19 4etp_A Kinesin-like protein KA 100.0 3.5E-52 1.2E-56 468.6 20.9 226 1-228 158-401 (403)
20 4a14_A Kinesin, kinesin-like p 100.0 4.4E-52 1.5E-56 459.4 20.4 220 1-222 101-344 (344)
21 1ry6_A Internal kinesin; kines 100.0 8.9E-52 3E-56 459.2 20.6 219 5-229 111-336 (360)
22 2nr8_A Kinesin-like protein KI 100.0 3.3E-52 1.1E-56 462.4 16.4 222 1-224 121-358 (358)
23 3nwn_A Kinesin-like protein KI 100.0 3.4E-52 1.2E-56 462.4 16.4 222 1-224 122-359 (359)
24 3u06_A Protein claret segregat 100.0 1.5E-51 5.2E-56 464.3 17.8 224 1-228 156-386 (412)
25 2heh_A KIF2C protein; kinesin, 100.0 4.9E-51 1.7E-55 456.5 16.4 219 1-226 152-384 (387)
26 3dc4_A Kinesin-like protein NO 100.0 8.4E-51 2.9E-55 449.0 17.9 213 5-228 122-339 (344)
27 4h1g_A Maltose binding protein 100.0 2.6E-50 8.9E-55 481.2 20.3 220 6-225 483-712 (715)
28 1v8k_A Kinesin-like protein KI 100.0 8.4E-51 2.9E-55 457.3 14.6 216 6-228 183-406 (410)
29 2kin_B Kinesin; motor protein, 99.9 2.7E-25 9.2E-30 206.2 3.4 82 151-232 2-84 (100)
30 3kin_B Kinesin heavy chain; mo 99.9 3.3E-24 1.1E-28 204.1 9.8 113 154-271 1-114 (117)
31 2o0a_A S.cerevisiae chromosome 97.4 9.8E-05 3.3E-09 79.8 5.2 180 7-226 103-291 (298)
32 3na7_A HP0958; flagellar bioge 96.9 0.17 5.7E-06 53.7 23.6 24 252-275 24-47 (256)
33 2v71_A Nuclear distribution pr 96.5 0.22 7.4E-06 51.1 19.9 34 393-426 144-180 (189)
34 1c1g_A Tropomyosin; contractIl 96.5 0.45 1.5E-05 47.8 22.1 21 402-422 176-196 (284)
35 3oja_B Anopheles plasmodium-re 96.4 0.057 1.9E-06 62.7 16.7 61 306-366 523-583 (597)
36 3na7_A HP0958; flagellar bioge 96.0 0.37 1.3E-05 51.0 19.4 44 315-358 99-142 (256)
37 1i84_S Smooth muscle myosin he 96.0 0.027 9.1E-07 71.6 12.4 40 9-48 432-472 (1184)
38 1i84_S Smooth muscle myosin he 95.8 0.033 1.1E-06 70.7 11.8 10 188-197 766-775 (1184)
39 3ghg_A Fibrinogen alpha chain; 95.7 0.14 4.7E-06 59.2 15.0 36 414-449 233-268 (562)
40 3oja_B Anopheles plasmodium-re 95.7 0.073 2.5E-06 61.7 13.3 41 318-358 514-554 (597)
41 2v71_A Nuclear distribution pr 95.5 2.3 7.7E-05 43.7 21.8 17 393-409 137-153 (189)
42 3vkg_A Dynein heavy chain, cyt 95.1 0.39 1.3E-05 66.5 19.1 35 249-283 1930-1964(3245)
43 2dfs_A Myosin-5A; myosin-V, in 95.0 0.5 1.7E-05 59.6 18.8 40 9-48 406-445 (1080)
44 3vkg_A Dynein heavy chain, cyt 94.9 0.73 2.5E-05 63.9 21.0 47 870-916 2981-3035(3245)
45 3o0z_A RHO-associated protein 94.5 1.3 4.5E-05 44.6 16.4 53 306-358 62-114 (168)
46 2dfs_A Myosin-5A; myosin-V, in 93.7 1.5 5.1E-05 55.5 18.7 23 339-361 1021-1043(1080)
47 2fxo_A Myosin heavy chain, car 93.5 5.6 0.00019 38.1 19.2 108 253-360 13-123 (129)
48 1deq_A Fibrinogen (alpha chain 91.4 15 0.0005 41.4 20.4 94 249-342 63-156 (390)
49 1deq_A Fibrinogen (alpha chain 90.6 5.7 0.0002 44.5 16.3 20 256-275 63-82 (390)
50 1m1j_A Fibrinogen alpha subuni 90.4 13 0.00044 42.6 19.1 55 311-365 109-163 (491)
51 3mq7_A Bone marrow stromal ant 85.0 27 0.00093 33.2 15.8 30 397-426 82-111 (121)
52 3ghg_A Fibrinogen alpha chain; 84.6 11 0.00039 43.8 14.3 26 247-272 58-83 (562)
53 3oja_A Leucine-rich immune mol 84.2 47 0.0016 37.5 19.5 45 317-361 432-476 (487)
54 2ocy_A RAB guanine nucleotide 83.3 39 0.0013 33.7 16.0 32 325-356 113-144 (154)
55 3oja_A Leucine-rich immune mol 83.2 24 0.00083 39.8 16.6 32 327-358 435-466 (487)
56 3hnw_A Uncharacterized protein 83.0 25 0.00087 34.2 14.3 48 311-358 87-134 (138)
57 3mq9_A Bone marrow stromal ant 80.6 32 0.0011 38.6 16.3 27 334-360 443-469 (471)
58 2fxo_A Myosin heavy chain, car 79.9 43 0.0015 31.9 17.9 110 247-356 14-126 (129)
59 3u1c_A Tropomyosin alpha-1 cha 79.8 12 0.0004 34.5 10.2 21 337-357 40-60 (101)
60 1m1j_B Fibrinogen beta chain; 79.3 62 0.0021 37.4 18.0 27 335-361 169-195 (464)
61 3i00_A HIP-I, huntingtin-inter 78.8 5.9 0.0002 37.9 8.0 25 250-274 12-36 (120)
62 1m1j_B Fibrinogen beta chain; 78.7 65 0.0022 37.2 17.9 21 334-354 175-195 (464)
63 2jee_A YIIU; FTSZ, septum, coi 74.7 38 0.0013 30.4 11.4 50 312-361 26-75 (81)
64 2eqb_B RAB guanine nucleotide 74.6 54 0.0018 30.3 13.1 18 341-358 76-93 (97)
65 3u59_A Tropomyosin beta chain; 72.9 20 0.00068 32.9 9.6 17 340-356 43-59 (101)
66 1x79_B RAB GTPase binding effe 72.3 58 0.002 30.8 12.7 20 253-272 6-25 (112)
67 3tnu_A Keratin, type I cytoske 71.0 72 0.0025 30.4 13.5 20 253-272 38-57 (131)
68 3tnu_B Keratin, type II cytosk 70.8 73 0.0025 30.2 14.2 20 253-272 36-55 (129)
69 2zqm_A Prefoldin beta subunit 70.3 36 0.0012 31.1 10.9 92 332-427 18-111 (117)
70 3tnu_A Keratin, type I cytoske 70.1 70 0.0024 30.4 13.2 21 248-268 40-60 (131)
71 1f5n_A Interferon-induced guan 70.1 64 0.0022 38.3 15.6 70 294-363 507-582 (592)
72 3u1c_A Tropomyosin alpha-1 cha 69.7 68 0.0023 29.4 15.7 22 333-354 78-99 (101)
73 3mq7_A Bone marrow stromal ant 69.6 79 0.0027 30.1 13.7 18 256-273 28-45 (121)
74 3ghg_C Fibrinogen gamma chain; 69.6 49 0.0017 37.6 13.8 45 311-362 89-133 (411)
75 3tnu_B Keratin, type II cytosk 67.5 86 0.0029 29.7 14.1 22 247-268 37-58 (129)
76 3ol1_A Vimentin; structural ge 66.9 86 0.0029 29.5 14.2 16 339-354 88-103 (119)
77 4h22_A Leucine-rich repeat fli 66.9 41 0.0014 31.4 10.2 51 308-358 32-82 (103)
78 3ol1_A Vimentin; structural ge 65.9 61 0.0021 30.6 11.6 10 347-356 107-116 (119)
79 1f5n_A Interferon-induced guan 65.6 77 0.0026 37.6 15.0 13 410-422 570-582 (592)
80 2e7s_A RAB guanine nucleotide 65.6 35 0.0012 33.3 10.0 31 325-355 101-131 (135)
81 2i1j_A Moesin; FERM, coiled-co 65.1 25 0.00085 41.5 10.7 46 314-359 406-451 (575)
82 3hnw_A Uncharacterized protein 65.0 49 0.0017 32.2 11.0 48 314-361 83-130 (138)
83 3s4r_A Vimentin; alpha-helix, 64.2 59 0.002 29.5 10.7 25 311-335 54-78 (93)
84 1fxk_A Prefoldin; archaeal pro 64.1 65 0.0022 28.9 11.2 91 332-426 13-105 (107)
85 2v4h_A NF-kappa-B essential mo 63.8 96 0.0033 29.3 12.1 7 259-265 44-50 (110)
86 2eqb_B RAB guanine nucleotide 63.2 95 0.0032 28.7 14.6 37 242-278 8-44 (97)
87 3mq9_A Bone marrow stromal ant 63.2 1.4E+02 0.0047 33.5 16.0 31 332-362 434-464 (471)
88 1m1j_C Fibrinogen gamma chain; 62.1 55 0.0019 37.2 12.4 28 335-362 106-133 (409)
89 2v4h_A NF-kappa-B essential mo 61.8 65 0.0022 30.4 10.6 17 398-414 88-104 (110)
90 1go4_E MAD1 (mitotic arrest de 61.7 26 0.00089 32.6 7.9 29 331-359 16-44 (100)
91 3a7p_A Autophagy protein 16; c 60.9 1.1E+02 0.0037 30.5 12.5 41 318-358 73-113 (152)
92 3iox_A AGI/II, PA; alpha helix 58.7 2.6E+02 0.009 32.5 17.1 33 330-362 76-108 (497)
93 3iox_A AGI/II, PA; alpha helix 58.3 2.5E+02 0.0086 32.7 16.8 39 317-355 70-108 (497)
94 3u59_A Tropomyosin beta chain; 57.2 1.1E+02 0.0039 27.7 15.2 37 247-283 10-46 (101)
95 3a7p_A Autophagy protein 16; c 57.0 1.4E+02 0.0049 29.6 12.7 19 254-272 69-87 (152)
96 3ghg_B Fibrinogen beta chain; 57.0 1.6E+02 0.0055 34.0 14.9 29 335-363 164-192 (461)
97 2i1j_A Moesin; FERM, coiled-co 56.1 13 0.00044 43.9 6.2 23 404-426 437-459 (575)
98 2k48_A Nucleoprotein; viral pr 53.3 61 0.0021 30.3 8.8 31 332-362 73-103 (107)
99 3q8t_A Beclin-1; autophagy, AT 53.1 1.3E+02 0.0046 27.3 14.8 30 332-361 65-94 (96)
100 1wt6_A Myotonin-protein kinase 52.1 1.2E+02 0.0039 27.3 10.0 38 326-363 37-74 (81)
101 3nmd_A CGMP dependent protein 50.2 58 0.002 28.6 7.7 21 332-352 45-65 (72)
102 3nmd_A CGMP dependent protein 49.1 43 0.0015 29.4 6.7 30 331-360 37-66 (72)
103 3m50_P N.plumbaginifolia H+-tr 48.5 6.4 0.00022 29.3 1.3 17 646-662 14-30 (31)
104 2ocy_A RAB guanine nucleotide 47.9 2.2E+02 0.0076 28.3 18.8 39 327-365 108-146 (154)
105 1m1j_C Fibrinogen gamma chain; 45.9 3.5E+02 0.012 30.7 15.5 47 311-357 89-135 (409)
106 3i00_A HIP-I, huntingtin-inter 45.7 1.7E+02 0.0058 27.9 10.9 58 292-349 19-76 (120)
107 3he5_A Synzip1; heterodimeric 45.6 74 0.0025 25.0 6.8 41 317-357 7-47 (49)
108 2w83_C C-JUN-amino-terminal ki 45.5 1.1E+02 0.0036 27.2 8.6 40 318-357 35-74 (77)
109 1gmj_A ATPase inhibitor; coile 45.4 1.3E+02 0.0045 27.2 9.4 30 333-362 50-79 (84)
110 1x79_B RAB GTPase binding effe 44.4 2.1E+02 0.0072 27.0 13.3 16 253-268 13-28 (112)
111 3swk_A Vimentin; cytoskeleton, 44.0 1.8E+02 0.006 26.0 10.4 21 333-353 62-82 (86)
112 2ic6_A Nucleocapsid protein; h 43.4 1.1E+02 0.0038 27.2 8.5 31 332-362 43-73 (78)
113 1l8d_A DNA double-strand break 43.4 1.9E+02 0.0064 26.2 11.9 33 392-424 70-102 (112)
114 1m1j_A Fibrinogen alpha subuni 42.0 4.3E+02 0.015 30.5 15.1 25 248-272 60-84 (491)
115 2v66_B Nuclear distribution pr 41.9 2.3E+02 0.0078 26.7 16.1 22 250-271 7-28 (111)
116 3ghg_C Fibrinogen gamma chain; 41.8 2.1E+02 0.0071 32.6 12.7 29 335-363 99-127 (411)
117 1deb_A APC protein, adenomatou 41.2 1E+02 0.0036 25.3 7.3 34 249-282 6-39 (54)
118 4gkw_A Spindle assembly abnorm 40.8 2.6E+02 0.009 27.1 22.8 30 329-358 100-129 (167)
119 3he5_B Synzip2; heterodimeric 40.1 1.4E+02 0.0046 23.9 7.6 40 318-357 8-47 (52)
120 2zqm_A Prefoldin beta subunit 39.2 2.2E+02 0.0075 25.7 13.7 29 333-361 83-111 (117)
121 4fla_A Regulation of nuclear P 38.6 3E+02 0.01 27.1 12.3 63 293-355 73-135 (152)
122 2jee_A YIIU; FTSZ, septum, coi 38.4 2.2E+02 0.0075 25.5 12.0 16 332-347 60-75 (81)
123 4fi5_A Nucleoprotein; structur 38.2 1.3E+02 0.0045 28.4 8.6 33 332-364 60-92 (113)
124 3ghg_B Fibrinogen beta chain; 38.0 3.2E+02 0.011 31.5 13.6 25 332-356 168-192 (461)
125 2ic9_A Nucleocapsid protein; h 37.2 1.5E+02 0.005 27.4 8.5 32 332-363 43-74 (96)
126 2v66_B Nuclear distribution pr 36.8 2.7E+02 0.0094 26.2 17.1 24 253-276 3-26 (111)
127 1ik9_A DNA repair protein XRCC 36.2 3.8E+02 0.013 27.7 14.2 10 212-221 124-133 (213)
128 1ic2_A Tropomyosin alpha chain 35.0 2.3E+02 0.0078 24.7 11.0 25 334-358 48-72 (81)
129 1wt6_A Myotonin-protein kinase 35.0 2.5E+02 0.0085 25.2 9.4 23 331-353 49-71 (81)
130 2e7s_A RAB guanine nucleotide 35.0 65 0.0022 31.4 6.3 29 332-360 101-129 (135)
131 3efg_A Protein SLYX homolog; x 34.9 1E+02 0.0034 27.3 7.0 47 315-361 16-62 (78)
132 3hhm_B NISH2 P85alpha; PI3KCA, 34.1 5.3E+02 0.018 28.7 17.8 49 315-363 207-255 (373)
133 3iv1_A Tumor susceptibility ge 30.8 2.9E+02 0.0098 24.6 11.1 43 318-360 30-72 (78)
134 4h22_A Leucine-rich repeat fli 30.6 3.3E+02 0.011 25.4 9.9 18 254-271 24-41 (103)
135 1fxk_C Protein (prefoldin); ar 30.4 3.4E+02 0.012 25.3 10.7 32 392-423 87-118 (133)
136 2zxx_A Geminin; coiled-coil, c 30.3 3E+02 0.01 24.6 9.1 47 230-276 11-57 (79)
137 3q8t_A Beclin-1; autophagy, AT 30.1 3.2E+02 0.011 24.8 14.1 27 250-276 8-34 (96)
138 2dq3_A Seryl-tRNA synthetase; 30.0 2.1E+02 0.0072 32.3 10.5 37 390-426 72-108 (425)
139 3bas_A Myosin heavy chain, str 29.8 3E+02 0.01 24.5 11.2 22 251-272 12-33 (89)
140 1ci6_A Transcription factor AT 29.3 2.5E+02 0.0087 23.5 8.6 29 328-356 31-59 (63)
141 3hhm_B NISH2 P85alpha; PI3KCA, 28.7 6.5E+02 0.022 28.0 16.5 49 314-362 199-247 (373)
142 3lay_A Zinc resistance-associa 28.6 2.1E+02 0.0073 28.8 9.1 17 255-271 87-103 (175)
143 1t6f_A Geminin; coiled-coil, c 27.9 1.1E+02 0.0037 23.6 5.0 28 327-354 7-34 (37)
144 3bas_A Myosin heavy chain, str 27.8 3.2E+02 0.011 24.3 11.3 30 246-275 14-43 (89)
145 2q6q_A Spindle POLE BODY compo 27.8 3E+02 0.01 23.9 8.4 39 244-282 8-46 (74)
146 3iv1_A Tumor susceptibility ge 27.8 3.3E+02 0.011 24.3 10.6 20 335-354 54-73 (78)
147 3cvf_A Homer-3, homer protein 27.6 1.9E+02 0.0064 25.8 7.4 71 324-425 3-73 (79)
148 1fxk_A Prefoldin; archaeal pro 27.3 3.3E+02 0.011 24.2 12.7 22 336-357 81-102 (107)
149 2dq0_A Seryl-tRNA synthetase; 26.6 4E+02 0.014 30.4 12.0 37 330-366 72-108 (455)
150 4etp_A Kinesin-like protein KA 26.6 1.8E+02 0.0063 32.6 9.1 43 311-353 15-57 (403)
151 2oqq_A Transcription factor HY 26.1 2E+02 0.0068 22.8 6.4 34 324-357 7-40 (42)
152 2zdi_C Prefoldin subunit alpha 25.5 2.6E+02 0.009 26.8 9.0 40 323-362 12-54 (151)
153 3s9g_A Protein hexim1; cyclin 25.2 4.2E+02 0.014 24.6 9.7 20 302-321 40-59 (104)
154 3tul_A Cell invasion protein S 25.1 3.4E+02 0.012 26.8 9.4 23 335-357 70-92 (158)
155 1t6f_A Geminin; coiled-coil, c 24.9 97 0.0033 23.8 4.3 29 393-421 7-35 (37)
156 3m91_A Proteasome-associated A 24.8 2.6E+02 0.009 22.9 7.2 37 317-353 13-49 (51)
157 3efg_A Protein SLYX homolog; x 24.4 2.5E+02 0.0086 24.7 7.7 49 317-365 11-59 (78)
158 2dq0_A Seryl-tRNA synthetase; 23.9 3.6E+02 0.012 30.8 11.0 35 392-426 75-109 (455)
159 2lw1_A ABC transporter ATP-bin 23.8 3.7E+02 0.013 23.7 8.8 29 243-271 19-47 (89)
160 1wle_A Seryl-tRNA synthetase; 23.5 6.7E+02 0.023 29.1 13.3 37 330-366 119-155 (501)
161 3qne_A Seryl-tRNA synthetase, 22.9 3.8E+02 0.013 31.1 11.0 35 392-426 77-111 (485)
162 1t2k_D Cyclic-AMP-dependent tr 22.9 3.2E+02 0.011 22.5 10.0 27 330-356 32-58 (61)
163 1lwu_C Fibrinogen gamma chain; 22.8 1.7E+02 0.0058 32.3 7.7 20 335-354 34-53 (323)
164 3s9g_A Protein hexim1; cyclin 22.6 4.2E+02 0.014 24.6 8.9 48 318-365 42-89 (104)
165 2zq5_A Putative uncharacterize 22.5 48 0.0016 36.4 3.4 76 501-608 25-104 (384)
166 1wle_A Seryl-tRNA synthetase; 22.3 4E+02 0.014 30.9 11.1 20 687-707 429-451 (501)
167 4emc_A Monopolin complex subun 22.2 3E+02 0.01 28.2 8.7 28 245-272 12-39 (190)
168 2avr_X Adhesion A; antiparalle 21.7 5.3E+02 0.018 24.6 12.5 13 254-266 10-22 (119)
169 2b9c_A Striated-muscle alpha t 21.6 5.7E+02 0.019 24.9 13.0 19 339-357 99-117 (147)
170 1fxk_C Protein (prefoldin); ar 21.2 5E+02 0.017 24.1 12.6 20 251-270 13-32 (133)
171 1go4_E MAD1 (mitotic arrest de 20.9 5E+02 0.017 24.0 9.2 22 338-359 72-93 (100)
172 3u06_A Protein claret segregat 20.8 2.1E+02 0.0072 32.3 8.2 13 546-558 169-181 (412)
173 3trt_A Vimentin; cytoskeleton, 20.8 3.9E+02 0.013 22.7 10.7 17 341-357 56-72 (77)
174 3lay_A Zinc resistance-associa 20.6 6.5E+02 0.022 25.2 11.0 30 394-426 114-143 (175)
175 4emc_A Monopolin complex subun 20.3 5.1E+02 0.017 26.5 9.9 25 303-327 31-55 (190)
176 2oto_A M protein; helical coil 20.2 5.9E+02 0.02 24.5 18.4 10 257-266 33-42 (155)
177 2b5u_A Colicin E3; high resolu 20.0 1.1E+03 0.037 27.6 15.4 127 292-424 295-426 (551)
No 1
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=2.5e-55 Score=488.92 Aligned_cols=251 Identities=33% Similarity=0.447 Sum_probs=221.6
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC--CCceEeeccc--ccccceeEEEe
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN--GLAKIRLQSL--ESSIELVQEKV 76 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~--~~~~v~~~~~--~~V~gLtev~V 76 (956)
|+|+++++|||||++++||+.+... .....|.|+|||+|||||+|||||.+... ....++.+.. .+|.|++++.|
T Consensus 97 M~G~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~e~~~~~~~v~gl~~~~v 175 (369)
T 3cob_A 97 IYGADSNPGLTPRAMSELFRIMKKD-SNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKDSKGMVSVENVTVVSI 175 (369)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHHHHT-TTTEEEEEEEEEEEECSSCEEESSCCSSSCCCCCEEEECTTSCEEEETCCCEEE
T ss_pred ecCCCCCCchhHHHHHHHHHHHHhh-ccCceeEEEEEEEEEeCceeeecCCCcccCCcceEEEECCCCCEEccCCEEEEe
Confidence 7899999999999999999999864 34479999999999999999999988543 3445666554 35679999999
Q ss_pred CCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHHH
Q 002175 77 DNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLH 152 (956)
Q Consensus 77 ~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~ 152 (956)
.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.+++|+.+
T Consensus 176 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~ 255 (369)
T 3cob_A 176 STYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQS 255 (369)
T ss_dssp CSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCCCCcEEEEEEEEEeCCCCCcccccCccchhhHHHHH
Confidence 99999999999999999999987 99999999999999988888888999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccCccc
Q 002175 153 VMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNRD 232 (956)
Q Consensus 153 INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~n~~ 232 (956)
||+||++||+||.+|++++.|||||+||||+||+|+|||||+|+||+||||+..+++||++||+||+||++|++.+..+.
T Consensus 256 INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~rak~i~~~~~~n~ 335 (369)
T 3cob_A 256 INKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNV 335 (369)
T ss_dssp HTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCCCCE
T ss_pred HHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhcccCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887665543
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 233 TIKKWRDIANDARKELYEREKEIQDLKQEILGLRQALK 270 (956)
Q Consensus 233 ~i~k~k~~~~~~r~el~~~~~eI~~Lq~EI~~Lk~~L~ 270 (956)
.. .+|.+|+.++..++++..
T Consensus 336 ~~------------------~ei~~L~~~l~~~~~~~~ 355 (369)
T 3cob_A 336 SS------------------KEVARLKKLVSYWKEQAG 355 (369)
T ss_dssp EC------------------HHHHHHHHHTTCC-----
T ss_pred CH------------------HHHHHHHHHHHHHHHhcC
Confidence 22 456667777766665543
No 2
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-54 Score=474.85 Aligned_cols=224 Identities=36% Similarity=0.511 Sum_probs=199.2
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEee--cc--cccccceeEEEe
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRL--QS--LESSIELVQEKV 76 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~--~~--~~~V~gLtev~V 76 (956)
|+|+++++|||||++++||..++. ...+..|.|+|||+|||||+|||||.+.+.....++. +. ..+|.|++++.|
T Consensus 98 m~G~~~~~Giipr~~~~lF~~i~~-~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~~~~~v~gl~~~~v 176 (330)
T 2h58_A 98 MEGTAENPGINQRALQLLFSEVQE-KASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQV 176 (330)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHHHT-SCTTEEEEEEEEEEEEETTEEEETTSCSSCCCCCCEECTTSSCCEECTTCCCEEE
T ss_pred EecCCCCCcHHHHHHHHHHHhhhc-ccCCceEEEEEEEEEEECCChhhcccccccccceEEEeecCCCCEecCCCEEEEe
Confidence 789999999999999999999975 3567899999999999999999999876544444443 32 246779999999
Q ss_pred CCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHHH
Q 002175 77 DNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLH 152 (956)
Q Consensus 77 ~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~ 152 (956)
.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.+++|+.+
T Consensus 177 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~ 256 (330)
T 2h58_A 177 QSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQH 256 (330)
T ss_dssp CSHHHHHHHHHHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCCCC------HHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCcccccCCCCcCCccEEEEEEEEEEecCCCcEEEEEEEEEeCCCCCcccccCCchhhhHHHHH
Confidence 99999999999999999999987 99999999999999887777788999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccc
Q 002175 153 VMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTV 225 (956)
Q Consensus 153 INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~ 225 (956)
||+||++||+||.+|.+++.|||||+||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|+
T Consensus 257 IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lL~dsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~i~ 329 (330)
T 2h58_A 257 INKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVE 329 (330)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC---
T ss_pred hhHhHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHhCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 3
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=4.8e-54 Score=478.14 Aligned_cols=230 Identities=30% Similarity=0.456 Sum_probs=193.1
Q ss_pred CCCC---CCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEE
Q 002175 1 MEGS---SHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEK 75 (956)
Q Consensus 1 M~Gs---~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~ 75 (956)
|+|+ +.++|||||++++||+.+... ..+.+|.|+|||+|||||+|||||++..... .++.+.. .+|.|++++.
T Consensus 102 m~G~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l-~i~e~~~~~~~v~gl~~~~ 179 (365)
T 2y65_A 102 MEGVIGDSVKQGIIPRIVNDIFNHIYAM-EVNLEFHIKVSYYEIYMDKIRDLLDVSKVNL-SVHEDKNRVPYVKGATERF 179 (365)
T ss_dssp HTBSTTCTTTBCHHHHHHHHHHHHHHHC-CSCEEEEEEEEEEEEETTEEEETTCTTCCSB-CEEECSSSCEEETTCCCEE
T ss_pred EecCCCCcccCChHHHHHHHHHHHHHhc-cCCceEEEEEEEEEEECCeeeecccCCcCCc-eEEECCCCCEEecCCEEEe
Confidence 5665 456799999999999999753 5678999999999999999999998765443 4555443 3577999999
Q ss_pred eCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHH
Q 002175 76 VDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVL 151 (956)
Q Consensus 76 V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~ 151 (956)
|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.+++|+.
T Consensus 180 V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~ 259 (365)
T 2y65_A 180 VSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAK 259 (365)
T ss_dssp ECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC---------------
T ss_pred cCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCCCEeEEEEEEEECCCCCcchhcCCcchhHHHHH
Confidence 999999999999999999999998 9999999999999988877778889999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHhhcC-CCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccCc
Q 002175 152 HVMKSLSALGDVLSSLTSR-KDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGN 230 (956)
Q Consensus 152 ~INkSL~aLg~VI~aLs~k-~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~n 230 (956)
+||+||++||+||.+|+++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||++|++.+..
T Consensus 260 ~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~~ 339 (365)
T 2y65_A 260 NINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCV 339 (365)
T ss_dssp -CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCEEECCC
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecCccCCHHHHHHHHHHHHHHhcccCccee
Confidence 9999999999999999986 579999999999999999999999999999999999999999999999999999887665
Q ss_pred cc
Q 002175 231 RD 232 (956)
Q Consensus 231 ~~ 232 (956)
+.
T Consensus 340 n~ 341 (365)
T 2y65_A 340 NE 341 (365)
T ss_dssp EE
T ss_pred CC
Confidence 44
No 4
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=5.6e-54 Score=475.34 Aligned_cols=228 Identities=33% Similarity=0.469 Sum_probs=185.6
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEEeCC
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEKVDN 78 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~V~S 78 (956)
|+|+++++|||||++++||+.+.. ...+..|.|+|||+|||||+|||||.+.. ...++.+.. .+|.|++++.|.|
T Consensus 107 m~G~~~~~Giipr~~~~lF~~i~~-~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--~l~i~e~~~~~~~v~gl~~~~v~s 183 (350)
T 2vvg_A 107 MGGNKEEPGAIPNSFKHLFDAINS-SSSNQNFLVIGSYLELYNEEIRDLIKNNT--KLPLKEDKTRGIYVDGLSMHRVTT 183 (350)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHHHT-CCTTEEEEEEEEEEEEETTEEEETTTTEE--EECEEEETTTEEEETTCCCEEESS
T ss_pred eecCCccCchHHHHHHHHHHHHHh-hccCCcEEEEEEEEEEeCCEEEEcccCCc--CceeeEcCCCCEEecCCEEEEcCC
Confidence 789999999999999999999974 35678999999999999999999998532 234454443 4677999999999
Q ss_pred HHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCc--eeeeeeEEeeccCCCccccCCCcchhhHhHHH
Q 002175 79 PLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGE--NLYSKLSLVDLAGSEGLIAEDDSGERITDVLH 152 (956)
Q Consensus 79 ~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~--~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~ 152 (956)
++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+. ...|+|+|||||||||..++++.|.+++|+.+
T Consensus 184 ~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~ 263 (350)
T 2vvg_A 184 AAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAK 263 (350)
T ss_dssp HHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----CEEEEEEEEEEECCCCCC---------------C
T ss_pred HHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeeccCCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHH
Confidence 999999999999999999987 999999999999987764433 46799999999999999999999999999999
Q ss_pred HhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccCcc
Q 002175 153 VMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNR 231 (956)
Q Consensus 153 INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~n~ 231 (956)
||+||++||+||.+|.+++.|||||+||||+||+|+|||||+|+||+||||+..+++||++||+||+||++|++.+..+
T Consensus 264 IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETl~TL~fA~rak~i~n~~~~n 342 (350)
T 2vvg_A 264 INLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYDETMSTLRYADRAKQIKNKPRIN 342 (350)
T ss_dssp TTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCCCCCC
T ss_pred HhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHHHHhhccccceec
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998876544
No 5
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=1e-53 Score=475.79 Aligned_cols=229 Identities=29% Similarity=0.457 Sum_probs=193.6
Q ss_pred CCCCC--CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEEe
Q 002175 1 MEGSS--HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEKV 76 (956)
Q Consensus 1 M~Gs~--~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~V 76 (956)
|+|+. +++|||||++++||+.+......+..|.|+|||+|||||+|||||.+.......++.+.. .+|.|++++.|
T Consensus 107 m~G~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~~l~ire~~~~g~~v~gl~~~~V 186 (366)
T 2zfi_A 107 MMGKQEKDQQGIIPQLCEDLFSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPKNKGNLRVREHPLLGPYVEDLSKLAV 186 (366)
T ss_dssp HTBCSGGGCBCHHHHHHHHHHHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTTTCSCBCEEEETTTEEEETTCCCEEC
T ss_pred eeCCCccCCCccHHHHHHHHHHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccccCCCceEEEcCCCCEEEeCCEEEEE
Confidence 67874 578999999999999998765667899999999999999999999987665566776654 45779999999
Q ss_pred CCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCC----ceeeeeeEEeeccCCCccccCCCcchhhH
Q 002175 77 DNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITG----ENLYSKLSLVDLAGSEGLIAEDDSGERIT 148 (956)
Q Consensus 77 ~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~----~~~~SkLsfVDLAGSER~~kt~s~G~rlk 148 (956)
.|++|++.+|..|.++|++++|. |||||+||+|+|.+...... ....|+|+|||||||||..++++.|.+++
T Consensus 187 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~ 266 (366)
T 2zfi_A 187 TSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLK 266 (366)
T ss_dssp CSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCHH
T ss_pred CCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccCCCccchh
Confidence 99999999999999999999987 99999999999998754332 24579999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHhhc------------CCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHH
Q 002175 149 DVLHVMKSLSALGDVLSSLTS------------RKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLN 216 (956)
Q Consensus 149 Ea~~INkSL~aLg~VI~aLs~------------k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLr 216 (956)
|+.+||+||++||+||.+|++ +..||||||||||+||+|+|||||+|+||+||||+..+++||++||+
T Consensus 267 E~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLr 346 (366)
T 2zfi_A 267 EGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLR 346 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--------------CCGGGSHHHHHTGGGSSTTCEEEEEEEECCBGGGHHHHHHHHH
T ss_pred hhhhHhHHHHHHHHHHHHHHhcccccccccccccCCcccccccHHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHH
Confidence 999999999999999999986 34799999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccC
Q 002175 217 FSSRARSTVLSLG 229 (956)
Q Consensus 217 FAsrAK~I~~~~~ 229 (956)
||+|||+|++.+.
T Consensus 347 fA~rak~I~~~~~ 359 (366)
T 2zfi_A 347 YADRAKQIRNTVS 359 (366)
T ss_dssp HHHHTC-------
T ss_pred HHHHHhhccCCCC
Confidence 9999999887554
No 6
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=1.4e-53 Score=468.16 Aligned_cols=222 Identities=32% Similarity=0.464 Sum_probs=203.9
Q ss_pred CCCCC---CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEE
Q 002175 1 MEGSS---HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEK 75 (956)
Q Consensus 1 M~Gs~---~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~ 75 (956)
|+|+. +++|||||++++||+.+... .++.+|.|+|||+|||||+|||||++..... .++.+.. .++.|++++.
T Consensus 95 m~G~~~~~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~v~DLL~~~~~~l-~i~e~~~~~~~v~gl~~~~ 172 (325)
T 1bg2_A 95 MEGKLHDPEGMGIIPRIVQDIFNYIYSM-DENLEFHIKVSYFEIYLDKIRDLLDVSKTNL-SVHEDKNRVPYVKGCTERF 172 (325)
T ss_dssp HTBSTTCTTTBCHHHHHHHHHHHHHHHH-CSSEEEEEEEEEEEEETTEEEESSCTTCCSB-CEEECTTSCEEETTCCCEE
T ss_pred ecccCCCcccCccHHHHHHHHHHHHHhc-cCCceEEEEEEEEEEecCeeeecccCCCCCc-eEEECCCCCEEecCceEEe
Confidence 67764 45699999999999999753 4678999999999999999999998865443 4555443 3577999999
Q ss_pred eCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHH
Q 002175 76 VDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVL 151 (956)
Q Consensus 76 V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~ 151 (956)
|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||.+++++.|.+++|+.
T Consensus 173 v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~ 252 (325)
T 1bg2_A 173 VCSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAK 252 (325)
T ss_dssp ECSHHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCC
T ss_pred CCCHHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecCCCcEEEEEEEEEECCCCCcccccCCccccchHHH
Confidence 999999999999999999999998 9999999999999988877778889999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccc
Q 002175 152 HVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARST 224 (956)
Q Consensus 152 ~INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I 224 (956)
+||+||++||+||.+|+++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 253 ~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGns~t~mia~vsP~~~~~~ETl~TL~fa~rak~I 325 (325)
T 1bg2_A 253 NINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 325 (325)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHGGGTSSSSCEEEEEEEECCBGGGHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccccHHHHHHHHHhCCCCcEEEEEEECCccccHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999975
No 7
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-53 Score=478.09 Aligned_cols=230 Identities=27% Similarity=0.398 Sum_probs=183.6
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccC--CCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEEe
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSD--TTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEKV 76 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~--~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~V 76 (956)
|+|+++++|||||++++||+.+... ......|.|+|||+|||||+|||||.+....+ .++.+.. .+|.|++++.|
T Consensus 116 M~G~~~~~Giipra~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~l-~ired~~~~v~v~gl~~~~V 194 (388)
T 3bfn_A 116 MLGSPEQPGVIPRALMDLLQLTREEGAEGRPWALSVTMSYLEIYQEKVLDLLDPASGDL-VIREDCRGNILIPGLSQKPI 194 (388)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHHHHHTSTTCSEEEEEEEEEEEEETTEEEESSSCSSCBC-CCEECTTSCEECTTCCCEEC
T ss_pred eecCccccchhHHHHHHHHHHHHHhhccCCCceEEEEEEEEEEECCeeeehhccCCCCc-eEEEcCCCCEEeccceEEEe
Confidence 7899999999999999999999753 24567899999999999999999998865443 4555443 45779999999
Q ss_pred CCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCC-CceeeeeeEEeeccCCCccccCCCcchhhHhHH
Q 002175 77 DNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLIT-GENLYSKLSLVDLAGSEGLIAEDDSGERITDVL 151 (956)
Q Consensus 77 ~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~-~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~ 151 (956)
.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+... .....|+|+|||||||||..++++.|.+++|+.
T Consensus 195 ~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~ 274 (388)
T 3bfn_A 195 SSFADFERHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESG 274 (388)
T ss_dssp CSHHHHHHHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEEEEEEEEEECCCTTC--------------C
T ss_pred CCHHHHHHHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCCCceeEEEEEEEECCCCcccccccCccchhHHHh
Confidence 99999999999999999999987 9999999999999876543 345789999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccCcc
Q 002175 152 HVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNR 231 (956)
Q Consensus 152 ~INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~n~ 231 (956)
+||+||++||+||.+|.++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||++|++.+..+
T Consensus 275 ~INkSL~aLg~vI~aL~~~~~hVPYRdSkLTrlLqdsLgGnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~I~n~p~~n 354 (388)
T 3bfn_A 275 AINTSLFVLGKVVDALNQGLPRVPYRDSKLTRLLQDSLGGSAHSILIANIAPERRFYLDTVSALNFAARSKEVINRPFTN 354 (388)
T ss_dssp CCCHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTTTSSSTTCEEEEEEEECCSGGGHHHHHHHHHHHCSEEEEC------
T ss_pred HhhhhHHHHHHHHHHHhcCCCCCcCcccHHHHHHHHhhCCCccEEEEEEECCccccHHHHHHHHHHHHHHhhCcCcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987765443
No 8
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=4.4e-53 Score=469.02 Aligned_cols=230 Identities=33% Similarity=0.456 Sum_probs=208.9
Q ss_pred CCCC----CCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEE
Q 002175 1 MEGS----SHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQE 74 (956)
Q Consensus 1 M~Gs----~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev 74 (956)
|+|+ ++++|||||++++||+.+.. ...+.+|.|+|||+|||||+|||||.+..... .++.+.. .++.|++++
T Consensus 98 m~G~~~~~~~~~Giipr~~~~lF~~i~~-~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~l-~i~e~~~~g~~v~gl~~~ 175 (355)
T 1goj_A 98 MMGTSIDDPDGRGVIPRIVEQIFTSILS-SAANIEYTVRVSYMEIYMERIRDLLAPQNDNL-PVHEEKNRGVYVKGLLEI 175 (355)
T ss_dssp HTBSCTTSTTTBCHHHHHHHHHHHHHHT-SCTTEEEEEEEEEEEEETTEEEETTSTTCCSC-CEEEETTTEEEETTCCCE
T ss_pred eecCCCCCcccCCchHHHHHHHHHHHHh-cccCceEEEEEEEEEEECCEEEEcccCccCCc-eeEEcCCCCEeecCCEEE
Confidence 6775 46789999999999999975 35678999999999999999999999866544 3444433 467799999
Q ss_pred EeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhH
Q 002175 75 KVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDV 150 (956)
Q Consensus 75 ~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa 150 (956)
.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.+++|+
T Consensus 176 ~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~ 255 (355)
T 1goj_A 176 YVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEA 255 (355)
T ss_dssp ECCSHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTT
T ss_pred eCCCHHHHHHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccCCCceeeeEEEEEECCCCCcccccccchhhHHHH
Confidence 9999999999999999999998886 999999999999999888888889999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHhhcC-CCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccC
Q 002175 151 LHVMKSLSALGDVLSSLTSR-KDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLG 229 (956)
Q Consensus 151 ~~INkSL~aLg~VI~aLs~k-~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~ 229 (956)
.+||+||++||+||.+|.++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|++.+.
T Consensus 256 ~~IN~SL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGns~t~mI~~isP~~~~~~ETl~TL~fA~rak~I~n~~~ 335 (355)
T 1goj_A 256 KKINKSLSALGMVINALTDGKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAK 335 (355)
T ss_dssp GGGTSHHHHHHHHHHHHHHCSCSCCCGGGCHHHHHTGGGTTSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCBCCCC
T ss_pred HhhhhHHHHHHHHHHHHhcCCCCCCCCccCHHHHHHHHHhCCCCcEEEEEEECcccccHHHHHHHHHHHHHHhhccCCce
Confidence 99999999999999999985 58999999999999999999999999999999999999999999999999999988766
Q ss_pred ccc
Q 002175 230 NRD 232 (956)
Q Consensus 230 n~~ 232 (956)
.+.
T Consensus 336 vn~ 338 (355)
T 1goj_A 336 VNA 338 (355)
T ss_dssp CCS
T ss_pred eCC
Confidence 543
No 9
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=3e-53 Score=469.16 Aligned_cols=226 Identities=33% Similarity=0.469 Sum_probs=191.1
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCC--------CceEeecc---ccccc
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNG--------LAKIRLQS---LESSI 69 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~--------~~~v~~~~---~~~V~ 69 (956)
|+|+ ++|||||++++||+.+......+.+|.|+|||+|||||+|||||.+.... ...++.++ ..++.
T Consensus 102 M~G~--~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~ 179 (347)
T 1f9v_A 102 MLNP--GDGIIPSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTIT 179 (347)
T ss_dssp HHST--TTSHHHHHHHHHHHHHHHHGGGTCEEEEEEEEEEEETTEEEETTC-------------CCCEEEETTTTEEEET
T ss_pred ccCC--CCCchHHHHHHHHHHHHhhhhcCCceEEEEEEEEEECCeeeeccCCccccccccccCCceeEEEecCCCceEec
Confidence 4553 57999999999999997655567899999999999999999999875432 22344332 24677
Q ss_pred ceeEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcch
Q 002175 70 ELVQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGE 145 (956)
Q Consensus 70 gLtev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~ 145 (956)
|++++.|.+++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.
T Consensus 180 ~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~ 259 (347)
T 1f9v_A 180 NVTSCKLESEEMVEIILKKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGD 259 (347)
T ss_dssp TCCCEECSSGGGHHHHHHHHC-----------CCGGGSEEEEEEEEEEECC--CCEEEEEEEEEECCCCCCCCGGGCCHH
T ss_pred CCEEEEcCCHHHHHHHHHHHHhccceeeccCCCCCCCceEEEEEEEEEecCCCCceeeeEEEEEECCCCccccccccchh
Confidence 999999999999999999999999999987 9999999999999988777778899999999999999999999999
Q ss_pred hhHhHHHHhhhHHHHHHHHHHhhcCC---CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhc
Q 002175 146 RITDVLHVMKSLSALGDVLSSLTSRK---DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRAR 222 (956)
Q Consensus 146 rlkEa~~INkSL~aLg~VI~aLs~k~---~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK 222 (956)
+++|+.+||+||++||+||.+|.+++ .||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++
T Consensus 260 rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~r~~ 339 (347)
T 1f9v_A 260 RLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVN 339 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCC---CCCCGGGSHHHHHHHHHHSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHhHHHHHHHHHHHHHhcccCCCCcCccccCHHHHHHHHHhCCCccEEEEEEeCCccccHHHHHHHHHHHHHHh
Confidence 99999999999999999999999865 899999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 002175 223 STVLSL 228 (956)
Q Consensus 223 ~I~~~~ 228 (956)
+|++.+
T Consensus 340 ~i~~~~ 345 (347)
T 1f9v_A 340 STRLVS 345 (347)
T ss_dssp CTTTC-
T ss_pred hhccCC
Confidence 987644
No 10
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.6e-53 Score=471.82 Aligned_cols=224 Identities=34% Similarity=0.448 Sum_probs=180.3
Q ss_pred CCCCC----CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCC----CCCceEeec----ccccc
Q 002175 1 MEGSS----HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTG----NGLAKIRLQ----SLESS 68 (956)
Q Consensus 1 M~Gs~----~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~----~~~~~v~~~----~~~~V 68 (956)
|+|++ +++|||||++++||+.+......+..|.|+|||+|||||+|||||.+.. .....++.+ ...+|
T Consensus 133 M~G~~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~l~ir~~~~~~~~~~v 212 (376)
T 2rep_A 133 MEGGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECEIRRAGPGSEELTV 212 (376)
T ss_dssp HTBCSSCCGGGBCHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEEEETTEEEETTCCC--------CCEEEC---CCCEEE
T ss_pred eecCCCCCcccCCcHHHHHHHHHHHHHHhhcCCeEEEEEEEEEEEECCEeeEccccccccccCCCceEEeccCCCCCEEE
Confidence 67764 4789999999999999986556678999999999999999999998752 122344444 23467
Q ss_pred cceeEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcc
Q 002175 69 IELVQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSG 144 (956)
Q Consensus 69 ~gLtev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G 144 (956)
.|++++.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|
T Consensus 213 ~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g 292 (376)
T 2rep_A 213 TNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALG 292 (376)
T ss_dssp TTCCCEEECSHHHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC---------
T ss_pred CCcEEEEeCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCCcEEEeEEEEEECCCCcccccccccC
Confidence 7999999999999999999999999999987 999999999999998877777788999999999999999999999
Q ss_pred ----hhhHhHHHHhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHH
Q 002175 145 ----ERITDVLHVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSR 220 (956)
Q Consensus 145 ----~rlkEa~~INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsr 220 (956)
.+++|+.+||+||++||+||.+|++++.||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|
T Consensus 293 ~~~~~rlkE~~~INkSL~aLg~vI~aL~~~~~hVPYRdSkLT~LLqdsLgGnskT~mIa~isP~~~~~~ETlsTLrfA~R 372 (376)
T 2rep_A 293 PGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASK 372 (376)
T ss_dssp ---------------CHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCCGGGHHHHHHHHHHHHH
T ss_pred ccccchhhHHhHhhHHHHHHHHHHHHHhcCCCccCCcCCHHHHHHHHhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccc
Q 002175 221 ARST 224 (956)
Q Consensus 221 AK~I 224 (956)
++++
T Consensus 373 v~~~ 376 (376)
T 2rep_A 373 VNQC 376 (376)
T ss_dssp HC--
T ss_pred HhcC
Confidence 9863
No 11
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=7.8e-53 Score=466.09 Aligned_cols=229 Identities=29% Similarity=0.362 Sum_probs=198.7
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC-CCceEeeccc--ccccceeEEEeC
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN-GLAKIRLQSL--ESSIELVQEKVD 77 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~-~~~~v~~~~~--~~V~gLtev~V~ 77 (956)
|+|+++++|||||++++||+.+.. .++..|.|+|||+|||||+|||||.+... ....++.+.. .+|.|++++.|.
T Consensus 95 M~G~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~ed~~~~~~v~gl~~~~v~ 172 (349)
T 1t5c_A 95 MMGSEDHLGVIPRAIHDIFQKIKK--FPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVY 172 (349)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHGGG--CTTEEEEEEEEEEEEETTEEEESSSSSCTTCCEEEEETTTTEEEETTCCCEECS
T ss_pred EecCCCCCchHHHHHHHHHHHHHh--CcCCcEEEEEEEEEEeCCEEEEccCCCCCCCCceEEECCCCCEEecCCEEEEeC
Confidence 789999999999999999999975 46789999999999999999999987543 3446666554 356799999999
Q ss_pred CHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCC-----CceeeeeeEEeeccCCCccccCCCcchhhH
Q 002175 78 NPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLIT-----GENLYSKLSLVDLAGSEGLIAEDDSGERIT 148 (956)
Q Consensus 78 S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~-----~~~~~SkLsfVDLAGSER~~kt~s~G~rlk 148 (956)
|++|++.+|..|.++|++++|. |||||+||+|+|.+.+... +....|+|+|||||||||..++++.|.+++
T Consensus 173 s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~ 252 (349)
T 1t5c_A 173 TSEMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLK 252 (349)
T ss_dssp SHHHHHHHHHHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCC
T ss_pred CHHHHHHHHHHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCccccch
Confidence 9999999999999999999997 9999999999999876532 345789999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHhhcCC--CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccccc
Q 002175 149 DVLHVMKSLSALGDVLSSLTSRK--DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVL 226 (956)
Q Consensus 149 Ea~~INkSL~aLg~VI~aLs~k~--~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~ 226 (956)
|+.+||+||++||+||.+|++++ .||||||||||+||+|+|||||+|+||+||||. +++||++||+||+||++|++
T Consensus 253 E~~~INkSL~aLg~vI~aL~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~--~~~ETlsTL~fA~rak~I~n 330 (349)
T 1t5c_A 253 EGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKN 330 (349)
T ss_dssp SSSCCCHHHHHHHHHHHHHHHTCCTTSSCGGGSHHHHHTGGGTTSSSEEEEEEEECTT--CSHHHHHHHHHHHHHTTCCC
T ss_pred hhhHHhHHHHHHHHHHHHHhccCCCCCCcccccHHHHHHHHhcCCCceEEEEEEeCCC--CHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999865 699999999999999999999999999999997 69999999999999999988
Q ss_pred ccCccch
Q 002175 227 SLGNRDT 233 (956)
Q Consensus 227 ~~~n~~~ 233 (956)
.+..+..
T Consensus 331 ~~~vn~~ 337 (349)
T 1t5c_A 331 TPYVNEV 337 (349)
T ss_dssp CCCCCEE
T ss_pred CceeccC
Confidence 7655443
No 12
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=3.3e-53 Score=472.73 Aligned_cols=224 Identities=29% Similarity=0.403 Sum_probs=183.0
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeecc----cccccceeEEEeCCHHH
Q 002175 6 HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQS----LESSIELVQEKVDNPLE 81 (956)
Q Consensus 6 ~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~----~~~V~gLtev~V~S~eE 81 (956)
.++|||||++++||+.+.. ...+|.|+|||+|||||+|||||.+.......+..+. ..+|.|++++.|.|++|
T Consensus 134 ~~~Giipr~~~~lF~~i~~---~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~~~~~~~g~v~v~gl~~~~V~s~~e 210 (373)
T 2wbe_C 134 SDIGIIPRALSHLFDELRM---MEVEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSKDD 210 (373)
T ss_dssp TTBCHHHHHHHHHHHHHHH---CCSCEEEEEEEEEEETTEEEESSCTTSCSCCCEEECSSSSSCEEETTCCCEEESSHHH
T ss_pred CCCcChHHHHHHHHHHHHh---cCceEEEEEEEEEEeCCeEEECCCCCCCCCceeEeccCCCCcEEecCceEEccCCHHH
Confidence 3789999999999999975 3468999999999999999999988655444555442 24677999999999999
Q ss_pred HHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC-C--CceeeeeeEEeeccCCCccccCCCc-chhhHhHHHH
Q 002175 82 FSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI-T--GENLYSKLSLVDLAGSEGLIAEDDS-GERITDVLHV 153 (956)
Q Consensus 82 ~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~-~--~~~~~SkLsfVDLAGSER~~kt~s~-G~rlkEa~~I 153 (956)
++.+|..|.++|++++|. |||||+||+|+|.+.... + .....|+|+|||||||||..++++. |.+++|+.+|
T Consensus 211 ~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl~E~~~I 290 (373)
T 2wbe_C 211 VYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNI 290 (373)
T ss_dssp HHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC--------------------
T ss_pred HHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccccchhHHHHH
Confidence 999999999999999998 999999999999986532 2 2246799999999999999999987 9999999999
Q ss_pred hhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccCccc
Q 002175 154 MKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNRD 232 (956)
Q Consensus 154 NkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~n~~ 232 (956)
|+||++||+||.+|.++..|||||+||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|++.+..+.
T Consensus 291 NkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~I~n~p~vN~ 369 (373)
T 2wbe_C 291 NQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQ 369 (373)
T ss_dssp CHHHHHHHHHHHHHHHCSSCCCGGGCHHHHHTHHHHHSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEECCCCCE
T ss_pred HHHHHHHHHHHHHHHcCCCcCccccchHHHHHHHHhCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccccceecc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988766554
No 13
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=1.1e-52 Score=477.51 Aligned_cols=230 Identities=32% Similarity=0.435 Sum_probs=188.1
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCC--CCCceEEEEEEEEEEEcCcccccCCcCC----CCCceEeeccc--cccccee
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDT--TATARFNFAVTVFELYNEQLRELLPQTG----NGLAKIRLQSL--ESSIELV 72 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~--~~~~~fsVsVSylEIYNE~V~DLL~~~~----~~~~~v~~~~~--~~V~gLt 72 (956)
|+|+++++|||||++++||+.|.... .++.+|.|+|||+|||||+|||||.+.. .....++.+.. .+|.|++
T Consensus 154 M~G~~~~~GIipr~~~~lF~~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~~~~~~~l~ire~~~~g~~V~gl~ 233 (443)
T 2owm_A 154 MMGTPDQPGLIPRTCEDLFQRIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVPNKPPYYLKVRESPTEGPYVKDLT 233 (443)
T ss_dssp HTCCTTSCCHHHHHHHHHHHHHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCSSCCCCCCEEEEETTTEEEEETCC
T ss_pred eecCCCCCchHHHHHHHHHHHHHhhhcccCCceEEEEEEEEEEECCEeeEccCccccCCcccccceeECCCCCEeccCCE
Confidence 78999999999999999999997642 3578999999999999999999998732 22345666544 4577999
Q ss_pred EEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC----CCceeeeeeEEeeccCCCccccCCCcc
Q 002175 73 QEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI----TGENLYSKLSLVDLAGSEGLIAEDDSG 144 (956)
Q Consensus 73 ev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~----~~~~~~SkLsfVDLAGSER~~kt~s~G 144 (956)
++.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.... ......|+|+|||||||||..++++.|
T Consensus 234 e~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g 313 (443)
T 2owm_A 234 EVPVRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATG 313 (443)
T ss_dssp CEECCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC--------
T ss_pred EEEcCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccccccCCcc
Confidence 999999999999999999999999997 999999999999986432 234567999999999999999999999
Q ss_pred hhhHhHHHHhhhHHHHHHHHHHhhcCC----------------------CCcCCCCCchhhhhccccCCCCeEEEEEeeC
Q 002175 145 ERITDVLHVMKSLSALGDVLSSLTSRK----------------------DIVPYENSMLTKVLADSLGESSKTLMIVNIC 202 (956)
Q Consensus 145 ~rlkEa~~INkSL~aLg~VI~aLs~k~----------------------~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VS 202 (956)
.+++|+.+||+||++||+||.+|++++ .||||||||||+||+|+|||||+|+||+|||
T Consensus 314 ~rlkE~~~INkSL~aLg~vI~aL~~~~~~~~~~~~~~~~g~~~~~~~~~~hVPYRdSkLTrLLqdsLgGnskT~mIa~iS 393 (443)
T 2owm_A 314 QRLREGSNINKSLTTLGRVIAALADPKSSASRPSSPVKSGRGRTPGPANSVVPYRDSVLTWLLKDSLGGNSKTAMIACIS 393 (443)
T ss_dssp ------CCSSHHHHHHHHHHHHHCC-------------------------CCCGGGSHHHHHSTTTTTSSCEEEEEEEEC
T ss_pred ccccchhhhcHHHHHHHHHHHHHhcccccccccccccccccccccccCCCcccCcccHhHHHHHHhhCCCCcEEEEEEec
Confidence 999999999999999999999998743 3899999999999999999999999999999
Q ss_pred CCCCCHHHhHHHHHHHHHhcccccccCccc
Q 002175 203 PNAANMSETLSSLNFSSRARSTVLSLGNRD 232 (956)
Q Consensus 203 Ps~~~~eETLsTLrFAsrAK~I~~~~~n~~ 232 (956)
|+ +|+||++||+||++|++|++.+..+.
T Consensus 394 P~--~~~ETlsTLrfA~rak~I~n~~~vN~ 421 (443)
T 2owm_A 394 PT--DYDETLSTLRYADQAKRIRTRAVVNQ 421 (443)
T ss_dssp SS--CHHHHHHHHHHHHHHTTCEECCCCCC
T ss_pred cc--cHHHHHHHHHHHHHHhhccccceecc
Confidence 96 69999999999999999987765543
No 14
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=5.7e-53 Score=467.21 Aligned_cols=224 Identities=33% Similarity=0.468 Sum_probs=185.4
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC----------CCceEeecc---ccc
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN----------GLAKIRLQS---LES 67 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~----------~~~~v~~~~---~~~ 67 (956)
|+|+ ++|||||++++||+.+......+.+|.|+|||+|||||+|||||.+... ....++.++ ..+
T Consensus 103 m~g~--~~Giipr~~~~lF~~~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 180 (349)
T 3t0q_A 103 MLNA--GDGMIPMTLSHIFKWTANLKERGWNYEMECEYIEIYNETILDLLRDFKSHDNIDEILDSQKHDIRHDHEKQGTY 180 (349)
T ss_dssp HHST--TTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTC---------------CCCEEEETTTTEEE
T ss_pred eCCC--CCchhhHHHHHHHHHHHHhhhcCceeEEEEEEEEEEcchhhccccccccccccccccccccceeEEecCCCCEE
Confidence 4554 5699999999999999875566789999999999999999999987431 222344332 246
Q ss_pred ccceeEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCc
Q 002175 68 SIELVQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDS 143 (956)
Q Consensus 68 V~gLtev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~ 143 (956)
|.|++++.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.
T Consensus 181 v~~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~ 260 (349)
T 3t0q_A 181 ITNVTRMKMTSTSQVDTILKKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTGETSQGKLNLVDLAGSERINSSAVT 260 (349)
T ss_dssp ETTCCCEECCCHHHHHHHHHHC------------CTGGGSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCC----C
T ss_pred EeCCEEEEeCCHHHHHHHHHHHHHhCcccccccccccCCcceEEEEEEEEEecCCCCeeEEEEEEEeCCCCCccccccCc
Confidence 77999999999999999999999999999987 99999999999999988888888999999999999999999999
Q ss_pred chhhHhHHHHhhhHHHHHHHHHHhhcCC---CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHH
Q 002175 144 GERITDVLHVMKSLSALGDVLSSLTSRK---DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSR 220 (956)
Q Consensus 144 G~rlkEa~~INkSL~aLg~VI~aLs~k~---~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsr 220 (956)
|.+++|+.+||+||++||+||.+|.+++ .||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|
T Consensus 261 g~rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~r 340 (349)
T 3t0q_A 261 GERLRETQNINKSLSCLGDVIYALNTPDAGKRYIPFRNSKLTYLLQYSLVGDSKTLMFVNIPPDPNHISETLNSLRFASK 340 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCCCGGGSHHHHHHGGGSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHH
T ss_pred cccchhHHhhhHhHHHHHHHHHHHhcccCCCCcCCCcCCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHH
Confidence 9999999999999999999999998765 4999999999999999999999999999999999999999999999999
Q ss_pred hccccc
Q 002175 221 ARSTVL 226 (956)
Q Consensus 221 AK~I~~ 226 (956)
++.|++
T Consensus 341 v~~ik~ 346 (349)
T 3t0q_A 341 VNSTKI 346 (349)
T ss_dssp HHC---
T ss_pred hhhccc
Confidence 999875
No 15
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=5.7e-53 Score=468.17 Aligned_cols=221 Identities=28% Similarity=0.429 Sum_probs=177.4
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEEeCC
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEKVDN 78 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~V~S 78 (956)
|+|+++++|||||++++||+.+... .....|.|+|||+|||||+|||||.+.. ...++.+.. .+|.|++++.|.|
T Consensus 123 m~G~~~~~Giipr~~~~lf~~i~~~-~~~~~~~v~vS~~EIYnE~i~DLL~~~~--~l~ire~~~~~~~v~gl~~~~v~s 199 (355)
T 3lre_A 123 MLGSADEPGVMYLTMLHLYKCMDEI-KEEKICSTAVSYLEVYNEQIRDLLVNSG--PLAVREDTQKGVVVHGLTLHQPKS 199 (355)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHHHHT-TTTEEEEEEEEEEEEETTEEEESSSCCC--CBEEEECTTSCEEEETCCCBCCCS
T ss_pred eccCCCCCCeeehhhhHHHHhhhhh-ccCceEEEEEEEEEEECCEEEECcCCCC--CceeEEcCCCCEEeeeeeEEecCC
Confidence 7899999999999999999999864 4567899999999999999999998743 346666554 4567999999999
Q ss_pred HHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCC---CceeeeeeEEeeccCCCccccCCCcchhhHhHH
Q 002175 79 PLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLIT---GENLYSKLSLVDLAGSEGLIAEDDSGERITDVL 151 (956)
Q Consensus 79 ~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~---~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~ 151 (956)
++|++.+|..|.++|++++|. |||||+||+|+|.+.+... .....|+|+|||||||||..++++.|.+++|+.
T Consensus 200 ~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~ 279 (355)
T 3lre_A 200 SEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGT 279 (355)
T ss_dssp HHHHHHHHHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC---------------
T ss_pred HHHHHHHHHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHH
Confidence 999999999999999999987 9999999999999976532 335679999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHHHhhcCC---CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccc
Q 002175 152 HVMKSLSALGDVLSSLTSRK---DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARST 224 (956)
Q Consensus 152 ~INkSL~aLg~VI~aLs~k~---~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I 224 (956)
+||+||++||+||.+|++++ .||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 280 ~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~lL~dsLgGnskt~mIa~isP~~~~~~ETl~TL~fA~rak~I 355 (355)
T 3lre_A 280 NINRSLLALGNVINALADSKRKNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355 (355)
T ss_dssp --CHHHHHHHHHHHHHC--------CCGGGSHHHHHTTTTSSTTSEEEEEEEECCBGGGHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCcCCcccCHHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 99999999999999998743 59999999999999999999999999999999999999999999999999975
No 16
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=6e-53 Score=467.83 Aligned_cols=223 Identities=33% Similarity=0.490 Sum_probs=184.5
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC-CCceEeeccc--ccccceeEEEeC
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN-GLAKIRLQSL--ESSIELVQEKVD 77 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~-~~~~v~~~~~--~~V~gLtev~V~ 77 (956)
|+|+.+++|||||++++||..+......+..|.|+|||+|||||+|||||++... ....++.+.. .+|.|++++.|.
T Consensus 110 m~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~g~~v~gl~~~~v~ 189 (354)
T 3gbj_A 110 MMGTADQPGLIPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGLSKLAVT 189 (354)
T ss_dssp HTBCSSSBCHHHHHHHHHHHHHHHHCBTTEEEEEEEEEEEEETTEEEETTC------CBCBC------CCBTTCCCEEEC
T ss_pred EecCCCCCchhhHHHHHHHHHHHhhcccccceeeeceeEEEecCeeeEccCCCCCCcceEEEEcCCCCEEEEeeEEEecC
Confidence 7899999999999999999999765567789999999999999999999988542 3344555443 467799999999
Q ss_pred CHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC----CCceeeeeeEEeeccCCCccccCCCcchhhHh
Q 002175 78 NPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI----TGENLYSKLSLVDLAGSEGLIAEDDSGERITD 149 (956)
Q Consensus 78 S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~----~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkE 149 (956)
|++|++.+|..|.++|++++|. |||||+||+|+|.+.... ......|+|+|||||||||..++++.|.+++|
T Consensus 190 s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E 269 (354)
T 3gbj_A 190 SYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKE 269 (354)
T ss_dssp SHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC------CH
T ss_pred CHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchh
Confidence 9999999999999999999987 999999999999886322 22346799999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHhhc------CCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcc
Q 002175 150 VLHVMKSLSALGDVLSSLTS------RKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARS 223 (956)
Q Consensus 150 a~~INkSL~aLg~VI~aLs~------k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~ 223 (956)
+.+||+||++||+||.+|++ +..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||.+|+.
T Consensus 270 ~~~IN~SL~aLg~vI~aL~~~~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLr~a~~~~~ 349 (354)
T 3gbj_A 270 GSNINKSLTTLGLVISALADQSAGKNKNKFVPYRDSVLTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKH 349 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC------CCCCCGGGSHHHHHTHHHHSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHC-
T ss_pred HHHhhHHHHHHHHHHHHHHhhhcccCCCCcccccccHHHHHHHHHhCCCCeEEEEEEeCCCcchHHHHHHHHHHHHHhhh
Confidence 99999999999999999985 457999999999999999999999999999999999999999999999999985
No 17
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=9.1e-53 Score=468.71 Aligned_cols=229 Identities=30% Similarity=0.449 Sum_probs=195.0
Q ss_pred CCCCC---CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEE
Q 002175 1 MEGSS---HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEK 75 (956)
Q Consensus 1 M~Gs~---~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~ 75 (956)
|+|+. +++|||||++++||..+.. .++.+|.|+|||+|||||+|||||.+.......++.+.. .+|.|++++.
T Consensus 119 M~G~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~l~i~e~~~~~v~v~gl~~~~ 196 (372)
T 3b6u_A 119 MEGIRGDPEKRGVIPNSFDHIFTHISR--SQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELKERPDTGVYVKDLSSFV 196 (372)
T ss_dssp HTBCTTSGGGBCHHHHHHHHHHHHHHT--CSSCEEEEEEEEEEEETTEEEETTSSCTTCCBCEEEETTTEEEETTCCCEE
T ss_pred EecCCCCcccCCcHHHHHHHHHHHhhh--ccCCceEEEEEEEEEeCCEEEECCCCCCCCCceEEECCCCcEecCCCEEEE
Confidence 66754 5679999999999999975 567899999999999999999999987655566666554 4577999999
Q ss_pred eCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC---CCceeeeeeEEeeccCCCccccCCCcchhhH
Q 002175 76 VDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI---TGENLYSKLSLVDLAGSEGLIAEDDSGERIT 148 (956)
Q Consensus 76 V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~---~~~~~~SkLsfVDLAGSER~~kt~s~G~rlk 148 (956)
|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+.. ......|+|+|||||||||..++++.|.+++
T Consensus 197 v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~ 276 (372)
T 3b6u_A 197 TKSVKEIEHVMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLK 276 (372)
T ss_dssp CCSHHHHHHHHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCCE----------EE
T ss_pred ecCHHHHHHHHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCccccccCcchhhhh
Confidence 999999999999999999999998 999999999999987642 2345679999999999999999999999999
Q ss_pred hHHHHhhhHHHHHHHHHHhhcCC-CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccc
Q 002175 149 DVLHVMKSLSALGDVLSSLTSRK-DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLS 227 (956)
Q Consensus 149 Ea~~INkSL~aLg~VI~aLs~k~-~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~ 227 (956)
|+.+||+||++||+||.+|++++ .||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+||++|++.
T Consensus 277 E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETlsTLrfA~rak~I~n~ 356 (372)
T 3b6u_A 277 EATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNK 356 (372)
T ss_dssp EGGGCCHHHHHHHHHHHHHHCC---CCCGGGSHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCBCC
T ss_pred hHhhhhhhHHHHHHHHHHHhcCCCCCCcccccHHHHHHHHhcCCCccEEEEEEeCCcccCHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999865 69999999999999999999999999999999999999999999999999998877
Q ss_pred cCcc
Q 002175 228 LGNR 231 (956)
Q Consensus 228 ~~n~ 231 (956)
+..+
T Consensus 357 ~~~n 360 (372)
T 3b6u_A 357 PRVN 360 (372)
T ss_dssp CCCC
T ss_pred ceec
Confidence 6544
No 18
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=5.1e-53 Score=469.18 Aligned_cols=220 Identities=29% Similarity=0.409 Sum_probs=183.2
Q ss_pred CCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC--CCceEeecc----cccccceeEEEeCCHH
Q 002175 7 DRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN--GLAKIRLQS----LESSIELVQEKVDNPL 80 (956)
Q Consensus 7 d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~--~~~~v~~~~----~~~V~gLtev~V~S~e 80 (956)
.+|||||++++||+.+.. .+.+|.|+|||+|||||+|||||.+... ....+..+. ..+|.|++++.|.|++
T Consensus 123 ~~Giipr~~~~lF~~i~~---~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~l~i~~~~~~~~~v~v~gl~~~~v~s~~ 199 (359)
T 1x88_A 123 LAGIIPRTLHQIFEKLTD---NGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKD 199 (359)
T ss_dssp TBCHHHHHHHHHHHHTSS---SSEEEEEEEEEEEEETTEEEETTCTTSCTTCCBEEEEETTEEEEEEEETCCCEEECSGG
T ss_pred cCCchHHHHHHHHHHHhc---cCceEEEEEEEEEEeCceeeehhcccccccccceEEeccCCCCCEEEcCCEEEEcCCHH
Confidence 379999999999999863 5689999999999999999999988654 234555543 2457799999999999
Q ss_pred HHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC-CC--ceeeeeeEEeeccCCCccccCCCcchhhHhHHHH
Q 002175 81 EFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI-TG--ENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHV 153 (956)
Q Consensus 81 E~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~-~~--~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~I 153 (956)
|++.+|..|.++|++++|. |||||+||+|+|.+.+.. ++ ....|+|+|||||||||..++++.|.+++|+.+|
T Consensus 200 e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~I 279 (359)
T 1x88_A 200 EVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNI 279 (359)
T ss_dssp GHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC---------------CC
T ss_pred HHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCCcccccCCcccchHHHhhh
Confidence 9999999999999998886 999999999999876532 22 2457999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccC
Q 002175 154 MKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLG 229 (956)
Q Consensus 154 NkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~ 229 (956)
|+||++||+||.+|.++..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|++.+.
T Consensus 280 NkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~vsP~~~~~~ETl~TLrfA~rak~I~n~p~ 355 (359)
T 1x88_A 280 NQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPE 355 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGSSSSSEEEEEEEECCCGGGHHHHHHHHHHHHHHTTCCCCCC
T ss_pred hHHHHHHHHHHHHHhcCCCCCccccchHHHHHHHHhCCCCeEEEEEEECCCcccHHHHHHHHHHHHHHhhccCcce
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999877654
No 19
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-52 Score=468.60 Aligned_cols=226 Identities=34% Similarity=0.463 Sum_probs=194.6
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC--------CCceEeecc---ccccc
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN--------GLAKIRLQS---LESSI 69 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~--------~~~~v~~~~---~~~V~ 69 (956)
|+|+ ++|||||++++||+.+......+.+|.|+|||+|||||+|||||.+... ....+..++ ..+|.
T Consensus 158 M~g~--~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~i~~~~~~~~~~v~ 235 (403)
T 4etp_A 158 MLNP--GDGIIPSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIGLKHEIRHDQETKTTTIT 235 (403)
T ss_dssp HHCT--TTSHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEEETTEEEETTCC--------CCSCCCCEEEETTTTEEEET
T ss_pred eCCC--CCccchhHHHHHHHHHHhhhccCceEEEEEEEEEEecceeeEccCCccccccccccCcceeeEEeCCCCCEEec
Confidence 4554 5699999999999999875567789999999999999999999987542 122333332 24677
Q ss_pred ceeEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcch
Q 002175 70 ELVQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGE 145 (956)
Q Consensus 70 gLtev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~ 145 (956)
|++++.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.
T Consensus 236 ~l~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~ 315 (403)
T 4etp_A 236 NVTSVKLESEEMVEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGD 315 (403)
T ss_dssp TCCCEECCCHHHHHHHHHHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHH
T ss_pred CcEEEEeCCHHHHHHHHHHHHHhcccccccCCcccCCcccEEEEEEEEeecCCCCeeEEEEEEEECCCCccccccCChhH
Confidence 999999999999999999999999999998 9999999999999998888888899999999999999999999999
Q ss_pred hhHhHHHHhhhHHHHHHHHHHhhcCC---CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhc
Q 002175 146 RITDVLHVMKSLSALGDVLSSLTSRK---DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRAR 222 (956)
Q Consensus 146 rlkEa~~INkSL~aLg~VI~aLs~k~---~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK 222 (956)
+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|++
T Consensus 316 rl~E~~~INkSL~aLg~vI~aL~~~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mi~~vsP~~~~~~ETl~TL~fA~rv~ 395 (403)
T 4etp_A 316 RLRETQNINKSLSALGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVN 395 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSCTTTSCCCGGGSHHHHHTGGGTSTTCEEEEEEEECCSGGGHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCcCCcccchHHHHHHHhcCCCceEEEEEEeCCchhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999998755 499999999999999999999999999999999999999999999999999
Q ss_pred cccccc
Q 002175 223 STVLSL 228 (956)
Q Consensus 223 ~I~~~~ 228 (956)
.|++.+
T Consensus 396 ~~~~~~ 401 (403)
T 4etp_A 396 STRLVS 401 (403)
T ss_dssp CC----
T ss_pred hcccCC
Confidence 987643
No 20
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=4.4e-52 Score=459.38 Aligned_cols=220 Identities=29% Similarity=0.468 Sum_probs=178.1
Q ss_pred CCCC------CCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCC-CCCceEeeccc--ccccce
Q 002175 1 MEGS------SHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTG-NGLAKIRLQSL--ESSIEL 71 (956)
Q Consensus 1 M~Gs------~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~-~~~~~v~~~~~--~~V~gL 71 (956)
|+|+ .+++|||||++++||+.++. .+..+|.|+|||+|||||+|||||++.. .....++.+.. .+|.|+
T Consensus 101 m~G~~~~~~~~~~~Giipr~~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~l~i~e~~~~~~~v~gl 178 (344)
T 4a14_A 101 MGEASVASLLEDEQGIVPRAMAEAFKLIDE--NDLLDCLVHVSYLEVYKEEFRDLLEVGTASRDIQLREDERGNVVLCGV 178 (344)
T ss_dssp HCC--------CCCCHHHHHHHHHHHHHHH--CTTSEEEEEEEEEEEETTEEEETTSSCCCGGGCEEEECTTSCEEEESC
T ss_pred ecccchhhhhhcccCCchHHHHHHHHhccc--ccceeeEEEEehhhhhHHHHHHHHHhccccccceeeeccCCCEEEEee
Confidence 5676 47899999999999999986 4668999999999999999999998643 23345666554 356799
Q ss_pred eEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC--------CCceeeeeeEEeeccCCCcccc
Q 002175 72 VQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI--------TGENLYSKLSLVDLAGSEGLIA 139 (956)
Q Consensus 72 tev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~--------~~~~~~SkLsfVDLAGSER~~k 139 (956)
+++.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+.+.. .+....|+|+|||||||||..+
T Consensus 179 ~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~ 258 (344)
T 4a14_A 179 KEVDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLK 258 (344)
T ss_dssp CCEECCSHHHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC--
T ss_pred eeccccCHHHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcc
Confidence 9999999999999999999999999987 999999999999987532 2345679999999999999999
Q ss_pred CCCcchhhHhHHHHhhhHHHHHHHHHHhhcC---CCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHH
Q 002175 140 EDDSGERITDVLHVMKSLSALGDVLSSLTSR---KDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLN 216 (956)
Q Consensus 140 t~s~G~rlkEa~~INkSL~aLg~VI~aLs~k---~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLr 216 (956)
+++.|.+++|+.+||+||++||+||.+|+++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+
T Consensus 259 t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~vsP~~~~~~ETl~TL~ 338 (344)
T 4a14_A 259 TGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLN 338 (344)
T ss_dssp ------------CCCSHHHHHHHHHHHHTCTTTTTSCCCGGGCHHHHHTTTSSSTTSEEEEEEEECCBGGGHHHHHHHHH
T ss_pred cCCchhhhhhheeechhHHhhhhHHHhcCCccccCCCCCcchhhHHHHhHhhcCCCcceEEEEEeCCCccchhHHhhhhh
Confidence 9999999999999999999999999999874 3699999999999999999999999999999999999999999999
Q ss_pred HHHHhc
Q 002175 217 FSSRAR 222 (956)
Q Consensus 217 FAsrAK 222 (956)
||+|||
T Consensus 339 fA~rAk 344 (344)
T 4a14_A 339 YASRAQ 344 (344)
T ss_dssp HHHHTC
T ss_pred hhhhcC
Confidence 999996
No 21
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=8.9e-52 Score=459.24 Aligned_cols=219 Identities=26% Similarity=0.304 Sum_probs=189.0
Q ss_pred CCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeecc--cccccceeEEEeCCHHHH
Q 002175 5 SHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQS--LESSIELVQEKVDNPLEF 82 (956)
Q Consensus 5 ~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~--~~~V~gLtev~V~S~eE~ 82 (956)
.+++|||||++++||..++.. ..+..|.|+|||+|||||+|||||.+... ..+..+. ..++.|++++.|.|++|+
T Consensus 111 ~~~~Giipr~~~~lF~~i~~~-~~~~~~~v~vS~~EIYnE~v~DLL~~~~~--~~~~e~~~~~~~v~gl~~~~V~s~~e~ 187 (360)
T 1ry6_A 111 SDTPGIFQYAAGDIFTFLNIY-DKDNTKGIFISFYEIYCGKLYDLLQKRKM--VAALENGKKEVVVKDLKILRVLTKEEL 187 (360)
T ss_dssp SSCBCHHHHHHHHHHHHHHHH-CSSSCEEEEEEEEEEETTEEEESCCC-------------CCBCGGGSCCEEECSHHHH
T ss_pred ccCCCcHHHHHHHHHHHHHhh-ccCCceEEEEEEEEeeCCeeEEcccCCcc--ceeeEcCCCCEEEcCcEEEEeCCHHHH
Confidence 478999999999999999753 35578999999999999999999987543 2233332 356779999999999999
Q ss_pred HHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcc-hhhHhHHHHhhhH
Q 002175 83 SKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSG-ERITDVLHVMKSL 157 (956)
Q Consensus 83 l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G-~rlkEa~~INkSL 157 (956)
+.+|..|.++|++++|. |||||+||+|+|.+.+ .....|+|+|||||||||..++++.| .+++|+.+||+||
T Consensus 188 ~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~---~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkSL 264 (360)
T 1ry6_A 188 ILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDIN---KNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRSL 264 (360)
T ss_dssp HHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETT---TTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhcccccccCCCccceEEEEEEEEecc---CCcceeEEEEEECCCCccccccccccccchHHHHHHHHHH
Confidence 99999999999999887 9999999999998754 34568999999999999999998876 5789999999999
Q ss_pred HHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccC
Q 002175 158 SALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLG 229 (956)
Q Consensus 158 ~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~ 229 (956)
++||+||.+|.+++.||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|++.+.
T Consensus 265 ~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~rak~i~n~~~ 336 (360)
T 1ry6_A 265 LALKECIRAMDSDKNHIPFRDSELTKVLRDIFVGKSKSIMIANISPTISCCEQTLNTLRYSSRVKNKGNSKL 336 (360)
T ss_dssp HHHHHHHHHHTTSTTSCCGGGCHHHHHTGGGGSSSCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHhcCCCCCccccCHHHHHHHHHhCCCCeEEEEEEeCCCcccHHHHHHHHHHHHHHhhcccCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999887543
No 22
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=3.3e-52 Score=462.35 Aligned_cols=222 Identities=28% Similarity=0.369 Sum_probs=177.8
Q ss_pred CCCCCCC---CChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC-----CCceEeeccc-ccccce
Q 002175 1 MEGSSHD---RGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN-----GLAKIRLQSL-ESSIEL 71 (956)
Q Consensus 1 M~Gs~~d---~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~-----~~~~v~~~~~-~~V~gL 71 (956)
|+|++++ +|||||++++||+.++. ..+..|.|+|||+|||||+|||||.+.+. ....+..+.. .+|.|+
T Consensus 121 M~G~~~~~~~~Giipra~~~lF~~i~~--~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~l~i~e~~~g~~v~gl 198 (358)
T 2nr8_A 121 MMGATENYKHRGILPRALQQVFRMIEE--RPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENPQGVFIKGL 198 (358)
T ss_dssp HTBCSSCGGGBCHHHHHHHHHHHHHHT--CTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEETTEEEEETC
T ss_pred ecccccccccCCcHHHHHHHHHHHHhh--cCCceEEEEEEEEEEeCCeeeECcCCccccCccCCceEEEECCCceEecCC
Confidence 7787764 89999999999999985 45678999999999999999999987432 2234444443 457799
Q ss_pred eEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC--CCceeeeeeEEeeccCCCccccCCCcch
Q 002175 72 VQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI--TGENLYSKLSLVDLAGSEGLIAEDDSGE 145 (956)
Q Consensus 72 tev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~--~~~~~~SkLsfVDLAGSER~~kt~s~G~ 145 (956)
+++.|.+.+|++.+|..|.++|++++|. |||||+||+|+|.+.+.. ......|+|+|||||||||..++++.|.
T Consensus 199 ~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~ 278 (358)
T 2nr8_A 199 SVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQ 278 (358)
T ss_dssp CCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------
T ss_pred EEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccCCCCCEEEEEEEEEECCCCCcccccCCchh
Confidence 9999999999999999999999999886 999999999999987543 3345679999999999999999999999
Q ss_pred hhHhHHHHhhhHHHHHHHHHHhhcC-CCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccc
Q 002175 146 RITDVLHVMKSLSALGDVLSSLTSR-KDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARST 224 (956)
Q Consensus 146 rlkEa~~INkSL~aLg~VI~aLs~k-~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I 224 (956)
+++|+.+||+||++||+||.+|+++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||.|
T Consensus 279 rl~E~~~INkSL~aLg~vI~aL~~~~~~hiPyRdSkLT~LLqdsLgGnskt~mIa~isP~~~~~~ETlsTLrfA~Rak~I 358 (358)
T 2nr8_A 279 VLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 358 (358)
T ss_dssp ------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCccCHHHHHHHHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 9999999999999999999999875 479999999999999999999999999999999999999999999999999975
No 23
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.4e-52 Score=462.42 Aligned_cols=222 Identities=28% Similarity=0.367 Sum_probs=176.8
Q ss_pred CCCCC---CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCC-----CCceEeeccc-ccccce
Q 002175 1 MEGSS---HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGN-----GLAKIRLQSL-ESSIEL 71 (956)
Q Consensus 1 M~Gs~---~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~-----~~~~v~~~~~-~~V~gL 71 (956)
|+|+. +++|||||++++||+.+.. .++..|.|+|||+|||||+|||||++... ....+..+.. .++.|+
T Consensus 122 M~G~~~~~~~~Giipra~~~lF~~~~~--~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~~~~~~~~~~~~~g~~v~~l 199 (359)
T 3nwn_A 122 MMGATENYKHRGILPRALQQVFRMIEE--RPTHAITVRVSYLEIYNESLFDLLSTLPYVGPSVTPMTIVENPQGVFIKGL 199 (359)
T ss_dssp HTBCSSCGGGBCHHHHHHHHHHHHHHT--CTTSCEEEEEEEEEEETTEEEETTSSSTTSCTTTSCCEEEEETTEEEEETC
T ss_pred eCCccCCccchhhHHHHHHHHHHHhhc--CCCCcEEEEEEEEEEeccccccccccccccccccccceEEecCCceEEecc
Confidence 67865 4589999999999999875 56678999999999999999999986432 2223444443 456799
Q ss_pred eEEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccC--CCceeeeeeEEeeccCCCccccCCCcch
Q 002175 72 VQEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLI--TGENLYSKLSLVDLAGSEGLIAEDDSGE 145 (956)
Q Consensus 72 tev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~--~~~~~~SkLsfVDLAGSER~~kt~s~G~ 145 (956)
+++.|.+++|++.++..|.++|.+++|. |||||+||+|+|.+.... ......|+|+|||||||||+.++++.|.
T Consensus 200 ~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~ 279 (359)
T 3nwn_A 200 SVHLTSQEEDAFSLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQ 279 (359)
T ss_dssp CCEECSSHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------
T ss_pred EEEEecCHHHHHHHHHhhhhhcccccccCccccCcceEEEEEEEEeecccccCcccccccceeeeccccccccccCCchh
Confidence 9999999999999999999999999886 999999999999886543 3345679999999999999999999999
Q ss_pred hhHhHHHHhhhHHHHHHHHHHhhcC-CCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccc
Q 002175 146 RITDVLHVMKSLSALGDVLSSLTSR-KDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARST 224 (956)
Q Consensus 146 rlkEa~~INkSL~aLg~VI~aLs~k-~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I 224 (956)
+++|+.+||+||++||+||.+|+++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 280 rl~E~~~IN~SL~~Lg~vI~aL~~~~~~hVPYRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ETlsTL~fA~rak~I 359 (359)
T 3nwn_A 280 VLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRMKLV 359 (359)
T ss_dssp ------CCSTHHHHHHHHHHHHHC-----CCGGGSHHHHHTHHHHSSSSEEEEEEEECCSGGGHHHHHHHHHHHTTGGGC
T ss_pred HHHhhhhhcccHHHHHHHHHHHHhcCCCcCCcccCHHHHHHHHhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999974 579999999999999999999999999999999999999999999999999975
No 24
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=1.5e-51 Score=464.31 Aligned_cols=224 Identities=28% Similarity=0.416 Sum_probs=190.0
Q ss_pred CCCCCCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCc-eEeecc--cccccceeEEEeC
Q 002175 1 MEGSSHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLA-KIRLQS--LESSIELVQEKVD 77 (956)
Q Consensus 1 M~Gs~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~-~v~~~~--~~~V~gLtev~V~ 77 (956)
|+|+++++|||||++++||+.|......+.+|.|+|||+|||||+|||||.+...... .+..++ ..+|.|++++.|.
T Consensus 156 M~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~i~~~~~~~~~~~v~gl~~~~v~ 235 (412)
T 3u06_A 156 MDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVL 235 (412)
T ss_dssp HTEETTEECHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEETTCCSCCCCCEEECSSCTTSEEETTCCCEECC
T ss_pred ecCCCCCCccHHHHHHHHHHhhhhhcccCceEEEEEEEEEEeCCeeEEcCCCCCCCceeeeeecCCCCEEEcceEEEEeC
Confidence 7899999999999999999999865556789999999999999999999987654432 222222 2467799999999
Q ss_pred CHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHHHH
Q 002175 78 NPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHV 153 (956)
Q Consensus 78 S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~I 153 (956)
|++|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||.. .|.+++|+.+|
T Consensus 236 s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~I 311 (412)
T 3u06_A 236 DPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNI 311 (412)
T ss_dssp SHHHHHHHHHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCC--------------CTT
T ss_pred CHHHHHHHHHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCCCCCEEEEEEEEEECCCCCcCC----ccchhHhHHHH
Confidence 9999999999999999999998 999999999999999888888889999999999999874 46899999999
Q ss_pred hhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccccccc
Q 002175 154 MKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSL 228 (956)
Q Consensus 154 NkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~ 228 (956)
|+||++||+||.+|++++.|||||+||||+||+|+|||||+|+||+||||+..+++||++||+||++++.|++.+
T Consensus 312 NkSL~aLg~vI~aL~~~~~hiPyRdSkLT~LLqdsLgGnskt~mI~~vsP~~~~~~ETl~TLrfA~rv~~i~~~~ 386 (412)
T 3u06_A 312 NRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTK 386 (412)
T ss_dssp THHHHHHHHHHHHHHTTCSCCCGGGSHHHHHHGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHHHHCC--
T ss_pred hHHHHHHHHHHHHHhccCCCCCccccHHHHHHHHhcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988643
No 25
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=4.9e-51 Score=456.49 Aligned_cols=219 Identities=27% Similarity=0.376 Sum_probs=174.0
Q ss_pred CCCC------CCCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--cccccee
Q 002175 1 MEGS------SHDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELV 72 (956)
Q Consensus 1 M~Gs------~~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLt 72 (956)
|+|+ ..++|||||++++||..+......+..|.|+|||+|||||+|||||.+.. ...+..+.. .+|.|++
T Consensus 152 M~G~~~~~~~~~~~Giipr~~~~lF~~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~~--~l~i~ed~~~~v~v~gl~ 229 (387)
T 2heh_A 152 MGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKKA--KLRVLEDGKQQVQVVGLQ 229 (387)
T ss_dssp HC-----------CCHHHHHHHHHHHHHTSHHHHTTTCEEEEEEEEEETTEEEETTTTTE--ECEEEECTTCCEEEETCC
T ss_pred eccCCCCCCcccCCceehhhHHHHHHHhhcccccCceEEEEEEEEEecCCeEEECCCCCc--cceEEEcCCCCEEecCCE
Confidence 6675 35799999999999999875333457899999999999999999998743 345555544 4577999
Q ss_pred EEEeCCHHHHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCC-Ccchhh
Q 002175 73 QEKVDNPLEFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAED-DSGERI 147 (956)
Q Consensus 73 ev~V~S~eE~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~-s~G~rl 147 (956)
++.|.|++|++.+|..|.++|++++|. |||||+||+|+|.+. ....|+|+|||||||||..+++ ..+.++
T Consensus 230 ~~~V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~-----~~~~skL~lVDLAGSER~~~t~~~~~~~~ 304 (387)
T 2heh_A 230 EHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK-----GRMHGKFSLVDLAGNERGADTSSADRQTR 304 (387)
T ss_dssp CEEESSHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESS-----SSEEEEEEEEECCCCC-------------
T ss_pred EEEeCCHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEEC-----CeeeeEEEEEECCCCccccccccccccch
Confidence 999999999999999999999999987 999999999999875 2467999999999999998886 467888
Q ss_pred HhHHHHhhhHHHHHHHHHHhhcCCCCcCCCCCchhhhhccc-cCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccccc
Q 002175 148 TDVLHVMKSLSALGDVLSSLTSRKDIVPYENSMLTKVLADS-LGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVL 226 (956)
Q Consensus 148 kEa~~INkSL~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDs-LgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~ 226 (956)
+|+.+||+||++||+||.+|.+++.||||||||||+||+|+ |||||+|+||+||||+..+++||++||+||+|||+|++
T Consensus 305 ~E~~~INkSL~aLg~vI~aL~~~~~hvPYRdSKLTrlLqdsllGgnskT~mIa~isP~~~~~~ETlsTLrfA~rak~I~~ 384 (387)
T 2heh_A 305 MEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCEYTLNTLRYADRVKELSP 384 (387)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTTCSCCCGGGSHHHHHTGGGGSSTTEEEEEEEEECCBGGGHHHHHHHHHHHHHHCC---
T ss_pred hhHHHHhHHHHHHHHHHHHHhcCCCCCCccccHHHHHHhhhccCCCCeEEEEEEeCCccchHHHHHHHHHHHHHhccCcC
Confidence 99999999999999999999999999999999999999999 59999999999999999999999999999999999865
No 26
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=8.4e-51 Score=449.04 Aligned_cols=213 Identities=24% Similarity=0.377 Sum_probs=173.2
Q ss_pred CCCCChHHHHHHHHHHhhccCCC-CCceEEEEEEEEEEEcCcccccCCcCCCCCceEeecccccccceeEEEeCCHHHHH
Q 002175 5 SHDRGLYARCFEELFDLSNSDTT-ATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSLESSIELVQEKVDNPLEFS 83 (956)
Q Consensus 5 ~~d~GIIPRal~dLF~~I~~~~~-~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~~~V~gLtev~V~S~eE~l 83 (956)
++++|||||++++||+.+..... ....|.|+|||+|||||+|||||.+...... ....+.+++++.|.|.+|++
T Consensus 122 ~~~~GIipra~~~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~~~-----~~~~~~~~~~~~v~s~~e~~ 196 (344)
T 3dc4_A 122 PEHLGILPRALGDIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTPHMPM-----VAARCQRCTCLPLHSQADLH 196 (344)
T ss_dssp GGGCCHHHHHHHHHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCTTSBC-----CSSTTTCSCCEECSSHHHHH
T ss_pred cccCCcHHHHHHHHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCCCCcc-----ccccccCceecccCCHHHHH
Confidence 36789999999999999976433 2457999999999999999999987553221 11234589999999999999
Q ss_pred HHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHHHHhhhHHH
Q 002175 84 KVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHVMKSLSA 159 (956)
Q Consensus 84 ~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~INkSL~a 159 (956)
.+|..|.++|++++|. |||||+||+|+|.+. ...|+|+|||||||||..++++.|.+++|+.+||+||++
T Consensus 197 ~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~------~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~INkSL~a 270 (344)
T 3dc4_A 197 HILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSK------THHSRMNIVDLAGSEGVRRTGHEGVARQEGVNINLGLLS 270 (344)
T ss_dssp HHHHHHHHTCC----------CCEEEEEEEEEECS------SCEEEEEEEECCCCCCC-------------CCSCCHHHH
T ss_pred HHHHHHHhhcccccccCCCCCCCceEEEEEEEEec------CcEEEEEEEECCCCccccccccccchhHHHHHHhHhHHH
Confidence 9999999999999987 999999999999753 357999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccccccc
Q 002175 160 LGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSL 228 (956)
Q Consensus 160 Lg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~ 228 (956)
||+||.+|+.++.|||||+||||+||+|+|||||+|+||+||||+..+++||++||+||+||+.....+
T Consensus 271 Lg~vI~aL~~~~~hiPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETlsTL~fA~ra~~~~~~~ 339 (344)
T 3dc4_A 271 INKVVMSMAAGHTVIPYRDSVLTTVLQASLTAQSYLTFLACISPHQCDLSETLSTLRFGTSAKAAALEH 339 (344)
T ss_dssp HHHHHHHHHTTCSSCCGGGSHHHHHTTTTSSTTCEEEEEEEECCCGGGHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhccCCcCCccccHHHHHHHHHhCCCCEEEEEEEeCCchhhHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999865433
No 27
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=2.6e-50 Score=481.20 Aligned_cols=220 Identities=31% Similarity=0.451 Sum_probs=184.2
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCC--CceEeecc---cccccceeEEEeCCHH
Q 002175 6 HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNG--LAKIRLQS---LESSIELVQEKVDNPL 80 (956)
Q Consensus 6 ~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~--~~~v~~~~---~~~V~gLtev~V~S~e 80 (956)
.++|||||++++||+.|....+.+.+|.|+|||+|||||+|||||.+.... ...++.+. ..+|.|++++.|.|++
T Consensus 483 ~~~Giipr~~~~lf~~~~~~~~~~~~~~v~~s~~Eiyne~i~DLl~~~~~~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~ 562 (715)
T 4h1g_A 483 PTNGMIPLSLKKIFNDIEELKEKGWSYTVRGKFIEIYNEAIVDLLNPKIDPNTKYEIKHDDIAGKTTVTNVSTIDIKSPE 562 (715)
T ss_dssp TTTSHHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEEETTEEEESSSCCCCTTCCCCEEEETTTTEEEETTCCCEECSCHH
T ss_pred CCCCcHHHHHHHHHHHHHHhhcCCceEEEEEEEEEEECCEEEECCCCCCCCCCcceeEEecCCCCEEEeCCEEEEcCCHH
Confidence 468999999999999998766677899999999999999999999875432 22333322 2467799999999999
Q ss_pred HHHHHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCCCcchhhHhHHHHhhh
Q 002175 81 EFSKVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHVMKS 156 (956)
Q Consensus 81 E~l~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~INkS 156 (956)
|++.+|..|.++|++++|. |||||+||+|+|.+.+...+....|+|+|||||||||..++++.|.|++|+.+||+|
T Consensus 563 ~~~~~~~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~s 642 (715)
T 4h1g_A 563 QAITILNQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKS 642 (715)
T ss_dssp HHHHHHHHHHCC----------CGGGSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC---------CHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCcccccccCccccccEEEEEEEEEEecCCCCEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence 9999999999999999987 999999999999999888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhc-CCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccc
Q 002175 157 LSALGDVLSSLTS-RKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTV 225 (956)
Q Consensus 157 L~aLg~VI~aLs~-k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~ 225 (956)
|++||+||.+|+. ++.|||||+||||+||+|+|||||+|+|||||||+..+++||++||+||+|||+|+
T Consensus 643 L~~L~~vi~al~~~~~~~vpyR~SkLT~lL~~slggn~~t~~i~~isp~~~~~~et~~tL~fa~r~~~i~ 712 (715)
T 4h1g_A 643 LSCLGDVIHSLNLKDGSHVPYRNSKLTYLLKHSLGGNSKTLMFVNISPLTKDLNETINSLRFATKVNNTR 712 (715)
T ss_dssp HHHHHHHHHHHHHCSCCCCCGGGCHHHHHTGGGTSTTCEEEEEEEECCBGGGHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHhhcCCCcCCCccCHHHHHHHhhcCCCceEEEEEEECCChhhHHHHHHHHHHHHHhccce
Confidence 9999999999985 45899999999999999999999999999999999999999999999999999986
No 28
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=8.4e-51 Score=457.32 Aligned_cols=216 Identities=27% Similarity=0.352 Sum_probs=173.3
Q ss_pred CCCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccccCCcCCCCCceEeeccc--ccccceeEEEeCCHHHHH
Q 002175 6 HDRGLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRELLPQTGNGLAKIRLQSL--ESSIELVQEKVDNPLEFS 83 (956)
Q Consensus 6 ~d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~DLL~~~~~~~~~v~~~~~--~~V~gLtev~V~S~eE~l 83 (956)
.++|||||++++||..+......+..|.|+|||+|||||+|||||.+.. ...+..+.. .+|.|++++.|.|++|++
T Consensus 183 ~~~Giipra~~~lF~~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~--~l~i~ed~~~~v~V~gl~e~~V~s~~e~~ 260 (410)
T 1v8k_A 183 ASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKA--KLRVLEDSRQQVQVVGLQEYLVTCADDVI 260 (410)
T ss_dssp GGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTTTE--EEEEEECSSCCEEEETCCCEEESSHHHHH
T ss_pred ccCcchhhhHHHHHHHHhhhcccCccEEEEEEEEEeeCCEEEECCCCCC--CceEEECCCCCeEecCCEEEEeCCHHHHH
Confidence 4689999999999999875333467899999999999999999998743 345555544 457799999999999999
Q ss_pred HHHHHHHhhccCcCCC----CCcceEEEEEEEEeeccCCCceeeeeeEEeeccCCCccccCC-CcchhhHhHHHHhhhHH
Q 002175 84 KVLKSAFQSRGNDVSK----FNVSHLIIMIHIYYNNLITGENLYSKLSLVDLAGSEGLIAED-DSGERITDVLHVMKSLS 158 (956)
Q Consensus 84 ~lL~~G~~~R~~asT~----SSRSH~IFtI~V~q~~~~~~~~~~SkLsfVDLAGSER~~kt~-s~G~rlkEa~~INkSL~ 158 (956)
.+|..|.++|++++|. |||||+||+|+|.+.. ...|+|+|||||||||..+++ ..|.+++|+.+||+||+
T Consensus 261 ~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~-----~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL~ 335 (410)
T 1v8k_A 261 KMINMGSACRTSGQTFANSNSSRSHACFQILLRTKG-----RLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLL 335 (410)
T ss_dssp HHHHHHHHTCC--------CCCSSEEEEEEEEESSS-----SEEEEEEEEECCCCCC------------TTHHHHHHHHH
T ss_pred HHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCC-----cceeEEEEEECCCccccccccccccchhHHHHHHhHHHH
Confidence 9999999999999987 9999999999998752 467999999999999998886 46788899999999999
Q ss_pred HHHHHHHHhhcCCCCcCCCCCchhhhhccc-cCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccccccc
Q 002175 159 ALGDVLSSLTSRKDIVPYENSMLTKVLADS-LGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSL 228 (956)
Q Consensus 159 aLg~VI~aLs~k~~~VPYRdSKLTrLLqDs-LgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~ 228 (956)
+||+||.+|..++.||||||||||+||+|+ |||||+|+||+||||+..+++||++||+||++|++|..++
T Consensus 336 aLg~vI~aL~~~~~hIPYRdSKLTrLLqdsllGgnskT~mIa~iSP~~~~~~ETlsTLrfA~rak~i~~~~ 406 (410)
T 1v8k_A 336 ALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELSHHH 406 (410)
T ss_dssp HHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHhcCCCCCCcccchhHHHHhhcccCCCceEEEEEEeCCccccHHHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999999999999999 5999999999999999999999999999999999986543
No 29
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.90 E-value=2.7e-25 Score=206.16 Aligned_cols=82 Identities=37% Similarity=0.526 Sum_probs=76.7
Q ss_pred HHHhhhHHHHHHHHHHhhcC-CCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccC
Q 002175 151 LHVMKSLSALGDVLSSLTSR-KDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLG 229 (956)
Q Consensus 151 ~~INkSL~aLg~VI~aLs~k-~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~ 229 (956)
.+||+||++||+||.+|.++ ..||||||||||+||+|+|||||+|+||+||||+..+++||++||+||++|+.|++.+.
T Consensus 2 ~~IN~SL~~Lg~vI~aL~~~~~~hvPyRdSkLT~lL~dsLgGnskt~mi~~vsp~~~~~~ETl~TL~fA~rak~i~~~~~ 81 (100)
T 2kin_B 2 KNINKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLDGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVS 81 (100)
T ss_dssp CBSSHHHHHHHHHHHHHHHTCCSSCCGGGCHHHHHTHHHHHSSEEEEEEEEECCBGGGHHHHHHHHHHHHHHHTCEEEEC
T ss_pred CcchHHHHHHHHHHHHHHhcCCCCCCCccchHHHHHHHHhcCCCceeEEEEeCcccchHHHHHHHHHHHHHHHhccCcce
Confidence 46999999999999999987 58999999999999999999999999999999999999999999999999999987765
Q ss_pred ccc
Q 002175 230 NRD 232 (956)
Q Consensus 230 n~~ 232 (956)
.+.
T Consensus 82 ~n~ 84 (100)
T 2kin_B 82 VNL 84 (100)
T ss_dssp CEE
T ss_pred ecc
Confidence 543
No 30
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=99.90 E-value=3.3e-24 Score=204.12 Aligned_cols=113 Identities=33% Similarity=0.468 Sum_probs=89.6
Q ss_pred hhhHHHHHHHHHHhhcCC-CCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhcccccccCccc
Q 002175 154 MKSLSALGDVLSSLTSRK-DIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVLSLGNRD 232 (956)
Q Consensus 154 NkSL~aLg~VI~aLs~k~-~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~~~~n~~ 232 (956)
|+||++||+||.+|++++ .||||||||||+||+|+|||||+|+||+||||+..+++||++||+||++|+.|++.+..+.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~~hvPyRdSkLT~lL~dsLggn~~t~~i~~isp~~~~~~eTl~TL~fa~rak~i~n~~~~n~ 80 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKTIKNTVSVNL 80 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCCSSCCGGGSHHHHHTHHHHHSSSEEEEEEEECCSGGGHHHHHHHHHHHHHHTTCEEEECCCB
T ss_pred CCCHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHHcCCCccceeeeeeCCCcccHHHHHHHHHHHHHhCcccCCceecC
Confidence 899999999999999874 7999999999999999999999999999999999999999999999999999988765543
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 233 TIKKWRDIANDARKELYEREKEIQDLKQEILGLRQALKE 271 (956)
Q Consensus 233 ~i~k~k~~~~~~r~el~~~~~eI~~Lq~EI~~Lk~~L~~ 271 (956)
... .....+++.....+++.|+.++..|+.++..
T Consensus 81 ~~~-----~~~l~~~~~~e~~~~~~L~~~i~~Le~el~~ 114 (117)
T 3kin_B 81 ELT-----AEEWKKKYEKEKEKNKALKSVIQHLEVELNR 114 (117)
T ss_dssp CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 1223333344445555555566555555543
No 31
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=97.43 E-value=9.8e-05 Score=79.85 Aligned_cols=180 Identities=10% Similarity=0.172 Sum_probs=107.7
Q ss_pred CCChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEE-cCcccccCCcCCCC-C--ceEeecccccccceeEEEeCC-HHH
Q 002175 7 DRGLYARCFEELFDLSNSDTTATARFNFAVTVFELY-NEQLRELLPQTGNG-L--AKIRLQSLESSIELVQEKVDN-PLE 81 (956)
Q Consensus 7 d~GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIY-NE~V~DLL~~~~~~-~--~~v~~~~~~~V~gLtev~V~S-~eE 81 (956)
..|=.||++..+|.....- -..+|.+++||+||| ||.++|||..++.. . .+...++...+.|++.+.|.+ .+|
T Consensus 103 GsGKT~ral~q~f~~~~~~--~~~~Y~~tlq~veLy~Ne~~~DLL~~~~~~~k~eIk~~~~g~~iv~~s~~i~V~~~~ed 180 (298)
T 2o0a_A 103 PHGSLRESLIKFLAEKDTI--YQKQYVITLQFVFLSDDEFSQDMLLDYSHNDKDSIKLKFEKHSISLDSKLVIIENGLED 180 (298)
T ss_dssp CCHHHHHHHHHHHHSTTSH--HHHHEEEEEEEEEEECC-CEEETTSCCC------CEEEECSSCEEEESCCEEESSGGGG
T ss_pred CCCccHHHHHHHHHHhhhh--cccceEEEEEEEEEecCCchHHhcCCCCCCCcceEEecCCCCEEecccEEEEccccHHH
Confidence 4566799999999966320 117999999999999 99999999743332 2 233345555677999999999 899
Q ss_pred HHHHHHHHHhhccCcCCCCC-cceEEEEEEEEeeccC--CC-ceeeeeeEEeeccCCCccccCCCcchhhHhHHHHhhhH
Q 002175 82 FSKVLKSAFQSRGNDVSKFN-VSHLIIMIHIYYNNLI--TG-ENLYSKLSLVDLAGSEGLIAEDDSGERITDVLHVMKSL 157 (956)
Q Consensus 82 ~l~lL~~G~~~R~~asT~SS-RSH~IFtI~V~q~~~~--~~-~~~~SkLsfVDLAGSER~~kt~s~G~rlkEa~~INkSL 157 (956)
+..++..+...+ .+ +.-.|..+.+...+.. .. ....--+.|+.+.-.. +.
T Consensus 181 v~~~~~~~~~~~------~~~~gi~i~k~~~~~~~~~~~~~~~~~~~d~yf~e~~~~~--------------------~~ 234 (298)
T 2o0a_A 181 LPLNFSCDEHPN------LPHSGMGIIKVQFFPRDSKSDGNNDPVPVDFYFIELNNLK--------------------SI 234 (298)
T ss_dssp SCTTTTCC-------------CEEEEEEEEEEESCC-------CCCEEEEEEEECSHH--------------------HH
T ss_pred HHHHhhcccccc------cCCCCceEEEEEEecCcccccccCCCCceEEEEEEeCCHH--------------------HH
Confidence 888772222111 11 2345666666553321 11 1223457777654321 11
Q ss_pred HHHHHHHHHhhcCCCCcCCCCCchhhhhccccCCCCeEEEEEeeCCCCCCHHHhHHHHHHHHHhccccc
Q 002175 158 SALGDVLSSLTSRKDIVPYENSMLTKVLADSLGESSKTLMIVNICPNAANMSETLSSLNFSSRARSTVL 226 (956)
Q Consensus 158 ~aLg~VI~aLs~k~~~VPYRdSKLTrLLqDsLgGNSkT~mIv~VSPs~~~~eETLsTLrFAsrAK~I~~ 226 (956)
..|.+ ++..+ .+-.|+++-+|+..|. ..+.++++++.... +.-..|..+++...+.+
T Consensus 235 ~~l~~---~~~~~----~~~~spi~~il~~ll~-~tks~~~~~l~~~~----~~~~lL~~s~~i~~~~~ 291 (298)
T 2o0a_A 235 EQFDK---SIFKK----ESCETPIALVLKKLIS-DTKSFFLLNLNDSK----NVNKLLTISEEVQTQLC 291 (298)
T ss_dssp HHHHH---HHHTC-----CCCSHHHHHHHHHHH-HSBCEEEEEECCGG----GHHHHHHHHHHHHHHTC
T ss_pred HHHHh---hcccc----cccCCcHHHHHHHHHh-cCcceEEEEecCCC----chhHHHHHHHHhhcccC
Confidence 12222 22222 3456788888876665 47889999997543 22337778888777655
No 32
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.91 E-value=0.17 Score=53.72 Aligned_cols=24 Identities=13% Similarity=0.151 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 252 EKEIQDLKQEILGLRQALKEANDQ 275 (956)
Q Consensus 252 ~~eI~~Lq~EI~~Lk~~L~~~~~q 275 (956)
...+..+..++..+...+......
T Consensus 24 ~~~~~~lp~el~~le~~~~~l~~~ 47 (256)
T 3na7_A 24 EPLIREKRKDLDKALNDKEAKNKA 47 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHH
Confidence 333333344444444444333333
No 33
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=96.51 E-value=0.22 Score=51.13 Aligned_cols=34 Identities=26% Similarity=0.444 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhhhh
Q 002175 393 AVSKKLEEELKKRDA---LIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 393 ~l~kkLeEELkkree---~LErL~eE~ekL~qrL~eK 426 (956)
...--|+.++..++. .+++|..|...|.++|.-+
T Consensus 144 Er~alLE~El~EKe~l~~~~QRLkdE~rDLk~El~v~ 180 (189)
T 2v71_A 144 ERNAFLESELDEKESLLVSVQRLKDEARDLRQELAVR 180 (189)
T ss_dssp HHHHHHHHHHHHHHHHHCCC-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445666655443 3378888888888888766
No 34
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=96.46 E-value=0.45 Score=47.80 Aligned_cols=21 Identities=14% Similarity=0.156 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002175 402 LKKRDALIERLHEENEKLFDR 422 (956)
Q Consensus 402 Lkkree~LErL~eE~ekL~qr 422 (956)
+......+..+..+...+..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~ 196 (284)
T 1c1g_A 176 LERAEERAELSEGKCAELEEE 196 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333
No 35
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=96.36 E-value=0.057 Score=62.67 Aligned_cols=61 Identities=7% Similarity=0.079 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002175 306 DKHKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEV 366 (956)
Q Consensus 306 ek~k~~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~ 366 (956)
...+..+++.++.+++...++++.++++.++++.+++++++++++..++.++++++.....
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~ 583 (597)
T 3oja_B 523 RETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNR 583 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHhhhhhhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333344444455555555556666677777777888888888888888888877776554
No 36
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=96.01 E-value=0.37 Score=51.01 Aligned_cols=44 Identities=9% Similarity=0.115 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 315 NAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 315 ~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
+..+...+..+.....++..+++..+..+..++..+..++..+.
T Consensus 99 ie~~~~~i~~lE~eile~~e~ie~~~~~l~~~~~~l~~~~~~l~ 142 (256)
T 3na7_A 99 EDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLAL 142 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333444444444444444444444443
No 37
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=96.00 E-value=0.027 Score=71.59 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHhhccCCCCC-ceEEEEEEEEEEEcCcccc
Q 002175 9 GLYARCFEELFDLSNSDTTAT-ARFNFAVTVFELYNEQLRE 48 (956)
Q Consensus 9 GIIPRal~dLF~~I~~~~~~~-~~fsVsVSylEIYNE~V~D 48 (956)
+|+-|.|++|-..|+..-... .....+|..+.||.=.+++
T Consensus 432 ~lY~~lF~wlv~~iN~~l~~~~~~~~~~IgvLDi~GFE~f~ 472 (1184)
T 1i84_S 432 AKFERLFRWILTRVNKALDKTKRQGASFLGILDIAGFEIFE 472 (1184)
T ss_dssp HHHHHHHHHHHHHHTTTCC------CEEEEEEECCCCCCCS
T ss_pred HHHHHHHHHHHHHHHHhhCCCccCCcceEEEeecCCcCCCC
Confidence 788999999999998643332 3345778889998766655
No 38
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=95.76 E-value=0.033 Score=70.73 Aligned_cols=10 Identities=20% Similarity=-0.024 Sum_probs=4.9
Q ss_pred ccCCCCeEEE
Q 002175 188 SLGESSKTLM 197 (956)
Q Consensus 188 sLgGNSkT~m 197 (956)
+.-|.+++.|
T Consensus 766 ~~iG~TKVF~ 775 (1184)
T 1i84_S 766 YRIGQSKIFF 775 (1184)
T ss_dssp CCBCSSEEEE
T ss_pred eeEcCeEEEE
Confidence 3345555554
No 39
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=95.66 E-value=0.14 Score=59.16 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=0.0
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCCCc
Q 002175 414 EENEKLFDRLTEKASSVSSPQLSSPLSKGSVNVQPR 449 (956)
Q Consensus 414 eE~ekL~qrL~eK~Ssgsspq~~Sp~s~~s~~~q~~ 449 (956)
.|...+.-.|+..-+.+.++..++|-..++..-.||
T Consensus 233 ~ei~Qm~mvLE~~g~~~~~~g~s~~~g~gs~~~s~r 268 (562)
T 3ghg_A 233 TDMPQMRMELERPGGNEITRGGSTSYGTGSETESPR 268 (562)
T ss_dssp ------------------------------------
T ss_pred hhhhcEEEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Confidence 455556666666645555555555555555544444
No 40
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=95.66 E-value=0.073 Score=61.74 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 318 LRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 318 Lq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
++...+.+....+..+..+++++.+.+.+++++.+++.+++
T Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~ 554 (597)
T 3oja_B 514 LKERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLD 554 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhhhhHHHHHHHHHhhhhhhcchhhHHhhhHHHHHHHh
Confidence 33333333333344444444444555555555555555554
No 41
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=95.48 E-value=2.3 Score=43.71 Aligned_cols=17 Identities=6% Similarity=-0.134 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 002175 393 AVSKKLEEELKKRDALI 409 (956)
Q Consensus 393 ~l~kkLeEELkkree~L 409 (956)
....+.-+.++-++..+
T Consensus 137 ~kln~aiEr~alLE~El 153 (189)
T 2v71_A 137 QRLNQAIERNAFLESEL 153 (189)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333444444444444
No 42
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=95.11 E-value=0.39 Score=66.50 Aligned_cols=35 Identities=17% Similarity=0.283 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHH
Q 002175 249 YEREKEIQDLKQEILGLRQALKEANDQCVLLYNEV 283 (956)
Q Consensus 249 ~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~El 283 (956)
.+...++..|+.++..++.+|.+...+...+..++
T Consensus 1930 ~et~~~V~~l~~~L~~~~~~L~~k~~ea~~~l~~i 1964 (3245)
T 3vkg_A 1930 RDTEAQVKDLQVSLAQKNRELDVKNEQANQKLKQM 1964 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34446677777777777777776655554444333
No 43
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=95.04 E-value=0.5 Score=59.65 Aligned_cols=40 Identities=23% Similarity=0.323 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHHhhccCCCCCceEEEEEEEEEEEcCcccc
Q 002175 9 GLYARCFEELFDLSNSDTTATARFNFAVTVFELYNEQLRE 48 (956)
Q Consensus 9 GIIPRal~dLF~~I~~~~~~~~~fsVsVSylEIYNE~V~D 48 (956)
+|+-|.|++|-..|+..-........++..+.||.=++++
T Consensus 406 ~lY~~LF~wlV~~iN~~l~~~~~~~~~IgvLDI~GFE~f~ 445 (1080)
T 2dfs_A 406 HIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFE 445 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSSCCCEEEEEEEECCCCCCS
T ss_pred HHHHHHHHHHHHHHHHhhccccccCceEEeeccCCccccC
Confidence 6888899999888876322222235678889998766665
No 44
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=94.94 E-value=0.73 Score=63.88 Aligned_cols=47 Identities=15% Similarity=0.232 Sum_probs=13.2
Q ss_pred HHhhHHHHHhhCcccccc--------CchhHHHHHHHHHHHHHHHHhhcccccee
Q 002175 870 MLTSLDELAERMPSLLDI--------DHPCAQRQIADARRMVEVLQQMRSDVALL 916 (956)
Q Consensus 870 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (956)
+..-++++.+++|..++. ..|-.-=...+..++-+.|..||++..=|
T Consensus 2981 v~~~~~~~l~~lP~~~~~~~~~~~~~~~pl~~vl~QE~~r~n~Ll~~ir~sL~~L 3035 (3245)
T 3vkg_A 2981 LRATITEWTKLLPKPLKQLKRTTQNIKDPLFRCFEREISTGGKLVKKITNDLANL 3035 (3245)
T ss_dssp ----------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCccccchhhccccccCChHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 566667777777776542 12222122345556666666666665433
No 45
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=94.47 E-value=1.3 Score=44.62 Aligned_cols=53 Identities=11% Similarity=0.139 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 306 DKHKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 306 ek~k~~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
.....+..+...|+.++.+...........+.+.+.++..|+.+++.++..+.
T Consensus 62 ~~k~~Leke~~~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~El~~~k~~~~ 114 (168)
T 3o0z_A 62 NSKSQTDKDYYQLQAILEAERRDRGHDSEMIGDLQARITSLQEEVKHLKHNLE 114 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444555555555555544444444555555566666666666655554
No 46
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=93.70 E-value=1.5 Score=55.47 Aligned_cols=23 Identities=9% Similarity=0.252 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Q 002175 339 RDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 339 ~e~eIe~LqeEik~LE~qL~el~ 361 (956)
.+.++..|++++..|+.++.++.
T Consensus 1021 L~~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1021 TEQLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555554443
No 47
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=93.46 E-value=5.6 Score=38.08 Aligned_cols=108 Identities=17% Similarity=0.229 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHhhhHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH
Q 002175 253 KEIQDLKQEILGLRQALKEANDQCVLLYNEVQKAWKVSFTLQSDLKSENYMLAD---KHKIEKEQNAQLRNQVAQLLQLE 329 (956)
Q Consensus 253 ~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~Elq~~~k~~~eLE~eL~~e~~~Lee---k~k~~kee~~qLq~ql~~l~~~e 329 (956)
.++..+..++..|+..+.........+.............|+.++......+.+ ....+......|..++..+....
T Consensus 13 ~E~~~~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rl 92 (129)
T 2fxo_A 13 KEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRL 92 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555554443333333333333333334444444444433322 22223334444555555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 330 QEQKMQIQQRDSTIKTLQAKINSIESQRNEA 360 (956)
Q Consensus 330 eElk~qlqe~e~eIe~LqeEik~LE~qL~el 360 (956)
++...........-..++.++..|+.++..+
T Consensus 93 eeeee~~~~L~~~kkkle~e~~~Lk~~led~ 123 (129)
T 2fxo_A 93 EDEEEMNAELTAKKRKLEDECSELKRDIDDL 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555555555555666666555543
No 48
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=91.41 E-value=15 Score=41.35 Aligned_cols=94 Identities=11% Similarity=0.156 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 249 YEREKEIQDLKQEILGLRQALKEANDQCVLLYNEVQKAWKVSFTLQSDLKSENYMLADKHKIEKEQNAQLRNQVAQLLQL 328 (956)
Q Consensus 249 ~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~Elq~~~k~~~eLE~eL~~e~~~Leek~k~~kee~~qLq~ql~~l~~~ 328 (956)
..+...|.+|+.++..+.+.......-...+.+.+.+..+...+.+..+.+....|+..+..+++.+..--..+..|+..
T Consensus 63 r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~ 142 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQINEDLRSRIEILRRKVIEQVQRINLLQKN 142 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34556666777777666665555544444444444444444444444444444444444444333222211133333333
Q ss_pred HHHHHHHHHHHHHH
Q 002175 329 EQEQKMQIQQRDST 342 (956)
Q Consensus 329 eeElk~qlqe~e~e 342 (956)
.+++..+|+.++..
T Consensus 143 l~~q~~kiqRLE~~ 156 (390)
T 1deq_A 143 VRDQLVDMKRLEVD 156 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 33344444444333
No 49
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=90.63 E-value=5.7 Score=44.52 Aligned_cols=20 Identities=30% Similarity=0.368 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 256 QDLKQEILGLRQALKEANDQ 275 (956)
Q Consensus 256 ~~Lq~EI~~Lk~~L~~~~~q 275 (956)
+.++..|+.|++.|......
T Consensus 63 r~~~~rIe~L~~~L~~~s~s 82 (390)
T 1deq_A 63 QDFTSRINKLRDSLFNYQKN 82 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 44555555555555544333
No 50
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=90.44 E-value=13 Score=42.63 Aligned_cols=55 Identities=15% Similarity=0.210 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 002175 311 EKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSE 365 (956)
Q Consensus 311 ~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~ 365 (956)
+.+....|+.++..+.......-..|.-++.-|+.+..+|++||..+........
T Consensus 109 ~~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q~~~Cr 163 (491)
T 1m1j_A 109 YGHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRACK 163 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444445555555555554444456666777778888888888887776666443
No 51
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=85.01 E-value=27 Score=33.24 Aligned_cols=30 Identities=37% Similarity=0.536 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 002175 397 KLEEELKKRDALIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 397 kLeEELkkree~LErL~eE~ekL~qrL~eK 426 (956)
.|.++|.+..+++++|+.+++.+..|+..+
T Consensus 82 ~Lnq~Lq~a~ae~erlr~~~~~~~~r~~~~ 111 (121)
T 3mq7_A 82 TLNHKLQDASAEVERLRRENQVLSVRIADK 111 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHhhchhhhhHhhhc
Confidence 345556666777888889999888888877
No 52
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=84.56 E-value=11 Score=43.75 Aligned_cols=26 Identities=15% Similarity=0.233 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 247 ELYEREKEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 247 el~~~~~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
+...+...|++|+.+++++.+.-...
T Consensus 58 qErDltkrINELKnqLEdlsKnsKds 83 (562)
T 3ghg_A 58 VNQDFTNRINKLKNSLFEYQKNNKDS 83 (562)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred hcCcHHHHHHHHHHHHHHHHhhchhH
Confidence 34455666777777776664444443
No 53
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=84.21 E-value=47 Score=37.48 Aligned_cols=45 Identities=7% Similarity=-0.048 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 317 QLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 317 qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
++.........+.+.++.+.+..+..+.++...+.+....++.+.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (487)
T 3oja_A 432 NAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATLQELV 476 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHHHHHH
Confidence 333333333333334444444444444444444444444444433
No 54
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=83.31 E-value=39 Score=33.66 Aligned_cols=32 Identities=16% Similarity=0.365 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 325 LLQLEQEQKMQIQQRDSTIKTLQAKINSIESQ 356 (956)
Q Consensus 325 l~~~eeElk~qlqe~e~eIe~LqeEik~LE~q 356 (956)
.......++.++.+.+..+..++.++..|+.-
T Consensus 113 ~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v 144 (154)
T 2ocy_A 113 IEILNKRLTEQLREKDTLLDTLTLQLKNLKKV 144 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445555666666666666666655543
No 55
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=83.15 E-value=24 Score=39.83 Aligned_cols=32 Identities=6% Similarity=-0.161 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 327 QLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 327 ~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
+..+..+.+++..+++.+.++.++.++..++.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (487)
T 3oja_A 435 RDWDMYQHKETQLAEENARLKKLNGEADLALA 466 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhH
Confidence 33333333344444444444444444444443
No 56
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=83.04 E-value=25 Score=34.15 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 311 EKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 311 ~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
..+++..|+.++.......++.+.++.+.+.++..|+.++.+|+..+.
T Consensus 87 ~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le~~~~ 134 (138)
T 3hnw_A 87 KDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLETELN 134 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555555555666666666666666666665554
No 57
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=80.60 E-value=32 Score=38.62 Aligned_cols=27 Identities=15% Similarity=0.315 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 334 MQIQQRDSTIKTLQAKINSIESQRNEA 360 (956)
Q Consensus 334 ~qlqe~e~eIe~LqeEik~LE~qL~el 360 (956)
.++++++.+|..|+.+++.++.+++++
T Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (471)
T 3mq9_A 443 KKVEELEGEITTLNHKLQDASAEVERL 469 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456666666666666666666666554
No 58
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=79.86 E-value=43 Score=31.91 Aligned_cols=110 Identities=14% Similarity=0.138 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHH---HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 247 ELYEREKEIQDLKQEILGLRQALKEANDQCVLLYNEVQKAWKVSFT---LQSDLKSENYMLADKHKIEKEQNAQLRNQVA 323 (956)
Q Consensus 247 el~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~Elq~~~k~~~e---LE~eL~~e~~~Leek~k~~kee~~qLq~ql~ 323 (956)
++..+..++..|+..+................+..+.......... .-.+.......+......+...+..+...+.
T Consensus 14 E~~~~~eel~~lke~l~k~e~~r~ele~~~~~l~~Ek~~L~~qL~~E~~~l~e~EE~~~~L~~~k~eLe~~l~el~~rle 93 (129)
T 2fxo_A 14 EMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLE 93 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555544444444333333333322222111111 1111122222233333334455555666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 324 QLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQ 356 (956)
Q Consensus 324 ~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~q 356 (956)
.......++...-...+..+..|+..+..++..
T Consensus 94 eeee~~~~L~~~kkkle~e~~~Lk~~led~e~~ 126 (129)
T 2fxo_A 94 DEEEMNAELTAKKRKLEDECSELKRDIDDLELT 126 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666666666666666677777777777766543
No 59
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=79.83 E-value=12 Score=34.53 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002175 337 QQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 337 qe~e~eIe~LqeEik~LE~qL 357 (956)
.+.+.++..|+.++..++..+
T Consensus 40 ~~~E~Ei~sL~kk~~~lE~el 60 (101)
T 3u1c_A 40 KQLEDDIVQLEKQLRVTEDSR 60 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444433
No 60
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=79.26 E-value=62 Score=37.41 Aligned_cols=27 Identities=19% Similarity=0.288 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 335 QIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
.+..++..++.+..+|..|+..+..+.
T Consensus 169 ~i~~L~~~~~~l~~ki~~l~~~~~~~~ 195 (464)
T 1m1j_B 169 SLRVLRAVIDSLHKKIQKLENAIATQT 195 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555566666666554433
No 61
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=78.80 E-value=5.9 Score=37.88 Aligned_cols=25 Identities=32% Similarity=0.537 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 250 EREKEIQDLKQEILGLRQALKEAND 274 (956)
Q Consensus 250 ~~~~eI~~Lq~EI~~Lk~~L~~~~~ 274 (956)
+.+..|..|+.|++.|+..+.....
T Consensus 12 ~rD~~Ie~Lkreie~lk~ele~l~~ 36 (120)
T 3i00_A 12 EKDHLIERLYREISGLKAQLENMKT 36 (120)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778888888888888777643
No 62
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=78.66 E-value=65 Score=37.21 Aligned_cols=21 Identities=19% Similarity=0.241 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002175 334 MQIQQRDSTIKTLQAKINSIE 354 (956)
Q Consensus 334 ~qlqe~e~eIe~LqeEik~LE 354 (956)
..++....+|+.|+..+..+.
T Consensus 175 ~~~~~l~~ki~~l~~~~~~~~ 195 (464)
T 1m1j_B 175 AVIDSLHKKIQKLENAIATQT 195 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444445555555554433
No 63
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=74.75 E-value=38 Score=30.39 Aligned_cols=50 Identities=16% Similarity=0.163 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 312 KEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 312 kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
+.+++.|+.+...+.+..++.+........+++.|+++....+..+..+.
T Consensus 26 qmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 26 QMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444455555555555555555555444
No 64
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=74.55 E-value=54 Score=30.32 Aligned_cols=18 Identities=6% Similarity=-0.007 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002175 341 STIKTLQAKINSIESQRN 358 (956)
Q Consensus 341 ~eIe~LqeEik~LE~qL~ 358 (956)
.....++.++..|+.+|.
T Consensus 76 ~e~~~~e~kn~~L~~qL~ 93 (97)
T 2eqb_B 76 KEKYAIEILNKRLTEQLR 93 (97)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 334445555555555554
No 65
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=72.91 E-value=20 Score=32.87 Aligned_cols=17 Identities=24% Similarity=0.393 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q 002175 340 DSTIKTLQAKINSIESQ 356 (956)
Q Consensus 340 e~eIe~LqeEik~LE~q 356 (956)
+..+..|+.++..++.+
T Consensus 43 E~ei~sL~kKiq~lE~e 59 (101)
T 3u59_A 43 EEEQQGLQKKLKGTEDE 59 (101)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
No 66
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=72.31 E-value=58 Score=30.84 Aligned_cols=20 Identities=10% Similarity=0.262 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 253 KEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 253 ~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
.++..|+.+..+|+.+|...
T Consensus 6 ~~~~~lq~~~~ql~~qL~k~ 25 (112)
T 1x79_B 6 DQVKKLQLMLRQANDQLEKT 25 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555443
No 67
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=70.96 E-value=72 Score=30.36 Aligned_cols=20 Identities=25% Similarity=0.468 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 253 KEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 253 ~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
.+|.+++..+..|..++...
T Consensus 38 ~Ei~elrr~iq~L~~el~~l 57 (131)
T 3tnu_A 38 SEISELRRTMQNLEIELQSQ 57 (131)
T ss_dssp ---CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444433
No 68
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=70.83 E-value=73 Score=30.21 Aligned_cols=20 Identities=25% Similarity=0.474 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 253 KEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 253 ~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
.+|.+++..+..|..++...
T Consensus 36 ~Ei~elrr~iq~L~~el~~l 55 (129)
T 3tnu_B 36 HEISEMNRMIQRLRAEIDNV 55 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444443
No 69
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=70.33 E-value=36 Score=31.10 Aligned_cols=92 Identities=11% Similarity=0.100 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCcccccccc--ccccccChhHHHHHHHHHHHHHHHHH
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEVRSTIRSEPMPAVSSVLR--TTGDGMDSSAVSKKLEEELKKRDALI 409 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~rs~~~~es~~~s~s~~k--~~ee~~d~s~l~kkLeEELkkree~L 409 (956)
++.+++....++..++.++.+++.-+.++..-.+.......- +.-... ..+.........+.++.+++.++.++
T Consensus 18 l~~~~~~l~~q~~~l~~~~~e~~~~~~eL~~l~~d~~vy~~i----G~vfv~~~~~ea~~~L~~~~e~ie~~i~~le~~~ 93 (117)
T 2zqm_A 18 YQQQLQLVVQQKQKVQLELTEAKKALDEIESLPDDAVVYKTV----GTLIVKTTKDKAVAELKEKIETLEVRLNALERQE 93 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCEEEEE----TTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHhHHHh----hHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444455555556666666666666555555433321111100 000111 11223466677778888888888888
Q ss_pred HHHHHHHHHHHHHhhhhc
Q 002175 410 ERLHEENEKLFDRLTEKA 427 (956)
Q Consensus 410 ErL~eE~ekL~qrL~eK~ 427 (956)
+.+..+.+++...|.++-
T Consensus 94 ~~l~~~l~~lk~~l~~~~ 111 (117)
T 2zqm_A 94 KKLNEKLKELTAQIQSAL 111 (117)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888888888873
No 70
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=70.12 E-value=70 Score=30.44 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002175 248 LYEREKEIQDLKQEILGLRQA 268 (956)
Q Consensus 248 l~~~~~eI~~Lq~EI~~Lk~~ 268 (956)
+.++...|..|+.|+..++..
T Consensus 40 i~elrr~iq~L~~el~~l~~~ 60 (131)
T 3tnu_A 40 ISELRRTMQNLEIELQSQLSM 60 (131)
T ss_dssp -CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 334444444444444444333
No 71
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=70.08 E-value=64 Score=38.27 Aligned_cols=70 Identities=11% Similarity=0.148 Sum_probs=30.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhc
Q 002175 294 QSDLKSENYMLADKHKIEKEQNAQLRNQVAQLLQLEQ-E----QKMQIQQRDS-TIKTLQAKINSIESQRNEALHS 363 (956)
Q Consensus 294 E~eL~~e~~~Leek~k~~kee~~qLq~ql~~l~~~ee-E----lk~qlqe~e~-eIe~LqeEik~LE~qL~el~~s 363 (956)
++..+..+.+++.+.+.+++...+|.+++........ + +..++++++. ..+.++.+.+.|+.+++.++..
T Consensus 507 ~~~~~~~~~~~~~~~~~~~e~~~ql~~kme~~~~~~~~e~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 507 HEMQRKNEQMMEQKERSYQEHLKQLTEKMENDRVQLLKEQERTLALKLQEQEQLLKEGFQKESRIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333444444555555555555555554433322111 1 3333333221 1233455555555555555544
No 72
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=69.70 E-value=68 Score=29.41 Aligned_cols=22 Identities=18% Similarity=0.379 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002175 333 KMQIQQRDSTIKTLQAKINSIE 354 (956)
Q Consensus 333 k~qlqe~e~eIe~LqeEik~LE 354 (956)
.......+..+..|+..|+.++
T Consensus 78 ek~~~~aE~ev~~L~RriqllE 99 (101)
T 3u1c_A 78 EENAAKAESEVASLNRRIQLVE 99 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 3344444555666666665554
No 73
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=69.64 E-value=79 Score=30.13 Aligned_cols=18 Identities=17% Similarity=0.357 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002175 256 QDLKQEILGLRQALKEAN 273 (956)
Q Consensus 256 ~~Lq~EI~~Lk~~L~~~~ 273 (956)
..|+.++.+-.+.+....
T Consensus 28 ~lLq~qLTqAQe~l~~~e 45 (121)
T 3mq7_A 28 HLLQQELTEAQKGFQDVE 45 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555444444443
No 74
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=69.56 E-value=49 Score=37.64 Aligned_cols=45 Identities=7% Similarity=-0.064 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 311 EKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 311 ~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
+.++..++...+........+++.. +.....+|..|+..+..+..
T Consensus 89 ml~~~~~~~~~~~~~~~~i~~l~~~-------~~~~~~~i~~L~~~v~~l~~ 133 (411)
T 3ghg_C 89 MLEEIMKYEASILTHDSSIRYLQEI-------YNSNNQKIVNLKEKVAQLEA 133 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 3344444444443333333334433 34444444555555544444
No 75
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=67.49 E-value=86 Score=29.72 Aligned_cols=22 Identities=32% Similarity=0.466 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002175 247 ELYEREKEIQDLKQEILGLRQA 268 (956)
Q Consensus 247 el~~~~~eI~~Lq~EI~~Lk~~ 268 (956)
++.++...|..|+.|+..++..
T Consensus 37 Ei~elrr~iq~L~~el~~l~~~ 58 (129)
T 3tnu_B 37 EISEMNRMIQRLRAEIDNVKKQ 58 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhH
Confidence 3334444444444444444433
No 76
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=66.90 E-value=86 Score=29.52 Aligned_cols=16 Identities=19% Similarity=0.397 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHH
Q 002175 339 RDSTIKTLQAKINSIE 354 (956)
Q Consensus 339 ~e~eIe~LqeEik~LE 354 (956)
.+.+++.|++++.=++
T Consensus 88 LE~~iesL~eEl~FLK 103 (119)
T 3ol1_A 88 LERKVESLQEEIAFLK 103 (119)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444444444444443
No 77
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=66.90 E-value=41 Score=31.39 Aligned_cols=51 Identities=14% Similarity=0.163 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 308 HKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 308 ~k~~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
...++...+.+...+.++.....+....++.....+..|+.++..++.++.
T Consensus 32 VdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~ 82 (103)
T 4h22_A 32 VDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALK 82 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444455555555555555555566666667777777777777764
No 78
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=65.86 E-value=61 Score=30.55 Aligned_cols=10 Identities=20% Similarity=0.538 Sum_probs=4.9
Q ss_pred HHHHHHHHHH
Q 002175 347 QAKINSIESQ 356 (956)
Q Consensus 347 qeEik~LE~q 356 (956)
++++..|+.+
T Consensus 107 eeEl~eLq~q 116 (119)
T 3ol1_A 107 EEEIQELQAQ 116 (119)
T ss_dssp HHHHHHHHSC
T ss_pred HHHHHHHHHH
Confidence 4455555444
No 79
>1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A*
Probab=65.56 E-value=77 Score=37.56 Aligned_cols=13 Identities=15% Similarity=0.243 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHH
Q 002175 410 ERLHEENEKLFDR 422 (956)
Q Consensus 410 ErL~eE~ekL~qr 422 (956)
+.++.|-..|..+
T Consensus 570 ~~~~~ei~~l~~~ 582 (592)
T 1f5n_A 570 RIMKNEIQDLQTK 582 (592)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 4444555555544
No 80
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=65.55 E-value=35 Score=33.27 Aligned_cols=31 Identities=16% Similarity=0.362 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 325 LLQLEQEQKMQIQQRDSTIKTLQAKINSIES 355 (956)
Q Consensus 325 l~~~eeElk~qlqe~e~eIe~LqeEik~LE~ 355 (956)
.......++.++.+.+..+..++..+..|+.
T Consensus 101 ~e~r~~~L~~ql~e~e~ll~~lq~QL~~LK~ 131 (135)
T 2e7s_A 101 IEILNKRLTEQLREKDMLLDTLTLQLKNLKK 131 (135)
T ss_dssp HHHHHHHHHHTTTHHHHCC------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555555556666665555543
No 81
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=65.10 E-value=25 Score=41.48 Aligned_cols=46 Identities=13% Similarity=0.315 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 314 QNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNE 359 (956)
Q Consensus 314 e~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~e 359 (956)
+...|..++.+.......+....+.++.+-..++.++...+....+
T Consensus 406 e~~~l~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~a~~~~~~ 451 (575)
T 2i1j_A 406 ERQKLEDEIRAKQEEVSRIQQEVELKDSETRRLQEEVEDARRKQDE 451 (575)
T ss_dssp ------------------------------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444445555555555556666666666555444
No 82
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=64.98 E-value=49 Score=32.18 Aligned_cols=48 Identities=13% Similarity=0.137 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 314 QNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 314 e~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
++..+...+..+.......+.+++...+++..+++++..|+.++.++.
T Consensus 83 ~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~le 130 (138)
T 3hnw_A 83 DIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKLE 130 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444445555555555555555555555554443
No 83
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=64.24 E-value=59 Score=29.55 Aligned_cols=25 Identities=28% Similarity=0.322 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 311 EKEQNAQLRNQVAQLLQLEQEQKMQ 335 (956)
Q Consensus 311 ~kee~~qLq~ql~~l~~~eeElk~q 335 (956)
+..++..|+.++..+......+..+
T Consensus 54 ye~~i~~Lr~~i~~~~~ek~~l~~e 78 (93)
T 3s4r_A 54 YEEEMRELRRQVDQLTNDKARVEVE 78 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666655555444333333
No 84
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=64.15 E-value=65 Score=28.93 Aligned_cols=91 Identities=14% Similarity=0.121 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccc--cccccChhHHHHHHHHHHHHHHHHH
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEVRSTIRSEPMPAVSSVLRT--TGDGMDSSAVSKKLEEELKKRDALI 409 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~rs~~~~es~~~s~s~~k~--~ee~~d~s~l~kkLeEELkkree~L 409 (956)
++.+++....++..++.++.+++.-+.++..-.+........- .-.... .+.........+.++.+++.++.++
T Consensus 13 lq~~~~~l~~q~~~l~~~~~e~~~~~~EL~~l~~d~~vy~~iG----~vfv~~~~~e~~~~L~~~~e~i~~~i~~le~~~ 88 (107)
T 1fxk_A 13 LQQQAQAISVQKQTVEMQINETQKALEELSRAADDAEVYKSSG----NILIRVAKDELTEELQEKLETLQLREKTIERQE 88 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCEEEEET----TEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHh----HHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455555566666666655555544333211111000 001111 1112345555566666666666666
Q ss_pred HHHHHHHHHHHHHhhhh
Q 002175 410 ERLHEENEKLFDRLTEK 426 (956)
Q Consensus 410 ErL~eE~ekL~qrL~eK 426 (956)
+.+..+..++...|.++
T Consensus 89 ~~~~~~l~~lk~~l~~~ 105 (107)
T 1fxk_A 89 ERVMKKLQEMQVNIQEA 105 (107)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 66666666666665543
No 85
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=63.84 E-value=96 Score=29.28 Aligned_cols=7 Identities=29% Similarity=0.159 Sum_probs=2.5
Q ss_pred HHHHHHH
Q 002175 259 KQEILGL 265 (956)
Q Consensus 259 q~EI~~L 265 (956)
+.++.+|
T Consensus 44 q~~idel 50 (110)
T 2v4h_A 44 QELIDKL 50 (110)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 86
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=63.20 E-value=95 Score=28.72 Aligned_cols=37 Identities=19% Similarity=0.350 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 002175 242 NDARKELYEREKEIQDLKQEILGLRQALKEANDQCVL 278 (956)
Q Consensus 242 ~~~r~el~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~ 278 (956)
...+.++..+..+......++..|...+.........
T Consensus 8 e~lre~l~~le~~~~~~~~e~~~L~~~l~eE~~~R~~ 44 (97)
T 2eqb_B 8 NQLKEDYNTLKRELSDRDDEVKRLREDIAKENELRTK 44 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555566666665555554444333
No 87
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=63.15 E-value=1.4e+02 Score=33.48 Aligned_cols=31 Identities=13% Similarity=0.257 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
+..+..+.+++|++|+.++..+..+|+++..
T Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (471)
T 3mq9_A 434 LDAEKAQGQKKVEELEGEITTLNHKLQDASA 464 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555566777777777777777766544
No 88
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=62.05 E-value=55 Score=37.17 Aligned_cols=28 Identities=18% Similarity=0.091 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 335 QIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
++..++..+..++.++..|+.++.++..
T Consensus 106 ~i~~l~~~~~~~~~~i~~l~~~i~~l~~ 133 (409)
T 1m1j_C 106 TIQQLTDMHIMNSNKITQLKQKIAQLES 133 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3333444444455555555555555443
No 89
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=61.79 E-value=65 Score=30.39 Aligned_cols=17 Identities=24% Similarity=0.286 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHHHH
Q 002175 398 LEEELKKRDALIERLHE 414 (956)
Q Consensus 398 LeEELkkree~LErL~e 414 (956)
+.++...+..+++.|..
T Consensus 88 l~~eKe~L~~ql~~Lq~ 104 (110)
T 2v4h_A 88 LVEKKEYLQEQLEQLQR 104 (110)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHH
Confidence 33333333333333333
No 90
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=61.72 E-value=26 Score=32.56 Aligned_cols=29 Identities=10% Similarity=0.267 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 331 EQKMQIQQRDSTIKTLQAKINSIESQRNE 359 (956)
Q Consensus 331 Elk~qlqe~e~eIe~LqeEik~LE~qL~e 359 (956)
.++.+++.++.+...|.+++..|+.++..
T Consensus 16 ~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 16 TLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555666666667777777777777754
No 91
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=60.90 E-value=1.1e+02 Score=30.46 Aligned_cols=41 Identities=20% Similarity=0.151 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 318 LRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 318 Lq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
|+..+..+.....+++..+.++.+.++.+++++..|..++.
T Consensus 73 L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n 113 (152)
T 3a7p_A 73 LQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENN 113 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444444555555555555555554443
No 92
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=58.68 E-value=2.6e+02 Score=32.50 Aligned_cols=33 Identities=12% Similarity=0.146 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 330 QEQKMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 330 eElk~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
...+....+.+.+...++++....+..+.++.+
T Consensus 76 akY~~~~AeY~~kl~aYe~~~~~~~k~lae~ek 108 (497)
T 3iox_A 76 AKYQKDLADYPVKLKAYEDEQTSIKAALAELEK 108 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344555666677777777777777777766555
No 93
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=58.27 E-value=2.5e+02 Score=32.65 Aligned_cols=39 Identities=8% Similarity=0.227 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 317 QLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIES 355 (956)
Q Consensus 317 qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~ 355 (956)
+.++.+..-.....+.+.++...+.....+++.+.+++.
T Consensus 70 kY~~dlakY~~~~AeY~~kl~aYe~~~~~~~k~lae~ek 108 (497)
T 3iox_A 70 KYQADLAKYQKDLADYPVKLKAYEDEQTSIKAALAELEK 108 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 333344444444455555666666666666666555554
No 94
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=57.22 E-value=1.1e+02 Score=27.74 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHHH
Q 002175 247 ELYEREKEIQDLKQEILGLRQALKEANDQCVLLYNEV 283 (956)
Q Consensus 247 el~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~El 283 (956)
.+..+..+..........+...++.....+.....++
T Consensus 10 Km~~lk~e~e~a~d~ae~~e~~~k~~e~~~~~~E~ei 46 (101)
T 3u59_A 10 KMQMLKLDKENAIDRAEQAEADKKQAEDRCKQLEEEQ 46 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 3333444444444444444444444444443333333
No 95
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=56.95 E-value=1.4e+02 Score=29.58 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002175 254 EIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 254 eI~~Lq~EI~~Lk~~L~~~ 272 (956)
.|..|+.++..++..+...
T Consensus 69 ~I~~L~~El~~l~~ki~dL 87 (152)
T 3a7p_A 69 TLAILQKELKSKEQEIRRL 87 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455555555554444443
No 96
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=56.95 E-value=1.6e+02 Score=33.99 Aligned_cols=29 Identities=21% Similarity=0.360 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002175 335 QIQQRDSTIKTLQAKINSIESQRNEALHS 363 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE~qL~el~~s 363 (956)
.|..++..++.+..+|+.|+..+..+...
T Consensus 164 ~i~~l~~~~~~~~~~i~~l~~~~~~~~~~ 192 (461)
T 3ghg_B 164 NLRVLRSILENLRSKIQKLESDVSAQMEY 192 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 44445555555555566666555544443
No 97
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=56.11 E-value=13 Score=43.87 Aligned_cols=23 Identities=9% Similarity=0.125 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Q 002175 404 KRDALIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 404 kree~LErL~eE~ekL~qrL~eK 426 (956)
.+++++...++..++..++|.+.
T Consensus 437 ~~~~~~~~a~~~~~~~~~~l~~~ 459 (575)
T 2i1j_A 437 RLQEEVEDARRKQDEAAAALLAA 459 (575)
T ss_dssp -----CHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333444444455556666665
No 98
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=53.30 E-value=61 Score=30.31 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
.+.-++.++..+..|++++.+++.++.+...
T Consensus 73 NK~tl~~R~~~Vsalq~KiaeLKrqLAd~va 103 (107)
T 2k48_A 73 NKSTLQNRRAAVSTLETKLGELKRQLADLVA 103 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5667788889999999999999999876544
No 99
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=53.06 E-value=1.3e+02 Score=27.30 Aligned_cols=30 Identities=17% Similarity=0.179 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
.+.++.+++.+..++..++.-...++..+.
T Consensus 65 ~~~ql~e~~dE~~Sl~~q~~~~~~qLdkL~ 94 (96)
T 3q8t_A 65 FKRQQLELDDELKSVENQMRYAQMQLDKLK 94 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 344444445555555555555555554443
No 100
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=52.07 E-value=1.2e+02 Score=27.31 Aligned_cols=38 Identities=11% Similarity=0.151 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002175 326 LQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHS 363 (956)
Q Consensus 326 ~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s 363 (956)
.........++++.+.+.+.|..+++.++.++.++...
T Consensus 37 r~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~ 74 (81)
T 1wt6_A 37 RTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAE 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33333444566677777788888888888888775543
No 101
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=50.17 E-value=58 Score=28.63 Aligned_cols=21 Identities=24% Similarity=0.547 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002175 332 QKMQIQQRDSTIKTLQAKINS 352 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~ 352 (956)
+..++++++..|..|+.++.+
T Consensus 45 LEk~L~ekd~eI~~LqseLDK 65 (72)
T 3nmd_A 45 LELELDQKDELIQMLQNELDK 65 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444444333
No 102
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=49.09 E-value=43 Score=29.43 Aligned_cols=30 Identities=7% Similarity=0.177 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 331 EQKMQIQQRDSTIKTLQAKINSIESQRNEA 360 (956)
Q Consensus 331 Elk~qlqe~e~eIe~LqeEik~LE~qL~el 360 (956)
.....+.++++.+.....++..|+.++...
T Consensus 37 ~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 37 QRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344456667777777777777777776544
No 103
>3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* 4dx0_P*
Probab=48.55 E-value=6.4 Score=29.31 Aligned_cols=17 Identities=24% Similarity=0.604 Sum_probs=15.0
Q ss_pred hhhhccccccccccccc
Q 002175 646 VLRMRGIDQDTWRHQVT 662 (956)
Q Consensus 646 ~~~~~~~~~~~~~~~~~ 662 (956)
|-|++|+|.|+-+||-|
T Consensus 14 v~KLKglDi~~i~~~yT 30 (31)
T 3m50_P 14 VVKLKGLDIETIQQSYD 30 (31)
T ss_dssp HHHHTTCCSCCCCCCCC
T ss_pred HHHHhcCChhhhhhccc
Confidence 56899999999999876
No 104
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=47.87 E-value=2.2e+02 Score=28.27 Aligned_cols=39 Identities=3% Similarity=0.036 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 002175 327 QLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSE 365 (956)
Q Consensus 327 ~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~ 365 (956)
.....++.+..+.+..+..-...+..++.++..++.-..
T Consensus 108 ~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v~~ 146 (154)
T 2ocy_A 108 KEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKVMH 146 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333446666777777777778888888888877766433
No 105
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=45.87 E-value=3.5e+02 Score=30.65 Aligned_cols=47 Identities=19% Similarity=0.116 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 311 EKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 311 ~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL 357 (956)
+.++..++...+.........++..+...+.+|+.|+.++..++...
T Consensus 89 ml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l~~~~ 135 (409)
T 1m1j_C 89 IIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLESHC 135 (409)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence 33344444444444444444555555566666666766666665544
No 106
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=45.69 E-value=1.7e+02 Score=27.85 Aligned_cols=58 Identities=21% Similarity=0.165 Sum_probs=29.7
Q ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 292 TLQSDLKSENYMLADKHKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAK 349 (956)
Q Consensus 292 eLE~eL~~e~~~Leek~k~~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeE 349 (956)
.|..++......++...........+|+.++.++.....+.+.+.++.....+.|..+
T Consensus 19 ~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e 76 (120)
T 3i00_A 19 RLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAE 76 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555555555566666666666666655554443333333333333333
No 107
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=45.56 E-value=74 Score=25.05 Aligned_cols=41 Identities=24% Similarity=0.297 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 317 QLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 317 qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL 357 (956)
+|.+.+..+..+.+.++.+.-..+.-|.-|+.++..++.++
T Consensus 7 qlenevaslenenetlkkknlhkkdliaylekeianlrkki 47 (49)
T 3he5_A 7 QLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKI 47 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHh
Confidence 34444555555555555555556666666666666666655
No 108
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=45.50 E-value=1.1e+02 Score=27.25 Aligned_cols=40 Identities=15% Similarity=0.132 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 318 LRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 318 Lq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL 357 (956)
|-.++.++....+-++.++...+.....++.++.+++.++
T Consensus 35 LI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeEl 74 (77)
T 2w83_C 35 LIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEEL 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444455555554444
No 109
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=45.38 E-value=1.3e+02 Score=27.15 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 333 KMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 333 k~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
..++....++|+.++++|+..+..+.++..
T Consensus 50 ~~el~~h~~ei~~le~~i~rhk~~i~~l~~ 79 (84)
T 1gmj_A 50 ENEISHHAKEIERLQKEIERHKQSIKKLKQ 79 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 344555566666777777777666666554
No 110
>1x79_B RAB GTPase binding effector protein 1; rabaptin5, GGA protein, GAT domain, intracellular trafficking, protein transport; 2.41A {Homo sapiens} SCOP: h.1.27.2
Probab=44.42 E-value=2.1e+02 Score=27.05 Aligned_cols=16 Identities=0% Similarity=0.011 Sum_probs=6.5
Q ss_pred HHHHHHHHHHHHHHHH
Q 002175 253 KEIQDLKQEILGLRQA 268 (956)
Q Consensus 253 ~eI~~Lq~EI~~Lk~~ 268 (956)
.+...|+.++..+...
T Consensus 13 ~~~~ql~~qL~k~~~~ 28 (112)
T 1x79_B 13 LMLRQANDQLEKTMKD 28 (112)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334444444444333
No 111
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=43.98 E-value=1.8e+02 Score=26.02 Aligned_cols=21 Identities=14% Similarity=0.278 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 002175 333 KMQIQQRDSTIKTLQAKINSI 353 (956)
Q Consensus 333 k~qlqe~e~eIe~LqeEik~L 353 (956)
...--+.+.+++.|++++.=|
T Consensus 62 ~l~r~dLE~kvesL~eEl~fL 82 (86)
T 3swk_A 62 SLARLDLERKVESLQEEIAFL 82 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 333344455555555555433
No 112
>2ic6_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 1.15A {Sin nombre virus}
Probab=43.43 E-value=1.1e+02 Score=27.23 Aligned_cols=31 Identities=16% Similarity=0.404 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
.+.-++.+...+..|++++.+++.++.+...
T Consensus 43 NK~~~~~R~~~V~~lq~Ki~elkrqlAd~va 73 (78)
T 2ic6_A 43 NKSTLQSRRAAVSALETKLGELKRELADLIA 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5667888899999999999999999976544
No 113
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=43.40 E-value=1.9e+02 Score=26.19 Aligned_cols=33 Identities=12% Similarity=-0.008 Sum_probs=18.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 392 SAVSKKLEEELKKRDALIERLHEENEKLFDRLT 424 (956)
Q Consensus 392 s~l~kkLeEELkkree~LErL~eE~ekL~qrL~ 424 (956)
......+..++..+...+..+..+.+.+..++.
T Consensus 70 ~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 70 HLDLNNSKNTLAKLIDRKSELERELRRIDMEIK 102 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444555555555556666666666655554
No 114
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=41.97 E-value=4.3e+02 Score=30.54 Aligned_cols=25 Identities=12% Similarity=0.243 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 248 LYEREKEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 248 l~~~~~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
.......|.+|+..+..+.+.....
T Consensus 60 erdv~~rI~kLkn~L~~~s~s~~~s 84 (491)
T 1m1j_A 60 DQNYSQRIDNIRQQLADSQNKYKTS 84 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHHhhcchH
Confidence 3344555666666655554444333
No 115
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=41.88 E-value=2.3e+02 Score=26.74 Aligned_cols=22 Identities=27% Similarity=0.419 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002175 250 EREKEIQDLKQEILGLRQALKE 271 (956)
Q Consensus 250 ~~~~eI~~Lq~EI~~Lk~~L~~ 271 (956)
.+......|..|++.++..+..
T Consensus 7 dL~~~~~~L~~E~e~~k~K~~~ 28 (111)
T 2v66_B 7 DLQADNQRLKYEVEALKEKLEH 28 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555544444
No 116
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=41.78 E-value=2.1e+02 Score=32.61 Aligned_cols=29 Identities=28% Similarity=0.227 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002175 335 QIQQRDSTIKTLQAKINSIESQRNEALHS 363 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE~qL~el~~s 363 (956)
.+......|..|+..+.....++..++..
T Consensus 99 ~~~~~~~~i~~l~~~~~~~~~~i~~L~~~ 127 (411)
T 3ghg_C 99 SILTHDSSIRYLQEIYNSNNQKIVNLKEK 127 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444444333
No 117
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=41.21 E-value=1e+02 Score=25.30 Aligned_cols=34 Identities=29% Similarity=0.332 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHH
Q 002175 249 YEREKEIQDLKQEILGLRQALKEANDQCVLLYNE 282 (956)
Q Consensus 249 ~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~E 282 (956)
+++-.+++.|+.|+..|+.++..-..+...+..+
T Consensus 6 dQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~e 39 (54)
T 1deb_A 6 DQLLKQVEALKMENSNLRQELEDNSNHLTKLETE 39 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhh
Confidence 4566778888888888888887765555444444
No 118
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=40.81 E-value=2.6e+02 Score=27.14 Aligned_cols=30 Identities=17% Similarity=0.344 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 329 EQEQKMQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 329 eeElk~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
..++...+.+++...++|...|..|+.+++
T Consensus 100 LrELEADLKEKDsMVe~LT~TiG~LrKELE 129 (167)
T 4gkw_A 100 LGELEADLKEKDSMVESLTETIGILRKELE 129 (167)
T ss_dssp THHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 344556666677777777777777766663
No 119
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=40.11 E-value=1.4e+02 Score=23.85 Aligned_cols=40 Identities=23% Similarity=0.326 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 318 LRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 318 Lq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL 357 (956)
|++++..+....-++...-+..++.|..|.+++..++.+.
T Consensus 8 lrkkiarlkkdnlqlerdeqnlekiianlrdeiarlenev 47 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEV 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 3334443333333333344455667777777777777654
No 120
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=39.18 E-value=2.2e+02 Score=25.74 Aligned_cols=29 Identities=21% Similarity=0.365 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 333 KMQIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 333 k~qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
...+...+.++..++.++..++.++.+..
T Consensus 83 e~~i~~le~~~~~l~~~l~~lk~~l~~~~ 111 (117)
T 2zqm_A 83 EVRLNALERQEKKLNEKLKELTAQIQSAL 111 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555555555555555554433
No 121
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=38.62 E-value=3e+02 Score=27.11 Aligned_cols=63 Identities=14% Similarity=0.243 Sum_probs=31.5
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 293 LQSDLKSENYMLADKHKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIES 355 (956)
Q Consensus 293 LE~eL~~e~~~Leek~k~~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~ 355 (956)
+...+.+....+.+....+..+...-++-+..+......++.++.+.+...++++.+..++..
T Consensus 73 l~~~veeA~~~L~eYn~rL~~E~~dR~~L~~~L~~~~~~~~~~l~e~e~~leeyK~Kl~rv~~ 135 (152)
T 4fla_A 73 LSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQ 135 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444555555555544444444444444444455555555555555555555444433
No 122
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=38.39 E-value=2.2e+02 Score=25.52 Aligned_cols=16 Identities=19% Similarity=0.142 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHHHH
Q 002175 332 QKMQIQQRDSTIKTLQ 347 (956)
Q Consensus 332 lk~qlqe~e~eIe~Lq 347 (956)
++.+...++..+..|-
T Consensus 60 Lk~E~~~wq~Rl~~LL 75 (81)
T 2jee_A 60 LKEQQNGWQERLQALL 75 (81)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3333334444444433
No 123
>4fi5_A Nucleoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.20A {Hantaan virus}
Probab=38.18 E-value=1.3e+02 Score=28.40 Aligned_cols=33 Identities=21% Similarity=0.407 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALHSS 364 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~ 364 (956)
.+.-++.++..+..|+.++.+|+.++.+.....
T Consensus 60 NK~tl~~R~~~Vs~lq~KiaeLKrqLAd~va~~ 92 (113)
T 4fi5_A 60 NKRTLTDREGVAVSIQAKIDELKRQLADRIATG 92 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566788889999999999999999998776643
No 124
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=37.96 E-value=3.2e+02 Score=31.51 Aligned_cols=25 Identities=12% Similarity=0.207 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQ 356 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~q 356 (956)
++..++....+|+.|+..+..++..
T Consensus 168 l~~~~~~~~~~i~~l~~~~~~~~~~ 192 (461)
T 3ghg_B 168 LRSILENLRSKIQKLESDVSAQMEY 192 (461)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4444444455555555555444433
No 125
>2ic9_A Nucleocapsid protein; hantavirus, bunyaviridae, ssRNA negative- strand viruses, antiparallel coiled coil, viral protein; 2.00A {Sin nombre virus}
Probab=37.24 E-value=1.5e+02 Score=27.45 Aligned_cols=32 Identities=16% Similarity=0.403 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEALHS 363 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el~~s 363 (956)
.+.-++.+...+..|+.++.+|+.++.+....
T Consensus 43 Nk~~~~~R~~~V~~lq~Ki~elkr~lAd~v~~ 74 (96)
T 2ic9_A 43 NKSTLQSRRAAVSALETKLGELKRELADLIAA 74 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56678888999999999999999999876653
No 126
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=36.84 E-value=2.7e+02 Score=26.20 Aligned_cols=24 Identities=13% Similarity=0.254 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 253 KEIQDLKQEILGLRQALKEANDQC 276 (956)
Q Consensus 253 ~eI~~Lq~EI~~Lk~~L~~~~~q~ 276 (956)
+....|+..+..|..++.......
T Consensus 3 k~~rdL~~~~~~L~~E~e~~k~K~ 26 (111)
T 2v66_B 3 QRNRDLQADNQRLKYEVEALKEKL 26 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666666654443
No 127
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=36.16 E-value=3.8e+02 Score=27.66 Aligned_cols=10 Identities=0% Similarity=0.096 Sum_probs=5.6
Q ss_pred HHHHHHHHHh
Q 002175 212 LSSLNFSSRA 221 (956)
Q Consensus 212 LsTLrFAsrA 221 (956)
...+.|+-.+
T Consensus 124 ~elfd~~~~~ 133 (213)
T 1ik9_A 124 RELIAYALDT 133 (213)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4666666544
No 128
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=34.99 E-value=2.3e+02 Score=24.73 Aligned_cols=25 Identities=0% Similarity=0.207 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 334 MQIQQRDSTIKTLQAKINSIESQRN 358 (956)
Q Consensus 334 ~qlqe~e~eIe~LqeEik~LE~qL~ 358 (956)
.+++..+..+...++.+.....+|.
T Consensus 48 kKiq~lE~eld~~ee~l~~a~~kLe 72 (81)
T 1ic2_A 48 KKLKGTEDELDKYSESLKDAQEKLE 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333344333333333
No 129
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=34.97 E-value=2.5e+02 Score=25.18 Aligned_cols=23 Identities=13% Similarity=0.372 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 002175 331 EQKMQIQQRDSTIKTLQAKINSI 353 (956)
Q Consensus 331 Elk~qlqe~e~eIe~LqeEik~L 353 (956)
+...+.++...+++.++.++++|
T Consensus 49 eae~rn~eL~~e~~~l~~~~eel 71 (81)
T 1wt6_A 49 EAEARNRDLEAHVRQLQERMELL 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444455554444
No 130
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=34.97 E-value=65 Score=31.41 Aligned_cols=29 Identities=3% Similarity=0.093 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 332 QKMQIQQRDSTIKTLQAKINSIESQRNEA 360 (956)
Q Consensus 332 lk~qlqe~e~eIe~LqeEik~LE~qL~el 360 (956)
++.+..+.+..+..-..-+..++.|+.++
T Consensus 101 ~e~r~~~L~~ql~e~e~ll~~lq~QL~~L 129 (135)
T 2e7s_A 101 IEILNKRLTEQLREKDMLLDTLTLQLKNL 129 (135)
T ss_dssp HHHHHHHHHHTTTHHHHCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444444444443
No 131
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.94 E-value=1e+02 Score=27.26 Aligned_cols=47 Identities=11% Similarity=-0.034 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 315 NAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEAL 361 (956)
Q Consensus 315 ~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~ 361 (956)
+..|..++.......+++...+-+.+..|..|+.++..|..++.+..
T Consensus 16 i~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~ 62 (78)
T 3efg_A 16 LVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVR 62 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34445555555555555666666666666666666666666665443
No 132
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=34.13 E-value=5.3e+02 Score=28.72 Aligned_cols=49 Identities=8% Similarity=0.316 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 002175 315 NAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHS 363 (956)
Q Consensus 315 ~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s 363 (956)
.+.|+.++..+....+.+...+..+...+..++.++..++-.+..+.+.
T Consensus 207 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lkp~l~ql~k~ 255 (373)
T 3hhm_B 207 YDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLRKT 255 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHH
Confidence 3445555555555555555555555555556666666665555444443
No 133
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=30.84 E-value=2.9e+02 Score=24.61 Aligned_cols=43 Identities=14% Similarity=0.236 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 318 LRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEA 360 (956)
Q Consensus 318 Lq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el 360 (956)
|+.--+++..-...++..+...+.+...++..+..++.+..++
T Consensus 30 LrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL 72 (78)
T 3iv1_A 30 LKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEEL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333344444444444444444444444444443
No 134
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=30.57 E-value=3.3e+02 Score=25.41 Aligned_cols=18 Identities=22% Similarity=0.274 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002175 254 EIQDLKQEILGLRQALKE 271 (956)
Q Consensus 254 eI~~Lq~EI~~Lk~~L~~ 271 (956)
+-..|.=++.-|+..+..
T Consensus 24 EKsal~YqVdlLKD~LEe 41 (103)
T 4h22_A 24 EKTNFMYQVDTLKDMLLE 41 (103)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333344444443333
No 135
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=30.35 E-value=3.4e+02 Score=25.28 Aligned_cols=32 Identities=6% Similarity=0.229 Sum_probs=14.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 392 SAVSKKLEEELKKRDALIERLHEENEKLFDRL 423 (956)
Q Consensus 392 s~l~kkLeEELkkree~LErL~eE~ekL~qrL 423 (956)
.+..+.++..++.++..++.+.+....+.+++
T Consensus 87 ~eA~~~l~~r~~~l~~~~~~l~~~l~~l~~~i 118 (133)
T 1fxk_C 87 EDAMESIKSQKNELESTLQKMGENLRAITDIM 118 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444433
No 136
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=30.27 E-value=3e+02 Score=24.59 Aligned_cols=47 Identities=26% Similarity=0.441 Sum_probs=34.2
Q ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 230 NRDTIKKWRDIANDARKELYEREKEIQDLKQEILGLRQALKEANDQC 276 (956)
Q Consensus 230 n~~~i~k~k~~~~~~r~el~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~ 276 (956)
.+|..+-|+.+...-++-+++.-.+-.+|..+|..++.++..+...+
T Consensus 11 e~Pse~YWk~lAE~RR~AL~eaL~EN~~Lh~~ie~~~eEi~~LkeEN 57 (79)
T 2zxx_A 11 ENPSSQYWKEVAEQRRKALYEALKENEKLHKEIEQKDSEIARLRKEN 57 (79)
T ss_dssp CCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566778888888887777777777788888877777776655444
No 137
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=30.06 E-value=3.2e+02 Score=24.84 Aligned_cols=27 Identities=22% Similarity=0.320 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002175 250 EREKEIQDLKQEILGLRQALKEANDQC 276 (956)
Q Consensus 250 ~~~~eI~~Lq~EI~~Lk~~L~~~~~q~ 276 (956)
.+..++..|+.+=..|.++|..+....
T Consensus 8 ~l~~eL~~l~~eE~~L~~eL~~lEke~ 34 (96)
T 3q8t_A 8 QLQRELKELALEEERLIQELEDVEKNR 34 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 344555555555555555555544433
No 138
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=30.05 E-value=2.1e+02 Score=32.30 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=28.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 002175 390 DSSAVSKKLEEELKKRDALIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 390 d~s~l~kkLeEELkkree~LErL~eE~ekL~qrL~eK 426 (956)
......+.+.++++.+++++..+.++...+...|++.
T Consensus 72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~ 108 (425)
T 2dq3_A 72 EIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNL 108 (425)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3445567788888888888888888888888777776
No 139
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=29.80 E-value=3e+02 Score=24.51 Aligned_cols=22 Identities=14% Similarity=0.392 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002175 251 REKEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 251 ~~~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
.+.++..+..++..++..+...
T Consensus 12 ~eeEm~~~eeel~~lke~l~k~ 33 (89)
T 3bas_A 12 QEEEMKEQLKQMDKMKEDLAKT 33 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777777777777666543
No 140
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=29.33 E-value=2.5e+02 Score=23.51 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 328 LEQEQKMQIQQRDSTIKTLQAKINSIESQ 356 (956)
Q Consensus 328 ~eeElk~qlqe~e~eIe~LqeEik~LE~q 356 (956)
..+++..+..++..++..|+.++..|+.-
T Consensus 31 ~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 31 ECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444444444444444433
No 141
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=28.67 E-value=6.5e+02 Score=28.03 Aligned_cols=49 Identities=12% Similarity=0.091 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 314 QNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALH 362 (956)
Q Consensus 314 e~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~ 362 (956)
+...++.....+.+..++++...++.+..++.....+.+++.+++.++.
T Consensus 199 e~~~~~~n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lkp 247 (373)
T 3hhm_B 199 EIQRIMHNYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKP 247 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCh
Confidence 4445555555555555555555555555555555555555555554444
No 142
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=28.60 E-value=2.1e+02 Score=28.78 Aligned_cols=17 Identities=18% Similarity=0.356 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 002175 255 IQDLKQEILGLRQALKE 271 (956)
Q Consensus 255 I~~Lq~EI~~Lk~~L~~ 271 (956)
+..|+.++...+.++..
T Consensus 87 ~~~Lr~ql~akr~EL~a 103 (175)
T 3lay_A 87 TSALRQQLISKRYEYNA 103 (175)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444444443
No 143
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=27.87 E-value=1.1e+02 Score=23.55 Aligned_cols=28 Identities=18% Similarity=0.348 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 327 QLEQEQKMQIQQRDSTIKTLQAKINSIE 354 (956)
Q Consensus 327 ~~eeElk~qlqe~e~eIe~LqeEik~LE 354 (956)
++.+.+...+.+++.+|..|++++.+|.
T Consensus 7 ~ENekLhk~ie~KdeeIa~Lk~eN~eL~ 34 (37)
T 1t6f_A 7 KENEKLHKEIEQKDNEIARLKKENKELA 34 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 3445566777777888888888877664
No 144
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=27.84 E-value=3.2e+02 Score=24.28 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 246 KELYEREKEIQDLKQEILGLRQALKEANDQ 275 (956)
Q Consensus 246 ~el~~~~~eI~~Lq~EI~~Lk~~L~~~~~q 275 (956)
.++..+..++..++..+.............
T Consensus 14 eEm~~~eeel~~lke~l~k~e~~rkele~~ 43 (89)
T 3bas_A 14 EEMKEQLKQMDKMKEDLAKTERIKKELEEQ 43 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556666666665555554444433
No 145
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=27.82 E-value=3e+02 Score=23.95 Aligned_cols=39 Identities=28% Similarity=0.268 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhHHH
Q 002175 244 ARKELYEREKEIQDLKQEILGLRQALKEANDQCVLLYNE 282 (956)
Q Consensus 244 ~r~el~~~~~eI~~Lq~EI~~Lk~~L~~~~~q~~~l~~E 282 (956)
...+++..+.||.+|..-+..|+..|....+-+..+..+
T Consensus 8 L~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~ 46 (74)
T 2q6q_A 8 LNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQ 46 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556667777777777777777766554433333333
No 146
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=27.77 E-value=3.3e+02 Score=24.26 Aligned_cols=20 Identities=20% Similarity=0.370 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 335 QIQQRDSTIKTLQAKINSIE 354 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE 354 (956)
+..+.+..|..|+++.++|+
T Consensus 54 E~~~l~~ni~~lk~K~~EL~ 73 (78)
T 3iv1_A 54 EVAEVDKNIELLKKKDEELS 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444443
No 147
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=27.62 E-value=1.9e+02 Score=25.82 Aligned_cols=71 Identities=17% Similarity=0.222 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccCCCCccccccccccccccChhHHHHHHHHHHH
Q 002175 324 QLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEVRSTIRSEPMPAVSSVLRTTGDGMDSSAVSKKLEEELK 403 (956)
Q Consensus 324 ~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~rs~~~~es~~~s~s~~k~~ee~~d~s~l~kkLeEELk 403 (956)
++....++...+++..+.+...|+..+..++.++++.+.+-.. +..+++
T Consensus 3 ~l~~e~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~-------------------------------~~~Elk 51 (79)
T 3cvf_A 3 HMAAEREETQQKVQDLETRNAELEHQLRAMERSLEEARAERER-------------------------------ARAEVG 51 (79)
T ss_dssp -------CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------------HHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH-------------------------------HHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh
Q 002175 404 KRDALIERLHEENEKLFDRLTE 425 (956)
Q Consensus 404 kree~LErL~eE~ekL~qrL~e 425 (956)
..-+.+--.-.|...+++-|..
T Consensus 52 ~l~e~Ld~KI~eL~elRqgLak 73 (79)
T 3cvf_A 52 RAAQLLDVSLFELSELREGLAR 73 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHH
No 148
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=27.27 E-value=3.3e+02 Score=24.16 Aligned_cols=22 Identities=5% Similarity=0.093 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002175 336 IQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 336 lqe~e~eIe~LqeEik~LE~qL 357 (956)
+...+.++..++.++..++..+
T Consensus 81 i~~le~~~~~~~~~l~~lk~~l 102 (107)
T 1fxk_A 81 EKTIERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444444443
No 149
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=26.57 E-value=4e+02 Score=30.44 Aligned_cols=37 Identities=11% Similarity=0.092 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002175 330 QEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEV 366 (956)
Q Consensus 330 eElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~ 366 (956)
++++.+..+...+++.+++++..++.++.+.....-+
T Consensus 72 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN 108 (455)
T 2dq0_A 72 DELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPN 108 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3456667777778888888888888888776665443
No 150
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=26.56 E-value=1.8e+02 Score=32.64 Aligned_cols=43 Identities=16% Similarity=0.221 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 311 EKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSI 353 (956)
Q Consensus 311 ~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~L 353 (956)
++++...|+..+.++....++++.++.+.+.....|..++.++
T Consensus 15 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~el 57 (403)
T 4etp_A 15 LKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQEL 57 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3333444444444444444444444444444444444444444
No 151
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=26.08 E-value=2e+02 Score=22.82 Aligned_cols=34 Identities=12% Similarity=0.106 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 324 QLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 324 ~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL 357 (956)
.++....++.....+.+.++..|+.|+..|+.-+
T Consensus 7 eLE~r~k~le~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 7 ELENRVKDLENKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 3344444455555555666666666666555433
No 152
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=25.55 E-value=2.6e+02 Score=26.80 Aligned_cols=40 Identities=15% Similarity=0.133 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhh
Q 002175 323 AQLLQLEQEQKMQIQQRDSTIKTL---QAKINSIESQRNEALH 362 (956)
Q Consensus 323 ~~l~~~eeElk~qlqe~e~eIe~L---qeEik~LE~qL~el~~ 362 (956)
.++....+.++.+++.....+..+ +.++.+++.-++.+..
T Consensus 12 ~ql~~~~qql~~~~~~l~~~~~~L~~a~~~~~e~~~~l~~l~~ 54 (151)
T 2zdi_C 12 EKLAYEYQVLQAQAQILAQNLELLNLAKAEVQTVRETLENLKK 54 (151)
T ss_dssp HHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333344445555555555566 6666666666665444
No 153
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=25.23 E-value=4.2e+02 Score=24.63 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 302 YMLADKHKIEKEQNAQLRNQ 321 (956)
Q Consensus 302 ~~Leek~k~~kee~~qLq~q 321 (956)
..++.....+++++..|+..
T Consensus 40 l~LE~~~s~le~e~~rlr~~ 59 (104)
T 3s9g_A 40 LELEKSLSRMEDENNRLRLE 59 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444445555555555554
No 154
>3tul_A Cell invasion protein SIPB; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.79A {Salmonella enterica subsp}
Probab=25.07 E-value=3.4e+02 Score=26.83 Aligned_cols=23 Identities=9% Similarity=0.154 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 002175 335 QIQQRDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE~qL 357 (956)
.+...++.++.++.++..++.+|
T Consensus 70 n~~sA~~~~d~lekKl~~aq~kL 92 (158)
T 3tul_A 70 KTDTAKSVYDAATKKLTQAQNKL 92 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHH
Confidence 33444566666666666666665
No 155
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=24.89 E-value=97 Score=23.80 Aligned_cols=29 Identities=34% Similarity=0.583 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 393 AVSKKLEEELKKRDALIERLHEENEKLFD 421 (956)
Q Consensus 393 ~l~kkLeEELkkree~LErL~eE~ekL~q 421 (956)
....+|-.+|..++++|.+|.+||+.|..
T Consensus 7 ~ENekLhk~ie~KdeeIa~Lk~eN~eL~E 35 (37)
T 1t6f_A 7 KENEKLHKEIEQKDNEIARLKKENKELAE 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 34678889999999999999999998753
No 156
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=24.78 E-value=2.6e+02 Score=22.91 Aligned_cols=37 Identities=11% Similarity=0.274 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 317 QLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSI 353 (956)
Q Consensus 317 qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~L 353 (956)
.|+.++..+...++.+...+.+...+|..|.++++.+
T Consensus 13 ~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 13 QLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444454444445555555555555555555443
No 157
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=24.38 E-value=2.5e+02 Score=24.67 Aligned_cols=49 Identities=8% Similarity=0.011 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 002175 317 QLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSE 365 (956)
Q Consensus 317 qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~ 365 (956)
.+..++..++.....+...+++....+...+.+|..|+.++..+.....
T Consensus 11 ~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~ 59 (78)
T 3efg_A 11 ELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLG 59 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666555566666666666666666666666666665555443
No 158
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=23.87 E-value=3.6e+02 Score=30.82 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 002175 392 SAVSKKLEEELKKRDALIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 392 s~l~kkLeEELkkree~LErL~eE~ekL~qrL~eK 426 (956)
....+.+.++++.+++++..+.++...+...|++-
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~ 109 (455)
T 2dq0_A 75 LAKSREIVKRIGELENEVEELKKKIDYYLWRLPNI 109 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 34445556666666666665555555555555544
No 159
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=23.77 E-value=3.7e+02 Score=23.74 Aligned_cols=29 Identities=17% Similarity=0.362 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 243 DARKELYEREKEIQDLKQEILGLRQALKE 271 (956)
Q Consensus 243 ~~r~el~~~~~eI~~Lq~EI~~Lk~~L~~ 271 (956)
...++++.+...|..|..++..|..++..
T Consensus 19 keqrEle~le~~Ie~LE~~i~~le~~lad 47 (89)
T 2lw1_A 19 KLQRELEQLPQLLEDLEAKLEALQTQVAD 47 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34556677777777777777777777754
No 160
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=23.50 E-value=6.7e+02 Score=29.05 Aligned_cols=37 Identities=14% Similarity=-0.009 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002175 330 QEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEV 366 (956)
Q Consensus 330 eElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~ 366 (956)
++++.+..+...+++.+++++.+++.++.+.....-+
T Consensus 119 ~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l~~iPN 155 (501)
T 1wle_A 119 QSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPN 155 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3566677777888888888888888888776665433
No 161
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=22.90 E-value=3.8e+02 Score=31.08 Aligned_cols=35 Identities=14% Similarity=0.045 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 002175 392 SAVSKKLEEELKKRDALIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 392 s~l~kkLeEELkkree~LErL~eE~ekL~qrL~eK 426 (956)
....+.+.++++.+++++.++.++...+...|++-
T Consensus 77 ~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~ 111 (485)
T 3qne_A 77 IAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNI 111 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 33444555666666666665555555555555444
No 162
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=22.85 E-value=3.2e+02 Score=22.49 Aligned_cols=27 Identities=11% Similarity=0.169 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 330 QEQKMQIQQRDSTIKTLQAKINSIESQ 356 (956)
Q Consensus 330 eElk~qlqe~e~eIe~LqeEik~LE~q 356 (956)
..+..+......++..|+.++..|+..
T Consensus 32 ~~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 32 EDLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444445555555444443
No 163
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=22.81 E-value=1.7e+02 Score=32.25 Aligned_cols=20 Identities=15% Similarity=0.217 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 335 QIQQRDSTIKTLQAKINSIE 354 (956)
Q Consensus 335 qlqe~e~eIe~LqeEik~LE 354 (956)
.+...+.+|+.|+.++..++
T Consensus 34 ~l~~~~~~i~~l~~~i~~l~ 53 (323)
T 1lwu_C 34 MWRVNQQFVTRLQQQLVDIR 53 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444443
No 164
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=22.60 E-value=4.2e+02 Score=24.60 Aligned_cols=48 Identities=10% Similarity=0.338 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 002175 318 LRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSE 365 (956)
Q Consensus 318 Lq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~ 365 (956)
|...+..+......++..-.....++.+|+.++..|..+...+...+.
T Consensus 42 LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e~~ 89 (104)
T 3s9g_A 42 LEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTENE 89 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444444445556666677777777666666655544
No 165
>2zq5_A Putative uncharacterized protein; sulfotransferase fold; 2.00A {Mycobacterium tuberculosis}
Probab=22.52 E-value=48 Score=36.44 Aligned_cols=76 Identities=26% Similarity=0.434 Sum_probs=45.6
Q ss_pred hhhCCCCcc--c-cchhhhccchhhHHHHHHHHHHHhccchhHHHHHHHhhhHHHHHHhcCccchhhhhhhhhhhhHHHH
Q 002175 501 ALNDFNPEQ--Y-DNLAVISDGANKLLMLVLAAVIKAGASREHEILAEIRDAVFAFIRKMEPTRVMDTMLVSRVRILYIR 577 (956)
Q Consensus 501 ~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (956)
.|.||.+|. | |+++..-++.+. .||.+.. =+-.+|.+|. ..|+.|.+ +.
T Consensus 25 gl~d~g~~~~~~~~~l~~l~~~~~~----------~~~l~~~------g~~~~~~~~~---------~~l~~rl~---~~ 76 (384)
T 2zq5_A 25 GLDDFGTDDDNYREALGVLLDAYQG----------EAGLTVL------GSKMNRFFLR---------GALVARLL---SQ 76 (384)
T ss_dssp CCCCCCCSTTCHHHHHHHHHHHHHH----------HSCBCHH------HHHHHHHHHH---------HHHHHHHH---HH
T ss_pred CCCCCCCCchhHHHHHHHHHHHHHh----------hccCCHH------HHHHHHHHHH---------HHHHHHHH---HH
Confidence 389999986 5 666654444333 3443321 2223343332 35788887 56
Q ss_pred HhhhcCcccccccc-CcchhhhhccCCCCCCC
Q 002175 578 SLLARSPELQSIMV-SPVECFLEKSNTGRSRS 608 (956)
Q Consensus 578 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 608 (956)
..+.+.||+..+.+ .|| |+ .+.+||.+
T Consensus 77 ~~~~~~pei~~~~~~~PI--FI--~G~PRSGT 104 (384)
T 2zq5_A 77 SAWKQYPEHVDVAIKRPI--FV--TGLVRTGT 104 (384)
T ss_dssp HHHHHCGGGGGCCCCSCE--EE--ECCTTSSH
T ss_pred HHHHhCccccccccCCCe--EE--eCCCCCch
Confidence 77889999998887 466 75 44445443
No 166
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=22.34 E-value=4e+02 Score=30.94 Aligned_cols=20 Identities=30% Similarity=0.542 Sum_probs=12.5
Q ss_pred hccCChhh---hHHHHHHHHhhcc
Q 002175 687 FVHTPAGE---LQRQIRSWLAENF 707 (956)
Q Consensus 687 ~~~~~~~~---~~~~~~~~~~~~~ 707 (956)
||||+-|- +-|-|-. |-|||
T Consensus 429 ~vHtlngSglav~R~l~a-lLEn~ 451 (501)
T 1wle_A 429 FAHTVNATGCAVPRLLIA-LLESY 451 (501)
T ss_dssp ECEEEEEEEEEHHHHHHH-HHHHH
T ss_pred EEEEECCccchHHHHHHH-HHHhC
Confidence 77777776 5666644 34555
No 167
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=22.19 E-value=3e+02 Score=28.22 Aligned_cols=28 Identities=14% Similarity=0.240 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 245 RKELYEREKEIQDLKQEILGLRQALKEA 272 (956)
Q Consensus 245 r~el~~~~~eI~~Lq~EI~~Lk~~L~~~ 272 (956)
..+++.....|..|+.|+..|.+++...
T Consensus 12 q~ql~~ad~LV~~L~~En~~L~~ql~~k 39 (190)
T 4emc_A 12 KQQIDSADLLVANLVNENFVLSEKLDTK 39 (190)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566677888888888888777754
No 168
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=21.66 E-value=5.3e+02 Score=24.60 Aligned_cols=13 Identities=38% Similarity=0.468 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHH
Q 002175 254 EIQDLKQEILGLR 266 (956)
Q Consensus 254 eI~~Lq~EI~~Lk 266 (956)
+++.|..++..|.
T Consensus 10 ~l~~LEaeyq~L~ 22 (119)
T 2avr_X 10 ELQALDAEYQNLA 22 (119)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3444444444443
No 169
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=21.63 E-value=5.7e+02 Score=24.92 Aligned_cols=19 Identities=5% Similarity=0.279 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 002175 339 RDSTIKTLQAKINSIESQR 357 (956)
Q Consensus 339 ~e~eIe~LqeEik~LE~qL 357 (956)
.+.+|..|+.++..+-..+
T Consensus 99 aE~k~~eLEeeL~~~~~nl 117 (147)
T 2b9c_A 99 SEGKCAELEEELKTVTNNL 117 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444433333
No 170
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=21.17 E-value=5e+02 Score=24.09 Aligned_cols=20 Identities=10% Similarity=0.355 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002175 251 REKEIQDLKQEILGLRQALK 270 (956)
Q Consensus 251 ~~~eI~~Lq~EI~~Lk~~L~ 270 (956)
++.++..+...+..++..+.
T Consensus 13 l~~~~~~l~~~~~~l~~~i~ 32 (133)
T 1fxk_C 13 YQSQVELIQQQMEAVRATIS 32 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33334444444444433333
No 171
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=20.87 E-value=5e+02 Score=24.03 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=15.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 002175 338 QRDSTIKTLQAKINSIESQRNE 359 (956)
Q Consensus 338 e~e~eIe~LqeEik~LE~qL~e 359 (956)
+.+..++.|+.+++.|+..+..
T Consensus 72 ~~~~~~e~Lq~E~erLr~~v~~ 93 (100)
T 1go4_E 72 RLREDHSQLQAECERLRGLLRA 93 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777777888777777643
No 172
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=20.82 E-value=2.1e+02 Score=32.34 Aligned_cols=13 Identities=31% Similarity=0.370 Sum_probs=6.9
Q ss_pred HhhhHHHHHHhcC
Q 002175 546 IRDAVFAFIRKME 558 (956)
Q Consensus 546 ~~~~~~~~~~~~~ 558 (956)
+=+.+|..|..+.
T Consensus 169 ~~~~lF~~i~~~~ 181 (412)
T 3u06_A 169 TVDLLFDSIRGYR 181 (412)
T ss_dssp HHHHHHHHHHHHG
T ss_pred HHHHHHHhhhhhc
Confidence 3345576666543
No 173
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=20.81 E-value=3.9e+02 Score=22.69 Aligned_cols=17 Identities=6% Similarity=0.153 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q 002175 341 STIKTLQAKINSIESQR 357 (956)
Q Consensus 341 ~eIe~LqeEik~LE~qL 357 (956)
.+|.++...++.|+.++
T Consensus 56 ~Ei~elrr~iq~L~~el 72 (77)
T 3trt_A 56 QESTEYRRQVQSLTMEV 72 (77)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333444444444333
No 174
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=20.60 E-value=6.5e+02 Score=25.21 Aligned_cols=30 Identities=10% Similarity=0.114 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 002175 394 VSKKLEEELKKRDALIERLHEENEKLFDRLTEK 426 (956)
Q Consensus 394 l~kkLeEELkkree~LErL~eE~ekL~qrL~eK 426 (956)
..+++..++.+++.++. .++-+.+.++...
T Consensus 114 kI~aL~~Ei~~Lr~qL~---~~R~k~~~em~Ke 143 (175)
T 3lay_A 114 KINAVAKEMESLGQKLD---EQRVKRDVAMAQA 143 (175)
T ss_dssp HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHHHHHHHh
Confidence 34566667777666666 4555566666444
No 175
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=20.31 E-value=5.1e+02 Score=26.54 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002175 303 MLADKHKIEKEQNAQLRNQVAQLLQ 327 (956)
Q Consensus 303 ~Leek~k~~kee~~qLq~ql~~l~~ 327 (956)
.+..+......++..|++++..++.
T Consensus 31 ~L~~ql~~k~~ei~~L~~ql~sl~~ 55 (190)
T 4emc_A 31 VLSEKLDTKATEIKQLQKQIDSLNA 55 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333444444455555444443
No 176
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=20.20 E-value=5.9e+02 Score=24.54 Aligned_cols=10 Identities=30% Similarity=0.322 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 002175 257 DLKQEILGLR 266 (956)
Q Consensus 257 ~Lq~EI~~Lk 266 (956)
.|+.++..+.
T Consensus 33 ~Lk~e~e~l~ 42 (155)
T 2oto_A 33 DLKARLENAM 42 (155)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3444444333
No 177
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=20.03 E-value=1.1e+03 Score=27.60 Aligned_cols=127 Identities=9% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHhhhHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 002175 292 TLQSDLKSENYMLADK-----HKIEKEQNAQLRNQVAQLLQLEQEQKMQIQQRDSTIKTLQAKINSIESQRNEALHSSEV 366 (956)
Q Consensus 292 eLE~eL~~e~~~Leek-----~k~~kee~~qLq~ql~~l~~~eeElk~qlqe~e~eIe~LqeEik~LE~qL~el~~s~~~ 366 (956)
++.++.++++..-.+. ....+.+.++.+..+.+.......++..+.....-+..+..++...-.++.+.+...+.
T Consensus 295 elkqrqeee~r~~qew~~~hp~~~Aer~~e~a~ael~~a~k~~a~~~er~~~t~~~~~~~~~~~~~~n~~~~~~~~~~~~ 374 (551)
T 2b5u_A 295 QVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIKQ 374 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhhHHHHHHHhhhh
Q ss_pred cccccCCCCccccccccccccccChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002175 367 RSTIRSEPMPAVSSVLRTTGDGMDSSAVSKKLEEELKKRDALIERLHEENEKLFDRLT 424 (956)
Q Consensus 367 rs~~~~es~~~s~s~~k~~ee~~d~s~l~kkLeEELkkree~LErL~eE~ekL~qrL~ 424 (956)
..+...++....-++-.... --.+..+++++.+++....+.+|...-...|.
T Consensus 375 f~~~n~~p~~~Gh~~w~~~~------~~~~~~~~dv~~~~a~~d~~~~~~s~~~~~ls 426 (551)
T 2b5u_A 375 FNRFAHDPMAGGHRMWQMAG------LKAQRAQTDVNNKQAAFDAAAKEKSDADAALS 426 (551)
T ss_dssp HGGGTTCTTSTHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhccChhhccchhhhhcc------chhhhhhhhhhhHHHHHHHHhhcccchhhhhh
Done!