Query 002176
Match_columns 956
No_of_seqs 567 out of 3687
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 18:14:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002176.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002176hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0205 Plasma membrane H+-tra 100.0 4E-202 8E-207 1654.8 49.5 942 1-956 1-942 (942)
2 KOG0202 Ca2+ transporting ATPa 100.0 1E-143 3E-148 1227.9 58.6 829 16-853 2-970 (972)
3 TIGR01647 ATPase-IIIA_H plasma 100.0 3E-134 7E-139 1235.6 85.4 751 36-811 1-754 (755)
4 PRK10517 magnesium-transportin 100.0 6E-133 1E-137 1237.7 88.6 808 16-853 47-899 (902)
5 PRK15122 magnesium-transportin 100.0 3E-132 6E-137 1234.2 89.8 815 16-853 25-899 (903)
6 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-132 6E-137 1246.3 88.0 824 14-853 3-1049(1053)
7 COG0474 MgtA Cation transport 100.0 8E-133 2E-137 1240.7 78.7 777 14-806 19-867 (917)
8 TIGR01524 ATPase-IIIB_Mg magne 100.0 3E-131 7E-136 1223.4 89.8 807 16-853 13-864 (867)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 3E-126 7E-131 1195.6 90.0 836 14-852 13-986 (997)
10 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-125 4E-130 1179.1 89.9 799 16-851 2-882 (884)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 2E-124 5E-129 1176.0 89.7 816 22-848 43-938 (941)
12 KOG0204 Calcium transporting A 100.0 5E-123 1E-127 1057.1 49.6 813 22-848 102-1005(1034)
13 TIGR01116 ATPase-IIA1_Ca sarco 100.0 4E-116 8E-121 1097.4 82.1 782 65-850 1-917 (917)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-118 4E-123 1018.3 32.2 849 6-858 26-1012(1019)
15 TIGR01657 P-ATPase-V P-type AT 100.0 2E-113 5E-118 1085.8 74.7 737 34-788 137-1003(1054)
16 TIGR01652 ATPase-Plipid phosph 100.0 1E-100 2E-105 973.0 68.4 785 49-854 1-1049(1057)
17 PRK14010 potassium-transportin 100.0 6.2E-98 1E-102 886.7 57.1 545 67-669 28-588 (673)
18 PLN03190 aminophospholipid tra 100.0 2.1E-95 5E-100 915.2 70.5 781 48-855 86-1145(1178)
19 PRK01122 potassium-transportin 100.0 6.3E-94 1.4E-98 853.2 61.7 537 66-658 28-581 (679)
20 KOG0208 Cation transport ATPas 100.0 1.8E-91 3.8E-96 808.9 50.1 651 25-690 149-955 (1140)
21 TIGR01497 kdpB K+-transporting 100.0 2.3E-89 5E-94 812.1 59.8 542 67-663 28-587 (675)
22 COG2217 ZntA Cation transport 100.0 8.7E-86 1.9E-90 782.7 57.7 504 98-665 175-680 (713)
23 PRK11033 zntA zinc/cadmium/mer 100.0 1.8E-80 3.8E-85 758.8 59.9 499 96-662 205-706 (741)
24 KOG0206 P-type ATPase [General 100.0 1.2E-83 2.6E-88 781.4 26.1 798 45-861 28-1086(1151)
25 KOG0207 Cation transport ATPas 100.0 7.1E-81 1.5E-85 722.7 39.2 541 95-690 338-891 (951)
26 TIGR01494 ATPase_P-type ATPase 100.0 2.1E-78 4.6E-83 717.0 53.9 474 104-665 3-482 (499)
27 TIGR01512 ATPase-IB2_Cd heavy 100.0 8.4E-77 1.8E-81 705.8 54.6 498 76-662 4-504 (536)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 4.5E-76 9.9E-81 703.7 58.9 516 77-663 5-526 (556)
29 TIGR01511 ATPase-IB1_Cu copper 100.0 8.4E-76 1.8E-80 699.5 58.8 506 96-678 53-560 (562)
30 PRK10671 copA copper exporting 100.0 1.4E-74 3E-79 720.3 60.6 528 98-689 287-818 (834)
31 KOG0209 P-type ATPase [Inorgan 100.0 1.5E-74 3.4E-79 653.7 48.0 572 21-610 148-832 (1160)
32 KOG0210 P-type ATPase [Inorgan 100.0 9.2E-74 2E-78 636.6 43.4 768 44-857 74-1046(1051)
33 COG2216 KdpB High-affinity K+ 100.0 6.6E-64 1.4E-68 545.6 35.1 520 68-643 29-568 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.6E-35 5.6E-40 314.7 23.9 219 103-323 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 1.9E-26 4.2E-31 242.6 10.1 211 327-604 1-215 (215)
36 COG4087 Soluble P-type ATPase 99.6 2.4E-15 5.2E-20 138.3 10.8 123 482-635 20-145 (152)
37 PF00690 Cation_ATPase_N: Cati 99.4 4.9E-13 1.1E-17 114.6 7.1 67 18-84 1-69 (69)
38 KOG4383 Uncharacterized conser 99.3 1.8E-08 3.9E-13 114.7 39.6 208 481-688 815-1129(1354)
39 smart00831 Cation_ATPase_N Cat 99.1 2.1E-10 4.6E-15 96.7 7.0 59 29-87 2-62 (64)
40 PF00689 Cation_ATPase_C: Cati 99.1 2.4E-09 5.1E-14 110.2 15.1 167 672-848 1-182 (182)
41 TIGR02137 HSK-PSP phosphoserin 99.0 2.8E-09 6.1E-14 111.4 11.5 131 492-639 68-198 (203)
42 PRK11133 serB phosphoserine ph 98.9 8.8E-09 1.9E-13 114.9 10.5 130 492-636 181-315 (322)
43 TIGR00338 serB phosphoserine p 98.8 9E-09 1.9E-13 109.0 9.9 129 492-635 85-218 (219)
44 TIGR02726 phenyl_P_delta pheny 98.7 6.3E-08 1.4E-12 97.9 9.4 100 499-628 41-142 (169)
45 PRK01158 phosphoglycolate phos 98.7 1.1E-07 2.5E-12 101.3 11.4 148 490-637 17-226 (230)
46 PF13246 Hydrolase_like2: Puta 98.7 3.7E-08 8E-13 89.2 6.3 65 374-439 20-90 (91)
47 TIGR01670 YrbI-phosphatas 3-de 98.7 1.1E-07 2.3E-12 95.2 10.2 109 500-636 36-148 (154)
48 TIGR01487 SPP-like sucrose-pho 98.6 8E-08 1.7E-12 101.6 9.5 144 492-635 18-214 (215)
49 COG0560 SerB Phosphoserine pho 98.6 1.5E-07 3.2E-12 99.0 9.8 119 491-624 76-199 (212)
50 PRK10513 sugar phosphate phosp 98.6 3.2E-07 6.9E-12 100.5 11.9 53 585-637 213-265 (270)
51 COG0561 Cof Predicted hydrolas 98.6 5.5E-07 1.2E-11 98.3 13.0 154 485-638 12-259 (264)
52 PRK13582 thrH phosphoserine ph 98.5 6E-07 1.3E-11 94.0 11.5 127 492-636 68-195 (205)
53 TIGR01482 SPP-subfamily Sucros 98.5 6.9E-07 1.5E-11 94.9 11.0 140 492-631 15-212 (225)
54 PRK15126 thiamin pyrimidine py 98.5 1.8E-06 3.9E-11 94.8 13.9 65 572-636 188-258 (272)
55 PRK09484 3-deoxy-D-manno-octul 98.4 8E-07 1.7E-11 91.5 9.4 110 499-640 55-172 (183)
56 PRK10976 putative hydrolase; P 98.4 1.6E-06 3.4E-11 94.8 12.0 65 573-637 191-261 (266)
57 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 8.6E-07 1.9E-11 92.3 8.8 117 492-621 80-200 (201)
58 PRK08238 hypothetical protein; 98.3 0.00014 3E-09 85.6 26.6 101 492-617 72-172 (479)
59 PLN02887 hydrolase family prot 98.3 2.9E-06 6.2E-11 101.5 12.7 52 586-637 525-576 (580)
60 PF08282 Hydrolase_3: haloacid 98.3 2.1E-06 4.6E-11 92.0 10.2 143 491-636 14-254 (254)
61 PF12710 HAD: haloacid dehalog 98.3 8.5E-07 1.8E-11 91.6 6.3 92 495-601 92-192 (192)
62 PRK10530 pyridoxal phosphate ( 98.3 4.1E-06 8.9E-11 91.7 11.8 66 572-637 199-268 (272)
63 TIGR03333 salvage_mtnX 2-hydro 98.3 5E-06 1.1E-10 87.9 11.2 134 491-636 69-208 (214)
64 TIGR01486 HAD-SF-IIB-MPGP mann 98.2 1E-05 2.2E-10 88.0 13.3 54 584-637 194-253 (256)
65 KOG1615 Phosphoserine phosphat 98.2 2.4E-06 5.1E-11 85.1 7.2 110 492-610 88-199 (227)
66 PLN02954 phosphoserine phospha 98.2 1.5E-05 3.2E-10 84.7 12.0 131 492-634 84-221 (224)
67 TIGR00099 Cof-subfamily Cof su 98.1 8.4E-06 1.8E-10 88.6 10.0 64 572-635 188-255 (256)
68 PRK03669 mannosyl-3-phosphogly 98.1 3.3E-05 7.2E-10 84.7 13.0 53 585-637 207-265 (271)
69 COG1778 Low specificity phosph 98.1 8.6E-06 1.9E-10 78.7 7.1 113 500-644 43-163 (170)
70 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.5E-05 3.2E-10 82.0 9.0 113 491-608 71-186 (188)
71 PRK00192 mannosyl-3-phosphogly 98.0 4.3E-05 9.4E-10 83.9 13.1 66 572-637 190-267 (273)
72 TIGR01488 HAD-SF-IB Haloacid D 98.0 1E-05 2.2E-10 82.4 6.7 101 492-603 73-177 (177)
73 PRK09552 mtnX 2-hydroxy-3-keto 98.0 2.9E-05 6.4E-10 82.3 9.8 132 492-636 74-212 (219)
74 PRK13222 phosphoglycolate phos 97.9 7.1E-05 1.5E-09 79.4 11.5 125 491-638 92-223 (226)
75 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.9 3E-05 6.5E-10 80.9 7.9 108 490-610 85-197 (202)
76 COG0546 Gph Predicted phosphat 97.7 0.00025 5.4E-09 75.3 11.0 126 490-636 87-217 (220)
77 TIGR01454 AHBA_synth_RP 3-amin 97.6 0.00023 5E-09 74.6 10.1 124 492-636 75-203 (205)
78 cd01427 HAD_like Haloacid deha 97.6 0.00013 2.7E-09 69.9 7.3 118 488-608 20-138 (139)
79 PRK13223 phosphoglycolate phos 97.4 0.00078 1.7E-08 74.0 10.4 125 491-636 100-229 (272)
80 PRK13288 pyrophosphatase PpaX; 97.3 0.00092 2E-08 70.5 9.7 124 492-636 82-210 (214)
81 TIGR01485 SPP_plant-cyano sucr 97.3 0.00066 1.4E-08 73.5 8.7 147 491-637 20-244 (249)
82 TIGR02461 osmo_MPG_phos mannos 97.3 0.00094 2E-08 71.2 9.6 43 490-532 13-55 (225)
83 TIGR01449 PGP_bact 2-phosphogl 97.2 0.0011 2.4E-08 69.7 8.9 120 492-634 85-211 (213)
84 TIGR02471 sucr_syn_bact_C sucr 97.1 0.00064 1.4E-08 72.9 5.6 66 572-637 159-232 (236)
85 TIGR02463 MPGP_rel mannosyl-3- 97.0 0.0034 7.3E-08 66.5 10.5 39 494-532 18-56 (221)
86 PRK10826 2-deoxyglucose-6-phos 97.0 0.0015 3.3E-08 69.3 7.6 122 491-633 91-216 (222)
87 TIGR01544 HAD-SF-IE haloacid d 97.0 0.0079 1.7E-07 65.5 12.3 128 491-637 120-274 (277)
88 TIGR03351 PhnX-like phosphonat 96.9 0.0038 8.2E-08 66.0 9.7 125 491-634 86-217 (220)
89 PRK10187 trehalose-6-phosphate 96.9 0.0022 4.8E-08 70.2 7.6 138 492-635 36-239 (266)
90 PRK13226 phosphoglycolate phos 96.9 0.004 8.8E-08 66.5 9.5 123 492-635 95-223 (229)
91 PRK11590 hypothetical protein; 96.8 0.0049 1.1E-07 65.0 9.3 106 492-611 95-203 (211)
92 TIGR01422 phosphonatase phosph 96.8 0.008 1.7E-07 65.2 10.8 97 492-606 99-196 (253)
93 TIGR01545 YfhB_g-proteo haloac 96.7 0.005 1.1E-07 64.9 8.7 106 492-610 94-201 (210)
94 PRK13225 phosphoglycolate phos 96.7 0.014 3E-07 64.1 11.8 121 492-636 142-267 (273)
95 PLN03243 haloacid dehalogenase 96.6 0.011 2.4E-07 64.4 10.2 120 492-632 109-230 (260)
96 PRK13478 phosphonoacetaldehyde 96.6 0.015 3.2E-07 63.7 11.2 97 492-606 101-198 (267)
97 TIGR01548 HAD-SF-IA-hyp1 haloa 96.5 0.0041 8.9E-08 64.7 5.7 94 490-603 104-197 (197)
98 PRK11009 aphA acid phosphatase 96.4 0.0074 1.6E-07 64.5 7.4 92 492-609 114-210 (237)
99 PLN02770 haloacid dehalogenase 96.3 0.02 4.2E-07 62.0 10.3 116 492-626 108-227 (248)
100 PRK14502 bifunctional mannosyl 96.3 0.019 4E-07 69.4 10.8 48 485-532 425-473 (694)
101 PRK12702 mannosyl-3-phosphogly 96.3 0.025 5.5E-07 61.7 10.7 43 491-533 17-59 (302)
102 PLN02382 probable sucrose-phos 96.2 0.0055 1.2E-07 71.2 5.6 65 572-636 175-256 (413)
103 PRK06698 bifunctional 5'-methy 96.1 0.017 3.8E-07 68.3 9.1 123 492-638 330-455 (459)
104 TIGR01484 HAD-SF-IIB HAD-super 96.1 0.02 4.4E-07 59.7 8.5 39 492-530 17-55 (204)
105 PRK11587 putative phosphatase; 96.1 0.024 5.2E-07 60.0 9.1 114 492-625 83-198 (218)
106 TIGR02253 CTE7 HAD superfamily 96.0 0.019 4.2E-07 60.6 8.3 99 492-611 94-196 (221)
107 PHA02530 pseT polynucleotide k 96.0 0.018 3.9E-07 64.1 8.0 109 488-607 183-292 (300)
108 TIGR01672 AphA HAD superfamily 95.9 0.016 3.4E-07 62.1 6.8 92 492-609 114-210 (237)
109 PRK14501 putative bifunctional 95.9 0.068 1.5E-06 67.0 13.3 170 448-636 481-720 (726)
110 PRK08942 D,D-heptose 1,7-bisph 95.8 0.05 1.1E-06 55.8 9.8 127 492-636 29-176 (181)
111 PRK06769 hypothetical protein; 95.7 0.034 7.3E-07 56.7 8.1 98 493-608 29-134 (173)
112 COG4030 Uncharacterized protei 95.7 0.071 1.5E-06 55.0 9.8 145 492-637 83-262 (315)
113 TIGR01428 HAD_type_II 2-haloal 95.6 0.032 6.8E-07 58.0 7.6 94 492-606 92-187 (198)
114 TIGR01662 HAD-SF-IIIA HAD-supe 95.6 0.036 7.9E-07 53.5 7.5 91 492-605 25-125 (132)
115 PLN02575 haloacid dehalogenase 95.6 0.073 1.6E-06 60.8 10.8 120 492-632 216-337 (381)
116 TIGR01990 bPGM beta-phosphoglu 95.3 0.025 5.4E-07 57.8 5.5 94 492-606 87-180 (185)
117 PF13419 HAD_2: Haloacid dehal 95.3 0.017 3.6E-07 57.9 4.0 97 491-606 76-172 (176)
118 TIGR02254 YjjG/YfnB HAD superf 95.3 0.056 1.2E-06 57.0 8.2 119 492-634 97-222 (224)
119 PLN02779 haloacid dehalogenase 95.3 0.065 1.4E-06 59.3 8.8 120 492-631 144-267 (286)
120 COG4359 Uncharacterized conser 95.2 0.043 9.2E-07 54.9 6.2 111 492-608 73-183 (220)
121 PRK14988 GMP/IMP nucleotidase; 95.0 0.06 1.3E-06 57.3 7.5 99 492-611 93-195 (224)
122 TIGR01509 HAD-SF-IA-v3 haloaci 94.9 0.076 1.7E-06 53.9 7.7 94 492-605 85-178 (183)
123 TIGR02009 PGMB-YQAB-SF beta-ph 94.7 0.047 1E-06 55.8 5.5 92 492-606 88-181 (185)
124 PRK09449 dUMP phosphatase; Pro 94.4 0.15 3.3E-06 53.9 8.8 121 492-636 95-222 (224)
125 PF05116 S6PP: Sucrose-6F-phos 94.3 0.14 3.1E-06 55.3 8.3 45 571-615 164-212 (247)
126 TIGR01685 MDP-1 magnesium-depe 94.2 0.11 2.4E-06 52.9 6.8 110 484-609 37-155 (174)
127 PLN02940 riboflavin kinase 94.2 0.13 2.8E-06 59.4 8.1 114 492-624 93-210 (382)
128 PTZ00174 phosphomannomutase; P 94.1 0.036 7.9E-07 59.9 3.3 54 571-624 187-245 (247)
129 TIGR01656 Histidinol-ppas hist 94.1 0.093 2E-06 51.9 5.9 97 492-606 27-140 (147)
130 TIGR01668 YqeG_hyp_ppase HAD s 94.0 0.28 6E-06 49.8 9.2 108 454-606 20-131 (170)
131 PLN02580 trehalose-phosphatase 93.9 0.48 1E-05 54.2 11.8 67 566-636 292-373 (384)
132 smart00775 LNS2 LNS2 domain. T 93.8 0.33 7.2E-06 48.7 9.1 102 490-605 25-140 (157)
133 TIGR00213 GmhB_yaeD D,D-heptos 93.8 0.26 5.7E-06 50.2 8.7 124 493-632 27-174 (176)
134 COG2179 Predicted hydrolase of 93.6 0.57 1.2E-05 46.6 10.1 110 451-606 20-133 (175)
135 TIGR02252 DREG-2 REG-2-like, H 93.1 0.2 4.4E-06 52.1 6.7 94 492-605 105-199 (203)
136 TIGR01549 HAD-SF-IA-v1 haloaci 92.8 0.14 3E-06 50.7 4.7 91 492-604 64-154 (154)
137 PF06888 Put_Phosphatase: Puta 92.8 0.37 8E-06 51.5 8.1 103 492-601 71-187 (234)
138 smart00577 CPDc catalytic doma 92.7 0.17 3.7E-06 50.1 5.1 94 491-609 44-140 (148)
139 TIGR01533 lipo_e_P4 5'-nucleot 92.7 0.46 9.9E-06 51.8 8.8 86 490-600 116-204 (266)
140 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.4 1.1 2.4E-05 48.2 11.3 94 485-604 17-115 (242)
141 TIGR01261 hisB_Nterm histidino 91.9 0.26 5.6E-06 49.6 5.4 99 492-608 29-144 (161)
142 PLN02811 hydrolase 91.8 0.33 7.2E-06 51.4 6.3 97 492-607 78-180 (220)
143 TIGR01675 plant-AP plant acid 91.5 0.81 1.7E-05 48.7 8.7 87 491-597 119-209 (229)
144 PRK05446 imidazole glycerol-ph 91.1 0.4 8.6E-06 54.5 6.4 99 491-607 29-144 (354)
145 TIGR01681 HAD-SF-IIIC HAD-supe 90.6 0.65 1.4E-05 44.8 6.5 39 492-530 29-68 (128)
146 TIGR00685 T6PP trehalose-phosp 90.6 0.36 7.9E-06 52.0 5.3 64 569-636 164-239 (244)
147 KOG3040 Predicted sugar phosph 90.1 1.4 3E-05 45.3 8.5 50 482-531 13-65 (262)
148 TIGR01664 DNA-3'-Pase DNA 3'-p 89.7 0.81 1.8E-05 46.3 6.7 40 493-532 43-94 (166)
149 PLN02919 haloacid dehalogenase 89.5 1.4 3.1E-05 57.5 10.2 115 492-626 161-281 (1057)
150 TIGR01691 enolase-ppase 2,3-di 89.3 0.7 1.5E-05 49.0 6.1 98 490-608 93-193 (220)
151 PRK10563 6-phosphogluconate ph 89.0 0.38 8.2E-06 50.8 3.8 96 492-608 88-183 (221)
152 TIGR02247 HAD-1A3-hyp Epoxide 88.1 0.49 1.1E-05 49.6 3.9 97 491-606 93-191 (211)
153 PLN02205 alpha,alpha-trehalose 87.9 2.6 5.5E-05 53.7 10.7 67 449-528 586-653 (854)
154 COG3769 Predicted hydrolase (H 87.6 2.8 6.1E-05 43.6 8.7 37 496-532 27-63 (274)
155 PLN03017 trehalose-phosphatase 87.0 9.3 0.0002 43.5 13.4 44 482-526 121-166 (366)
156 PF09419 PGP_phosphatase: Mito 86.8 2.2 4.7E-05 43.2 7.4 102 454-599 36-152 (168)
157 PRK09456 ?-D-glucose-1-phospha 85.6 1.8 3.9E-05 44.9 6.5 95 492-607 84-181 (199)
158 KOG3120 Predicted haloacid deh 84.5 4.2 9.2E-05 42.4 8.2 113 492-610 84-209 (256)
159 TIGR01686 FkbH FkbH-like domai 84.1 2.4 5.2E-05 47.7 7.1 93 492-610 31-129 (320)
160 PLN02645 phosphoglycolate phos 82.7 2.5 5.5E-05 47.3 6.5 48 485-532 37-87 (311)
161 PF03767 Acid_phosphat_B: HAD 81.8 2.7 5.9E-05 44.9 6.0 89 492-599 115-207 (229)
162 PRK10725 fructose-1-P/6-phosph 81.1 2.7 5.8E-05 42.9 5.6 93 493-606 89-181 (188)
163 PHA02597 30.2 hypothetical pro 79.8 3.8 8.2E-05 42.3 6.2 99 492-613 74-177 (197)
164 TIGR01993 Pyr-5-nucltdase pyri 79.2 2.4 5.2E-05 43.3 4.4 95 492-606 84-180 (184)
165 PF13344 Hydrolase_6: Haloacid 76.8 1.6 3.6E-05 40.2 2.1 48 485-532 7-57 (101)
166 TIGR01680 Veg_Stor_Prot vegeta 72.1 20 0.00044 39.1 9.2 88 490-597 143-235 (275)
167 TIGR01517 ATPase-IIB_Ca plasma 68.4 80 0.0017 41.1 15.3 21 141-161 186-206 (941)
168 PRK10444 UMP phosphatase; Prov 64.5 6.8 0.00015 42.4 3.8 45 485-529 10-54 (248)
169 COG0474 MgtA Cation transport 63.8 1.1E+02 0.0024 39.8 15.1 270 18-305 42-330 (917)
170 TIGR01684 viral_ppase viral ph 62.8 13 0.00027 41.1 5.4 41 493-533 146-187 (301)
171 COG1011 Predicted hydrolase (H 62.7 22 0.00047 37.3 7.3 120 492-636 99-226 (229)
172 TIGR01458 HAD-SF-IIA-hyp3 HAD- 62.7 9.1 0.0002 41.6 4.4 48 485-532 10-64 (257)
173 PLN02151 trehalose-phosphatase 62.6 72 0.0016 36.4 11.6 61 572-636 269-341 (354)
174 PRK10748 flavin mononucleotide 62.2 12 0.00027 39.9 5.4 90 492-608 113-205 (238)
175 COG0637 Predicted phosphatase/ 62.2 15 0.00032 38.9 5.9 98 491-607 85-182 (221)
176 PLN02177 glycerol-3-phosphate 62.1 25 0.00053 42.1 8.2 104 493-611 111-215 (497)
177 PHA03398 viral phosphatase sup 60.4 14 0.0003 40.8 5.3 40 493-532 148-188 (303)
178 TIGR01457 HAD-SF-IIA-hyp2 HAD- 60.4 15 0.00032 39.7 5.5 48 485-532 10-60 (249)
179 TIGR01493 HAD-SF-IA-v2 Haloaci 58.6 11 0.00025 37.7 4.1 84 492-603 90-175 (175)
180 TIGR01458 HAD-SF-IIA-hyp3 HAD- 58.2 17 0.00038 39.4 5.7 119 494-635 122-253 (257)
181 TIGR01647 ATPase-IIIA_H plasma 58.0 1.3E+02 0.0028 38.2 14.1 190 108-307 63-262 (755)
182 PTZ00445 p36-lilke protein; Pr 57.9 21 0.00045 37.5 5.7 63 444-519 28-102 (219)
183 COG3700 AphA Acid phosphatase 56.9 17 0.00036 36.7 4.6 91 492-609 114-210 (237)
184 TIGR02251 HIF-SF_euk Dullard-l 55.9 8.5 0.00018 38.7 2.5 42 490-532 40-81 (162)
185 COG0241 HisB Histidinol phosph 55.4 20 0.00043 36.8 5.1 98 493-609 32-146 (181)
186 TIGR02244 HAD-IG-Ncltidse HAD 51.6 55 0.0012 37.2 8.3 102 494-601 186-312 (343)
187 TIGR01663 PNK-3'Pase polynucle 51.4 34 0.00073 41.2 6.9 40 493-532 198-249 (526)
188 PLN02423 phosphomannomutase 51.0 19 0.00042 38.8 4.5 43 571-614 188-235 (245)
189 TIGR01657 P-ATPase-V P-type AT 48.6 7.1E+02 0.015 33.1 19.0 213 104-345 197-450 (1054)
190 PF08235 LNS2: LNS2 (Lipin/Ned 48.1 81 0.0018 31.6 7.9 103 491-606 26-141 (157)
191 PF13380 CoA_binding_2: CoA bi 46.2 20 0.00043 33.9 3.2 77 449-531 18-103 (116)
192 TIGR01689 EcbF-BcbF capsule bi 46.1 22 0.00048 34.2 3.6 31 491-521 23-53 (126)
193 PRK14194 bifunctional 5,10-met 43.3 95 0.0021 34.6 8.4 141 489-629 12-212 (301)
194 PF12368 DUF3650: Protein of u 43.0 19 0.00042 24.9 1.8 15 34-48 13-27 (28)
195 PRK15122 magnesium-transportin 42.7 8.9E+02 0.019 31.5 18.5 81 102-183 119-215 (903)
196 PTZ00174 phosphomannomutase; P 42.6 33 0.00072 36.9 4.7 33 492-524 22-54 (247)
197 PF00389 2-Hacid_dh: D-isomer 39.6 1.5E+02 0.0032 28.4 8.3 69 574-649 52-122 (133)
198 TIGR00262 trpA tryptophan synt 38.7 1.1E+02 0.0023 33.3 7.9 41 489-529 121-163 (256)
199 PF05822 UMPH-1: Pyrimidine 5' 38.7 1.1E+02 0.0023 33.1 7.6 134 491-636 89-241 (246)
200 TIGR01116 ATPase-IIA1_Ca sarco 38.3 7.8E+02 0.017 32.1 16.9 141 702-845 761-915 (917)
201 PRK11507 ribosome-associated p 37.9 36 0.00078 29.2 3.1 27 136-162 37-63 (70)
202 KOG0210 P-type ATPase [Inorgan 37.9 1.5E+02 0.0032 36.5 9.1 30 493-522 712-741 (1051)
203 PF06506 PrpR_N: Propionate ca 37.5 1.5E+02 0.0032 30.1 8.3 106 496-648 65-172 (176)
204 COG0647 NagD Predicted sugar p 37.4 37 0.00081 37.1 4.0 47 483-529 15-61 (269)
205 TIGR01452 PGP_euk phosphoglyco 37.2 34 0.00074 37.6 3.8 48 485-532 11-61 (279)
206 TIGR01524 ATPase-IIIB_Mg magne 37.1 9.7E+02 0.021 31.0 17.3 39 141-180 151-189 (867)
207 PRK14188 bifunctional 5,10-met 36.7 1.3E+02 0.0028 33.5 8.2 63 564-626 136-208 (296)
208 PRK10517 magnesium-transportin 36.4 8.7E+02 0.019 31.6 16.7 85 104-193 126-212 (902)
209 PLN02591 tryptophan synthase 35.9 1.7E+02 0.0036 31.8 8.7 83 493-597 116-201 (250)
210 PRK14179 bifunctional 5,10-met 35.7 1.7E+02 0.0037 32.4 8.8 63 564-626 136-208 (284)
211 CHL00200 trpA tryptophan synth 35.4 1.4E+02 0.0031 32.6 8.2 88 490-599 126-216 (263)
212 PRK09479 glpX fructose 1,6-bis 35.0 1.1E+02 0.0024 34.0 7.0 106 487-601 161-282 (319)
213 KOG4686 Predicted sugar transp 34.1 1.4E+02 0.0031 33.0 7.6 51 719-775 269-319 (459)
214 PF06570 DUF1129: Protein of u 33.1 4.6E+02 0.01 27.3 11.3 9 789-797 142-150 (206)
215 PF13275 S4_2: S4 domain; PDB: 32.4 26 0.00057 29.5 1.5 24 137-160 34-57 (65)
216 TIGR01494 ATPase_P-type ATPase 32.3 1.5E+02 0.0033 35.5 8.6 148 140-305 53-212 (499)
217 COG5547 Small integral membran 31.6 2.1E+02 0.0045 23.5 6.1 48 65-120 3-52 (62)
218 TIGR01456 CECR5 HAD-superfamil 31.4 1.7E+02 0.0037 32.9 8.3 49 484-532 8-64 (321)
219 PF01455 HupF_HypC: HupF/HypC 31.1 1.1E+02 0.0023 26.1 5.0 34 133-166 16-52 (68)
220 PF00122 E1-E2_ATPase: E1-E2 A 31.0 3.6E+02 0.0078 28.2 10.4 60 107-175 3-62 (230)
221 PRK15424 propionate catabolism 30.6 4.6E+02 0.01 31.9 12.1 70 496-595 95-165 (538)
222 PF05297 Herpes_LMP1: Herpesvi 29.4 18 0.00039 39.0 0.0 18 718-735 25-42 (381)
223 cd04728 ThiG Thiazole synthase 29.3 3.9E+02 0.0084 28.9 9.8 52 477-528 89-143 (248)
224 TIGR01106 ATPase-IIC_X-K sodiu 29.2 8.8E+02 0.019 31.9 15.3 36 154-189 148-184 (997)
225 PF12710 HAD: haloacid dehalog 28.8 24 0.00052 35.8 0.8 14 330-343 1-14 (192)
226 TIGR01522 ATPase-IIA2_Ca golgi 28.8 6.5E+02 0.014 32.7 13.9 36 141-177 137-172 (884)
227 PF06738 DUF1212: Protein of u 28.6 2.8E+02 0.0061 28.4 8.8 71 24-113 71-141 (193)
228 PRK14184 bifunctional 5,10-met 28.6 2.5E+02 0.0054 31.1 8.6 137 490-626 10-211 (286)
229 cd01516 FBPase_glpX Bacterial 28.3 1.7E+02 0.0038 32.3 7.2 107 487-601 158-279 (309)
230 PF03120 DNA_ligase_OB: NAD-de 27.8 32 0.0007 30.5 1.3 22 147-168 45-67 (82)
231 PRK00652 lpxK tetraacyldisacch 27.7 1E+02 0.0022 34.8 5.6 58 574-631 69-154 (325)
232 PRK00208 thiG thiazole synthas 27.6 4.4E+02 0.0095 28.5 9.9 52 477-528 89-143 (250)
233 PF12689 Acid_PPase: Acid Phos 27.5 1E+02 0.0022 31.4 5.0 41 492-532 45-86 (169)
234 PRK13111 trpA tryptophan synth 27.2 6.2E+02 0.013 27.5 11.4 85 491-597 125-212 (258)
235 COG1188 Ribosome-associated he 27.1 62 0.0014 29.7 3.0 32 134-166 32-63 (100)
236 COG0279 GmhA Phosphoheptose is 27.1 1.5E+02 0.0033 29.9 5.9 58 439-520 91-148 (176)
237 KOG0205 Plasma membrane H+-tra 26.3 8.2 0.00018 46.2 -3.4 173 482-659 432-650 (942)
238 PLN03190 aminophospholipid tra 26.3 5.7E+02 0.012 34.3 12.8 65 97-161 140-211 (1178)
239 PF15584 Imm44: Immunity prote 25.5 33 0.00072 30.8 0.9 20 154-173 13-32 (94)
240 PRK04980 hypothetical protein; 25.3 1.1E+02 0.0023 28.5 4.2 58 133-195 18-82 (102)
241 COG2179 Predicted hydrolase of 24.8 1.4E+02 0.003 30.2 5.2 81 446-532 50-133 (175)
242 PRK12415 fructose 1,6-bisphosp 24.7 2.1E+02 0.0046 31.9 7.1 107 487-601 159-280 (322)
243 TIGR01459 HAD-SF-IIA-hyp4 HAD- 24.4 58 0.0013 34.8 2.8 91 494-606 140-236 (242)
244 TIGR02250 FCP1_euk FCP1-like p 24.2 1.2E+02 0.0026 30.3 4.8 41 491-532 57-97 (156)
245 PRK14175 bifunctional 5,10-met 24.2 1.6E+02 0.0035 32.5 6.2 45 489-533 11-64 (286)
246 TIGR03849 arch_ComA phosphosul 24.1 1.4E+02 0.0031 32.0 5.5 68 494-588 40-117 (237)
247 PF14336 DUF4392: Domain of un 23.6 1.7E+02 0.0036 32.5 6.3 38 495-532 63-101 (291)
248 PRK05585 yajC preprotein trans 23.5 6.1E+02 0.013 23.7 8.9 27 114-140 35-61 (106)
249 cd02067 B12-binding B12 bindin 23.5 89 0.0019 29.2 3.6 80 452-532 21-104 (119)
250 TIGR02329 propionate_PrpR prop 23.3 7.5E+02 0.016 30.0 12.2 101 496-644 85-187 (526)
251 PRK14170 bifunctional 5,10-met 23.3 1.8E+02 0.0038 32.2 6.2 45 489-533 10-63 (284)
252 COG0078 ArgF Ornithine carbamo 23.2 5E+02 0.011 29.0 9.5 33 496-532 91-123 (310)
253 PRK14178 bifunctional 5,10-met 22.5 3.2E+02 0.007 30.1 8.0 64 563-626 129-202 (279)
254 PRK14169 bifunctional 5,10-met 22.4 2E+02 0.0043 31.8 6.4 137 490-626 10-206 (282)
255 PF03453 MoeA_N: MoeA N-termin 22.2 1E+02 0.0022 30.9 3.9 57 149-211 81-142 (162)
256 cd05017 SIS_PGI_PMI_1 The memb 22.1 1.4E+02 0.003 28.0 4.6 37 493-531 55-91 (119)
257 PRK01122 potassium-transportin 21.8 7.8E+02 0.017 30.9 12.1 80 100-188 65-147 (679)
258 COG3462 Predicted membrane pro 21.8 4.3E+02 0.0093 24.7 7.2 12 819-830 41-52 (117)
259 PRK00856 pyrB aspartate carbam 21.8 4.3E+02 0.0093 29.6 9.0 39 494-532 87-125 (305)
260 PF13807 GNVR: G-rich domain o 21.7 1.7E+02 0.0036 25.7 4.7 33 697-729 45-77 (82)
261 PF05975 EcsB: Bacterial ABC t 21.4 1.3E+03 0.028 26.6 18.1 25 643-667 13-37 (386)
262 PRK11033 zntA zinc/cadmium/mer 21.3 4.9E+02 0.011 33.0 10.5 73 107-189 213-286 (741)
263 PRK14167 bifunctional 5,10-met 21.1 2.1E+02 0.0046 31.9 6.3 137 489-625 10-210 (297)
264 PRK10671 copA copper exporting 20.7 6.6E+02 0.014 32.3 11.7 76 104-189 290-366 (834)
265 PRK14191 bifunctional 5,10-met 20.4 2.1E+02 0.0045 31.7 6.1 45 489-533 9-63 (285)
266 COG3071 HemY Uncharacterized e 20.3 2.3E+02 0.0049 32.6 6.4 15 856-870 73-87 (400)
267 cd00860 ThrRS_anticodon ThrRS 20.1 2E+02 0.0043 25.0 5.0 47 486-532 6-53 (91)
No 1
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-202 Score=1654.77 Aligned_cols=942 Identities=84% Similarity=1.276 Sum_probs=923.9
Q ss_pred CCcccccHHHhhccccccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHH
Q 002176 1 MDSKAETMEAVLKEAVDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAA 80 (956)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~a 80 (956)
|.++-.+++..++|.+|.+..|.+||+++|.|+++|||++|+++|+++||+|+++++|++.+++|+.+||||++|+|++|
T Consensus 1 m~e~l~s~~di~~E~vdl~~~p~eeVfeeL~~t~~GLt~~E~~eRlk~fG~NkleEkken~~lKFl~Fm~~PlswVMEaA 80 (942)
T KOG0205|consen 1 MIEELDSLEDIKKEQVDLEAIPIEEVFEELLCTREGLTSDEVEERLKIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAA 80 (942)
T ss_pred CcccccchhhhhhhccccccCchhhhHHHHhcCCCCCchHHHHHHHHhhCchhhhhhhhhHHHHHHHHHhchHHHHHHHH
Confidence 44444458999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEE
Q 002176 81 AIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISV 160 (956)
Q Consensus 81 ails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l 160 (956)
|++++.+.+++|+|+||.||++|++++++|+.++|+||++|+++.++||+.++++++|+|||+|.++++++||||||+.+
T Consensus 81 AimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsi 160 (942)
T KOG0205|consen 81 AIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSI 160 (942)
T ss_pred HHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccchH
Q 002176 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHF 240 (956)
Q Consensus 161 ~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l 240 (956)
+.||+||||+||++|+.|+||+|+|||||.||.|++||.+||||+|++|++.++|++||.+|++||.+++++++.+.+||
T Consensus 161 k~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVdst~~~GHF 240 (942)
T KOG0205|consen 161 KLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHF 240 (942)
T ss_pred ccCCEecCccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcCCCCcccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccch
Q 002176 241 QKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTA 320 (956)
Q Consensus 241 ~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~ 320 (956)
|++++.|+++|++++++++++.+.++|+.+.+.++..+.++++++++.+|.+||+++++++++|++||+++|+++|++++
T Consensus 241 qkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtA 320 (942)
T KOG0205|consen 241 QKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTA 320 (942)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeE
Q 002176 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVH 400 (956)
Q Consensus 321 lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~ 400 (956)
+|+|+.+|++|+|||||||.|+++|++..++.+.++.++|++++.|+.+++.+++|++|.|++++++||++.+.+|++++
T Consensus 321 IEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dPKeara~ikevh 400 (942)
T KOG0205|consen 321 IEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADPKEARAGIKEVH 400 (942)
T ss_pred HHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCHHHHhhCceEEe
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCC
Q 002176 401 FLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGP 480 (956)
Q Consensus 401 ~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~ 480 (956)
+.||||.+||.+.+|.+++|++++++|||||.|+++|+.+.++++++++.+++|+++|+|.|++|++..+++.++..+.+
T Consensus 401 F~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~p 480 (942)
T KOG0205|consen 401 FLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGP 480 (942)
T ss_pred eccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhh
Q 002176 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIE 560 (956)
Q Consensus 481 l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 560 (956)
|+|+|+..+.||||+|+.++|++....|++|+|+|||...++++++|++|+.+|+|++..+.|.+.++.+...+.+++++
T Consensus 481 w~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie 560 (942)
T KOG0205|consen 481 WEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIE 560 (942)
T ss_pred cccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHH
Q 002176 561 KADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (956)
Q Consensus 561 ~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR 640 (956)
+++.||.+.||||+++|+.||++||+|+|+|||+||+||||+||+|||+.++||+|+.+|||||+++++|.|+.++..+|
T Consensus 561 ~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSr 640 (942)
T KOG0205|consen 561 KADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSR 640 (942)
T ss_pred hccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhcccccccccCCCCCCCCCCccchHHHHHHHHHH
Q 002176 641 AIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVIL 720 (956)
Q Consensus 641 ~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~~~~l~~d~~~p~~~p~~~~~~~~~~~~~~~ 720 (956)
.+|+||++|.+|+++.++.+++++++..++|.|.|+|+++++++++||++.|++++|+++|+|.|++|+++++|..++++
T Consensus 641 aIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis~d~v~psp~pdswkl~~ifatgvVl 720 (942)
T KOG0205|consen 641 AIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFATGVVL 720 (942)
T ss_pred HHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEEcccCCCCCCCcccchhhhheeeeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHH
Q 002176 721 GGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFA 800 (956)
Q Consensus 721 G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~ 800 (956)
|.|++++++.+||..+.+.||+..||++...++.. +..+.+|+++++.+|+++|++|+++|+|.++|+++++.+++
T Consensus 721 gtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~----~~~~a~ylqvsi~sqaliFvtrsr~w~~~erpg~~L~~af~ 796 (942)
T KOG0205|consen 721 GTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEH----ELMSALYLQVSIISQALIFVTRSRSWSFVERPGWLLLIAFF 796 (942)
T ss_pred hhHHHHHHHHHhhhhccccccccccceeeccCCHH----HHHHhhhhhheehhceeeEEEeccCCccccCcHHHHHHHHH
Confidence 99999999999999999999999999998888877 78889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHHHhhhhhhcccccCChhHHH
Q 002176 801 VAQLIATLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLVIEQRIAFTRKKDFGKEERE 880 (956)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (956)
.++++++++++|++|.|....+++|.|..++|+++++.++|.++.||..||.++|++|.+.+++|++++.|+++++++++
T Consensus 797 ~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~~~~~~k~~~~~kk~~~~~~~~ 876 (942)
T KOG0205|consen 797 AAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWDRLIENKTAFTTKKDYGKEERE 876 (942)
T ss_pred HHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHHHHhcCcchhhhccccchhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhcccCCCCccccccccchhhhhHHhHHHHhhhhHHhhhhhhcccchhhhhhhhcCCChhhhcccccC
Q 002176 881 LKWAHAQRTLHGLHAPDTKMFSEHNKFTELNQMAEEAKRRAEIARLRELNTLKGHVESVVRLKGLDIDTIQQSYTV 956 (956)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (956)
++||.+||++||+++++ .+|+++++||+|||+|++||||+||+|||+||++|+||+|+|++ |||||
T Consensus 877 a~~~~~qrt~~~lq~~~---------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~klk~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 877 AQWALAQRTLHGLQPPE---------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETI-QHYTV 942 (942)
T ss_pred hHHHHhhhhhcccCCCc---------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhhcccchhhh-hhccC
Confidence 99999999999999994 27999999999999999999999999999999999999999999 99997
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-143 Score=1227.88 Aligned_cols=829 Identities=28% Similarity=0.410 Sum_probs=670.3
Q ss_pred cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCC
Q 002176 16 VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGK 93 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~ 93 (956)
.+.|..+.+|+++.|.++ ++|||++|+.+|+++||+|+++... ++.|.++++||.||+..+|+++|++|+++.
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~----- 76 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA----- 76 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-----
Confidence 356789999999999999 5699999999999999999998554 888999999999999999999999999995
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEe
Q 002176 94 PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLL 173 (956)
Q Consensus 94 ~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll 173 (956)
.|.+.+.|.+++++|++++++||||+++++++|+++.|+.|+|+|+|+.+.+++++|||||||.++-||+||||.||+
T Consensus 77 --~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~ 154 (972)
T KOG0202|consen 77 --DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLI 154 (972)
T ss_pred --hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEE
Confidence 788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCceeeccccCCcCeeeecCC--------------CCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccc
Q 002176 174 EGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQG 238 (956)
Q Consensus 174 ~g~~l~VDeS~LTGES~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~ 238 (956)
+..++.||||.|||||.||.|.. .|++|+||.|..|+++|+|+.||.+|++|++.+.++++ +.++
T Consensus 155 e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kT 234 (972)
T KOG0202|consen 155 EAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKT 234 (972)
T ss_pred eeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhccCCCCC
Confidence 99999999999999999999953 25799999999999999999999999999999999887 5699
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHHHHH-hHhhc---c-c---cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHH
Q 002176 239 HFQKVLTAIGNFCICSIA-VGMIVEII-VMYPI---Q-H---RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (956)
Q Consensus 239 ~l~~~~~~i~~~~~~~i~-i~~~~~~~-~~~~~---~-~---~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~ 309 (956)
|+|+.++.++..+.-.+. +++.+..+ +.|+. . + ..+...+..++++.+++||++||+++++++++|.+||+
T Consensus 235 PLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMa 314 (972)
T KOG0202|consen 235 PLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMA 314 (972)
T ss_pred cHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHH
Confidence 999999999887542222 22222112 11111 1 2 33445566778999999999999999999999999999
Q ss_pred hCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeec-----------cCCC------------------CHH
Q 002176 310 LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF-----------AKGV------------------DAD 360 (956)
Q Consensus 310 ~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-----------~~~~------------------~~~ 360 (956)
|++++||+++++|+||.+++||+|||||||+|+|++.+.++... ..++ +.+
T Consensus 315 kknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~ 394 (972)
T KOG0202|consen 315 KKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDND 394 (972)
T ss_pred hhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCCCceEecCccccccccccH
Confidence 99999999999999999999999999999999999998764211 0011 111
Q ss_pred ---HHHHHHHHhccc------c-----ccChHHHHHHHhcC-----ChH---H-----------HhhccceeEeecCCCC
Q 002176 361 ---AVVLMAARASRV------E-----NQDAIDAAIVGMLA-----DPK---E-----------ARANIQEVHFLPFNPT 407 (956)
Q Consensus 361 ---~~l~~aa~~~~~------~-----~~~~i~~ai~~~~~-----~~~---~-----------~~~~~~~l~~~pF~s~ 407 (956)
+++..++.|+.. . .+.|.|.|+...+. +.. . ....++...++||+++
T Consensus 395 ~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssd 474 (972)
T KOG0202|consen 395 LLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSD 474 (972)
T ss_pred HHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccccccccchhHHHHhhhheeEeecccc
Confidence 234444554421 1 34677888765431 111 0 1122345589999999
Q ss_pred CcceEEEEEcCCCc--EEEEEeCcHHHHHHhhcC------------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCC-C
Q 002176 408 DKRTALTYIDSEGK--MHRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPD-G 472 (956)
Q Consensus 408 ~kr~sv~~~~~~g~--~~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~-~ 472 (956)
+|+|++.+.+..|+ ...|+|||+|.|+++|+. .+..++.+.+...+|+++|+||||+|+++.+. .
T Consensus 475 rK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~ 554 (972)
T KOG0202|consen 475 RKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQV 554 (972)
T ss_pred cceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccC
Confidence 99999999876664 678999999999999953 23567889999999999999999999997763 1
Q ss_pred ----------CccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCcc
Q 002176 473 ----------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSA 540 (956)
Q Consensus 473 ----------~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~ 540 (956)
.+...|.+|+|+|++++.||||++++++|+.|+++||+|+|||||+.+||.+|||++|+..+.. ...+
T Consensus 555 ~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~ 634 (972)
T KOG0202|consen 555 PDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMA 634 (972)
T ss_pred hhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccc
Confidence 1345789999999999999999999999999999999999999999999999999999975433 4578
Q ss_pred ccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhc
Q 002176 541 LLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSA 619 (956)
Q Consensus 541 l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~a 619 (956)
++|++.|. ++++++++...+..+|||++|.||.+||++||++|++|||||||+||+||||.|||||||| +|||+||+|
T Consensus 635 ~TG~efD~-ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeA 713 (972)
T KOG0202|consen 635 LTGSEFDD-LSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEA 713 (972)
T ss_pred cchhhhhc-CCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhh
Confidence 99999985 8888999999999999999999999999999999999999999999999999999999999 999999999
Q ss_pred cceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhcCCChHHHHHHHHhhccc-ccccccC
Q 002176 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFML-LALIWKFDFPPFMVLIIAILNDGT-IMTISKD 697 (956)
Q Consensus 620 ADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~-~~~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d 697 (956)
||+||.||||++|+.||++||.+|+|||+|+.|.++.|++.+..+++ ..+..++|+.|+|+||+|+++|++ +++++++
T Consensus 714 sDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~e 793 (972)
T KOG0202|consen 714 SDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFE 793 (972)
T ss_pred hhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCC
Confidence 99999999999999999999999999999999999999998776655 456678999999999999999998 5899988
Q ss_pred CC------CCCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--cCC----cccCcc--cCCCCchhhHH-HH
Q 002176 698 RV------KPSPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD--FFP----RTFGVS--SLHEKDIDDWK-KL 761 (956)
Q Consensus 698 ~~------~p~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~--~~~----~~~~~~--~~~~~~~~~~~-~~ 761 (956)
++ +||+.++ ......++..++.+|.|+.+.++..|++.+... -.+ .+|+.. ...+++-..+. ..
T Consensus 794 p~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~ 873 (972)
T KOG0202|consen 794 PVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMC 873 (972)
T ss_pred CCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccc
Confidence 76 3343333 333456788889999999999887665544311 000 000000 00000000000 00
Q ss_pred HHHHHHHHHHHH-HHHHHHHhcCCCccccCh---hHHHHHHHHHHHHHHHHHHHhcc--ccccccCchhHHHHHHHHHHH
Q 002176 762 ASAIYLQVSTIS-QALIFVTRARSWSFVDRP---GLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGVVWLYN 835 (956)
Q Consensus 762 ~~~~~~~~~i~~-~~~i~~~rs~~~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 835 (956)
..++.+++.++. .++.+++|+...+.+..| |.||++++.++++. .++.+|.+ -..++..+.+|.-|++++.++
T Consensus 874 ~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~-~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s 952 (972)
T KOG0202|consen 874 PLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVL-HFLVLYVPPLQRIFQTEPLSLAEWLLVLAIS 952 (972)
T ss_pred cceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHh-hheEEEechhhhhheecCCcHHHHHHHHHHh
Confidence 112223333333 335578888877766543 66888887766544 44556654 123456677776667788899
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 002176 836 LIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 836 ~~~~~~~~~~K~~~r~~~ 853 (956)
..+++++|++|++.|+++
T Consensus 953 ~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 953 SPVIIVDEILKFIARNYF 970 (972)
T ss_pred hhhhhHHHHHHHHHHhcc
Confidence 999999999999999875
No 3
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.3e-134 Score=1235.63 Aligned_cols=751 Identities=61% Similarity=0.943 Sum_probs=660.8
Q ss_pred CCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHH
Q 002176 36 GLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISF 115 (956)
Q Consensus 36 GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~ 115 (956)
|||++||++|+++||+|++++++++.|..|+++|++|++|+|++++++++++ ++|.++++|++++++++.+++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------~~~~~~~~i~~~~~i~~~i~~ 73 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------ENWVDFVIILGLLLLNATIGF 73 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------cchhhhhhhhhhhHHHHHHHH
Confidence 9999999999999999999988788899999999999999999999999998 389999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecC
Q 002176 116 IEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKG 195 (956)
Q Consensus 116 ~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~ 195 (956)
+||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||||+|||||.||.|.
T Consensus 74 ~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~ 153 (755)
T TIGR01647 74 IEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKK 153 (755)
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEec
Confidence 99999999999999999999999999999999999999999999999999999999999997899999999999999999
Q ss_pred CCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCc
Q 002176 196 PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKY 274 (956)
Q Consensus 196 ~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~ 274 (956)
+||.+|+||.|.+|+++++|++||.+|++||+++++++. .+++|+|+.+++++.+++..+++.+++.+++.+...+.++
T Consensus 154 ~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~ 233 (755)
T TIGR01647 154 TGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESF 233 (755)
T ss_pred cCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 999999999999999999999999999999999999887 4678999999999988655443333333333332245677
Q ss_pred cchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeecc
Q 002176 275 RPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA 354 (956)
Q Consensus 275 ~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~ 354 (956)
...+..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+ ...
T Consensus 234 ~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~--~~~ 311 (755)
T TIGR01647 234 REGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEIL--PFF 311 (755)
T ss_pred HHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEE--ecC
Confidence 888899999999999999999999999999999999999999999999999999999999999999999998865 222
Q ss_pred CCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEcC-CCcEEEEEeCcHHHH
Q 002176 355 KGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQI 433 (956)
Q Consensus 355 ~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~i 433 (956)
.+.++++++.+++.+++..++||+|.|++.++.+....+..++.++++||++.+|+|++.+.+. +|+.+.++||+||.+
T Consensus 312 ~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~i 391 (755)
T TIGR01647 312 NGFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVI 391 (755)
T ss_pred CCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHH
Confidence 2366778888888777666779999999988765544456688899999999999999988765 377888999999999
Q ss_pred HHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEE
Q 002176 434 LNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKM 513 (956)
Q Consensus 434 l~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~m 513 (956)
+++|++..+.++++++.+++++++|+|++++||++ .|++|+|+|+++|+||||||++++|++||++||+|+|
T Consensus 392 l~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~m 463 (755)
T TIGR01647 392 LDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKM 463 (755)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEE
Confidence 99998777777888899999999999999999983 2678999999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHhCCCCCCCCCccc-cCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcC
Q 002176 514 ITGDQLAIAKETGRRLGMGTNMYPSSAL-LGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (956)
Q Consensus 514 iTGD~~~tA~~ia~~lGi~~~~~~~~~l-~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GD 592 (956)
+||||+.||.++|+++||..+.+....+ .|.+. +.+++.++++.++++++|||++||||+++|+.||++||+|+||||
T Consensus 464 iTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGD 542 (755)
T TIGR01647 464 VTGDHLAIAKETARRLGLGTNIYTADVLLKGDNR-DDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGD 542 (755)
T ss_pred ECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcch-hhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcC
Confidence 9999999999999999997543322222 23222 246677899999999999999999999999999999999999999
Q ss_pred CccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 002176 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK 672 (956)
Q Consensus 593 GvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~ 672 (956)
|+||+||||+|||||||++|+|+||++||+||++|||++|+.++++||++|+||+||+.|.++.|+..++.+++..++++
T Consensus 543 GvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~ 622 (755)
T TIGR01647 543 GVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN 622 (755)
T ss_pred CcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887777766678
Q ss_pred cCCChHHHHHHHHhhcccccccccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCC
Q 002176 673 FDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHE 752 (956)
Q Consensus 673 ~~~~p~~~l~i~~~~d~~~~~l~~d~~~p~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 752 (956)
++++|+|++|+|+++|++.+++++|+++|+++|++|....++..++++|+++++.++++||+.+...++...++. ..
T Consensus 623 ~~l~~~~il~~~l~~d~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 699 (755)
T TIGR01647 623 FYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGL---QL 699 (755)
T ss_pred cchhHHHHHHHHHHHhHhHhhccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcccc---cc
Confidence 889999999999999998999999999999999999999999999999999999999888777642221111111 00
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHHHHH
Q 002176 753 KDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAV 811 (956)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 811 (956)
. +.+.++.+|+...+..++.+|++|+++.+|.++|++++++++++.+++.++++.
T Consensus 700 ~----~~~~~t~~f~~~~~~~~~~~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 700 L----HGNLQSLIYLQVSISGQATIFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred c----HhhhHHHHHHHHHHHHHHHHheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 1 114555555555555555789999999999999999999999988888777654
No 4
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=6.2e-133 Score=1237.72 Aligned_cols=808 Identities=27% Similarity=0.427 Sum_probs=670.2
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Q 002176 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~-~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~ 94 (956)
...+..+.+++++.|+++.+|||++||++|+++||+|+++.+++ +.|..|+++|++|++++|++++++++++
T Consensus 47 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------- 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHPEGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------- 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-------
Confidence 45678899999999999999999999999999999999998775 5778899999999999999999999987
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC------CeEEEEeccCcCCCcEEEEeCCCeeec
Q 002176 95 PDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGDIIPA 168 (956)
Q Consensus 95 ~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd------G~~~~I~~~~LvpGDiV~l~~Gd~VPa 168 (956)
++|.++++|++++++|..++++||+|+++++++|+++.+++++|+|| |++++|+++||||||+|.|++||+|||
T Consensus 120 ~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPa 199 (902)
T PRK10517 120 EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPA 199 (902)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEee
Confidence 48999999999999999999999999999999999999999999999 789999999999999999999999999
Q ss_pred ceEEeecCCceeeccccCCcCeeeecCCCC-------------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002176 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 169 D~~ll~g~~l~VDeS~LTGES~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
||+|++|+++.||||+|||||.||.|.+++ ++|+||.|.+|+++++|++||.+|++||+++++++.
T Consensus 200 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~ 279 (902)
T PRK10517 200 DLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQD 279 (902)
T ss_pred eEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccC
Confidence 999999998899999999999999998874 799999999999999999999999999999999876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002176 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++|+|+.+++++++++...++.+.+.++ .+.....+|.+.+..++++++++|||+||++++++++.|+++|+|+|++
T Consensus 280 ~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~il 358 (902)
T PRK10517 280 SEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVI 358 (902)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcE
Confidence 678999999999987754433322222222 2222345677888889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcccc--ccChHHHHHHHhcCCh--H
Q 002176 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE--NQDAIDAAIVGMLADP--K 390 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~--~~~~i~~ai~~~~~~~--~ 390 (956)
+|+++++|+||++|+||||||||||+|+|+|.+.. . ..+.+.++++..++.++... ..||+|.|++.++... .
T Consensus 359 Vk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~-~--~~~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~ 435 (902)
T PRK10517 359 VKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT-D--ISGKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESAR 435 (902)
T ss_pred EecchhhhhccCCCEEEecCCCccccceEEEEEEe-c--CCCCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999998742 1 12445567777777655432 4689999998876432 2
Q ss_pred HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC----------chHHHHHHHHHHHHHHHcCCe
Q 002176 391 EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLR 460 (956)
Q Consensus 391 ~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~~~~i~~~a~~G~R 460 (956)
.....++.++++||||++|+|++++.+.++....++||+||.++++|+. +++.++++.+..++++++|+|
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~r 515 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLR 515 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCE
Confidence 2345678899999999999999988766777788999999999999964 124456778888999999999
Q ss_pred EEEEEEeecCCCCc---cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC
Q 002176 461 SLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP 537 (956)
Q Consensus 461 vlavA~~~l~~~~~---~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~ 537 (956)
|+++||++++..+. ...|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||..
T Consensus 516 vlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~---- 591 (902)
T PRK10517 516 VVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA---- 591 (902)
T ss_pred EEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----
Confidence 99999998764322 12477999999999999999999999999999999999999999999999999999952
Q ss_pred CccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh
Q 002176 538 SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (956)
Q Consensus 538 ~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (956)
..+++|.+.+. ++++++++.+++++||||++|+||.++|+.||++|++|+|||||+||+||||+||||||||+|||+||
T Consensus 592 ~~v~~G~el~~-l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAk 670 (902)
T PRK10517 592 GEVLIGSDIET-LSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAR 670 (902)
T ss_pred cCceeHHHHHh-CCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHH
Confidence 35788888774 78889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChHHHHHHHHhhccccccccc
Q 002176 618 SASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMTISK 696 (956)
Q Consensus 618 ~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~-~~~~p~~~l~i~~~~d~~~~~l~~ 696 (956)
++||+||+||||++|+.+|++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|.+.+++++
T Consensus 671 eaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~ 750 (902)
T PRK10517 671 EAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPF 750 (902)
T ss_pred HhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcC
Confidence 9999999999999999999999999999999999999999999888877666666 699999999999999987899999
Q ss_pred CCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHH
Q 002176 697 DRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQ 774 (956)
Q Consensus 697 d~~~p~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 774 (956)
|++.|.. +|.+|+...+....++.|++.++++++.|++++.. ++.. ..... ..+.+. +|...+++|
T Consensus 751 d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~------~~~~---~~~~~--~~~~~~-~F~~~~~~q 818 (902)
T PRK10517 751 DNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWV------FHAN---TPETQ--TLFQSG-WFVVGLLSQ 818 (902)
T ss_pred CCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccc---chhhH--hHHHHH-HHHHHHHHH
Confidence 9987763 67778888888888899999888887777665421 1110 00000 012223 355666666
Q ss_pred H-HHHHHhcCCCccccC-hhHHHHHHHHHHHHHHHHHHHhccccccccCchh--HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 775 A-LIFVTRARSWSFVDR-PGLLLVLAFAVAQLIATLIAVYANWSFAAIEGVG--WGWAGVVWLYNLIFYIPLDFIKFFIR 850 (956)
Q Consensus 775 ~-~i~~~rs~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~r 850 (956)
. .+|++|+++.+++.+ |.+..++..++.+++.+++++..--+++.+.+++ +..|+++++++.. +..++.|....
T Consensus 819 ~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~ 896 (902)
T PRK10517 819 TLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFYS 896 (902)
T ss_pred HHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 5 679999987555444 4444444444444444444411111234455555 3344444444433 55778776644
Q ss_pred Hhc
Q 002176 851 YAL 853 (956)
Q Consensus 851 ~~~ 853 (956)
+.+
T Consensus 897 ~~~ 899 (902)
T PRK10517 897 RRY 899 (902)
T ss_pred Hhh
Confidence 444
No 5
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.6e-132 Score=1234.17 Aligned_cols=815 Identities=26% Similarity=0.416 Sum_probs=670.5
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC----
Q 002176 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANG---- 90 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~---- 90 (956)
...|+.+.+|+++.|+++.+|||++||++|+++||+|++++++ .+.|+.|+++|++|+.|+|+++++++++++..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 25 AREAANSLEETLANLNTHRQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 4578899999999999999999999999999999999999776 56788999999999999999999999998532
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC------CeEEEEeccCcCCCcEEEEeCCC
Q 002176 91 GGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD------GKWMEEDAAILVPGDIISVKLGD 164 (956)
Q Consensus 91 ~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd------G~~~~I~~~~LvpGDiV~l~~Gd 164 (956)
.+...+|.++++|++++++|+.++++||++++++.++|+++.+++++|+|| |++++|+++||||||+|.|++||
T Consensus 105 ~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd 184 (903)
T PRK15122 105 RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGD 184 (903)
T ss_pred CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCC
Confidence 123358999999999999999999999999999999999999999999999 48999999999999999999999
Q ss_pred eeecceEEeecCCceeeccccCCcCeeeecCC-----------------------CCccccCCeeccCcEEEEEEEecch
Q 002176 165 IIPADARLLEGDPLKIDQSALTGESLPVTKGP-----------------------GDSVYSGSTCKQGEIEAVVIATGVH 221 (956)
Q Consensus 165 ~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~-----------------------g~~v~~Gs~v~~G~~~~~V~~tG~~ 221 (956)
+|||||+|++|+++.||||+|||||.||.|.+ +|++|+||.|.+|+++++|++||.+
T Consensus 185 ~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~ 264 (903)
T PRK15122 185 MIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSR 264 (903)
T ss_pred EEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEeccc
Confidence 99999999999988999999999999999975 3689999999999999999999999
Q ss_pred hHHHhHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHH
Q 002176 222 TFFGKAAHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTM 301 (956)
Q Consensus 222 T~~gki~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~ 301 (956)
|++||+++++.+...++++|+.++++++++..+..+++.+.++ .......+|.+.+..++++++++|||+||+++++++
T Consensus 265 T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~-~~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~L 343 (903)
T PRK15122 265 TYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLL-INGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNL 343 (903)
T ss_pred cHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 9999999999876667899999998877643322222221111 112234567778888999999999999999999999
Q ss_pred HHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccc--cccChHH
Q 002176 302 AIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV--ENQDAID 379 (956)
Q Consensus 302 ~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~--~~~~~i~ 379 (956)
+.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.+ . ..+.+.++++.+++.++.. ..+||+|
T Consensus 344 a~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~--~-~~~~~~~~~l~~a~l~s~~~~~~~~p~e 420 (903)
T PRK15122 344 AKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHL--D-VSGRKDERVLQLAWLNSFHQSGMKNLMD 420 (903)
T ss_pred HHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEE--c-CCCCChHHHHHHHHHhCCCCCCCCChHH
Confidence 999999999999999999999999999999999999999999998754 1 1234456677766654332 2468999
Q ss_pred HHHHHhcCCh--HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC----------chHHHHHH
Q 002176 380 AAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN----------KSEIERRV 447 (956)
Q Consensus 380 ~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~----------~~~~~~~~ 447 (956)
.|++.++... ......++.++++||++.+|+|++++.+.+|+.+.++|||||.++++|+. +++.++++
T Consensus 421 ~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i 500 (903)
T PRK15122 421 QAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERL 500 (903)
T ss_pred HHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHH
Confidence 9999876432 12234678899999999999999998876788889999999999999963 22346677
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCC-----ccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHH
Q 002176 448 HAIIDKFAERGLRSLAVAYQEVPDGR-----KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (956)
Q Consensus 448 ~~~i~~~a~~G~RvlavA~~~l~~~~-----~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA 522 (956)
.+.+++++++|+|++++||++++.++ .+..|++++|+|+++|+||||||++++|++|+++||+|+|+||||+.||
T Consensus 501 ~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA 580 (903)
T PRK15122 501 LALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580 (903)
T ss_pred HHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHH
Confidence 88889999999999999999876532 1235789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhcc
Q 002176 523 KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK 602 (956)
Q Consensus 523 ~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~ 602 (956)
.+||+++||.. ..+++|.+++. +++.++.+.+++++||||++|+||+++|+.||++|++|+|||||+||+||||+
T Consensus 581 ~aIA~~lGI~~----~~vi~G~el~~-~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ 655 (903)
T PRK15122 581 AKICREVGLEP----GEPLLGTEIEA-MDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655 (903)
T ss_pred HHHHHHcCCCC----CCccchHhhhh-CCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHh
Confidence 99999999953 35788888874 78889999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChHHHH
Q 002176 603 ADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVL 681 (956)
Q Consensus 603 AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~-~~~~p~~~l 681 (956)
||||||||+|||+||++||+||+||||++|+.++++||++|+||+||+.|.++.|+..++.+++..++.+ +|++|+|++
T Consensus 656 ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil 735 (903)
T PRK15122 656 ADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLL 735 (903)
T ss_pred CCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998877666555555 689999999
Q ss_pred HHHHhhcccccccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHH
Q 002176 682 IIAILNDGTIMTISKDRVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWK 759 (956)
Q Consensus 682 ~i~~~~d~~~~~l~~d~~~p~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 759 (956)
|+|+++|++.+++++|++.+.. +|.+|+.+.+-...+.+|.+.++++++.|++.+.. +. .+ ... ..
T Consensus 736 ~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~--~~-----~~~---~~ 803 (903)
T PRK15122 736 LQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWFV--FA--AN-----SVE---MQ 803 (903)
T ss_pred HHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHH--hc--cC-----cHh---hh
Confidence 9999999888999999886553 56666655444455567877777776666553321 00 01 000 00
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHhcCCCccccChh-HHHHHHHHHHHHHHHHHHH--hccccccccCchhHHHHHHHHHHH
Q 002176 760 KLASAIYLQVSTISQA-LIFVTRARSWSFVDRPG-LLLVLAFAVAQLIATLIAV--YANWSFAAIEGVGWGWAGVVWLYN 835 (956)
Q Consensus 760 ~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 835 (956)
....+.+|...+++|. .+|++|+++.+++.++. +..+++.++.+++.+++++ .. .++.+.++++..|++++.++
T Consensus 804 ~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~f~~~~l~~~~~~~~~~~~ 881 (903)
T PRK15122 804 ALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMAIGIYIPFSPLG--AMVGLEPLPWSYFPWLAATL 881 (903)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhhHHHHH--HHhCCCCCCHHHHHHHHHHH
Confidence 1122334555566665 68999998755555543 3333344444444444443 22 23456677777777777888
Q ss_pred HHHHHHHHHHHHHHHHhc
Q 002176 836 LIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 836 ~~~~~~~~~~K~~~r~~~ 853 (956)
+++++..++.|.+.++.+
T Consensus 882 ~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 882 LGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHHHHHHHHHHHhhhc
Confidence 888888888886544443
No 6
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=2.9e-132 Score=1246.28 Aligned_cols=824 Identities=26% Similarity=0.369 Sum_probs=661.5
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Q 002176 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (956)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~ 91 (956)
|--|||..+.+|++++|+++ .+|||++||++|+++||+|++++++ .+.|..|++||++|+.++|+++++++++++
T Consensus 3 ~~~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~--- 79 (1053)
T TIGR01523 3 EFNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH--- 79 (1053)
T ss_pred CCCchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh---
Confidence 45689999999999999998 4799999999999999999999876 678889999999999999999999999983
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceE
Q 002176 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ 171 (956)
+|.++++|++++++|+.++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+||||||
T Consensus 80 ----~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 80 ----DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ----hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCceeeccccCCcCeeeecCCC---------------CccccCCeeccCcEEEEEEEecchhHHHhHHHhhhccc-
Q 002176 172 LLEGDPLKIDQSALTGESLPVTKGPG---------------DSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN- 235 (956)
Q Consensus 172 ll~g~~l~VDeS~LTGES~pv~K~~g---------------~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~- 235 (956)
|+++++|.||||+|||||.||.|.+. |++|+||.|.+|+++++|++||.+|++|||++++++..
T Consensus 156 Li~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~ 235 (1053)
T TIGR01523 156 LIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGG 235 (1053)
T ss_pred EEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhh
Confidence 99999999999999999999999642 57899999999999999999999999999999886431
Q ss_pred -----------------------------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHH
Q 002176 236 -----------------------------------QQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDN 280 (956)
Q Consensus 236 -----------------------------------~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 280 (956)
.++|+|+.+++++.++.++.++.+++.+++.+ . ..+...+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~ 312 (1053)
T TIGR01523 236 LFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIY 312 (1053)
T ss_pred ccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHH
Confidence 13899999999988754333222222121111 1 112355667
Q ss_pred HHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee---c---c
Q 002176 281 LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI---F---A 354 (956)
Q Consensus 281 ~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~---~---~ 354 (956)
.++++++++|++||+++++++++|++||+++|++||+++++|+||++++||+|||||||+|+|+|.+.++.. + .
T Consensus 313 av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~ 392 (1053)
T TIGR01523 313 AICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDN 392 (1053)
T ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecC
Confidence 789999999999999999999999999999999999999999999999999999999999999999875421 0 0
Q ss_pred --CCC---------------------------------------C---------HHHHHHHHHHhccc------------
Q 002176 355 --KGV---------------------------------------D---------ADAVVLMAARASRV------------ 372 (956)
Q Consensus 355 --~~~---------------------------------------~---------~~~~l~~aa~~~~~------------ 372 (956)
.++ + ...++..++.|+..
T Consensus 393 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~ 472 (1053)
T TIGR01523 393 SDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWK 472 (1053)
T ss_pred CCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCCCCcee
Confidence 000 0 01245556666421
Q ss_pred cccChHHHHHHHhcCCh----------HHH-------------------hhccceeEeecCCCCCcceEEEEEcCCC-cE
Q 002176 373 ENQDAIDAAIVGMLADP----------KEA-------------------RANIQEVHFLPFNPTDKRTALTYIDSEG-KM 422 (956)
Q Consensus 373 ~~~~~i~~ai~~~~~~~----------~~~-------------------~~~~~~l~~~pF~s~~kr~sv~~~~~~g-~~ 422 (956)
..+||.|.|++.++... .+. +..++.++.+||||++|||++++++.+| ++
T Consensus 473 ~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~ 552 (1053)
T TIGR01523 473 AHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETY 552 (1053)
T ss_pred eCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEE
Confidence 12589999998764211 111 1246789999999999999999986545 46
Q ss_pred EEEEeCcHHHHHHhhcC------------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC------------ccCCC
Q 002176 423 HRVSKGAPEQILNLVRN------------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR------------KESSG 478 (956)
Q Consensus 423 ~~~~KGa~e~il~~~~~------------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~------------~~~~e 478 (956)
+.++|||||.|+++|+. +++.++++.+.+++|+++|+|||++|||.++.++ .+..|
T Consensus 553 ~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e 632 (1053)
T TIGR01523 553 NIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAE 632 (1053)
T ss_pred EEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhhccccchhhhc
Confidence 78999999999999963 1245677888999999999999999999886432 23457
Q ss_pred CCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--------CCccccCCcccccc
Q 002176 479 GPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--------PSSALLGQNKDESI 550 (956)
Q Consensus 479 ~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--------~~~~l~g~~~~~~~ 550 (956)
++|+|+|+++++||||+|++++|++|+++||+|+|+||||+.||.++|+++||..+.. ...+++|.+.+. +
T Consensus 633 ~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~-l 711 (1053)
T TIGR01523 633 SDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDA-L 711 (1053)
T ss_pred cCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhh-c
Confidence 8999999999999999999999999999999999999999999999999999964311 235778877764 6
Q ss_pred CcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCCh
Q 002176 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGL 629 (956)
Q Consensus 551 ~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~ 629 (956)
++.++++++++..||||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||+||++|||
T Consensus 712 ~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred CHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 777888999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCChHHHHHHHHhhccc-ccccccCCCC--
Q 002176 630 SVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIW------KFDFPPFMVLIIAILNDGT-IMTISKDRVK-- 700 (956)
Q Consensus 630 ~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~------~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~-- 700 (956)
++|+.++++||++|+|++|++.|.+++|+..++.++++.++. ++|++|+|++|+|+++|++ .+++++|++.
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999999888777665542 3688899999999999975 6889888753
Q ss_pred ----CCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcc---cCCCCchhhHHHHHHHHHHHHHHH
Q 002176 701 ----PSPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS---SLHEKDIDDWKKLASAIYLQVSTI 772 (956)
Q Consensus 701 ----p~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~ 772 (956)
||+.++ +...+.++..++++|+++++.+++.|++.++. +.....+.. ....... .+ ...++++|...++
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~-~~a~t~~f~~l~~ 948 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG-FGSGNLGHDCDAHYHAGCN-DV-FKARSAAFATMTF 948 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccccccccccccccc-ch-hhhHHHHHHHHHH
Confidence 333332 33344566678889999999888777654321 100000000 0000000 01 2234455556666
Q ss_pred HHH-HHHHHhcCCCccccC------------------hhHHHHHHHHHHHHHHHHHHHhcc-c--cccccCchhHHHHHH
Q 002176 773 SQA-LIFVTRARSWSFVDR------------------PGLLLVLAFAVAQLIATLIAVYAN-W--SFAAIEGVGWGWAGV 830 (956)
Q Consensus 773 ~~~-~i~~~rs~~~~~~~~------------------~~~~l~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~ 830 (956)
+|. ++|++|+.+.+++.. .|.+++++++++.++. ++.+|.+ . .++.+.+++|.|+ .
T Consensus 949 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~~~~~p~~~~~~f~~~~l~~~w~-~ 1026 (1053)
T TIGR01523 949 CALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSA-FPTIYIPVINDDVFKHKPIGAEWG-L 1026 (1053)
T ss_pred HHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHH-HHHHhhhhhhhhhhccCCcchHHH-H
Confidence 665 678999865543321 3455655555444333 2333433 2 2556677778654 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 002176 831 VWLYNLIFYIPLDFIKFFIRYAL 853 (956)
Q Consensus 831 ~~~~~~~~~~~~~~~K~~~r~~~ 853 (956)
+++++++.++..|++|++.|++.
T Consensus 1027 ~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1027 AAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc
Confidence 77788888899999999877654
No 7
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-133 Score=1240.72 Aligned_cols=777 Identities=32% Similarity=0.503 Sum_probs=652.7
Q ss_pred cccccccCCHH--HHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Q 002176 14 EAVDLENVPME--EVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALAN 89 (956)
Q Consensus 14 ~~~~~~~~~~~--~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~ 89 (956)
+...||..+.+ ++...+.++ .+|||++|+.+|+++||+|++++.+ .+.|.+|+.+|++|+.++|+++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~- 97 (917)
T COG0474 19 TSETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVG- 97 (917)
T ss_pred CcccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 34578888888 999999887 5699999999999999999999655 688999999999999999999999999984
Q ss_pred CCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCe
Q 002176 90 GGGKPPDW----QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (956)
Q Consensus 90 ~~~~~~~~----~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~ 165 (956)
+| .++..|..++++|++++++||+++++++++|+++.+++++|+|||++++|+++||||||||.|++||+
T Consensus 98 ------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~ 171 (917)
T COG0474 98 ------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDV 171 (917)
T ss_pred ------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCc
Confidence 56 56678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEeecCCceeeccccCCcCeeeecCC--------------CCccccCCeeccCcEEEEEEEecchhHHHhHHHhh
Q 002176 166 IPADARLLEGDPLKIDQSALTGESLPVTKGP--------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 231 (956)
Q Consensus 166 VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~--------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~ 231 (956)
||||++|+++++++||||+|||||.|+.|.+ .|++|+||.+++|++.++|++||.+|++|+++.++
T Consensus 172 vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~ 251 (917)
T COG0474 172 VPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLL 251 (917)
T ss_pred cccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhh
Confidence 9999999999999999999999999999963 47899999999999999999999999999999999
Q ss_pred hcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHh
Q 002176 232 DST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSL 310 (956)
Q Consensus 232 ~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~ 310 (956)
... ...+|+|+.+++++.+++.+.++..++.+++.+...+..|.+.+..+++++++++|++||+.++++++.|+++|++
T Consensus 252 ~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~mak 331 (917)
T COG0474 252 PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMAK 331 (917)
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHh
Confidence 988 7899999999999887655444333333333322223337888999999999999999999999999999999999
Q ss_pred CCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCC---------HHHHHHHHHHhccc--c------
Q 002176 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD---------ADAVVLMAARASRV--E------ 373 (956)
Q Consensus 311 ~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~---------~~~~l~~aa~~~~~--~------ 373 (956)
+++++|+++++|+||++|+||||||||||+|+|+|.+++......+.+ ...++..++.|+.. .
T Consensus 332 ~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~ 411 (917)
T COG0474 332 DNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQ 411 (917)
T ss_pred ccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccccccCcee
Confidence 999999999999999999999999999999999999987542011222 11245666677633 2
Q ss_pred ccChHHHHHHHhcC------ChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC-------c
Q 002176 374 NQDAIDAAIVGMLA------DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-------K 440 (956)
Q Consensus 374 ~~~~i~~ai~~~~~------~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-------~ 440 (956)
.+||.|.|++..+. +....+..+++++++||||++|||++++++.+|+++.++|||||.|+++|+. .
T Consensus 412 ~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~ 491 (917)
T COG0474 412 AGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLT 491 (917)
T ss_pred cCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccC
Confidence 46999999998864 3344455667899999999999999999977788899999999999999984 3
Q ss_pred hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc----cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcC
Q 002176 441 SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK----ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITG 516 (956)
Q Consensus 441 ~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~----~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTG 516 (956)
++.++.+.+..++|+++||||+++|||.++..+. ++.|++|+|+|+++|+||||+|++++|+.|+++||+||||||
T Consensus 492 ~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTG 571 (917)
T COG0474 492 EEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITG 571 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECC
Confidence 4667889999999999999999999998765543 578999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccC
Q 002176 517 DQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVND 596 (956)
Q Consensus 517 D~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvND 596 (956)
||+.||++||++||+..+.....+++|.+++. +.+.++.+.+++++||||++|+||.+||++||++||+|+|||||+||
T Consensus 572 D~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~-l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvND 650 (917)
T COG0474 572 DHVETAIAIAKECGIEAEAESALVIDGAELDA-LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVND 650 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCCceeEeehHHhhh-cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchh
Confidence 99999999999999976643345888988875 66778999999999999999999999999999999999999999999
Q ss_pred hhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hh-c
Q 002176 597 APALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALI-WK-F 673 (956)
Q Consensus 597 apALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~-~~-~ 673 (956)
|||||+|||||||+ +|+|+||+||||++++|+|++|+.+|+|||++|+|++|++.|.+++|+..+++++++.++ ++ +
T Consensus 651 apALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~ 730 (917)
T COG0474 651 APALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFL 730 (917)
T ss_pred HHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999998 799999999999999999999999999999999999999999999999977777766544 33 5
Q ss_pred CCChHHHHHHHHhhccc-ccccccCC-----C-CCCCCCCc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcc
Q 002176 674 DFPPFMVLIIAILNDGT-IMTISKDR-----V-KPSPLPDS--WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRT 744 (956)
Q Consensus 674 ~~~p~~~l~i~~~~d~~-~~~l~~d~-----~-~p~~~p~~--~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~ 744 (956)
|+.|+|++|+|+++|++ +++++.++ + +||++|.+ |..+.++.+.+..|...++++++.|++.+..... ..
T Consensus 731 p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~-~~ 809 (917)
T COG0474 731 PLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIA-NT 809 (917)
T ss_pred cHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc
Confidence 89999999999999986 56776553 2 33445665 5555555556677888888877777666542110 00
Q ss_pred cCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccC---hhHHHHHHHHHHHHHH
Q 002176 745 FGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDR---PGLLLVLAFAVAQLIA 806 (956)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~---~~~~l~~~~~~~~~~~ 806 (956)
.+. .. .+....++.|+.++++.++..+.+|+.+.+|++. ++..++.++++..++.
T Consensus 810 ~~~-----~~--~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~ 867 (917)
T COG0474 810 LGL-----DL--FQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQ 867 (917)
T ss_pred cch-----hh--HHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHH
Confidence 010 00 0124556666666666667889999987776554 4555555544444333
No 8
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=3.3e-131 Score=1223.35 Aligned_cols=807 Identities=26% Similarity=0.400 Sum_probs=663.6
Q ss_pred cccccCCHHHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC
Q 002176 16 VDLENVPMEEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKP 94 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~ 94 (956)
...|+++.+++++.|+++.+|||++||++|+++||+|++++++ .+.|+.|+++|++|++|+|+++++++++.
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~------- 85 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT------- 85 (867)
T ss_pred HHHHhCCHHHHHHHhCCCCCCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH-------
Confidence 4567899999999999999999999999999999999999877 46788999999999999999999999987
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE------CCeEEEEeccCcCCCcEEEEeCCCeeec
Q 002176 95 PDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR------DGKWMEEDAAILVPGDIISVKLGDIIPA 168 (956)
Q Consensus 95 ~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R------dG~~~~I~~~~LvpGDiV~l~~Gd~VPa 168 (956)
++|.++++|++++++|..++++||++++++.++|+++.+++++|+| ||++++|+++||||||+|.+++||+|||
T Consensus 86 ~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPa 165 (867)
T TIGR01524 86 DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPA 165 (867)
T ss_pred hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcc
Confidence 4899999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ceEEeecCCceeeccccCCcCeeeecCCCC-------------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhccc
Q 002176 169 DARLLEGDPLKIDQSALTGESLPVTKGPGD-------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 235 (956)
Q Consensus 169 D~~ll~g~~l~VDeS~LTGES~pv~K~~g~-------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~ 235 (956)
||+|++|+++.||||+|||||.||.|.+|+ ++|+||.|.+|+++++|++||.+|++||+++++++..
T Consensus 166 Dg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~ 245 (867)
T TIGR01524 166 DARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERR 245 (867)
T ss_pred cEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCC
Confidence 999999998899999999999999998864 6999999999999999999999999999999998866
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcc
Q 002176 236 QQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAIT 315 (956)
Q Consensus 236 ~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilv 315 (956)
+++|+|+.++++++++....++.+++.++ .+.....+|.+.+..++++++++|||+||++++++++.|+++|+|+|+++
T Consensus 246 ~~t~lq~~~~~i~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilv 324 (867)
T TIGR01524 246 GQTAFDKGVKSVSKLLIRFMLVMVPVVLM-INGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324 (867)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHhee-hHHHhcCCHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEE
Confidence 67899999999988765433332222222 22223456777888899999999999999999999999999999999999
Q ss_pred cccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcccc--ccChHHHHHHHhcCCh--HH
Q 002176 316 KRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVE--NQDAIDAAIVGMLADP--KE 391 (956)
Q Consensus 316 k~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~--~~~~i~~ai~~~~~~~--~~ 391 (956)
|+++++|+||++|+||||||||||+|+|+|.+.. . ..+.+.++++.+++.++..+ ..||+|.|++.++.+. ..
T Consensus 325 k~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~ 401 (867)
T TIGR01524 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGETSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQ 401 (867)
T ss_pred ccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCCCHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhh
Confidence 9999999999999999999999999999998753 1 12445666777776654432 3599999998876532 22
Q ss_pred HhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc----------hHHHHHHHHHHHHHHHcCCeE
Q 002176 392 ARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK----------SEIERRVHAIIDKFAERGLRS 461 (956)
Q Consensus 392 ~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~----------~~~~~~~~~~i~~~a~~G~Rv 461 (956)
.+..++.++.+||||++|+|++++.+.++..+.++||+||.++++|+.. ++.++++.+.+++++++|+|+
T Consensus 402 ~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rv 481 (867)
T TIGR01524 402 TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRV 481 (867)
T ss_pred HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEE
Confidence 3456788899999999999999887666667889999999999999641 344567888899999999999
Q ss_pred EEEEEeecCCCCc---cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC
Q 002176 462 LAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS 538 (956)
Q Consensus 462 lavA~~~l~~~~~---~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~ 538 (956)
+++||++++.++. +..|++|+|+|+++|+||||||++++|++|+++||+|+|+||||+.||.++|+++||.. .
T Consensus 482 lavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~ 557 (867)
T TIGR01524 482 IAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----N 557 (867)
T ss_pred EEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----C
Confidence 9999998865432 12478899999999999999999999999999999999999999999999999999963 3
Q ss_pred ccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhh
Q 002176 539 SALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARS 618 (956)
Q Consensus 539 ~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~ 618 (956)
.+++|.+.+. +++.++.+.+++++||||++||||+++|+.||++|++|+|||||+||+||||+||||||||+|+|+||+
T Consensus 558 ~v~~g~~l~~-~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~ 636 (867)
T TIGR01524 558 DFLLGADIEE-LSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKE 636 (867)
T ss_pred CeeecHhhhh-CCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHH
Confidence 4677877764 677889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-cCCChHHHHHHHHhhcccccccccC
Q 002176 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWK-FDFPPFMVLIIAILNDGTIMTISKD 697 (956)
Q Consensus 619 aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~-~~~~p~~~l~i~~~~d~~~~~l~~d 697 (956)
+||+||+||||++|+.+|++||++|+||+||+.|.++.|+..++.+++..++++ +|++|+|++|+|+++|++.+++++|
T Consensus 637 aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~ 716 (867)
T TIGR01524 637 ASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWD 716 (867)
T ss_pred hCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999998887776655555 7999999999999999778999999
Q ss_pred CCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 002176 698 RVKPSP--LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA 775 (956)
Q Consensus 698 ~~~p~~--~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 775 (956)
++.+.. +|.+|+.+.+...+++.|++.++++++.|++.+... +.. +... ...+.+ .+|...+++|.
T Consensus 717 ~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------~~~---~~~~--~~~~~t-~~f~~~~~~~~ 784 (867)
T TIGR01524 717 KMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFVF------SAN---TVEE--QALFQS-GWFVVGLLSQT 784 (867)
T ss_pred CCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccc---chhh--hhHHHH-HHHHHHHHHHH
Confidence 986652 455577666777778889988877776666543211 000 0000 002233 34555566665
Q ss_pred -HHHHHhcCCCccccChhHHH-HHHHHHHHHHHHHHHHh-ccccccccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 776 -LIFVTRARSWSFVDRPGLLL-VLAFAVAQLIATLIAVY-ANWSFAAIEGV--GWGWAGVVWLYNLIFYIPLDFIKFFIR 850 (956)
Q Consensus 776 -~i~~~rs~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~K~~~r 850 (956)
.+|++|+++.+++.++..+. +++.++.+++.+++++. .+ .++.+.++ .|..|++++.++++ +..++.|.+..
T Consensus 785 ~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~-~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~ 861 (867)
T TIGR01524 785 LVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLG-HSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFYI 861 (867)
T ss_pred HHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhh-hhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 68999998755555544333 33333344444444431 01 12334443 33223333434433 56788886654
Q ss_pred Hhc
Q 002176 851 YAL 853 (956)
Q Consensus 851 ~~~ 853 (956)
+.+
T Consensus 862 ~~~ 864 (867)
T TIGR01524 862 RRF 864 (867)
T ss_pred Hhc
Confidence 443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=3e-126 Score=1195.58 Aligned_cols=836 Identities=22% Similarity=0.357 Sum_probs=669.6
Q ss_pred cccccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Q 002176 14 EAVDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIALANGG 91 (956)
Q Consensus 14 ~~~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~ 91 (956)
...+||..+.+++++.|+++ .+|||++||++|+++||+|++++++ .+.|+.|+++|++|++++|+++++++++.....
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 34789999999999999998 5699999999999999999998755 568889999999999999999999988764211
Q ss_pred ------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCe
Q 002176 92 ------GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDI 165 (956)
Q Consensus 92 ------~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~ 165 (956)
....+|.+++++++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.|++||+
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~ 172 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDR 172 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCE
Confidence 12247899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecceEEeecCCceeeccccCCcCeeeecCCCC----------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002176 166 IPADARLLEGDPLKIDQSALTGESLPVTKGPGD----------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 166 VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~----------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
|||||+|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|++.++|++||.+|++||+++++++.
T Consensus 173 IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~ 252 (997)
T TIGR01106 173 IPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLE 252 (997)
T ss_pred EeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcc
Confidence 999999999988899999999999999998864 699999999999999999999999999999998776
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002176 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++|+++.++++...+...+++..++.+ +.+...+.+|.+.+..++++++++|||+||++++++++.++++|+++|++
T Consensus 253 ~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~il 331 (997)
T TIGR01106 253 NGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCL 331 (997)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcE
Confidence 56799999999988775443322222222 22223345677788888999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeee--cc-CC--------CC-----HHHHHHHHHHhccc------
Q 002176 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--FA-KG--------VD-----ADAVVLMAARASRV------ 372 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~~--------~~-----~~~~l~~aa~~~~~------ 372 (956)
+|+++++|+||++|+||||||||||+|+|+|.++++.. +. .+ .+ .+.++..++.|+..
T Consensus 332 vk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~ 411 (997)
T TIGR01106 332 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQ 411 (997)
T ss_pred ecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeecccc
Confidence 99999999999999999999999999999999876421 00 00 11 12455566666431
Q ss_pred ---------cccChHHHHHHHhcC----ChHHHhhccceeEeecCCCCCcceEEEEEc--C-CCcEEEEEeCcHHHHHHh
Q 002176 373 ---------ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYID--S-EGKMHRVSKGAPEQILNL 436 (956)
Q Consensus 373 ---------~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~--~-~g~~~~~~KGa~e~il~~ 436 (956)
..+||.|.|++.++. +..+.+..++.++.+||+|++|||++++.. . +++++.++|||||.|+++
T Consensus 412 ~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~ 491 (997)
T TIGR01106 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILER 491 (997)
T ss_pred CCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHH
Confidence 125899999988753 234456678899999999999999888753 2 246788999999999999
Q ss_pred hcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc--------c---CCCCCceEEEEeccCCCCCc
Q 002176 437 VRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK--------E---SSGGPWQFIGLMPLFDPPRH 495 (956)
Q Consensus 437 ~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~--------~---~~e~~l~~lGli~~~D~lR~ 495 (956)
|+. +++.++.+.+.+++|+++|+||+++||+.++.++. + ..|++|+|+|+++++||||+
T Consensus 492 c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~ 571 (997)
T TIGR01106 492 CSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRA 571 (997)
T ss_pred hhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChH
Confidence 963 23456778889999999999999999998864321 1 12789999999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------------------CccccCCccccccCcc
Q 002176 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------------------SSALLGQNKDESIVAL 553 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------------------~~~l~g~~~~~~~~~~ 553 (956)
|++++|++|+++||+|+|+|||++.+|.++|+++|+..+... ..+++|.+++. +.+.
T Consensus 572 ~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~-l~~~ 650 (997)
T TIGR01106 572 AVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD-MTSE 650 (997)
T ss_pred HHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh-CCHH
Confidence 999999999999999999999999999999999999643210 24677777764 5667
Q ss_pred cHHHHhhhcc--eEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChh
Q 002176 554 PVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 554 ~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~ 630 (956)
++++.+++++ ||||++|+||++||+.||++|++|+|||||+||+||||+|||||||| +|+|+||++||+||+||||+
T Consensus 651 el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~ 730 (997)
T TIGR01106 651 QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFA 730 (997)
T ss_pred HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHH
Confidence 8888888775 99999999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhcCCChHHHHHHHHhhccc-ccccccCCCC------CC
Q 002176 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALI-WKFDFPPFMVLIIAILNDGT-IMTISKDRVK------PS 702 (956)
Q Consensus 631 ~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~-~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~------p~ 702 (956)
+|+.+|++||++|+|++|++.|.++.|+..++.++++.++ .+.|++|+|++|+|+++|++ ++++++|++. ||
T Consensus 731 ~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P 810 (997)
T TIGR01106 731 SIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810 (997)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCC
Confidence 9999999999999999999999999999988877766554 45688999999999999985 6889887763 33
Q ss_pred CCCC--ccchHHHH-HHHHHHHHHHHHHHHHHHHHHHh-cCcCCc-ccCc---------ccCCCCchhhH--------HH
Q 002176 703 PLPD--SWKLAEIF-TTGVILGGYLAMMTVIFFWAAYQ-TDFFPR-TFGV---------SSLHEKDIDDW--------KK 760 (956)
Q Consensus 703 ~~p~--~~~~~~~~-~~~~~~G~~~~~~~~~~f~~~~~-~~~~~~-~~~~---------~~~~~~~~~~~--------~~ 760 (956)
+.|+ ....+..+ ...+..|+++++..++.|++.+. .+|... .++. .+..+.....| ..
T Consensus 811 ~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (997)
T TIGR01106 811 RNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEF 890 (997)
T ss_pred cCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhh
Confidence 2222 22222333 33456698998888877665442 122111 1111 00000100000 01
Q ss_pred HHHHHHHHHHHHHHH-HHHHHhcCCCccc--cChhHHHHHHHHHHHHHHHHHHHhcc--ccccccCchhHHHHHHHHHHH
Q 002176 761 LASAIYLQVSTISQA-LIFVTRARSWSFV--DRPGLLLVLAFAVAQLIATLIAVYAN--WSFAAIEGVGWGWAGVVWLYN 835 (956)
Q Consensus 761 ~~~~~~~~~~i~~~~-~i~~~rs~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 835 (956)
..++++|...+++|. ++|++|+++.+++ ..+|.+++.++++..++..++ .|.+ -.++.+.+.+|.+|+.+++++
T Consensus 891 ~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~-~~~p~~~~~f~~~~l~~~~w~~~~~~~ 969 (997)
T TIGR01106 891 TCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFL-SYCPGMGVALRMYPLKPTWWFCAFPYS 969 (997)
T ss_pred hhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHH-HHhhhhHHHhccccCCHHHHHHHHHHH
Confidence 345667777777786 6799999766543 234556665555444443333 3322 234556777888888888899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 002176 836 LIFYIPLDFIKFFIRYA 852 (956)
Q Consensus 836 ~~~~~~~~~~K~~~r~~ 852 (956)
++.++..++.|++.|++
T Consensus 970 ~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 970 LLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 98888899999887754
No 10
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.8e-125 Score=1179.07 Aligned_cols=799 Identities=27% Similarity=0.404 Sum_probs=661.1
Q ss_pred cccccCCHHHHHHHcCCC-CCCCC-HHHHHHHHHhcCCCccCccc-ccHHHHHHHHH-HhhHHHHHHHHHHHHHHHhcCC
Q 002176 16 VDLENVPMEEVFETLRCN-KEGLS-TEAAEERLTIFGYNKLEEKQ-ESKILKFLGFM-WNPLSWVMEAAAIMAIALANGG 91 (956)
Q Consensus 16 ~~~~~~~~~~~~~~l~~~-~~GLt-~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~-~~p~~~~l~~aails~~~~~~~ 91 (956)
.+||.++.+++++.|+++ .+||| ++|+++|+++||+|++++++ ++.|..|+++| ++|++++|++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 479999999999999998 46999 99999999999999999776 67788899999 999999999999999988
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceE
Q 002176 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADAR 171 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ 171 (956)
++|.+++.|++++++++.++++||+++++++++|+++.+++++|+|||++++|+++||||||+|.+++||+|||||+
T Consensus 78 ---g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ 154 (884)
T TIGR01522 78 ---GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLR 154 (884)
T ss_pred ---cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEE
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCceeeccccCCcCeeeecCCCC--------------ccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cc
Q 002176 172 LLEGDPLKIDQSALTGESLPVTKGPGD--------------SVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQ 236 (956)
Q Consensus 172 ll~g~~l~VDeS~LTGES~pv~K~~g~--------------~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~ 236 (956)
|++|+.+.||||+|||||.|+.|.+++ ++|+||.|.+|+++++|++||.+|++||+++++++. .+
T Consensus 155 ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~ 234 (884)
T TIGR01522 155 IVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234 (884)
T ss_pred EEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCC
Confidence 999987899999999999999999863 799999999999999999999999999999999876 56
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCccc
Q 002176 237 QGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITK 316 (956)
Q Consensus 237 ~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk 316 (956)
++|+|+.+++++.++....++.+++.+++.| ..+.++.+.+...+++++++|||+||++++++++.|++||+++|+++|
T Consensus 235 kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk 313 (884)
T TIGR01522 235 KTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVR 313 (884)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCccc
Confidence 7999999999988754433222222222222 334567788888999999999999999999999999999999999999
Q ss_pred ccchhhhhcCceEEeeccccceeeCceeEEeeeeee-cc---C--CC-------------------CHHHHHHHHHHhcc
Q 002176 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI-FA---K--GV-------------------DADAVVLMAARASR 371 (956)
Q Consensus 317 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~-~~---~--~~-------------------~~~~~l~~aa~~~~ 371 (956)
+++++|+||++|+||||||||||+|+|+|.+++... .. . +. ...+++..++.|+.
T Consensus 314 ~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~ 393 (884)
T TIGR01522 314 KLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNN 393 (884)
T ss_pred chHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCC
Confidence 999999999999999999999999999998865311 00 0 00 01234555555543
Q ss_pred cc--------ccChHHHHHHHhcCCh--HHHhhccceeEeecCCCCCcceEEEEEc-CCCcEEEEEeCcHHHHHHhhcC-
Q 002176 372 VE--------NQDAIDAAIVGMLADP--KEARANIQEVHFLPFNPTDKRTALTYID-SEGKMHRVSKGAPEQILNLVRN- 439 (956)
Q Consensus 372 ~~--------~~~~i~~ai~~~~~~~--~~~~~~~~~l~~~pF~s~~kr~sv~~~~-~~g~~~~~~KGa~e~il~~~~~- 439 (956)
.. .+||+|.|++.++... ...+..++.++++||+|.+|||++.++. .+++.+.++|||||.|+..|+.
T Consensus 394 ~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~ 473 (884)
T TIGR01522 394 AKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYY 473 (884)
T ss_pred CeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhh
Confidence 21 2479999998876422 2334567889999999999999998875 3567889999999999999963
Q ss_pred ----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC
Q 002176 440 ----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV 509 (956)
Q Consensus 440 ----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI 509 (956)
+++.++++.+.+++++++|+|++++||+++ +.+|+|+|+++++||||||++++|++|+++||
T Consensus 474 ~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi 545 (884)
T TIGR01522 474 QKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGV 545 (884)
T ss_pred hhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC--------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCC
Confidence 134466788889999999999999999974 45799999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEE
Q 002176 510 NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGM 589 (956)
Q Consensus 510 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m 589 (956)
+++|+|||++.||.++|+++||..+ ...+++|.+.+. +++.++++++++.+||||++|+||.++|+.||++|++|+|
T Consensus 546 ~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~-~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~m 622 (884)
T TIGR01522 546 RIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDA-MDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAM 622 (884)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHh-CCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEE
Confidence 9999999999999999999999754 234677777764 6777899999999999999999999999999999999999
Q ss_pred EcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 590 TGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (956)
Q Consensus 590 ~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~ 668 (956)
||||+||+||||+|||||||| +|+|+|+++||++|++|||++|+.++++||++|+||+|++.|.++.|+..++.+++..
T Consensus 623 vGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~ 702 (884)
T TIGR01522 623 TGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALAT 702 (884)
T ss_pred ECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 999999999999999999999 7999999999999999999999999999999999999999999999998777655443
Q ss_pred -HhhhcCCChHHHHHHHHhhccc-ccccccCCCC------CCCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 002176 669 -LIWKFDFPPFMVLIIAILNDGT-IMTISKDRVK------PSPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTD 739 (956)
Q Consensus 669 -~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~------p~~~p~~-~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~ 739 (956)
+..+.|++|+|++|+|+++|++ .+++++|++. ||++++. ...+.++..+++.|+++++++++.|++.+..
T Consensus 703 ~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 781 (884)
T TIGR01522 703 LMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD- 781 (884)
T ss_pred HHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence 3456799999999999999987 4888887753 3333333 2234566777888999888877666654311
Q ss_pred cCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---ChhHHHHHHHHHHHHHHHHHHHhcc-
Q 002176 740 FFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAVYAN- 814 (956)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~- 814 (956)
+ ... ...++++|...+++|. +.|++|+++.++++ ..|.++++++++..++. ++.+|.+
T Consensus 782 ------~------~~~----~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~p~ 844 (884)
T TIGR01522 782 ------G------VIT----ARDTTMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQ-LLVIYFPP 844 (884)
T ss_pred ------C------cch----hhHHHHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0 011 2233445555566665 67999997766553 23455555544433332 2233322
Q ss_pred -ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 815 -WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRY 851 (956)
Q Consensus 815 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~ 851 (956)
-.++.+.+.+|..|+.+++++++.++..+++|++.|.
T Consensus 845 ~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 845 LQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1345567788888888899999999999999988764
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=2.1e-124 Score=1176.04 Aligned_cols=816 Identities=22% Similarity=0.339 Sum_probs=647.5
Q ss_pred CHHHHHHHcCCC-CCCCC--HHHHHHHHHhcCCCccCcccc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC------C
Q 002176 22 PMEEVFETLRCN-KEGLS--TEAAEERLTIFGYNKLEEKQE-SKILKFLGFMWNPLSWVMEAAAIMAIALANG------G 91 (956)
Q Consensus 22 ~~~~~~~~l~~~-~~GLt--~~e~~~r~~~~G~N~l~~~~~-~~~~~~l~~~~~p~~~~l~~aails~~~~~~------~ 91 (956)
+.++++++|+++ ++||| ++||++|+++||+|++++++. +.|..|+++|++|++++|+++++++++++.. .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999 56999 999999999999999998875 6678899999999999999999999997632 2
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecce
Q 002176 92 GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMAS-LAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADA 170 (956)
Q Consensus 92 ~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~-~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~ 170 (956)
+...+|.++++|+++++++.++++++|++++++.++|++. .+++++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2234799999999999999999999999999999999864 477999999999999999999999999999999999999
Q ss_pred EEeecCCceeeccccCCcCeeeecCCCCc--cccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccchHHHHHHHHH
Q 002176 171 RLLEGDPLKIDQSALTGESLPVTKGPGDS--VYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVLTAIG 248 (956)
Q Consensus 171 ~ll~g~~l~VDeS~LTGES~pv~K~~g~~--v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~~~i~ 248 (956)
+|++|+.+.||||+|||||.|+.|.+++. +|+||.|.+|+++++|++||.+|++||+++++++..+++|+++.++++.
T Consensus 203 ~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~ 282 (941)
T TIGR01517 203 VFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELA 282 (941)
T ss_pred EEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHH
Confidence 99999778999999999999999998765 9999999999999999999999999999999987766789999999887
Q ss_pred HHHHHHHHHHHHHHHH---hHhhcc---c---------cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCC
Q 002176 249 NFCICSIAVGMIVEII---VMYPIQ---H---------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (956)
Q Consensus 249 ~~~~~~i~i~~~~~~~---~~~~~~---~---------~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~i 313 (956)
.++...+++.+++.++ +.+... . .++.+.+..++++++++|||+||++++++++.++++|+++|+
T Consensus 283 ~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~i 362 (941)
T TIGR01517 283 GLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNN 362 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 7653322211111111 111111 1 134556778889999999999999999999999999999999
Q ss_pred cccccchhhhhcCceEEeeccccceeeCceeEEeeeeeec--c-CC----CC--HHHHHHHHHHh-ccc-----------
Q 002176 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIF--A-KG----VD--ADAVVLMAARA-SRV----------- 372 (956)
Q Consensus 314 lvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~--~-~~----~~--~~~~l~~aa~~-~~~----------- 372 (956)
++|+++++|+||++|+||||||||||+|+|+|.+++.... . .+ .+ ..+++..++.+ +..
T Consensus 363 lvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~ 442 (941)
T TIGR01517 363 LVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRA 442 (941)
T ss_pred EEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccc
Confidence 9999999999999999999999999999999988754211 0 00 11 11223333332 221
Q ss_pred cccChHHHHHHHhcC----ChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc--------
Q 002176 373 ENQDAIDAAIVGMLA----DPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-------- 440 (956)
Q Consensus 373 ~~~~~i~~ai~~~~~----~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-------- 440 (956)
..+||.|.|++.++. +..+.+..++.++.+||+|++|||+++++..+++++.++|||||.++++|+..
T Consensus 443 ~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~ 522 (941)
T TIGR01517 443 FIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEAT 522 (941)
T ss_pred cCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcc
Confidence 125799999988753 23334456777889999999999999988766778899999999999999641
Q ss_pred --hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc---cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEc
Q 002176 441 --SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK---ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMIT 515 (956)
Q Consensus 441 --~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~---~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miT 515 (956)
.+.++++.+.+++++++|+|++++||++++.++. +..|++|+|+|+++++||||||++++|++|+++||+|+|+|
T Consensus 523 ~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miT 602 (941)
T TIGR01517 523 PISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVT 602 (941)
T ss_pred cCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEEC
Confidence 1235678888999999999999999999864332 23478999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCcc
Q 002176 516 GDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (956)
Q Consensus 516 GD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvN 595 (956)
|||+.||.++|++|||..+ ...+++|.+.+. +.++++++++++.+||||++|+||+++|+.||++|++|+|||||+|
T Consensus 603 GD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~-l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvN 679 (941)
T TIGR01517 603 GDNIDTAKAIARNCGILTF--GGLAMEGKEFRR-LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTN 679 (941)
T ss_pred CCChHHHHHHHHHcCCCCC--CceEeeHHHhhh-CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 9999999999999999754 235788877764 6677899999999999999999999999999999999999999999
Q ss_pred ChhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhhc
Q 002176 596 DAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKF 673 (956)
Q Consensus 596 DapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~-~~~~~ 673 (956)
|+||||+|||||||| +|+|+|+++||+||++|+|++|+.++++||++|+|++|++.|.+++|+..++..++.. +..++
T Consensus 680 DapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~ 759 (941)
T TIGR01517 680 DAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTS 759 (941)
T ss_pred hHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999 9999999999999999999999999999999999999999999999998776655543 34567
Q ss_pred CCChHHHHHHHHhhccc-ccccccCCCCC------CCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCccc
Q 002176 674 DFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTF 745 (956)
Q Consensus 674 ~~~p~~~l~i~~~~d~~-~~~l~~d~~~p------~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~ 745 (956)
|++|+|++|+|+++|.+ .+++++|++.+ |++++ ....+.++..++.+|++++++.++.|++... ++.. .
T Consensus 760 pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~-~ 836 (941)
T TIGR01517 760 PLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDV-S 836 (941)
T ss_pred cHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhcc-c
Confidence 99999999999999975 68888887632 22222 2223456677788899988888776665431 1110 0
Q ss_pred Cccc-CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ccccC--hhHHHHHHHHHHHHHHHHHHHhccccccccC
Q 002176 746 GVSS-LHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSW-SFVDR--PGLLLVLAFAVAQLIATLIAVYANWSFAAIE 821 (956)
Q Consensus 746 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (956)
+... ...... ...++.|.++.+...++.|++|+.+. +++.. .|.+++.++++..++..++..+.+ .++.+.
T Consensus 837 ~~~~~~~~~~~----~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~-~~f~~~ 911 (941)
T TIGR01517 837 GPDEITSHQQG----ELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGG-SFFSTV 911 (941)
T ss_pred Ccccccccccc----hhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHHHHHH-HHhccc
Confidence 0000 000111 23344444443333346799998653 32211 233444444433333322222222 244567
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 822 GVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (956)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~K~~ 848 (956)
+++|..|+.+++++++.++..++.|++
T Consensus 912 ~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 912 SLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 778888888888998888888888876
No 12
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-123 Score=1057.12 Aligned_cols=813 Identities=22% Similarity=0.324 Sum_probs=627.2
Q ss_pred CHHHHHHHcCCCC-CCCCH--HHHHHHHHhcCCCccCcccccHH-HHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CCCCC
Q 002176 22 PMEEVFETLRCNK-EGLST--EAAEERLTIFGYNKLEEKQESKI-LKFLGFMWNPLSWVMEAAAIMAIALANGG-GKPPD 96 (956)
Q Consensus 22 ~~~~~~~~l~~~~-~GLt~--~e~~~r~~~~G~N~l~~~~~~~~-~~~l~~~~~p~~~~l~~aails~~~~~~~-~~~~~ 96 (956)
..++++++|++++ +||+. +|.++|++.||.|.+|+++++.| ...++.+.+.-..+|.++|++|+.+++.. +.+..
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~G 181 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDG 181 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcc
Confidence 4789999999995 69987 88899999999999999886555 45568888888899999999999998743 44678
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeec
Q 002176 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMA-SLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (956)
Q Consensus 97 ~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~-~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g 175 (956)
|++++.|++.+++..++..+.+|+.++..+.|.+ ....+..|+|||+.++|+..|||||||+.|+.||.|||||++++|
T Consensus 182 W~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~g 261 (1034)
T KOG0204|consen 182 WIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQG 261 (1034)
T ss_pred cccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEec
Confidence 9999998776544334444444444444444432 334678999999999999999999999999999999999999999
Q ss_pred CCceeeccccCCcCeeeecCC--CCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHH
Q 002176 176 DPLKIDQSALTGESLPVTKGP--GDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCI 252 (956)
Q Consensus 176 ~~l~VDeS~LTGES~pv~K~~--g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~ 252 (956)
++|.+|||+|||||.++.|.+ +.+++|||++.+|.++++|+++|.+|+.|+++.++... ++++|+|-.+++++...-
T Consensus 262 n~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Ig 341 (1034)
T KOG0204|consen 262 NSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIG 341 (1034)
T ss_pred cceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHH
Confidence 999999999999999999987 56899999999999999999999999999999999877 588999999888765421
Q ss_pred ---HHHHHHHHHHHHhHhhccc-----c---Cccc----hHHH----HHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCC
Q 002176 253 ---CSIAVGMIVEIIVMYPIQH-----R---KYRP----GIDN----LLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGA 313 (956)
Q Consensus 253 ---~~i~i~~~~~~~~~~~~~~-----~---~~~~----~~~~----~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~i 313 (956)
+.++...++.++..|.... . .+.. .+.. .+.++++++|+|||+++++++|+++++|.+.+.
T Consensus 342 k~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~ 421 (1034)
T KOG0204|consen 342 KIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNN 421 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchh
Confidence 1112222222222222211 1 1111 1222 234577899999999999999999999999999
Q ss_pred cccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccC--------CCCHHH--HHHHH-HHhcc-----------
Q 002176 314 ITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK--------GVDADA--VVLMA-ARASR----------- 371 (956)
Q Consensus 314 lvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~--------~~~~~~--~l~~a-a~~~~----------- 371 (956)
+||+++|+|+||+.++||+|||||||+|+|+|.+.++..... ..++.. ++..+ +..+.
T Consensus 422 LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~ 501 (1034)
T KOG0204|consen 422 LVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGE 501 (1034)
T ss_pred HHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCc
Confidence 999999999999999999999999999999999877632211 122211 11111 11110
Q ss_pred --ccccChHHHHHHHhc----CChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC------
Q 002176 372 --VENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN------ 439 (956)
Q Consensus 372 --~~~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~------ 439 (956)
...++|.+.|+++.. .+.+..|...+.++.+||||.+|+|+++++.++|..+.++|||+|.++..|..
T Consensus 502 ~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g 581 (1034)
T KOG0204|consen 502 QPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNG 581 (1034)
T ss_pred CccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCC
Confidence 012478999998764 35566777888999999999999999999977776359999999999999974
Q ss_pred -----chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC-------C-ccCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002176 440 -----KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG-------R-KESSGGPWQFIGLMPLFDPPRHDSAETIRRALN 506 (956)
Q Consensus 440 -----~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~-------~-~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~ 506 (956)
+++-++.+.+.++.||.+|+|++++||++.... + .+..+.+++++|+++++||+|||++++|+.|++
T Consensus 582 ~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~ 661 (1034)
T KOG0204|consen 582 ELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQR 661 (1034)
T ss_pred CEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHH
Confidence 234566889999999999999999999985332 1 245678999999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCE
Q 002176 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHI 586 (956)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~ 586 (956)
|||+|.|+||||..||++||++|||.++...-.++.|.++.+ +++++.++++.+.+|+||.+|.||+.+|+.|+++||+
T Consensus 662 AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~-~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~V 740 (1034)
T KOG0204|consen 662 AGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE-LSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEV 740 (1034)
T ss_pred cCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-cCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcE
Confidence 999999999999999999999999988765567888988874 8889999999999999999999999999999999999
Q ss_pred EEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 587 CGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFM 665 (956)
Q Consensus 587 V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~ 665 (956)
||+||||.||+||||+||||.||| .|||+|||+|||||+||||++|++++.|||+.|.||+||++|+++.|+..++..+
T Consensus 741 VAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~f 820 (1034)
T KOG0204|consen 741 VAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNF 820 (1034)
T ss_pred EEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhh
Confidence 999999999999999999999999 9999999999999999999999999999999999999999999999986444433
Q ss_pred H-HHHhhhcCCChHHHHHHHHhhccc-ccccccCCCCC-------CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 666 L-LALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKP-------SPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAY 736 (956)
Q Consensus 666 ~-~~~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p-------~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~ 736 (956)
. ....-..|++.+|+||+|+++|.+ +++++.|++.+ -.|..+...+-++...+.+.+|+.++.+.+.+...
T Consensus 821 v~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~ 900 (1034)
T KOG0204|consen 821 VSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK 900 (1034)
T ss_pred hhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 3 434445899999999999999987 69999887632 22444555556777778888898877776554433
Q ss_pred hcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcCC-Ccc----ccChhHHHHHHHHHHHHHHHHHH
Q 002176 737 QTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARS-WSF----VDRPGLLLVLAFAVAQLIATLIA 810 (956)
Q Consensus 737 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~-~~~----~~~~~~~l~~~~~~~~~~~~~~~ 810 (956)
. . |++.....+++ ....++.|-..+++|. .-|+.|.-. ... ++|+ ++++++...+++..+.
T Consensus 901 ~--i----f~~~~~~~~~~----~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~---~F~~ii~~T~v~QviI 967 (1034)
T KOG0204|consen 901 S--I----FGLNGPLHSPP----SVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNR---LFCVIITITVVSQVII 967 (1034)
T ss_pred h--h----hccCCCCCCch----hhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCc---eEEEEeeeeeehhhhh
Confidence 1 1 22222222222 2332333344455554 568888732 122 2222 2222222222222222
Q ss_pred HhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 811 VYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (956)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 848 (956)
+...-.++...+++|..|+++..+.++.++.-.+.|.+
T Consensus 968 veF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 968 VEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 22112245678888888888887777776665555543
No 13
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.9e-116 Score=1097.40 Aligned_cols=782 Identities=28% Similarity=0.389 Sum_probs=616.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC
Q 002176 65 FLGFMWNPLSWVMEAAAIMAIALANGG---GKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD 141 (956)
Q Consensus 65 ~l~~~~~p~~~~l~~aails~~~~~~~---~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd 141 (956)
+++||++|++++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|++..+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 478999999999999999999986422 12258999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC-------------CccccCCeecc
Q 002176 142 GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG-------------DSVYSGSTCKQ 208 (956)
Q Consensus 142 G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g-------------~~v~~Gs~v~~ 208 (956)
|++++|+++||||||+|.|++||+|||||+|++|+.+.||||+|||||.|+.|.++ +++|+||.+.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~ 160 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVA 160 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEec
Confidence 99999999999999999999999999999999998789999999999999999875 78999999999
Q ss_pred CcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-c----ccCcc----chH
Q 002176 209 GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-Q----HRKYR----PGI 278 (956)
Q Consensus 209 G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-~----~~~~~----~~~ 278 (956)
|+++++|++||.+|++||++++++.. .+++|+|+.+++++.++...+++.+++.+++.... . ..+|. ..+
T Consensus 161 G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (917)
T TIGR01116 161 GKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYF 240 (917)
T ss_pred ceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHH
Confidence 99999999999999999999988776 66899999999998765443322222222211111 0 11221 233
Q ss_pred HHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee------
Q 002176 279 DNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI------ 352 (956)
Q Consensus 279 ~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~------ 352 (956)
..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 241 ~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 320 (917)
T TIGR01116 241 KIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSL 320 (917)
T ss_pred HHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccccc
Confidence 34567899999999999999999999999999999999999999999999999999999999999998875311
Q ss_pred -----ccCCCC-------------------HHHHHHHHHHhcccc------------ccChHHHHHHHhcCChH------
Q 002176 353 -----FAKGVD-------------------ADAVVLMAARASRVE------------NQDAIDAAIVGMLADPK------ 390 (956)
Q Consensus 353 -----~~~~~~-------------------~~~~l~~aa~~~~~~------------~~~~i~~ai~~~~~~~~------ 390 (956)
...+++ .+.++..++.|+... .+||.|.|++.++.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~ 400 (917)
T TIGR01116 321 NEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKN 400 (917)
T ss_pred ceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhc
Confidence 000000 123455566665321 25899999987642210
Q ss_pred --------------HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC-----------chHHHH
Q 002176 391 --------------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN-----------KSEIER 445 (956)
Q Consensus 391 --------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~-----------~~~~~~ 445 (956)
..+..++.++.+||||++|||++++++ +++++.++|||||.|+++|+. +++.++
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~ 479 (917)
T TIGR01116 401 GVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKN 479 (917)
T ss_pred ccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHH
Confidence 124457789999999999999999875 467889999999999999963 134567
Q ss_pred HHHHHHHHHHH-cCCeEEEEEEeecCCCC----------ccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEE
Q 002176 446 RVHAIIDKFAE-RGLRSLAVAYQEVPDGR----------KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMI 514 (956)
Q Consensus 446 ~~~~~i~~~a~-~G~RvlavA~~~l~~~~----------~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~mi 514 (956)
++.+.+++|++ +|+||+++|||.++.++ .+..|++|+|+|+++++||||+|++++|++||++||+++|+
T Consensus 480 ~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~mi 559 (917)
T TIGR01116 480 TILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMI 559 (917)
T ss_pred HHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEe
Confidence 78889999999 99999999999986421 13458899999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcC
Q 002176 515 TGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGD 592 (956)
Q Consensus 515 TGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GD 592 (956)
|||++.||.++|+++|+..+... ...++|.+.+. +.+.+..+...+..||||++|+||.++|+.+|+.|++|+|+||
T Consensus 560 TGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~-~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGD 638 (917)
T TIGR01116 560 TGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDE-MGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGD 638 (917)
T ss_pred cCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhh-CCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecC
Confidence 99999999999999999753211 23456666543 5566677778888999999999999999999999999999999
Q ss_pred CccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh
Q 002176 593 GVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IW 671 (956)
Q Consensus 593 GvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~ 671 (956)
|+||+||||+||||||||+|+|+||++||+++.+|||++|++++++||++|+|++|++.|.+++|+..++..+++.+ .+
T Consensus 639 G~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 718 (917)
T TIGR01116 639 GVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALGI 718 (917)
T ss_pred CcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887766544 35
Q ss_pred hcCCChHHHHHHHHhhccc-ccccccCCCC------CCCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcCC
Q 002176 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVK------PSPLPD-SWKLAEIFTTGVILGGYLAMMTVIFFWAAYQT-DFFP 742 (956)
Q Consensus 672 ~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~------p~~~p~-~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~-~~~~ 742 (956)
+.|++|+|++|+|+++|++ +++++.+++. ||+.+. ....+..+..+++.|+++++++++.|++.+.. ++..
T Consensus 719 ~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 798 (917)
T TIGR01116 719 PEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTG 798 (917)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 5799999999999999965 5788877652 333333 23344677788889999998877666544321 2111
Q ss_pred c--cc--CcccCCCCch---hhHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc---ChhHHHHHHHHHHHHHHHHHHH
Q 002176 743 R--TF--GVSSLHEKDI---DDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD---RPGLLLVLAFAVAQLIATLIAV 811 (956)
Q Consensus 743 ~--~~--~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~ 811 (956)
. .. +..+..+... ... ...++++|...+++|. +.|++|+++.+++. ..|.|+++++++..++. ++..
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~ 876 (917)
T TIGR01116 799 CDEDSFTTCPDFEDPDCYVFEGK-QPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLIL 876 (917)
T ss_pred ccccccccccccccccccccccc-cchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHH
Confidence 0 00 0000000000 000 2234556666666775 67999997666443 13455555544433332 2223
Q ss_pred hcc--ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 812 YAN--WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIR 850 (956)
Q Consensus 812 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r 850 (956)
|.+ -.++.+.+.+|..|+++++++++.++..+++|++.|
T Consensus 877 ~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 877 YVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 322 134567788899999999999999999999998753
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-118 Score=1018.29 Aligned_cols=849 Identities=24% Similarity=0.393 Sum_probs=691.2
Q ss_pred ccHHHhhccc-cccccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHH
Q 002176 6 ETMEAVLKEA-VDLENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAI 82 (956)
Q Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aai 82 (956)
-++++.++|. +|.|++|.+|+.++++++ .+|||.++|.+++++-|||.+++|+ .+.|.+|++|+++.+..+++++++
T Consensus 26 ~~l~~~k~e~~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~ 105 (1019)
T KOG0203|consen 26 KELDDLKKEVSMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAI 105 (1019)
T ss_pred hhHHHHhhheeeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHH
Confidence 4688888988 999999999999999999 6799999999999999999998777 678889999999999999999999
Q ss_pred HHHHHhcCC-----CCCCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCc
Q 002176 83 MAIALANGG-----GKPPD-WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGD 156 (956)
Q Consensus 83 ls~~~~~~~-----~~~~~-~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGD 156 (956)
++++.+... ..+.+ .+-+.++..++++..+..|+||.+..+-++++.++.|+.+.|+|||+...+.+++|||||
T Consensus 106 l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD 185 (1019)
T KOG0203|consen 106 LCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGD 185 (1019)
T ss_pred HHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhccccc
Confidence 998875321 11122 222233334455677889999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCC----------CCccccCCeeccCcEEEEEEEecchhHHHh
Q 002176 157 IISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGP----------GDSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 157 iV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~----------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gk 226 (956)
+|.++-||+||||.|++++..+++|+|+|||||+|....+ .|+.|.+|.+.+|.++++|++||.+|.+|+
T Consensus 186 ~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ 265 (1019)
T KOG0203|consen 186 LVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGR 265 (1019)
T ss_pred ceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEecCCceEEee
Confidence 9999999999999999999999999999999999999876 367999999999999999999999999999
Q ss_pred HHHhhhc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002176 227 AAHLVDS-TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (956)
Q Consensus 227 i~~l~~~-~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~ 305 (956)
|+.+... ...++|+++.++.+..+... +++.+.+.++..-...++.|..++..++.++++.+|++||+.+++.++.-+
T Consensus 266 ia~l~~~~~~~~t~~~~ei~~fi~~it~-vAi~~~i~fF~~~~~~gy~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlta 344 (1019)
T KOG0203|consen 266 IASLASGLEDGKTPIAKEIEHFIHIITG-VAIFLGISFFILALILGYEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTA 344 (1019)
T ss_pred hhhhhccCCCCCCcchhhhhchHHHHHH-HHHHHHHHHHHHHHhhcchhHHHhhhhheeEEecCcCCccceehhhHHHHH
Confidence 9998765 36788899988887665322 222222222222223367778888888889999999999999999999999
Q ss_pred HHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccC----------------CCCHHHHHHHHHHh
Q 002176 306 HRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK----------------GVDADAVVLMAARA 369 (956)
Q Consensus 306 ~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~----------------~~~~~~~l~~aa~~ 369 (956)
+||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+++.... +..-..+.+++..|
T Consensus 345 krMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lC 424 (1019)
T KOG0203|consen 345 KRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLC 424 (1019)
T ss_pred HHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999877532110 01112456666666
Q ss_pred ccc---------------cccChHHHHHHHhc----CChHHHhhccceeEeecCCCCCcceEEEEEcC---CCcEEEEEe
Q 002176 370 SRV---------------ENQDAIDAAIVGML----ADPKEARANIQEVHFLPFNPTDKRTALTYIDS---EGKMHRVSK 427 (956)
Q Consensus 370 ~~~---------------~~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~---~g~~~~~~K 427 (956)
++. ..+|+.+.|++++. ++..+.|...+.+.++||||.+|+.-.++... +.+..+..|
T Consensus 425 n~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mK 504 (1019)
T KOG0203|consen 425 NRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMK 504 (1019)
T ss_pred CcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeec
Confidence 542 24578888988764 34467788889999999999999987776643 357788899
Q ss_pred CcHHHHHHhhcC----------chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc-----------cCCCCCceEEEE
Q 002176 428 GAPEQILNLVRN----------KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-----------ESSGGPWQFIGL 486 (956)
Q Consensus 428 Ga~e~il~~~~~----------~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~-----------~~~e~~l~~lGl 486 (956)
||||.++++|+. ++...+.+++...++...|-||++++++.+++++. ...-.+|.|+|+
T Consensus 505 Gape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl 584 (1019)
T KOG0203|consen 505 GAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGL 584 (1019)
T ss_pred CChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccch
Confidence 999999999984 34567788889999999999999999998875531 234567999999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----------------------CCccccCC
Q 002176 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----------------------PSSALLGQ 544 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------------------~~~~l~g~ 544 (956)
+++.||||..+|+++.+||.|||+|+|+||||+.||+++|+++||..+.. ...++.|.
T Consensus 585 ~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~ 664 (1019)
T KOG0203|consen 585 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGS 664 (1019)
T ss_pred hhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecc
Confidence 99999999999999999999999999999999999999999999754211 11235555
Q ss_pred ccccccCcccHHHHhhhcc--eEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccc
Q 002176 545 NKDESIVALPVDELIEKAD--GFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASD 621 (956)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aAD 621 (956)
++. .+...++++++++.. ||||.||+||+.||+.+|++|.+|++||||+||+||||+|||||||| .|+|++|+|||
T Consensus 665 eL~-~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAAD 743 (1019)
T KOG0203|consen 665 ELP-DMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAAD 743 (1019)
T ss_pred ccc-ccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcc
Confidence 554 367778999998876 99999999999999999999999999999999999999999999999 99999999999
Q ss_pred eeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcCCChHHHHHHHHhhccc-ccccccCCC
Q 002176 622 IVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL-IWKFDFPPFMVLIIAILNDGT-IMTISKDRV 699 (956)
Q Consensus 622 ivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~-~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~ 699 (956)
+||+||||++|+..|++||-+|+|+||.+.|.+++|+..+..++++++ ..|+|+.++.+|.|.+.+|.. +++++++..
T Consensus 744 mILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~a 823 (1019)
T KOG0203|consen 744 MILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKA 823 (1019)
T ss_pred eEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCc
Confidence 999999999999999999999999999999999999999888776544 467788999999999999986 588998764
Q ss_pred ------CCCCCCC--ccchHH-HHHHHHHHHHHHHHHHHHH-HHHHHhcCcCCcc----------cCcccCCCCchhhHH
Q 002176 700 ------KPSPLPD--SWKLAE-IFTTGVILGGYLAMMTVIF-FWAAYQTDFFPRT----------FGVSSLHEKDIDDWK 759 (956)
Q Consensus 700 ------~p~~~p~--~~~~~~-~~~~~~~~G~~~~~~~~~~-f~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 759 (956)
++|+.|. ..-..+ +...++.+|+++++..|+. |+.+...+|+|.. -+++++.|++.++|.
T Consensus 824 EsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWt 903 (1019)
T KOG0203|consen 824 ESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWT 903 (1019)
T ss_pred hhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhcccccc
Confidence 3444443 233334 5666788999999998865 4556667777643 234456666655542
Q ss_pred --------HHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--ChhHHHHHHHHHHHHHHHHHHHhcc-ccccccCchhHHH
Q 002176 760 --------KLASAIYLQVSTISQA-LIFVTRARSWSFVD--RPGLLLVLAFAVAQLIATLIAVYAN-WSFAAIEGVGWGW 827 (956)
Q Consensus 760 --------~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 827 (956)
-.+.+.||...+..|+ -++.+.+++-+++. ..|+.+++++++-.++++++.+... ...+.+.|..|.|
T Consensus 904 yeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~ 983 (1019)
T KOG0203|consen 904 YEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQW 983 (1019)
T ss_pred HHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEE
Confidence 1234455555566776 45666666666554 4688888888876666666543322 1234577888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhh
Q 002176 828 AGVVWLYNLIFYIPLDFIKFFIRYALSGKAW 858 (956)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~ 858 (956)
|+..+.++++.++.+|++|++.|.+. ..|
T Consensus 984 wl~a~P~~ilIfvydE~Rk~~IR~~P--~gw 1012 (1019)
T KOG0203|consen 984 WLVAFPFGILIFVYDEVRKLFIRRYP--GGW 1012 (1019)
T ss_pred EEecccceeeeeeHHHHHhHhhhhCC--Cch
Confidence 99999999999999999999999876 445
No 15
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=2.2e-113 Score=1085.77 Aligned_cols=737 Identities=22% Similarity=0.267 Sum_probs=578.9
Q ss_pred CCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHH
Q 002176 34 KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTI 113 (956)
Q Consensus 34 ~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i 113 (956)
.+|||++|+++|+++||+|+++.++++.|..|++++++|+.+++++++++.++- .+|++++.|+++++++..+
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~ 209 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPVPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISL 209 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCCCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999998888888999999999988877765554432 4789999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEe--CCCeeecceEEeecCCceeeccccCCcCee
Q 002176 114 SFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVK--LGDIIPADARLLEGDPLKIDQSALTGESLP 191 (956)
Q Consensus 114 ~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~--~Gd~VPaD~~ll~g~~l~VDeS~LTGES~p 191 (956)
++++++++.++++++. ..+++++|+|||+|++|+++||||||+|.|+ +||+|||||+|++|+ +.||||+|||||.|
T Consensus 210 ~~~~~~k~~~~L~~~~-~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdES~LTGES~P 287 (1054)
T TIGR01657 210 SVYQIRKQMQRLRDMV-HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNESMLTGESVP 287 (1054)
T ss_pred HHHHHHHHHHHHHHhh-cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEecccccCCccc
Confidence 9999999999888864 3567899999999999999999999999999 999999999999997 58999999999999
Q ss_pred eecCCC------------------CccccCCeecc-------CcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHH
Q 002176 192 VTKGPG------------------DSVYSGSTCKQ-------GEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLT 245 (956)
Q Consensus 192 v~K~~g------------------~~v~~Gs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~ 245 (956)
+.|.+. +++|+||.|.+ |.+.++|++||.+|..|++.+++... ...+++++...
T Consensus 288 v~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~ 367 (1054)
T TIGR01657 288 VLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSF 367 (1054)
T ss_pred eecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHH
Confidence 999762 25999999985 78999999999999999999988765 55678888877
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhc
Q 002176 246 AIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMA 325 (956)
Q Consensus 246 ~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg 325 (956)
++..++++..+++.++ .++.....+.++...+..++.+++++||++||++++++++.|++||+|+|++||++.++|++|
T Consensus 368 ~~~~~l~~~a~i~~i~-~~~~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG 446 (1054)
T TIGR01657 368 KFILFLAVLALIGFIY-TIIELIKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAG 446 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecc
Confidence 7765543322222221 122222234567788889999999999999999999999999999999999999999999999
Q ss_pred CceEEeeccccceeeCceeEEeeeeeeccCC----------CCHHHHHHHHHHhccc------cccChHHHHHHHhcCCh
Q 002176 326 GMDVLCSDKTGTLTLNKLSVDKNLIEIFAKG----------VDADAVVLMAARASRV------ENQDAIDAAIVGMLADP 389 (956)
Q Consensus 326 ~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~----------~~~~~~l~~aa~~~~~------~~~~~i~~ai~~~~~~~ 389 (956)
++|++|||||||||+|+|+|.+......... ..........+.|+.. ..+||+|.|++.+.+..
T Consensus 447 ~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~ 526 (1054)
T TIGR01657 447 KIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWT 526 (1054)
T ss_pred eeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCE
Confidence 9999999999999999999988653111000 1112233444445432 23699999999875311
Q ss_pred ----HH--H-------------hhccceeEeecCCCCCcceEEEEEcC-CCcEEEEEeCcHHHHHHhhcCchHHHHHHHH
Q 002176 390 ----KE--A-------------RANIQEVHFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHA 449 (956)
Q Consensus 390 ----~~--~-------------~~~~~~l~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~ 449 (956)
.+ . ...+++++.+||+|++|||+++++.. +++.+.++|||||.|+++|+.. ..++++++
T Consensus 527 ~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~ 605 (1054)
T TIGR01657 527 LEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQE 605 (1054)
T ss_pred EECCCCcccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHH
Confidence 00 0 13577889999999999999998864 3567899999999999999853 35678889
Q ss_pred HHHHHHHcCCeEEEEEEeecCCC--------CccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHH
Q 002176 450 IIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (956)
Q Consensus 450 ~i~~~a~~G~RvlavA~~~l~~~--------~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~t 521 (956)
.+++|+++|+||+|+|||++++. ++++.|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.|
T Consensus 606 ~~~~~a~~G~RVLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~T 685 (1054)
T TIGR01657 606 VLKSYTREGYRVLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLT 685 (1054)
T ss_pred HHHHHHhcCCEEEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHH
Confidence 99999999999999999998642 2356789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC---------------------------------------------------CccccCCcccc--
Q 002176 522 AKETGRRLGMGTNMYP---------------------------------------------------SSALLGQNKDE-- 548 (956)
Q Consensus 522 A~~ia~~lGi~~~~~~---------------------------------------------------~~~l~g~~~~~-- 548 (956)
|.+||++|||..+... ..+++|++.+.
T Consensus 686 A~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~ 765 (1054)
T TIGR01657 686 AVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQ 765 (1054)
T ss_pred HHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHH
Confidence 9999999999643210 01222222211
Q ss_pred ccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC
Q 002176 549 SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (956)
Q Consensus 549 ~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (956)
.+.+.++.+++.+++||||++|+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ ||+ .|||+++.+|+
T Consensus 766 ~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~ 843 (1054)
T TIGR01657 766 AHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLAS 843 (1054)
T ss_pred HhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCc
Confidence 0123457778889999999999999999999999999999999999999999999999999864 555 79999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhccc-ccccccCCCCCC---CC
Q 002176 629 LSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGT-IMTISKDRVKPS---PL 704 (956)
Q Consensus 629 ~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p~---~~ 704 (956)
|++|+.+|++||+++.|+++.+.|.+.+++...+..++. ...+.+++++|++|++++++.+ .++++.+++.+. .+
T Consensus 844 ~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~ 922 (1054)
T TIGR01657 844 ISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSIL-YLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKER 922 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCC
Confidence 999999999999999999999999999888766554433 3456889999999999999987 577777765321 22
Q ss_pred C-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 002176 705 P-DSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRAR 783 (956)
Q Consensus 705 p-~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~ 783 (956)
| .+......+...+.+|++..+..+..|++.....|+....... ..+..... ...+++| .++.+.+...++.++.
T Consensus 923 P~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~T~~f-~~~~~~~~~~~~~~~~ 998 (1054)
T TIGR01657 923 PPSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVD-LEKENFPN--LLNTVLF-FVSSFQYLITAIVNSK 998 (1054)
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCC-cccccCcc--HHHHHHH-HHHHHHHHHheEEEcC
Confidence 3 3333345566666777777777776666655444431111100 10011101 1233444 4555566667777776
Q ss_pred CCccc
Q 002176 784 SWSFV 788 (956)
Q Consensus 784 ~~~~~ 788 (956)
+.+|.
T Consensus 999 g~pf~ 1003 (1054)
T TIGR01657 999 GPPFR 1003 (1054)
T ss_pred Ccchh
Confidence 65553
No 16
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.1e-100 Score=972.96 Aligned_cols=785 Identities=18% Similarity=0.249 Sum_probs=581.1
Q ss_pred cCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 49 FGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNA 124 (956)
Q Consensus 49 ~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~ 124 (956)
|.+|.+...|++.| +.|++||.+|.+++|++.+++++++...... .+....+++++++++.+.+++|+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--~~t~~~pL~~v~~~~~~~~~~ed~~r~~~ 78 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY--RGTSIVPLAFVLIVTAIKEAIEDIRRRRR 78 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--ccHhHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 67899999998876 6889999999999999999999986433221 23334555666668899999999999998
Q ss_pred HHHHhhcCCCcEEEEEC-CeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC----ceeeccccCCcCeeeecCCC--
Q 002176 125 AAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (956)
Q Consensus 125 ~~~l~~~~~~~~~V~Rd-G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~----l~VDeS~LTGES~pv~K~~g-- 197 (956)
.++. ..++++|+|| |++++++|+||+|||+|.|++||+||||++|++++. ++||||+|||||.|+.|.+.
T Consensus 79 d~~~---n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~ 155 (1057)
T TIGR01652 79 DKEV---NNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEE 155 (1057)
T ss_pred HHHH---hCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchh
Confidence 8764 3578999997 899999999999999999999999999999998544 78999999999999998631
Q ss_pred ----------------------------------------------CccccCCeecc-CcEEEEEEEecchhHHHhHHHh
Q 002176 198 ----------------------------------------------DSVYSGSTCKQ-GEIEAVVIATGVHTFFGKAAHL 230 (956)
Q Consensus 198 ----------------------------------------------~~v~~Gs~v~~-G~~~~~V~~tG~~T~~gki~~l 230 (956)
|.+|+||.+++ |.++|+|++||.+|++++...
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~- 234 (1057)
T TIGR01652 156 TQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNAT- 234 (1057)
T ss_pred hhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCC-
Confidence 46899999999 899999999999998866321
Q ss_pred hhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccc----cCcc---------------chHHHHHHHHHhhcCC
Q 002176 231 VDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH----RKYR---------------PGIDNLLVLLIGGIPI 291 (956)
Q Consensus 231 ~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~----~~~~---------------~~~~~~l~llv~~iP~ 291 (956)
....+.+++++.++++..+++++.++.+++..++...... ..|. ..+..++.++..++|+
T Consensus 235 -~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPi 313 (1057)
T TIGR01652 235 -QAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPI 313 (1057)
T ss_pred -CCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcce
Confidence 1235678999999999876554333333332222111111 0111 1456678889999999
Q ss_pred chhHHHHHHHHHHH------HHHHhC----CCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee--ccCCC--
Q 002176 292 AMPTVLSVTMAIGS------HRLSLQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI--FAKGV-- 357 (956)
Q Consensus 292 aLp~~~~v~~~~~~------~~l~~~----~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~~-- 357 (956)
+||+.+++++++++ .+|.++ ++++|+++++|+||++++||+|||||||+|+|+++++.+.. +..+.
T Consensus 314 sL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~ 393 (1057)
T TIGR01652 314 SLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTE 393 (1057)
T ss_pred eeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcch
Confidence 99999999999999 788874 59999999999999999999999999999999999986521 10000
Q ss_pred -----------------------------C----------------HHHHHHHHHHhccc--------------cccChH
Q 002176 358 -----------------------------D----------------ADAVVLMAARASRV--------------ENQDAI 378 (956)
Q Consensus 358 -----------------------------~----------------~~~~l~~aa~~~~~--------------~~~~~i 378 (956)
+ ..+++..++.|+.. ..++|.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~ 473 (1057)
T TIGR01652 394 IKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPD 473 (1057)
T ss_pred HHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCc
Confidence 0 02334455555432 125899
Q ss_pred HHHHHHhcCChH------------------HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC-
Q 002176 379 DAAIVGMLADPK------------------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN- 439 (956)
Q Consensus 379 ~~ai~~~~~~~~------------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~- 439 (956)
|.|++..+...+ .....++.++.+||+|+||||++++++++|+.++++|||||.|+++|..
T Consensus 474 E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~ 553 (1057)
T TIGR01652 474 EAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSG 553 (1057)
T ss_pred HHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhcc
Confidence 999998653211 0123578889999999999999999988888899999999999999985
Q ss_pred chHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCC-------------------------ccCCCCCceEEEEeccCCCCC
Q 002176 440 KSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGR-------------------------KESSGGPWQFIGLMPLFDPPR 494 (956)
Q Consensus 440 ~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~-------------------------~~~~e~~l~~lGli~~~D~lR 494 (956)
.++.++++.+++++|+++|+||+++|||.+++++ .++.|++|+|+|+++++||||
T Consensus 554 ~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq 633 (1057)
T TIGR01652 554 GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQ 633 (1057)
T ss_pred chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhh
Confidence 3456778899999999999999999999987542 134689999999999999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC------------------------------------
Q 002176 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS------------------------------------ 538 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~------------------------------------ 538 (956)
+|++++|+.|++|||+|||+|||+++||.+||++||+.++....
T Consensus 634 ~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 634 EGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred hccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999997543211
Q ss_pred ---ccccCCccccccCc---ccHHHHhhhcc--eEEeeChhhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCeeEEe
Q 002176 539 ---SALLGQNKDESIVA---LPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 539 ---~~l~g~~~~~~~~~---~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
.+++|..++..+++ ..+.+++.+++ ||||++|+||.+||+.+|+. |++|+|||||+||+||||+|||||++
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 13334333321111 12444556665 99999999999999999998 99999999999999999999999998
Q ss_pred c--cccHHHhhccceeecCCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc----CCChHHHHH
Q 002176 610 A--DATDAARSASDIVLTEPGLSVIISAV-LTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKF----DFPPFMVLI 682 (956)
Q Consensus 610 g--~gtd~Ak~aADivL~~~~~~~iv~ai-~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~----~~~p~~~l~ 682 (956)
. +|. .|+.+||+++.+ |+.+..++ .|||++|+|+++++.|.+++|+.+++..+++.++.++ ++.+++++|
T Consensus 794 ~g~eg~-qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~ 870 (1057)
T TIGR01652 794 SGKEGM-QAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVL 870 (1057)
T ss_pred cChHHH-HHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 4 333 466799999975 99999988 7899999999999999999999988888777665433 567788999
Q ss_pred HHHhhccc-ccccc-cCCCC-------CCC-----CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCcc
Q 002176 683 IAILNDGT-IMTIS-KDRVK-------PSP-----LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVS 748 (956)
Q Consensus 683 i~~~~d~~-~~~l~-~d~~~-------p~~-----~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~ 748 (956)
+|++++.+ +++++ +|+.. +|. +.+.....+.|..+++.|++.+++.+++.++.+...... ..|
T Consensus 871 ~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g-- 947 (1057)
T TIGR01652 871 YNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSG-- 947 (1057)
T ss_pred HHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCC--
Confidence 99998876 56775 33331 121 112223345677788899999988776555444321110 011
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHHHHHhc-c---ccccccCchh
Q 002176 749 SLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATLIAVYA-N---WSFAAIEGVG 824 (956)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~ 824 (956)
...++..+.+.+|..+.+..++. +...++.|+|+.....|+.+.+.+.... +...+. . ++........
T Consensus 948 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s 1019 (1057)
T TIGR01652 948 -----SLDDFSSVGVIVFTALVVIVNLK-IALEINRWNWISLITIWGSILVWLIFVI--VYSSIFPSPAFYKAAPRVMGT 1019 (1057)
T ss_pred -----cccchhhHHHHHHHHHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHHHHHHH--HHHhhcccccHHHHHHHHHcc
Confidence 11112245566666655555543 3345566765544333333322211111 011010 0 1111112223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002176 825 WGWAGVVWLYNLIFYIPLDFIKFFIRYALS 854 (956)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~ 854 (956)
+.+|+.+++..++.++|+.++|++.|.+.|
T Consensus 1020 ~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P 1049 (1057)
T TIGR01652 1020 FGFWLVLLVIVLISLLPRFTYKAIQRLFRP 1049 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 556677788888889999999999888886
No 17
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.2e-98 Score=886.73 Aligned_cols=545 Identities=24% Similarity=0.378 Sum_probs=451.2
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCC-cEE
Q 002176 67 GFMWNPLSWVMEAAAIMAIALANGGG--KPPDW--QDFVGIVTLLLINSTISFIE----ENNAGNAAAALMASLAP-KSK 137 (956)
Q Consensus 67 ~~~~~p~~~~l~~aails~~~~~~~~--~~~~~--~~~~~ii~~~li~~~i~~~~----e~~a~~~~~~l~~~~~~-~~~ 137 (956)
.+++||+.|+++++++++++++.... ...+| .+.+.|.++++++.+++.++ |+|+++++++|++..++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 56899999999999999998864210 01122 44666777777777777776 78999999999998886 776
Q ss_pred -EEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC---CccccCCeeccCcEEE
Q 002176 138 -VLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEA 213 (956)
Q Consensus 138 -V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g---~~v~~Gs~v~~G~~~~ 213 (956)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. +||||+|||||.||.|++| +.+|+||.+.+|++++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i 186 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEV 186 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEecchhcCCCCceeccCCCccCeeecCceeecceEEE
Confidence 7899999999999999999999999999999999999986 8999999999999999999 8899999999999999
Q ss_pred EEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-cccCccchHHHHHHHHHhhcCC
Q 002176 214 VVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPI-QHRKYRPGIDNLLVLLIGGIPI 291 (956)
Q Consensus 214 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~iP~ 291 (956)
+|++||.+|++||+.++++++ .+++|+|.....+...+.+ +++..+ +..+.. ...++...+...+++++++|||
T Consensus 187 ~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l~~~---~~~~~~~~~~~~~~~~~~~val~V~~IP~ 262 (673)
T PRK14010 187 EITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFLVVI---LTMYPLAKFLNFNLSIAMLIALAVCLIPT 262 (673)
T ss_pred EEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHHHHH---HHHHHHHhhccHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999887 5788998766554332211 111111 111111 0113334556677888899999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcc
Q 002176 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (956)
Q Consensus 292 aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~ 371 (956)
+||..++++.+.|+.||+|+|+++|+++++|+||++|++|||||||||+|++.+.+.. .. .+.+.++++..++.++.
T Consensus 263 aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~~~ 339 (673)
T PRK14010 263 TIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYESSI 339 (673)
T ss_pred hHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999877665532 22 24455667777766654
Q ss_pred ccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCch-HHHHHHHHH
Q 002176 372 VENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRVHAI 450 (956)
Q Consensus 372 ~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~~~~ 450 (956)
. +.||++.|++.++...... ......+++||++++|+|++.+ +|+ .+.||+|+.++++|.... ..+.++++.
T Consensus 340 ~-s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~ 412 (673)
T PRK14010 340 A-DDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLDAL 412 (673)
T ss_pred C-CCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHHHH
Confidence 3 4589999998875421100 0011235689999999998864 343 456999999999997421 223346667
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002176 451 IDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (956)
Q Consensus 451 i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (956)
+++++++|+|+++++. +++++|+++++||+|||++++|++||++||+++|+||||+.||.++|+++|
T Consensus 413 ~~~~a~~G~~~l~v~~-------------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elG 479 (673)
T PRK14010 413 VKGVSKKGGTPLVVLE-------------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAG 479 (673)
T ss_pred HHHHHhCCCeEEEEEE-------------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcC
Confidence 7889999999999874 348999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002176 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 531 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
|. ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||||
T Consensus 480 I~------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg 529 (673)
T PRK14010 480 VD------------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN 529 (673)
T ss_pred Cc------------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC
Confidence 94 379999999999999999999999999999999999999999999999
Q ss_pred cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 611 DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLAL 669 (956)
Q Consensus 611 ~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~ 669 (956)
+|||+||++||+||+||||++|++++++||++|.|+++++.|.++.|++.++..+...+
T Consensus 530 sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 530 SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998776655433
No 18
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.1e-95 Score=915.20 Aligned_cols=781 Identities=16% Similarity=0.180 Sum_probs=566.8
Q ss_pred hcCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 48 IFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGN 123 (956)
Q Consensus 48 ~~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~ 123 (956)
+|..|.+...|++.| +.+++||..+.++++++.+++++++..... ..+...+++++++++.++.+.++++++++
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~k 163 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRHR 163 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999999876 577899999999999999999988654322 23456677888888899999999999999
Q ss_pred HHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC----ceeeccccCCcCeeeecCCC--
Q 002176 124 AAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKGPG-- 197 (956)
Q Consensus 124 ~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~----l~VDeS~LTGES~pv~K~~g-- 197 (956)
+.++.+ +.+++|+|+|++++++|++|+|||+|.+++||.||||++|++++. ++||||+|||||.|+.|.++
T Consensus 164 ~d~~~N---~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~ 240 (1178)
T PLN03190 164 SDRIEN---NRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQE 240 (1178)
T ss_pred hHHhhc---CcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccch
Confidence 887654 578999999999999999999999999999999999999998332 58999999999999999642
Q ss_pred -------------------------------------------CccccCCeeccCc-EEEEEEEecchhHHHhHHHhhhc
Q 002176 198 -------------------------------------------DSVYSGSTCKQGE-IEAVVIATGVHTFFGKAAHLVDS 233 (956)
Q Consensus 198 -------------------------------------------~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki~~l~~~ 233 (956)
+.+++||.+++.+ ++|+|++||.+|+.. .+....
T Consensus 241 ~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~--~N~~~~ 318 (1178)
T PLN03190 241 TLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM--LNNSGA 318 (1178)
T ss_pred hhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh--hcCCCC
Confidence 3467788888774 999999999999741 122222
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHh--Hhhccc-c-----Cc--------------------cch---HHHHH
Q 002176 234 TNQQGHFQKVLTAIGNFCICSIAVGMIVEIIV--MYPIQH-R-----KY--------------------RPG---IDNLL 282 (956)
Q Consensus 234 ~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~--~~~~~~-~-----~~--------------------~~~---~~~~l 282 (956)
..+.+++++.+|++..+++++.++.+++..+. .|.... . .| ... +...+
T Consensus 319 ~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l 398 (1178)
T PLN03190 319 PSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSV 398 (1178)
T ss_pred CCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHH
Confidence 25789999999998776544333332222222 111100 0 00 011 22234
Q ss_pred HHHHhhcCCchhHHHHHHHHHHHHHHHhCC----------CcccccchhhhhcCceEEeeccccceeeCceeEEeeeeee
Q 002176 283 VLLIGGIPIAMPTVLSVTMAIGSHRLSLQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEI 352 (956)
Q Consensus 283 ~llv~~iP~aLp~~~~v~~~~~~~~l~~~~----------ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~ 352 (956)
+++..+||++|++.++++...++.++.++. +.+|+.+.+|+||+|++||+|||||||+|+|+++++.+..
T Consensus 399 il~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g 478 (1178)
T PLN03190 399 IVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWG 478 (1178)
T ss_pred HHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECC
Confidence 566789999999999999988888887754 8899999999999999999999999999999999987621
Q ss_pred --ccC-----------------C----------------------CC-H-----HHHHHHHHHhccc-------------
Q 002176 353 --FAK-----------------G----------------------VD-A-----DAVVLMAARASRV------------- 372 (956)
Q Consensus 353 --~~~-----------------~----------------------~~-~-----~~~l~~aa~~~~~------------- 372 (956)
+.. + .+ + .+++.+.+.|+..
T Consensus 479 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~ 558 (1178)
T PLN03190 479 VDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTV 558 (1178)
T ss_pred EEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccc
Confidence 100 0 00 0 1245555666532
Q ss_pred -----cccChHHHHHHHhcCCh----------------HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHH
Q 002176 373 -----ENQDAIDAAIVGMLADP----------------KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPE 431 (956)
Q Consensus 373 -----~~~~~i~~ai~~~~~~~----------------~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e 431 (956)
...+|.|.|++..+.+. ...+..++.++.+||+|+||||++++++++|+.++++|||||
T Consensus 559 ~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e 638 (1178)
T PLN03190 559 KLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADT 638 (1178)
T ss_pred cceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcH
Confidence 11368999998875332 123557889999999999999999999888889999999999
Q ss_pred HHHHhhcCc--hHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc-------------------------cCCCCCceEE
Q 002176 432 QILNLVRNK--SEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK-------------------------ESSGGPWQFI 484 (956)
Q Consensus 432 ~il~~~~~~--~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~-------------------------~~~e~~l~~l 484 (956)
.|+++|... ++.++++.+++++|+++|+|||++|||.+++++. +..|++|+++
T Consensus 639 ~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~l 718 (1178)
T PLN03190 639 SMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTIL 718 (1178)
T ss_pred HHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEE
Confidence 999999753 3567788899999999999999999999975321 3468999999
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc-------------------------
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS------------------------- 539 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~------------------------- 539 (956)
|+++++||||++++++|++|+++||+|||+|||+.+||++||++|||.++.....
T Consensus 719 G~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~ 798 (1178)
T PLN03190 719 GASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLT 798 (1178)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhcc
Confidence 9999999999999999999999999999999999999999999999975432111
Q ss_pred ----------------------cccCCccccccC---cccHHHHhhhcc--eEEeeChhhHHHHHHHHhhC-CCEEEEEc
Q 002176 540 ----------------------ALLGQNKDESIV---ALPVDELIEKAD--GFAGVFPEHKYEIVKRLQAR-KHICGMTG 591 (956)
Q Consensus 540 ----------------------~l~g~~~~~~~~---~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~G 591 (956)
+++|..++..++ ...+.++..+++ ||||++|+||++||+.+|++ +++|+|||
T Consensus 799 ~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIG 878 (1178)
T PLN03190 799 TVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIG 878 (1178)
T ss_pred ccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 111211111111 123455666666 79999999999999999997 58999999
Q ss_pred CCccChhhhccCCeeEEec--cccHHHhhccceeecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 592 DGVNDAPALKKADIGIAVA--DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (956)
Q Consensus 592 DGvNDapALk~AdVGIamg--~gtd~Ak~aADivL~~~~~~~iv~ai~-~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~ 668 (956)
||+||+||||+|||||++. +|.+|++ |||+++.+ |..+..++. |||+.|+|+.+.+.|.+++|+.++++.+++.
T Consensus 879 DGaNDv~mIq~AdVGIGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~ 955 (1178)
T PLN03190 879 DGANDVSMIQMADVGVGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYV 955 (1178)
T ss_pred CCcchHHHHHhcCeeeeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999974 6666666 99999966 455555554 9999999999999999999999999999988
Q ss_pred HhhhcCC----ChHHHHHHHH-hhcccccccc-cCCCCCCC------------CCCccchHHHHHHHHHHHHHHHHHHHH
Q 002176 669 LIWKFDF----PPFMVLIIAI-LNDGTIMTIS-KDRVKPSP------------LPDSWKLAEIFTTGVILGGYLAMMTVI 730 (956)
Q Consensus 669 ~~~~~~~----~p~~~l~i~~-~~d~~~~~l~-~d~~~p~~------------~p~~~~~~~~~~~~~~~G~~~~~~~~~ 730 (956)
++.+|.- .++.+.+.|+ ++..+++.++ +|+.-|.. +.+.....+.|+.|++.|++.+++.|+
T Consensus 956 ~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff 1035 (1178)
T PLN03190 956 LFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFF 1035 (1178)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHH
Confidence 8777643 3444444444 4455566664 66653321 112223345788889999999998876
Q ss_pred HHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHH-HHHHHH
Q 002176 731 FFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQ-LIATLI 809 (956)
Q Consensus 731 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~-~~~~~~ 809 (956)
+.++.+..... + +. ....++++.+.++.++ -+...+++|+|.....+|+.+.+.+.. ++...+
T Consensus 1036 ~~~~~~~~~~~----~-----~~------~~~~~~~~~~v~~vnl-~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~ 1099 (1178)
T PLN03190 1036 VPLFAYWASTI----D-----GS------SIGDLWTLAVVILVNL-HLAMDIIRWNWITHAAIWGSIVATFICVIVIDAI 1099 (1178)
T ss_pred HHHHHhcCCCc----C-----ce------eEhHhhhhHHHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65554432111 1 00 1122333333333343 233455667655444443333222211 111111
Q ss_pred HHhcc-ccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 002176 810 AVYAN-WSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSG 855 (956)
Q Consensus 810 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~ 855 (956)
+.... +.+. .....+.+|+.+++..++.++|+.++|++.|.+.|.
T Consensus 1100 ~~~~~~~~~~-~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1100 PTLPGYWAIF-HIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred ccchhHHHHH-HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 10001 1111 111235567777888888899999999999988874
No 19
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=6.3e-94 Score=853.19 Aligned_cols=537 Identities=25% Similarity=0.330 Sum_probs=447.2
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhcCC----CC---CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-cEE
Q 002176 66 LGFMWNPLSWVMEAAAIMAIALANGG----GK---PPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP-KSK 137 (956)
Q Consensus 66 l~~~~~p~~~~l~~aails~~~~~~~----~~---~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~-~~~ 137 (956)
-.||+||+.++++++++++++++... +. ...|...+.+++.+++...++.++|+|+++++++|++..++ +++
T Consensus 28 ~~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~ 107 (679)
T PRK01122 28 RVQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFAR 107 (679)
T ss_pred HHHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEE
Confidence 35789999999999999999886321 11 11233334444445566677789999999999999998775 799
Q ss_pred EEECCe-EEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCc---cccCCeeccCcEEE
Q 002176 138 VLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIEA 213 (956)
Q Consensus 138 V~RdG~-~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~---v~~Gs~v~~G~~~~ 213 (956)
|+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||||+|||||.||.|++|+. +|+||.|.+|++++
T Consensus 108 vir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i 186 (679)
T PRK01122 108 KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVI 186 (679)
T ss_pred EEECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEE
Confidence 999988 9999999999999999999999999999999985 899999999999999999988 99999999999999
Q ss_pred EEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCc
Q 002176 214 VVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIA 292 (956)
Q Consensus 214 ~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~a 292 (956)
+|+++|.+|++||+.++++++ .+++|+|..++.+..++...+++.++...++.++ .+.. ..+..++++++++|||+
T Consensus 187 ~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~a 263 (679)
T PRK01122 187 RITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPTT 263 (679)
T ss_pred EEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccch
Confidence 999999999999999999987 6678999877776554332222222111111111 1222 36777889999999999
Q ss_pred hhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccc
Q 002176 293 MPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRV 372 (956)
Q Consensus 293 Lp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~ 372 (956)
++..++.+...|+.||+|+|+++|++.++|+||++|++|||||||||+|+|++.+.. .. .+.+.++++..++.++..
T Consensus 264 lg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~~ 340 (679)
T PRK01122 264 IGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSLA 340 (679)
T ss_pred hhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999999998753 22 356677777777777665
Q ss_pred cccChHHHHHHHhcCCh---HHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc-hHHHHHHH
Q 002176 373 ENQDAIDAAIVGMLADP---KEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVH 448 (956)
Q Consensus 373 ~~~~~i~~ai~~~~~~~---~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 448 (956)
.+ ||.+.+++.++... ......++..+++||++.++++++.+ +| ..+.||+||.+++.|... ...+++++
T Consensus 341 s~-hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~~ 414 (679)
T PRK01122 341 DE-TPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAELD 414 (679)
T ss_pred CC-CchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHHH
Confidence 44 68999998875431 11111244677899999988777643 34 468999999999999642 23456778
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002176 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (956)
+.+++++++|+|++++|++ ++++|+++++||+|||++++|++||++||+++|+||||+.||.+||++
T Consensus 415 ~~~~~~a~~G~~~l~va~~-------------~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~e 481 (679)
T PRK01122 415 AAVDEVARKGGTPLVVAED-------------NRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE 481 (679)
T ss_pred HHHHHHHhCCCcEEEEEEC-------------CeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 8889999999999999974 489999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 529 LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 529 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+|++ ++|||++||||.++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 482 lGId------------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 482 AGVD------------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred cCCc------------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 3699999999999999999999999999999999999999999999
Q ss_pred eccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITI 658 (956)
Q Consensus 609 mg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni 658 (956)
||+|||+||++||+||+||||++|++++++||++.-.--....|+++.-+
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~ 581 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDV 581 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHH
Confidence 99999999999999999999999999999999998433344666665444
No 20
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-91 Score=808.90 Aligned_cols=651 Identities=23% Similarity=0.336 Sum_probs=498.5
Q ss_pred HHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHH
Q 002176 25 EVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIV 104 (956)
Q Consensus 25 ~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii 104 (956)
+..+......+||+.+++.+|+..||+|.+..+.++.+..++++..||+ +++.+..+.-|... .+++++..|+
T Consensus 149 ~~~~~~~~~~~gL~~~~~~~r~~iyG~N~i~l~ik~i~~iLv~EvL~Pf-YlFQ~fSv~lW~~d------~Y~~YA~cI~ 221 (1140)
T KOG0208|consen 149 RWYSTESYVSNGLERQEIIDRRIIYGRNVISLPIKSISQILVKEVLNPF-YLFQAFSVALWLAD------SYYYYAFCIV 221 (1140)
T ss_pred hhhccceeccCCccHHHHHhHHhhcCCceeeeecccHHHHHHHhccchH-HHHHhHHhhhhhcc------cchhhhhHHH
Confidence 3444455557899999999999999999999999999999999999999 56665555444331 2444455566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeC-CCeeecceEEeecCCceeecc
Q 002176 105 TLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKL-GDIIPADARLLEGDPLKIDQS 183 (956)
Q Consensus 105 ~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~-Gd~VPaD~~ll~g~~l~VDeS 183 (956)
++.+.+...+.+|+++..+.++.+- .....++|+|||.|++|+++|||||||+.+.+ |-..|||++|++|+++ ||||
T Consensus 222 iisv~Si~~sv~e~r~qs~rlr~mv-~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~ci-vNEs 299 (1140)
T KOG0208|consen 222 IISVYSIVLSVYETRKQSIRLRSMV-KFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDCI-VNES 299 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcEE-eecc
Confidence 6667778889999999988887754 34568999999999999999999999999998 9999999999999975 9999
Q ss_pred ccCCcCeeeecCCC-------------------CccccCCeecc------CcEEEEEEEecchhHHHhHHHhhhcccccc
Q 002176 184 ALTGESLPVTKGPG-------------------DSVYSGSTCKQ------GEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238 (956)
Q Consensus 184 ~LTGES~pv~K~~g-------------------~~v~~Gs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~~~~ 238 (956)
+|||||+||.|.+- +.+|+||.+.+ |.+.++|++||.+|..|++.+.+-.+ ++.
T Consensus 300 mLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-kP~ 378 (1140)
T KOG0208|consen 300 MLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-KPV 378 (1140)
T ss_pred cccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC-CCc
Confidence 99999999999873 46999999875 56999999999999999988776544 233
Q ss_pred hHHHHHHHH--HHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCccc
Q 002176 239 HFQKVLTAI--GNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITK 316 (956)
Q Consensus 239 ~l~~~~~~i--~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk 316 (956)
+++-.-+.+ ..++.+ ++++.++..++.+...+.+....+..++.++...+|+|||+++++....+..||.|+||+|.
T Consensus 379 ~fkfyrds~~fi~~l~~-ia~~gfiy~~i~l~~~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCi 457 (1140)
T KOG0208|consen 379 NFKFYRDSFKFILFLVI-IALIGFIYTAIVLNLLGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCI 457 (1140)
T ss_pred ccHHHHHHHHHHHHHHH-HHHHHHHHHhHhHHHcCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEc
Confidence 344333333 222222 22222222233334456778888999999999999999999999999999999999999999
Q ss_pred ccchhhhhcCceEEeeccccceeeCceeEEeeeeeecc---C--------------------C-CCH-HHHHHHHHHhcc
Q 002176 317 RMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFA---K--------------------G-VDA-DAVVLMAARASR 371 (956)
Q Consensus 317 ~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~---~--------------------~-~~~-~~~l~~aa~~~~ 371 (956)
+++.+...|++|++|||||||||++.+.+-.+.....+ . + ..+ ..+....+.|+.
T Consensus 458 sP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHS 537 (1140)
T KOG0208|consen 458 SPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHS 537 (1140)
T ss_pred CccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhce
Confidence 99999999999999999999999999998654321000 0 0 001 122333334432
Q ss_pred c------cccChHHHHHHHhcC------------------------ChHH--------H-hhccceeEeecCCCCCcceE
Q 002176 372 V------ENQDAIDAAIVGMLA------------------------DPKE--------A-RANIQEVHFLPFNPTDKRTA 412 (956)
Q Consensus 372 ~------~~~~~i~~ai~~~~~------------------------~~~~--------~-~~~~~~l~~~pF~s~~kr~s 412 (956)
. -.+||+|..+.+..+ +|.+ . ...+.+++.+||+|.-+|||
T Consensus 538 L~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMS 617 (1140)
T KOG0208|consen 538 LTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMS 617 (1140)
T ss_pred eEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEE
Confidence 2 135777655543211 0100 0 11467889999999999999
Q ss_pred EEEEcC-CCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCC--------CccCCCCCceE
Q 002176 413 LTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDG--------RKESSGGPWQF 483 (956)
Q Consensus 413 v~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~--------~~~~~e~~l~~ 483 (956)
|++.++ +.+.+.|+|||||.|.+.|+. +.+++++++.++.|+.+|+|++|+|+|+++.. .++..|++|+|
T Consensus 618 VIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~F 696 (1140)
T KOG0208|consen 618 VIVSTGGEDKMMVFTKGAPESIAEICKP-ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEF 696 (1140)
T ss_pred EEEecCCCCceEeeccCCHHHHHHhcCc-ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhcccee
Confidence 999864 567899999999999999986 46788999999999999999999999999766 36788999999
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCcc-----------------------
Q 002176 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA----------------------- 540 (956)
Q Consensus 484 lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~----------------------- 540 (956)
+|++.|++++|++++.+|++|++|+||++|+||||..||..+||+|||.........
T Consensus 697 lGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~ 776 (1140)
T KOG0208|consen 697 LGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQT 776 (1140)
T ss_pred eEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCcc
Confidence 999999999999999999999999999999999999999999999999653210000
Q ss_pred -ccC-Ccccc-------------------cc-----------CcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEE
Q 002176 541 -LLG-QNKDE-------------------SI-----------VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICG 588 (956)
Q Consensus 541 -l~g-~~~~~-------------------~~-----------~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~ 588 (956)
..+ .+.+. .+ ..+.+++++.+.+|||||+|+||.++|+.||+.|+.|+
T Consensus 777 ~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~Vg 856 (1140)
T KOG0208|consen 777 QFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVG 856 (1140)
T ss_pred ccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEE
Confidence 000 00000 00 11225667888999999999999999999999999999
Q ss_pred EEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 589 MTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA 668 (956)
Q Consensus 589 m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~ 668 (956)
|||||+|||.|||+|||||+++++. |.-||.+.---++.+++++.|++||+.+----....|...+.+...++.+++
T Consensus 857 fCGDGANDCgALKaAdvGISLSeaE--ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~L- 933 (1140)
T KOG0208|consen 857 FCGDGANDCGALKAADVGISLSEAE--ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFL- 933 (1140)
T ss_pred ecCCCcchhhhhhhcccCcchhhhh--HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhee-
Confidence 9999999999999999999998654 3447888887789999999999999986554444455444433322222211
Q ss_pred HhhhcCCChHHHHHHHHhhccc
Q 002176 669 LIWKFDFPPFMVLIIAILNDGT 690 (956)
Q Consensus 669 ~~~~~~~~p~~~l~i~~~~d~~ 690 (956)
..-+..+..+|.+++.++-..+
T Consensus 934 Y~~~~nl~D~Qfl~iDLlii~p 955 (1140)
T KOG0208|consen 934 YLINSNLGDLQFLFIDLLIITP 955 (1140)
T ss_pred eeecccccchhhhhhHHHHHHH
Confidence 1124567788888888776544
No 21
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.3e-89 Score=812.14 Aligned_cols=542 Identities=24% Similarity=0.318 Sum_probs=450.7
Q ss_pred HHHHhhHHHHHHHHHHHHHHHhcC---CC---CCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-E
Q 002176 67 GFMWNPLSWVMEAAAIMAIALANG---GG---KPPDWQDF---VGIVTLLLINSTISFIEENNAGNAAAALMASLAPK-S 136 (956)
Q Consensus 67 ~~~~~p~~~~l~~aails~~~~~~---~~---~~~~~~~~---~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~-~ 136 (956)
.||.||+.++++++++++++++.. .+ ....|++. +.+++.+++...++.++|+|+++++++|++..+++ +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999998541 11 11246654 33334456777888899999999999999888774 8
Q ss_pred EEEE-CCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCc---cccCCeeccCcEE
Q 002176 137 KVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDS---VYSGSTCKQGEIE 212 (956)
Q Consensus 137 ~V~R-dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~---v~~Gs~v~~G~~~ 212 (956)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.||.|++|+. +|+||.+.+|++.
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~ 186 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLV 186 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEE
Confidence 8885 999999999999999999999999999999999997 5899999999999999999974 9999999999999
Q ss_pred EEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCC
Q 002176 213 AVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPI 291 (956)
Q Consensus 213 ~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 291 (956)
++|+++|.+|++||+.++++++ .+++|+|..++.+..++.+.+.+.++. +..+..+. .....+..++++++++|||
T Consensus 187 i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~aiP~ 263 (675)
T TIGR01497 187 VECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLIPT 263 (675)
T ss_pred EEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhCch
Confidence 9999999999999999999887 567999988777665533222211111 11111111 1123466678899999999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcc
Q 002176 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (956)
Q Consensus 292 aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~ 371 (956)
+++...+.+...|+.||+|+|+++|++.++|+||++|++|||||||||+|+|++.+.. +. .+.+.++++..++.++.
T Consensus 264 aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~~~ 340 (675)
T TIGR01497 264 TIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLASL 340 (675)
T ss_pred hhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHhcC
Confidence 9888777777789999999999999999999999999999999999999999998754 22 35667778888777765
Q ss_pred ccccChHHHHHHHhcCChHH--HhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCc-hHHHHHHH
Q 002176 372 VENQDAIDAAIVGMLADPKE--ARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNK-SEIERRVH 448 (956)
Q Consensus 372 ~~~~~~i~~ai~~~~~~~~~--~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~-~~~~~~~~ 448 (956)
. .+||.+.+++.++.+... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|... ...+.+++
T Consensus 341 ~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~ 415 (675)
T TIGR01497 341 A-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTDLD 415 (675)
T ss_pred C-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHHHH
Confidence 5 457999999877542111 0112334678999999877765433 45 468899999999888532 22345677
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 002176 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR 528 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~ 528 (956)
+.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||..+|.++|++
T Consensus 416 ~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~ 482 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE 482 (675)
T ss_pred HHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Confidence 88899999999999999753 89999999999999999999999999999999999999999999999
Q ss_pred hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 529 LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 529 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+|+. ++|||++||||.++|+.+|++|+.|+|+|||+||+|||++||||||
T Consensus 483 lGI~------------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiA 532 (675)
T TIGR01497 483 AGVD------------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVA 532 (675)
T ss_pred cCCC------------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 9994 3699999999999999999999999999999999999999999999
Q ss_pred eccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 609 VADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (956)
Q Consensus 609 mg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~ 663 (956)
|++|+|+|+++||++++||||++|++++++||+++-+....+.|+++..++-.+.
T Consensus 533 m~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~ 587 (675)
T TIGR01497 533 MNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFA 587 (675)
T ss_pred eCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHH
Confidence 9999999999999999999999999999999999999999999998877765443
No 22
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.7e-86 Score=782.74 Aligned_cols=504 Identities=28% Similarity=0.410 Sum_probs=431.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEE-CCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecC
Q 002176 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLR-DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD 176 (956)
Q Consensus 98 ~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~R-dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~ 176 (956)
.+.+.+++++++.-.++.+-..|+.+++++|+++.|+++++++ ||++++||.++|+|||+|.++|||+||+||++++|+
T Consensus 175 ~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~ 254 (713)
T COG2217 175 EEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGS 254 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCc
Confidence 5666777777788788888888889999999999999997777 566999999999999999999999999999999999
Q ss_pred CceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHH
Q 002176 177 PLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSI 255 (956)
Q Consensus 177 ~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i 255 (956)
+ .||||+|||||.||.|.+||.||+||.+.+|..+..|+++|.+|.+++|.++++++ .+++|.|+..++++.++...+
T Consensus 255 s-~vDeS~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~v 333 (713)
T COG2217 255 S-SVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVV 333 (713)
T ss_pred E-EeecchhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHH
Confidence 8 79999999999999999999999999999999999999999999999999999998 788999999999998877644
Q ss_pred HHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccc
Q 002176 256 AVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKT 335 (956)
Q Consensus 256 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKT 335 (956)
++..++.+++++.....+|..++..++++|+.+|||+|.+++|+++..|..+.+++|+++|+..++|.++++|+++||||
T Consensus 334 l~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKT 413 (713)
T COG2217 334 LVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKT 413 (713)
T ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCC
Confidence 44444444433333335788899999999999999999999999999999999999999999999999999999999999
Q ss_pred cceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEE
Q 002176 336 GTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTY 415 (956)
Q Consensus 336 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~ 415 (956)
||||+|+++|.++. ... + ++++++.+++..+... +||+..||+.++.+.. ....+..+.+| ...-.+
T Consensus 414 GTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~---G~Gv~~--- 480 (713)
T COG2217 414 GTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIP---GRGVEA--- 480 (713)
T ss_pred CCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeec---cCcEEE---
Confidence 99999999998854 332 3 7788888888776554 5799999998654321 11112222333 111111
Q ss_pred EcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCc
Q 002176 416 IDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRH 495 (956)
Q Consensus 416 ~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~ 495 (956)
..+|+ .+..|+++.+.+.-.. ... ..+..+.+.++|..++.++... +++|+++++|++||
T Consensus 481 -~v~g~--~v~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D~~R~ 540 (713)
T COG2217 481 -EVDGE--RVLVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRP 540 (713)
T ss_pred -EECCE--EEEEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeCCCCh
Confidence 12564 4456999887653211 111 4556778889999999999865 89999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHH
Q 002176 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYE 575 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~ 575 (956)
|++++|++||+.|+++.|+||||..+|.++|+++||. +++|.+.||||.+
T Consensus 541 ~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId------------------------------~v~AellPedK~~ 590 (713)
T COG2217 541 DAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID------------------------------EVRAELLPEDKAE 590 (713)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH------------------------------hheccCCcHHHHH
Confidence 9999999999999999999999999999999999994 4699999999999
Q ss_pred HHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 576 IVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655 (956)
Q Consensus 576 iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~ 655 (956)
+|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+|+.|++.
T Consensus 591 ~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~ 670 (713)
T COG2217 591 IVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFG 670 (713)
T ss_pred HHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002176 656 ITIRIVLGFM 665 (956)
Q Consensus 656 ~ni~~vl~~~ 665 (956)
+|...+....
T Consensus 671 yn~~~iplA~ 680 (713)
T COG2217 671 YNAIAIPLAA 680 (713)
T ss_pred HHHHHHHHHH
Confidence 9987655433
No 23
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.8e-80 Score=758.76 Aligned_cols=499 Identities=26% Similarity=0.361 Sum_probs=433.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeec
Q 002176 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (956)
Q Consensus 96 ~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g 175 (956)
.|.+++.++++++++..++.++++|+++.+++|+++.+++++|+|||++++|++++|+|||+|.+++||+|||||+|++|
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g 284 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSP 284 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEEC
Confidence 67888888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHH
Q 002176 176 DPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (956)
Q Consensus 176 ~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 254 (956)
+. .||||+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ .+++|+|+.+++++.++...
T Consensus 285 ~~-~vdes~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~ 363 (741)
T PRK11033 285 FA-SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPA 363 (741)
T ss_pred cE-EeecccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHH
Confidence 86 89999999999999999999999999999999999999999999999999999887 66899999999999887655
Q ss_pred HHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeecc
Q 002176 255 IAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (956)
Q Consensus 255 i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DK 334 (956)
+++..++.+++++...+.+|..++...+++++++|||+|.++.|+++..+..+++|+|+++|+..++|+|+++|++||||
T Consensus 364 v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 364 IMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 44444433333333445567778899999999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEE
Q 002176 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALT 414 (956)
Q Consensus 335 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 414 (956)
|||||+|+|+|.+.. .+ .+.++++++.+++..+. ...||++.|+++++.+. +. .+||.++.+.+.-.
T Consensus 444 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~-----~~----~~~~~~~~~~~~g~ 510 (741)
T PRK11033 444 TGTLTEGKPQVTDIH--PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR-----GL----AIPEAESQRALAGS 510 (741)
T ss_pred CCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-----CC----CCCCCcceEEEeeE
Confidence 999999999998754 22 24667777777765543 45689999998875321 11 24666665554321
Q ss_pred -EE-cCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCC
Q 002176 415 -YI-DSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDP 492 (956)
Q Consensus 415 -~~-~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~ 492 (956)
+. ..+|+.+. .|+|+.+.+. .+.+.+.++++..+|+|++++|++. +++|+++++|+
T Consensus 511 Gv~~~~~g~~~~--ig~~~~~~~~-------~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~i~l~d~ 568 (741)
T PRK11033 511 GIEGQVNGERVL--ICAPGKLPPL-------ADAFAGQINELESAGKTVVLVLRND-------------DVLGLIALQDT 568 (741)
T ss_pred EEEEEECCEEEE--Eecchhhhhc-------cHHHHHHHHHHHhCCCEEEEEEECC-------------EEEEEEEEecC
Confidence 21 23565443 5899887541 1234455678899999999999854 89999999999
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 572 (956)
+|||++++|++|++.|++++|+|||+..+|.++|+++||. .+++++|+|
T Consensus 569 ~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~ 617 (741)
T PRK11033 569 LRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------------------------FRAGLLPED 617 (741)
T ss_pred CchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-------------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999983 257789999
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 002176 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIY 652 (956)
Q Consensus 573 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~ 652 (956)
|.++|+.||+. +.|+|+|||+||+|||++|||||+||+|+|+++++||++++++++..++.++++||++++||++|+.|
T Consensus 618 K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~ 696 (741)
T PRK11033 618 KVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITI 696 (741)
T ss_pred HHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999965 68999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH
Q 002176 653 AVSITIRIVL 662 (956)
Q Consensus 653 ~~~~ni~~vl 662 (956)
++.+|+..+.
T Consensus 697 a~~~n~~~i~ 706 (741)
T PRK11033 697 ALGLKAIFLV 706 (741)
T ss_pred HHHHHHHHHH
Confidence 9999975443
No 24
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-83 Score=781.35 Aligned_cols=798 Identities=17% Similarity=0.208 Sum_probs=583.6
Q ss_pred HHHhcCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 002176 45 RLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120 (956)
Q Consensus 45 r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~ 120 (956)
+...|-.|.+...|++.+ +.+++||.++.+.++++.+++++++ .. +...|...+++++++.++++.+.+|+++
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~r 104 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYR 104 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhh
Confidence 455999999999998865 5789999999999999999999987 32 3346777788888899999999999999
Q ss_pred HHHHHHHHhhcCCCcEEEEECCe-EEEEeccCcCCCcEEEEeCCCeeecceEEeecCC----ceeeccccCCcCeeeecC
Q 002176 121 AGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARLLEGDP----LKIDQSALTGESLPVTKG 195 (956)
Q Consensus 121 a~~~~~~l~~~~~~~~~V~RdG~-~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~----l~VDeS~LTGES~pv~K~ 195 (956)
+++.....+ ..++.|.|++. +++..|++|++||+|.+..++.+|||.+|++++. |+|++++|+||++.+.|.
T Consensus 105 R~~~D~~iN---~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~ 181 (1151)
T KOG0206|consen 105 RHKQDKEVN---NRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQ 181 (1151)
T ss_pred hhhccHHhh---cceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceee
Confidence 999887654 46889999644 8999999999999999999999999999997652 689999999999988774
Q ss_pred C-----------------------------------------------CCccccCCeeccCc-EEEEEEEecchhHHHhH
Q 002176 196 P-----------------------------------------------GDSVYSGSTCKQGE-IEAVVIATGVHTFFGKA 227 (956)
Q Consensus 196 ~-----------------------------------------------g~~v~~Gs~v~~G~-~~~~V~~tG~~T~~gki 227 (956)
. .+++++|+++++++ ++++|+.||.+|++++-
T Consensus 182 ~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n 261 (1151)
T KOG0206|consen 182 ALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQN 261 (1151)
T ss_pred ehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHh
Confidence 3 13578899999987 89999999999987553
Q ss_pred HHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccc---c----------C-----ccchHHHHHHHHHhhc
Q 002176 228 AHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQH---R----------K-----YRPGIDNLLVLLIGGI 289 (956)
Q Consensus 228 ~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~---~----------~-----~~~~~~~~l~llv~~i 289 (956)
... ...+++.+++.++.....+++.++..+++..+....... . + ....+..+++++...+
T Consensus 262 ~~~--~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~li 339 (1151)
T KOG0206|consen 262 SGK--PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLI 339 (1151)
T ss_pred cCC--CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceE
Confidence 322 336778889998887655444333332222222111100 0 0 0112345567788899
Q ss_pred CCchhHHHHHHHHHHHHHHH----------hCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCC-
Q 002176 290 PIAMPTVLSVTMAIGSHRLS----------LQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD- 358 (956)
Q Consensus 290 P~aLp~~~~v~~~~~~~~l~----------~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~- 358 (956)
|++|++.+.+...+++..+. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.|.....+..
T Consensus 340 PISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~ 419 (1151)
T KOG0206|consen 340 PISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNV 419 (1151)
T ss_pred EEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCC
Confidence 99999999999998885443 2578999999999999999999999999999999999987642221110
Q ss_pred -------------------------------------------HHHHHHHHHHhccc-------------cccChHHHHH
Q 002176 359 -------------------------------------------ADAVVLMAARASRV-------------ENQDAIDAAI 382 (956)
Q Consensus 359 -------------------------------------------~~~~l~~aa~~~~~-------------~~~~~i~~ai 382 (956)
.....+..+.|+.. +.+.|.+.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~Al 499 (1151)
T KOG0206|consen 420 TEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAAL 499 (1151)
T ss_pred ChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHH
Confidence 01223344444321 1236778888
Q ss_pred HHhcCChH----------------HHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhc-CchHHHH
Q 002176 383 VGMLADPK----------------EARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVR-NKSEIER 445 (956)
Q Consensus 383 ~~~~~~~~----------------~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~-~~~~~~~ 445 (956)
+..+++.+ .....|+.++.+||+|.||||||++++++|+..++||||+.+|.+++. +.....+
T Consensus 500 V~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e 579 (1151)
T KOG0206|consen 500 VEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLRE 579 (1151)
T ss_pred HHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHH
Confidence 87653211 013578999999999999999999999999999999999999999998 5556788
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCC-------------------------ccCCCCCceEEEEeccCCCCCccHHHH
Q 002176 446 RVHAIIDKFAERGLRSLAVAYQEVPDGR-------------------------KESSGGPWQFIGLMPLFDPPRHDSAET 500 (956)
Q Consensus 446 ~~~~~i~~~a~~G~RvlavA~~~l~~~~-------------------------~~~~e~~l~~lGli~~~D~lR~~~~~a 500 (956)
+..+++++||.+|+|+|++|||++++++ .+.+|++|+++|.+++||+++++++++
T Consensus 580 ~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPet 659 (1151)
T KOG0206|consen 580 KTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPET 659 (1151)
T ss_pred HHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHH
Confidence 8889999999999999999999998664 235799999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc---------------------------------------
Q 002176 501 IRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL--------------------------------------- 541 (956)
Q Consensus 501 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l--------------------------------------- 541 (956)
|+.|++||||+||+|||+.+||.+||..|++..+......+
T Consensus 660 I~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 739 (1151)
T KOG0206|consen 660 IAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEK 739 (1151)
T ss_pred HHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcC
Confidence 99999999999999999999999999999997653321111
Q ss_pred ------cCCccccccCcc---cHHHHhh--hcceEEeeChhhHHHHHHHHhh-CCCEEEEEcCCccChhhhccCCeeEEe
Q 002176 542 ------LGQNKDESIVAL---PVDELIE--KADGFAGVFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 542 ------~g~~~~~~~~~~---~~~~~~~--~~~vfar~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
+|+.+...++.. .+-++.. +..+|||++|.||+.+|+..++ .+.+++++|||+||++|+++|||||++
T Consensus 740 ~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGI 819 (1151)
T KOG0206|consen 740 PFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGI 819 (1151)
T ss_pred CceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeee
Confidence 111111101111 1112222 2348999999999999999974 488999999999999999999999999
Q ss_pred c--cccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCh----HHHHHH
Q 002176 610 A--DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPP----FMVLII 683 (956)
Q Consensus 610 g--~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p----~~~l~i 683 (956)
+ +|.+|+. +||+.+.+..|.....+| |||+.|.|+.+++.|.+++|+.++++.+++.++.+|...+ +.+.+.
T Consensus 820 sG~EGmQAvm-sSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~ly 897 (1151)
T KOG0206|consen 820 SGQEGMQAVM-SSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLY 897 (1151)
T ss_pred ccchhhhhhh-cccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEE
Confidence 6 6777776 999999998888777666 9999999999999999999999999999998888775544 344444
Q ss_pred HHh-hcccccccc-cCCCCCC------C------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCcccCccc
Q 002176 684 AIL-NDGTIMTIS-KDRVKPS------P------LPDSWKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPRTFGVSS 749 (956)
Q Consensus 684 ~~~-~d~~~~~l~-~d~~~p~------~------~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 749 (956)
|++ +..+++.++ +|+..+. | ..+.....+.|+.+++.|++.+++.|++++..+... .....|.
T Consensus 898 Nv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~-~~~~~G~-- 974 (1151)
T KOG0206|consen 898 NVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQ-AVTSNGL-- 974 (1151)
T ss_pred eEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheee-eeccCCC--
Confidence 443 444566665 4443221 1 112233456788899999999999988777766432 1111111
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHHHHHHHHHHH--HHHhc----cccccccCch
Q 002176 750 LHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAFAVAQLIATL--IAVYA----NWSFAAIEGV 823 (956)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~ 823 (956)
.. ++..+.++++..+++..+.. ...-+++|.|+++-.+|+.+++.+......- .+... ..++......
T Consensus 975 ----~~-d~~~~G~~~~T~~Vivv~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~ 1048 (1151)
T KOG0206|consen 975 ----TA-DYWTLGTTVFTIIVIVVNLK-IALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLS 1048 (1151)
T ss_pred ----cC-ChhhccceEEEEEEEEEEee-eeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhc
Confidence 11 12233344333322222221 2223456766655555554444432211110 00000 0222233344
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhHH
Q 002176 824 GWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKAWDLV 861 (956)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~~~~~ 861 (956)
...+|+++++..+++++|+.++|.+.+.++|...+...
T Consensus 1049 ~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~ 1086 (1151)
T KOG0206|consen 1049 SPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQ 1086 (1151)
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHH
Confidence 55688899999999999999999999999987665543
No 25
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-81 Score=722.74 Aligned_cols=541 Identities=24% Similarity=0.344 Sum_probs=446.4
Q ss_pred CChhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCe-EEEEeccCcCCCcEEEEeCCCeeecceEE
Q 002176 95 PDWQDFVG-IVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGK-WMEEDAAILVPGDIISVKLGDIIPADARL 172 (956)
Q Consensus 95 ~~~~~~~~-ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~-~~~I~~~~LvpGDiV~l~~Gd~VPaD~~l 172 (956)
..+.|... ++.++.+...++.....++..++..|+++.|.++.++.+|+ +++||.+.|++||+|.++||++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 44444433 33455566666666667777888999999999999999996 89999999999999999999999999999
Q ss_pred eecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHH
Q 002176 173 LEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFC 251 (956)
Q Consensus 173 l~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~ 251 (956)
++|++ +||||.+|||++||.|++|+.|.+||.+.+|.....++++|.||.+++|.++++++ ..++|+|+.+|+++.++
T Consensus 418 v~Gss-~VDEs~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yF 496 (951)
T KOG0207|consen 418 VDGSS-EVDESLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYF 496 (951)
T ss_pred EeCce-eechhhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcC
Confidence 99998 89999999999999999999999999999999999999999999999999999998 67899999999999886
Q ss_pred HHHHHHHHHHHHHhHhhccc----------cCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchh
Q 002176 252 ICSIAVGMIVEIIVMYPIQH----------RKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAI 321 (956)
Q Consensus 252 ~~~i~i~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~l 321 (956)
...+++..++.++++..+.. ..+..++..++++++.+|||+|.++.|++...|....+++|+++|..+++
T Consensus 497 vP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~L 576 (951)
T KOG0207|consen 497 VPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEAL 576 (951)
T ss_pred CchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHH
Confidence 54443333332222222211 23445677788899999999999999999999999999999999999999
Q ss_pred hhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEe
Q 002176 322 EEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHF 401 (956)
Q Consensus 322 E~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~ 401 (956)
|.+.++++++||||||||+|+++|.+.. ......+..+++.+++.. +....||+..|++.++.+..........+++
T Consensus 577 E~~hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~-Es~SeHPig~AIv~yak~~~~~~~~~~~~~~ 653 (951)
T KOG0207|consen 577 EKAHKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAM-ESGSEHPIGKAIVDYAKEKLVEPNPEGVLSF 653 (951)
T ss_pred HHHhcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHH-hcCCcCchHHHHHHHHHhcccccCcccccee
Confidence 9999999999999999999999998854 444335566666555443 3445689999999997653311111112222
Q ss_pred ecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCc
Q 002176 402 LPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPW 481 (956)
Q Consensus 402 ~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l 481 (956)
..|..+.+...+. .+|+. ++-|.-+.+...-. ...++++..+++....|..+.+++...
T Consensus 654 ~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~------------- 712 (951)
T KOG0207|consen 654 EYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG------------- 712 (951)
T ss_pred ecccCCCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-------------
Confidence 2333333221111 23443 56798888765322 223456777788889999999999976
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhh
Q 002176 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
+++|++.++|++|||+..+|+.||+.||++.|+||||..+|.++|+++|+.
T Consensus 713 ~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------------------- 763 (951)
T KOG0207|consen 713 QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------------------- 763 (951)
T ss_pred EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------------------
Confidence 999999999999999999999999999999999999999999999999963
Q ss_pred cceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHH
Q 002176 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRA 641 (956)
Q Consensus 562 ~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~ 641 (956)
+|||.+.|+||.++|+.+|++|+.|+|+|||+||+|||.+|||||+||.|+|+|.++|||||+.+++..++.+|..+|+
T Consensus 764 -~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSrk 842 (951)
T KOG0207|consen 764 -NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSRK 842 (951)
T ss_pred -eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCChHHHHHHHHhhccc
Q 002176 642 IFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGT 690 (956)
Q Consensus 642 ~~~~i~~~i~~~~~~ni~~vl~~~~~~~~~~~~~~p~~~l~i~~~~d~~ 690 (956)
+++|+|.|+.|++.+|+..+....+.++.|++.++|++--....++...
T Consensus 843 t~~rIk~N~~~A~~yn~~~IpIAagvF~P~~~~L~Pw~A~lama~SSvs 891 (951)
T KOG0207|consen 843 TVKRIKLNFVWALIYNLVGIPIAAGVFAPFGIVLPPWMASLAMAASSVS 891 (951)
T ss_pred HHhhHHHHHHHHHHHHHhhhhhheecccCCccccCchHHHHHHHhhhHH
Confidence 9999999999999999988777777777777888898776666666554
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.1e-78 Score=716.95 Aligned_cols=474 Identities=36% Similarity=0.544 Sum_probs=413.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceee
Q 002176 104 VTLLLINSTISFIEENNAGNAAAALMA--SLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKID 181 (956)
Q Consensus 104 i~~~li~~~i~~~~e~~a~~~~~~l~~--~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VD 181 (956)
+++++++..++.+++++++++.+.|++ ..+++++|+||| +++|++++|+|||+|.+++||+|||||+|++|++ .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 346677889999999999999999998 778899999999 9999999999999999999999999999999975 799
Q ss_pred ccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHH-HHHHHHHHHHH
Q 002176 182 QSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIG-NFCICSIAVGM 259 (956)
Q Consensus 182 eS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~-~~~~~~i~i~~ 259 (956)
||+|||||.|+.|.+||.+|+||.+.+|+.++.|+.+|.+|..+++..++.+. ..++++++..+++. .+++..+++..
T Consensus 81 es~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la 160 (499)
T TIGR01494 81 ESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIA 160 (499)
T ss_pred cccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877 44788899999987 44433332222
Q ss_pred HHHHHhHhhcccc--CccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccc
Q 002176 260 IVEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGT 337 (956)
Q Consensus 260 ~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGT 337 (956)
++.+++++..... +|...+..++++++.+|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGT 240 (499)
T TIGR01494 161 LAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGT 240 (499)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCc
Confidence 2222221111112 36678899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEEEEc
Q 002176 338 LTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALTYID 417 (956)
Q Consensus 338 LT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~~~~ 417 (956)
||+|+|+|.++.. .. + .....||++.|++.++.. +.++..||++..+++++++..
T Consensus 241 LT~~~~~v~~~~~--~~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~~~ 295 (499)
T TIGR01494 241 LTKNEMSFKKVSV--LG-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIVRG 295 (499)
T ss_pred cccCceEEEEEEe--cC-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEEec
Confidence 9999999988652 11 0 123568999999887642 123568999999999888765
Q ss_pred CCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccH
Q 002176 418 SEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDS 497 (956)
Q Consensus 418 ~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~ 497 (956)
.++ .++||+|+.+.+.|.. +.+.+++++++|+|++++|++. +++|++.++|++|+|+
T Consensus 296 ~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~~~ 352 (499)
T TIGR01494 296 PDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRDDA 352 (499)
T ss_pred CCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCchhH
Confidence 333 4789999999998752 2334556888999999999876 8999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHH
Q 002176 498 AETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIV 577 (956)
Q Consensus 498 ~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV 577 (956)
+++|+.|+++|++++|+|||++.+|..+|+++|+ +++++|+||.++|
T Consensus 353 ~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi---------------------------------~~~~~p~~K~~~v 399 (499)
T TIGR01494 353 KETISELREAGIRVIMLTGDNVLTAKAIAKELGI---------------------------------FARVTPEEKAALV 399 (499)
T ss_pred HHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc---------------------------------eeccCHHHHHHHH
Confidence 9999999999999999999999999999999986 5889999999999
Q ss_pred HHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 578 KRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 657 (956)
Q Consensus 578 ~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~n 657 (956)
+.+|+.|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++.+||++++++++++.|.+++|
T Consensus 400 ~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n 474 (499)
T TIGR01494 400 EALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYN 474 (499)
T ss_pred HHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 788999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q 002176 658 IRIVLGFM 665 (956)
Q Consensus 658 i~~vl~~~ 665 (956)
+..++..+
T Consensus 475 ~~~~~~a~ 482 (499)
T TIGR01494 475 LILIPLAA 482 (499)
T ss_pred HHHHHHHH
Confidence 88655444
No 27
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=8.4e-77 Score=705.75 Aligned_cols=498 Identities=29% Similarity=0.415 Sum_probs=423.3
Q ss_pred HHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCC
Q 002176 76 VMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPG 155 (956)
Q Consensus 76 ~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpG 155 (956)
.+.++++++++.+ +|.++..|+++++++..+++++++|+.+.+++|++..+++++|+|||+++++++++|+||
T Consensus 4 l~~~a~~~~~~~~-------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~G 76 (536)
T TIGR01512 4 LMALAALGAVAIG-------EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVG 76 (536)
T ss_pred HHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCC
Confidence 3456677777763 799999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002176 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 156 DiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
|+|.+++||+|||||++++|+. .||||+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.+++++.
T Consensus 77 Div~v~~G~~iP~Dg~ii~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~ 155 (536)
T TIGR01512 77 DVVVVKPGERVPVDGVVLSGTS-TVDESALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQ 155 (536)
T ss_pred CEEEEcCCCEeecceEEEeCcE-EEEecccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHh
Confidence 9999999999999999999986 79999999999999999999999999999999999999999999999999999876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002176 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++++|+.+++++.++...+++..++.+++.+... .+..++..++++++++|||+||+++++++..+..+++++|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gil 233 (536)
T TIGR01512 156 SRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGIL 233 (536)
T ss_pred hCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeE
Confidence 578899999999988765544443333333333222 223377788999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhh
Q 002176 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARA 394 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~ 394 (956)
+|+++++|++|++|++|||||||||+|+|+|.+.. +.+++.+++.. +..+.||++.|+++++.+.+
T Consensus 234 ik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~-e~~~~hp~~~Ai~~~~~~~~---- 299 (536)
T TIGR01512 234 IKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAA-EQASSHPLARAIVDYARKRE---- 299 (536)
T ss_pred EcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHH-hccCCCcHHHHHHHHHHhcC----
Confidence 99999999999999999999999999999998753 12566666543 34556899999998764321
Q ss_pred ccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc
Q 002176 395 NIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK 474 (956)
Q Consensus 395 ~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~ 474 (956)
.....+..|. +.... ..+|+.+ ..|+++.+.+.. .+.+..+|.+++.++..
T Consensus 300 ~~~~~~~~~g----~gi~~---~~~g~~~--~ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~------- 350 (536)
T TIGR01512 300 NVESVEEVPG----EGVRA---VVDGGEV--RIGNPRSLEAAV-------------GARPESAGKTIVHVARD------- 350 (536)
T ss_pred CCcceEEecC----CeEEE---EECCeEE--EEcCHHHHhhcC-------------CcchhhCCCeEEEEEEC-------
Confidence 1222222221 11111 1245543 458887653311 11456788888887754
Q ss_pred cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcc
Q 002176 475 ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVAL 553 (956)
Q Consensus 475 ~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 553 (956)
..++|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+.
T Consensus 351 ------~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~--------------------- 403 (536)
T TIGR01512 351 ------GTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID--------------------- 403 (536)
T ss_pred ------CEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh---------------------
Confidence 38999999999999999999999999999 99999999999999999999984
Q ss_pred cHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec-cccHHHhhccceeecCCChhHH
Q 002176 554 PVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 554 ~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg-~gtd~Ak~aADivL~~~~~~~i 632 (956)
++|+++.|++|.++++.++++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++.+
T Consensus 404 ---------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l 474 (536)
T TIGR01512 404 ---------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRL 474 (536)
T ss_pred ---------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHH
Confidence 247889999999999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 633 ISAVLTSRAIFQRMKNYTIYAVSITIRIVL 662 (956)
Q Consensus 633 v~ai~~gR~~~~~i~~~i~~~~~~ni~~vl 662 (956)
.+++.+||++++|+++++.|++.+|+..+.
T Consensus 475 ~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~ 504 (536)
T TIGR01512 475 PQAIRLARRTRRIVKQNVVIALGIILLLIL 504 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999976444
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=4.5e-76 Score=703.70 Aligned_cols=516 Identities=27% Similarity=0.383 Sum_probs=431.2
Q ss_pred HHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECC-eEEEEeccCcCCC
Q 002176 77 MEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDG-KWMEEDAAILVPG 155 (956)
Q Consensus 77 l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG-~~~~I~~~~LvpG 155 (956)
+.++++++++.+ .|.++..|+++++++..+++++++|+++.+++|.+..+++++|+||| ++++|++++|+||
T Consensus 5 ~~~~~~~~~~~~-------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~G 77 (556)
T TIGR01525 5 MALATIAAYAMG-------LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVG 77 (556)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCC
Confidence 445556666653 78899999999999999999999999999999999999999999996 9999999999999
Q ss_pred cEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-
Q 002176 156 DIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST- 234 (956)
Q Consensus 156 DiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~- 234 (956)
|+|.+++||+|||||+|++|+. .||||+|||||.|+.|++|+.+|+||.+.+|+++++|++||.+|++|++.+++++.
T Consensus 78 Div~v~~G~~iP~Dg~vi~g~~-~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~ 156 (556)
T TIGR01525 78 DIVIVRPGERIPVDGVVISGES-EVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQ 156 (556)
T ss_pred CEEEECCCCEeccceEEEecce-EEeehhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHh
Confidence 9999999999999999999986 79999999999999999999999999999999999999999999999999999876
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCc
Q 002176 235 NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAI 314 (956)
Q Consensus 235 ~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~il 314 (956)
.+++++++.+++++.++...++++.++.+++++ ..... ..+..++++++++|||+||++++++++.+.++|+++|++
T Consensus 157 ~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~-~~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gil 233 (556)
T TIGR01525 157 SSKAPIQRLADRIASYYVPAVLAIALLTFVVWL-ALGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGIL 233 (556)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCce
Confidence 678899999999988765544333333333322 22222 678889999999999999999999999999999999999
Q ss_pred ccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCC--HHHHHHHHHHhccccccChHHHHHHHhcCChHHH
Q 002176 315 TKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVD--ADAVVLMAARASRVENQDAIDAAIVGMLADPKEA 392 (956)
Q Consensus 315 vk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~ 392 (956)
+|+++++|+||++|++|||||||||+|+|+|.+.. ... +.+ +++++.+++.++. ...||++.|++.++......
T Consensus 234 vk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~--~~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~~~~~ 309 (556)
T TIGR01525 234 IKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVE--PLD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKKRGLE 309 (556)
T ss_pred ecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEE--ecC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999998754 222 223 5667776665544 35689999999886432110
Q ss_pred hhccc-eeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCC
Q 002176 393 RANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD 471 (956)
Q Consensus 393 ~~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~ 471 (956)
... + ...++| .+..... .+|. ..+..|+++.+ + .... + ..+.+..++.++++|+|+++++...
T Consensus 310 ~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~-~~~~-~-~~~~~~~~~~~~~~g~~~~~v~~~~--- 373 (556)
T TIGR01525 310 LPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-E-LAAE-P-ISASPDLLNEGESQGKTVVFVAVDG--- 373 (556)
T ss_pred ccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-h-hcCC-C-chhhHHHHHHHhhCCcEEEEEEECC---
Confidence 000 1 111111 1111111 1341 24556888876 2 1111 1 1123455677889999999999753
Q ss_pred CCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcccccc
Q 002176 472 GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLG-VNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESI 550 (956)
Q Consensus 472 ~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~ 550 (956)
+++|.+.++|++|||++++|++|++.| +++.|+|||+..++.++++++|+.
T Consensus 374 ----------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 374 ----------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred ----------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 899999999999999999999999999 999999999999999999999983
Q ss_pred CcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChh
Q 002176 551 VALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 551 ~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (956)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.+++++
T Consensus 426 ------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 426 ------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred ------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCCCHH
Confidence 35889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 631 VIISAVLTSRAIFQRMKNYTIYAVSITIRIVLG 663 (956)
Q Consensus 631 ~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~ 663 (956)
.++.++++||++++||++++.|++.+|+..+..
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999876543
No 29
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=8.4e-76 Score=699.51 Aligned_cols=506 Identities=27% Similarity=0.404 Sum_probs=420.0
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEEC-CeEEEEeccCcCCCcEEEEeCCCeeecceEEee
Q 002176 96 DWQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLE 174 (956)
Q Consensus 96 ~~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~Rd-G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~ 174 (956)
+|.....++++++++..++.+.++|+++++++|++..|++++++|+ |++++|++++|+|||+|.+++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 3444455566667777888888889999999999999999999985 677999999999999999999999999999999
Q ss_pred cCCceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHH
Q 002176 175 GDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCIC 253 (956)
Q Consensus 175 g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~ 253 (956)
|++ .||||+|||||.|+.|++||.+|+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..++++.+++.
T Consensus 133 g~~-~vdes~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~ 211 (562)
T TIGR01511 133 GES-EVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVP 211 (562)
T ss_pred Cce-EEehHhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHH
Confidence 997 79999999999999999999999999999999999999999999999999999887 6788999999999988655
Q ss_pred HHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeec
Q 002176 254 SIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSD 333 (956)
Q Consensus 254 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~D 333 (956)
.+++..++.+ +.|. .++..++++++++|||+|++++++++..+..+++++|+++|+++++|.|+++|++|||
T Consensus 212 ~v~~~a~~~~-~~~~-------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 212 VVIAIALITF-VIWL-------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred HHHHHHHHHH-HHHH-------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 4433333222 2221 4778899999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEE
Q 002176 334 KTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTAL 413 (956)
Q Consensus 334 KTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv 413 (956)
||||||+|+|+|.+.. ... +.++++++.+++..+.. +.||++.|++.++.............+.+| .+....
T Consensus 284 KTGTLT~g~~~v~~i~--~~~-~~~~~~~l~~aa~~e~~-s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi~~ 355 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVH--VFG-DRDRTELLALAAALEAG-SEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGVEG 355 (562)
T ss_pred CCCCCcCCCEEEEEEe--cCC-CCCHHHHHHHHHHHhcc-CCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceEEE
Confidence 9999999999998754 222 45667777777665543 458999999987643211001111222222 111111
Q ss_pred EEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCC
Q 002176 414 TYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPP 493 (956)
Q Consensus 414 ~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~l 493 (956)
. .+|+ .+..|+++.+.+... . ++++.++|.+++.++... +++|++.++|++
T Consensus 356 ~---~~g~--~~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d~l 406 (562)
T TIGR01511 356 T---VEGT--KIQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALEDQL 406 (562)
T ss_pred E---ECCE--EEEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecccc
Confidence 1 2453 456799988643211 1 112457899999888654 899999999999
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhH
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHK 573 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K 573 (956)
|||++++|++|++.|+++.|+|||+..+|..+++++|+. +|+++.|++|
T Consensus 407 ~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-------------------------------~~~~~~p~~K 455 (562)
T TIGR01511 407 RPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-------------------------------VRAEVLPDDK 455 (562)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------EEccCChHHH
Confidence 999999999999999999999999999999999999982 4788899999
Q ss_pred HHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 574 YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYA 653 (956)
Q Consensus 574 ~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~ 653 (956)
.++++.+|++++.|+|+|||.||+||+++|||||+||.|++.++++||+++.++++..++.++++||+++++|++++.|+
T Consensus 456 ~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a 535 (562)
T TIGR01511 456 AALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWA 535 (562)
T ss_pred HHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCChH
Q 002176 654 VSITIRIVLGFMLLALIWKFDFPPF 678 (956)
Q Consensus 654 ~~~ni~~vl~~~~~~~~~~~~~~p~ 678 (956)
+.+|+..+...+...+.+++.++|.
T Consensus 536 ~~~n~~~i~la~~~~~~~g~~~~p~ 560 (562)
T TIGR01511 536 FGYNVIAIPIAAGVLYPIGILLSPA 560 (562)
T ss_pred HHHHHHHHHHHHhhhhccccccCCC
Confidence 9999876655554444445556653
No 30
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.4e-74 Score=720.28 Aligned_cols=528 Identities=24% Similarity=0.325 Sum_probs=434.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC
Q 002176 98 QDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP 177 (956)
Q Consensus 98 ~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~ 177 (956)
.....++++++++..++.+.+.|+.+++++|+++.|++++|+|||++++|+.++|+|||+|.+++||+|||||+|++|+.
T Consensus 287 ~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~ 366 (834)
T PRK10671 287 EASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEA 366 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceE
Confidence 33566777778888888888888999999999999999999999999999999999999999999999999999999985
Q ss_pred ceeeccccCCcCeeeecCCCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHH
Q 002176 178 LKIDQSALTGESLPVTKGPGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIA 256 (956)
Q Consensus 178 l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~ 256 (956)
.||||+|||||.|+.|++||.+|+||.+.+|.++++|+++|.+|.+||+.+++++. .+++++|+..++++.+++..++
T Consensus 367 -~vdeS~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~ 445 (834)
T PRK10671 367 -WLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVV 445 (834)
T ss_pred -EEeehhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999887 6688999999999887654443
Q ss_pred HHHHHHHHhHhhcccc--CccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeecc
Q 002176 257 VGMIVEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDK 334 (956)
Q Consensus 257 i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DK 334 (956)
+..++.+++ |...+. .+...+..++++++++|||||++++|+++..+..+++++|+++|+.+++|+++++|++||||
T Consensus 446 ~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDK 524 (834)
T PRK10671 446 VIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDK 524 (834)
T ss_pred HHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcC
Confidence 333322222 222222 23456677899999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCCCCcceEEE
Q 002176 335 TGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNPTDKRTALT 414 (956)
Q Consensus 335 TGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s~~kr~sv~ 414 (956)
|||||+|+|+|.+.. .. .+.++++++.+++..+. ...||++.|+++++.+. .... ..+|.....+ .+.
T Consensus 525 TGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g~-Gv~ 592 (834)
T PRK10671 525 TGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQ--VNGFRTLRGL-GVS 592 (834)
T ss_pred CCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCC--cccceEecce-EEE
Confidence 999999999998743 22 24567777777666544 34589999998765321 1111 1122222211 111
Q ss_pred EEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCC
Q 002176 415 YIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPR 494 (956)
Q Consensus 415 ~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR 494 (956)
.. .+|+ .+.+|+++.+.+.... .+.+.+.+++++++|.+++.++++. +++|++.+.|++|
T Consensus 593 ~~-~~g~--~~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~d~~r 652 (834)
T PRK10671 593 GE-AEGH--ALLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIRDPLR 652 (834)
T ss_pred EE-ECCE--EEEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEccCcch
Confidence 11 2454 3467999977542211 2345566778889999999999865 7999999999999
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHH
Q 002176 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~ 574 (956)
||++++|++|++.|+++.|+|||+..+|..+++++|+. ++|+++.|++|.
T Consensus 653 ~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~------------------------------~~~~~~~p~~K~ 702 (834)
T PRK10671 653 SDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID------------------------------EVIAGVLPDGKA 702 (834)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC------------------------------EEEeCCCHHHHH
Confidence 99999999999999999999999999999999999984 368999999999
Q ss_pred HHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 654 (956)
Q Consensus 575 ~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~ 654 (956)
++++.+|++|+.|+|+|||.||+|||++||+||+||+|+|.++++||+++++++++.|+.++++||++++||++++.|++
T Consensus 703 ~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~ 782 (834)
T PRK10671 703 EAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAF 782 (834)
T ss_pred HHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-hhcCCChHHHHHHHHhhcc
Q 002176 655 SITIRIVLGFMLLALI-WKFDFPPFMVLIIAILNDG 689 (956)
Q Consensus 655 ~~ni~~vl~~~~~~~~-~~~~~~p~~~l~i~~~~d~ 689 (956)
.+|+..+...++.+.. +++.++|+.-.+...+.+.
T Consensus 783 ~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~ 818 (834)
T PRK10671 783 IYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSI 818 (834)
T ss_pred HHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccce
Confidence 9998766544322211 2445777755444444443
No 31
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-74 Score=653.70 Aligned_cols=572 Identities=24% Similarity=0.293 Sum_probs=419.7
Q ss_pred CCHHHHHHHcCCCCCCCC-HHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhh
Q 002176 21 VPMEEVFETLRCNKEGLS-TEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQD 99 (956)
Q Consensus 21 ~~~~~~~~~l~~~~~GLt-~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~ 99 (956)
.|.++.+..++.+ +|++ .++++.-.++||.|+.+.+.++.-..|.+.-..|| +++.+..+.-|.+. ..|+.
T Consensus 148 fp~~~~~g~~~k~-~G~~~~~~i~~a~~~~G~N~fdi~vPtF~eLFkE~A~aPf-FVFQVFcvgLWCLD------eyWYy 219 (1160)
T KOG0209|consen 148 FPTDEPFGYFQKS-TGHEEESEIKLAKHKYGKNKFDIVVPTFSELFKEHAVAPF-FVFQVFCVGLWCLD------EYWYY 219 (1160)
T ss_pred cCcCCcchhhhhc-cCcchHHHHHHHHHHhcCCccccCCccHHHHHHHhccCce-eeHhHHhHHHHHhH------HHHHH
Confidence 4566666665544 4665 34444444569999999988888888888888898 45555555556663 46777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeC---CCeeecceEEeecC
Q 002176 100 FVGIVTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKL---GDIIPADARLLEGD 176 (956)
Q Consensus 100 ~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~---Gd~VPaD~~ll~g~ 176 (956)
.+.-+++++..-.--..|..+.-+..+. |..-+....|.|+++|+.+.++||.|||+|.|.. ...||||.+|+.|+
T Consensus 220 SlFtLfMli~fE~tlV~Qrm~~lse~R~-Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gs 298 (1160)
T KOG0209|consen 220 SLFTLFMLIAFEATLVKQRMRTLSEFRT-MGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGS 298 (1160)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEEecc
Confidence 7766666554433333444443332222 2333457899999999999999999999999987 56899999999999
Q ss_pred CceeeccccCCcCeeeecCC-----------------CCccccCCeecc-------------CcEEEEEEEecchhHHHh
Q 002176 177 PLKIDQSALTGESLPVTKGP-----------------GDSVYSGSTCKQ-------------GEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 177 ~l~VDeS~LTGES~pv~K~~-----------------g~~v~~Gs~v~~-------------G~~~~~V~~tG~~T~~gk 226 (956)
+ -||||+|||||.|..|.+ ..++|.||.+++ |.+.+.|++||.+|..|+
T Consensus 299 c-iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGk 377 (1160)
T KOG0209|consen 299 C-IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGK 377 (1160)
T ss_pred e-eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCc
Confidence 8 599999999999999976 136999999874 669999999999999999
Q ss_pred HHHhhhc-ccccchHHHHHHHHHHHH-HHHHHHHHHHHHHhHhhccc----cCccchHHHHHHHHHhhcCCchhHHHHHH
Q 002176 227 AAHLVDS-TNQQGHFQKVLTAIGNFC-ICSIAVGMIVEIIVMYPIQH----RKYRPGIDNLLVLLIGGIPIAMPTVLSVT 300 (956)
Q Consensus 227 i~~l~~~-~~~~~~l~~~~~~i~~~~-~~~i~i~~~~~~~~~~~~~~----~~~~~~~~~~l~llv~~iP~aLp~~~~v~ 300 (956)
+.+.+-- +++.+.-.+. .++ +..+.++.++.....|.-.. ++-...+..+..++...+|+.||+-++++
T Consensus 378 LvRtilf~aervTaNn~E-----tf~FILFLlVFAiaAa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmA 452 (1160)
T KOG0209|consen 378 LVRTILFSAERVTANNRE-----TFIFILFLLVFAIAAAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMA 452 (1160)
T ss_pred eeeeEEecceeeeeccHH-----HHHHHHHHHHHHHHhhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHH
Confidence 8775543 2333321111 111 11111111211111111111 11122344455667888999999999999
Q ss_pred HHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccC-------CCCHHHHHHHHHHhc--c
Q 002176 301 MAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAK-------GVDADAVVLMAARAS--R 371 (956)
Q Consensus 301 ~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~-------~~~~~~~l~~aa~~~--~ 371 (956)
.-.+...|+|.+++|..+-.+.-.|++|+.|||||||||+..|.|..+--..... ....+.+..+|++.+ .
T Consensus 453 VNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~ 532 (1160)
T KOG0209|consen 453 VNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVL 532 (1160)
T ss_pred HHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998643100000 112223333443332 1
Q ss_pred c---cccChHHHHHHHhcCChHHH------h----hccceeEeecCCCCCcceEEEEEcC----CCcEEEEEeCcHHHHH
Q 002176 372 V---ENQDAIDAAIVGMLADPKEA------R----ANIQEVHFLPFNPTDKRTALTYIDS----EGKMHRVSKGAPEQIL 434 (956)
Q Consensus 372 ~---~~~~~i~~ai~~~~~~~~~~------~----~~~~~l~~~pF~s~~kr~sv~~~~~----~g~~~~~~KGa~e~il 434 (956)
. --+||+++|.+...+..-+. + ...++.+.+.|.|.-|||+++.... +-+++..+|||||.|.
T Consensus 533 le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~ 612 (1160)
T KOG0209|consen 533 LEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQ 612 (1160)
T ss_pred hcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHH
Confidence 2 24699999998876432111 1 1366788899999999999886532 2367788999999999
Q ss_pred HhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCC--------CCccCCCCCceEEEEeccCCCCCccHHHHHHHHHh
Q 002176 435 NLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPD--------GRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALN 506 (956)
Q Consensus 435 ~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~--------~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~ 506 (956)
++.. ++++++++...+|+++|.||||++||+++. -++|+.|++|+|.|++.|.-|+|+|++++|+.|++
T Consensus 613 ~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~ 689 (1160)
T KOG0209|consen 613 EMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNN 689 (1160)
T ss_pred HHHH---hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhc
Confidence 8876 457788888899999999999999999873 23678899999999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCc---------------------------------------cccCCccc
Q 002176 507 LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSS---------------------------------------ALLGQNKD 547 (956)
Q Consensus 507 aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~---------------------------------------~l~g~~~~ 547 (956)
.+.+++||||||+.||.++|+++||..+..... +++|..++
T Consensus 690 SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~ 769 (1160)
T KOG0209|consen 690 SSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALD 769 (1160)
T ss_pred cCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHH
Confidence 999999999999999999999999965411100 11121111
Q ss_pred cccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002176 548 ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 548 ~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
.......+.+++..+.||||+.|.||..++..|++.|+.++|||||.||+.|||+||||||+=
T Consensus 770 ~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL 832 (1160)
T KOG0209|consen 770 HLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALL 832 (1160)
T ss_pred HHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehh
Confidence 111122355667778899999999999999999999999999999999999999999999985
No 32
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-74 Score=636.62 Aligned_cols=768 Identities=21% Similarity=0.255 Sum_probs=515.1
Q ss_pred HHHHhcCCCccCcccccHH----HHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCC-CChhhHHHHHHHHHHHHHHHHHHH
Q 002176 44 ERLTIFGYNKLEEKQESKI----LKFLGFMWNPLSWVMEAAAIMAIALANGGGKP-PDWQDFVGIVTLLLINSTISFIEE 118 (956)
Q Consensus 44 ~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~~l~~aails~~~~~~~~~~-~~~~~~~~ii~~~li~~~i~~~~e 118 (956)
.++++|.||.+...|++.+ ..++.||+-+++.++++.++-+++.....|.. .+|...+.++.+.++-..++.+++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r 153 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKR 153 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5667888999998887653 35667888888888888887777765444332 234444444444445455555555
Q ss_pred HHHHHHHHHHhhcCCCcEEE-EECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecC----CceeeccccCCcCeeee
Q 002176 119 NNAGNAAAALMASLAPKSKV-LRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGD----PLKIDQSALTGESLPVT 193 (956)
Q Consensus 119 ~~a~~~~~~l~~~~~~~~~V-~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~----~l~VDeS~LTGES~pv~ 193 (956)
+++.+. ++ ..+.++ -|||-..+ +++++++||+|.++.+++||||.++++.+ .+.|-+-.|+||+.-+.
T Consensus 154 ~~rd~~---~N---se~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKL 226 (1051)
T KOG0210|consen 154 RRRDRE---LN---SEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKL 226 (1051)
T ss_pred HHhhhh---hh---hhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCccccee
Confidence 554443 22 233444 47776555 99999999999999999999999999533 25799999999996554
Q ss_pred cCC-----------------------------------------------CCccccCCeeccCcEEEEEEEecchhHHHh
Q 002176 194 KGP-----------------------------------------------GDSVYSGSTCKQGEIEAVVIATGVHTFFGK 226 (956)
Q Consensus 194 K~~-----------------------------------------------g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gk 226 (956)
|-| .|.++++|.+.+|.++|+|++||.+|..
T Consensus 227 rl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs-- 304 (1051)
T KOG0210|consen 227 RLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS-- 304 (1051)
T ss_pred eccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH--
Confidence 422 3579999999999999999999999964
Q ss_pred HHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHH
Q 002176 227 AAHLVDSTNQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSH 306 (956)
Q Consensus 227 i~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~ 306 (956)
.++......+.+.++..+|.+.+.+.+.+.+..+ +++.....+.+|...+.+++.++...||++|-+-+.++...-++
T Consensus 305 vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~--vmv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~ 382 (1051)
T KOG0210|consen 305 VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSI--VMVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSW 382 (1051)
T ss_pred HhccCCcccccceeeeecccHHHHHHHHHHHHHH--HHHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhh
Confidence 2222222255677888888888775544333222 22233344567888889999999999999999999999999888
Q ss_pred HHHh----CCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCH-----------------------
Q 002176 307 RLSL----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDA----------------------- 359 (956)
Q Consensus 307 ~l~~----~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~----------------------- 359 (956)
.+.. .|..+|+.+.-|+||+++++.+|||||||+|+|.+++........+.+.
T Consensus 383 ~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~ 462 (1051)
T KOG0210|consen 383 QIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGAL 462 (1051)
T ss_pred hcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccc
Confidence 8876 3688999999999999999999999999999999998765432211110
Q ss_pred -----------HHHHHHHHHhcccc----c--------cChHHHHHHHhc-----------------CChHHHhhcccee
Q 002176 360 -----------DAVVLMAARASRVE----N--------QDAIDAAIVGML-----------------ADPKEARANIQEV 399 (956)
Q Consensus 360 -----------~~~l~~aa~~~~~~----~--------~~~i~~ai~~~~-----------------~~~~~~~~~~~~l 399 (956)
.+..+..+.|+... + .+|.+.|+++.- ..+......|+++
T Consensus 463 ~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL 542 (1051)
T KOG0210|consen 463 SRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQIL 542 (1051)
T ss_pred hhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEE
Confidence 01222233333221 1 134444443311 1111123478999
Q ss_pred EeecCCCCCcceEEEEEcC-CCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCc----
Q 002176 400 HFLPFNPTDKRTALTYIDS-EGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRK---- 474 (956)
Q Consensus 400 ~~~pF~s~~kr~sv~~~~~-~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~---- 474 (956)
..+||+|+.|||.++++++ .|+...+.|||+-+|-.....+ +.+++....||++|+|+|.+|.|.+++++.
T Consensus 543 ~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe 618 (1051)
T KOG0210|consen 543 QVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFE 618 (1051)
T ss_pred EEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHH
Confidence 9999999999999999976 6889999999999988776654 345566778999999999999999986641
Q ss_pred ----------------------cCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 475 ----------------------ESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 475 ----------------------~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
...|.||+++|+.+.||++++|++.+++.||+|||+|||+|||+.+||+.||+..++.
T Consensus 619 ~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~ 698 (1051)
T KOG0210|consen 619 EAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLF 698 (1051)
T ss_pred HHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccce
Confidence 1368999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCC--------------------------ccccCCcccccc--CcccHHHHhhh--cceEEeeChhhHHHHHHHHhh
Q 002176 533 TNMYPS--------------------------SALLGQNKDESI--VALPVDELIEK--ADGFAGVFPEHKYEIVKRLQA 582 (956)
Q Consensus 533 ~~~~~~--------------------------~~l~g~~~~~~~--~~~~~~~~~~~--~~vfar~~Pe~K~~iV~~lq~ 582 (956)
.....- .++.|+.++-.+ -..|+-|+..+ +.|+|||+|+||+++++.+|+
T Consensus 699 sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~ 778 (1051)
T KOG0210|consen 699 SRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQK 778 (1051)
T ss_pred ecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHH
Confidence 532211 122222211100 11234444433 358999999999999999998
Q ss_pred C-CCEEEEEcCCccChhhhccCCeeEEe-c-cccHHHhhccceeecCCChhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q 002176 583 R-KHICGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAVL-TSRAIFQRMKNYTIYAVSITI 658 (956)
Q Consensus 583 ~-g~~V~m~GDGvNDapALk~AdVGIam-g-~gtd~Ak~aADivL~~~~~~~iv~ai~-~gR~~~~~i~~~i~~~~~~ni 658 (956)
+ |..|+.+|||-||+.|+++||+||++ | +|-+|+- |||+.+++ |+.+-+++. |||..|+|-.+...|.+-...
T Consensus 779 ~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL-AADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL 855 (1051)
T KOG0210|consen 779 KTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL-AADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGL 855 (1051)
T ss_pred hhCceEEEEcCCCccchheeecccceeeecccccccch-hccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhH
Confidence 6 89999999999999999999999998 5 6666555 99999976 788877665 799999999988887765544
Q ss_pred HHHHHHHHHHHhhhcCCCh-------HHHHHHHHhhcccccccccCCCCCCC------------CCCccchHHHHHHHHH
Q 002176 659 RIVLGFMLLALIWKFDFPP-------FMVLIIAILNDGTIMTISKDRVKPSP------------LPDSWKLAEIFTTGVI 719 (956)
Q Consensus 659 ~~vl~~~~~~~~~~~~~~p-------~~~l~i~~~~d~~~~~l~~d~~~p~~------------~p~~~~~~~~~~~~~~ 719 (956)
.+..+..++... |.|.| +++.+..+.+-.+.+++-.|+.-.+. ...+....+-|..|++
T Consensus 856 ~Is~~Qavfs~v--~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvL 933 (1051)
T KOG0210|consen 856 IISTMQAVFSSV--FYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVL 933 (1051)
T ss_pred HHHHHHHHHHHH--hhhcchHHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhh
Confidence 433333332221 22323 33445555555556677666642211 1111122344666677
Q ss_pred HHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccChhHHHHHHH
Q 002176 720 LGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQALIFVTRARSWSFVDRPGLLLVLAF 799 (956)
Q Consensus 720 ~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~rs~~~~~~~~~~~~l~~~~ 799 (956)
+.+|++.+....+++.+.+.|+- . .++.|+..+....++...-.+.|. +.++++-
T Consensus 934 ISiYQG~vim~g~~~l~~~ef~~------------------i-vaisFtaLi~tELiMVaLtv~tw~------~~m~vae 988 (1051)
T KOG0210|consen 934 ISIYQGSVIMYGALLLFDTEFIH------------------I-VAISFTALILTELIMVALTVRTWH------WLMVVAE 988 (1051)
T ss_pred HHHHcccHHHHHHHHHhhhhheE------------------e-eeeeeHHHHHHHHHHHhhhhhhhh------HHHHHHH
Confidence 77777766655444444332210 0 011112222222222122223342 2233333
Q ss_pred HHHHHHH-HHHHHhccccccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 002176 800 AVAQLIA-TLIAVYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFFIRYALSGKA 857 (956)
Q Consensus 800 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~r~~~~~~~ 857 (956)
.+++.+. ..+++...+ |..-...+|.++..+.++.++..+|..+.|++.|++-|+..
T Consensus 989 ~lsL~~Yivsl~~l~~y-fd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSY 1046 (1051)
T KOG0210|consen 989 LLSLALYIVSLAFLHEY-FDRYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSY 1046 (1051)
T ss_pred HHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcch
Confidence 3222111 111111110 11111234555555667778888899999999998887643
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-64 Score=545.64 Aligned_cols=520 Identities=27% Similarity=0.393 Sum_probs=402.9
Q ss_pred HHHhhHHHHHHHHHHHHHHHh----cCCCCCCChhhHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhhc-CCCcEEE
Q 002176 68 FMWNPLSWVMEAAAIMAIALA----NGGGKPPDWQDFVGIVTLLLINST----ISFIEENNAGNAAAALMAS-LAPKSKV 138 (956)
Q Consensus 68 ~~~~p~~~~l~~aails~~~~----~~~~~~~~~~~~~~ii~~~li~~~----i~~~~e~~a~~~~~~l~~~-~~~~~~V 138 (956)
+.+||..++.++.++++.++. ..++....+.....|.+++.+..+ -+.+.|-|.+...+.|++. ....+++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 456888777777777666332 222211233333333333333333 3445555544445555442 2235677
Q ss_pred EEC-CeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCC---CccccCCeeccCcEEEE
Q 002176 139 LRD-GKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPG---DSVYSGSTCKQGEIEAV 214 (956)
Q Consensus 139 ~Rd-G~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g---~~v~~Gs~v~~G~~~~~ 214 (956)
+++ |.++.+++.+|+.||+|.++.||+||+||-++||.+ +||||++||||-||-|++| +.|-.||.+.+..++..
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~ir 187 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIR 187 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEE
Confidence 776 899999999999999999999999999999999998 8999999999999999998 67999999999999999
Q ss_pred EEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc--CccchHHHHHHHHHhhcCC
Q 002176 215 VIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHR--KYRPGIDNLLVLLIGGIPI 291 (956)
Q Consensus 215 V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~ 291 (956)
+++.-.+|++-|+..+++.+ .+++|-+--++-+..-+. .+++ +...-+|++..+ .-...+..+++++++.||-
T Consensus 188 ita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LT-liFL---~~~~Tl~p~a~y~~g~~~~i~~LiALlV~LIPT 263 (681)
T COG2216 188 ITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLT-LIFL---LAVATLYPFAIYSGGGAASVTVLVALLVCLIPT 263 (681)
T ss_pred EEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHH-HHHH---HHHHhhhhHHHHcCCCCcCHHHHHHHHHHHhcc
Confidence 99999999999999999987 566775554443321110 1111 111111211111 1123466778999999999
Q ss_pred chhHHHHHHHHHHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhcc
Q 002176 292 AMPTVLSVTMAIGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASR 371 (956)
Q Consensus 292 aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~ 371 (956)
...--++..--.|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+=.-.+.. + .++.+.+++...|..+|-
T Consensus 264 TIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~--p-~~gv~~~~la~aa~lsSl 340 (681)
T COG2216 264 TIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI--P-VPGVSEEELADAAQLASL 340 (681)
T ss_pred cHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee--c-CCCCCHHHHHHHHHHhhh
Confidence 9888888777789999999999999999999999999999999999999875444322 2 247888888777777665
Q ss_pred ccccChHHHHHHHhcCChH-HHh-hccc-eeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCch-HHHHHH
Q 002176 372 VENQDAIDAAIVGMLADPK-EAR-ANIQ-EVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKS-EIERRV 447 (956)
Q Consensus 372 ~~~~~~i~~ai~~~~~~~~-~~~-~~~~-~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~-~~~~~~ 447 (956)
... .|...+++..+.+.. +.+ .... ..+++||+.+.+++.+-. ++| ..+-|||.+.+.+..+... ..++.+
T Consensus 341 ~De-TpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~~l 415 (681)
T COG2216 341 ADE-TPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPEDL 415 (681)
T ss_pred ccC-CCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCHHH
Confidence 433 466666666543221 111 1111 357899998877666543 233 4567999999999876433 367788
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH
Q 002176 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR 527 (956)
Q Consensus 448 ~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~ 527 (956)
++..++-++.|-..|+++... +++|.+.+.|-+||+.+|-+.+||++||+.+|+||||+.||..||+
T Consensus 416 ~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~ 482 (681)
T COG2216 416 DAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 482 (681)
T ss_pred HHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH
Confidence 899999999999999999765 8999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002176 528 RLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 528 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+.|++ +..|+++||+|.++|+.-|.+|+.|+|||||.||+|||.+||||+
T Consensus 483 EAGVD------------------------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~ 532 (681)
T COG2216 483 EAGVD------------------------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGV 532 (681)
T ss_pred HhCch------------------------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhh
Confidence 99985 247999999999999999999999999999999999999999999
Q ss_pred EeccccHHHhhccceeecCCChhHHHHHHHHHHHHH
Q 002176 608 AVADATDAARSASDIVLTEPGLSVIISAVLTSRAIF 643 (956)
Q Consensus 608 amg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~ 643 (956)
||.+||++||||+.+|=+|.|...+++.++.|++..
T Consensus 533 AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlL 568 (681)
T COG2216 533 AMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLL 568 (681)
T ss_pred hhccccHHHHHhhcccccCCCccceehHhhhhhhhe
Confidence 999999999999999999999999999999999864
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=2.6e-35 Score=314.66 Aligned_cols=219 Identities=36% Similarity=0.537 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-EEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEee-cCCcee
Q 002176 103 IVTLLLINSTISFIEENNAGNAAAALMASLAPK-SKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKI 180 (956)
Q Consensus 103 ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~-~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~-g~~l~V 180 (956)
|+++++++..+++++++++++..+++++..+++ ++|+|||++++++++||+|||+|.|++||++||||+|++ |+ +.|
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~v 80 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AYV 80 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-ccc
Confidence 567778889999999999999999999888887 999999999999999999999999999999999999999 66 589
Q ss_pred eccccCCcCeeeecC-----CCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcc-cccchHHHHHHHHHHHHHHH
Q 002176 181 DQSALTGESLPVTKG-----PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDST-NQQGHFQKVLTAIGNFCICS 254 (956)
Q Consensus 181 DeS~LTGES~pv~K~-----~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~l~~~~~~i~~~~~~~ 254 (956)
|||.||||+.|+.|. +++.+|+||.+.+|.+.++|++||.+|+.|++.+.+... .+++++++.++++..+++..
T Consensus 81 d~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (230)
T PF00122_consen 81 DESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIII 160 (230)
T ss_dssp ECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhc
Confidence 999999999999999 999999999999999999999999999999999998776 44689999999998876554
Q ss_pred HHHHHHHHHHhHhhc--cccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHhCCCcccccchhhh
Q 002176 255 IAVGMIVEIIVMYPI--QHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSLQGAITKRMTAIEE 323 (956)
Q Consensus 255 i~i~~~~~~~~~~~~--~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~l~~~~ilvk~~~~lE~ 323 (956)
++++.++.+ +.+.. ...++...+..++.+++.+||++||+++++++..++++|+++|+++|+++++|+
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 161 ILAIAILVF-IIWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHH-HHCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ccccchhhh-ccceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 443333333 22333 456788889999999999999999999999999999999999999999999995
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.93 E-value=1.9e-26 Score=242.64 Aligned_cols=211 Identities=33% Similarity=0.441 Sum_probs=150.0
Q ss_pred ceEEeeccccceeeCceeEEeeeeeeccCCCCHHHHHHHHHHhccccccChHHHHHHHhcCChHHHhhccceeEeecCCC
Q 002176 327 MDVLCSDKTGTLTLNKLSVDKNLIEIFAKGVDADAVVLMAARASRVENQDAIDAAIVGMLADPKEARANIQEVHFLPFNP 406 (956)
Q Consensus 327 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~aa~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~s 406 (956)
|++||||||||||+|+|.+. . .....++..+... .....+|++.++.......... .. ..+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v~-----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~-----~~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSVA-----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KS-----LESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEEE-----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SC-----CEEEEE
T ss_pred CeEEEEecCCCcccCeEEEE-----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hh-----hhhhee
Confidence 68999999999999999981 1 3445555555433 3344579999988775432211 11 111111
Q ss_pred CCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcCchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEE
Q 002176 407 TDKRTALTYIDSEGKMHRVSKGAPEQILNLVRNKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGL 486 (956)
Q Consensus 407 ~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGl 486 (956)
...+...... ++. +. |+++.+.+..... ... .........+|...+.++. ++.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~-------------~~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV--ISP--DLVEEIQESQGRTVIVLAV-------------NLIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH--HHH--HHHHHHHHHHHHHCEEEEE-------------SHEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc--ccc--chhhhHHHhhCCcccceee-------------cCeEEEE
Confidence 1122211111 122 22 8888887655431 111 1111223455555666654 3589999
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002176 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
+.+.|+||||++++|+.|+++|++++|+|||+..+|.++++++||.. ..+|+
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----------------------------~~v~a 173 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----------------------------SIVFA 173 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----------------------------EEEEE
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----------------------------ccccc
Confidence 99999999999999999999999999999999999999999999942 13799
Q ss_pred ee--ChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCC
Q 002176 567 GV--FPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (956)
Q Consensus 567 r~--~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 604 (956)
++ +|++| .++++.||.+++.|+|+|||+||++|+|+||
T Consensus 174 ~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 174 RVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp SHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 99 99999 9999999987789999999999999999997
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.62 E-value=2.4e-15 Score=138.34 Aligned_cols=123 Identities=26% Similarity=0.395 Sum_probs=108.3
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhh
Q 002176 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
...+.++---++=++++++|++|++. ++|++.|||...+-...|+-+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56788888889999999999999999 99999999999999999999998632
Q ss_pred cceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe-c--cccHHHhhccceeecCCChhHHHHH
Q 002176 562 ADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-A--DATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 562 ~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-g--~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
++||...|+.|.++++.|++.+++|.|+|||+||.+||++||+||.. + +.++-+.++||+|+-+ ...+++.
T Consensus 72 -rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 72 -RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 57999999999999999999999999999999999999999999986 4 4567778999999954 4444443
No 37
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.40 E-value=4.9e-13 Score=114.56 Aligned_cols=67 Identities=36% Similarity=0.496 Sum_probs=60.9
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCc-ccccHHHHHHHHHHhhHHHHHHHHHHHH
Q 002176 18 LENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEE-KQESKILKFLGFMWNPLSWVMEAAAIMA 84 (956)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~-~~~~~~~~~l~~~~~p~~~~l~~aails 84 (956)
||+++.+++++.|+++ .+|||++||++|+++||+|++++ ++++.|..|+++|.+|++++|++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 7999999999999966 78999999999999999999965 4578889999999999999999999886
No 38
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.33 E-value=1.8e-08 Score=114.69 Aligned_cols=208 Identities=17% Similarity=0.195 Sum_probs=143.8
Q ss_pred ceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCc---------------
Q 002176 481 WQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQN--------------- 545 (956)
Q Consensus 481 l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~--------------- 545 (956)
-.|.|++....++|++....|+.|-++-|+.+-.+-.+....+-.|.++||.........+...+
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 47999999999999999999999999999999999999999999999999965322111111000
Q ss_pred ----------------------cccc-----------c--------CcccHHH-----------------HhhhcceEEe
Q 002176 546 ----------------------KDES-----------I--------VALPVDE-----------------LIEKADGFAG 567 (956)
Q Consensus 546 ----------------------~~~~-----------~--------~~~~~~~-----------------~~~~~~vfar 567 (956)
++.. + ++.+..+ +-.-+..|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 0000 0 0000111 0011126899
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccCh--hhhccCCeeEEecc-------------ccHHHh-hcc-----------
Q 002176 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDA--PALKKADIGIAVAD-------------ATDAAR-SAS----------- 620 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa--pALk~AdVGIamg~-------------gtd~Ak-~aA----------- 620 (956)
++|+.-.++++.+|++|++|+.+|.-.|-. --.-+|||+||+.. ++.... +|.
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 999999999999999999999999998843 34577999999852 111111 122
Q ss_pred ------ceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhcCCChHHHHHHHHhhc
Q 002176 621 ------DIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLA-LIWKFDFPPFMVLIIAILND 688 (956)
Q Consensus 621 ------DivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~~vl~~~~~~-~~~~~~~~p~~~l~i~~~~d 688 (956)
|+-+-...+-.|..+|+-+|....-+|+...|.+......++..++.. ++.+..|+.-+++|...+--
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~ 1129 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI 1129 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH
Confidence 333333345567888889999999999999999988877666555543 34456666667777776643
No 39
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.09 E-value=2.1e-10 Score=96.74 Aligned_cols=59 Identities=39% Similarity=0.612 Sum_probs=53.5
Q ss_pred HcCCCCC-CCCHHHHHHHHHhcCCCccCccc-ccHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 002176 29 TLRCNKE-GLSTEAAEERLTIFGYNKLEEKQ-ESKILKFLGFMWNPLSWVMEAAAIMAIAL 87 (956)
Q Consensus 29 ~l~~~~~-GLt~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~~l~~aails~~~ 87 (956)
+|+++.+ |||++|+++|+++||+|++++++ .+.|..|+++|++|+.++|++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4677755 99999999999999999998876 78889999999999999999999999876
No 40
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.07 E-value=2.4e-09 Score=110.17 Aligned_cols=167 Identities=16% Similarity=0.202 Sum_probs=102.3
Q ss_pred hcCCChHHHHHHHHhhccc-ccccccCCCCC------CCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCc
Q 002176 672 KFDFPPFMVLIIAILNDGT-IMTISKDRVKP------SPLPDS-WKLAEIFTTGVILGGYLAMMTVIFFWAAYQTDFFPR 743 (956)
Q Consensus 672 ~~~~~p~~~l~i~~~~d~~-~~~l~~d~~~p------~~~p~~-~~~~~~~~~~~~~G~~~~~~~~~~f~~~~~~~~~~~ 743 (956)
|.|++|+|++|+|+++|.+ .+++++|+.++ |++++. ...++.+...+..|+++++++++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 4689999999999999988 68998887632 332333 3345677777899999999999888776641
Q ss_pred ccCcccCCCCchhhHHHHHHHHHHHHHHHHHH-HHHHHhcCCCcccc--C--hhHHHHHHHHHHHHHHHHHHHhcc--cc
Q 002176 744 TFGVSSLHEKDIDDWKKLASAIYLQVSTISQA-LIFVTRARSWSFVD--R--PGLLLVLAFAVAQLIATLIAVYAN--WS 816 (956)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~i~~~rs~~~~~~~--~--~~~~l~~~~~~~~~~~~~~~~~~~--~~ 816 (956)
+|......+.. . ...++++|...+.+|. ..+++|+++.+.+. + .|.+++.+++++.++. ++..|.+ -.
T Consensus 76 -~~~~~~~~~~~--~-~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~-~~i~~~P~~~~ 150 (182)
T PF00689_consen 76 -FGWDEETNNDN--L-AQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQ-ILIVYVPGLNR 150 (182)
T ss_dssp -TCSSSHHHTTC--H-HHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHH-HHHHHSTTHHH
T ss_pred -cccccccchhH--H-HHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHH-HHHhcchhhHh
Confidence 11110000000 1 2345556666667776 57899996654433 2 3556665555444333 3334433 12
Q ss_pred ccccCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 817 FAAIEGVGWGWAGVVWLYNLIFYIPLDFIKFF 848 (956)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 848 (956)
++++.+.++..|+.+++++++.++..|++|++
T Consensus 151 ~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 151 IFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 34566777777788899999999999999975
No 41
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.98 E-value=2.8e-09 Score=111.37 Aligned_cols=131 Identities=15% Similarity=0.149 Sum_probs=97.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+.........+.+. ..+.+ .--..|+
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~---g~~tG------------~~~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDS---DRVVG------------YQLRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecC---CeeEC------------eeecCcc
Confidence 68999999999999975 99999999999999999999995321110111000 00000 0114578
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTS 639 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~g 639 (956)
+|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-.. .+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~~-~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCcc-cCHHHHHHHHHHH
Confidence 999999999988888999999999999999999999998766666655555444 4577777777654
No 42
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.86 E-value=8.8e-09 Score=114.88 Aligned_cols=130 Identities=20% Similarity=0.287 Sum_probs=98.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE-eeCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA-GVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa-r~~P 570 (956)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+...+. +..+.. .+.. -+..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~----dg~ltg----------~v~g~iv~~ 246 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIM----DGKLTG----------NVLGDIVDA 246 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEE----CCEEEe----------EecCccCCc
Confidence 689999999999999999999999999888889999999853110000000 000000 0000 0234
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002176 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+.|.+.++.+.++ | +.|.++|||.||.+|++.|++|||| ++.+..++.||.++...++..++..+
T Consensus 247 k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 247 QYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCIL 315 (322)
T ss_pred ccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHh
Confidence 6788888887654 3 5799999999999999999999999 88899999999999998998888765
No 43
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.85 E-value=9e-09 Score=109.05 Aligned_cols=129 Identities=22% Similarity=0.284 Sum_probs=93.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe-eCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-~~P 570 (956)
+++|++++.++.|++.|+++.++||.....+..+.+.+|+..- +....... +..... .+.+. ..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~---~~~~~~----------~~~~~~~~~ 150 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE---DGKLTG----------LVEGPIVDA 150 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE---CCEEEE----------EecCcccCC
Confidence 6899999999999999999999999999999999999998531 11000000 000000 00011 123
Q ss_pred hhHHHHHHHHhhCC----CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002176 571 EHKYEIVKRLQARK----HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 571 e~K~~iV~~lq~~g----~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
..|.++++.+.++. ..|.|+||+.||.+|+++|+++++++ +.+..+++||++|.+++|..+...
T Consensus 151 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 151 SYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 44777777665443 35889999999999999999999985 567888899999999999887653
No 44
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.69 E-value=6.3e-08 Score=97.93 Aligned_cols=100 Identities=19% Similarity=0.269 Sum_probs=81.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe--eChhhHHHH
Q 002176 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--VFPEHKYEI 576 (956)
Q Consensus 499 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar--~~Pe~K~~i 576 (956)
.+|+.|++.|+++.++|+.+...+....+.+|+..- |.. -.|+--..+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------------------------------f~~~kpkp~~~~~~ 90 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------------------------------HEGIKKKTEPYAQM 90 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------------------------------EecCCCCHHHHHHH
Confidence 579999999999999999999999999999998521 111 124444555
Q ss_pred HHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC
Q 002176 577 VKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG 628 (956)
Q Consensus 577 V~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~ 628 (956)
++.++-....|+|+||+.||.+|++.|++++||+++.+..++.||+|...++
T Consensus 91 ~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 91 LEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 5555444457999999999999999999999999999999999999886544
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.67 E-value=1.1e-07 Score=101.34 Aligned_cols=148 Identities=24% Similarity=0.283 Sum_probs=101.1
Q ss_pred CCC-CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccc-c---CCc-----cc----------
Q 002176 490 FDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSAL-L---GQN-----KD---------- 547 (956)
Q Consensus 490 ~D~-lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~---g~~-----~~---------- 547 (956)
.|. +.+.+.++|+++++.|+++++.||.....+..+.+.+|+..... ....+ . +.. .+
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 444 67899999999999999999999999999999999999853110 00000 0 000 00
Q ss_pred --------------cc--------cCc---ccHHHHhhhcc---------eEEeeChhh--HHHHHHHHhhC----CCEE
Q 002176 548 --------------ES--------IVA---LPVDELIEKAD---------GFAGVFPEH--KYEIVKRLQAR----KHIC 587 (956)
Q Consensus 548 --------------~~--------~~~---~~~~~~~~~~~---------vfar~~Pe~--K~~iV~~lq~~----g~~V 587 (956)
.. ... .++.+.+++.. .+..+.|.. |..-++.+.+. ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 00 000 01112222111 112344433 77766666543 2358
Q ss_pred EEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002176 588 GMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 588 ~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.++||+.||.+|++.|++|+||+++.+..|++||+|..+++=..+..+++
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred EEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999999999999999999998877778877764
No 46
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=98.67 E-value=3.7e-08 Score=89.15 Aligned_cols=65 Identities=29% Similarity=0.412 Sum_probs=52.9
Q ss_pred ccChHHHHHHHhcCC------hHHHhhccceeEeecCCCCCcceEEEEEcCCCcEEEEEeCcHHHHHHhhcC
Q 002176 374 NQDAIDAAIVGMLAD------PKEARANIQEVHFLPFNPTDKRTALTYIDSEGKMHRVSKGAPEQILNLVRN 439 (956)
Q Consensus 374 ~~~~i~~ai~~~~~~------~~~~~~~~~~l~~~pF~s~~kr~sv~~~~~~g~~~~~~KGa~e~il~~~~~ 439 (956)
.++|.|.|++.++.. ....+..+++++.+||||++|||+++++ .++...+++|||||.|+++|+.
T Consensus 20 ~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 20 IGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 457888888776532 3456778999999999999999999998 3345677999999999999974
No 47
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.66 E-value=1.1e-07 Score=95.21 Aligned_cols=109 Identities=25% Similarity=0.340 Sum_probs=82.7
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002176 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
+|++|++.|+++.++||+....+..+.+++|+..- +.+ ..-.|+-..++.+.
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~------~~~----------------------~~~k~~~~~~~~~~ 87 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL------YQG----------------------QSNKLIAFSDILEK 87 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE------Eec----------------------ccchHHHHHHHHHH
Confidence 89999999999999999999999999999998521 100 01113333333333
Q ss_pred HhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHH
Q 002176 580 LQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAV 636 (956)
Q Consensus 580 lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai 636 (956)
+.-....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 88 ~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 88 LALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred cCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 3333457999999999999999999999999988999999999997654 55554444
No 48
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.65 E-value=8e-08 Score=101.58 Aligned_cols=144 Identities=20% Similarity=0.264 Sum_probs=97.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCccccCC-c-------cccc------------
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSSALLGQ-N-------KDES------------ 549 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~-~-------~~~~------------ 549 (956)
++-+++.++|++|++.|+++.+.||.....+..+++.+++..... ....+... . .+..
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 488899999999999999999999999999999999999853111 00000000 0 0000
Q ss_pred --c-------------Cc---ccHHHHhhhcc--e-----EEeeCh--hhHHHHHHHHhhC-C---CEEEEEcCCccChh
Q 002176 550 --I-------------VA---LPVDELIEKAD--G-----FAGVFP--EHKYEIVKRLQAR-K---HICGMTGDGVNDAP 598 (956)
Q Consensus 550 --~-------------~~---~~~~~~~~~~~--v-----far~~P--e~K~~iV~~lq~~-g---~~V~m~GDGvNDap 598 (956)
. .. ..+.+.+.+.. + +..++| ..|...++.+.+. | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 00 01111222211 1 122333 4788888777653 3 34899999999999
Q ss_pred hhccCCeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002176 599 ALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 599 ALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
|++.|++|+||++|.+.+|+.||+|..+++-..+.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999976665555543
No 49
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.60 E-value=1.5e-07 Score=98.96 Aligned_cols=119 Identities=20% Similarity=0.191 Sum_probs=85.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe-eC
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG-VF 569 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar-~~ 569 (956)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+.....+ .+...+ ..+. -.+... +.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an--~l~~~d--G~lt----------G~v~g~~~~ 141 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN--ELEIDD--GKLT----------GRVVGPICD 141 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee--EEEEeC--CEEe----------ceeeeeecC
Confidence 58999999999999999999999999999999999999999643211 110000 0000 023333 34
Q ss_pred hhhHHHHHHHHhh-CCC---EEEEEcCCccChhhhccCCeeEEeccccHHHhhccceee
Q 002176 570 PEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVL 624 (956)
Q Consensus 570 Pe~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL 624 (956)
.+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+|++.......+ .|+...
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~l~~-~a~~~~ 199 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRA-LADVRI 199 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHHHHH-HHHHhc
Confidence 4789988866655 354 48899999999999999999999985443333 444433
No 50
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.58 E-value=3.2e-07 Score=100.50 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=48.2
Q ss_pred CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002176 585 HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 585 ~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|+++|||.||.+||+.|++|+||++|.+.+|++||+|..+++=..+..+++
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 34899999999999999999999999999999999999998887778877774
No 51
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.56 E-value=5.5e-07 Score=98.32 Aligned_cols=154 Identities=21% Similarity=0.226 Sum_probs=105.9
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC---------CCccccCCcccc------
Q 002176 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY---------PSSALLGQNKDE------ 548 (956)
Q Consensus 485 Gli~~~D~-lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l~g~~~~~------ 548 (956)
|.+.-.|. +.+.++++|+++++.|+++.+.||.....+..+.+++|+..... ....+.....+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 34444444 89999999999999999999999999999999999999864100 000000000000
Q ss_pred -----------------------------------------------ccC----------cccHHHHh---hh-----cc
Q 002176 549 -----------------------------------------------SIV----------ALPVDELI---EK-----AD 563 (956)
Q Consensus 549 -----------------------------------------------~~~----------~~~~~~~~---~~-----~~ 563 (956)
... ....+++. .+ ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 00111111 11 11
Q ss_pred eE-------EeeCh--hhHHHHHHHHhh-CCCE---EEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChh
Q 002176 564 GF-------AGVFP--EHKYEIVKRLQA-RKHI---CGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 564 vf-------ar~~P--e~K~~iV~~lq~-~g~~---V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (956)
.+ -.+.| .+|..-++.+.+ .|-. |+++||+.||.+||+.|+.||||++|++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 23333 368877777766 3543 99999999999999999999999999999999999888888888
Q ss_pred HHHHHHHH
Q 002176 631 VIISAVLT 638 (956)
Q Consensus 631 ~iv~ai~~ 638 (956)
.+..++++
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 88888753
No 52
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.51 E-value=6e-07 Score=94.02 Aligned_cols=127 Identities=20% Similarity=0.230 Sum_probs=91.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++++.++.|++. +++.++|+-....+..+.+++|+..- +. ..+...+ +..... +.-..|+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~-~~~~~~~-~~~i~~------------~~~~~p~ 131 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FC-HSLEVDE-DGMITG------------YDLRQPD 131 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hc-ceEEECC-CCeEEC------------ccccccc
Confidence 5689999999999999 99999999999999999999998521 11 1110000 000000 0012378
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccce-eecCCChhHHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI-VLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi-vL~~~~~~~iv~ai 636 (956)
.|...++.++..+..+.|+|||.||.+|.++|++|+..+.+.+.....++. ++ +++..+...+
T Consensus 132 ~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 132 GKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred hHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 899999999988899999999999999999999999887554444455665 44 4566665444
No 53
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.48 E-value=6.9e-07 Score=94.94 Aligned_cols=140 Identities=22% Similarity=0.277 Sum_probs=95.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC--CCc-cccCC--------cccc------------
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY--PSS-ALLGQ--------NKDE------------ 548 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~-~l~g~--------~~~~------------ 548 (956)
.+.+.+.++|+++++.|+++++.||.+...+..+.+.+|+..... ... +.... ..+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 477889999999999999999999999999999999999642110 000 00000 0000
Q ss_pred -------cc-------------CcccHHHHhhhcc---------eEEeeCh--hhHHHHHHHHhhC-C---CEEEEEcCC
Q 002176 549 -------SI-------------VALPVDELIEKAD---------GFAGVFP--EHKYEIVKRLQAR-K---HICGMTGDG 593 (956)
Q Consensus 549 -------~~-------------~~~~~~~~~~~~~---------vfar~~P--e~K~~iV~~lq~~-g---~~V~m~GDG 593 (956)
.. ......++++... .+..+.| ..|..-++.+.++ | ..|.++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0001111222111 1223334 3687777776553 3 468999999
Q ss_pred ccChhhhccCCeeEEeccccHHHhhccceeecCCChhH
Q 002176 594 VNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 594 vNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~ 631 (956)
.||.+|++.|++|+||+++.+..|+.||.|..+++-..
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G 212 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEG 212 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCc
Confidence 99999999999999999999999999999987766666
No 54
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.46 E-value=1.8e-06 Score=94.75 Aligned_cols=65 Identities=18% Similarity=0.181 Sum_probs=52.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccce--eecCCChhHHHHHH
Q 002176 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDI--VLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADi--vL~~~~~~~iv~ai 636 (956)
.|..-++.|.+. | ..|+++|||-||.+||+.|+.||||++|.+.+|++||. |..+++-..+..++
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 366666666443 2 35899999999999999999999999999999999996 66677777777766
No 55
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.43 E-value=8e-07 Score=91.53 Aligned_cols=110 Identities=25% Similarity=0.359 Sum_probs=82.8
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHH
Q 002176 499 ETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVK 578 (956)
Q Consensus 499 ~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~ 578 (956)
.+|+.|++.|+++.++||.....+..+++++|+..- |.. .++|...++
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~------------------------------f~g--~~~k~~~l~ 102 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL------------------------------YQG--QSNKLIAFS 102 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee------------------------------ecC--CCcHHHHHH
Confidence 689999999999999999999999999999998421 111 123444444
Q ss_pred HH-hhC---CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHHHHH
Q 002176 579 RL-QAR---KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSR 640 (956)
Q Consensus 579 ~l-q~~---g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~~gR 640 (956)
.+ ++. ...|+|+||+.||.+|++.|+++++++++.+..+..||+++-.++ +..+.+.+...|
T Consensus 103 ~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 103 DLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 43 222 346999999999999999999999999888888989999995332 344555554333
No 56
>PRK10976 putative hydrolase; Provisional
Probab=98.41 E-value=1.6e-06 Score=94.82 Aligned_cols=65 Identities=20% Similarity=0.223 Sum_probs=51.4
Q ss_pred HHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc--eeecCCChhHHHHHHH
Q 002176 573 KYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD--IVLTEPGLSVIISAVL 637 (956)
Q Consensus 573 K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD--ivL~~~~~~~iv~ai~ 637 (956)
|..-++.+.+. | .-|+++|||-||.+||+.|+.|+||++|++.+|+.|| .|..+++=..+..+++
T Consensus 191 Kg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 191 KGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred hHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 55545544332 2 3489999999999999999999999999999999988 6776767677777663
No 57
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.39 E-value=8.6e-07 Score=92.30 Aligned_cols=117 Identities=27% Similarity=0.381 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+... +...... .+... . +.+.+-...|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~-~~~~~~~-~~~g~-~----------~p~~~~~~~~~ 146 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV-YSNELVF-DEKGF-I----------QPDGIVRVTFD 146 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE-EEEEEEE-cCCCe-E----------ecceeeEEccc
Confidence 6899999999999999999999999999999999999997421 1111111 00000 0 00122334567
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc
Q 002176 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASD 621 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD 621 (956)
.|.++++.+.++ ...+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 788777776543 23589999999999999999999999865555666666
No 58
>PRK08238 hypothetical protein; Validated
Probab=98.34 E-value=0.00014 Score=85.59 Aligned_cols=101 Identities=16% Similarity=0.207 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.+ +. ..++.|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigs-d~------------------~~~~kg~ 127 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFAS-DG------------------TTNLKGA 127 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeC-CC------------------ccccCCc
Confidence 5889999999999999999999999999999999999997321 1111 10 1245677
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR 617 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak 617 (956)
.|.+.++.....+ -+.++||..||.|+++.|+-.++++.+...++
T Consensus 128 ~K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 128 AKAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred hHHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 7866554332222 25789999999999999999999985554433
No 59
>PLN02887 hydrolase family protein
Probab=98.34 E-value=2.9e-06 Score=101.46 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=47.9
Q ss_pred EEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002176 586 ICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 586 ~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
-|+++|||.||.+||+.|+.||||++|.+..|++||+|..+++=..+..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 4899999999999999999999999999999999999998888788887774
No 60
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.32 E-value=2.1e-06 Score=92.02 Aligned_cols=143 Identities=19% Similarity=0.203 Sum_probs=98.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCcc-------------cc---------
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNK-------------DE--------- 548 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~-------------~~--------- 548 (956)
..+-+++.++|++++++|+++.+.||.....+..+..++++.... ....|.-. +.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~---I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYF---ICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEE---EEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhh---cccccceeeecccccchhhheeccchhheeeh
Confidence 457799999999999999999999999999999999999985211 00011000 00
Q ss_pred --------------------c------------------------------------cCcccHHH-------Hhhhc-c-
Q 002176 549 --------------------S------------------------------------IVALPVDE-------LIEKA-D- 563 (956)
Q Consensus 549 --------------------~------------------------------------~~~~~~~~-------~~~~~-~- 563 (956)
. .+...+++ ..... .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 0 00000111 11110 1
Q ss_pred -----eEEeeCh--hhHHHHHHHHhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHH
Q 002176 564 -----GFAGVFP--EHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 564 -----vfar~~P--e~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~i 632 (956)
-+-.++| ..|..-++.+.+. ...+.++||+-||.+||+.|+.|+||+++++..++.||.+....+=..+
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv 250 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGV 250 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHH
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChH
Confidence 1223444 5688777777642 3468899999999999999999999999999999999999987665777
Q ss_pred HHHH
Q 002176 633 ISAV 636 (956)
Q Consensus 633 v~ai 636 (956)
.++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 6654
No 61
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.30 E-value=8.5e-07 Score=91.57 Aligned_cols=92 Identities=25% Similarity=0.328 Sum_probs=70.7
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh-h-
Q 002176 495 HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE-H- 572 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe-~- 572 (956)
+++++.|+.++++|++++++||+....+..+++.+|++........+. +. .+....++.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~----~~-----------~~~~~~~~~~~~~~~ 156 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELF----DN-----------GGGIFTGRITGSNCG 156 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEE----CT-----------TCCEEEEEEEEEEES
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeee----ec-----------ccceeeeeECCCCCC
Confidence 888899999999999999999999999999999999964211111110 00 012245666665 4
Q ss_pred -HHHHHHHH------hhCCCEEEEEcCCccChhhhc
Q 002176 573 -KYEIVKRL------QARKHICGMTGDGVNDAPALK 601 (956)
Q Consensus 573 -K~~iV~~l------q~~g~~V~m~GDGvNDapALk 601 (956)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 157 ~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999986
No 62
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.29 E-value=4.1e-06 Score=91.74 Aligned_cols=66 Identities=23% Similarity=0.325 Sum_probs=53.7
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHH
Q 002176 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.++ | .-|+++||+.||.+|++.|++|+||+++.+..|+.||+|..+++=..+..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555544332 3 35899999999999999999999999999999999999998888888887774
No 63
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.27 E-value=5e-06 Score=87.93 Aligned_cols=134 Identities=12% Similarity=0.062 Sum_probs=87.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCCccccccCcccHHHHhhhcceE---E
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGF---A 566 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~vf---a 566 (956)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+.. ..+.+......... ...+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~---------~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH---------PCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC---------CCcccccc
Confidence 479999999999999999999999999999888888887543222111 11111111100000 0000 0
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh--hccceeecCCChhHHHHHH
Q 002176 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR--SASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak--~aADivL~~~~~~~iv~ai 636 (956)
++ ...|..+++.++.....|.|+|||.||.+|++.||+++|=+.-.+-.+ .-+.+.+ ++|..+...+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l 208 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKEL 208 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHH
Confidence 11 347999999998888889999999999999999999877542111111 1122223 5677776665
No 64
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.24 E-value=1e-05 Score=88.05 Aligned_cols=54 Identities=20% Similarity=0.226 Sum_probs=45.3
Q ss_pred CCEEEEEcCCccChhhhccCCeeEEecccc---HHHhhc--c-ceeecCCChhHHHHHHH
Q 002176 584 KHICGMTGDGVNDAPALKKADIGIAVADAT---DAARSA--S-DIVLTEPGLSVIISAVL 637 (956)
Q Consensus 584 g~~V~m~GDGvNDapALk~AdVGIamg~gt---d~Ak~a--A-DivL~~~~~~~iv~ai~ 637 (956)
...|.++||+.||.+|++.|+.||||+++. +..|+. | ++|..+++-..+..+++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 456999999999999999999999999987 468876 4 58777778788877774
No 65
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.24 E-value=2.4e-06 Score=85.10 Aligned_cols=110 Identities=22% Similarity=0.253 Sum_probs=76.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
.+-|++++.++.|++.|.+|.++||--...+..+|.++||+..+.....+.=.. +.........+ .-+...
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-~Gk~~gfd~~~--------ptsdsg 158 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-DGKYLGFDTNE--------PTSDSG 158 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc-CCcccccccCC--------ccccCC
Confidence 356899999999999999999999999999999999999975322211111000 00000000000 001134
Q ss_pred hHHHHHHHHhhC--CCEEEEEcCCccChhhhccCCeeEEec
Q 002176 572 HKYEIVKRLQAR--KHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 572 ~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
-|.++++.+++. -..++|+|||+||.+|+..||-=|+.+
T Consensus 159 gKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 159 GKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred ccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 799999999885 347999999999999999977766665
No 66
>PLN02954 phosphoserine phosphatase
Probab=98.15 E-value=1.5e-05 Score=84.71 Aligned_cols=131 Identities=19% Similarity=0.283 Sum_probs=83.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC-CCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT-NMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+........+ ........ .... ..+
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~--g~~~g~~~------~~~~--~~~ 153 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDS--GEYAGFDE------NEPT--SRS 153 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCC--CcEECccC------CCcc--cCC
Confidence 478999999999999999999999999999999999999963 111100000000 00000000 0000 112
Q ss_pred hhHHHHHHHHhhC-C-CEEEEEcCCccChhhhcc--CCeeEEeccc--cHHHhhccceeecCCChhHHHH
Q 002176 571 EHKYEIVKRLQAR-K-HICGMTGDGVNDAPALKK--ADIGIAVADA--TDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 571 e~K~~iV~~lq~~-g-~~V~m~GDGvNDapALk~--AdVGIamg~g--td~Ak~aADivL~~~~~~~iv~ 634 (956)
..|.+.++.+.++ | ..|.|+||+.||..|.++ ++++++.+.+ .+.....+|+++ +++..+..
T Consensus 154 ~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 154 GGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred ccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 3477777776654 2 468899999999999877 5776766532 233345689988 44665554
No 67
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.14 E-value=8.4e-06 Score=88.59 Aligned_cols=64 Identities=23% Similarity=0.274 Sum_probs=53.1
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002176 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
.|..-++.+.+. | ..|+++||+.||.+|++.|+.|+||+++++..|+.||++..+++-..+..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 477777766553 2 459999999999999999999999999999999999999987766665543
No 68
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.07 E-value=3.3e-05 Score=84.73 Aligned_cols=53 Identities=23% Similarity=0.167 Sum_probs=43.6
Q ss_pred CEEEEEcCCccChhhhccCCeeEEecccc-H---H--HhhccceeecCCChhHHHHHHH
Q 002176 585 HICGMTGDGVNDAPALKKADIGIAVADAT-D---A--ARSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 585 ~~V~m~GDGvNDapALk~AdVGIamg~gt-d---~--Ak~aADivL~~~~~~~iv~ai~ 637 (956)
..|.++|||-||.+||+.|++||||+++. + . -+..+|++....+-..+.++++
T Consensus 207 ~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 207 PTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred ceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 46899999999999999999999999544 2 1 3447899998888888888775
No 69
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.07 E-value=8.6e-06 Score=78.72 Aligned_cols=113 Identities=24% Similarity=0.413 Sum_probs=87.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHH
Q 002176 500 TIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKR 579 (956)
Q Consensus 500 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 579 (956)
.|+.+.++||+|-+|||.+......=|+.+||.. ...| -++|....+.
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~------~~qG--------------------------~~dK~~a~~~ 90 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH------LYQG--------------------------ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce------eeec--------------------------hHhHHHHHHH
Confidence 5899999999999999999999999999999952 1111 2567666665
Q ss_pred HhhC----CCEEEEEcCCccChhhhccCCeeEEeccccHHHhhccceeecCCC----hhHHHHHHHHHHHHHH
Q 002176 580 LQAR----KHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPG----LSVIISAVLTSRAIFQ 644 (956)
Q Consensus 580 lq~~----g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aADivL~~~~----~~~iv~ai~~gR~~~~ 644 (956)
|.++ -.-|+++||-.||-|+|++...++|+.++..-.++.||+|+...+ +..+.+.|...+..++
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 5543 346999999999999999999999999999999999999986554 3444555544444433
No 70
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.04 E-value=1.5e-05 Score=81.97 Aligned_cols=113 Identities=15% Similarity=0.056 Sum_probs=75.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCccc-HHHHhhhcceEEe-e
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALP-VDELIEKADGFAG-V 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~-~~~~~~~~~vfar-~ 568 (956)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++.. +... ++.. +.-...++.++.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~~~-~~~~--~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIYSN-PASF--DNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEecc-CceE--CCCCcEEEecCCCCccCcCC
Confidence 378999999999999999999999999999999999998885321 111211 1100 0000 0000000011111 1
Q ss_pred ChhhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCeeEE
Q 002176 569 FPEHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
....|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123599999999887 8889999999999999999987554
No 71
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.04 E-value=4.3e-05 Score=83.92 Aligned_cols=66 Identities=24% Similarity=0.298 Sum_probs=49.9
Q ss_pred hHHHHHHHHhh----CC-CEEEEEcCCccChhhhccCCeeEEeccccHHHh----hcc-ceee--cCCChhHHHHHHH
Q 002176 572 HKYEIVKRLQA----RK-HICGMTGDGVNDAPALKKADIGIAVADATDAAR----SAS-DIVL--TEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~----~g-~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak----~aA-DivL--~~~~~~~iv~ai~ 637 (956)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|++|++|.+..| .+| +.+. ..++=..+..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 45555544443 24 789999999999999999999999999999999 666 5666 3445566666663
No 72
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.99 E-value=1e-05 Score=82.38 Aligned_cols=101 Identities=22% Similarity=0.256 Sum_probs=70.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++|++.+.++.+++.|+++.++||.....+..+++.+|+..- +. ..+...+ +....... ..-....++
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~-~~-~~~~~~~-~g~~~g~~--------~~~~~~~~~ 141 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDV-FA-NRLEFDD-NGLLTGPI--------EGQVNPEGE 141 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchh-ee-eeEEECC-CCEEeCcc--------CCcccCCcc
Confidence 4689999999999999999999999999999999999998521 11 1110000 00000000 000124568
Q ss_pred hHHHHHHHHhhC----CCEEEEEcCCccChhhhccC
Q 002176 572 HKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA 603 (956)
Q Consensus 572 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A 603 (956)
.|...++.++++ ...|.|+|||.||.||++.|
T Consensus 142 ~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 142 CKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred hHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 899999887654 34689999999999999875
No 73
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.97 E-value=2.9e-05 Score=82.33 Aligned_cols=132 Identities=12% Similarity=0.041 Sum_probs=85.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC--CccccCCccccccCcccHHHHhhhcce--E-E
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP--SSALLGQNKDESIVALPVDELIEKADG--F-A 566 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~~v--f-a 566 (956)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +..+... ...+.|.......... .. + .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p---------~~~~~~~ 143 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP---------CDEHCQN 143 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC---------ccccccc
Confidence 68999999999999999999999999999999998887 6432110 0111111110000000 00 0 0
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHH--hhccceeecCCChhHHHHHH
Q 002176 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAA--RSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~A--k~aADivL~~~~~~~iv~ai 636 (956)
++ ...|..+++.++.....|.|+|||.||.+|.++||+.++-+.-.+.+ +..+.+.+ ++|..+...+
T Consensus 144 ~~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 144 HC-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred cC-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 01 13488899998887778999999999999999999977733111222 22244433 5577776655
No 74
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.91 E-value=7.1e-05 Score=79.42 Aligned_cols=125 Identities=17% Similarity=0.162 Sum_probs=90.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC-
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF- 569 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~- 569 (956)
.++.||+.+.++.|++.|+++.++||........+.+++|+... ....+.+.. +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~-------------------~~~~kp 150 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY--FSVVIGGDS-------------------LPNKKP 150 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC--ccEEEcCCC-------------------CCCCCc
Confidence 46889999999999999999999999999999999999998532 111111111 11122
Q ss_pred -hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEecc----ccHHHhhccceeecCCChhHHHHHHHH
Q 002176 570 -PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAVAD----ATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 570 -Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIamg~----gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
|+--..+.+.++.....+.|+||+.||..|.+.|++ +|.+.. ..+.....+|+++ +++..+...+.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 151 DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333345666666566779999999999999999999 566642 2344455788888 778888877754
No 75
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.88 E-value=3e-05 Score=80.94 Aligned_cols=108 Identities=17% Similarity=0.101 Sum_probs=77.2
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE-Eee
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGV 568 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf-ar~ 568 (956)
..++++++.+.++.+++.|+++.++||-....+..+++.+|+..- .......+. +....+. +- -.+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~--~g~~~g~----------~~~~~~ 151 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESE--DGIYTGN----------IDGNNC 151 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcC--CCEEeCC----------ccCCCC
Confidence 347899999999999999999999999999999999999998531 111111000 0000000 00 123
Q ss_pred ChhhHHHHHHHHhh-CCC---EEEEEcCCccChhhhccCCeeEEec
Q 002176 569 FPEHKYEIVKRLQA-RKH---ICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIamg 610 (956)
.++.|.+.++.+.+ .|. .+.++||+.||.|+++.|+.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 46788888877654 342 6889999999999999999999886
No 76
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.68 E-value=0.00025 Score=75.35 Aligned_cols=126 Identities=17% Similarity=0.188 Sum_probs=94.1
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (956)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..- ...+..+.... ...=.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~--F~~i~g~~~~~-----------------~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY--FDVIVGGDDVP-----------------PPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc--cceEEcCCCCC-----------------CCCcC
Confidence 457889999999999999999999999999999999999999642 11111111110 11224
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCC---eeEEecc--ccHHHhhccceeecCCChhHHHHHH
Q 002176 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad---VGIamg~--gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
|+....+.+.+....+.+.||||..||..|=|+|+ ||+..|. ........+|.++ ++++.+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 67777777777766457999999999999999998 6666663 4567777799999 5677766554
No 77
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.65 E-value=0.00023 Score=74.57 Aligned_cols=124 Identities=18% Similarity=0.143 Sum_probs=85.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+++++|++.|+++.++||.....+...-+.+|+... ...++...+. ...+-.|+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~-----------------~~~KP~~~ 135 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL--FDHVIGSDEV-----------------PRPKPAPD 135 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh--eeeEEecCcC-----------------CCCCCChH
Confidence 7889999999999999999999999998888888888888431 1111111100 01122233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Ee--c--cccHHHhhccceeecCCChhHHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV--A--DATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am--g--~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=.++++.++-....+.|+||+.+|..|-++|++.. ++ | +..+..+..+|+++ +++..+...+
T Consensus 136 ~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 136 IVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 334555556555567999999999999999999863 33 2 23345567799988 5566665544
No 78
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.64 E-value=0.00013 Score=69.95 Aligned_cols=118 Identities=15% Similarity=0.071 Sum_probs=78.0
Q ss_pred ccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 488 ~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.-..++++++.+.+++|++.|++++++||.....+....+++|+... ...++....... ...............+.+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~ 96 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAI-YYPKEGLFLGGGPFDIGK 96 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhh-hcccccccccccccccCC
Confidence 44568999999999999999999999999999999999999987321 111111000000 000000000011123345
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhcc-CCeeEE
Q 002176 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK-ADIGIA 608 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~-AdVGIa 608 (956)
-.|+.+..+.+.+......+.++||+.||.+|.+. ..-+|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 97 PNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 56777777888877666789999999999999998 554554
No 79
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.39 E-value=0.00078 Score=73.97 Aligned_cols=125 Identities=15% Similarity=0.159 Sum_probs=82.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.++++.|++.|+++.++||-....+..+..+.|+.... ..++.+.+.. ...-.|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~-----------------~~Kp~p 160 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP-----------------QKKPDP 160 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC-----------------CCCCCc
Confidence 478999999999999999999999999998888888888874311 1111111100 001112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecc----ccHHHhhccceeecCCChhHHHHHH
Q 002176 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD----ATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~----gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+-=..+.+.+.-....|.|+||+.||..|.++|++- +++.. ..+..+..+|.++ +++..+..++
T Consensus 161 ~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~ 229 (272)
T PRK13223 161 AALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGC 229 (272)
T ss_pred HHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHH
Confidence 222334444433446799999999999999999973 44432 2333445789988 4577766543
No 80
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.33 E-value=0.00092 Score=70.51 Aligned_cols=124 Identities=18% Similarity=0.138 Sum_probs=84.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+..- ...++.+.+.. ...-.|+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~-----------------~~Kp~p~ 142 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE-----------------HAKPDPE 142 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC-----------------CCCCCcH
Confidence 4779999999999999999999999999999988899998531 11122111100 0112233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Ee--ccc--cHHHhhccceeecCCChhHHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AV--ADA--TDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am--g~g--td~Ak~aADivL~~~~~~~iv~ai 636 (956)
--.++.+.+.-....+.|+||..+|..|-++|++-. ++ +.. .+.....+|+++ +++..+...+
T Consensus 143 ~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 143 PVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 334555555544567899999999999999999842 23 311 223445688887 5677776654
No 81
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=97.32 E-value=0.00066 Score=73.51 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=93.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCC----CCc-cccCC--cccc---------------
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY----PSS-ALLGQ--NKDE--------------- 548 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~~~-~l~g~--~~~~--------------- 548 (956)
.+..|...++++++++.|+.++..||......+.+.+++++....+ ... +..+. ..+.
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567899999999999999999999999999999999888754310 000 11000 0000
Q ss_pred --------c-----------------cCccc----H---HHHhhhc--ce---EE-----eeCh--hhHHHHHHHHhhC-
Q 002176 549 --------S-----------------IVALP----V---DELIEKA--DG---FA-----GVFP--EHKYEIVKRLQAR- 583 (956)
Q Consensus 549 --------~-----------------~~~~~----~---~~~~~~~--~v---fa-----r~~P--e~K~~iV~~lq~~- 583 (956)
. ..... + .+.+... ++ ++ .+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0 00000 1 1111111 11 11 3344 4688878877653
Q ss_pred ---CCEEEEEcCCccChhhhcc-CCeeEEeccccHHHhhccc-------eeecCCChhHHHHHHH
Q 002176 584 ---KHICGMTGDGVNDAPALKK-ADIGIAVADATDAARSASD-------IVLTEPGLSVIISAVL 637 (956)
Q Consensus 584 ---g~~V~m~GDGvNDapALk~-AdVGIamg~gtd~Ak~aAD-------ivL~~~~~~~iv~ai~ 637 (956)
...|.++||+.||.+|++. ++.|++|+++.+..++.+| ++-....-+.+.+++.
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3568999999999999998 7799999999888886543 4443444556666553
No 82
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=97.31 E-value=0.00094 Score=71.17 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=38.5
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4555667999999999999999999999999999999999984
No 83
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.22 E-value=0.0011 Score=69.65 Aligned_cols=120 Identities=16% Similarity=0.139 Sum_probs=80.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC--
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF-- 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~-- 569 (956)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+... ...++.+.+ ..+..
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~-------------------~~~~Kp~ 143 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY--FSVLIGGDS-------------------LAQRKPH 143 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh--CcEEEecCC-------------------CCCCCCC
Confidence 6889999999999999999999999999999999999998532 111111111 01112
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-eccc----cHHHhhccceeecCCChhHHHH
Q 002176 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA----TDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~g----td~Ak~aADivL~~~~~~~iv~ 634 (956)
|+-=.+..+.+.-....+.|+||..||..|.++|++-.. +..| .+.....+|+++ +++..+..
T Consensus 144 p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 222233444444444569999999999999999998754 4222 123334688887 45665543
No 84
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=97.09 E-value=0.00064 Score=72.92 Aligned_cols=66 Identities=18% Similarity=0.208 Sum_probs=53.8
Q ss_pred hHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHHHhhccc----eeecCCChhHHHHHHH
Q 002176 572 HKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDAARSASD----IVLTEPGLSVIISAVL 637 (956)
Q Consensus 572 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~aAD----ivL~~~~~~~iv~ai~ 637 (956)
.|..-++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=..+.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 677777777553 3 2588999999999999999999999999999999999 6665666566777764
No 85
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.05 E-value=0.0034 Score=66.55 Aligned_cols=39 Identities=21% Similarity=0.233 Sum_probs=35.9
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
-+.++++|++|++.||+++++||.....+..+.+.+|+.
T Consensus 18 ~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 18 WQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred cHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 344899999999999999999999999999999999985
No 86
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.02 E-value=0.0015 Score=69.26 Aligned_cols=122 Identities=15% Similarity=0.192 Sum_probs=78.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-+|.|++.++++.|++.|+++.++|+........+.+++|+..-. ..++.+.+.. ...-.|
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~-----------------~~Kp~~ 151 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP-----------------YSKPHP 151 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC-----------------CCCCCH
Confidence 367899999999999999999999999999999999999985321 1122111100 111223
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEe-ccc---cHHHhhccceeecCCChhHHH
Q 002176 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAV-ADA---TDAARSASDIVLTEPGLSVII 633 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-g~g---td~Ak~aADivL~~~~~~~iv 633 (956)
+-=..+.+.+.-..+.|.|+||..||+.|-++|++.... ..+ .+.-...+|+++ .+|..+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 322223333332335689999999999999999987543 322 222223577777 4455543
No 87
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.95 E-value=0.0079 Score=65.47 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=84.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCC----------CccccCCccccccCcccHHHHhh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYP----------SSALLGQNKDESIVALPVDELIE 560 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~----------~~~l~g~~~~~~~~~~~~~~~~~ 560 (956)
-++|||+.+.++.|++.|+++.++||-....+..+.+++|+...... ..+++|.. + .
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~---------P--- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-G---------P--- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-C---------C---
Confidence 47899999999999999999999999999999999999998532110 01111110 0 0
Q ss_pred hcceEEeeChhhHHHHHHH-----Hh--hCCCEEEEEcCCccChhhhccC---CeeEEec--c-----ccHHHhhcccee
Q 002176 561 KADGFAGVFPEHKYEIVKR-----LQ--ARKHICGMTGDGVNDAPALKKA---DIGIAVA--D-----ATDAARSASDIV 623 (956)
Q Consensus 561 ~~~vfar~~Pe~K~~iV~~-----lq--~~g~~V~m~GDGvNDapALk~A---dVGIamg--~-----gtd~Ak~aADiv 623 (956)
-+....|.+.+.. +. .....|.|+|||.||++|-.-. +-=|.+| + --+.=+++=|||
T Consensus 187 ------~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Div 260 (277)
T TIGR01544 187 ------LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIV 260 (277)
T ss_pred ------cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEE
Confidence 0001345554432 22 2235688999999999996544 2233444 2 134456788999
Q ss_pred ecCCChhHHHHHHH
Q 002176 624 LTEPGLSVIISAVL 637 (956)
Q Consensus 624 L~~~~~~~iv~ai~ 637 (956)
|.+|.=-.++.+|.
T Consensus 261 l~~D~t~~v~~~il 274 (277)
T TIGR01544 261 LVQDETLEVANSIL 274 (277)
T ss_pred EECCCCchHHHHHH
Confidence 99997777776663
No 88
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.94 E-value=0.0038 Score=66.05 Aligned_cols=125 Identities=17% Similarity=0.158 Sum_probs=80.7
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.||+.+.++.|++.|+++.++|+-....+..+-+.+|+....+...++.+.+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~-----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA-----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC-----------------CCCCCH
Confidence 479999999999999999999999999999999998999985211112222221110 011122
Q ss_pred hhHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCeeE--Eecccc----HHHhhccceeecCCChhHHHH
Q 002176 571 EHKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIGI--AVADAT----DAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 571 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGI--amg~gt----d~Ak~aADivL~~~~~~~iv~ 634 (956)
+-=....+.+.-. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ ++++.+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2222333433333 357999999999999999999986 333322 12234577777 45665544
No 89
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=96.89 E-value=0.0022 Score=70.16 Aligned_cols=138 Identities=10% Similarity=0.080 Sum_probs=82.9
Q ss_pred CCCccHHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccc---cCC----cccc---------------
Q 002176 492 PPRHDSAETIRRALN-LGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSAL---LGQ----NKDE--------------- 548 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---~g~----~~~~--------------- 548 (956)
.+-+++.++|++|++ .|+.++++||..........+.+++.--..+...+ .+. ..+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999888887766642000000000 000 0000
Q ss_pred -------------------ccCc--ccHHHH----hhhcc--------eEEeeCh--hhHHHHHHHHhhC----CCEEEE
Q 002176 549 -------------------SIVA--LPVDEL----IEKAD--------GFAGVFP--EHKYEIVKRLQAR----KHICGM 589 (956)
Q Consensus 549 -------------------~~~~--~~~~~~----~~~~~--------vfar~~P--e~K~~iV~~lq~~----g~~V~m 589 (956)
.... ..+.++ .+... .+-.+.| .+|..-|+.+.+. +..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 001111 11111 1223344 3787777765543 356889
Q ss_pred EcCCccChhhhccC----CeeEEeccccHHHhhccceeecCCChhHHHHH
Q 002176 590 TGDGVNDAPALKKA----DIGIAVADATDAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 590 ~GDGvNDapALk~A----dVGIamg~gtd~Ak~aADivL~~~~~~~iv~a 635 (956)
+||+.||.+|++.+ +.||+||++. ..|++.|.+ ...+...
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~----~~A~~~l~~--~~~v~~~ 239 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGA----TQASWRLAG--VPDVWSW 239 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCC----CcCeEeCCC--HHHHHHH
Confidence 99999999999999 9999999765 356787754 4444333
No 90
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.89 E-value=0.004 Score=66.49 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+... -..++.+.+.. ...-.|+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~-----------------~~KP~p~ 155 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR--CAVLIGGDTLA-----------------ERKPHPL 155 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc--ccEEEecCcCC-----------------CCCCCHH
Confidence 6789999999999999999999999998888888888887432 11111111100 1122243
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eeccc----c-HHHhhccceeecCCChhHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADA----T-DAARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~g----t-d~Ak~aADivL~~~~~~~iv~a 635 (956)
-=..+.+.+.-....+.|+||+.||..|-++|++-. ++..| . ......+|+++ +++..+...
T Consensus 156 ~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 156 PLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 334566666655667999999999999999998873 34322 1 12234689988 556655543
No 91
>PRK11590 hypothetical protein; Provisional
Probab=96.82 E-value=0.0049 Score=64.99 Aligned_cols=106 Identities=13% Similarity=0.047 Sum_probs=75.1
Q ss_pred CCCccHHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE-EeeC
Q 002176 492 PPRHDSAETI-RRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF-AGVF 569 (956)
Q Consensus 492 ~lR~~~~~aI-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf-ar~~ 569 (956)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... ..+.+.+.+.... ..+. ..|.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~----~~~i~t~l~~~~t----------g~~~g~~c~ 160 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR----VNLIASQMQRRYG----------GWVLTLRCL 160 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc----CceEEEEEEEEEc----------cEECCccCC
Confidence 5589999999 578889999999999999999999999996210 0111211111000 0011 2366
Q ss_pred hhhHHHHHHHH-hhCCCEEEEEcCCccChhhhccCCeeEEecc
Q 002176 570 PEHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (956)
Q Consensus 570 Pe~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (956)
.++|.+-++.. .......-+=||..||.|+|+.|+-.++++.
T Consensus 161 g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 161 GHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred ChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 78999877754 3334455678999999999999999999974
No 92
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.77 E-value=0.008 Score=65.18 Aligned_cols=97 Identities=15% Similarity=0.114 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+|.||+.+.++.|++.|+++.++||.....+..+-+++|+.... ...++.+.+.. ...-.|+
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~-----------------~~KP~p~ 160 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP-----------------AGRPAPW 160 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC-----------------CCCCCHH
Confidence 56789999999999999999999999999999888888885321 11222221110 0111233
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCee
Q 002176 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-. .+.+.|+||..+|.-|=++|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCe
Confidence 323344444322 34589999999999999999975
No 93
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.75 E-value=0.005 Score=64.89 Aligned_cols=106 Identities=11% Similarity=0.033 Sum_probs=74.1
Q ss_pred CCCccHHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 492 PPRHDSAETIR-RALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++|++.++|+ .+++.|++++++|+=....+..+++..|+... ..++ +.+.+.. .+ .. . .=..|.-
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~-~g---g~----~-~g~~c~g 160 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERG-NG---GW----V-LPLRCLG 160 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEe-CC---ce----E-cCccCCC
Confidence 46899999996 78889999999999999999999998655221 0111 2211100 00 00 0 0124667
Q ss_pred hhHHHHHHHH-hhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002176 571 EHKYEIVKRL-QARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 571 e~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
++|.+-++.. .......-+=||..||.|||+.||-.+++.
T Consensus 161 ~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 161 HEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred hHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 8999877754 323345568899999999999999999996
No 94
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.67 E-value=0.014 Score=64.10 Aligned_cols=121 Identities=14% Similarity=0.103 Sum_probs=81.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... ..++.+.+. . ..|+
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F--~~vi~~~~~------------------~--~k~~ 199 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF--SVVQAGTPI------------------L--SKRR 199 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe--EEEEecCCC------------------C--CCHH
Confidence 57899999999999999999999999999999999999985321 111211110 0 0122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-eccc--c--HHHhhccceeecCCChhHHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADA--T--DAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~g--t--d~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=..+++.++-....++|+||+.+|..|-++|++-.. +..| + +.....+|+++ +++..+...+
T Consensus 200 ~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 200 ALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 2122333333334569999999999999999988633 3332 2 23344689988 6677776654
No 95
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.59 E-value=0.011 Score=64.42 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=79.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+.....+..+-+.+|+..- ...++.+.+.. ...-.|+
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~-----------------~~KP~Pe 169 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY-----------------RGKPDPE 169 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC-----------------CCCCCHH
Confidence 5689999999999999999999999999999998888998531 22233222211 0111232
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eec-cccHHHhhccceeecCCChhHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVA-DATDAARSASDIVLTEPGLSVI 632 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg-~gtd~Ak~aADivL~~~~~~~i 632 (956)
-=....+.+.-....+.|+||..+|..|-++|++-. ++. ..+......+|.++ ++++.+
T Consensus 170 ~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 170 MFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 223445555544566999999999999999999853 443 22222233578877 445544
No 96
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.57 E-value=0.015 Score=63.69 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=63.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-. ...++.+.+.. ...-.|+
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~-----------------~~KP~p~ 162 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP-----------------AGRPYPW 162 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC-----------------CCCCChH
Confidence 56789999999999999999999999998887777777764211 11122111100 0111222
Q ss_pred hHHHHHHHHhhC-CCEEEEEcCCccChhhhccCCee
Q 002176 572 HKYEIVKRLQAR-KHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-. ...+.|+||..+|..|-++|++-
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~ 198 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMW 198 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCE
Confidence 223333444322 24689999999999999999973
No 97
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.46 E-value=0.0041 Score=64.69 Aligned_cols=94 Identities=18% Similarity=0.080 Sum_probs=68.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (956)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- ...++.+.+ +..+-.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~~~~~~~------------------~~~KP~ 163 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL--FPVQIWMED------------------CPPKPN 163 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh--CCEEEeecC------------------CCCCcC
Confidence 455777889999999999999999999999999999999998521 111221111 111334
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccC
Q 002176 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~A 603 (956)
|+--..+.+.+.-....|.|+||+.+|+.|-++|
T Consensus 164 p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 164 PEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 5555666676666666799999999999887654
No 98
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.42 E-value=0.0074 Score=64.53 Aligned_cols=92 Identities=20% Similarity=0.244 Sum_probs=64.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.|.+++++.++.+++.|+++.++||. ...++..+.+..|++.+.+....+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 57788999999999999999999995 36799999998999532222222222110
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEe
Q 002176 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV 609 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iam 609 (956)
.-++|... +++.| .+.|+||..+|..|-++|++- |.+
T Consensus 173 -~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 173 -GQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGARGIRI 210 (237)
T ss_pred -CCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCCcEEEE
Confidence 01344443 34444 488999999999999999875 444
No 99
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.34 E-value=0.02 Score=62.04 Aligned_cols=116 Identities=13% Similarity=0.127 Sum_probs=79.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+-....+...-+++|+..- ...++.+.+.. ...-.|+
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~-----------------~~KP~p~ 168 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECE-----------------HAKPHPD 168 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCC-----------------CCCCChH
Confidence 5788999999999999999999999999999998899998532 12233222211 0122234
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-Eecccc---HHHhhccceeecC
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADAT---DAARSASDIVLTE 626 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gt---d~Ak~aADivL~~ 626 (956)
-=....+.+.-....+.|+||..+|..|=++|++-. ++..|. +.....+|+++.+
T Consensus 169 ~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 169 PYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 444555666555567999999999999999998853 333221 2223468888844
No 100
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=96.34 E-value=0.019 Score=69.37 Aligned_cols=48 Identities=8% Similarity=0.071 Sum_probs=39.2
Q ss_pred EEeccCCC-CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 485 GLMPLFDP-PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 485 Gli~~~D~-lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
|.+.-.|. .-+.+.++|++|+++||.+++.||....-+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 44443333 3457899999999999999999999999999999999974
No 101
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.32 E-value=0.025 Score=61.67 Aligned_cols=43 Identities=7% Similarity=-0.014 Sum_probs=38.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (956)
+..-+.+.++|++|++.||.+++.||-.......+.+++|+..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3456779999999999999999999999999999999999853
No 102
>PLN02382 probable sucrose-phosphatase
Probab=96.25 E-value=0.0055 Score=71.24 Aligned_cols=65 Identities=23% Similarity=0.214 Sum_probs=47.5
Q ss_pred hHHHHHHHHhhC----C---CEEEEEcCCccChhhhccCC-eeEEeccccHHHhhcc--------ceeecC-CChhHHHH
Q 002176 572 HKYEIVKRLQAR----K---HICGMTGDGVNDAPALKKAD-IGIAVADATDAARSAS--------DIVLTE-PGLSVIIS 634 (956)
Q Consensus 572 ~K~~iV~~lq~~----g---~~V~m~GDGvNDapALk~Ad-VGIamg~gtd~Ak~aA--------DivL~~-~~~~~iv~ 634 (956)
.|..-++.|.+. | ..|..+||+.||.+||+.|+ .||+|+++.+..|+.+ |++..+ .+-..|.+
T Consensus 175 sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~ 254 (413)
T PLN02382 175 GKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQ 254 (413)
T ss_pred CHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHH
Confidence 477777766554 2 37899999999999999999 6999999998888643 555443 33445555
Q ss_pred HH
Q 002176 635 AV 636 (956)
Q Consensus 635 ai 636 (956)
++
T Consensus 255 al 256 (413)
T PLN02382 255 AI 256 (413)
T ss_pred HH
Confidence 54
No 103
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.11 E-value=0.017 Score=68.31 Aligned_cols=123 Identities=11% Similarity=0.073 Sum_probs=82.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..- -..++.+.+.. ..-.|+
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~--f~~i~~~d~v~------------------~~~kP~ 389 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW--VTETFSIEQIN------------------SLNKSD 389 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh--cceeEecCCCC------------------CCCCcH
Confidence 7889999999999999999999999999999999999998531 11222221110 011233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecc--ccHHHhhccceeecCCChhHHHHHHHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVAD--ATDAARSASDIVLTEPGLSVIISAVLT 638 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~--gtd~Ak~aADivL~~~~~~~iv~ai~~ 638 (956)
-=....+.++ ...+.|+||..+|..|-++|++- |++.. +.+.....+|+++ ++++.+...+..
T Consensus 390 ~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 390 LVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 2222333332 34699999999999999999984 45532 2222234588888 567777766543
No 104
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.09 E-value=0.02 Score=59.75 Aligned_cols=39 Identities=31% Similarity=0.392 Sum_probs=35.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (956)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999998888754
No 105
>PRK11587 putative phosphatase; Provisional
Probab=96.08 E-value=0.024 Score=59.96 Aligned_cols=114 Identities=15% Similarity=0.153 Sum_probs=72.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. ...++.+.+.. ...-.|+
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~-----------------~~KP~p~ 142 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK-----------------RGKPEPD 142 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc-----------------CCCCCcH
Confidence 578999999999999999999999988776666556666631 11122111100 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEecccc-HHHhhccceeec
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADAT-DAARSASDIVLT 625 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~gt-d~Ak~aADivL~ 625 (956)
-=....+.+.-....+.|+||..+|..|-++|++- |++..+. +.....+|+++.
T Consensus 143 ~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 143 AYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 22334444444456799999999999999999985 5665332 223345777763
No 106
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.05 E-value=0.019 Score=60.56 Aligned_cols=99 Identities=18% Similarity=0.176 Sum_probs=66.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+-+...+...-+++|+..- -..++.+.+ ..+..|.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~-------------------~~~~KP~ 152 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF--FDAVITSEE-------------------EGVEKPH 152 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh--ccEEEEecc-------------------CCCCCCC
Confidence 5789999999999999999999999888777777788887421 111221111 1122232
Q ss_pred h--HHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCee-EEecc
Q 002176 572 H--KYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVAD 611 (956)
Q Consensus 572 ~--K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVG-Iamg~ 611 (956)
. =..+.+.+.-....+.|+||.. +|..+-++|++- |.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 153 PKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred HHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 2 2233344433345789999998 999999999874 55543
No 107
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.99 E-value=0.018 Score=64.08 Aligned_cols=109 Identities=13% Similarity=0.050 Sum_probs=77.0
Q ss_pred ccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 488 PLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 488 ~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
...+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..... ..+.|.+. ....+.... --+
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f--~~i~~~~~--------~~~~~~~~~-~~k 251 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWF--DDLIGRPP--------DMHFQREQG-DKR 251 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCch--hhhhCCcc--------hhhhcccCC-CCC
Confidence 3678999999999999999999999999999999999999998853111 11112110 000000000 023
Q ss_pred eChhhHHHHHHHHhh-CCCEEEEEcCCccChhhhccCCeeE
Q 002176 568 VFPEHKYEIVKRLQA-RKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
-.|+-+....+.+-. .-..+.|+||..||+-|-++|++-.
T Consensus 252 p~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 447777887776644 3368999999999999999999873
No 108
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=95.92 E-value=0.016 Score=62.13 Aligned_cols=92 Identities=20% Similarity=0.212 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGD----QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
.|.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... ...++.++... .
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~-------------------~ 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG-------------------Q 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC-------------------C
Confidence 34555999999999999999999997 66799999999999531 11222221110 0
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEe
Q 002176 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAV 609 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iam 609 (956)
-.| +|. ..+++.| ++.|+||..||..|-++|++- |++
T Consensus 173 ~Kp-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~~I~V 210 (237)
T TIGR01672 173 YQY-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCC-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCCEEEE
Confidence 112 232 2345555 478999999999999998764 444
No 109
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=95.88 E-value=0.068 Score=67.03 Aligned_cols=170 Identities=17% Similarity=0.181 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEec--cCCCCCccHHHHHHHHHh-CCCeEEEEcCCChHHHHH
Q 002176 448 HAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMP--LFDPPRHDSAETIRRALN-LGVNVKMITGDQLAIAKE 524 (956)
Q Consensus 448 ~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~--~~D~lR~~~~~aI~~l~~-aGI~v~miTGD~~~tA~~ 524 (956)
+...+.|...-.|.+++-+.. +++.... -...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 344556666667888877654 4433211 112367899999999999 699999999999988877
Q ss_pred HHHHhCCCCCCCCCcccc--CCcc------cc---------------------------c------cCcccH--------
Q 002176 525 TGRRLGMGTNMYPSSALL--GQNK------DE---------------------------S------IVALPV-------- 555 (956)
Q Consensus 525 ia~~lGi~~~~~~~~~l~--g~~~------~~---------------------------~------~~~~~~-------- 555 (956)
....+++.--..+...+. +... +. . ..+.++
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 655444310000000000 0000 00 0 000001
Q ss_pred HHHhhh----c--ce-----EEeeCh--hhHHHHHHHHhhC--CCEEEEEcCCccChhhhccC---CeeEEeccccHHHh
Q 002176 556 DELIEK----A--DG-----FAGVFP--EHKYEIVKRLQAR--KHICGMTGDGVNDAPALKKA---DIGIAVADATDAAR 617 (956)
Q Consensus 556 ~~~~~~----~--~v-----far~~P--e~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~A---dVGIamg~gtd~Ak 617 (956)
.+.+.. . .+ +-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 0 11 123334 4788888888764 24799999999999999987 588888874 4
Q ss_pred hccceeecCCChhHHHHHH
Q 002176 618 SASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 618 ~aADivL~~~~~~~iv~ai 636 (956)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 6788888654 4444433
No 110
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.82 E-value=0.05 Score=55.81 Aligned_cols=127 Identities=21% Similarity=0.125 Sum_probs=71.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChH---------------HHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---------------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~---------------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++.||+.+++++|++.|+++.++|..... ....+-++.|+.-+ .++....... .+
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~~----~~-- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHPE----DG-- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCCC----CC--
Confidence 46799999999999999999999987621 11112233444200 1110000000 00
Q ss_pred HHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-EeccccH---HHhhcc--ceeecCCChh
Q 002176 557 ELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATD---AARSAS--DIVLTEPGLS 630 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gtd---~Ak~aA--DivL~~~~~~ 630 (956)
.....-.|+--....+.+.-..+.+.|+||..+|..+-++|++-. .+..|.. .....+ |.++ +++.
T Consensus 99 ------~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~ 170 (181)
T PRK08942 99 ------CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLA 170 (181)
T ss_pred ------CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHH
Confidence 001122244334555555555567999999999999999999752 3333321 112235 7777 5566
Q ss_pred HHHHHH
Q 002176 631 VIISAV 636 (956)
Q Consensus 631 ~iv~ai 636 (956)
.+...+
T Consensus 171 el~~~l 176 (181)
T PRK08942 171 DLPQAL 176 (181)
T ss_pred HHHHHH
Confidence 666554
No 111
>PRK06769 hypothetical protein; Validated
Probab=95.74 E-value=0.034 Score=56.71 Aligned_cols=98 Identities=10% Similarity=0.028 Sum_probs=59.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcce
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLA--------IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADG 564 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~--------tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~v 564 (956)
+.||+++++++|++.|+++.++|+.... .....-+..|+..- +......+.+. -
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~-~~~~~~~~~~~-----------------~ 90 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI-YLCPHKHGDGC-----------------E 90 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE-EECcCCCCCCC-----------------C
Confidence 6899999999999999999999987631 12222334555210 00000000000 0
Q ss_pred EEeeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 565 FAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 565 far~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
...-.|+-=.++.+.+.-.-+.+.|+||..+|..|=++|++-..
T Consensus 91 ~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 91 CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 11222333345555555445679999999999999999988643
No 112
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.67 E-value=0.071 Score=54.97 Aligned_cols=145 Identities=21% Similarity=0.240 Sum_probs=94.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccc-------c------ccCcccHHHH
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKD-------E------SIVALPVDEL 558 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~-------~------~~~~~~~~~~ 558 (956)
.+-||+.++++.|++. ...+++|---.+-+.++|..+|++........+.-++.. + ..+..+-+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4568999999998754 456667777788899999999995322111111000000 0 0112223334
Q ss_pred hhhcc-eEEeeChhhHHHHHHHHhhC------------------CCEEEEEcCCccChhhhccCC--eeEEec-cccHHH
Q 002176 559 IEKAD-GFAGVFPEHKYEIVKRLQAR------------------KHICGMTGDGVNDAPALKKAD--IGIAVA-DATDAA 616 (956)
Q Consensus 559 ~~~~~-vfar~~Pe~K~~iV~~lq~~------------------g~~V~m~GDGvNDapALk~Ad--VGIamg-~gtd~A 616 (956)
.++.+ +|.|..|.+--+|++..+.- ....+.+||.+.|..||+.+. =|+|++ +|.+-|
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeYa 241 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEYA 241 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCccc
Confidence 44433 68888887655555444332 234678999999999999875 247777 888888
Q ss_pred hhccceeecCCChhHHHHHHH
Q 002176 617 RSASDIVLTEPGLSVIISAVL 637 (956)
Q Consensus 617 k~aADivL~~~~~~~iv~ai~ 637 (956)
..-||+.+..++.......|+
T Consensus 242 l~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 242 LKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccceEEeccchhhhhHHHH
Confidence 889999999999888777774
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.63 E-value=0.032 Score=57.98 Aligned_cols=94 Identities=15% Similarity=0.155 Sum_probs=65.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.+++++|++.|+++.++|+-+......+.+++|+... ...++...+. ....|.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~-------------------~~~KP~ 150 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FDAVLSADAV-------------------RAYKPA 150 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh--hheeEehhhc-------------------CCCCCC
Confidence 5789999999999999999999999888888888888887421 1112211110 111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
.. ..+.+.+.-....+.|+||+.+|..+-++|++-
T Consensus 151 ~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 151 PQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 21 334444444445689999999999998888775
No 114
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.62 E-value=0.036 Score=53.52 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=62.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcc
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQ--------LAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 563 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 563 (956)
++.|++.++++.|++.|+++.++|+.. ......+.+++|+.... ....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~------------------ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H------------------ 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C------------------
Confidence 678999999999999999999999988 67777888888874210 00100 0
Q ss_pred eEEeeChhhHHHHHHHHh-hCCCEEEEEcC-CccChhhhccCCe
Q 002176 564 GFAGVFPEHKYEIVKRLQ-ARKHICGMTGD-GVNDAPALKKADI 605 (956)
Q Consensus 564 vfar~~Pe~K~~iV~~lq-~~g~~V~m~GD-GvNDapALk~AdV 605 (956)
+..-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++
T Consensus 83 -~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 83 -CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred -CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 01111222234555552 44567999999 5899999988875
No 115
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=95.58 E-value=0.073 Score=60.78 Aligned_cols=120 Identities=17% Similarity=0.136 Sum_probs=81.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.+.++.|++.|+++.++|+-....+..+-+..||..- ...++.+.+.. ...-.|+
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~-----------------~~KP~Pe 276 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY-----------------RGKPDPE 276 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC-----------------CCCCCHH
Confidence 4779999999999999999999999999999999899998531 12222221110 0111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE-EeccccHHHh-hccceeecCCChhHH
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI-AVADATDAAR-SASDIVLTEPGLSVI 632 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-amg~gtd~Ak-~aADivL~~~~~~~i 632 (956)
-=....+.+.-....+.|+||..+|+.|-+.|++-. ++..+.+... ..+|+++ +++..+
T Consensus 277 ifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 277 MFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 334455556555677999999999999999999863 3344332222 3588887 456554
No 116
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=95.31 E-value=0.025 Score=57.82 Aligned_cols=94 Identities=12% Similarity=0.021 Sum_probs=59.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.++++.|++.|+++.++|+... +...-+++|+... -..++.+.+.. ..+-.|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~--f~~~~~~~~~~-----------------~~kp~p~ 145 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY--FDAIVDPAEIK-----------------KGKPDPE 145 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh--CcEEEehhhcC-----------------CCCCChH
Confidence 6789999999999999999999997532 3456677777422 11122111100 1111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=....+.+.-....+.|+||..+|+.|-++|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 22233333333334689999999999999999874
No 117
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.29 E-value=0.017 Score=57.88 Aligned_cols=97 Identities=18% Similarity=0.201 Sum_probs=69.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.+.++.|++.|++++++|+-.........+++|+.. +...++...+.. ...-.|
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~--~f~~i~~~~~~~-----------------~~Kp~~ 136 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD--YFDEIISSDDVG-----------------SRKPDP 136 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG--GCSEEEEGGGSS-----------------SSTTSH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc--ccccccccchhh-----------------hhhhHH
Confidence 4688999999999999999999999999999999999999852 122222221111 011112
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
+-=..+.+.+.-..+.+.|+||..+|.-+-++|++-
T Consensus 137 ~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 137 DAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 222455566655567799999999999999988764
No 118
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=95.28 E-value=0.056 Score=57.01 Aligned_cols=119 Identities=11% Similarity=0.084 Sum_probs=75.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++. +++.++|+-....+..+-+++|+..- -..++.+.+. ....|+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~--fd~i~~~~~~-------------------~~~KP~ 154 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF--FDDIFVSEDA-------------------GIQKPD 154 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh--cCEEEEcCcc-------------------CCCCCC
Confidence 5789999999999999 99999999988888888888888532 1112211110 011232
Q ss_pred hH--HHHHHHH-hhCCCEEEEEcCCc-cChhhhccCCee-EEec--cccHHHhhccceeecCCChhHHHH
Q 002176 572 HK--YEIVKRL-QARKHICGMTGDGV-NDAPALKKADIG-IAVA--DATDAARSASDIVLTEPGLSVIIS 634 (956)
Q Consensus 572 ~K--~~iV~~l-q~~g~~V~m~GDGv-NDapALk~AdVG-Iamg--~gtd~Ak~aADivL~~~~~~~iv~ 634 (956)
.. ....+.+ .-....+.|+||.. +|..+=+++++- |.+. ..+......+|.++ ++++.+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 21 3334444 32345689999998 899999999973 4443 22222223566666 44555543
No 119
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.25 E-value=0.065 Score=59.34 Aligned_cols=120 Identities=18% Similarity=0.126 Sum_probs=72.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCC-ccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS-SALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.+.++.|++.|+++.++|+-+......+-+..+... .... ..+.+.+.. ...-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~-----------------~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDVP-----------------KKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEeccccC-----------------CCCCCH
Confidence 578999999999999999999999988776665555443211 0000 111111000 011123
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE-ecccc--HHHhhccceeecCCChhH
Q 002176 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA-VADAT--DAARSASDIVLTEPGLSV 631 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-mg~gt--d~Ak~aADivL~~~~~~~ 631 (956)
+-=..+.+.+.-....+.|+||+.+|..|-++|++... +..|. .-....+|+++ +++..
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi--~~~~~ 267 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF--DCLGD 267 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE--CChhh
Confidence 33344555555445679999999999999999998744 32332 11123578887 44443
No 120
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.18 E-value=0.043 Score=54.92 Aligned_cols=111 Identities=14% Similarity=0.057 Sum_probs=67.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
.++|+-++.++.+++.+|+++++|+--.-.-..+=.+++=....+...+.. .+.. ....-.-.++... ....-.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~s-n~~~--ih~dg~h~i~~~~---ds~fG~ 146 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVS-NNDY--IHIDGQHSIKYTD---DSQFGH 146 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEee-cCce--EcCCCceeeecCC---ccccCC
Confidence 578999999999999999999998876555554444443111000000000 0000 0000000000000 122236
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+|...|+.|++..+.+-|+|||+.|..|-|.+|+=.|
T Consensus 147 dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 147 DKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 8999999999999999999999999988777666544
No 121
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.03 E-value=0.06 Score=57.31 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=66.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh-
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P- 570 (956)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+..- ...++.+.+ +.+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~-------------------~~~~KP~ 151 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHT-------------------FGYPKED 151 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeee-------------------CCCCCCC
Confidence 6789999999999999999999999888887777677777421 111221111 111122
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee--EEecc
Q 002176 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVAD 611 (956)
Q Consensus 571 -e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~ 611 (956)
+-=....+.+.-....+.|+||..+|+.|-++|++. +++.+
T Consensus 152 p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 152 QRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 222233344443445699999999999999999996 45543
No 122
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.92 E-value=0.076 Score=53.95 Aligned_cols=94 Identities=14% Similarity=0.127 Sum_probs=62.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... ...++.+.+.. ...-.|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~-----------------~~KP~~~ 144 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG-----------------RGKPDPD 144 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC-----------------CCCCCHH
Confidence 678999999999999999999999988776 555555787421 11122111100 1111233
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADI 605 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV 605 (956)
-=..+.+.+.-....+.|+||...|..|-++|++
T Consensus 145 ~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 145 IYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 3344455555455679999999999998888876
No 123
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.69 E-value=0.047 Score=55.75 Aligned_cols=92 Identities=13% Similarity=0.104 Sum_probs=59.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|++.|+++.++|+- ..+..+-+++|+..- ...++.+.+ ..+..|.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~--f~~v~~~~~-------------------~~~~kp~ 144 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY--FDAIVDADE-------------------VKEGKPH 144 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH--CCEeeehhh-------------------CCCCCCC
Confidence 78999999999999999999999986 556666777887421 111111110 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
.. ....+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 21 223333333345688999999999999998874
No 124
>PRK09449 dUMP phosphatase; Provisional
Probab=94.41 E-value=0.15 Score=53.87 Aligned_cols=121 Identities=14% Similarity=0.114 Sum_probs=74.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.|+ .|+++.++|......+...-+++|+..- -..++.+.+. ....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~-------------------~~~KP~ 152 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY--FDLLVISEQV-------------------GVAKPD 152 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH--cCEEEEECcc-------------------CCCCCC
Confidence 47899999999999 6899999999888888777777887421 1112211110 011232
Q ss_pred --hHHHHHHHHhhC-CCEEEEEcCCc-cChhhhccCCee-EEec-cccH-HHhhccceeecCCChhHHHHHH
Q 002176 572 --HKYEIVKRLQAR-KHICGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 --~K~~iV~~lq~~-g~~V~m~GDGv-NDapALk~AdVG-Iamg-~gtd-~Ak~aADivL~~~~~~~iv~ai 636 (956)
-=..+++.+.-. ...+.|+||.. +|..+=++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 153 p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 153 VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 213334444322 24699999998 799999999985 4444 2221 1112467777 5566665543
No 125
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.29 E-value=0.14 Score=55.33 Aligned_cols=45 Identities=27% Similarity=0.320 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhhC-C---CEEEEEcCCccChhhhccCCeeEEeccccHH
Q 002176 571 EHKYEIVKRLQAR-K---HICGMTGDGVNDAPALKKADIGIAVADATDA 615 (956)
Q Consensus 571 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIamg~gtd~ 615 (956)
..|..-|+.|+++ | +.|..+||..||.+||..++-||.++++.+.
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e 212 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPE 212 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHH
Confidence 5688888888775 2 3466789999999999999999999987766
No 126
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.24 E-value=0.11 Score=52.92 Aligned_cols=110 Identities=8% Similarity=-0.041 Sum_probs=68.7
Q ss_pred EEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhc
Q 002176 484 IGLMPLFDPPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (956)
Q Consensus 484 lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 562 (956)
.....-+-++.||+.+.++.|++.|+++.++|+- ....+..+-..+|+..... ...+..... .
T Consensus 37 ~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~---------------~~~~~~~Fd-~ 100 (174)
T TIGR01685 37 IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK---------------TVPMHSLFD-D 100 (174)
T ss_pred EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC---------------cccHHHhce-e
Confidence 3334444578899999999999999999999965 8888888888888741000 000000000 0
Q ss_pred ceEEeeChhhH--HHHHHHHhhC------CCEEEEEcCCccChhhhccCCeeEEe
Q 002176 563 DGFAGVFPEHK--YEIVKRLQAR------KHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 563 ~vfar~~Pe~K--~~iV~~lq~~------g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
.+.+.-.+..| ..+.+.+.+. -..+.|+||...|+.|-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111112 2345555433 35699999999999999988886544
No 127
>PLN02940 riboflavin kinase
Probab=94.19 E-value=0.13 Score=59.39 Aligned_cols=114 Identities=20% Similarity=0.172 Sum_probs=72.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR-RLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+... -..++.+.+.. ...-.|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v~-----------------~~KP~p 153 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEVE-----------------KGKPSP 153 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhcC-----------------CCCCCH
Confidence 467999999999999999999999998877766554 5676321 11122111100 011122
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc--cHHHhhccceee
Q 002176 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA--TDAARSASDIVL 624 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g--td~Ak~aADivL 624 (956)
+-=.++.+.+.-..+.|.|+||..+|..|-++|++. |++..+ .+.....+|.++
T Consensus 154 ~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 154 DIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222344455544456799999999999999999987 344432 232334466665
No 128
>PTZ00174 phosphomannomutase; Provisional
Probab=94.12 E-value=0.036 Score=59.90 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.8
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccChhhhccC-CeeEEeccccHHHhhccceee
Q 002176 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKKA-DIGIAVADATDAARSASDIVL 624 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~A-dVGIamg~gtd~Ak~aADivL 624 (956)
-+|..-++.|.+...-|+++|| |-||.+||+.| -.|+++++++|..|..+.+++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 5799888888877788999999 99999999987 788999999999998776554
No 129
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.09 E-value=0.093 Score=51.88 Aligned_cols=97 Identities=19% Similarity=0.161 Sum_probs=59.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++.|++.++++.|++.|+++.++|.... .....+.+.+|+....... ...+...+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~~~~~~--------- 96 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLF-CPHHPADN--------- 96 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEE-CCCCCCCC---------
Confidence 4789999999999999999999998652 3455666777774110000 00000000
Q ss_pred HHhhhcceEEeeChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
...+ .|+-+ ..+.+.+.-..+.|.|+||...|..+-+.|++-
T Consensus 97 -------~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 97 -------CSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -------CCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 0001 23222 233333333345699999999999998888764
No 130
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.99 E-value=0.28 Score=49.84 Aligned_cols=108 Identities=12% Similarity=0.142 Sum_probs=71.2
Q ss_pred HHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHhCCC
Q 002176 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ-LAIAKETGRRLGMG 532 (956)
Q Consensus 454 ~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 532 (956)
+.+.|.+.+.+-... ++.- .=...+-|++.++++.|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~--~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVY--PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------cccc--CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 456788888776532 1110 0123578999999999999999999999987 57777777887763
Q ss_pred CCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh--HHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCee
Q 002176 533 TNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH--KYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG 606 (956)
Q Consensus 533 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~--K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVG 606 (956)
.. .+ ...|.. =..+.+.+.-....+.|+||.. .|..+=++|++-
T Consensus 85 ~~-------~~-----------------------~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-------PH-----------------------AVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-------cC-----------------------CCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 10 00 012211 1223333333345699999998 799999999874
No 131
>PLN02580 trehalose-phosphatase
Probab=93.94 E-value=0.48 Score=54.20 Aligned_cols=67 Identities=22% Similarity=0.207 Sum_probs=47.4
Q ss_pred EeeChh---hHHHHHHHHhhC-C-----C-EEEEEcCCccChhhhcc-----CCeeEEeccccHHHhhccceeecCCChh
Q 002176 566 AGVFPE---HKYEIVKRLQAR-K-----H-ICGMTGDGVNDAPALKK-----ADIGIAVADATDAARSASDIVLTEPGLS 630 (956)
Q Consensus 566 ar~~Pe---~K~~iV~~lq~~-g-----~-~V~m~GDGvNDapALk~-----AdVGIamg~gtd~Ak~aADivL~~~~~~ 630 (956)
-.+.|. +|..-|+.+.+. | . .+.++||+.||-.|++. +++||+|++|.+.. .|++.|-+ -.
T Consensus 292 lEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~ 367 (384)
T PLN02580 292 LEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PS 367 (384)
T ss_pred EEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HH
Confidence 355664 898888877653 2 1 25899999999999996 68999999765433 57888844 45
Q ss_pred HHHHHH
Q 002176 631 VIISAV 636 (956)
Q Consensus 631 ~iv~ai 636 (956)
.+...+
T Consensus 368 eV~~~L 373 (384)
T PLN02580 368 EVMEFL 373 (384)
T ss_pred HHHHHH
Confidence 554444
No 132
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=93.77 E-value=0.33 Score=48.66 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=65.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHh---C--CCCCCCCCccccCCccccccCcccHHHHhhh
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK---ETGRRL---G--MGTNMYPSSALLGQNKDESIVALPVDELIEK 561 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 561 (956)
+|.+.++++++++++++.|+++..+||.....+. ..-.++ | ++. ..++.... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g-------~~~~~-~~~ 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPD-------RLFAA-LHR 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCC-------cchhh-hhc
Confidence 4778999999999999999999999999987764 444442 2 321 11111000 00000 000
Q ss_pred cceEEeeCh-hhHHHHHHHHhh-----CCCEEEEEcCCccChhhhccCCe
Q 002176 562 ADGFAGVFP-EHKYEIVKRLQA-----RKHICGMTGDGVNDAPALKKADI 605 (956)
Q Consensus 562 ~~vfar~~P-e~K~~iV~~lq~-----~g~~V~m~GDGvNDapALk~AdV 605 (956)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.|-++++|
T Consensus 93 -e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 -EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 2234 348888887776 45678889999999999987665
No 133
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=93.77 E-value=0.26 Score=50.22 Aligned_cols=124 Identities=16% Similarity=0.129 Sum_probs=65.6
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHhCCCCCC-CCCc-cccCCccccccCcccH
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQL---------------AIAKETGRRLGMGTNM-YPSS-ALLGQNKDESIVALPV 555 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~-~~~~-~l~g~~~~~~~~~~~~ 555 (956)
+.|++.+++++|++.|+++.++|.-.. .....+-.+.|+.-+. +... ...|. + ++
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~--~------~~ 98 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGV--E------EF 98 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCccc--c------cc
Confidence 578999999999999999999997653 1111222233332100 0000 00000 0 00
Q ss_pred HHHhhhcceEEeeChh--hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee--EEecccc---HHHhhccceeecCCC
Q 002176 556 DELIEKADGFAGVFPE--HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG--IAVADAT---DAARSASDIVLTEPG 628 (956)
Q Consensus 556 ~~~~~~~~vfar~~Pe--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iamg~gt---d~Ak~aADivL~~~~ 628 (956)
. +-.....|. -=....+.+.-....+.|+||..+|..|-++|++. |.+..|. ......+|+++ ++
T Consensus 99 ~------~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~ 170 (176)
T TIGR00213 99 R------QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NS 170 (176)
T ss_pred c------CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--cc
Confidence 0 000111232 22233333333345688999999999999999985 3444332 12223488888 44
Q ss_pred hhHH
Q 002176 629 LSVI 632 (956)
Q Consensus 629 ~~~i 632 (956)
+..+
T Consensus 171 ~~el 174 (176)
T TIGR00213 171 LADL 174 (176)
T ss_pred HHHh
Confidence 5443
No 134
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.63 E-value=0.57 Score=46.65 Aligned_cols=110 Identities=12% Similarity=0.182 Sum_probs=77.3
Q ss_pred HHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC
Q 002176 451 IDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG 530 (956)
Q Consensus 451 i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG 530 (956)
.+.+..+|++.+.+-..+ +++..= ....-|++.+=+++++.+|+++.++|--++.-+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 567889999999876543 333221 12355788889999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhC---CCEEEEEcCCc-cChhhhccCCee
Q 002176 531 MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR---KHICGMTGDGV-NDAPALKKADIG 606 (956)
Q Consensus 531 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~---g~~V~m~GDGv-NDapALk~AdVG 606 (956)
++.- +--..|-- ..+-+++++. -+-|+|+||-. .|+-+=+.|++=
T Consensus 85 v~fi------------------------------~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 85 VPFI------------------------------YRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred Ccee------------------------------ecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcE
Confidence 8520 11112222 3456666665 45799999986 587776666543
No 135
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.09 E-value=0.2 Score=52.09 Aligned_cols=94 Identities=14% Similarity=0.056 Sum_probs=57.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+... ...++...+.. ...-.|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~--fd~i~~s~~~~-----------------~~KP~~~ 164 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY--FDFVVTSYEVG-----------------AEKPDPK 164 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh--cceEEeecccC-----------------CCCCCHH
Confidence 57799999999999999999999975544 4566677777321 11111111100 0111121
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCe
Q 002176 572 HKYEIVKRLQARKHICGMTGDGV-NDAPALKKADI 605 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV 605 (956)
-=..+.+.+.-....+.|+||.. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 11223344433446799999997 89988888765
No 136
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=92.82 E-value=0.14 Score=50.74 Aligned_cols=91 Identities=21% Similarity=0.214 Sum_probs=57.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+..+++.+.++.|++.|+++.++|+-....+...-+.. +... ...++ +.+ ++...-.|+
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~-~~~-----------------~~~~Kp~~~ 122 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLIL-GSD-----------------EFGAKPEPE 122 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEE-ecC-----------------CCCCCcCHH
Confidence 34479999999999999999999999988888777764 3211 11111 100 011111222
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCC
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKAD 604 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 604 (956)
-=..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 2233334443334 7899999999998877663
No 137
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.78 E-value=0.37 Score=51.46 Aligned_cols=103 Identities=22% Similarity=0.228 Sum_probs=67.7
Q ss_pred CCCccHHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCC-cccc--ccCcccHHHHhhhcceEE
Q 002176 492 PPRHDSAETIRRA--LNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFA 566 (956)
Q Consensus 492 ~lR~~~~~aI~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~--~~~~~~~~~~~~~~~vfa 566 (956)
|+.|+.++.++.+ ++.|+.++++|--|.---..+=+.-|+... -+.+.+.. ..+. .+.-.+... +-|.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~--f~~I~TNpa~~~~~G~l~v~pyh~-----h~C~ 143 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC--FSEIFTNPACFDADGRLRVRPYHS-----HGCS 143 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc--cceEEeCCceecCCceEEEeCccC-----CCCC
Confidence 7788999999999 568999999999998777777778787421 11112111 0000 000001110 2345
Q ss_pred eeCh-hhHHHHHHHHhhC----C---CEEEEEcCCccCh-hhhc
Q 002176 567 GVFP-EHKYEIVKRLQAR----K---HICGMTGDGVNDA-PALK 601 (956)
Q Consensus 567 r~~P-e~K~~iV~~lq~~----g---~~V~m~GDGvNDa-pALk 601 (956)
++.| --|..+++.+++. | ..|.++|||.||- |+++
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~ 187 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALR 187 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccc
Confidence 6655 4799999988875 4 6899999999995 5554
No 138
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=92.68 E-value=0.17 Score=50.14 Aligned_cols=94 Identities=17% Similarity=0.025 Sum_probs=64.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
-++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+.+. .+..|
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~-------------------~~~KP 102 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDEC-------------------VFVKG 102 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECccc-------------------cccCC
Confidence 367999999999998 5799999999999999999998887421 11222222111 11123
Q ss_pred hhHHHHHHHHh---hCCCEEEEEcCCccChhhhccCCeeEEe
Q 002176 571 EHKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 571 e~K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGIam 609 (956)
. +.+.++ .....|.|+||..+|..|-++|.|-|..
T Consensus 103 ~----~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 103 K----YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred e----EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecC
Confidence 2 333333 3456799999999999998888665543
No 139
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=92.68 E-value=0.46 Score=51.83 Aligned_cols=86 Identities=14% Similarity=0.096 Sum_probs=57.1
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
..++-|++.+.++.+++.|+++.++|+-... .....-++.|+..... . .++.
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-d------------------------~lll 170 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-E------------------------HLLL 170 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-c------------------------eEEe
Confidence 3567899999999999999999999997643 3334446678753211 1 1122
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhh
Q 002176 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPAL 600 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapAL 600 (956)
|-....|..-.+.+.+.-.+++|+||-.+|....
T Consensus 171 r~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 171 KKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 2111235555556655556899999999997654
No 140
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.37 E-value=1.1 Score=48.23 Aligned_cols=94 Identities=17% Similarity=0.211 Sum_probs=59.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhc
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAK--ETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 562 (956)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. +.-+++|+..+. ...++..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s------------------- 76 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISS------------------- 76 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEcc-------------------
Confidence 555556788999999999999999999999985544333 455777875211 1111110
Q ss_pred ceEEeeChhhHHHHHHHHhh---CCCEEEEEcCCccChhhhccCC
Q 002176 563 DGFAGVFPEHKYEIVKRLQA---RKHICGMTGDGVNDAPALKKAD 604 (956)
Q Consensus 563 ~vfar~~Pe~K~~iV~~lq~---~g~~V~m~GDGvNDapALk~Ad 604 (956)
.. ....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 77 ----~~--~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 77 ----GE--IAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ----HH--HHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 00 001122222232 2467999999999998886543
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=91.95 E-value=0.26 Score=49.64 Aligned_cols=99 Identities=14% Similarity=0.050 Sum_probs=58.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHH
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVD 556 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 556 (956)
++-|++.+++++|++.|+++.++|-- .......+-+.+|+.- . ..+.+.... ..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d-~ii~~~~~~----~~--- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---D-DVLICPHFP----DD--- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---e-EEEECCCCC----CC---
Confidence 46789999999999999999999974 2335566667777741 1 111110000 00
Q ss_pred HHhhhcceEEeeChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 557 ELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 557 ~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
+ +....|... ..+++.+.-....+.|+||+.+|..+-++|++-..
T Consensus 98 ------~-~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 98 ------N-CDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred ------C-CCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 0 001123211 12223322223458999999999999999888643
No 142
>PLN02811 hydrolase
Probab=91.76 E-value=0.33 Score=51.35 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=58.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHH-HHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAK-ETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~-~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.||+.+.|+.|++.|+++.++||-...... ..-+..|+.. +...++.+.+.+ +.+..|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~--~f~~i~~~~~~~-----------------~~~~KP 138 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS--LMHHVVTGDDPE-----------------VKQGKP 138 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh--hCCEEEECChhh-----------------ccCCCC
Confidence 57899999999999999999999998764332 2222223321 111112111000 111122
Q ss_pred h--hHHHHHHHHh---hCCCEEEEEcCCccChhhhccCCeeE
Q 002176 571 E--HKYEIVKRLQ---ARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 571 e--~K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+ -=...++.+. -..+-|.|+||...|+.|-++|++-.
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeE
Confidence 2 2233344443 22356999999999999999999863
No 143
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=91.46 E-value=0.81 Score=48.65 Aligned_cols=87 Identities=20% Similarity=0.271 Sum_probs=55.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
-|+-|++.+.++.+++.|++|+++||........+ =++.|+.. +....+.+.+.. ..
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~------------------~~ 178 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS------------------NK 178 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC------------------Cc
Confidence 48889999999999999999999999986542222 23456642 111122111000 00
Q ss_pred eChhhHHHHHHHHhhCCC-EEEEEcCCccCh
Q 002176 568 VFPEHKYEIVKRLQARKH-ICGMTGDGVNDA 597 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDa 597 (956)
-.-+-|.+.=+.+.+.|+ +++.+||-.+|.
T Consensus 179 ~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 179 TVVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred hHhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 011227777777777766 788999999986
No 144
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=91.11 E-value=0.4 Score=54.46 Aligned_cols=99 Identities=12% Similarity=0.030 Sum_probs=58.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccH
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGD---------------QLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPV 555 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 555 (956)
-+|.|++.+++++|++.|+++.++|.= ....+..+.+..|+.. ...+.+..... .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f----d~i~i~~~~~s----d-- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF----DEVLICPHFPE----D-- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce----eeEEEeCCcCc----c--
Confidence 368899999999999999999999982 1234555666666631 11111100000 0
Q ss_pred HHHhhhcceEEeeChhhH--HHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002176 556 DELIEKADGFAGVFPEHK--YEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 556 ~~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+..+| .|+.. ..+.+.+.-....+.|+||+.+|..+-+.|++-.
T Consensus 99 -------~~~~r-KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 99 -------NCSCR-KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred -------cCCCC-CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 00111 23222 1222222223367999999999999988888753
No 145
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=90.65 E-value=0.65 Score=44.79 Aligned_cols=39 Identities=8% Similarity=0.050 Sum_probs=34.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHhC
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGD-QLAIAKETGRRLG 530 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 530 (956)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777666666
No 146
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=90.63 E-value=0.36 Score=52.03 Aligned_cols=64 Identities=22% Similarity=0.229 Sum_probs=45.6
Q ss_pred ChhhHHHHHHHHhhC----CCEEEEEcCCccChhhhccC--------CeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002176 569 FPEHKYEIVKRLQAR----KHICGMTGDGVNDAPALKKA--------DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A--------dVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
.+.+|...++.+.++ ...+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+...+
T Consensus 164 ~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 164 RFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHHHH
Confidence 355787777666543 34789999999999999999 4788886443 4567899884 455555444
No 147
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=90.15 E-value=1.4 Score=45.29 Aligned_cols=50 Identities=22% Similarity=0.355 Sum_probs=42.0
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHH---HhCC
Q 002176 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGR---RLGM 531 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~---~lGi 531 (956)
.+-|.+.++|..-|++.|++++|++++.+|+.+|.-..+.-..+.+ +||+
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 5679999999999999999999999999999999877666555554 4565
No 148
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.75 E-value=0.81 Score=46.30 Aligned_cols=40 Identities=8% Similarity=0.029 Sum_probs=31.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHhCCC
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (956)
+-||+.++++.|++.|+++.++|.-.. .....+-+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999996543 2345666777874
No 149
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=89.53 E-value=1.4 Score=57.52 Aligned_cols=115 Identities=16% Similarity=0.177 Sum_probs=77.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh-
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP- 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P- 570 (956)
.+.||+.+.++.|+++|+++.++|+-....+..+-+++|+.... ...++.+.+ +.+..|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~-Fd~iv~~~~-------------------~~~~KP~ 220 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM-FDAIVSADA-------------------FENLKPA 220 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH-CCEEEECcc-------------------cccCCCC
Confidence 36789999999999999999999999888888888888884211 112222111 112223
Q ss_pred -hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee-EEeccc---cHHHhhccceeecC
Q 002176 571 -EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG-IAVADA---TDAARSASDIVLTE 626 (956)
Q Consensus 571 -e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iamg~g---td~Ak~aADivL~~ 626 (956)
+-=.+..+.+.-....+.|+||..+|+.|-++|++= |++..+ .+.....+|+++-+
T Consensus 221 Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~ 281 (1057)
T PLN02919 221 PDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD 281 (1057)
T ss_pred HHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC
Confidence 222344555554556799999999999999999984 445432 23344567888844
No 150
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=89.33 E-value=0.7 Score=49.02 Aligned_cols=98 Identities=14% Similarity=0.064 Sum_probs=63.4
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhC---CCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLG---MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
.-++.||+.+++++|++.|+++.++|..+....+.+-+..+ +..- -...+ + ..+..
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~--f~~~f-----d--------------~~~g~ 151 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY--FSGYF-----D--------------TTVGL 151 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh--cceEE-----E--------------eCccc
Confidence 34799999999999999999999999988776665544442 2100 00000 0 00111
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
.-.|+-=..+.+.+.-....+.|+||...|+.|-++|++-..
T Consensus 152 KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 152 KTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred CCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 112222244555555444679999999999999999998644
No 151
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=88.96 E-value=0.38 Score=50.81 Aligned_cols=96 Identities=11% Similarity=0.159 Sum_probs=61.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++.| ++++.++|+.....+...=++.|+.... ...++.+.+... ..-.|+
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~~-----------------~KP~p~ 146 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQR-----------------WKPDPA 146 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcCC-----------------CCCChH
Confidence 5668999999988 4899999999888777776777774321 111222211100 011122
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEE
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIA 608 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 608 (956)
-=....+.+.-....|+|+||..+|..+=++|++-..
T Consensus 147 ~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 147 LMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred HHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 2233344443334568999999999999999998764
No 152
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=88.09 E-value=0.49 Score=49.58 Aligned_cols=97 Identities=14% Similarity=0.036 Sum_probs=56.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI--AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
-++.|++.+.++.|++.|+++.++|...... ........|+... -..++...+. ....-
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~-----------------~~~KP 153 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL--FDAVVESCLE-----------------GLRKP 153 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh--CCEEEEeeec-----------------CCCCC
Confidence 3678999999999999999999999865432 2222222333210 0011100000 00111
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 569 FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
.|+-=..+.+.+.-....+.|+||...|+.+=++|++-
T Consensus 154 ~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 154 DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 12222333444443445689999999999999998885
No 153
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=87.90 E-value=2.6 Score=53.69 Aligned_cols=67 Identities=9% Similarity=0.143 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHH-HhCCCeEEEEcCCChHHHHHHHH
Q 002176 449 AIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRA-LNLGVNVKMITGDQLAIAKETGR 527 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~ia~ 527 (956)
..++.|.....|.+++-|.. +++-.....-.|-+++.+++++| ++.|+.|.++||....+....-.
T Consensus 586 ~i~~~y~~~~~rlI~LDyDG-------------TLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~ 652 (854)
T PLN02205 586 HIVSAYKRTTTRAILLDYDG-------------TLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFS 652 (854)
T ss_pred HHHHHHHhhcCeEEEEecCC-------------cccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhC
Confidence 34455666666777766643 33322122235668999999997 78899999999999988776654
Q ss_pred H
Q 002176 528 R 528 (956)
Q Consensus 528 ~ 528 (956)
.
T Consensus 653 ~ 653 (854)
T PLN02205 653 P 653 (854)
T ss_pred C
Confidence 3
No 154
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.60 E-value=2.8 Score=43.59 Aligned_cols=37 Identities=19% Similarity=0.172 Sum_probs=32.7
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.+.+.+.+|+++|++|+.+|.-...--...-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4678999999999999999999888888888888875
No 155
>PLN03017 trehalose-phosphatase
Probab=87.03 E-value=9.3 Score=43.55 Aligned_cols=44 Identities=9% Similarity=0.007 Sum_probs=34.1
Q ss_pred eEEEEeccCC--CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 002176 482 QFIGLMPLFD--PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG 526 (956)
Q Consensus 482 ~~lGli~~~D--~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia 526 (956)
+|+-++.-.| .+-++..++|++|. .|+.+.++||.......+..
T Consensus 121 TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 121 TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 5554443223 36789999999999 78999999999999888773
No 156
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=86.78 E-value=2.2 Score=43.20 Aligned_cols=102 Identities=18% Similarity=0.204 Sum_probs=72.2
Q ss_pred HHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC--eEEEEcCC-------ChHHHHH
Q 002176 454 FAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV--NVKMITGD-------QLAIAKE 524 (956)
Q Consensus 454 ~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI--~v~miTGD-------~~~tA~~ 524 (956)
+.+.|.|.+.+-... ++ ...=++.+-|+..+.+++|++.+. +|.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 678899988875443 11 013357888999999999999987 49999875 4788999
Q ss_pred HHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhC-----CCEEEEEcCCc-cChh
Q 002176 525 TGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGV-NDAP 598 (956)
Q Consensus 525 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~-----g~~V~m~GDGv-NDap 598 (956)
+.+.+|+.- + .+..-.|.-..++.+.++.+ -+-++|+||-. .|+-
T Consensus 101 ~~~~lgIpv-------l----------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl 151 (168)
T PF09419_consen 101 LEKALGIPV-------L----------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVL 151 (168)
T ss_pred HHHhhCCcE-------E----------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHH
Confidence 999999841 1 02233576666788888765 55699999974 3444
Q ss_pred h
Q 002176 599 A 599 (956)
Q Consensus 599 A 599 (956)
+
T Consensus 152 ~ 152 (168)
T PF09419_consen 152 M 152 (168)
T ss_pred H
Confidence 3
No 157
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=85.62 E-value=1.8 Score=44.93 Aligned_cols=95 Identities=11% Similarity=0.035 Sum_probs=56.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG-RRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
++.|++.++++.|++.|+++.++|.-+.......- +..|+... -..++...+ +..-.|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~-------------------~~~~KP 142 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQD-------------------LGMRKP 142 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEecc-------------------cCCCCC
Confidence 47899999999999999999999987655433221 11233210 001111110 011122
Q ss_pred h--hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002176 571 E--HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 571 e--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+ ==..+.+.+.-...-+.|+||...|+.+-++|++-.
T Consensus 143 ~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 143 EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 2 113344444444456899999999999999888853
No 158
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=84.47 E-value=4.2 Score=42.38 Aligned_cols=113 Identities=19% Similarity=0.213 Sum_probs=66.0
Q ss_pred CCCccHHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCC-cccc--ccCcccHHHHhhhcceEEe
Q 002176 492 PPRHDSAETIRRALNLGV-NVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQ-NKDE--SIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~--~~~~~~~~~~~~~~~vfar 567 (956)
|.-|+..++|+.+++.|- .++++|--|.---..+-+..|+.+- -+.+.+.. ..|. .+.-.+.. ..+-|.+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH----~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYH----TQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCC----CCCccCc
Confidence 777999999999999996 9999998887666666666665310 00000000 0000 00000000 0122444
Q ss_pred eChh-hHHHHHHHHhhCC-------CEEEEEcCCccC-hhhhccCCeeEEec
Q 002176 568 VFPE-HKYEIVKRLQARK-------HICGMTGDGVND-APALKKADIGIAVA 610 (956)
Q Consensus 568 ~~Pe-~K~~iV~~lq~~g-------~~V~m~GDGvND-apALk~AdVGIamg 610 (956)
+-|. -|..++..++..+ ..+-++|||.|| ||.++...--+||-
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 4332 3666666665432 278899999999 58877666666664
No 159
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=84.12 E-value=2.4 Score=47.71 Aligned_cols=93 Identities=15% Similarity=0.083 Sum_probs=65.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR----LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... + .+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-----------~---------------~~~~~ 84 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-----------D---------------ARSIN 84 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-----------e---------------EEEEe
Confidence 4678999999999999999999999999999988877 6653210 0 00111
Q ss_pred e--ChhhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEec
Q 002176 568 V--FPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVA 610 (956)
Q Consensus 568 ~--~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg 610 (956)
- .|+.=.++.+.+.-.-.-+.|+||...|..+.+++..++.+-
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 1 122223334444333467999999999999999998886553
No 160
>PLN02645 phosphoglycolate phosphatase
Probab=82.69 E-value=2.5 Score=47.33 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=38.6
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (956)
|.+--.+.+=|++.++|+.|++.|++++++|+....+...+. +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 555555677799999999999999999999999977766666 456663
No 161
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=81.76 E-value=2.7 Score=44.91 Aligned_cols=89 Identities=21% Similarity=0.184 Sum_probs=55.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEee
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLA---IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGV 568 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~ 568 (956)
|+=|++.+.++.+++.|++|..|||.+.. ...+--++.|.... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~--~~l~lr~~~~~~-----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW--DHLILRPDKDPS-----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB--SCGEEEEESSTS-----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc--chhccccccccc-----------------ccc
Confidence 45578999999999999999999997642 22222355675421 111121111000 000
Q ss_pred ChhhHHHHHHHHhhCCC-EEEEEcCCccChhh
Q 002176 569 FPEHKYEIVKRLQARKH-ICGMTGDGVNDAPA 599 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDapA 599 (956)
..+-|...-+.++++|+ +++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 13448888888888865 78899999999876
No 162
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=81.13 E-value=2.7 Score=42.92 Aligned_cols=93 Identities=15% Similarity=0.130 Sum_probs=60.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhh
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEH 572 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 572 (956)
+-|+ .++++.|++. +++.++||.....+...-++.|+... ...++...+.. ...-.|+-
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~-----------------~~KP~p~~ 147 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQ-----------------HHKPAPDT 147 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH--ceEEEehhhcc-----------------CCCCChHH
Confidence 3344 6899999865 89999999999999988888988532 11222211110 11112222
Q ss_pred HHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 573 KYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 573 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
=....+.++-....|.|+||..+|+.+=++|++-
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 2344444544445588999999999999998875
No 163
>PHA02597 30.2 hypothetical protein; Provisional
Probab=79.84 E-value=3.8 Score=42.30 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=55.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCC--CCCccccCCccccccCcccHHHHhhhcceEEeeC
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM--YPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (956)
++.||+.+++++|++.+ +.+++|.-+..+....-+.+|+..-. +.+.++.+.+. ...
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~--------------------~~k 132 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD--------------------ESK 132 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC--------------------ccc
Confidence 57899999999999875 56667764444433344555553100 00111111000 001
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccChhhhccC--CeeE-Eecccc
Q 002176 570 PEHKYEIVKRLQARKHICGMTGDGVNDAPALKKA--DIGI-AVADAT 613 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~A--dVGI-amg~gt 613 (956)
|+--..+++.+. ...+.|+||..+|.-|-++| ++-. .+..|.
T Consensus 133 p~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 133 EKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred HHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 322222333333 24588999999999999999 8863 344443
No 164
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=79.18 E-value=2.4 Score=43.28 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=61.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.+++.+++++|+ .++.++|.-....+...-+++|+... -..++.+.+... -+....|.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~---------------~~~~~KP~ 143 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC--FDGIFCFDTANP---------------DYLLPKPS 143 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh--hCeEEEeecccC---------------ccCCCCCC
Confidence 47789999999997 47899999888888888888888421 111221111000 00001332
Q ss_pred --hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCee
Q 002176 572 --HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 572 --~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 606 (956)
-=..+++.+......+.|+||...|..+=++|++-
T Consensus 144 p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~ 180 (184)
T TIGR01993 144 PQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCE
Confidence 22344555555556789999999999888888764
No 165
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=76.77 E-value=1.6 Score=40.16 Aligned_cols=48 Identities=19% Similarity=0.272 Sum_probs=35.1
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHhCCC
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETG---RRLGMG 532 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 532 (956)
|.+.-.+.+=|++.++|+.|++.|++++++|-....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 445557788899999999999999999999988755544444 556764
No 166
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=72.11 E-value=20 Score=39.06 Aligned_cols=88 Identities=19% Similarity=0.238 Sum_probs=53.8
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceE
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLA----IAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~----tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf 565 (956)
+.|+=|++.+..+.+++.|++|+.+||.... |..+. ++.|.... ....+.+.....
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~--~~LiLR~~~D~~----------------- 202 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW--EKLILKDPQDNS----------------- 202 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc--ceeeecCCCCCc-----------------
Confidence 4577789999999999999999999999853 44444 23566421 111221110000
Q ss_pred EeeChhhHHHHHHHHhhCCC-EEEEEcCCccCh
Q 002176 566 AGVFPEHKYEIVKRLQARKH-ICGMTGDGVNDA 597 (956)
Q Consensus 566 ar~~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDa 597 (956)
..-..+-|...=+.+.+.|+ +++.+||-.+|-
T Consensus 203 ~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 203 AENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred cchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 00012345444455556665 788999999995
No 167
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=68.42 E-value=80 Score=41.15 Aligned_cols=21 Identities=19% Similarity=0.259 Sum_probs=11.7
Q ss_pred CCeEEEEeccCcCCCcEEEEe
Q 002176 141 DGKWMEEDAAILVPGDIISVK 161 (956)
Q Consensus 141 dG~~~~I~~~~LvpGDiV~l~ 161 (956)
-|....+...|.+|.|.+.++
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~ 206 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFIS 206 (941)
T ss_pred CCCEEEECCCCEecccEEEEE
Confidence 355555555555566655553
No 168
>PRK10444 UMP phosphatase; Provisional
Probab=64.49 E-value=6.8 Score=42.38 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=39.6
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (956)
|.+.-.+.+=|++.++|+.|++.|++++++|+....+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 666667788999999999999999999999999988887777775
No 169
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=63.79 E-value=1.1e+02 Score=39.76 Aligned_cols=270 Identities=17% Similarity=0.130 Sum_probs=147.9
Q ss_pred cccCCHHHHHHHcCCC-CCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCC
Q 002176 18 LENVPMEEVFETLRCN-KEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPD 96 (956)
Q Consensus 18 ~~~~~~~~~~~~l~~~-~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~ 96 (956)
.+-++.+|+.++++.. .+.+.+++......+| +.+|...|...+...-.+.+.+..+.... .+
T Consensus 42 ~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~f------------l~~f~~~~~~iL~~~a~~s~~~~~~~~~~----~~ 105 (917)
T COG0474 42 TTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKF------------LRQFKDPFIILLLVAALLSAFVGDWVDAG----VD 105 (917)
T ss_pred ccCCCHHHHHHHHhhcCCccccccccCcHHHHH------------HHHHHHHHHHHHHHHHHHHHHhhcccccC----cc
Confidence 4566778888887733 4445444433333332 23333333333333333444444432111 24
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc------EEE----EECCeEEEEeccCcCCCcEEEEeCCCee
Q 002176 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAPK------SKV----LRDGKWMEEDAAILVPGDIISVKLGDII 166 (956)
Q Consensus 97 ~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~------~~V----~RdG~~~~I~~~~LvpGDiV~l~~Gd~V 166 (956)
+.....++++..+.....-++..++-++++++....... ..+ +.-|....+.+.|.+|-|...|+..+ .
T Consensus 106 ~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~-l 184 (917)
T COG0474 106 AIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD-L 184 (917)
T ss_pred eeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC-c
Confidence 444555666666666888888888888888776654432 222 34688999999999999999999887 4
Q ss_pred ecceEEeecCCceeecccc--CCcCeeee---cC---CCCccccCCeeccCcEEEEEEEecchhHHHhHHHhhhcccccc
Q 002176 167 PADARLLEGDPLKIDQSAL--TGESLPVT---KG---PGDSVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQQG 238 (956)
Q Consensus 167 PaD~~ll~g~~l~VDeS~L--TGES~pv~---K~---~g~~v~~Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~ 238 (956)
=+|=-.|.|+++-|+--.. ++|..|.. ++ .|..+.+|+-..--...|.-+.-|..+..-+-... ..+.-..
T Consensus 185 ~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~-~~t~l~~ 263 (917)
T COG0474 185 EVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKE-VKTPLQR 263 (917)
T ss_pred eEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccc-cCCcHHH
Confidence 5566666666543433222 22334333 33 47777777733222234445555655543222211 2222233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHH
Q 002176 239 HFQKVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGS 305 (956)
Q Consensus 239 ~l~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~ 305 (956)
.+.+....+..+++...++..+...+.....+...+..++.-++++.--+.|..+-+++.+....=+
T Consensus 264 ~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~ma 330 (917)
T COG0474 264 KLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQRMA 330 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHH
Confidence 4555555565554444333333333321111223345566677777778888888888887765433
No 170
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=62.81 E-value=13 Score=41.08 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=37.3
Q ss_pred CC-ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCC
Q 002176 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGT 533 (956)
Q Consensus 493 lR-~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 533 (956)
+| |++.+++++|++.|+++.++|+-....+.+.-+++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999888888888889999963
No 171
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.73 E-value=22 Score=37.29 Aligned_cols=120 Identities=14% Similarity=0.255 Sum_probs=68.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++-+++.++++++++. +++.++|--....+...-+++|+.+. .. .++...+ +....|+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~-Fd-~v~~s~~-------------------~g~~KP~ 156 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY-FD-AVFISED-------------------VGVAKPD 156 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh-hh-eEEEecc-------------------cccCCCC
Confidence 5678899999999988 99999998777777888889997432 11 1111110 2233444
Q ss_pred hHH--HHHHHHhhCCCEEEEEcCCc-cChhhhccCCe-eEEec-ccc---HHHhhccceeecCCChhHHHHHH
Q 002176 572 HKY--EIVKRLQARKHICGMTGDGV-NDAPALKKADI-GIAVA-DAT---DAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~--~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV-GIamg-~gt---d~Ak~aADivL~~~~~~~iv~ai 636 (956)
.+. ...+.+.-....+.|+||.. ||...-++++. +|-+. .+. +.. ...|..+ .++..+...+
T Consensus 157 ~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~-~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 157 PEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDAL-EAPDYEI--SSLAELLDLL 226 (229)
T ss_pred cHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCc-cCCceEE--cCHHHHHHHH
Confidence 332 23333333345799999975 78344444443 34444 221 122 4455555 3355555444
No 172
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=62.69 E-value=9.1 Score=41.61 Aligned_cols=48 Identities=23% Similarity=0.383 Sum_probs=36.0
Q ss_pred EEeccCCC----CCccHHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHhCCC
Q 002176 485 GLMPLFDP----PRHDSAETIRRALNLGVNVKMITGDQLAIAKE---TGRRLGMG 532 (956)
Q Consensus 485 Gli~~~D~----lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~---ia~~lGi~ 532 (956)
|.+.-.+. +=|++.++|++|++.|+++.++||....+... .-+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 45555555 78899999999999999999999987655333 33455663
No 173
>PLN02151 trehalose-phosphatase
Probab=62.62 E-value=72 Score=36.36 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=41.6
Q ss_pred hHHHHHHHHhhC-C------CEEEEEcCCccChhhhccC-----CeeEEeccccHHHhhccceeecCCChhHHHHHH
Q 002176 572 HKYEIVKRLQAR-K------HICGMTGDGVNDAPALKKA-----DIGIAVADATDAARSASDIVLTEPGLSVIISAV 636 (956)
Q Consensus 572 ~K~~iV~~lq~~-g------~~V~m~GDGvNDapALk~A-----dVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai 636 (956)
+|-..|+.+.+. + ..+.++||-..|-.|++.. ++||-++.+.. ...|++.|-+ -+.+...+
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k--~T~A~y~L~d--p~eV~~~L 341 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAK--ETNASYSLQE--PDEVMEFL 341 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCC--CCcceEeCCC--HHHHHHHH
Confidence 788888877654 1 2489999999999998753 67777774321 2368888844 45554444
No 174
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=62.23 E-value=12 Score=39.91 Aligned_cols=90 Identities=12% Similarity=0.084 Sum_probs=53.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++-||+.++++.|++. +++.++|.-+... +..|+..- -..++...+ +.+..|.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~~-----~~~gl~~~--fd~i~~~~~-------------------~~~~KP~ 165 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQP-----ELFGLGDY--FEFVLRAGP-------------------HGRSKPF 165 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCchH-----HHCCcHHh--hceeEeccc-------------------CCcCCCc
Confidence 5668999999999875 8999998865441 45666321 011111111 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCC-ccChhhhccCCeeEE
Q 002176 572 HK--YEIVKRLQARKHICGMTGDG-VNDAPALKKADIGIA 608 (956)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~m~GDG-vNDapALk~AdVGIa 608 (956)
-. ....+.+.-...-+.||||. ..|+.+=++|++-..
T Consensus 166 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 166 SDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 11 22333343334569999999 599999988887644
No 175
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=62.22 E-value=15 Score=38.93 Aligned_cols=98 Identities=15% Similarity=0.152 Sum_probs=71.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeCh
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFP 570 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~P 570 (956)
.++.|++.+.++.|++.|+.+.+.|+-....+..+-+.+|+... ....+++.+... ..=.|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~--f~~~v~~~dv~~-----------------~KP~P 145 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY--FDVIVTADDVAR-----------------GKPAP 145 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh--cchhccHHHHhc-----------------CCCCC
Confidence 48899999999999999999999999999999999999998532 112222221111 12224
Q ss_pred hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeE
Q 002176 571 EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGI 607 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 607 (956)
+-=..-.+.|.-....|..+.|..|.+.|-++|+.-+
T Consensus 146 d~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 146 DIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred HHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 4445555555555667999999999999999998764
No 176
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=62.14 E-value=25 Score=42.10 Aligned_cols=104 Identities=15% Similarity=0.097 Sum_probs=62.7
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
+++++.+ .+++.|- ++++|+-....+..+|++ +|+.. +.|.+.+...++. +.-.+ ..-..+.-+
T Consensus 111 l~~~a~~---~~~~~g~-~vvVSASp~~~Vepfa~~~LGid~-------VIgTeLev~~~G~-~TG~i---~g~~~c~Ge 175 (497)
T PLN02177 111 VHPETWR---VFNSFGK-RYIITASPRIMVEPFVKTFLGADK-------VLGTELEVSKSGR-ATGFM---KKPGVLVGD 175 (497)
T ss_pred cCHHHHH---HHHhCCC-EEEEECCcHHHHHHHHHHcCCCCE-------EEecccEECcCCE-Eeeee---cCCCCCccH
Confidence 5666555 4456774 499999999999999987 89852 1121111000000 00000 000013457
Q ss_pred hHHHHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEecc
Q 002176 572 HKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVAD 611 (956)
Q Consensus 572 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~ 611 (956)
+|.+-++..........+-||..||.|+|+.||-+.+++.
T Consensus 176 ~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 176 HKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred HHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 7888777543222223678999999999999999999985
No 177
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=60.42 E-value=14 Score=40.76 Aligned_cols=40 Identities=5% Similarity=-0.049 Sum_probs=35.7
Q ss_pred CC-ccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 493 PR-HDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 493 lR-~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
+| |++.+++++|+++|+++.++|+-....+...-+.+|+.
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~ 188 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLE 188 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCC
Confidence 46 89999999999999999999977777778888999995
No 178
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=60.36 E-value=15 Score=39.73 Aligned_cols=48 Identities=8% Similarity=-0.004 Sum_probs=38.0
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHhCCC
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITG---DQLAIAKETGRRLGMG 532 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 532 (956)
|.+.-.+.+=|++.++|++|++.|++++++|| .......+.-+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44445566778999999999999999999997 5566666667778874
No 179
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=58.55 E-value=11 Score=37.74 Aligned_cols=84 Identities=14% Similarity=0.115 Sum_probs=52.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChh
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPE 571 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe 571 (956)
++.||+.++++ ++.++|.-+.......-+++|+.... ..++.+.+ .....|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f--d~v~~~~~-------------------~~~~KP~ 141 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF--DRAFSVDT-------------------VRAYKPD 141 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH--hhhccHhh-------------------cCCCCCC
Confidence 57899999998 36788988888777778888874211 11121111 0111232
Q ss_pred hH--HHHHHHHhhCCCEEEEEcCCccChhhhccC
Q 002176 572 HK--YEIVKRLQARKHICGMTGDGVNDAPALKKA 603 (956)
Q Consensus 572 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~A 603 (956)
-. ....+.+.-....+.||||...|..+-++|
T Consensus 142 p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 142 PVVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 22 344455544456799999999998776553
No 180
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=58.24 E-value=17 Score=39.39 Aligned_cols=119 Identities=16% Similarity=0.171 Sum_probs=67.2
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhh-----cceEEee
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEK-----ADGFAGV 568 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-----~~vfar~ 568 (956)
-++..++++.|++.|+.+.+.|+.........+...|+. .+-+.+.. ..++..-
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g---------------------~~~~~i~~~~~~~~~~~gKP 180 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVG---------------------PFVTALEYATDTKATVVGKP 180 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCch---------------------HHHHHHHHHhCCCceeecCC
Confidence 367888999999989999999887654333222222221 00111110 0112222
Q ss_pred ChhhHHHHHHHHhhCCCEEEEEcCCc-cChhhhccCCee-EEecccc----H--HHhhccceeecCCChhHHHHH
Q 002176 569 FPEHKYEIVKRLQARKHICGMTGDGV-NDAPALKKADIG-IAVADAT----D--AARSASDIVLTEPGLSVIISA 635 (956)
Q Consensus 569 ~Pe~K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdVG-Iamg~gt----d--~Ak~aADivL~~~~~~~iv~a 635 (956)
.|+-=..+.+.+......+.|+||.. +|..+=+++++- |.+..|. + .....+|+++ +++..+...
T Consensus 181 ~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~--~sl~el~~~ 253 (257)
T TIGR01458 181 SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTC--DSLPHAVDL 253 (257)
T ss_pred CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEE--CCHHHHHHH
Confidence 33322344455544457799999996 899998888775 3444442 1 1223467777 556666544
No 181
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=58.02 E-value=1.3e+02 Score=38.16 Aligned_cols=190 Identities=16% Similarity=0.103 Sum_probs=92.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEee-cCCceeeccccC
Q 002176 108 LINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKIDQSALT 186 (956)
Q Consensus 108 li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~-g~~l~VDeS~LT 186 (956)
++..+...+.-+...++-+++.++...... + +.-++-|....+...|.+|=|.++++ |+.+-+|=-.+.
T Consensus 63 ~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~-----~-----~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~ 132 (755)
T TIGR01647 63 GLLLLNATIGFIEENKAGNAVEALKQSLAP-----K-----ARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE 132 (755)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhCCC-----e-----EEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe
Confidence 334444555666666777776654322111 1 11223577889999999999999996 455556666666
Q ss_pred CcCeeeecCC--CCc----cccCCeeccCcEEEEEEEecchhHHHhH---HHhhhcccccchHHHHHHHHHHHHHHHHHH
Q 002176 187 GESLPVTKGP--GDS----VYSGSTCKQGEIEAVVIATGVHTFFGKA---AHLVDSTNQQGHFQKVLTAIGNFCICSIAV 257 (956)
Q Consensus 187 GES~pv~K~~--g~~----v~~Gs~v~~G~~~~~V~~tG~~T~~gki---~~l~~~~~~~~~l~~~~~~i~~~~~~~i~i 257 (956)
|+..-+.-.. |+. -..|..+..|....-=..++.-+..|.- .+..+.-.+..+-...+.+....+...++.
T Consensus 133 g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~ 212 (755)
T TIGR01647 133 GDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIV 212 (755)
T ss_pred cCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHH
Confidence 6644443221 321 2345556666533222222222222221 111110111111111122222222222222
Q ss_pred HHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHHHHHHH
Q 002176 258 GMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHR 307 (956)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~~~~~~ 307 (956)
..++..++.+..+.......+...+...++..-.+.|.+++++...+...
T Consensus 213 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~ 262 (755)
T TIGR01647 213 LIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPAVLSVTMAV 262 (755)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence 22222333333222212344556667777778888999999999887653
No 182
>PTZ00445 p36-lilke protein; Provisional
Probab=57.91 E-value=21 Score=37.48 Aligned_cols=63 Identities=14% Similarity=0.211 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEE------------EeccCCCCCccHHHHHHHHHhCCCeE
Q 002176 444 ERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIG------------LMPLFDPPRHDSAETIRRALNLGVNV 511 (956)
Q Consensus 444 ~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lG------------li~~~D~lR~~~~~aI~~l~~aGI~v 511 (956)
.+.....++.+.+.|.|++++-+.. ++++ ...+--.++|+.+.-+++|+++||+|
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-------------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v 94 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-------------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKI 94 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-------------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeE
Confidence 3445566778999999999886643 3332 11112237999999999999999999
Q ss_pred EEEcCCCh
Q 002176 512 KMITGDQL 519 (956)
Q Consensus 512 ~miTGD~~ 519 (956)
.++|=-..
T Consensus 95 ~VVTfSd~ 102 (219)
T PTZ00445 95 SVVTFSDK 102 (219)
T ss_pred EEEEccch
Confidence 99995443
No 183
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=56.90 E-value=17 Score=36.72 Aligned_cols=91 Identities=29% Similarity=0.383 Sum_probs=61.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQL----AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
-|++=+++.|..-++.|=++..+||..+ .+++..|+...| +++.+ .+|+.
T Consensus 114 IPKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i-~~m~p-------------------------v~f~G 167 (237)
T COG3700 114 IPKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI-TNMNP-------------------------VIFAG 167 (237)
T ss_pred chHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc-CCCcc-------------------------eeecc
Confidence 3677788899999999999999999985 456667776666 23221 12443
Q ss_pred eCh-hhHHHHHHHHhhCCCEEEEEcCCccChhhhccCCe-eEEe
Q 002176 568 VFP-EHKYEIVKRLQARKHICGMTGDGVNDAPALKKADI-GIAV 609 (956)
Q Consensus 568 ~~P-e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam 609 (956)
-.| -.++.=...+|+++ +-..-||.-||.-|-|.|++ ||-+
T Consensus 168 dk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 168 DKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 333 12233355667665 44578999999999999876 4544
No 184
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=55.91 E-value=8.5 Score=38.72 Aligned_cols=42 Identities=17% Similarity=0.113 Sum_probs=37.7
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 490 FDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.=..||++.+.++.|.+. .++.+.|--....|..+.+.++..
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~ 81 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRG 81 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcC
Confidence 336899999999999987 999999999999999999998864
No 185
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=55.36 E-value=20 Score=36.76 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=57.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhc------ceEE
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA------DGFA 566 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~------~vfa 566 (956)
+.+++.+++..++++|.+++|+|-= -||....++...+...+ .-..+.++.. -.+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgyf~~~~f~~~~-------~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGYFTEADFDKLH-------NKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccCccHHHHHHHH-------HHHHHHHHHcCCccceEEEC
Confidence 5689999999999999999999952 24432222111110000 0000111110 1234
Q ss_pred eeChhh--------HHHHHHHHhhCC---CEEEEEcCCccChhhhccCCeeEEe
Q 002176 567 GVFPEH--------KYEIVKRLQARK---HICGMTGDGVNDAPALKKADIGIAV 609 (956)
Q Consensus 567 r~~Pe~--------K~~iV~~lq~~g---~~V~m~GDGvNDapALk~AdVGIam 609 (956)
.-.|++ ...+.+.+++.+ ..-.||||-..|..+-..|+++ .+
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444443 244556666654 5678999999999998888887 44
No 186
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=51.58 E-value=55 Score=37.15 Aligned_cols=102 Identities=17% Similarity=0.153 Sum_probs=63.5
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh-C-------CCCCCCCCccccCCcccc----------------c
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL-G-------MGTNMYPSSALLGQNKDE----------------S 549 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l-G-------i~~~~~~~~~l~g~~~~~----------------~ 549 (956)
-|++.+.+++|+++|+++.++|+-....+..+-+.+ | +.. +-..++.+..+.. .
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~--yFD~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRD--YFDVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHh--hCcEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 579999999999999999999999999999988886 6 221 1122232222110 0
Q ss_pred cCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCc-cChhhhc
Q 002176 550 IVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGV-NDAPALK 601 (956)
Q Consensus 550 ~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGv-NDapALk 601 (956)
+....... +++..|+++=+-. .+-+.+...+..|+++||-. .|.-.-+
T Consensus 264 ~~~~~~~~-l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD~i~~Di~~~k 312 (343)
T TIGR02244 264 LKWGEVDG-LEPGKVYSGGSLK---QFHELLKWRGKEVLYFGDHIYGDLLRSK 312 (343)
T ss_pred ccCCcccc-ccCCCeEeCCCHH---HHHHHHCCCCCcEEEECCcchHHHHhhH
Confidence 00001111 2333455544432 34455666789999999986 5776555
No 187
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=51.38 E-value=34 Score=41.23 Aligned_cols=40 Identities=15% Similarity=0.126 Sum_probs=32.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHhCCC
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQL------------AIAKETGRRLGMG 532 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 532 (956)
+-|+++++++.|++.|++++++|.=.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999997433 3466777777774
No 188
>PLN02423 phosphomannomutase
Probab=50.97 E-value=19 Score=38.75 Aligned_cols=43 Identities=26% Similarity=0.255 Sum_probs=35.9
Q ss_pred hhHHHHHHHHhhCCCEEEEEcC----CccChhhhcc-CCeeEEeccccH
Q 002176 571 EHKYEIVKRLQARKHICGMTGD----GVNDAPALKK-ADIGIAVADATD 614 (956)
Q Consensus 571 e~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~-AdVGIamg~gtd 614 (956)
-+|..-++.|+ ...-|++.|| |-||.+||+. -=.||.+.+=.|
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 47999999999 6678899999 8999999997 778899864333
No 189
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=48.60 E-value=7.1e+02 Score=33.07 Aligned_cols=213 Identities=15% Similarity=0.209 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEee---cCCcee
Q 002176 104 VTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE---GDPLKI 180 (956)
Q Consensus 104 i~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~---g~~l~V 180 (956)
++++++......+.-+..+++.++|+ .+.. ......+ ++-|....+...|.||=|.++++ |+.+-+
T Consensus 197 ~~i~~i~~~~~~~~~~~~~k~~~~L~-~~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 197 LCIVFMSSTSISLSVYQIRKQMQRLR-DMVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-Hhhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 44444555556666667677666543 2211 1122222 34588999999999999999997 665667
Q ss_pred eccccCCcCeeeecC--CCCc--ccc--------C------------CeeccCcEEEEEEEe-cchhHHHhHHHhhhcc-
Q 002176 181 DQSALTGESLPVTKG--PGDS--VYS--------G------------STCKQGEIEAVVIAT-GVHTFFGKAAHLVDST- 234 (956)
Q Consensus 181 DeS~LTGES~pv~K~--~g~~--v~~--------G------------s~v~~G~~~~~V~~t-G~~T~~gki~~l~~~~- 234 (956)
|=-.+.|+ .-|.=. .|+. +.. | ..+..|.....+... |. |.....+-.+
T Consensus 266 D~~ll~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~----g~~~~vV~~TG 340 (1054)
T TIGR01657 266 DSVLLSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGD----TGCLAIVVRTG 340 (1054)
T ss_pred eEEEEeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCC----CcEEEEEEeCC
Confidence 77777774 222211 1221 111 1 012233322221111 11 1111112111
Q ss_pred --cccchHHH----------HHHHHHHHHHHHHHHHHHHHHHhHhhccccCccchHHHHHHHHHhhcCCchhHHHHHHHH
Q 002176 235 --NQQGHFQK----------VLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYRPGIDNLLVLLIGGIPIAMPTVLSVTMA 302 (956)
Q Consensus 235 --~~~~~l~~----------~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~v~~~ 302 (956)
...+.+.+ ..++-...++..++++.++.+++.+. ........+...+...+..+=.+.|.++++++.
T Consensus 341 ~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~-~~~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~t 419 (1054)
T TIGR01657 341 FSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTII-ELIKDGRPLGKIILRSLDIITIVVPPALPAELS 419 (1054)
T ss_pred ccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHhhcCchHHHHHH
Confidence 11222222 22222222222222222222222221 111112233444555566677788999999999
Q ss_pred HHHHHHHhCCCcccccchhhhhcCceEEeeccccceeeCceeE
Q 002176 303 IGSHRLSLQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSV 345 (956)
Q Consensus 303 ~~~~~l~~~~ilvk~~~~lE~Lg~v~~i~~DKTGTLT~n~m~v 345 (956)
++... ++-.|.+-.++|.+-.---|-|+.++
T Consensus 420 i~l~~------------~~~rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 420 IGINN------------SLARLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHH------------HHHHHHHCCEEEcCcccceecceeeE
Confidence 88643 34566777889988888888887766
No 190
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=48.13 E-value=81 Score=31.61 Aligned_cols=103 Identities=18% Similarity=0.172 Sum_probs=66.7
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHh-----CCCCCCCCCccccCCccccccCcccHHHHhhhc
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKET---GRRL-----GMGTNMYPSSALLGQNKDESIVALPVDELIEKA 562 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~i---a~~l-----Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 562 (956)
|..++++.+..+.+++.|++++-+|+...--|..+ -.+. +++. ..++...+. -+.. ..-
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~----Gpv~~sP~~-------l~~a--l~r 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD----GPVLLSPDS-------LFSA--LHR 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC----CCEEECCcc-------hhhh--hhc
Confidence 79999999999999999999999999985443332 2222 3321 111111000 0000 001
Q ss_pred ceEEeeChhhHHHHHHHHhhC-----CCEEEEEcCCccChhhhccCCee
Q 002176 563 DGFAGVFPEHKYEIVKRLQAR-----KHICGMTGDGVNDAPALKKADIG 606 (956)
Q Consensus 563 ~vfar~~Pe~K~~iV~~lq~~-----g~~V~m~GDGvNDapALk~AdVG 606 (956)
.+..+-.-+.|....+.+++. ...++.-|...+|+.|-++++|-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 234444457898888888864 45788899999999999977653
No 191
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=46.21 E-value=20 Score=33.89 Aligned_cols=77 Identities=17% Similarity=0.198 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCeEEEEEEee--cCCC----CccCC--CCCceEEEEeccCCCCCccHHHHHHHHHhCCCe-EEEEcCCCh
Q 002176 449 AIIDKFAERGLRSLAVAYQE--VPDG----RKESS--GGPWQFIGLMPLFDPPRHDSAETIRRALNLGVN-VKMITGDQL 519 (956)
Q Consensus 449 ~~i~~~a~~G~RvlavA~~~--l~~~----~~~~~--e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~-v~miTGD~~ 519 (956)
..++.+.++|+++..+.-+. +... .-++. .-|+..+. -+.+.+.+.+++|.+.|++ +|+.+|...
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iDlavv~------~~~~~~~~~v~~~~~~g~~~v~~~~g~~~ 91 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPIDLAVVC------VPPDKVPEIVDEAAALGVKAVWLQPGAES 91 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-SEEEE-------S-HHHHHHHHHHHHHHT-SEEEE-TTS--
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCCEEEEE------cCHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence 34556666999988875332 1110 00111 11222222 3556889999999999997 899999999
Q ss_pred HHHHHHHHHhCC
Q 002176 520 AIAKETGRRLGM 531 (956)
Q Consensus 520 ~tA~~ia~~lGi 531 (956)
+.+.+.|++.|+
T Consensus 92 ~~~~~~a~~~gi 103 (116)
T PF13380_consen 92 EELIEAAREAGI 103 (116)
T ss_dssp HHHHHHHHHTT-
T ss_pred HHHHHHHHHcCC
Confidence 999999999887
No 192
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=46.13 E-value=22 Score=34.19 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=28.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHH
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAI 521 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~t 521 (956)
+++.+++.++++++++.|++++.+||.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 6788999999999999999999999998654
No 193
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=43.32 E-value=95 Score=34.58 Aligned_cols=141 Identities=15% Similarity=0.146 Sum_probs=77.5
Q ss_pred cCCCCCccHHHHHHHHHhCCCeE---EEEcCCChHHHH------HHHHHhCCCCCCCCC-------------------cc
Q 002176 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIAK------ETGRRLGMGTNMYPS-------------------SA 540 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~v---~miTGD~~~tA~------~ia~~lGi~~~~~~~-------------------~~ 540 (956)
+.++++++.++.|+.+++.|++. .++-||+++... ..|+++||......- ..
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 45677889999999998888763 556688875433 456677885321100 00
Q ss_pred ccCC----ccccc------------------cCcccHHHHhhhcceEEeeChhhHHHHHHHHhh--CCCEEEEEcCC-cc
Q 002176 541 LLGQ----NKDES------------------IVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDG-VN 595 (956)
Q Consensus 541 l~g~----~~~~~------------------~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDG-vN 595 (956)
+.|- .+... +...++.++...-..|.=|||.-=.++++...- .|..|+++|-| +-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 0000 00000 011112223223234566777776677766543 48999999997 44
Q ss_pred Chh---hhccCCeeEEec-c--c-cHHHhhccceeecCCCh
Q 002176 596 DAP---ALKKADIGIAVA-D--A-TDAARSASDIVLTEPGL 629 (956)
Q Consensus 596 Dap---ALk~AdVGIamg-~--g-td~Ak~aADivL~~~~~ 629 (956)
=.| .|.+++.-+.+- + . ...+-..||+|++-=+-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~ 212 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGR 212 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCC
Confidence 433 455666666553 1 1 12223468999875433
No 194
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=43.04 E-value=19 Score=24.92 Aligned_cols=15 Identities=47% Similarity=0.669 Sum_probs=13.4
Q ss_pred CCCCCHHHHHHHHHh
Q 002176 34 KEGLSTEAAEERLTI 48 (956)
Q Consensus 34 ~~GLt~~e~~~r~~~ 48 (956)
++|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 579999999999975
No 195
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=42.71 E-value=8.9e+02 Score=31.52 Aligned_cols=81 Identities=20% Similarity=0.290 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC------------cEEE----EECCeEEEEeccCcCCCcEEEEeCCCe
Q 002176 102 GIVTLLLINSTISFIEENNAGNAAAALMASLAP------------KSKV----LRDGKWMEEDAAILVPGDIISVKLGDI 165 (956)
Q Consensus 102 ~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~------------~~~V----~RdG~~~~I~~~~LvpGDiV~l~~Gd~ 165 (956)
.++++..+...+.-+...++.++++++...... ...| +.-|....+..-|.+|-|.+.++..+
T Consensus 119 ~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~- 197 (903)
T PRK15122 119 TMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD- 197 (903)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc-
Confidence 344444444555555666666667666443221 1222 23588999999999999998887443
Q ss_pred eecceEEeecCCceeecc
Q 002176 166 IPADARLLEGDPLKIDQS 183 (956)
Q Consensus 166 VPaD~~ll~g~~l~VDeS 183 (956)
+=+|==.+.|++.-|+-.
T Consensus 198 l~VDES~LTGES~PV~K~ 215 (903)
T PRK15122 198 LFISQAVLTGEALPVEKY 215 (903)
T ss_pred eEEEccccCCCCcceeee
Confidence 445666666665444443
No 196
>PTZ00174 phosphomannomutase; Provisional
Probab=42.57 E-value=33 Score=36.91 Aligned_cols=33 Identities=18% Similarity=0.383 Sum_probs=29.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEcCCChHHHHH
Q 002176 492 PPRHDSAETIRRALNLGVNVKMITGDQLAIAKE 524 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ 524 (956)
++-+.+.++|+++++.||++++.||.+......
T Consensus 22 ~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~ 54 (247)
T PTZ00174 22 PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKE 54 (247)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH
Confidence 478899999999999999999999999875544
No 197
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=39.61 E-value=1.5e+02 Score=28.40 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=38.8
Q ss_pred HHHHHHHhhCCCEEEEEcCCcc--ChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHH
Q 002176 574 YEIVKRLQARKHICGMTGDGVN--DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNY 649 (956)
Q Consensus 574 ~~iV~~lq~~g~~V~m~GDGvN--DapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~ 649 (956)
.++++.+. +=+.+...|-|+| |.+++++-+|-++=..|. .+...||.+ ..+--..-+.++...+|+..|
T Consensus 52 ~~~l~~~~-~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~~g~-~~~aVAE~a-----~~T~e~~~~~~~~~~~ni~~~ 122 (133)
T PF00389_consen 52 AEVLEAAP-NLKLISTAGAGVDNIDLEAAKERGIPVTNVPGY-NAEAVAEHA-----GYTDEARERMAEIAAENIERF 122 (133)
T ss_dssp HHHHHHHT-T-SEEEESSSSCTTB-HHHHHHTTSEEEE-TTT-THHHHHHHH-----TGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccc-eeEEEEEcccccCcccHHHHhhCeEEEEEeCCc-CCcchhccc-----hhHHHHHHHHHHHHHHHHHHH
Confidence 45667664 3357889999998 788888888888764321 122334444 222222233455555555554
No 198
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=38.71 E-value=1.1e+02 Score=33.35 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=27.7
Q ss_pred cCCCCCccHHHHHHHHHhCCCeEE-EEcCCCh-HHHHHHHHHh
Q 002176 489 LFDPPRHDSAETIRRALNLGVNVK-MITGDQL-AIAKETGRRL 529 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~v~-miTGD~~-~tA~~ia~~l 529 (956)
+-|.|-++..+.++.+++.|++.+ +++=..+ +....+++..
T Consensus 121 ipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 121 VADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred ECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 335555788899999999999854 6655553 4555666654
No 199
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=38.70 E-value=1.1e+02 Score=33.07 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=68.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe--e
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG--V 568 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar--~ 568 (956)
-.+|+++.+.++.|++.+|.+.+.|+-=-.+..++=++-|...++. .++ ...++ +++- .....|-. .
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv--~Vv-SN~M~-------Fd~~-g~l~gF~~~lI 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV--KVV-SNFMD-------FDED-GVLVGFKGPLI 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE--EEE-EE-EE-------E-TT-SBEEEE-SS--
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe--EEE-eeeEE-------ECCc-ceEeecCCCce
Confidence 3689999999999999999999999776666666666666543221 111 11000 0000 00000000 0
Q ss_pred ChhhHHH-------HHHHHhhCCCEEEEEcCCccChhhhccC---CeeEEec--c-c----cHHHhhccceeecCCChhH
Q 002176 569 FPEHKYE-------IVKRLQARKHICGMTGDGVNDAPALKKA---DIGIAVA--D-A----TDAARSASDIVLTEPGLSV 631 (956)
Q Consensus 569 ~Pe~K~~-------iV~~lq~~g~~V~m~GDGvNDapALk~A---dVGIamg--~-g----td~Ak~aADivL~~~~~~~ 631 (956)
-+-.|-+ .-+.++.+ ..|...||..-|+-|-.-. +.-+.+| + . -+.=+++=||||.+|.=-.
T Consensus 158 H~~NKn~~~l~~~~~~~~~~~R-~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm~ 236 (246)
T PF05822_consen 158 HTFNKNESALEDSPYFKQLKKR-TNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTMD 236 (246)
T ss_dssp -TT-HHHHHHTTHHHHHCTTT---EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-H
T ss_pred EEeeCCcccccCchHHHHhccC-CcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCch
Confidence 0111211 12334433 4688999999999998665 4444445 2 2 2344577899999997656
Q ss_pred HHHHH
Q 002176 632 IISAV 636 (956)
Q Consensus 632 iv~ai 636 (956)
++.+|
T Consensus 237 v~~~i 241 (246)
T PF05822_consen 237 VPNAI 241 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66555
No 200
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=38.34 E-value=7.8e+02 Score=32.10 Aligned_cols=141 Identities=12% Similarity=0.167 Sum_probs=69.5
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHH--HH-hc--C---cCCcccCccc--C-CCCchhhHHHHHHHHHHHHH
Q 002176 702 SPLPDSWKLAEIFTTGVILGGYLAMMTVIFFWA--AY-QT--D---FFPRTFGVSS--L-HEKDIDDWKKLASAIYLQVS 770 (956)
Q Consensus 702 ~~~p~~~~~~~~~~~~~~~G~~~~~~~~~~f~~--~~-~~--~---~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~ 770 (956)
.+....|.+..++..++++++.. +..+.+++. .. .. . .+....+... . ........ .+.++++.++.
T Consensus 761 ~~l~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~-~f~~~v~~q~~ 838 (917)
T TIGR01116 761 EPLITGWLFFRYLVVGVYVGLAT-VGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTI-SLSVLVVIEMF 838 (917)
T ss_pred CCcccHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCcccccccccccccccccccccccccccchHHH-HHHHHHHHHHH
Confidence 34556677778888888888763 333333222 11 00 0 0111011000 0 00111111 46677777776
Q ss_pred HHHHHHHHHHhc--CCCccccChhHHHHHHHHHHHHHHHHHH-HhccccccccCchhHHHHHHHHHHHHHHHHHHHHH
Q 002176 771 TISQALIFVTRA--RSWSFVDRPGLLLVLAFAVAQLIATLIA-VYANWSFAAIEGVGWGWAGVVWLYNLIFYIPLDFI 845 (956)
Q Consensus 771 i~~~~~i~~~rs--~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (956)
-..++.-. .++ +.-.|..+..++.++..++.+++.++++ .-..+++.+++...|.+.+...+..+++.-+...+
T Consensus 839 ~~~~~r~~-~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 915 (917)
T TIGR01116 839 NALNALSE-DQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFF 915 (917)
T ss_pred HHHHHcCC-cccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665221 121 0011333444444444444555554443 34446777888999988777777766665554443
No 201
>PRK11507 ribosome-associated protein; Provisional
Probab=37.88 E-value=36 Score=29.17 Aligned_cols=27 Identities=22% Similarity=0.250 Sum_probs=23.8
Q ss_pred EEEEECCeEEEEeccCcCCCcEEEEeC
Q 002176 136 SKVLRDGKWMEEDAAILVPGDIISVKL 162 (956)
Q Consensus 136 ~~V~RdG~~~~I~~~~LvpGDiV~l~~ 162 (956)
-.|..||+...-.-..|.|||+|.+..
T Consensus 37 g~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 37 GQVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred CceEECCEEecccCCCCCCCCEEEECC
Confidence 368889999999999999999999864
No 202
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=37.85 E-value=1.5e+02 Score=36.47 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=17.7
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHH
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLAIA 522 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA 522 (956)
-|.|+..-+..||+.+-...++.||..+..
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~c 741 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFC 741 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHH
Confidence 355666666666666666666666665443
No 203
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=37.55 E-value=1.5e+02 Score=30.08 Aligned_cols=106 Identities=19% Similarity=0.158 Sum_probs=64.7
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHH-HHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHH
Q 002176 496 DSAETIRRALNLGVNVKMITGDQLAI-AKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~t-A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~ 574 (956)
|.-++++++++.|=++-+++=++..- +..+.+-+|+. ...+.=-+|++=.
T Consensus 65 Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 115 (176)
T PF06506_consen 65 DILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVD-----------------------------IKIYPYDSEEEIE 115 (176)
T ss_dssp HHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-E-----------------------------EEEEEESSHHHHH
T ss_pred HHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCc-----------------------------eEEEEECCHHHHH
Confidence 55556666666665666655444322 44444445442 2234555688888
Q ss_pred HHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHh-hccceeecCCChhHHHHHHHHHHHHHHHHHH
Q 002176 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAAR-SASDIVLTEPGLSVIISAVLTSRAIFQRMKN 648 (956)
Q Consensus 575 ~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak-~aADivL~~~~~~~iv~ai~~gR~~~~~i~~ 648 (956)
..|+.+++.|. -+.+|++. ..+.|+ .--..++...+-.+|..|+.+++++++..++
T Consensus 116 ~~i~~~~~~G~-~viVGg~~-----------------~~~~A~~~gl~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 116 AAIKQAKAEGV-DVIVGGGV-----------------VCRLARKLGLPGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHTT---EEEESHH-----------------HHHHHHHTTSEEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCC-cEEECCHH-----------------HHHHHHHcCCcEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 89999999984 44677662 122222 2445788888999999999999999887664
No 204
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=37.35 E-value=37 Score=37.13 Aligned_cols=47 Identities=19% Similarity=0.209 Sum_probs=39.9
Q ss_pred EEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHh
Q 002176 483 FIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRL 529 (956)
Q Consensus 483 ~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~l 529 (956)
+=|.+.--+.+=|++.++|++|+++|++++.+|--...+...+++++
T Consensus 15 lDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 15 LDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 34778888899999999999999999999999998877777555554
No 205
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=37.17 E-value=34 Score=37.56 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=35.0
Q ss_pred EEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHhCCC
Q 002176 485 GLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKE---TGRRLGMG 532 (956)
Q Consensus 485 Gli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~---ia~~lGi~ 532 (956)
|.+.-.+.+=|++.++|++|++.|+++..+|+....+... --+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 4444567778899999999999999999999976433322 22456764
No 206
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=37.07 E-value=9.7e+02 Score=31.03 Aligned_cols=39 Identities=21% Similarity=0.336 Sum_probs=24.1
Q ss_pred CCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCcee
Q 002176 141 DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKI 180 (956)
Q Consensus 141 dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~V 180 (956)
-|....+..-|.+|-|.+.++. .-+-+|==.+.|++.-|
T Consensus 151 ~GDiV~l~~Gd~VPaDg~li~g-~~l~VDES~LTGES~PV 189 (867)
T TIGR01524 151 PGDLIELAAGDIIPADARVISA-RDLFINQSALTGESLPV 189 (867)
T ss_pred CCCEEEECCCCEEcccEEEEec-CceEEEcccccCCCCcc
Confidence 4677777777777888777763 33344655555655333
No 207
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.69 E-value=1.3e+02 Score=33.47 Aligned_cols=63 Identities=16% Similarity=0.221 Sum_probs=37.8
Q ss_pred eEEeeChhhHHHHHHHHh--hCCCEEEEEc-CCccChh---hhccCCeeEEecc----ccHHHhhccceeecC
Q 002176 564 GFAGVFPEHKYEIVKRLQ--ARKHICGMTG-DGVNDAP---ALKKADIGIAVAD----ATDAARSASDIVLTE 626 (956)
Q Consensus 564 vfar~~Pe~K~~iV~~lq--~~g~~V~m~G-DGvNDap---ALk~AdVGIamg~----gtd~Ak~aADivL~~ 626 (956)
.|.=|||.-=.++++... -.|..|+++| -|.-=.| .|.+++.-+.+-+ ..+.+-..||+|++-
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 136 ALVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 456677776666666653 2589999999 4443333 4555666655532 222233478998864
No 208
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=36.38 E-value=8.7e+02 Score=31.60 Aligned_cols=85 Identities=16% Similarity=0.128 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEec-cCcCCCcEEEEeCCCeeecceEEee-cCCceee
Q 002176 104 VTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDA-AILVPGDIISVKLGDIIPADARLLE-GDPLKID 181 (956)
Q Consensus 104 i~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~-~~LvpGDiV~l~~Gd~VPaD~~ll~-g~~l~VD 181 (956)
++++++..+..++..+...++.+++.++..... . +...+.- .+-.-|....+...|.+|=|.++++ |+.+-+|
T Consensus 126 ~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~----~-~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaD 200 (902)
T PRK10517 126 GVIALMVAISTLLNFIQEARSTKAADALKAMVS----N-TATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPAD 200 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC----C-eEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeee
Confidence 334444444555666667777777665433221 1 1111110 0000156788899999999999886 4555567
Q ss_pred ccccCCcCeeee
Q 002176 182 QSALTGESLPVT 193 (956)
Q Consensus 182 eS~LTGES~pv~ 193 (956)
=-.+.|++.-|.
T Consensus 201 g~li~g~~l~VD 212 (902)
T PRK10517 201 LRILQARDLFVA 212 (902)
T ss_pred EEEEEcCceEEE
Confidence 666777665443
No 209
>PLN02591 tryptophan synthase
Probab=35.92 E-value=1.7e+02 Score=31.83 Aligned_cols=83 Identities=13% Similarity=0.162 Sum_probs=47.7
Q ss_pred CCccHHHHHHHHHhCCCeE-EEEcCCCh-HHHHHHHHHh-CCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeC
Q 002176 493 PRHDSAETIRRALNLGVNV-KMITGDQL-AIAKETGRRL-GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVF 569 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v-~miTGD~~-~tA~~ia~~l-Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~ 569 (956)
|=++..+..+.|++.|+.. .++|-... +..+.++... |... .....-++|... -.
T Consensus 116 P~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-~Vs~~GvTG~~~---------------------~~ 173 (250)
T PLN02591 116 PLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-LVSSTGVTGARA---------------------SV 173 (250)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-EeeCCCCcCCCc---------------------CC
Confidence 3378888888888889874 45555553 4566666654 2210 000111222111 12
Q ss_pred hhhHHHHHHHHhhCCCEEEEEcCCccCh
Q 002176 570 PEHKYEIVKRLQARKHICGMTGDGVNDA 597 (956)
Q Consensus 570 Pe~K~~iV~~lq~~g~~V~m~GDGvNDa 597 (956)
|++=.+.++.+++....-.++|=|+++.
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGFGI~~~ 201 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGFGISKP 201 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeCCCCCH
Confidence 5555677888887655666789999843
No 210
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.69 E-value=1.7e+02 Score=32.39 Aligned_cols=63 Identities=11% Similarity=0.218 Sum_probs=39.0
Q ss_pred eEEeeChhhHHHHHHHHhh--CCCEEEEEcC-CccChh---hhccCCeeEEe--ccccH--HHhhccceeecC
Q 002176 564 GFAGVFPEHKYEIVKRLQA--RKHICGMTGD-GVNDAP---ALKKADIGIAV--ADATD--AARSASDIVLTE 626 (956)
Q Consensus 564 vfar~~Pe~K~~iV~~lq~--~g~~V~m~GD-GvNDap---ALk~AdVGIam--g~gtd--~Ak~aADivL~~ 626 (956)
.|.=|||.-=.++++...- .|..|+++|- |+-=.| .|.+++.-+.+ ....+ ..-..||+|++-
T Consensus 136 ~~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 136 VMIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 4667778776666666542 4899999999 655555 45555554444 22221 223479999864
No 211
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=35.41 E-value=1.4e+02 Score=32.58 Aligned_cols=88 Identities=10% Similarity=0.092 Sum_probs=47.3
Q ss_pred CCCCCccHHHHHHHHHhCCCe-EEEEcCCC-hHHHHHHHHHhC-CCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002176 490 FDPPRHDSAETIRRALNLGVN-VKMITGDQ-LAIAKETGRRLG-MGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~-v~miTGD~-~~tA~~ia~~lG-i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
-|-|=++..+.++.|++.|+. +.++|=.. .+.-+.+++... ...- ....-.+|..
T Consensus 126 pDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~a~gFIY~-vS~~GvTG~~--------------------- 183 (263)
T CHL00200 126 PDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARAAPGCIYL-VSTTGVTGLK--------------------- 183 (263)
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHhCCCcEEE-EcCCCCCCCC---------------------
Confidence 344446777777888888876 44555444 345555555543 2110 0111222221
Q ss_pred eeChhhHHHHHHHHhhCCCEEEEEcCCccChhh
Q 002176 567 GVFPEHKYEIVKRLQARKHICGMTGDGVNDAPA 599 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapA 599 (956)
...|++-.++++.+++.-..-.++|=|+|+..-
T Consensus 184 ~~~~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~ 216 (263)
T CHL00200 184 TELDKKLKKLIETIKKMTNKPIILGFGISTSEQ 216 (263)
T ss_pred ccccHHHHHHHHHHHHhcCCCEEEECCcCCHHH
Confidence 012455567788887764444567888885443
No 212
>PRK09479 glpX fructose 1,6-bisphosphatase II; Reviewed
Probab=34.97 E-value=1.1e+02 Score=34.01 Aligned_cols=106 Identities=23% Similarity=0.299 Sum_probs=58.4
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-hCCCCCCCCCccccCCccccccCcccHHHHhhhcceE
Q 002176 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRR-LGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGF 565 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~-lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vf 565 (956)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+.. .|++ .+ .=.|...+.-+....+. ....+..
T Consensus 161 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDVa~ai~~~~~~s~vD--~~---~GiGGaPEGVlaAaAlk--clGG~mq 231 (319)
T PRK09479 161 VVVLDRPRH--EELIAEIREAGARVKLISDGDVAGAIATAFPDTGVD--IL---MGIGGAPEGVLAAAALK--CLGGEMQ 231 (319)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHhcCCCCee--EE---EEcCcChHHHHHHHHHH--hcCceeE
Confidence 456688887 4889999999999999985555555555421 1110 00 00111111100000000 0112456
Q ss_pred EeeChhhHHHHHHHHhh---------------CCCEEEEEcCCccChhhhc
Q 002176 566 AGVFPEHKYEIVKRLQA---------------RKHICGMTGDGVNDAPALK 601 (956)
Q Consensus 566 ar~~Pe~K~~iV~~lq~---------------~g~~V~m~GDGvNDapALk 601 (956)
+|+-|....+.-+..+. +|.-|.++.-|+.|...|+
T Consensus 232 gRL~~~~~~e~~r~~~~Gi~D~~kv~~~~dLv~gddv~F~ATGVTdG~lL~ 282 (319)
T PRK09479 232 GRLLPRNEEERARAKKMGITDLDKVLTLDDLVRGDDVIFAATGVTDGDLLK 282 (319)
T ss_pred EeECCCCHHHHHHHHHcCCcChhheeEHHHcccCCCEEEEEeCCCCCCCcC
Confidence 77777655443333221 2337889999999999998
No 213
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=34.12 E-value=1.4e+02 Score=33.01 Aligned_cols=51 Identities=18% Similarity=0.306 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcCCcccCcccCCCCchhhHHHHHHHHHHHHHHHHHH
Q 002176 719 ILGGYLAMMTVIFFWAAYQTDFFPRTFGVSSLHEKDIDDWKKLASAIYLQVSTISQA 775 (956)
Q Consensus 719 ~~G~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 775 (956)
+.++..+--...+.++.....||++.||+++...+ ..-+++|....+.+-.
T Consensus 269 ~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~------~i~s~vy~Isav~spv 319 (459)
T KOG4686|consen 269 LVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAG------NILSTVYGISAVLSPV 319 (459)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhcc------chhhhhhhhhhhhhhh
Confidence 33333333333444556667789999998765443 2345556554444444
No 214
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.05 E-value=4.6e+02 Score=27.34 Aligned_cols=9 Identities=22% Similarity=0.423 Sum_probs=4.0
Q ss_pred cChhHHHHH
Q 002176 789 DRPGLLLVL 797 (956)
Q Consensus 789 ~~~~~~l~~ 797 (956)
.++++|..+
T Consensus 142 ~r~~~~k~~ 150 (206)
T PF06570_consen 142 KRPSWWKYI 150 (206)
T ss_pred cccHHHHHH
Confidence 344544433
No 215
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=32.44 E-value=26 Score=29.54 Aligned_cols=24 Identities=25% Similarity=0.477 Sum_probs=14.1
Q ss_pred EEEECCeEEEEeccCcCCCcEEEE
Q 002176 137 KVLRDGKWMEEDAAILVPGDIISV 160 (956)
Q Consensus 137 ~V~RdG~~~~I~~~~LvpGDiV~l 160 (956)
.|..||+...-.-..|.|||+|.+
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~ 57 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEI 57 (65)
T ss_dssp HHEETTB----SS----SSEEEEE
T ss_pred ceEECCEEccccCCcCCCCCEEEE
Confidence 367899999999999999999999
No 216
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=32.31 E-value=1.5e+02 Score=35.49 Aligned_cols=148 Identities=19% Similarity=0.193 Sum_probs=84.8
Q ss_pred ECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCCceeeccccCCcCeeeecCCCCccccCCeeccCc---------
Q 002176 140 RDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKGPGDSVYSGSTCKQGE--------- 210 (956)
Q Consensus 140 RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~l~VDeS~LTGES~pv~K~~g~~v~~Gs~v~~G~--------- 210 (956)
+-|....+...|.+|-|.+.++- ..-+|--.+.|++.-+.-.. |+.. ..|..++.|+....-.
T Consensus 53 ~~GDiv~v~~G~~iP~Dg~vl~g--~~~vdes~LTGEs~pv~k~~--g~~v----~~gs~~~~G~~~~~v~~~~~~s~~~ 124 (499)
T TIGR01494 53 VPGDIVLVKSGEIVPADGVLLSG--SCFVDESNLTGESVPVLKTA--GDAV----FAGTYVFNGTLIVVVSATGPNTFGG 124 (499)
T ss_pred CCCCEEEECCCCEeeeeEEEEEc--cEEEEcccccCCCCCeeecc--CCcc----ccCcEEeccEEEEEEEEeccccHHH
Confidence 45889999999999999998866 45557777777764444322 4432 4677888888654211
Q ss_pred EEEEEEEecchhHHHhHHHhhhcccccchHHHHH-HHHHHHHHHHHHHHHHHHHHhHhh--ccccCccchHHHHHHHHHh
Q 002176 211 IEAVVIATGVHTFFGKAAHLVDSTNQQGHFQKVL-TAIGNFCICSIAVGMIVEIIVMYP--IQHRKYRPGIDNLLVLLIG 287 (956)
Q Consensus 211 ~~~~V~~tG~~T~~gki~~l~~~~~~~~~l~~~~-~~i~~~~~~~i~i~~~~~~~~~~~--~~~~~~~~~~~~~l~llv~ 287 (956)
..+.++++|.+|. ..-.....+.. ..+..+++.+.++..+......+. .+...+..++..++...-+
T Consensus 125 ~i~~~v~~~~~~k----------~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~ 194 (499)
T TIGR01494 125 KIAVVVYTGFETK----------TPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPI 194 (499)
T ss_pred HHHHHHHhcCCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCC
Confidence 2334456666552 11112222332 333333322222222222222111 1234456667778888889
Q ss_pred hcCCchhHHHHHHHHHHH
Q 002176 288 GIPIAMPTVLSVTMAIGS 305 (956)
Q Consensus 288 ~iP~aLp~~~~v~~~~~~ 305 (956)
++|.++|+++..+.....
T Consensus 195 aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 195 ALPLAVTIALAVGDARLA 212 (499)
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 999999999998876554
No 217
>COG5547 Small integral membrane protein [Function unknown]
Probab=31.63 E-value=2.1e+02 Score=23.52 Aligned_cols=48 Identities=21% Similarity=0.353 Sum_probs=26.1
Q ss_pred HHHHHHhhHHH--HHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 002176 65 FLGFMWNPLSW--VMEAAAIMAIALANGGGKPPDWQDFVGIVTLLLINSTISFIEENN 120 (956)
Q Consensus 65 ~l~~~~~p~~~--~l~~aails~~~~~~~~~~~~~~~~~~ii~~~li~~~i~~~~e~~ 120 (956)
|+++++-|..- +.++.|++-+.++ -|- .+.++++.++...++++.+++
T Consensus 3 flk~fkypIIgglvglliAili~t~G-------fwK-tilviil~~lGv~iGl~~~r~ 52 (62)
T COG5547 3 FLKKFKYPIIGGLVGLLIAILILTFG-------FWK-TILVIILILLGVYIGLYKKRT 52 (62)
T ss_pred HHHHhccchHHHHHHHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHHhh
Confidence 56777777652 2222333333331 343 344455666777888887765
No 218
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=31.38 E-value=1.7e+02 Score=32.88 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=39.2
Q ss_pred EEEeccCCCCCccHHHHHHHHHhC----CCeEEEEcCCC---h-HHHHHHHHHhCCC
Q 002176 484 IGLMPLFDPPRHDSAETIRRALNL----GVNVKMITGDQ---L-AIAKETGRRLGMG 532 (956)
Q Consensus 484 lGli~~~D~lR~~~~~aI~~l~~a----GI~v~miTGD~---~-~tA~~ia~~lGi~ 532 (956)
=|.+.-.+++-+++.++++.|+.. |+++..+|-.. . ..+..+.+++|+.
T Consensus 8 DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 8 DGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred cCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 377777889999999999999998 99999999554 3 3466666778874
No 219
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=31.11 E-value=1.1e+02 Score=26.12 Aligned_cols=34 Identities=24% Similarity=0.103 Sum_probs=25.7
Q ss_pred CCcEEEEECCeEEEEec---cCcCCCcEEEEeCCCee
Q 002176 133 APKSKVLRDGKWMEEDA---AILVPGDIISVKLGDII 166 (956)
Q Consensus 133 ~~~~~V~RdG~~~~I~~---~~LvpGDiV~l~~Gd~V 166 (956)
...+.|-.+|..++++. .++.|||.|.+..|--+
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~Ai 52 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGFAI 52 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTEEE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecChhh
Confidence 35688889999999975 46889999999999543
No 220
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=30.95 E-value=3.6e+02 Score=28.22 Aligned_cols=60 Identities=15% Similarity=0.189 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEeec
Q 002176 107 LLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLEG 175 (956)
Q Consensus 107 ~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g 175 (956)
+++..+..+++.+...++.+.+.+....... +.. .-+.-|....+...|.+|-|.++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~----~v~r~~~~~~i~~~~L~~GDiI~l~~ 62 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKV----TVIRDGRWQKIPSSELVPGDIIILKA 62 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEE----EEEETTEEEEEEGGGT-TTSEEEEET
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccE----EEEeccccccchHhhccceeeeeccc
Confidence 3444445555555556666665544332221 101 12223566677777777777776643
No 221
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=30.61 E-value=4.6e+02 Score=31.86 Aligned_cols=70 Identities=16% Similarity=0.181 Sum_probs=50.5
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHH
Q 002176 496 DSAETIRRALNLGVNVKMITGDQL-AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~-~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~ 574 (956)
|+-.+++.+++.+=++.+++=.+. .-+..++.-+|+. ...+.-.++++=.
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~~~~~~~~~~~~l~~~-----------------------------i~~~~~~~~~e~~ 145 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQETIPALVAFQKTFNLR-----------------------------IEQRSYVTEEDAR 145 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 567777777777777777776663 4455666666653 2357778889999
Q ss_pred HHHHHHhhCCCEEEEEcCCcc
Q 002176 575 EIVKRLQARKHICGMTGDGVN 595 (956)
Q Consensus 575 ~iV~~lq~~g~~V~m~GDGvN 595 (956)
..|+.++++|..| .+||++-
T Consensus 146 ~~v~~lk~~G~~~-vvG~~~~ 165 (538)
T PRK15424 146 GQINELKANGIEA-VVGAGLI 165 (538)
T ss_pred HHHHHHHHCCCCE-EEcCchH
Confidence 9999999999655 6788853
No 222
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=29.36 E-value=18 Score=38.98 Aligned_cols=18 Identities=11% Similarity=0.495 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 002176 718 VILGGYLAMMTVIFFWAA 735 (956)
Q Consensus 718 ~~~G~~~~~~~~~~f~~~ 735 (956)
+.+|.++.++.++++++.
T Consensus 25 l~~~~llll~ail~w~~i 42 (381)
T PF05297_consen 25 LLFGLLLLLVAILVWFFI 42 (381)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 345555555554444433
No 223
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=29.32 E-value=3.9e+02 Score=28.89 Aligned_cols=52 Identities=23% Similarity=0.207 Sum_probs=43.2
Q ss_pred CCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCeEEEEcCCChHHHHHHHHH
Q 002176 477 SGGPWQFIGLMPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (956)
Q Consensus 477 ~e~~l~~lGli~~~D~lR~~~~~aI~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (956)
...+|.=+=+++=.+-+-||..++|+.++.. |..|.-.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 89 LGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred hCCCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 3556666677776777899999999999999 999997888999999988764
No 224
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=29.21 E-value=8.8e+02 Score=31.95 Aligned_cols=36 Identities=17% Similarity=0.385 Sum_probs=20.7
Q ss_pred CCcEEEEeCCCeeecceEEee-cCCceeeccccCCcC
Q 002176 154 PGDIISVKLGDIIPADARLLE-GDPLKIDQSALTGES 189 (956)
Q Consensus 154 pGDiV~l~~Gd~VPaD~~ll~-g~~l~VDeS~LTGES 189 (956)
-|-...+...|.+|=|.++++ |+.+-+|=-.+.|++
T Consensus 148 dg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~ 184 (997)
T TIGR01106 148 DGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184 (997)
T ss_pred CCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC
Confidence 355666666677777777664 333444555555544
No 225
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=28.84 E-value=24 Score=35.75 Aligned_cols=14 Identities=36% Similarity=0.245 Sum_probs=12.6
Q ss_pred EeeccccceeeCce
Q 002176 330 LCSDKTGTLTLNKL 343 (956)
Q Consensus 330 i~~DKTGTLT~n~m 343 (956)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 69999999999984
No 226
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=28.78 E-value=6.5e+02 Score=32.66 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=20.4
Q ss_pred CCeEEEEeccCcCCCcEEEEeCCCeeecceEEeecCC
Q 002176 141 DGKWMEEDAAILVPGDIISVKLGDIIPADARLLEGDP 177 (956)
Q Consensus 141 dG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~g~~ 177 (956)
-|....+..-|.+|-|.+.++..+ .=+|=-.+.|++
T Consensus 137 ~GDiv~l~~Gd~IPaDg~ii~g~~-l~VDES~LTGES 172 (884)
T TIGR01522 137 PGDLVCLSVGDRVPADLRIVEAVD-LSIDESNLTGET 172 (884)
T ss_pred cCCEEEecCCCEEeeeEEEEEcCc-eEEEcccccCCC
Confidence 366677777777777766666422 224444444444
No 227
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=28.65 E-value=2.8e+02 Score=28.37 Aligned_cols=71 Identities=23% Similarity=0.235 Sum_probs=37.0
Q ss_pred HHHHHHcCCCCCCCCHHHHHHHHHhcCCCccCcccccHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCChhhHHHH
Q 002176 24 EEVFETLRCNKEGLSTEAAEERLTIFGYNKLEEKQESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGI 103 (956)
Q Consensus 24 ~~~~~~l~~~~~GLt~~e~~~r~~~~G~N~l~~~~~~~~~~~l~~~~~p~~~~l~~aails~~~~~~~~~~~~~~~~~~i 103 (956)
+++..++. .+.+|.+|+.+|+++--.. ++.++.|...+. .-+.++.++++++ ++|.|...-
T Consensus 71 ~~l~~~~~--~~~~~~~ea~~~L~~I~~~---~~~y~~~~~~l~--------~~l~~~~fa~lfg------g~~~~~~~a 131 (193)
T PF06738_consen 71 NRLSRRIV--AGQLSLEEAIERLDEIDRE---PPRYPPWLVILA--------AGLASAAFALLFG------GSWIDMIVA 131 (193)
T ss_pred HHHHHHHh--cCCCCHHHHHHHHHHHhhC---CCCCCHHHHHHH--------HHHHHHHHHHHHC------CCHHHHHHH
Confidence 44444433 4689999999999873221 124666654432 1223333344332 467776554
Q ss_pred HHHHHHHHHH
Q 002176 104 VTLLLINSTI 113 (956)
Q Consensus 104 i~~~li~~~i 113 (956)
.++-++...+
T Consensus 132 ~i~g~~~~~~ 141 (193)
T PF06738_consen 132 FILGLLVGLL 141 (193)
T ss_pred HHHHHHHHHH
Confidence 4443333333
No 228
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.59 E-value=2.5e+02 Score=31.11 Aligned_cols=137 Identities=13% Similarity=0.155 Sum_probs=75.4
Q ss_pred CCCCCccHHHHHHHHHhC-CCeE---EEEcCCChHH------HHHHHHHhCCCCCCCC--C-----------------cc
Q 002176 490 FDPPRHDSAETIRRALNL-GVNV---KMITGDQLAI------AKETGRRLGMGTNMYP--S-----------------SA 540 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~a-GI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~--~-----------------~~ 540 (956)
...+|++.++.++.+++. |++. .++.||+++. -...|+++||....+. . ..
T Consensus 10 A~~i~~~l~~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~~l~~~I~~lN~d~~ 89 (286)
T PRK14184 10 AATIREELKTEVAALTARHGRAPGLAVILVGEDPASQVYVRNKERACEDAGIVSEAFRLPADTTQEELEDLIAELNARPD 89 (286)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCc
Confidence 345778888889988776 7753 5667888753 3456677888532110 0 00
Q ss_pred ccCC--------cccc--------------ccCcccHHHHhhhcceEEeeChhhHHHHHHHHh--hCCCEEEEEcCCcc-
Q 002176 541 LLGQ--------NKDE--------------SIVALPVDELIEKADGFAGVFPEHKYEIVKRLQ--ARKHICGMTGDGVN- 595 (956)
Q Consensus 541 l~g~--------~~~~--------------~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq--~~g~~V~m~GDGvN- 595 (956)
+.|- +.++ .+...++..+...-..|.=|||.-=.++++.++ -.|..|.++|-+..
T Consensus 90 V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iV 169 (286)
T PRK14184 90 IDGILLQLPLPKGLDSQRCLELIDPAKDVDGFHPENMGRLALGLPGFRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIV 169 (286)
T ss_pred CceEEEecCCCCCCCHHHHHhccCcccCcccCCHhhHHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0000 0000 001111222222233466778877777777664 24899999998853
Q ss_pred ---Chhhhcc------CCeeEEeccccHH--HhhccceeecC
Q 002176 596 ---DAPALKK------ADIGIAVADATDA--ARSASDIVLTE 626 (956)
Q Consensus 596 ---DapALk~------AdVGIamg~gtd~--Ak~aADivL~~ 626 (956)
=+-+|.+ |.|-++-....+. .-..||+++..
T Consensus 170 G~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 170 GKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred hHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 1224433 6666666543332 33478988854
No 229
>cd01516 FBPase_glpX Bacterial fructose-1,6-bisphosphatase, glpX-encoded. A dimeric enzyme dependent on Mg(2+). glpX-encoded FPBase (FBPase class II) differs from other members of the inositol-phosphatase superfamily by permutation of secondary structure elements. The core structure around the active site is well preserved. In E. coli, FBPase II is part of the glp regulon, which mediates growth on glycerol or sn-glycerol 3-phosphate as the sole carbon source.
Probab=28.27 E-value=1.7e+02 Score=32.32 Aligned_cols=107 Identities=20% Similarity=0.266 Sum_probs=56.7
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002176 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
+.+-|.||+ .+.|+++|++|.+|+++|--...-|...+ ++......-.=.|...+.-+....+. ....+..+
T Consensus 158 V~vLdRpRH--~~lI~eiR~~Gari~Li~DGDV~~ai~~~----~~~s~vD~~~GiGGaPEGVlaAaAlk--clGG~~qg 229 (309)
T cd01516 158 VVVLDRPRH--AALIEEIREAGARIKLIPDGDVAAAIATA----LPGSGVDVLMGIGGAPEGVLAAAALK--CLGGEMQG 229 (309)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh----CCCCCeeEEEECCCChHHHHHHHHHH--hCCceeEE
Confidence 455688887 58999999999999999854555555444 22111100000111111100000000 01123567
Q ss_pred eeChhhHHHHHHHHhh---------------CCCEEEEEcCCccChhhhc
Q 002176 567 GVFPEHKYEIVKRLQA---------------RKHICGMTGDGVNDAPALK 601 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~---------------~g~~V~m~GDGvNDapALk 601 (956)
|+-|....+.-+..+. +|.-|.++.-|+.|...|+
T Consensus 230 rL~~~~~~e~~r~~~~Gi~D~~ki~~~ddLv~gd~v~FaATGvTdG~lL~ 279 (309)
T cd01516 230 RLLPRNEEERARAREMGITDPNKILTLDDLVRGDDVVFAATGITDGELLK 279 (309)
T ss_pred EECCCCHHHHHHHHHcCCCChhheeEHHHcccCCCEEEEEeCCCCCCccC
Confidence 7766554443322221 2456888889999998887
No 230
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=27.84 E-value=32 Score=30.45 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=16.4
Q ss_pred EeccCcCCCcEEEEe-CCCeeec
Q 002176 147 EDAAILVPGDIISVK-LGDIIPA 168 (956)
Q Consensus 147 I~~~~LvpGDiV~l~-~Gd~VPa 168 (956)
+.-.+|.+||.|.+. +||+||-
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHcCCCCCCEEEEEECCCccce
Confidence 345789999999885 8999995
No 231
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=27.67 E-value=1e+02 Score=34.76 Aligned_cols=58 Identities=29% Similarity=0.416 Sum_probs=39.6
Q ss_pred HHHHHHHhhCCCEEEEEcCCc--------------------cChhhhccC--CeeEEecc----ccHHHhh--ccceeec
Q 002176 574 YEIVKRLQARKHICGMTGDGV--------------------NDAPALKKA--DIGIAVAD----ATDAARS--ASDIVLT 625 (956)
Q Consensus 574 ~~iV~~lq~~g~~V~m~GDGv--------------------NDapALk~A--dVGIamg~----gtd~Ak~--aADivL~ 625 (956)
..+++.|+++|..|+.+.=|. .|-|+|=+- ++.+.++. +...+.+ .+|++|+
T Consensus 69 ~~L~~~l~~~g~~~~ilsRGYg~~~~~~~~~v~~~~~~~~~GDEp~lla~~~~~~V~V~~dR~~~~~~~~~~~~~dviil 148 (325)
T PRK00652 69 IALAEQLQARGLKPGVVSRGYGGKLEKGPLLVDPDHTAAEVGDEPLLIARRTGAPVAVSPDRVAAARALLAAHGADIIIL 148 (325)
T ss_pred HHHHHHHHHCCCeEEEECCCCCCCcCCCCEEeCCCCChhhhCcHHHHhccCCCceEEEcCcHHHHHHHHHhcCCCCEEEE
Confidence 356788899999999884332 366765433 67777762 3344433 5899999
Q ss_pred CCChhH
Q 002176 626 EPGLSV 631 (956)
Q Consensus 626 ~~~~~~ 631 (956)
||+|..
T Consensus 149 DDGfQh 154 (325)
T PRK00652 149 DDGLQH 154 (325)
T ss_pred cCCccC
Confidence 999975
No 232
>PRK00208 thiG thiazole synthase; Reviewed
Probab=27.64 E-value=4.4e+02 Score=28.52 Aligned_cols=52 Identities=23% Similarity=0.193 Sum_probs=43.2
Q ss_pred CCCCceEEEEeccCCCCCccHHHHHHHHHhC---CCeEEEEcCCChHHHHHHHHH
Q 002176 477 SGGPWQFIGLMPLFDPPRHDSAETIRRALNL---GVNVKMITGDQLAIAKETGRR 528 (956)
Q Consensus 477 ~e~~l~~lGli~~~D~lR~~~~~aI~~l~~a---GI~v~miTGD~~~tA~~ia~~ 528 (956)
.+.+|.=+=+++=.+-+-||..++++.++.. |..|.=.+-|++..|++++.-
T Consensus 89 ~~~~~iKlEVi~d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~ak~l~~~ 143 (250)
T PRK00208 89 LGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEA 143 (250)
T ss_pred hCCCeEEEEEecCCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 4566777777777777899999999999999 999997788888889888754
No 233
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=27.52 E-value=1e+02 Score=31.35 Aligned_cols=41 Identities=20% Similarity=0.221 Sum_probs=31.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEc-CCChHHHHHHHHHhCCC
Q 002176 492 PPRHDSAETIRRALNLGVNVKMIT-GDQLAIAKETGRRLGMG 532 (956)
Q Consensus 492 ~lR~~~~~aI~~l~~aGI~v~miT-GD~~~tA~~ia~~lGi~ 532 (956)
.+-||+++.++.|++.|+++.+.| -|.+..|+++=+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 356899999999999999999999 58899999999999986
No 234
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=27.21 E-value=6.2e+02 Score=27.53 Aligned_cols=85 Identities=18% Similarity=0.221 Sum_probs=43.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEE-EcCCC-hHHHHHHHHHh-CCCCCCCCCccccCCccccccCcccHHHHhhhcceEEe
Q 002176 491 DPPRHDSAETIRRALNLGVNVKM-ITGDQ-LAIAKETGRRL-GMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAG 567 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~m-iTGD~-~~tA~~ia~~l-Gi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar 567 (956)
|=|-++..+.++.|++.|+..+. +|-.. .+..+.+++.. |... .....-.+|.. .
T Consensus 125 DLp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~s~gfIY-~vs~~GvTG~~---------------------~ 182 (258)
T PRK13111 125 DLPPEEAEELRAAAKKHGLDLIFLVAPTTTDERLKKIASHASGFVY-YVSRAGVTGAR---------------------S 182 (258)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCcEE-EEeCCCCCCcc---------------------c
Confidence 33336777777778888876443 66555 34555555543 1110 00000112211 1
Q ss_pred eChhhHHHHHHHHhhCCCEEEEEcCCccCh
Q 002176 568 VFPEHKYEIVKRLQARKHICGMTGDGVNDA 597 (956)
Q Consensus 568 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa 597 (956)
-.|++=.+.++.+++....-.++|=|+++.
T Consensus 183 ~~~~~~~~~i~~vk~~~~~pv~vGfGI~~~ 212 (258)
T PRK13111 183 ADAADLAELVARLKAHTDLPVAVGFGISTP 212 (258)
T ss_pred CCCccHHHHHHHHHhcCCCcEEEEcccCCH
Confidence 123444567777777644555679998653
No 235
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=27.11 E-value=62 Score=29.71 Aligned_cols=32 Identities=19% Similarity=0.387 Sum_probs=26.2
Q ss_pred CcEEEEECCeEEEEeccCcCCCcEEEEeCCCee
Q 002176 134 PKSKVLRDGKWMEEDAAILVPGDIISVKLGDII 166 (956)
Q Consensus 134 ~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~V 166 (956)
..-+|.-||+.. -++.++++||+|.|.-|...
T Consensus 32 ~~GrV~vNG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 32 EGGRVKVNGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HCCeEEECCEEc-ccccccCCCCEEEEEeCCcE
Confidence 345677788877 79999999999999988754
No 236
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=27.08 E-value=1.5e+02 Score=29.90 Aligned_cols=58 Identities=14% Similarity=0.200 Sum_probs=42.7
Q ss_pred CchHHHHHHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCCeEEEEcCCC
Q 002176 439 NKSEIERRVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQ 518 (956)
Q Consensus 439 ~~~~~~~~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~ 518 (956)
++.....-+..+++.+++.|--.++++... =-+.+-++++.+++.|++|+-+||.+
T Consensus 91 NDy~yd~vFsRqveA~g~~GDvLigISTSG------------------------NS~nVl~Ai~~Ak~~gm~vI~ltG~~ 146 (176)
T COG0279 91 NDYGYDEVFSRQVEALGQPGDVLIGISTSG------------------------NSKNVLKAIEAAKEKGMTVIALTGKD 146 (176)
T ss_pred ccccHHHHHHHHHHhcCCCCCEEEEEeCCC------------------------CCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 333344556677788888887777766432 12578999999999999999999987
Q ss_pred hH
Q 002176 519 LA 520 (956)
Q Consensus 519 ~~ 520 (956)
--
T Consensus 147 GG 148 (176)
T COG0279 147 GG 148 (176)
T ss_pred Cc
Confidence 43
No 237
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=26.29 E-value=8.2 Score=46.20 Aligned_cols=173 Identities=10% Similarity=-0.008 Sum_probs=108.4
Q ss_pred eEEEEeccCCCCCccHHHHHHHHHhCCCeEEEE------------------------cCCC--hHHHHHH--HHHhCCCC
Q 002176 482 QFIGLMPLFDPPRHDSAETIRRALNLGVNVKMI------------------------TGDQ--LAIAKET--GRRLGMGT 533 (956)
Q Consensus 482 ~~lGli~~~D~lR~~~~~aI~~l~~aGI~v~mi------------------------TGD~--~~tA~~i--a~~lGi~~ 533 (956)
..+-++--.+++++.+.++|+++.+.|.|-.=+ +=|. ..+|..+ |..+|..-
T Consensus 432 qil~l~~~~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~V 511 (942)
T KOG0205|consen 432 QILKLCNEDHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 511 (942)
T ss_pred HHHHHhhccCcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhcccee
Confidence 445566778899999999999998888763222 1121 1233333 33344321
Q ss_pred CCCCCccccCCccc------------------cccCcccHHHHhhhcceEEeeChhhHHHHHHHHhhCCCEEEEEcCCcc
Q 002176 534 NMYPSSALLGQNKD------------------ESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595 (956)
Q Consensus 534 ~~~~~~~l~g~~~~------------------~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvN 595 (956)
..++|+... ..+.+.+.++-++...++.-+.|.|+..-|--.++.+.+..+.++|.+
T Consensus 512 -----kmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi 586 (942)
T KOG0205|consen 512 -----KMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHI 586 (942)
T ss_pred -----eeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCce
Confidence 222222111 011122233444455677777888888888888888888899999999
Q ss_pred ChhhhccCCeeEEeccccHHHhhccceeecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 596 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIR 659 (956)
Q Consensus 596 DapALk~AdVGIamg~gtd~Ak~aADivL~~~~~~~iv~ai~~gR~~~~~i~~~i~~~~~~ni~ 659 (956)
+++-...+|=+.|+..+.....-+.+..-..+..+-+...-..|+.+...+....+|.-.+|..
T Consensus 587 ~gmtgdgvndapaLKkAdigiava~atdaar~asdiVltepglSviI~avltSraIfqrmknyt 650 (942)
T KOG0205|consen 587 VGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYT 650 (942)
T ss_pred ecccCCCcccchhhcccccceeeccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhhe
Confidence 9999999888888864433332223333334444445556667899999888888888777764
No 238
>PLN03190 aminophospholipid translocase; Provisional
Probab=26.28 E-value=5.7e+02 Score=34.34 Aligned_cols=65 Identities=9% Similarity=0.096 Sum_probs=31.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---cEEE----EECCeEEEEeccCcCCCcEEEEe
Q 002176 97 WQDFVGIVTLLLINSTISFIEENNAGNAAAALMASLAP---KSKV----LRDGKWMEEDAAILVPGDIISVK 161 (956)
Q Consensus 97 ~~~~~~ii~~~li~~~i~~~~e~~a~~~~~~l~~~~~~---~~~V----~RdG~~~~I~~~~LvpGDiV~l~ 161 (956)
+...+.++++..+...++.+..+++++........... ...+ ++-|....+...|.+|-|.+.+.
T Consensus 140 ~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~ 211 (1178)
T PLN03190 140 ILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLS 211 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEe
Confidence 34445555555555555555555555554433322110 1111 23355555555555555555554
No 239
>PF15584 Imm44: Immunity protein 44
Probab=25.49 E-value=33 Score=30.79 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=16.5
Q ss_pred CCcEEEEeCCCeeecceEEe
Q 002176 154 PGDIISVKLGDIIPADARLL 173 (956)
Q Consensus 154 pGDiV~l~~Gd~VPaD~~ll 173 (956)
+.+-..|+.|++|||||+--
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 45667899999999999973
No 240
>PRK04980 hypothetical protein; Provisional
Probab=25.33 E-value=1.1e+02 Score=28.46 Aligned_cols=58 Identities=24% Similarity=0.375 Sum_probs=41.2
Q ss_pred CCcEEEEECCeEEEEeccCcCCCcEEEEe--CCCeeecceEEeecCCceeec-----cccCCcCeeeecC
Q 002176 133 APKSKVLRDGKWMEEDAAILVPGDIISVK--LGDIIPADARLLEGDPLKIDQ-----SALTGESLPVTKG 195 (956)
Q Consensus 133 ~~~~~V~RdG~~~~I~~~~LvpGDiV~l~--~Gd~VPaD~~ll~g~~l~VDe-----S~LTGES~pv~K~ 195 (956)
..|..-+||+. .+..+|||++.+. .+++.-|+..+++-..+..|| +..-|+|.+.-|.
T Consensus 18 GkKTiTiRd~s-----e~~~~~G~~~~V~~~e~g~~~c~ieI~sV~~i~f~eLte~hA~qEg~sL~elk~ 82 (102)
T PRK04980 18 GRKTITIRDES-----ESHFKPGDVLRVGTFEDDRYFCTIEVLSVSPVTFDELNEKHAEQENMTLPELKQ 82 (102)
T ss_pred CCceEEeeCCc-----ccCCCCCCEEEEEECCCCcEEEEEEEEEEEEEehhhCCHHHHHHhCCCHHHHHH
Confidence 35666778853 3579999999997 788899999999866544443 3455776665554
No 241
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=24.81 E-value=1.4e+02 Score=30.21 Aligned_cols=81 Identities=20% Similarity=0.311 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHcCCeEEEEEEeecCCCCccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC---eEEEEcCCChHHH
Q 002176 446 RVHAIIDKFAERGLRSLAVAYQEVPDGRKESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV---NVKMITGDQLAIA 522 (956)
Q Consensus 446 ~~~~~i~~~a~~G~RvlavA~~~l~~~~~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI---~v~miTGD~~~tA 522 (956)
++.+-++++...|.+++.++-.. +.....=..-+|+=.+.---+|-...-=+.|++.++ +|+|+ ||+.-|=
T Consensus 50 e~~~W~~e~k~~gi~v~vvSNn~-----e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmV-GDqL~TD 123 (175)
T COG2179 50 ELRAWLAELKEAGIKVVVVSNNK-----ESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMV-GDQLFTD 123 (175)
T ss_pred HHHHHHHHHHhcCCEEEEEeCCC-----HHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEE-cchhhhh
Confidence 34455678899999999887421 111111112233333334455555555556666676 47777 9999999
Q ss_pred HHHHHHhCCC
Q 002176 523 KETGRRLGMG 532 (956)
Q Consensus 523 ~~ia~~lGi~ 532 (956)
.--|++.|+-
T Consensus 124 Vlggnr~G~~ 133 (175)
T COG2179 124 VLGGNRAGMR 133 (175)
T ss_pred hhcccccCcE
Confidence 9999999984
No 242
>PRK12415 fructose 1,6-bisphosphatase II; Reviewed
Probab=24.72 E-value=2.1e+02 Score=31.93 Aligned_cols=107 Identities=16% Similarity=0.153 Sum_probs=56.7
Q ss_pred eccCCCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEE
Q 002176 487 MPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFA 566 (956)
Q Consensus 487 i~~~D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfa 566 (956)
+.+-|.||+ .+.|+++|++|.+|++++--...-|...+ ++......-.=.|...+.-+....+. ...-+..+
T Consensus 159 V~vLdRpRH--~~lI~eir~~Gari~Li~DGDV~~ai~~~----~~~~~vD~~~GiGGaPEGVlaAaAlk--clGG~~q~ 230 (322)
T PRK12415 159 VIVQERERH--QDIIDRVRAKGARVKLFGDGDVGASIATA----LPGTGIDLFVGIGGAPEGVISAAALK--CLGGEMQA 230 (322)
T ss_pred EEEEcCchH--HHHHHHHHHcCCeEEEeccccHHHHHHHh----CCCCCeeEEEEcCCChHHHHHHHHHH--hCCceeEE
Confidence 456688887 58899999999999999854454455444 22111000000111111000000000 01123567
Q ss_pred eeChhhHHHHHHHHhh---------------CCCEEEEEcCCccChhhhc
Q 002176 567 GVFPEHKYEIVKRLQA---------------RKHICGMTGDGVNDAPALK 601 (956)
Q Consensus 567 r~~Pe~K~~iV~~lq~---------------~g~~V~m~GDGvNDapALk 601 (956)
|+.|....+.-+..+. +|.-|.++.-|+.|...|+
T Consensus 231 rL~~~~~~e~~r~~~~Gi~D~~~v~~~ddlv~gd~v~FaATGvTdG~ll~ 280 (322)
T PRK12415 231 RLVPMNEEEEARCREMGLEDPRQLLMLDDLVSGDDAIFSATGVSAGELLD 280 (322)
T ss_pred EECCCCHHHHHHHHHcCCcChhheeEHHHccCCCCEEEEEeCCCCCCCcC
Confidence 7766554433222221 2556889999999999998
No 243
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=24.41 E-value=58 Score=34.83 Aligned_cols=91 Identities=18% Similarity=0.147 Sum_probs=49.5
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhc--c--eEEeeC
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKA--D--GFAGVF 569 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~--~--vfar~~ 569 (956)
-++..++++.+++.|++. ++|......+.......|.. .+...++.+ + .+..-.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g---------------------~~~~~i~~~g~~~~~~gKP~ 197 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG---------------------YYAELIKQLGGKVIYSGKPY 197 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc---------------------HHHHHHHHhCCcEecCCCCC
Confidence 478899999998899997 77776554443222222221 011111100 0 111112
Q ss_pred hhhHHHHHHHHhhC-CCEEEEEcCC-ccChhhhccCCee
Q 002176 570 PEHKYEIVKRLQAR-KHICGMTGDG-VNDAPALKKADIG 606 (956)
Q Consensus 570 Pe~K~~iV~~lq~~-g~~V~m~GDG-vNDapALk~AdVG 606 (956)
|+-=....+.+... ...+.|+||. .+|..+=++|++-
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 198 PAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGID 236 (242)
T ss_pred HHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCe
Confidence 22223344444322 3469999999 5999888887764
No 244
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=24.23 E-value=1.2e+02 Score=30.28 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=36.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 491 DPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 491 D~lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
=.+||++.+.+++|++. +++.+.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35899999999999955 999999999999999999999864
No 245
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.17 E-value=1.6e+02 Score=32.55 Aligned_cols=45 Identities=16% Similarity=0.268 Sum_probs=32.3
Q ss_pred cCCCCCccHHHHHHHHHhCCCeE---EEEcCCChHHH------HHHHHHhCCCC
Q 002176 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAIA------KETGRRLGMGT 533 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~v---~miTGD~~~tA------~~ia~~lGi~~ 533 (956)
+.+.++++.++.++.+++.|++. .++-||+++.. ...|+++|+..
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~ 64 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMIS 64 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 44567888999999998888764 45579887543 45567788853
No 246
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=24.13 E-value=1.4e+02 Score=32.01 Aligned_cols=68 Identities=22% Similarity=0.332 Sum_probs=45.9
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCCh-HHH---------HHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcc
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQL-AIA---------KETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKAD 563 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~-~tA---------~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 563 (956)
++-.++-|+.+|++||.| .||+.. +.| .+-|+++|+.. ..+ .+
T Consensus 40 ~~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~-----IEi--------------------S~ 92 (237)
T TIGR03849 40 RDIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEA-----VEI--------------------SD 92 (237)
T ss_pred HHHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCE-----EEE--------------------cC
Confidence 345789999999999775 489743 221 12455666531 111 13
Q ss_pred eEEeeChhhHHHHHHHHhhCCCEEE
Q 002176 564 GFAGVFPEHKYEIVKRLQARKHICG 588 (956)
Q Consensus 564 vfar~~Pe~K~~iV~~lq~~g~~V~ 588 (956)
.+-.+.+++|.++|+..++.|-.|.
T Consensus 93 G~~~i~~~~~~rlI~~~~~~g~~v~ 117 (237)
T TIGR03849 93 GSMEISLEERCNLIERAKDNGFMVL 117 (237)
T ss_pred CccCCCHHHHHHHHHHHHhCCCeEe
Confidence 4667889999999999999987765
No 247
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=23.64 E-value=1.7e+02 Score=32.54 Aligned_cols=38 Identities=26% Similarity=0.313 Sum_probs=26.3
Q ss_pred ccHHHHHHHHHhCCCeEEEEcCCChHH-HHHHHHHhCCC
Q 002176 495 HDSAETIRRALNLGVNVKMITGDQLAI-AKETGRRLGMG 532 (956)
Q Consensus 495 ~~~~~aI~~l~~aGI~v~miTGD~~~t-A~~ia~~lGi~ 532 (956)
+++...-+.|+..|.+++++|.+.... -++..+.++..
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 356666788889999999999776543 34444555553
No 248
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=23.52 E-value=6.1e+02 Score=23.65 Aligned_cols=27 Identities=15% Similarity=0.217 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCcEEEEE
Q 002176 114 SFIEENNAGNAAAALMASLAPKSKVLR 140 (956)
Q Consensus 114 ~~~~e~~a~~~~~~l~~~~~~~~~V~R 140 (956)
.+...+|.++..+++.+.+.+--+|+-
T Consensus 35 ~~RpqkK~~k~~~~~~~~Lk~Gd~VvT 61 (106)
T PRK05585 35 IIRPQQKRQKEHKKMLSSLAKGDEVVT 61 (106)
T ss_pred hccHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 334455555556666665555555544
No 249
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=23.50 E-value=89 Score=29.24 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=54.1
Q ss_pred HHHHHcCCeEEEEEEeecCCCC--ccCCCCCceEEEEeccCCCCCccHHHHHHHHHhCCC-eE-EEEcCCChHHHHHHHH
Q 002176 452 DKFAERGLRSLAVAYQEVPDGR--KESSGGPWQFIGLMPLFDPPRHDSAETIRRALNLGV-NV-KMITGDQLAIAKETGR 527 (956)
Q Consensus 452 ~~~a~~G~RvlavA~~~l~~~~--~~~~e~~l~~lGli~~~D~lR~~~~~aI~~l~~aGI-~v-~miTGD~~~tA~~ia~ 527 (956)
.-+...|++|+.+... ++.++ ..-.+.+..++|+-...++.-+.+++.++.+|+.+- ++ +++-|-....-.+.++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3466799999776632 33221 112345567889888878888999999999999976 54 5677765544345677
Q ss_pred HhCCC
Q 002176 528 RLGMG 532 (956)
Q Consensus 528 ~lGi~ 532 (956)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 77763
No 250
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=23.34 E-value=7.5e+02 Score=29.97 Aligned_cols=101 Identities=18% Similarity=0.158 Sum_probs=67.2
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHhCCCCCCCCCccccCCccccccCcccHHHHhhhcceEEeeChhhHH
Q 002176 496 DSAETIRRALNLGVNVKMITGDQL-AIAKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKY 574 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~-~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~ 574 (956)
|+-.+++.+++.+=++.+++=.+. ..+..++.-+++. ..++.-.++++=.
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~~~~~~~~~~~ll~~~-----------------------------i~~~~~~~~~e~~ 135 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQDTPPALRRFQAAFNLD-----------------------------IVQRSYVTEEDAR 135 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCcccHHHHHHHHHhCCc-----------------------------eEEEEecCHHHHH
Confidence 567777777777777777766553 4466666666653 2357778889999
Q ss_pred HHHHHHhhCCCEEEEEcCCccChhhhccCCeeEEeccccHHHhhc-cceeecCCChhHHHHHHHHHHHHHH
Q 002176 575 EIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSA-SDIVLTEPGLSVIISAVLTSRAIFQ 644 (956)
Q Consensus 575 ~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIamg~gtd~Ak~a-ADivL~~~~~~~iv~ai~~gR~~~~ 644 (956)
..|+.++++|..+ ++||++- ++.|++. -.-|+..+. .+|..++.+....++
T Consensus 136 ~~~~~l~~~G~~~-viG~~~~-----------------~~~A~~~gl~~ili~s~-esi~~a~~~A~~~~~ 187 (526)
T TIGR02329 136 SCVNDLRARGIGA-VVGAGLI-----------------TDLAEQAGLHGVFLYSA-DSVRQAFDDALDVAR 187 (526)
T ss_pred HHHHHHHHCCCCE-EECChHH-----------------HHHHHHcCCceEEEecH-HHHHHHHHHHHHHHH
Confidence 9999999999655 6788843 2333322 233444444 888888888777654
No 251
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.26 E-value=1.8e+02 Score=32.23 Aligned_cols=45 Identities=16% Similarity=0.256 Sum_probs=33.0
Q ss_pred cCCCCCccHHHHHHHHHhCCCe---EEEEcCCChHH------HHHHHHHhCCCC
Q 002176 489 LFDPPRHDSAETIRRALNLGVN---VKMITGDQLAI------AKETGRRLGMGT 533 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~---v~miTGD~~~t------A~~ia~~lGi~~ 533 (956)
+.+.++++.++-|+.+++.|++ +.+..||+++. ....|+++|+..
T Consensus 10 iA~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (284)
T PRK14170 10 LAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKS 63 (284)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456788899999999888886 45677998754 345567788853
No 252
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=23.20 E-value=5e+02 Score=28.96 Aligned_cols=33 Identities=27% Similarity=0.358 Sum_probs=25.6
Q ss_pred cHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 496 DSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 496 ~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
|+..++.+. +..+|+=|...++..+.|+..+++
T Consensus 91 DTArVLsr~----~D~I~~R~~~~~~ve~lA~~s~VP 123 (310)
T COG0078 91 DTARVLSRM----VDAIMIRGFSHETLEELAKYSGVP 123 (310)
T ss_pred HHHHHHHhh----hheEEEecccHHHHHHHHHhCCCc
Confidence 455555444 467899999999999999998875
No 253
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.52 E-value=3.2e+02 Score=30.13 Aligned_cols=64 Identities=17% Similarity=0.295 Sum_probs=39.8
Q ss_pred ceEEeeChhhHHHHHHHHhh--CCCEEEEEcCCc-cChh---hhcc--CCeeEEeccccHH--HhhccceeecC
Q 002176 563 DGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGV-NDAP---ALKK--ADIGIAVADATDA--ARSASDIVLTE 626 (956)
Q Consensus 563 ~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGv-NDap---ALk~--AdVGIamg~gtd~--Ak~aADivL~~ 626 (956)
..|.=+||.-=.++++.+.- .|..|..+|-+. -=-| +|.. |.|-++-....+. .-..||+++.-
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLKAELRQADILVSA 202 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHHHHHhhCCEEEEC
Confidence 34667788777777776643 489999999993 3444 5543 4555555433222 22478888854
No 254
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.36 E-value=2e+02 Score=31.81 Aligned_cols=137 Identities=12% Similarity=0.130 Sum_probs=73.4
Q ss_pred CCCCCccHHHHHHHHHhCCCe---EEEEcCCChHH------HHHHHHHhCCCCCCCCC-------------------ccc
Q 002176 490 FDPPRHDSAETIRRALNLGVN---VKMITGDQLAI------AKETGRRLGMGTNMYPS-------------------SAL 541 (956)
Q Consensus 490 ~D~lR~~~~~aI~~l~~aGI~---v~miTGD~~~t------A~~ia~~lGi~~~~~~~-------------------~~l 541 (956)
.++++++.++.++.+++.|++ ..++-||+++. -...|+++|+....+.- ..+
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 356788899999999887876 35667888754 34556778885321100 000
Q ss_pred cCC----ccccc------------------cCcccHHHHhhhcceEEeeChhhHHHHHHHHhh--CCCEEEEEcCCcc--
Q 002176 542 LGQ----NKDES------------------IVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN-- 595 (956)
Q Consensus 542 ~g~----~~~~~------------------~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN-- 595 (956)
.|- .+... +...++..+...-..|.=|||.-=.++++.+.- .|+.|.++|.+..
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 169 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVG 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccch
Confidence 000 00000 011112223222334566778777777776642 5899999998843
Q ss_pred --Chhhhcc--CCeeEEeccccHH--HhhccceeecC
Q 002176 596 --DAPALKK--ADIGIAVADATDA--ARSASDIVLTE 626 (956)
Q Consensus 596 --DapALk~--AdVGIamg~gtd~--Ak~aADivL~~ 626 (956)
=+-+|.. |.|-++-....+. .-..|||++.-
T Consensus 170 kPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 170 RPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 2234444 4444443322222 22468888754
No 255
>PF03453 MoeA_N: MoeA N-terminal region (domain I and II); InterPro: IPR005110 This entry represents the N-terminal and linker domains of the MoeA protein. Proteins in this family contain two structural domains, one of which contains the conserved DGXA motif. These two domains are found in proteins involved in biosynthesis of molybdopterin cofactor however the exact molecular function of this region is uncertain. The majority of molybdenum-containing enzymes utilise a molybdenum cofactor (MoCF or Moco) consisting of a Mo atom coordinated via a cis-dithiolene moiety to molybdopterin (MPT). MoCF is ubiquitous in nature, and the pathway for MoCF biosynthesis is conserved in all three domains of life. MoCF-containing enzymes function as oxidoreductases in carbon, nitrogen, and sulphur metabolism [, ]. In Escherichia coli, biosynthesis of MoCF is a three stage process. It begins with the MoaA and MoaC conversion of GTP to the meta-stable pterin intermediate precursor Z. The second stage involves MPT synthase (MoaD and MoaE), which converts precursor Z to MPT; MoeB is involved in the recycling of MPT synthase. The final step in MoCF synthesis is the attachment of mononuclear Mo to MPT, a process that requires MoeA and which is enhanced by MogA in an Mg2 ATP-dependent manner []. MoCF is the active co-factor in eukaryotic and some prokaryotic molybdo-enzymes, but the majority of bacterial enzymes requiring MoCF, need a modification of MTP for it to be active; MobA is involved in the attachment of a nucleotide monophosphate to MPT resulting in the MGD co-factor, the active co-factor for most prokaryotic molybdo-enzymes. Bacterial two-hybrid studies have revealed the close interactions between MoeA, MogA, and MobA in the synthesis of MoCF []. Moreover the close functional association of MoeA and MogA in the synthesis of MoCF is supported by fact that the known eukaryotic homologues to MoeA and MogA exist as fusion proteins: CNX1 (Q39054 from SWISSPROT) of Arabidopsis thaliana (Mouse-ear cress), mammalian Gephryin (e.g. Q9NQX3 from SWISSPROT) and Drosophila melanogaster (Fruit fly) Cinnamon (P39205 from SWISSPROT) [].; GO: 0032324 molybdopterin cofactor biosynthetic process; PDB: 1UZ5_A 1T3E_B 2FTS_A 2FU3_A 1XI8_A 1WU2_A 2NRS_A 2NRP_B 2NRO_A 2NQV_A ....
Probab=22.19 E-value=1e+02 Score=30.92 Aligned_cols=57 Identities=26% Similarity=0.464 Sum_probs=31.2
Q ss_pred ccCcCCCcEEEEeCCCeee--cceEEeecCCceeeccccCCcCeeeecC--C-CCccccCCeeccCcE
Q 002176 149 AAILVPGDIISVKLGDIIP--ADARLLEGDPLKIDQSALTGESLPVTKG--P-GDSVYSGSTCKQGEI 211 (956)
Q Consensus 149 ~~~LvpGDiV~l~~Gd~VP--aD~~ll~g~~l~VDeS~LTGES~pv~K~--~-g~~v~~Gs~v~~G~~ 211 (956)
...|.+|.-+.+..|..+| ||++|-.-+. .+.+. .+-+.+. + .++-..|+-+..|+.
T Consensus 81 ~~~l~~g~av~I~TGa~vP~g~DaVV~~E~~-~~~~~-----~i~i~~~~~~g~nIr~~G~di~~G~~ 142 (162)
T PF03453_consen 81 PIPLQPGEAVRIMTGAPVPEGADAVVPIEDT-EVEGD-----EIRILKPVKPGQNIRPKGEDIKKGEV 142 (162)
T ss_dssp SSB--TTEEEEE-TTSB--TT-SEEEEGGGC-EEETT-----EEEESS--STTTTEE-TTSSB-TTSE
T ss_pred cccCCCCeEEEEeCCCccCCCCCEEEEehhe-eeccc-----EEEEeeccCCCCcEEeCCccccCCCE
Confidence 3779999999999999999 7887754433 33332 3333322 2 356678888888874
No 256
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=22.08 E-value=1.4e+02 Score=28.04 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=27.7
Q ss_pred CCccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCC
Q 002176 493 PRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (956)
Q Consensus 493 lR~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi 531 (956)
--+++.++++.+++.|++++.+|++.+ .+ ..+.+-|.
T Consensus 55 ~t~e~i~~~~~a~~~g~~iI~IT~~~~-l~-~~~~~~~~ 91 (119)
T cd05017 55 NTEETLSAVEQAKERGAKIVAITSGGK-LL-EMAREHGV 91 (119)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEeCCch-HH-HHHHHcCC
Confidence 346889999999999999999999874 22 24444443
No 257
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=21.81 E-value=7.8e+02 Score=30.88 Aligned_cols=80 Identities=19% Similarity=0.122 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCc-EEEEeCCCeeecceEEee-cC
Q 002176 100 FVGIVTLLLINSTISFIEENNAG-NAAAALMASLAPKSKVLRDGKWMEEDAAILVPGD-IISVKLGDIIPADARLLE-GD 176 (956)
Q Consensus 100 ~~~ii~~~li~~~i~~~~e~~a~-~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGD-iV~l~~Gd~VPaD~~ll~-g~ 176 (956)
.+.+.++++++.+++.+.|..++ ++.+++.++..... +-.-. -++-|. ...+...+.+|=|.++++ |+
T Consensus 65 ~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~----~~~a~-----vir~g~~~~~V~~~eL~~GDiV~v~~Gd 135 (679)
T PRK01122 65 NLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKK----DTFAR-----KLREPGAAEEVPATELRKGDIVLVEAGE 135 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----CCeEE-----EEECCCEEEEEEHHHcCCCCEEEEcCCC
Confidence 45556677778887776666655 56666555432221 11111 123355 677888889999998885 44
Q ss_pred CceeeccccCCc
Q 002176 177 PLKIDQSALTGE 188 (956)
Q Consensus 177 ~l~VDeS~LTGE 188 (956)
.+-+|=-.+.|+
T Consensus 136 ~IPaDG~vieG~ 147 (679)
T PRK01122 136 IIPADGEVIEGV 147 (679)
T ss_pred EEEEEEEEEEcc
Confidence 455565555564
No 258
>COG3462 Predicted membrane protein [Function unknown]
Probab=21.77 E-value=4.3e+02 Score=24.70 Aligned_cols=12 Identities=17% Similarity=0.133 Sum_probs=5.9
Q ss_pred ccCchhHHHHHH
Q 002176 819 AIEGVGWGWAGV 830 (956)
Q Consensus 819 ~~~~~~~~~~~~ 830 (956)
.+.+...+||++
T Consensus 41 gm~GG~yGm~lI 52 (117)
T COG3462 41 GMMGGLYGMWLI 52 (117)
T ss_pred ccccchhhhHHH
Confidence 344444455554
No 259
>PRK00856 pyrB aspartate carbamoyltransferase catalytic subunit; Provisional
Probab=21.76 E-value=4.3e+02 Score=29.58 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=33.8
Q ss_pred CccHHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHhCCC
Q 002176 494 RHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 494 R~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 532 (956)
.+.++++++-+.+.|..++++=.....++.+.|+.++++
T Consensus 87 gEs~~Dta~vls~y~~D~iv~R~~~~~~~~~~a~~~~vP 125 (305)
T PRK00856 87 GETLADTIRTLSAMGADAIVIRHPQSGAARLLAESSDVP 125 (305)
T ss_pred CcCHHHHHHHHHhcCCCEEEEeCCChHHHHHHHHHCCCC
Confidence 578889999999999999999888888999999987764
No 260
>PF13807 GNVR: G-rich domain on putative tyrosine kinase
Probab=21.75 E-value=1.7e+02 Score=25.66 Aligned_cols=33 Identities=30% Similarity=0.230 Sum_probs=20.6
Q ss_pred CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHH
Q 002176 697 DRVKPSPLPDSWKLAEIFTTGVILGGYLAMMTV 729 (956)
Q Consensus 697 d~~~p~~~p~~~~~~~~~~~~~~~G~~~~~~~~ 729 (956)
|+..+|..|.+++...++..++++|+..+++.+
T Consensus 45 d~A~~P~~P~~P~~~lil~l~~~~Gl~lgi~~~ 77 (82)
T PF13807_consen 45 DPAIVPDKPVSPKRALILALGLFLGLILGIGLA 77 (82)
T ss_pred cccccCCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 444555556666666667777777777665543
No 261
>PF05975 EcsB: Bacterial ABC transporter protein EcsB; InterPro: IPR010288 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters [].
Probab=21.38 E-value=1.3e+03 Score=26.60 Aligned_cols=25 Identities=20% Similarity=0.291 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 002176 643 FQRMKNYTIYAVSITIRIVLGFMLL 667 (956)
Q Consensus 643 ~~~i~~~i~~~~~~ni~~vl~~~~~ 667 (956)
.+.+.||..|.+--++..++.++..
T Consensus 13 ~k~~~kYlr~v~ndh~~l~l~~~~g 37 (386)
T PF05975_consen 13 WKEQLKYLRYVFNDHFVLYLIFLLG 37 (386)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHH
Confidence 4556677777776666655544433
No 262
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=21.32 E-value=4.9e+02 Score=33.01 Aligned_cols=73 Identities=23% Similarity=0.216 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEee-cCCceeecccc
Q 002176 107 LLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKIDQSAL 185 (956)
Q Consensus 107 ~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~-g~~l~VDeS~L 185 (956)
+++..+-++++.+...++.+.+.++......-. .. +.-|....+...+.+|=|.+++. |+.+-+|=-.+
T Consensus 213 ~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a-----~v-----ir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi 282 (741)
T PRK11033 213 LLLFLIGERLEGYAASRARRGVSALMALVPETA-----TR-----LRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL 282 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEE-----EE-----EECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE
Confidence 344555677888888888888887654433211 11 24577778888888888988874 55555666666
Q ss_pred CCcC
Q 002176 186 TGES 189 (956)
Q Consensus 186 TGES 189 (956)
.|++
T Consensus 283 ~g~~ 286 (741)
T PRK11033 283 SPFA 286 (741)
T ss_pred ECcE
Confidence 6654
No 263
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.10 E-value=2.1e+02 Score=31.86 Aligned_cols=137 Identities=16% Similarity=0.166 Sum_probs=74.5
Q ss_pred cCCCCCccHHHHHHHHHhCCCeE---EEEcCCChHH------HHHHHHHhCCCCCCCCC-------------------cc
Q 002176 489 LFDPPRHDSAETIRRALNLGVNV---KMITGDQLAI------AKETGRRLGMGTNMYPS-------------------SA 540 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~aGI~v---~miTGD~~~t------A~~ia~~lGi~~~~~~~-------------------~~ 540 (956)
+.+.+|++.++-++.+++.|++. .++-||+++. ....|+++||....+.- ..
T Consensus 10 vA~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~ 89 (297)
T PRK14167 10 VAAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADED 89 (297)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 34567888999999998888853 5567988753 44556778885321100 00
Q ss_pred ccCC----ccccc------------------cCcccHHHHhhhcceEEeeChhhHHHHHHHHhh--CCCEEEEEcCCcc-
Q 002176 541 LLGQ----NKDES------------------IVALPVDELIEKADGFAGVFPEHKYEIVKRLQA--RKHICGMTGDGVN- 595 (956)
Q Consensus 541 l~g~----~~~~~------------------~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~--~g~~V~m~GDGvN- 595 (956)
+.|- .+... +...++..+...-..|.=|||.-=.++++.++- .|..|.++|-+..
T Consensus 90 V~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iV 169 (297)
T PRK14167 90 VHGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIV 169 (297)
T ss_pred CCEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccc
Confidence 0000 00000 011112222222234556788777777776653 5899999999854
Q ss_pred ---Chhhhcc------CCeeEEeccccH--HHhhccceeec
Q 002176 596 ---DAPALKK------ADIGIAVADATD--AARSASDIVLT 625 (956)
Q Consensus 596 ---DapALk~------AdVGIamg~gtd--~Ak~aADivL~ 625 (956)
=+-+|.+ |.|-++-....+ ..-..|||++.
T Consensus 170 GkPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 170 GKPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVA 210 (297)
T ss_pred HHHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 1234432 445554442222 22347888886
No 264
>PRK10671 copA copper exporting ATPase; Provisional
Probab=20.71 E-value=6.6e+02 Score=32.34 Aligned_cols=76 Identities=21% Similarity=0.248 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEECCeEEEEeccCcCCCcEEEEeCCCeeecceEEee-cCCceeec
Q 002176 104 VTLLLINSTISFIEENNAGNAAAALMASLAPKSKVLRDGKWMEEDAAILVPGDIISVKLGDIIPADARLLE-GDPLKIDQ 182 (956)
Q Consensus 104 i~~~li~~~i~~~~e~~a~~~~~~l~~~~~~~~~V~RdG~~~~I~~~~LvpGDiV~l~~Gd~VPaD~~ll~-g~~l~VDe 182 (956)
..++++..+.+++|++...++.+++.++........| -+.-|....+...+..|=|.+++. |+.+-+|=
T Consensus 290 ~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~----------~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg 359 (834)
T PRK10671 290 AMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTAR----------VVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDG 359 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEE----------EEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeE
Confidence 3445566666788888888888888876554332221 123466677888888888888874 55555666
Q ss_pred cccCCcC
Q 002176 183 SALTGES 189 (956)
Q Consensus 183 S~LTGES 189 (956)
-.+.|++
T Consensus 360 ~v~~g~~ 366 (834)
T PRK10671 360 EITQGEA 366 (834)
T ss_pred EEEEceE
Confidence 6666653
No 265
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.44 E-value=2.1e+02 Score=31.71 Aligned_cols=45 Identities=20% Similarity=0.224 Sum_probs=30.7
Q ss_pred cCCCCCccHHHHHHHHHhC-CCe---EEEEcCCChHH------HHHHHHHhCCCC
Q 002176 489 LFDPPRHDSAETIRRALNL-GVN---VKMITGDQLAI------AKETGRRLGMGT 533 (956)
Q Consensus 489 ~~D~lR~~~~~aI~~l~~a-GI~---v~miTGD~~~t------A~~ia~~lGi~~ 533 (956)
+.++++++.++-++.+++. |++ ..++-||+++. ....|+++||..
T Consensus 9 ~A~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~ 63 (285)
T PRK14191 9 LSYKIEKDLKNKIQILTAQTGKRPKLAVILVGKDPASQTYVNMKIKACERVGMDS 63 (285)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEE
Confidence 3456778888899998755 775 34557888653 345567788753
No 266
>COG3071 HemY Uncharacterized enzyme of heme biosynthesis [Coenzyme metabolism]
Probab=20.34 E-value=2.3e+02 Score=32.58 Aligned_cols=15 Identities=20% Similarity=0.226 Sum_probs=8.4
Q ss_pred hhhhHHHhhhhhhcc
Q 002176 856 KAWDLVIEQRIAFTR 870 (956)
Q Consensus 856 ~~~~~~~~~~~~~~~ 870 (956)
..|+..-+++++.+.
T Consensus 73 ~~w~~~rKrrra~~~ 87 (400)
T COG3071 73 RGWFSRRKRRRARKA 87 (400)
T ss_pred HHHHHHHHHHHHHHH
Confidence 467775555555433
No 267
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.09 E-value=2e+02 Score=25.02 Aligned_cols=47 Identities=13% Similarity=0.273 Sum_probs=36.2
Q ss_pred EeccCCCCCccHHHHHHHHHhCCCeEEE-EcCCChHHHHHHHHHhCCC
Q 002176 486 LMPLFDPPRHDSAETIRRALNLGVNVKM-ITGDQLAIAKETGRRLGMG 532 (956)
Q Consensus 486 li~~~D~lR~~~~~aI~~l~~aGI~v~m-iTGD~~~tA~~ia~~lGi~ 532 (956)
++++.+..++.+.+..+.|++.|++|.+ ..+.+..--..-|.+.|+.
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~ 53 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIP 53 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCC
Confidence 3445567788899999999999999988 4666666667777888874
Done!