Query 002177
Match_columns 956
No_of_seqs 242 out of 356
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 15:39:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002177.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002177hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ypd_A Probable JMJC domain-co 100.0 9E-129 3E-133 1061.2 17.6 353 484-919 20-375 (392)
2 4gjz_A Lysine-specific demethy 99.2 1.2E-11 4.1E-16 124.5 6.5 36 823-858 197-232 (235)
3 3k2o_A Bifunctional arginine d 99.2 1E-10 3.5E-15 128.4 13.8 53 823-875 252-304 (336)
4 3k3o_A PHF8, PHD finger protei 99.1 1.1E-09 3.6E-14 121.8 16.2 88 824-923 214-302 (371)
5 3kv4_A PHD finger protein 8; e 99.1 7.3E-10 2.5E-14 125.7 15.1 88 824-923 298-386 (447)
6 2yu1_A JMJC domain-containing 99.0 3.8E-09 1.3E-13 120.0 18.0 85 822-917 261-345 (451)
7 3kv9_A JMJC domain-containing 99.0 1E-08 3.5E-13 114.8 17.8 88 824-922 242-329 (397)
8 3kv5_D JMJC domain-containing 99.0 2.4E-09 8.1E-14 122.8 13.0 88 824-922 333-420 (488)
9 3pua_A GRC5, PHD finger protei 98.9 1.2E-08 4.1E-13 114.1 16.1 86 823-920 240-326 (392)
10 3al5_A HTYW5, JMJC domain-cont 98.8 7.3E-09 2.5E-13 113.2 9.7 42 824-865 237-278 (338)
11 3d8c_A Hypoxia-inducible facto 98.7 3.2E-09 1.1E-13 116.6 3.9 40 823-862 257-297 (349)
12 3pur_A Lysine-specific demethy 98.2 9.8E-06 3.4E-10 93.4 13.0 51 824-874 363-413 (528)
13 3avr_A Lysine-specific demethy 97.7 0.00017 5.7E-09 83.6 11.9 86 764-868 294-379 (531)
14 4ask_A Lysine-specific demethy 97.6 0.0001 3.4E-09 84.7 8.9 144 764-931 269-424 (510)
15 2xxz_A Lysine-specific demethy 97.5 0.00017 6E-09 79.3 8.5 84 764-866 235-318 (332)
16 3dxt_A JMJC domain-containing 95.8 0.0079 2.7E-07 66.8 5.8 92 765-868 211-303 (354)
17 3opt_A DNA damage-responsive t 95.4 0.022 7.6E-07 63.6 7.3 91 765-867 254-345 (373)
18 2ox0_A JMJC domain-containing 94.5 0.036 1.2E-06 62.1 6.1 93 764-868 228-321 (381)
19 1vrb_A Putative asparaginyl hy 94.2 0.057 1.9E-06 59.3 6.7 57 824-883 215-281 (342)
20 2d8t_A Dactylidin, ring finger 90.8 0.28 9.6E-06 41.2 4.9 46 191-245 13-58 (71)
21 1yhf_A Hypothetical protein SP 90.8 0.12 4.1E-06 46.2 2.8 58 800-864 57-114 (115)
22 2opk_A Hypothetical protein; p 90.7 0.078 2.7E-06 48.6 1.6 24 829-852 75-98 (112)
23 2pfw_A Cupin 2, conserved barr 90.4 0.098 3.3E-06 46.9 1.9 57 800-864 51-107 (116)
24 3ht1_A REMF protein; cupin fol 90.1 0.17 5.8E-06 46.8 3.2 41 824-864 76-116 (145)
25 3fjs_A Uncharacterized protein 89.8 0.13 4.6E-06 47.0 2.3 54 805-864 57-110 (114)
26 2q30_A Uncharacterized protein 89.8 0.11 3.6E-06 45.8 1.5 39 823-863 69-108 (110)
27 3h8u_A Uncharacterized conserv 89.5 0.17 5.9E-06 46.0 2.8 38 826-863 78-115 (125)
28 3lag_A Uncharacterized protein 89.5 0.12 4.2E-06 46.6 1.7 24 829-852 61-84 (98)
29 4ayc_A E3 ubiquitin-protein li 89.3 0.59 2E-05 44.4 6.4 43 194-245 54-96 (138)
30 1v70_A Probable antibiotics sy 89.3 0.18 6E-06 43.4 2.5 38 826-863 66-103 (105)
31 4e2g_A Cupin 2 conserved barre 89.2 0.22 7.4E-06 45.3 3.2 59 800-865 58-116 (126)
32 2csy_A Zinc finger protein 183 89.0 0.24 8.2E-06 42.6 3.2 48 191-247 13-60 (81)
33 2ozj_A Cupin 2, conserved barr 87.8 0.19 6.4E-06 45.2 1.8 49 804-857 58-106 (114)
34 2b8m_A Hypothetical protein MJ 87.8 0.18 6.3E-06 45.4 1.7 39 826-864 64-105 (117)
35 2xlg_A SLL1785 protein, CUCA; 87.8 0.35 1.2E-05 50.7 4.1 50 828-877 103-163 (239)
36 1juh_A Quercetin 2,3-dioxygena 87.8 0.23 7.8E-06 54.4 2.8 40 828-868 292-332 (350)
37 2djb_A Polycomb group ring fin 87.6 0.31 1.1E-05 41.0 2.9 46 192-245 14-59 (72)
38 2gu9_A Tetracenomycin polyketi 87.6 0.22 7.7E-06 43.7 2.1 41 824-864 59-99 (113)
39 2ecw_A Tripartite motif-contai 87.6 0.45 1.5E-05 40.4 4.0 52 192-246 18-69 (85)
40 2fqp_A Hypothetical protein BP 87.5 0.25 8.7E-06 43.5 2.4 25 828-852 60-84 (97)
41 3ibm_A Cupin 2, conserved barr 87.5 0.22 7.5E-06 49.0 2.2 59 800-864 73-132 (167)
42 3lrq_A E3 ubiquitin-protein li 87.1 0.29 1E-05 44.1 2.6 48 192-246 21-68 (100)
43 3d82_A Cupin 2, conserved barr 87.0 0.29 9.8E-06 42.4 2.4 28 828-855 69-96 (102)
44 2yur_A Retinoblastoma-binding 87.0 0.34 1.2E-05 41.2 2.8 47 192-244 14-60 (74)
45 2egp_A Tripartite motif-contai 86.9 0.35 1.2E-05 40.9 2.9 53 191-246 10-63 (79)
46 1o5u_A Novel thermotoga mariti 86.7 0.21 7.2E-06 45.6 1.5 31 826-856 67-97 (101)
47 3kgz_A Cupin 2 conserved barre 86.6 0.39 1.3E-05 46.9 3.4 42 824-865 79-120 (156)
48 2ecy_A TNF receptor-associated 86.0 0.46 1.6E-05 39.3 3.0 46 192-245 14-59 (66)
49 3h7j_A Bacilysin biosynthesis 85.8 0.29 1E-05 50.5 2.2 59 800-864 163-221 (243)
50 2ecm_A Ring finger and CHY zin 85.6 0.41 1.4E-05 37.7 2.5 46 192-244 4-51 (55)
51 2ecv_A Tripartite motif-contai 85.1 0.34 1.1E-05 41.2 1.8 52 192-246 18-69 (85)
52 2dip_A Zinc finger SWIM domain 85.0 0.28 9.6E-06 45.4 1.4 36 317-352 29-66 (98)
53 2fc7_A ZZZ3 protein; structure 85.0 0.29 1E-05 43.8 1.4 37 316-352 18-59 (82)
54 1y9q_A Transcriptional regulat 84.5 0.35 1.2E-05 47.6 1.9 43 822-865 139-181 (192)
55 2ozi_A Hypothetical protein RP 84.1 0.31 1.1E-05 44.2 1.3 23 830-852 62-84 (98)
56 2kiz_A E3 ubiquitin-protein li 83.9 0.8 2.7E-05 37.9 3.6 47 191-244 12-59 (69)
57 1iym_A EL5; ring-H2 finger, ub 83.9 0.93 3.2E-05 35.8 3.8 45 193-244 5-51 (55)
58 1lr5_A Auxin binding protein 1 83.8 0.42 1.4E-05 45.9 2.1 25 827-851 88-112 (163)
59 1tot_A CREB-binding protein; z 83.7 0.29 1E-05 40.3 0.8 33 319-352 6-39 (52)
60 2e5r_A Dystrobrevin alpha; ZZ 83.7 0.36 1.2E-05 41.2 1.4 33 320-352 12-46 (63)
61 3cew_A Uncharacterized cupin p 83.6 0.56 1.9E-05 42.8 2.8 29 823-851 62-90 (125)
62 2i45_A Hypothetical protein; n 83.2 0.54 1.8E-05 41.8 2.4 38 827-867 67-104 (107)
63 3l2h_A Putative sugar phosphat 82.9 0.51 1.8E-05 45.2 2.3 40 824-863 83-123 (162)
64 2ecj_A Tripartite motif-contai 82.8 1.6 5.4E-05 34.6 4.8 45 192-242 14-58 (58)
65 2oa2_A BH2720 protein; 1017534 82.8 0.69 2.4E-05 43.9 3.1 25 828-852 89-113 (148)
66 2ect_A Ring finger protein 126 82.6 1.2 4.1E-05 37.7 4.3 48 191-245 13-61 (78)
67 3jzv_A Uncharacterized protein 82.4 0.57 1.9E-05 46.3 2.4 42 823-864 87-128 (166)
68 1x4j_A Ring finger protein 38; 82.1 0.81 2.8E-05 38.7 3.0 47 191-244 21-68 (75)
69 4h7l_A Uncharacterized protein 81.3 0.3 1E-05 48.7 -0.0 45 800-849 62-108 (157)
70 1vj2_A Novel manganese-contain 80.9 0.62 2.1E-05 42.9 2.0 29 824-852 83-111 (126)
71 4i4a_A Similar to unknown prot 80.7 1.5 5E-05 39.9 4.4 56 822-881 67-124 (128)
72 4axo_A EUTQ, ethanolamine util 80.6 0.74 2.5E-05 45.4 2.5 58 802-866 82-139 (151)
73 1x82_A Glucose-6-phosphate iso 80.5 0.89 3E-05 45.5 3.1 40 825-864 117-156 (190)
74 2o8q_A Hypothetical protein; c 80.3 0.75 2.6E-05 42.4 2.4 60 800-865 60-120 (134)
75 2y43_A E3 ubiquitin-protein li 79.4 1.9 6.4E-05 38.3 4.5 46 192-245 21-66 (99)
76 2ysl_A Tripartite motif-contai 79.2 1.1 3.8E-05 37.3 2.9 48 192-245 19-66 (73)
77 2l0b_A E3 ubiquitin-protein li 79.2 1.6 5.6E-05 38.5 4.1 48 191-245 38-86 (91)
78 4ic3_A E3 ubiquitin-protein li 79.2 1.5 5.3E-05 37.4 3.8 41 192-244 23-63 (74)
79 2ep4_A Ring finger protein 24; 79.1 1.9 6.4E-05 36.1 4.2 46 192-244 14-60 (74)
80 3lwc_A Uncharacterized protein 78.8 0.92 3.1E-05 42.3 2.4 37 826-864 76-113 (119)
81 1chc_A Equine herpes virus-1 r 78.1 1.5 5.1E-05 36.1 3.3 46 192-245 4-49 (68)
82 2ea6_A Ring finger protein 4; 77.9 1.2 3.9E-05 36.5 2.5 48 191-245 13-65 (69)
83 2bnm_A Epoxidase; oxidoreducta 77.7 1 3.4E-05 44.3 2.4 45 800-850 137-185 (198)
84 1t1h_A Gspef-atpub14, armadill 77.5 2.2 7.6E-05 36.0 4.3 46 192-245 7-52 (78)
85 3i7d_A Sugar phosphate isomera 77.4 1 3.5E-05 43.8 2.4 58 801-863 62-121 (163)
86 2ecn_A Ring finger protein 141 77.1 0.82 2.8E-05 38.0 1.4 44 191-244 13-56 (70)
87 2ckl_A Polycomb group ring fin 77.1 1.8 6.2E-05 39.1 3.8 46 192-245 14-59 (108)
88 3rns_A Cupin 2 conserved barre 77.1 0.89 3.1E-05 46.5 2.0 48 800-853 170-218 (227)
89 3bcw_A Uncharacterized protein 76.8 0.87 3E-05 43.0 1.6 30 829-858 89-118 (123)
90 1y3t_A Hypothetical protein YX 76.7 1.1 3.7E-05 47.5 2.5 67 800-872 235-301 (337)
91 1fi2_A Oxalate oxidase, germin 76.6 1.7 5.9E-05 43.6 3.9 39 827-865 119-157 (201)
92 3l11_A E3 ubiquitin-protein li 75.9 1.7 6E-05 39.6 3.4 46 192-245 14-59 (115)
93 3ng2_A RNF4, snurf, ring finge 75.9 1.3 4.5E-05 36.6 2.3 48 191-245 8-60 (71)
94 2lri_C Autoimmune regulator; Z 75.8 2.9 0.0001 35.8 4.5 49 191-244 10-58 (66)
95 2ckl_B Ubiquitin ligase protei 75.5 1.5 5.3E-05 42.5 3.1 48 192-246 53-100 (165)
96 3fl2_A E3 ubiquitin-protein li 75.4 1.1 3.8E-05 41.5 2.0 47 192-246 51-97 (124)
97 3ztg_A E3 ubiquitin-protein li 75.1 1.8 6E-05 37.9 3.0 49 191-245 11-59 (92)
98 1z6u_A NP95-like ring finger p 74.8 1.4 4.7E-05 42.9 2.5 47 192-246 77-123 (150)
99 2ct2_A Tripartite motif protei 74.7 1.7 5.8E-05 37.3 2.8 51 191-245 13-65 (88)
100 1qwr_A Mannose-6-phosphate iso 74.4 1 3.6E-05 49.0 1.7 18 831-848 162-179 (319)
101 2f4p_A Hypothetical protein TM 74.1 1.8 6E-05 41.3 3.0 35 829-863 89-123 (147)
102 2ecl_A Ring-box protein 2; RNF 73.5 4.4 0.00015 35.1 5.1 31 208-245 43-73 (81)
103 1zx5_A Mannosephosphate isomer 73.4 1.1 3.9E-05 48.3 1.7 19 830-848 161-179 (300)
104 1o4t_A Putative oxalate decarb 72.5 1.3 4.5E-05 41.3 1.7 31 822-852 91-121 (133)
105 2xeu_A Ring finger protein 4; 72.2 1.1 3.7E-05 36.1 0.9 32 207-245 22-53 (64)
106 1jm7_A BRCA1, breast cancer ty 71.9 1.7 5.7E-05 39.1 2.2 48 192-245 20-67 (112)
107 3rns_A Cupin 2 conserved barre 70.6 1.5 5E-05 44.9 1.7 54 800-859 54-107 (227)
108 1rc6_A Hypothetical protein YL 70.5 1.3 4.6E-05 46.0 1.4 47 801-852 197-243 (261)
109 3a1b_A DNA (cytosine-5)-methyl 70.1 3.2 0.00011 41.6 3.8 50 192-244 78-133 (159)
110 2vqa_A SLL1358 protein, MNCA; 69.7 1.7 5.9E-05 46.8 2.1 53 828-881 279-331 (361)
111 1jm7_B BARD1, BRCA1-associated 69.6 2.6 8.8E-05 38.8 2.9 44 192-245 21-64 (117)
112 3h7j_A Bacilysin biosynthesis 69.3 2 6.9E-05 44.2 2.4 47 800-852 51-98 (243)
113 2lv9_A Histone-lysine N-methyl 69.2 3.4 0.00012 37.8 3.6 47 192-243 27-74 (98)
114 1y3t_A Hypothetical protein YX 69.2 2 6.7E-05 45.5 2.3 49 822-871 80-128 (337)
115 2pyt_A Ethanolamine utilizatio 68.7 2.3 8E-05 40.4 2.5 35 824-858 90-124 (133)
116 1g25_A CDK-activating kinase a 68.4 3.4 0.00012 33.8 3.1 46 194-245 4-52 (65)
117 3ql9_A Transcriptional regulat 68.1 2.4 8.3E-05 41.1 2.5 50 192-244 56-110 (129)
118 2wfp_A Mannose-6-phosphate iso 67.9 1.8 6.1E-05 48.7 1.7 17 831-847 244-260 (394)
119 2l5u_A Chromodomain-helicase-D 67.6 4.7 0.00016 33.8 3.8 50 190-244 8-57 (61)
120 1juh_A Quercetin 2,3-dioxygena 67.4 1.9 6.6E-05 47.1 1.9 70 800-875 67-141 (350)
121 1sef_A Conserved hypothetical 67.3 2 6.7E-05 45.2 1.8 43 805-852 204-246 (274)
122 2pv0_B DNA (cytosine-5)-methyl 67.0 3.8 0.00013 46.2 4.1 50 192-244 92-147 (386)
123 2ysj_A Tripartite motif-contai 66.7 2.1 7.2E-05 34.8 1.5 45 192-242 19-63 (63)
124 1pmi_A PMI, phosphomannose iso 65.5 2.1 7.2E-05 48.8 1.7 16 831-846 270-285 (440)
125 4e2q_A Ureidoglycine aminohydr 65.0 2.1 7.3E-05 45.8 1.6 30 822-851 220-249 (266)
126 2vpv_A Protein MIF2, MIF2P; nu 64.8 3.3 0.00011 41.5 2.8 30 823-852 124-153 (166)
127 4diq_A Lysine-specific demethy 64.7 4 0.00014 47.3 3.8 42 822-863 223-266 (489)
128 2lbm_A Transcriptional regulat 64.3 3.5 0.00012 40.5 2.8 50 191-243 61-115 (142)
129 4ap4_A E3 ubiquitin ligase RNF 64.2 4.4 0.00015 36.9 3.4 46 192-244 71-121 (133)
130 2ea5_A Cell growth regulator w 64.2 7 0.00024 33.1 4.3 42 191-244 13-54 (68)
131 1j58_A YVRK protein; cupin, de 63.8 2.3 7.8E-05 46.4 1.6 55 826-881 300-354 (385)
132 2d40_A Z3393, putative gentisa 63.8 3.3 0.00011 45.5 2.8 40 824-863 136-175 (354)
133 2xdv_A MYC-induced nuclear ant 63.7 4.1 0.00014 46.4 3.7 31 821-851 193-223 (442)
134 1rmd_A RAG1; V(D)J recombinati 63.6 3 0.0001 38.1 2.1 46 192-245 22-67 (116)
135 2yho_A E3 ubiquitin-protein li 62.9 5.9 0.0002 34.4 3.7 42 192-245 17-58 (79)
136 1v87_A Deltex protein 2; ring- 62.8 2.5 8.6E-05 38.3 1.4 37 207-245 55-91 (114)
137 1fp0_A KAP-1 corepressor; PHD 62.2 6 0.00021 36.0 3.7 49 191-244 23-71 (88)
138 3o36_A Transcription intermedi 61.4 3.4 0.00012 41.2 2.2 48 192-244 3-50 (184)
139 1sq4_A GLXB, glyoxylate-induce 61.0 2.8 9.6E-05 44.4 1.6 43 805-852 91-133 (278)
140 3hct_A TNF receptor-associated 60.2 2.8 9.7E-05 38.6 1.3 45 192-244 17-61 (118)
141 2ecg_A Baculoviral IAP repeat- 59.5 6.4 0.00022 33.4 3.3 42 192-245 24-65 (75)
142 1wil_A KIAA1045 protein; ring 59.3 8.1 0.00028 35.2 3.9 53 191-244 13-75 (89)
143 2e6s_A E3 ubiquitin-protein li 59.2 6.5 0.00022 34.7 3.3 48 195-244 28-76 (77)
144 1e4u_A Transcriptional repress 59.1 4.8 0.00016 35.1 2.5 48 192-246 10-60 (78)
145 3nw4_A Gentisate 1,2-dioxygena 58.8 4.3 0.00015 45.3 2.7 29 824-852 139-167 (368)
146 3bu7_A Gentisate 1,2-dioxygena 58.7 4.2 0.00014 45.8 2.6 29 823-851 328-356 (394)
147 2yql_A PHD finger protein 21A; 58.6 2.1 7E-05 35.2 0.0 49 191-244 7-55 (56)
148 1bor_A Transcription factor PM 58.3 4.5 0.00015 32.6 2.0 42 192-245 5-46 (56)
149 1dgw_A Canavalin; duplicated s 58.0 4.6 0.00016 39.9 2.4 27 826-852 82-108 (178)
150 2ct0_A Non-SMC element 1 homol 56.9 15 0.00053 32.1 5.3 48 192-245 14-61 (74)
151 4ap4_A E3 ubiquitin ligase RNF 56.3 5.6 0.00019 36.2 2.5 47 192-245 6-57 (133)
152 3u5n_A E3 ubiquitin-protein li 56.2 8.9 0.0003 39.0 4.2 50 191-245 5-54 (207)
153 1zrr_A E-2/E-2' protein; nicke 56.0 7.8 0.00027 39.0 3.8 25 828-852 123-147 (179)
154 1wg2_A Zinc finger (AN1-like) 55.8 8.9 0.00031 33.2 3.5 36 190-230 12-47 (64)
155 3knv_A TNF receptor-associated 55.5 2.4 8.3E-05 40.8 -0.0 45 192-244 30-74 (141)
156 1wgm_A Ubiquitin conjugation f 55.2 8.6 0.00029 34.8 3.5 45 192-244 21-65 (98)
157 2vje_A E3 ubiquitin-protein li 54.8 4.8 0.00017 33.5 1.7 47 192-244 7-53 (64)
158 2vqa_A SLL1358 protein, MNCA; 54.3 3.4 0.00012 44.5 0.9 55 827-881 96-152 (361)
159 1sfn_A Conserved hypothetical 54.3 4.3 0.00015 42.0 1.6 31 823-853 82-112 (246)
160 2d5f_A Glycinin A3B4 subunit; 54.2 5.5 0.00019 46.0 2.6 34 832-865 118-151 (493)
161 1f62_A Transcription factor WS 52.6 12 0.00041 29.8 3.6 47 195-244 2-49 (51)
162 3v43_A Histone acetyltransfera 52.3 7.2 0.00024 36.2 2.6 50 192-244 60-111 (112)
163 3es1_A Cupin 2, conserved barr 51.7 6.4 0.00022 39.5 2.3 35 828-863 119-153 (172)
164 2e9q_A 11S globulin subunit be 51.7 5.7 0.0002 45.5 2.2 34 832-865 132-165 (459)
165 4b29_A Dimethylsulfoniopropion 51.2 4.9 0.00017 42.0 1.4 46 800-851 149-195 (217)
166 2y1n_A E3 ubiquitin-protein li 50.9 5.5 0.00019 44.9 1.8 46 193-246 332-377 (389)
167 3t6p_A Baculoviral IAP repeat- 50.4 7.7 0.00026 42.9 2.9 42 192-245 294-335 (345)
168 1sfn_A Conserved hypothetical 50.1 5.9 0.0002 41.0 1.8 32 821-852 198-229 (246)
169 3dpl_R Ring-box protein 1; ubi 50.1 5.9 0.0002 36.6 1.6 27 211-244 71-97 (106)
170 1vr3_A Acireductone dioxygenas 49.3 11 0.00037 38.6 3.6 37 828-864 128-164 (191)
171 1sef_A Conserved hypothetical 48.6 6.2 0.00021 41.3 1.7 31 822-852 97-127 (274)
172 1rc6_A Hypothetical protein YL 47.8 8.1 0.00028 40.0 2.5 30 823-852 95-124 (261)
173 4e2q_A Ureidoglycine aminohydr 47.7 5.9 0.0002 42.4 1.4 24 828-851 110-133 (266)
174 1wfk_A Zinc finger, FYVE domai 47.6 8.5 0.00029 34.6 2.2 37 191-228 7-45 (88)
175 3c3v_A Arachin ARAH3 isoform; 47.4 7.6 0.00026 45.2 2.3 34 832-865 131-164 (510)
176 1sq4_A GLXB, glyoxylate-induce 47.3 5.8 0.0002 42.0 1.2 32 821-852 224-255 (278)
177 2c2l_A CHIP, carboxy terminus 46.6 9.4 0.00032 39.1 2.7 48 191-246 206-253 (281)
178 2vje_B MDM4 protein; proto-onc 46.5 7.6 0.00026 32.2 1.6 47 192-244 6-52 (63)
179 2ysm_A Myeloid/lymphoid or mix 46.1 16 0.00055 33.5 3.9 58 191-254 5-63 (111)
180 1mm2_A MI2-beta; PHD, zinc fin 45.8 8.2 0.00028 32.3 1.7 49 191-244 7-55 (61)
181 3htk_C E3 SUMO-protein ligase 45.7 16 0.00053 39.4 4.2 49 191-245 179-229 (267)
182 1wfp_A Zinc finger (AN1-like) 45.5 23 0.00078 31.5 4.5 36 190-230 22-57 (74)
183 1fxz_A Glycinin G1; proglycini 45.1 8.9 0.00031 44.1 2.4 30 829-858 115-144 (476)
184 2d40_A Z3393, putative gentisa 45.0 9.8 0.00034 41.8 2.7 27 824-850 303-329 (354)
185 1wfh_A Zinc finger (AN1-like) 44.0 17 0.00057 31.5 3.3 36 190-230 12-47 (64)
186 1wfl_A Zinc finger protein 216 43.7 18 0.00062 32.1 3.6 35 191-230 23-57 (74)
187 1wev_A Riken cDNA 1110020M19; 43.5 3 0.0001 37.4 -1.4 53 191-244 14-71 (88)
188 3bu7_A Gentisate 1,2-dioxygena 43.1 11 0.00036 42.6 2.6 29 823-851 158-187 (394)
189 2arc_A ARAC, arabinose operon 42.2 14 0.00049 34.1 3.0 30 822-851 51-80 (164)
190 2ro1_A Transcription intermedi 41.3 10 0.00034 38.4 1.9 48 193-245 2-49 (189)
191 3cjx_A Protein of unknown func 41.1 12 0.00042 37.1 2.4 34 832-865 85-127 (165)
192 2ct7_A Ring finger protein 31; 41.0 10 0.00035 33.6 1.6 39 311-349 16-59 (86)
193 1weu_A Inhibitor of growth fam 41.0 31 0.001 31.5 4.8 48 191-244 34-84 (91)
194 2kre_A Ubiquitin conjugation f 40.9 53 0.0018 29.7 6.4 46 191-245 27-72 (100)
195 3hcs_A TNF receptor-associated 40.1 9.1 0.00031 37.2 1.3 45 192-244 17-61 (170)
196 2y0o_A Probable D-lyxose ketol 37.9 12 0.00042 37.8 1.8 41 826-868 117-158 (175)
197 1uij_A Beta subunit of beta co 37.6 12 0.00039 42.3 1.8 46 801-851 66-115 (416)
198 1wff_A Riken cDNA 2810002D23 p 36.9 21 0.00072 32.4 3.0 36 190-230 22-58 (85)
199 3asl_A E3 ubiquitin-protein li 36.9 15 0.00052 31.6 2.0 48 195-244 20-68 (70)
200 2puy_A PHD finger protein 21A; 36.7 9.5 0.00033 31.6 0.7 47 192-243 4-50 (60)
201 3shb_A E3 ubiquitin-protein li 36.5 14 0.00046 32.7 1.7 48 195-244 28-76 (77)
202 1fxz_A Glycinin G1; proglycini 36.3 16 0.00053 42.1 2.6 81 799-881 354-438 (476)
203 3v43_A Histone acetyltransfera 36.1 17 0.00057 33.7 2.3 46 204-254 23-70 (112)
204 2yrc_A Protein transport prote 35.9 9.3 0.00032 32.3 0.5 16 19-34 8-37 (59)
205 1wep_A PHF8; structural genomi 35.8 62 0.0021 28.0 5.8 47 191-244 10-62 (79)
206 2ri7_A Nucleosome-remodeling f 35.2 10 0.00035 37.2 0.7 47 191-244 6-58 (174)
207 1joc_A EEA1, early endosomal a 34.8 7 0.00024 37.3 -0.5 36 192-228 68-105 (125)
208 1vq8_T 50S ribosomal protein L 34.6 11 0.00037 36.2 0.8 41 801-843 15-55 (120)
209 1wen_A Inhibitor of growth fam 34.0 20 0.00068 31.0 2.3 48 191-244 14-64 (71)
210 3t7l_A Zinc finger FYVE domain 32.0 17 0.00059 32.6 1.7 35 192-227 19-55 (90)
211 4a0k_B E3 ubiquitin-protein li 31.9 9.7 0.00033 36.0 0.0 26 212-244 83-108 (117)
212 2d8v_A Zinc finger FYVE domain 31.2 26 0.00088 30.6 2.5 37 188-227 3-39 (67)
213 2ea7_A 7S globulin-1; beta bar 31.2 22 0.00076 40.3 2.7 33 826-858 102-135 (434)
214 3c3v_A Arachin ARAH3 isoform; 31.1 21 0.0007 41.6 2.5 118 760-881 351-472 (510)
215 3j21_U 50S ribosomal protein L 31.1 14 0.00047 35.5 0.9 39 802-842 19-57 (121)
216 2cav_A Protein (canavalin); vi 30.9 24 0.00083 40.2 3.0 32 827-858 128-160 (445)
217 3ask_A E3 ubiquitin-protein li 30.8 14 0.00047 38.9 0.9 50 193-244 174-224 (226)
218 2kr4_A Ubiquitin conjugation f 30.8 17 0.00059 31.8 1.4 45 191-244 12-56 (85)
219 2e6r_A Jumonji/ARID domain-con 30.7 11 0.00038 34.0 0.2 51 191-244 14-65 (92)
220 2od1_A Protein CBFA2T1; zinc f 30.5 23 0.00079 29.3 2.1 32 191-225 11-43 (60)
221 2k16_A Transcription initiatio 29.8 39 0.0013 28.9 3.4 50 192-244 17-67 (75)
222 1z2q_A LM5-1; membrane protein 29.3 24 0.00083 31.1 2.1 35 192-227 20-56 (84)
223 1j58_A YVRK protein; cupin, de 28.3 27 0.00091 38.0 2.7 53 828-881 123-177 (385)
224 2d5f_A Glycinin A3B4 subunit; 27.9 15 0.00052 42.4 0.7 118 760-881 346-464 (493)
225 2o1q_A Putative acetyl/propion 27.6 22 0.00074 34.0 1.6 26 832-857 89-115 (145)
226 2yw8_A RUN and FYVE domain-con 26.9 26 0.00089 30.8 1.9 36 192-228 18-55 (82)
227 3avr_A Lysine-specific demethy 26.5 42 0.0014 39.3 4.0 36 316-351 455-495 (531)
228 1x4u_A Zinc finger, FYVE domai 26.1 26 0.00089 30.9 1.7 37 191-228 12-50 (84)
229 1y02_A CARP2, FYVE-ring finger 25.8 20 0.0007 34.2 1.0 36 192-228 18-55 (120)
230 1dvp_A HRS, hepatocyte growth 25.6 20 0.00067 36.7 0.9 35 193-228 161-197 (220)
231 2o35_A Hypothetical protein DU 25.5 19 0.00066 33.6 0.8 13 217-229 42-54 (105)
232 1vfy_A Phosphatidylinositol-3- 25.2 24 0.00083 30.3 1.3 33 194-227 12-46 (73)
233 3fyb_A Protein of unknown func 25.2 20 0.00067 33.5 0.8 13 217-229 41-53 (104)
234 2pzo_E CAP-Gly domain-containi 25.0 17 0.00059 29.0 0.3 12 316-327 17-28 (42)
235 3kgl_A Cruciferin; 11S SEED gl 24.9 29 0.00099 40.0 2.3 34 832-865 150-183 (466)
236 3zyq_A Hepatocyte growth facto 24.9 21 0.0007 37.0 0.9 34 193-227 164-199 (226)
237 1x4v_A Hypothetical protein LO 24.8 58 0.002 27.9 3.6 35 191-230 10-46 (63)
238 1v5n_A PDI-like hypothetical p 24.7 27 0.00094 31.3 1.6 31 319-349 47-77 (89)
239 3qac_A 11S globulin SEED stora 23.8 36 0.0012 39.2 2.7 35 832-866 135-169 (465)
240 1wem_A Death associated transc 23.3 45 0.0016 28.6 2.7 46 192-244 15-69 (76)
241 2cs3_A Protein C14ORF4, MY039 23.1 89 0.003 28.4 4.5 35 191-225 13-48 (93)
242 3lqh_A Histone-lysine N-methyl 22.9 63 0.0021 32.8 4.0 47 193-245 2-63 (183)
243 2hqh_E Restin; beta/BETA struc 22.7 21 0.00071 26.0 0.3 9 318-326 2-10 (26)
244 3nw4_A Gentisate 1,2-dioxygena 21.8 43 0.0015 37.4 2.8 30 825-854 315-344 (368)
245 1wys_A Riken cDNA 2310008M20 p 21.8 68 0.0023 28.4 3.5 35 190-229 11-47 (75)
246 2vpb_A Hpygo1, pygopus homolog 20.9 37 0.0013 28.9 1.6 47 191-243 6-64 (65)
247 1g47_A Pinch protein; LIM doma 20.8 74 0.0025 26.4 3.5 14 216-229 60-73 (77)
248 2dj8_A Protein CBFA2T1; zinc f 20.8 67 0.0023 26.4 3.1 32 191-225 13-45 (60)
249 2odd_A Protein CBFA2T1; MYND z 20.6 44 0.0015 27.7 2.0 32 191-225 15-47 (64)
250 3nw0_A Non-structural maintena 20.5 80 0.0027 33.0 4.4 48 192-245 179-226 (238)
251 2xb1_A Pygopus homolog 2, B-ce 20.2 25 0.00087 32.4 0.4 45 194-244 4-60 (105)
No 1
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.9e-129 Score=1061.18 Aligned_cols=353 Identities=27% Similarity=0.467 Sum_probs=272.9
Q ss_pred CchhHHHHHHhhhcCCCEEEeccccCCCCCCCChhhhhhhhhhhcccccccccCceEEEeCCCCCeeecchhhhccccCC
Q 002177 484 RSEGIGNFRKHWVKGEPVIVKQVCDSSSMSIWDPKDIWRGIRETADEKTKDENRIVKAIDCLDWSEVDIELGEFIKGYSE 563 (956)
Q Consensus 484 ~~~~l~hFQ~hW~kGePVIVr~Vl~~~s~lsW~P~~mwr~~~e~~~~~~~d~~~~vkaidCld~~ev~i~i~qFf~Gf~~ 563 (956)
+.+|+.|||+||++|||||||||++++++++|+|++||++|++ ..+++|||++|++++|++++||+||++
T Consensus 20 ~~~n~~~Fq~hW~~GePViVs~V~~~~~~~~W~Pe~~~~~~gd----------~~~~lidC~~~~~~~i~v~~Ff~Gf~~ 89 (392)
T 2ypd_A 20 NSSNWKLFKECWKQGQPAVVSGVHKKMNISLWKAESISLDFGD----------HQADLLNCKDSIISNANVKEFWDGFEE 89 (392)
T ss_dssp CTTHHHHHHHHHTTTCCEEECCHHHHSCGGGGSHHHHHHHHTT----------SCCCCEETTTCCBCSCCHHHHHHTSSB
T ss_pred CcccHHHHHHHHhCCCcEEEechhhhCcCCccCHHHHHHHhcC----------ceeeeeeCCCCccccCcHHHHhhhccc
Confidence 4578999999999999999999999999999999999998753 236789999999999999999999999
Q ss_pred Cccc---CCCCceeeeeCCCCCcchhHHhhhccchHHHhcCCcccccCCCCccccccccCCCCCCCCCCCCccccccccc
Q 002177 564 GRVR---EDGWPEMLKLKDWPSPSASEEFLLYHKPEFISKLPLLEYIHSRLGFLNVAAKLPHYSLQNDVGPKIYMSYGTY 640 (956)
Q Consensus 564 gr~~---~~g~p~mLKLKDWPps~~Fee~lP~h~~efi~aLP~~EYT~pr~G~LNLAs~LP~~~lkPDLGPK~YIAYG~~ 640 (956)
++.+ ++|||+|||||||||+++|+|+||+||+|||++||||||||| +|+||||++||+++++||||||||||||++
T Consensus 90 ~~~r~~~~~g~p~~LKLKDWPp~~~F~e~lP~~~~df~~~LPlpEYt~p-~G~LNLAs~LP~~~~kPDLGPK~YiAYG~~ 168 (392)
T 2ypd_A 90 VSKRQKNKSGETVVLKLKDWPSGEDFKTMMPARYEDLLKSLPLPEYCNP-EGKFNLASHLPGFFVRPDLGPRLCSAYGVV 168 (392)
T ss_dssp GGGC------CCCCEEECSSSBTHHHHHHSHHHHHHHHHHCSSHHHHST-TCTTCCTTTSCGGGCC---CCEEEEECCST
T ss_pred cccCCcCCCCCcceeeecCCCChHHHHHHhHHHHHHHHHcCCchHhhCC-CccchHHHhCCCCCCCCCCCcchhhhcCcc
Confidence 8754 699999999999999999999999999999999999999998 599999999999999999999999999999
Q ss_pred ccccCCCCcceeeeeccccceeeeecccccCCCchhhhhhcccccccccccCCCCCccCCCCCCCCCCCCCCCCCchhhc
Q 002177 641 EELDRGNSVKNLHFNMPDMVYLLVHMGEVKLPTTEDEKIQSSSRESEVNESVGDPEKVSGEGSFPDLSLGGHDVNNEHVE 720 (956)
Q Consensus 641 eelGrGdSvTkLH~DmSDAVNIL~ht~ev~~~~~q~~~I~kl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 720 (956)
+++|+|+|||||||||||||||||||++++....... .+.+ +.++++++ +....+
T Consensus 169 ~~~~~~~gvT~LH~DmsDaVNiL~h~~~~~~~~~~~~-~~~l--------------~~~~~~~~----------d~~~~~ 223 (392)
T 2ypd_A 169 AAKDHDIGTTNLHIEVSDVVNILVYVGIAKGNGILSK-AGIL--------------KKFEEEDL----------DDILRK 223 (392)
T ss_dssp TTTCTTCCSEEEEECSSEEEEEEEEEECCBCTTCCCH-HHHH--------------HHHHTSCC----------CHHHHH
T ss_pred hhcccCCCcceeeeehhhhhhhhheecccCccccchh-hhhh--------------hhhhhccc----------cHHHhh
Confidence 9999999999999999999999999998765433211 0100 01111110 101111
Q ss_pred ccccchhhhhhhcCccccccccccccccccCCCCCCCCCCCCceeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccC
Q 002177 721 KSATDEDEIMEDQGVETGTAEEKTVKSERLNGYSDVSEKTHPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVT 800 (956)
Q Consensus 721 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~GAlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~ 800 (956)
+ . .+.++.+||+||||||||++|||+||++|++||+.+. ..+.
T Consensus 224 r----------------------------~-----~~~~~~~GAlW~Ifr~~D~~klr~~L~~~~~e~~~~~----~~~~ 266 (392)
T 2ypd_A 224 R----------------------------L-----KDSSEIPGALWHIYAGKDVDKIREFLQKISKEQGLEV----LPEH 266 (392)
T ss_dssp H----------------------------H-----TCTTCCEEEEEEEECGGGHHHHHHHHHHHHHHHC----------C
T ss_pred h----------------------------c-----cCCCCCCCceeeeeCHhhHHHHHHHHHHHHHhhCCCc----cCCC
Confidence 1 0 1345689999999999999999999999999997653 3478
Q ss_pred CCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCC
Q 002177 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLP 880 (956)
Q Consensus 801 hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp 880 (956)
||||||+||||++||++|+|||||+||||+|++|||||||||||||||||+||||||+||||||||.+|++||+|||+||
T Consensus 267 dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~l~ 346 (392)
T 2ypd_A 267 DPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRLLK 346 (392)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC----
T ss_pred CcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred cchHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHh
Q 002177 881 NDHEAKLQVLEVRQRKLFQEVGKISLYAASSAIKEVQKL 919 (956)
Q Consensus 881 ~~H~aK~d~le~~~~~~~~~Vkkm~lyA~~~avke~~~l 919 (956)
+|.+|+|||| ||+|++||+..||++|++.
T Consensus 347 -~~~~~edkLq---------vk~m~~~av~~av~~l~~~ 375 (392)
T 2ypd_A 347 -EEINYDDKLQ---------VKNILYHAVKEMVRALKIH 375 (392)
T ss_dssp ---------------------------------------
T ss_pred -hhhhhHHHHH---------HHHHHHHHHHHHHHHHHhh
Confidence 6999999999 9999999999999999973
No 2
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=99.20 E-value=1.2e-11 Score=124.52 Aligned_cols=36 Identities=25% Similarity=0.249 Sum_probs=32.4
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeec
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (956)
++.++.++|.+||++|||+|..|||+||..||.|..
T Consensus 197 ~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~ 232 (235)
T 4gjz_A 197 KAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSF 232 (235)
T ss_dssp GCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEE
T ss_pred CCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEE
Confidence 357899999999999999999999999999887753
No 3
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=99.19 E-value=1e-10 Score=128.36 Aligned_cols=53 Identities=25% Similarity=0.336 Sum_probs=50.3
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHH
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEE 875 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteE 875 (956)
+..++.++|.+||++|||+|-.|||+||..||.|+..|+++.|+...+++|-+
T Consensus 252 ~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~ 304 (336)
T 3k2o_A 252 EFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVR 304 (336)
T ss_dssp GGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHH
T ss_pred cCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999964
No 4
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.09 E-value=1.1e-09 Score=121.77 Aligned_cols=88 Identities=18% Similarity=0.252 Sum_probs=72.2
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH-HHhcCCcchHHHHHHHHHHhhhhhhhhh
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVRQRKLFQEVG 902 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte-EfR~Lp~~H~aK~d~le~~~~~~~~~Vk 902 (956)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+...++..+ |-|. . +-+..-|--..
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~---------~---~~~~f~fp~F~ 281 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRL---------S---TADLFRFPNFE 281 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHH---------C-------CCCTTHH
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhc---------C---CCcccccccHH
Confidence 689999999999999999999999999999999999999999999998876 3222 1 22223355578
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 002177 903 KISLYAASSAIKEVQKLVLDP 923 (956)
Q Consensus 903 km~lyA~~~avke~~~l~~~~ 923 (956)
+|++|++...++.++.+.-+-
T Consensus 282 ~~~w~~~~~~~~~~~~~~~~~ 302 (371)
T 3k3o_A 282 TICWYVGKHILDIFRGLRENR 302 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999999876543
No 5
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.09 E-value=7.3e-10 Score=125.73 Aligned_cols=88 Identities=18% Similarity=0.243 Sum_probs=73.5
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH-HHhcCCcchHHHHHHHHHHhhhhhhhhh
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVRQRKLFQEVG 902 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte-EfR~Lp~~H~aK~d~le~~~~~~~~~Vk 902 (956)
.+++.++|..||++|||+|..|||.||..||-|+..|++..|+..-++..+ |-|.- |-+..-|--..
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~------------~~~~~~~p~f~ 365 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLS------------TADLFRFPNFE 365 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTT------------CCGGGSCTTHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcC------------CCccccccCHH
Confidence 589999999999999999999999999999999999999999999998876 43322 11222355578
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q 002177 903 KISLYAASSAIKEVQKLVLDP 923 (956)
Q Consensus 903 km~lyA~~~avke~~~l~~~~ 923 (956)
+|++|++...++.++.++-+.
T Consensus 366 ~~~w~~~~~~~~~~~~~~~~~ 386 (447)
T 3kv4_A 366 TICWYVGKHILDIFRGLRENR 386 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 899999999999999886654
No 6
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=99.03 E-value=3.8e-09 Score=120.02 Aligned_cols=85 Identities=14% Similarity=0.117 Sum_probs=66.7
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhhhhhh
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVRQRKLFQEV 901 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~le~~~~~~~~~V 901 (956)
+..+++.++|..||++|||+|.-|||.||..||-|+..|++.-|+..-+++++==+++. |-+...|--.
T Consensus 261 ~~~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~-----------v~~~~~~p~f 329 (451)
T 2yu1_A 261 RVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTR-----------VPNKFRYPFY 329 (451)
T ss_dssp HSSCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTT-----------CCTTSSCTTH
T ss_pred ccccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhC-----------CCccccCccH
Confidence 34578999999999999999999999999999999999999999999888765212221 1122334456
Q ss_pred hHHHHHHHHHHHHHHH
Q 002177 902 GKISLYAASSAIKEVQ 917 (956)
Q Consensus 902 kkm~lyA~~~avke~~ 917 (956)
..|++||+...++.+.
T Consensus 330 ~~~~w~~~~~~~~~~~ 345 (451)
T 2yu1_A 330 YEMCWYVLERYVYCIT 345 (451)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7899999988876653
No 7
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=98.97 E-value=1e-08 Score=114.77 Aligned_cols=88 Identities=20% Similarity=0.281 Sum_probs=71.6
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhhhhhhhH
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVRQRKLFQEVGK 903 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~le~~~~~~~~~Vkk 903 (956)
.+++.++|..||++|||+|..|+|.||..||-|...|+++.|+...++..+= |..+.+....-|-...+
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~-----------E~~~k~~~~~~fp~F~~ 310 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEM-----------EKRLKTPDLFKFPFFEA 310 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHH-----------HHHHTCGGGGGSTTHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHH-----------HHhcCCCccCcCccHHH
Confidence 5799999999999999999999999999999999999999999988876432 22233444444555778
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 002177 904 ISLYAASSAIKEVQKLVLD 922 (956)
Q Consensus 904 m~lyA~~~avke~~~l~~~ 922 (956)
|++|++..-++.++++.-|
T Consensus 311 ~~w~~a~~~l~~~~~~~~~ 329 (397)
T 3kv9_A 311 ICWFVAKNLLETLKELRED 329 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 8999999999988887643
No 8
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=98.96 E-value=2.4e-09 Score=122.80 Aligned_cols=88 Identities=20% Similarity=0.279 Sum_probs=69.0
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhhhhhhhH
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPNDHEAKLQVLEVRQRKLFQEVGK 903 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~~H~aK~d~le~~~~~~~~~Vkk 903 (956)
.+++.++|..||++|||+|..|||.||..||-|.-.|++..|+...++..+==+.|. +-...-|--..+
T Consensus 333 ~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~-----------~~~~~~~p~f~~ 401 (488)
T 3kv5_D 333 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLK-----------TPDLFKFPFFEA 401 (488)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTT-----------CCTTSSCTTHHH
T ss_pred cceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcC-----------CcccccCccHHH
Confidence 589999999999999999999999999999999999999999999887653222221 111222333567
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 002177 904 ISLYAASSAIKEVQKLVLD 922 (956)
Q Consensus 904 m~lyA~~~avke~~~l~~~ 922 (956)
|++|++..-++.++.+.-+
T Consensus 402 ~~w~~~~~~l~~~~~~~~~ 420 (488)
T 3kv5_D 402 ICWFVAKNLLETLKELRED 420 (488)
T ss_dssp HHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 7999999988888877643
No 9
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=98.92 E-value=1.2e-08 Score=114.07 Aligned_cols=86 Identities=17% Similarity=0.206 Sum_probs=70.5
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH-HHhcCCcchHHHHHHHHHHhhhhhhhh
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE-EIRCLPNDHEAKLQVLEVRQRKLFQEV 901 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte-EfR~Lp~~H~aK~d~le~~~~~~~~~V 901 (956)
..+++.++|..||++|||+|..|||.|+..||-|...||+..|+..-++..+ |-|.= +-+..-|--.
T Consensus 240 ~~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~------------~~~~f~fp~F 307 (392)
T 3pua_A 240 VDKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLK------------LGSLTQFPNF 307 (392)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHT------------CCCSSCCTTH
T ss_pred ccceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhC------------CCccCcCCCh
Confidence 3689999999999999999999999999999999999999999999888776 43321 1112234457
Q ss_pred hHHHHHHHHHHHHHHHHhc
Q 002177 902 GKISLYAASSAIKEVQKLV 920 (956)
Q Consensus 902 kkm~lyA~~~avke~~~l~ 920 (956)
.+|++|++...++.++.+.
T Consensus 308 ~~~~wy~~~~~l~~~~~~~ 326 (392)
T 3pua_A 308 ETACWYMGKHLLEAFKGSH 326 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 7889999999999888765
No 10
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=98.82 E-value=7.3e-09 Score=113.15 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=39.5
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
+.++.+++.+||++|||+|..|||+||..||.|..-|.++..
T Consensus 237 ~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~~ 278 (338)
T 3al5_A 237 ARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLPS 278 (338)
T ss_dssp CCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSCG
T ss_pred CCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCcc
Confidence 579999999999999999999999999999999999988874
No 11
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=98.74 E-value=3.2e-09 Score=116.58 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=36.5
Q ss_pred CccceEEEeecCceEEecCCCcccccccc-ccceeeccccC
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLF 862 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVS 862 (956)
.+.++.+++.+||++|||+|..|||+||. .++.|++.|..
T Consensus 257 ~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 257 NVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp GCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred cCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 35799999999999999999999999998 58999999866
No 12
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=98.16 E-value=9.8e-06 Score=93.45 Aligned_cols=51 Identities=20% Similarity=0.231 Sum_probs=46.8
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 874 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte 874 (956)
.....++|..||++|||+|..|+|.|+..||-|.-.||+..||..-+++++
T Consensus 363 ~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~ 413 (528)
T 3pur_A 363 GAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYH 413 (528)
T ss_dssp TCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHH
T ss_pred ccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHH
Confidence 345689999999999999999999999999999999999999999888654
No 13
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.67 E-value=0.00017 Score=83.62 Aligned_cols=86 Identities=17% Similarity=0.126 Sum_probs=72.6
Q ss_pred eeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccCCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002177 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (956)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 843 (956)
.+|=.-..++..|++++++++. .|. |...|+++.+. |+ +.||--+.|+|++||.|++++||
T Consensus 294 ~~Wy~VP~e~~~k~e~l~~k~~--------------~~~-~~~~~~~~p~~---L~-~~gIPvyr~vQkpGd~Vi~~Pga 354 (531)
T 3avr_A 294 CEWFVVPEGYWGVLNDFCEKNN--------------LNF-LMGSWWPNLED---LY-EANVPVYRFIQRPGDLVWINAGT 354 (531)
T ss_dssp EEEEEECGGGHHHHHHHHHHTT--------------CCT-TTSCBCCCHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred eEEEEeCHHHHHHHHHHHHHcC--------------CCh-hhceeecCHHH---HH-hCCCCeEEEEECCCCEEEECCCc
Confidence 5899999999999999998641 132 34567887654 33 45999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHHH
Q 002177 844 PFQVRNLQSTVQLGLDFLFPESVGE 868 (956)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~e 868 (956)
.|||.|+--|+++|..|..|.-+.-
T Consensus 355 yH~v~n~G~~~n~awN~a~~~~~q~ 379 (531)
T 3avr_A 355 VHWVQAIGWCNNIAWNVGPLTACQY 379 (531)
T ss_dssp EEEEEESSSEEEEEEEECCSSHHHH
T ss_pred eEEEEecceeeeeEEEeccCchHHH
Confidence 9999999999999999999997664
No 14
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=97.62 E-value=0.0001 Score=84.67 Aligned_cols=144 Identities=16% Similarity=0.163 Sum_probs=102.9
Q ss_pred eeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccCCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002177 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (956)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 843 (956)
-+|=.-..+...+++++++++. .+ ++...|+.+.+. ..+.||.-+.|+|++||.|++++|+
T Consensus 269 c~WY~VP~e~~~k~e~l~~k~~--------------~d-~l~~~~~pspe~----L~kagIPvyr~iQkPGdfVit~Pgt 329 (510)
T 4ask_A 269 CEWFAVHEHYWETISAFCDRHG--------------VD-YLTGSWWPILDD----LYASNIPVYRFVQRPGDLVWINAGT 329 (510)
T ss_dssp EEEEEECGGGHHHHHHHHHHTT--------------CC-TTTSCBCCCHHH----HHHTTCCCEEEEECTTCEEEECTTC
T ss_pred eeEEEECHHHHHHHHHHHHHhC--------------cc-hhhccccCCHHH----HHhCCCCeEEEEECCCCEEEECCCc
Confidence 4999999999999999998642 12 234667777663 3457999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHHHHHHH-HHHHhc-------CCcchH----HHHHHHHHHhhhhhhhhhHHHHHHHHH
Q 002177 844 PFQVRNLQSTVQLGLDFLFPESVGEAVRL-AEEIRC-------LPNDHE----AKLQVLEVRQRKLFQEVGKISLYAASS 911 (956)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~eC~rL-teEfR~-------Lp~~H~----aK~d~le~~~~~~~~~Vkkm~lyA~~~ 911 (956)
.|+|+|.-=|++||..|.-|-...--+.+ ..|... +|-.|- |+. + .+.+..+|..||.|.+-++..
T Consensus 330 yH~Vqs~Gf~~niaWNvap~t~~qlqlA~e~y~~n~~~~~~SivPm~~L~Wn~Ar~-~-k~~d~~l~~liK~~L~rSL~~ 407 (510)
T 4ask_A 330 VHWVQATGWCNNIAWNVGPLTAYQYQLALERYEWNEVKNVKSIVPMIHVSWNVART-V-KISDPDLFKMIKFCLLQSMKH 407 (510)
T ss_dssp EEEEEESSSEEEEEEEECBSSHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH-C-CCCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCeeeeeEEEecCCCHHHHHHHHHHHHHHHHhCcCcccChHHHHHHHHhh-h-hccCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888654432222 112211 222221 222 1 134557899999999999999
Q ss_pred HHHHHHHhccCCCCCccccc
Q 002177 912 AIKEVQKLVLDPKLGAELGF 931 (956)
Q Consensus 912 avke~~~l~~~~~~~~~~~~ 931 (956)
+..++..|.-+ |.+|.|
T Consensus 408 ~~~~~d~~~~~---g~~i~~ 424 (510)
T 4ask_A 408 CQVQRESLVRA---GKKIAY 424 (510)
T ss_dssp HHHHHHHHHHH---TCCEEE
T ss_pred HHHHHHHHHhC---CCEEee
Confidence 98888766543 444444
No 15
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.50 E-value=0.00017 Score=79.25 Aligned_cols=84 Identities=14% Similarity=0.127 Sum_probs=70.5
Q ss_pred eeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccCCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002177 764 AHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (956)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 843 (956)
-+|=.-..+...+++++++++. .| +|.+.+++..+. | .+.||--+.|+|++||.|+|++||
T Consensus 235 ~~Wy~VP~e~~~~~e~l~~k~~--------------~d-~~~~~~~~~p~~---L-~~~gIPvyr~~QkpGd~Vi~~Pga 295 (332)
T 2xxz_A 235 CEWFAVHEHYWETISAFCDRHG--------------VD-YLTGSWWPILDD---L-YASNIPVYRFVQRPGDLVWINAGT 295 (332)
T ss_dssp EEEEEECGGGHHHHHHHHHHTT--------------CC-TTTSCBCCCHHH---H-HHTTCCCEEEEECTTCEEEECTTC
T ss_pred eEEEEECHHHHHHHHHHHHhcC--------------Cc-hhhceecCCHHH---H-HhCCCCeEEEEECCCCEEEECCCc
Confidence 4999999999999999998631 12 234567777653 3 346999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCH
Q 002177 844 PFQVRNLQSTVQLGLDFLFPESV 866 (956)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV 866 (956)
-|||.|.--|+++|..|..|...
T Consensus 296 yH~v~n~G~~~n~awN~a~~~~~ 318 (332)
T 2xxz_A 296 VHWVQATGWCNNIAWNVGPLTAY 318 (332)
T ss_dssp EEEEEESSSEEEEEEEEESCTTG
T ss_pred eEEEEecceeeEEEEEeCCCcHH
Confidence 99999999999999999999865
No 16
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=95.84 E-value=0.0079 Score=66.75 Aligned_cols=92 Identities=18% Similarity=0.103 Sum_probs=76.9
Q ss_pred eeeeccCCChhHHHHHHHHHHHH-hCCCCCCCCCccCCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002177 765 HWDVFRRQDVPKLIEYLREHWTD-FGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (956)
Q Consensus 765 lWDIFrreDv~KLreyL~kh~~E-f~~~~~~~~~~v~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 843 (956)
+|=.-..++..|+++++++..-+ |+. ++ + =+|.+.+.++++. |+ +.||.-.+++|++||.|++-.|+
T Consensus 211 ~WY~VP~~~~~kfE~l~k~~~p~~~~~--c~--~----fL~h~~~lisP~~---L~-~~GIpv~~~vQ~pGEfViTfP~a 278 (354)
T 3dxt_A 211 TWYVVPPEHGQRLERLARELFPGSSRG--CG--A----FLRHKVALISPTV---LK-ENGIPFNRITQEAGEFMVTFPYG 278 (354)
T ss_dssp EEEEECGGGHHHHHHHHHHHSHHHHHH--CT--T----GGGGCCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEEeCHHHHHHHHHHHHHhCchhhhh--cH--H----HHhcCcccCCHHH---HH-HCCCceEEEEeCCCcEEEECCCc
Confidence 99999999999999999987532 221 11 1 2456788899873 44 47999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHHH
Q 002177 844 PFQVRNLQSTVQLGLDFLFPESVGE 868 (956)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~e 868 (956)
=|.|.|+--++..|..|..|+=+..
T Consensus 279 YH~gfn~Gfn~aEAvNFA~~~Wl~~ 303 (354)
T 3dxt_A 279 YHAGFNHGFNCAEAINFATPRWIDY 303 (354)
T ss_dssp EEEEEESSSEEEEEEEECCGGGHHH
T ss_pred eEEEeeccccHhHhhccCcHHHHHh
Confidence 9999999999999999999998764
No 17
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=95.40 E-value=0.022 Score=63.60 Aligned_cols=91 Identities=15% Similarity=0.182 Sum_probs=73.2
Q ss_pred eeeeccCCChhHHHHHHHHHHH-HhCCCCCCCCCccCCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002177 765 HWDVFRRQDVPKLIEYLREHWT-DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (956)
Q Consensus 765 lWDIFrreDv~KLreyL~kh~~-Ef~~~~~~~~~~v~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 843 (956)
+|=.-..++..|+++++++++- +|.. ++ + =+|...+.+++.. |+ +.||.-.+++|++||.|++=.|+
T Consensus 254 ~WY~VP~~~~~kfE~l~k~~~p~~~~~--c~--~----fL~h~~~lisP~~---L~-~~GIpv~r~vQ~pGEfViTfP~a 321 (373)
T 3opt_A 254 QWYSIPQEDRFKFYKFMQEQFPEEAKN--CP--E----FLRHKMFLASPKL---LQ-ENGIRCNEIVHHEGEFMITYPYG 321 (373)
T ss_dssp EEEECCGGGHHHHHHHHHHSSHHHHSS--CS--S----CTTTSCEEECHHH---HH-TTTCCCEEEEECTTCEEEECTTC
T ss_pred EEEEeCHHHHHHHHHHHHHhChhhhhh--CH--H----HhhCCcccCCHHH---HH-hcCCceEEEEECCCCEEEECCCc
Confidence 9999999999999999998753 4432 11 1 2345678888863 44 57999999999999999999999
Q ss_pred ccccccccccceeeccccCCCCHH
Q 002177 844 PFQVRNLQSTVQLGLDFLFPESVG 867 (956)
Q Consensus 844 PHQVRNLkSCIKVAlDFVSPEnV~ 867 (956)
=|.|.|+--++..|+.|..|+=+.
T Consensus 322 YH~gfn~Gfn~aEAvNFA~~~Wl~ 345 (373)
T 3opt_A 322 YHAGFNYGYNLAESVNFALEEWLP 345 (373)
T ss_dssp CEEEEESSSEEEEEEEECCC----
T ss_pred eEEEEecCccHHHHHccCcHHHHH
Confidence 999999999999999999887654
No 18
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=94.55 E-value=0.036 Score=62.10 Aligned_cols=93 Identities=12% Similarity=0.032 Sum_probs=76.6
Q ss_pred eeeeeccCCChhHHHHHHHHHHH-HhCCCCCCCCCccCCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCC
Q 002177 764 AHWDVFRRQDVPKLIEYLREHWT-DFGRPDGVTNDFVTHPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 842 (956)
Q Consensus 764 AlWDIFrreDv~KLreyL~kh~~-Ef~~~~~~~~~~v~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG 842 (956)
-+|=+-..++..|++++++++.- .|.. + .+=+|...+.++.+. |+ +.||.-.+++|++||.|++=.|
T Consensus 228 K~WY~VP~~~~~kfE~l~~~~~P~~~~~--~------~~~L~h~~~~isP~~---L~-~~GIpv~r~vQ~pGEfViTfP~ 295 (381)
T 2ox0_A 228 KSWYSVPPEHGKRLERLAKGFFPGSAQS--C------EAFLRHKMTLISPLM---LK-KYGIPFDKVTQEAGEFMITFPY 295 (381)
T ss_dssp EEEEEECGGGHHHHHHHHHHHSHHHHHH--C------TTGGGGSCEEECHHH---HH-HTTCCCEEEEECTTCEEEECTT
T ss_pred eEEEecCHHHHHHHHHHHHHhChhhhhc--c------hHHhhccccccCHHH---HH-HCCCceEEEEecCCCEEEECCC
Confidence 39999999999999999998743 3322 1 122456788888864 33 5799999999999999999999
Q ss_pred CccccccccccceeeccccCCCCHHH
Q 002177 843 CPFQVRNLQSTVQLGLDFLFPESVGE 868 (956)
Q Consensus 843 CPHQVRNLkSCIKVAlDFVSPEnV~e 868 (956)
+=|.|.|+--++..|+.|..|+=+..
T Consensus 296 aYH~gfn~GfN~aEAvNFA~~~Wl~~ 321 (381)
T 2ox0_A 296 GYHAGFNHGFNCAESTNFATRRWIEY 321 (381)
T ss_dssp CEEEEEECSSEEEEEEEECCTTHHHH
T ss_pred cEEEeecCcccHHHHhccCcHHHHHH
Confidence 99999999999999999988876654
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=94.25 E-value=0.057 Score=59.30 Aligned_cols=57 Identities=12% Similarity=0.188 Sum_probs=42.8
Q ss_pred ccceEEEeecCceEEecCCCccccccc--cccceeeccccCCCCHHHHHHH--------HHHHhcCCcch
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNL--QSTVQLGLDFLFPESVGEAVRL--------AEEIRCLPNDH 883 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNL--kSCIKVAlDFVSPEnV~eC~rL--------teEfR~Lp~~H 883 (956)
..++.++-.+||+.|||+|.+|+|+++ ..|+.|.+- +| +..+-+.- ..+||.||.+.
T Consensus 215 ~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~-~~~dll~~~l~~~~~~~~~~r~lp~~~ 281 (342)
T 1vrb_A 215 PDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QP-AWLDLMLAALRKKLISDNRFRELAVNH 281 (342)
T ss_dssp CSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CC-BHHHHHHHHHHHHHTTSGGGGSBCCCT
T ss_pred CCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CC-cHHHHHHHHHHHHHHhCHHhhhCCCcc
Confidence 567999999999999999999999999 468888877 55 33332221 23688887643
No 20
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.79 E-value=0.28 Score=41.21 Aligned_cols=46 Identities=22% Similarity=0.374 Sum_probs=34.2
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|--|...-...++. .|+ -.||..||..|.... ..||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~--~Cg-H~fC~~Ci~~~~~~~------~~CP~Cr~~ 58 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSL--PCK-HVFCYLCVKGASWLG------KRCALCRQE 58 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEE--TTT-EEEEHHHHHHCTTCS------SBCSSSCCB
T ss_pred CCCCCCccCCcccCCCEEc--cCC-CHHHHHHHHHHHHCC------CcCcCcCch
Confidence 4667899998765543332 588 479999999998642 689999874
No 21
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=90.76 E-value=0.12 Score=46.17 Aligned_cols=58 Identities=19% Similarity=0.354 Sum_probs=38.8
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
.|+ +++-+|+..-. -++.++.=++.=..||+++||+|.||+++|...|.-+.+ ++.||
T Consensus 57 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~v-~~~~~ 114 (115)
T 1yhf_A 57 SSP-GDAMVTILSGL-----AEITIDQETYRVAEGQTIVMPAGIPHALYAVEAFQMLLV-VVKPE 114 (115)
T ss_dssp CCS-SEEEEEEEESE-----EEEEETTEEEEEETTCEEEECTTSCEEEEESSCEEEEEE-EECSC
T ss_pred ECC-CcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCCEEEEECCCceEEEE-EEccC
Confidence 355 45666665442 123345556777899999999999999999886544433 44544
No 22
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=90.74 E-value=0.078 Score=48.62 Aligned_cols=24 Identities=21% Similarity=0.314 Sum_probs=20.6
Q ss_pred EEeecCceEEecCCCccccccccc
Q 002177 829 FEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
+.=..||.|+||||.||+++|.-.
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~~ 98 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTDG 98 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEECS
T ss_pred EEECCCCEEEECCCCcEEEEeCCC
Confidence 444679999999999999999864
No 23
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=90.40 E-value=0.098 Score=46.85 Aligned_cols=57 Identities=16% Similarity=0.197 Sum_probs=38.6
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
.|| ++|-+|+-.-. -++-|..=++.=..||+++||+|.||+++|...|. .+.+.+|.
T Consensus 51 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~v~~p~ 107 (116)
T 2pfw_A 51 AHR-HSQVSYVVEGE-----FHVNVDGVIKVLTAGDSFFVPPHVDHGAVCPTGGI--LIDTFSPA 107 (116)
T ss_dssp CCS-SEEEEEEEEEC-----EEEEETTEEEEECTTCEEEECTTCCEEEEESSCEE--EEEEEESC
T ss_pred ECC-cceEEEEEeeE-----EEEEECCEEEEeCCCCEEEECcCCceeeEeCCCcE--EEEEECCc
Confidence 456 56666664432 12334444677789999999999999999998763 34444553
No 24
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=90.06 E-value=0.17 Score=46.83 Aligned_cols=41 Identities=27% Similarity=0.138 Sum_probs=30.7
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
|..=++.=..||+|+||+|.||+++|...---+.+-+++|.
T Consensus 76 ~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~l~i~~~~ 116 (145)
T 3ht1_A 76 DQGRTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCE 116 (145)
T ss_dssp GGTEEEEECTTCEEEECTTCCBEEECCTTCCEEEEEEEESC
T ss_pred ECCEEEEECCCCEEEECCCCeEEeEcCCCCCEEEEEEECCC
Confidence 44556777889999999999999999876544455555554
No 25
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=89.85 E-value=0.13 Score=47.01 Aligned_cols=54 Identities=19% Similarity=0.293 Sum_probs=36.6
Q ss_pred CCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 805 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 805 DQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
++.+|+-.-. -++-|+.=++.=..||+|+||+|.||+++|...+. +.+-+|.|.
T Consensus 57 ~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~-~~~~~v~p~ 110 (114)
T 3fjs_A 57 PSTIQCLEGE-----VEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTS-LLVTVVLVD 110 (114)
T ss_dssp CEEEEEEESC-----EEEEETTEEEEECTTEEEEECTTCCEEEEESSSEE-EEEEEECC-
T ss_pred cEEEEEEECE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCcE-EEEEEEeCC
Confidence 4555554431 13445556778889999999999999999997653 344555554
No 26
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=89.75 E-value=0.11 Score=45.81 Aligned_cols=39 Identities=18% Similarity=0.175 Sum_probs=29.5
Q ss_pred Ccc-ceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002177 823 GVE-PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 823 GVE-pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (956)
.++ .=++.=..||+++||+|.+|+++|...+. .+..++|
T Consensus 69 ~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~--~l~~~~p 108 (110)
T 2q30_A 69 VGDGDAVIPAPRGAVLVAPISTPHGVRAVTDMK--VLVTIAP 108 (110)
T ss_dssp ECGGGCEEEECTTEEEEEETTSCEEEEESSSEE--EEEEEES
T ss_pred EeCCCEEEEECCCCEEEeCCCCcEEEEEcCCcE--EEEEECC
Confidence 344 45677789999999999999999998753 3444555
No 27
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=89.50 E-value=0.17 Score=46.02 Aligned_cols=38 Identities=11% Similarity=0.033 Sum_probs=29.2
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (956)
.=++.=..||+|+||+|.||+++|..+---+.+.+++|
T Consensus 78 ~~~~~l~~Gd~~~i~~~~~H~~~n~~~~~~~~l~v~~p 115 (125)
T 3h8u_A 78 GIVTHLKAGDIAIAKPGQVHGAMNSGPEPFIFVSVVAP 115 (125)
T ss_dssp TCEEEEETTEEEEECTTCCCEEEECSSSCEEEEEEEES
T ss_pred CeEEEeCCCCEEEECCCCEEEeEeCCCCCEEEEEEECC
Confidence 33555678999999999999999987654455555665
No 28
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=89.49 E-value=0.12 Score=46.62 Aligned_cols=24 Identities=25% Similarity=0.268 Sum_probs=20.9
Q ss_pred EEeecCceEEecCCCccccccccc
Q 002177 829 FEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
+.-..||++|||+|.+|++.|.-+
T Consensus 61 ~~l~~G~~~~ip~G~~H~~~N~g~ 84 (98)
T 3lag_A 61 AQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCBCTTCCEEECTTCEEEEBCCSS
T ss_pred EEecCCcEEEEcCCCcEECEECCC
Confidence 445789999999999999999864
No 29
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=89.28 E-value=0.59 Score=44.41 Aligned_cols=43 Identities=30% Similarity=0.813 Sum_probs=31.9
Q ss_pred CCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 194 QICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 194 ~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.+|-=|...-...++ ..|+. .||..||..|... ...||.||..
T Consensus 54 ~~C~iC~~~~~~~~~--~~CgH-~fc~~Ci~~~~~~------~~~CP~Cr~~ 96 (138)
T 4ayc_A 54 LQCIICSEYFIEAVT--LNCAH-SFCSYCINEWMKR------KIECPICRKD 96 (138)
T ss_dssp SBCTTTCSBCSSEEE--ETTSC-EEEHHHHHHHTTT------CSBCTTTCCB
T ss_pred CCCcccCcccCCceE--CCCCC-CccHHHHHHHHHc------CCcCCCCCCc
Confidence 468888866555443 36884 8999999999864 3469999874
No 30
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=89.26 E-value=0.18 Score=43.42 Aligned_cols=38 Identities=34% Similarity=0.328 Sum_probs=27.0
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (956)
.=++.=..||+++||+|.+|+++|...---+.+-+++|
T Consensus 66 ~~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~~~v~~p 103 (105)
T 1v70_A 66 EEEALLAPGMAAFAPAGAPHGVRNESASPALLLVVTAP 103 (105)
T ss_dssp TEEEEECTTCEEEECTTSCEEEECCSSSCEEEEEEEES
T ss_pred CEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEeCC
Confidence 34566679999999999999999986432233444444
No 31
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=89.19 E-value=0.22 Score=45.34 Aligned_cols=59 Identities=22% Similarity=0.240 Sum_probs=40.4
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
.|| ++|-+|+-.-. =++-|..-++.=..||+|+||+|.||.++|... --+.+.+++|-.
T Consensus 58 ~H~-~~e~~~vl~G~-----~~~~~~~~~~~l~~Gd~~~ip~~~~H~~~~~~~-~~~~l~v~~p~~ 116 (126)
T 4e2g_A 58 EHP-HEQAGVMLEGT-----LELTIGEETRVLRPGMAYTIPGGVRHRARTFED-GCLVLDIFSPPR 116 (126)
T ss_dssp CCS-SEEEEEEEEEC-----EEEEETTEEEEECTTEEEEECTTCCEEEECCTT-CEEEEEEEESCC
T ss_pred cCC-CceEEEEEEeE-----EEEEECCEEEEeCCCCEEEECCCCcEEeEECCC-CEEEEEEECCCC
Confidence 455 36666664442 123444556777899999999999999999988 334566666643
No 32
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.05 E-value=0.24 Score=42.61 Aligned_cols=48 Identities=25% Similarity=0.554 Sum_probs=36.0
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCccc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSCN 247 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~CN 247 (956)
.....|--|...-...++ ..|+ -.||..||..|+.. ...||.||..-+
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~------~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVV--TKCR-HYFCESCALEHFRA------TPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCSEEE--CTTS-CEEEHHHHHHHHHH------CSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcCeeE--ccCC-CHhHHHHHHHHHHC------CCcCCCcCcccc
Confidence 456789999876655443 5799 48999999999842 568999998554
No 33
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=87.84 E-value=0.19 Score=45.17 Aligned_cols=49 Identities=6% Similarity=0.005 Sum_probs=34.3
Q ss_pred cCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceee
Q 002177 804 YGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLG 857 (956)
Q Consensus 804 HDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVA 857 (956)
+++-+|+-.-. -++.|..=++.=..||+++||||.||.++|...|.=+.
T Consensus 58 ~~e~~~vl~G~-----~~~~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~ 106 (114)
T 2ozj_A 58 GDTLYLILQGE-----AVITFDDQKIDLVPEDVLMVPAHKIHAIAGKGRFKMLQ 106 (114)
T ss_dssp SCEEEEEEEEE-----EEEEETTEEEEECTTCEEEECTTCCBEEEEEEEEEEEE
T ss_pred CCeEEEEEeCE-----EEEEECCEEEEecCCCEEEECCCCcEEEEeCCCcEEEE
Confidence 35556654431 13455566777889999999999999999986654433
No 34
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=87.81 E-value=0.18 Score=45.41 Aligned_cols=39 Identities=15% Similarity=0.242 Sum_probs=27.6
Q ss_pred ceEE-EeecCceEEecCCCcccccccccc--ceeeccccCCC
Q 002177 826 PWSF-EQHLGEAVFIPAGCPFQVRNLQST--VQLGLDFLFPE 864 (956)
Q Consensus 826 pWtf-~Q~lGEAVFIPAGCPHQVRNLkSC--IKVAlDFVSPE 864 (956)
.-++ .=..||++|||+|.||+++|.... .-+.+.|-+|+
T Consensus 64 ~~~~~~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~ 105 (117)
T 2b8m_A 64 DQEPHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPK 105 (117)
T ss_dssp TSCCEEEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGG
T ss_pred CEEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCC
Confidence 3344 567899999999999999998753 33444444444
No 35
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=87.75 E-value=0.35 Score=50.75 Aligned_cols=50 Identities=8% Similarity=0.076 Sum_probs=39.3
Q ss_pred EEEeecCceEEecCCCccccccccccc-eeecccc----------CCCCHHHHHHHHHHHh
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTV-QLGLDFL----------FPESVGEAVRLAEEIR 877 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCI-KVAlDFV----------SPEnV~eC~rLteEfR 877 (956)
++.=..||.||||+|.||..+|.-.-- ++.+=++ +|..+.++|+...+..
T Consensus 103 ~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~~~~~~~~~~~~p~~~e~~f~~l~~~~ 163 (239)
T 2xlg_A 103 SIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWMRNEVAPDFPYHDGGMREYFQAVGPRI 163 (239)
T ss_dssp EEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEEECSSCTTCSCTTCSHHHHHHHHSCBC
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEEecccChhhccCcchHHHHHHHhhhhc
Confidence 788889999999999999999987532 3313334 8888999998887654
No 36
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=87.75 E-value=0.23 Score=54.41 Aligned_cols=40 Identities=20% Similarity=0.219 Sum_probs=34.6
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCC-CCHHH
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP-ESVGE 868 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP-EnV~e 868 (956)
++.=+.||+||||||.||+++|.... +..+=|.+| ..++.
T Consensus 292 ~~~l~~Gd~~~iPag~~h~~~~~~~~-~~~l~~~~g~~g~~~ 332 (350)
T 1juh_A 292 ATELGSGDVAFIPGGVEFKYYSEAYF-SKVLFVSSGSDGLDQ 332 (350)
T ss_dssp CEEECTTCEEEECTTCCEEEEESSSS-EEEEEEEESSSSHHH
T ss_pred EEEeCCCCEEEECCCCCEEEEecCCe-EEEEEEecCccchhh
Confidence 56668899999999999999998776 888888888 87776
No 37
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.62 E-value=0.31 Score=41.02 Aligned_cols=46 Identities=22% Similarity=0.535 Sum_probs=34.3
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-.. .+.-+.|+ -.||..||..|... ...||.||..
T Consensus 14 ~~~~C~IC~~~~~~-p~~~~~Cg-H~fC~~Ci~~~~~~------~~~CP~Cr~~ 59 (72)
T 2djb_A 14 PYILCSICKGYLID-ATTITECL-HTFCKSCIVRHFYY------SNRCPKCNIV 59 (72)
T ss_dssp GGGSCTTTSSCCSS-CEECSSSC-CEECHHHHHHHHHH------CSSCTTTCCC
T ss_pred CCCCCCCCChHHHC-cCEECCCC-CHHHHHHHHHHHHc------CCcCCCcCcc
Confidence 56789999765554 34445788 58999999999842 4689999874
No 38
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=87.61 E-value=0.22 Score=43.70 Aligned_cols=41 Identities=22% Similarity=0.327 Sum_probs=29.3
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
|..=++.=..||+++||+|.+|+.+|..+---+.+-+++|.
T Consensus 59 ~~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~v~~~~ 99 (113)
T 2gu9_A 59 VDGHTQALQAGSLIAIERGQAHEIRNTGDTPLKTVNFYHPP 99 (113)
T ss_dssp ETTEEEEECTTEEEEECTTCCEEEECCSSSCEEEEEEEESC
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCC
Confidence 34446677899999999999999999865333334444453
No 39
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=87.60 E-value=0.45 Score=40.40 Aligned_cols=52 Identities=25% Similarity=0.578 Sum_probs=36.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
....|.-|...-...++ ..|+ -.||..||..|+...........||.||...
T Consensus 18 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVS--ADCN-HSFCRACITLNYESNRNTDGKGNCPVCRVPY 69 (85)
T ss_dssp TTTSCTTTCSCCSSCEE--CTTS-CCBCHHHHHHHHHHSBCTTSCBCCTTTCCCC
T ss_pred cCCCCcCCChhhCccee--CCCC-CHHHHHHHHHHHHhccCCCCCCCCCCCCCcC
Confidence 56789999877655443 3588 4899999999976422123367899998753
No 40
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=87.53 E-value=0.25 Score=43.50 Aligned_cols=25 Identities=20% Similarity=0.187 Sum_probs=21.6
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
++.=..||+|+||+|.||+++|.-+
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g~ 84 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPSD 84 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCSS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCCC
Confidence 4556779999999999999999864
No 41
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=87.52 E-value=0.22 Score=48.97 Aligned_cols=59 Identities=15% Similarity=0.039 Sum_probs=40.7
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCcccccccc-ccceeeccccCCC
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGLDFLFPE 864 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAlDFVSPE 864 (956)
.|+ ++|-+|+-.-. -++-|..=++.=..||+||||+|.||+++|.. .---+.+-+++|+
T Consensus 73 ~H~-~~E~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~~l~i~~~~ 132 (167)
T 3ibm_A 73 RHE-HTHVVMVVRGH-----AEVVLDDRVEPLTPLDCVYIAPHAWHQIHATGANEPLGFLCIVDSD 132 (167)
T ss_dssp BCS-SCEEEEEEESE-----EEEEETTEEEEECTTCEEEECTTCCEEEEEESSSCCEEEEEEEESS
T ss_pred cCC-CcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCCCEEEEEEEeCC
Confidence 466 67777765542 12445555777789999999999999999987 4333344455665
No 42
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=87.08 E-value=0.29 Score=44.12 Aligned_cols=48 Identities=29% Similarity=0.712 Sum_probs=37.1
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
....|.-|...-. ..+.|..|+ -.||..||..|.... ...||.||..-
T Consensus 21 ~~~~C~IC~~~~~-~p~~~~~Cg-H~FC~~Ci~~~~~~~-----~~~CP~Cr~~~ 68 (100)
T 3lrq_A 21 EVFRCFICMEKLR-DARLCPHCS-KLCCFSCIRRWLTEQ-----RAQCPHCRAPL 68 (100)
T ss_dssp HHTBCTTTCSBCS-SEEECTTTC-CEEEHHHHHHHHHHT-----CSBCTTTCCBC
T ss_pred CCCCCccCCcccc-CccccCCCC-ChhhHHHHHHHHHHC-----cCCCCCCCCcC
Confidence 5678999986654 467788999 489999999997642 26899999844
No 43
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=87.03 E-value=0.29 Score=42.42 Aligned_cols=28 Identities=18% Similarity=0.232 Sum_probs=23.0
Q ss_pred EEEeecCceEEecCCCccccccccccce
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQ 855 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIK 855 (956)
++.=..||+|+||+|.+|+++|...|.=
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 96 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKI 96 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEE
Confidence 4555789999999999999999865543
No 44
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=87.02 E-value=0.34 Score=41.19 Aligned_cols=47 Identities=32% Similarity=0.708 Sum_probs=33.9
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|...-...++ -..|+ -.||..||..|.... -...||.||.
T Consensus 14 ~~~~C~IC~~~~~~p~~-~~~Cg-H~fC~~Ci~~~~~~~----~~~~CP~Cr~ 60 (74)
T 2yur_A 14 DELLCLICKDIMTDAVV-IPCCG-NSYCDECIRTALLES----DEHTCPTCHQ 60 (74)
T ss_dssp GGGSCSSSCCCCTTCEE-CSSSC-CEECTTHHHHHHHHS----SSSCCSSSCC
T ss_pred CCCCCcCCChHHhCCeE-cCCCC-CHHHHHHHHHHHHhc----CCCcCCCCCC
Confidence 56789999766555444 33399 589999999998531 1357999997
No 45
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=86.89 E-value=0.35 Score=40.90 Aligned_cols=53 Identities=21% Similarity=0.431 Sum_probs=36.4
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCc-hhhhhhcCCCCCCcc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIP-LEELEKVCPACRGSC 246 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~-~edv~~~CP~Crg~C 246 (956)
.....|--|...-...++ ..|+ -.||..||..|+.... .......||.||...
T Consensus 10 ~~~~~C~IC~~~~~~p~~--l~Cg-H~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~ 63 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLS--LDCG-HSLCRACITVSNKEAVTSMGGKSSCPVCGISY 63 (79)
T ss_dssp CCCCEETTTTEECSSCCC--CSSS-CCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCC
T ss_pred ccCCCCcCCCcccCCeeE--CCCC-CHHHHHHHHHHHHhcccCCCCCCcCCCCCCcC
Confidence 356788889876554433 3688 4899999999987521 112356899998753
No 46
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=86.75 E-value=0.21 Score=45.56 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=26.0
Q ss_pred ceEEEeecCceEEecCCCcccccccccccee
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQL 856 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKV 856 (956)
.-++.=..||+|+||+|.||+.+|....-|+
T Consensus 67 g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~ 97 (101)
T 1o5u_A 67 GKKYVIEKGDLVTFPKGLRCRWKVLEPVRKH 97 (101)
T ss_dssp CCEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred CCEEEECCCCEEEECCCCcEEEEeCCCeeEE
Confidence 5567788999999999999999998765443
No 47
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=86.63 E-value=0.39 Score=46.92 Aligned_cols=42 Identities=21% Similarity=0.071 Sum_probs=30.8
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
|..=++.=..||+||||+|.+|+++|..+---+-+-+++|+.
T Consensus 79 v~g~~~~l~~Gd~i~ip~~~~H~~~n~g~~~~~~l~i~~~~~ 120 (156)
T 3kgz_A 79 VGETISDVAQGDLVFIPPMTWHQFRANRGDCLGFLCVVNAAR 120 (156)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEECCSSSCEEEEEEEESSC
T ss_pred ECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEeCCC
Confidence 444466678899999999999999998764434455555553
No 48
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.04 E-value=0.46 Score=39.26 Aligned_cols=46 Identities=24% Similarity=0.595 Sum_probs=33.3
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-...++ ..|+ -.||..||..|... ....||.||..
T Consensus 14 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~ 59 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQ--TECG-HRFCESCMAALLSS-----SSPKCTACQES 59 (66)
T ss_dssp CCEECTTTCCEESSCCC--CSSS-CCCCHHHHHHHHTT-----SSCCCTTTCCC
T ss_pred cCCCCCCCChHhcCeeE--CCCC-CHHHHHHHHHHHHh-----CcCCCCCCCcC
Confidence 45678888766554443 5788 48999999999851 24579999863
No 49
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=85.83 E-value=0.29 Score=50.49 Aligned_cols=59 Identities=19% Similarity=0.243 Sum_probs=41.1
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
.|| +.|-+|+..-. -++.|..=++.=..||+|+||+|+||+++|...---+.+++++|-
T Consensus 163 ~H~-~~e~~~Vl~G~-----~~~~i~~~~~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~p~ 221 (243)
T 3h7j_A 163 KHR-NEQIGICIGGG-----YDMTVEGCTVEMKFGTAYFCEPREDHGAINRSEKESKSINIFFPP 221 (243)
T ss_dssp CCS-SEEEEEECSSC-----EEEEETTEEEEECTTCEEEECTTCCEEEEECSSSCEEEEEEEESC
T ss_pred eCC-CcEEEEEEECE-----EEEEECCEEEEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcCC
Confidence 455 46777766542 134444556677899999999999999999966545556666664
No 50
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=85.61 E-value=0.41 Score=37.74 Aligned_cols=46 Identities=22% Similarity=0.528 Sum_probs=33.7
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|...- ....+....|+ -.||..||..|... ...||.||.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~ 51 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCG-HLLHRTCYEEMLKE------GYRCPLCSG 51 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTS-CEEETTHHHHHHHH------TCCCTTSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCC-CcccHHHHHHHHHc------CCcCCCCCC
Confidence 345688887653 23456667798 48999999999753 278999985
No 51
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=85.07 E-value=0.34 Score=41.20 Aligned_cols=52 Identities=23% Similarity=0.566 Sum_probs=35.7
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
....|--|...-...++ ..|+ -.||..||..|+...........||.||...
T Consensus 18 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~ 69 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLS--LDCG-HSFCQACLTANHKKSMLDKGESSCPVCRISY 69 (85)
T ss_dssp CCCCCTTTCSCCSSCBC--CSSS-CCBCTTHHHHHHHHHHHTTSCCCCTTTCCSS
T ss_pred CCCCCCCCCcccCCcee--CCCC-CHHHHHHHHHHHHHhhcCCCCCcCCCCCCcc
Confidence 56789999876654433 3688 4899999999975311112357899998754
No 52
>2dip_A Zinc finger SWIM domain-containing protein 2; ZZ domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=85.01 E-value=0.28 Score=45.37 Aligned_cols=36 Identities=31% Similarity=0.724 Sum_probs=30.1
Q ss_pred ccccccCCCcc-ccccccccCCCC-CcchhhhhhHHhh
Q 002177 317 DEQMCCNICRI-PIIDYHRHCGNC-MYDLCLSCCQDLR 352 (956)
Q Consensus 317 DERvyCDnCkT-SIvD~HRSCp~C-sYDLCLsCC~ELR 352 (956)
-..+.||.|.. +|+-+--.|..| .||||..|-..-+
T Consensus 29 H~gv~Cd~C~~~pI~G~RykC~~C~d~DLC~~C~~~~~ 66 (98)
T 2dip_A 29 HLGIPCNNCKQFPIEGKCYKCTECIEYHLCQECFDSYC 66 (98)
T ss_dssp CCCCCCSSSCCSSCCSCEEEESSSSSCEEEHHHHHTTS
T ss_pred cCCCCCcCCCCCCcccCeEECCCCCCccHHHHHHccCC
Confidence 34599999996 899988889999 7999999976543
No 53
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=84.96 E-value=0.29 Score=43.83 Aligned_cols=37 Identities=35% Similarity=0.786 Sum_probs=30.7
Q ss_pred cccccccCCCcc-ccccccccCCCCC----cchhhhhhHHhh
Q 002177 316 ADEQMCCNICRI-PIIDYHRHCGNCM----YDLCLSCCQDLR 352 (956)
Q Consensus 316 ~DERvyCDnCkT-SIvD~HRSCp~Cs----YDLCLsCC~ELR 352 (956)
.-..+.||.|.. +|+-+--.|..|. ||||..|-...+
T Consensus 18 ~H~~~~Cd~C~~~pI~G~RykC~~C~d~~~yDLC~~C~~~g~ 59 (82)
T 2fc7_A 18 QHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSCSDCLH 59 (82)
T ss_dssp EESSCCCSSSCCSSEESCEEEESSSCSSSCCEEEGGGTTCCC
T ss_pred eeCcCCCCCCCCCcceeceEECCcCCCCcceecHHHHHhCcc
Confidence 345789999996 8999888899886 999999987544
No 54
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=84.45 E-value=0.35 Score=47.57 Aligned_cols=43 Identities=9% Similarity=-0.034 Sum_probs=33.4
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
+.|..=++.=..||+||||+|.||+.+|..+--- .+-++.|..
T Consensus 139 ~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~~ 181 (192)
T 1y9q_A 139 VFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPR 181 (192)
T ss_dssp EEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEECCC
T ss_pred EEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEecCc
Confidence 4556667788899999999999999999865333 666777754
No 55
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=84.13 E-value=0.31 Score=44.18 Aligned_cols=23 Identities=26% Similarity=0.313 Sum_probs=20.5
Q ss_pred EeecCceEEecCCCccccccccc
Q 002177 830 EQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 830 ~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
.=..||++|+|||.+|+++|--+
T Consensus 62 ~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 62 QLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CBCTTCCEEECTTCEEEEEECSS
T ss_pred EECCCCEEEECCCCceeCEECCC
Confidence 44689999999999999999766
No 56
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=83.95 E-value=0.8 Score=37.92 Aligned_cols=47 Identities=23% Similarity=0.545 Sum_probs=33.4
Q ss_pred cCCCCcccccccCC-CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|.-|...-. ...+....|+ -.||..||..|... ...||.||.
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~-H~fc~~Ci~~~~~~------~~~CP~Cr~ 59 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCM-HLFHQVCVDQWLIT------NKKCPICRV 59 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTS-CEEEHHHHHHHHHH------CSBCTTTCS
T ss_pred CCCCCCeeCCccccCCCcEEEeCCC-CHHHHHHHHHHHHc------CCCCcCcCc
Confidence 46678888876432 2345556788 47999999999753 346999986
No 57
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=83.93 E-value=0.93 Score=35.77 Aligned_cols=45 Identities=24% Similarity=0.771 Sum_probs=31.3
Q ss_pred CCCcccccccCCC--CeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 193 GQICHQCRRNDRE--RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 193 ~~~CHQCrqkt~~--~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
...|.-|...-.. ..+....|+ -.||..||..|... ...||.||.
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~C~-H~f~~~Ci~~w~~~------~~~CP~Cr~ 51 (55)
T 1iym_A 5 GVECAVCLAELEDGEEARFLPRCG-HGFHAECVDMWLGS------HSTCPLCRL 51 (55)
T ss_dssp SCCCTTTCCCCCTTSCCEECSSSC-CEECTTHHHHTTTT------CCSCSSSCC
T ss_pred CCcCccCCccccCCCceEECCCCC-CcccHHHHHHHHHc------CCcCcCCCC
Confidence 4567777655322 244555688 48999999999864 357999986
No 58
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=83.83 E-value=0.42 Score=45.92 Aligned_cols=25 Identities=24% Similarity=0.207 Sum_probs=23.2
Q ss_pred eEEEeecCceEEecCCCcccccccc
Q 002177 827 WSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
-++.=..||+|+||+|.||+++|..
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 7778889999999999999999986
No 59
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=83.70 E-value=0.29 Score=40.32 Aligned_cols=33 Identities=33% Similarity=0.888 Sum_probs=26.8
Q ss_pred ccccCCCccccccccccCCCC-CcchhhhhhHHhh
Q 002177 319 QMCCNICRIPIIDYHRHCGNC-MYDLCLSCCQDLR 352 (956)
Q Consensus 319 RvyCDnCkTSIvD~HRSCp~C-sYDLCLsCC~ELR 352 (956)
.+.||+|...| -..-.|..| .||||..|-..-.
T Consensus 6 ~~~Cd~C~~~i-g~R~~C~~C~dyDLC~~C~~~~~ 39 (52)
T 1tot_A 6 VYTCNECKHHV-ETRWHCTVCEDYDLCINCYNTKS 39 (52)
T ss_dssp CEEETTTTEEE-SSEEEESSSSSCEECHHHHHHHC
T ss_pred EEECCCCCCCC-cceEEcCCCCCchhHHHHHhCCC
Confidence 47899999996 566678888 6999999987643
No 60
>2e5r_A Dystrobrevin alpha; ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.69 E-value=0.36 Score=41.16 Aligned_cols=33 Identities=24% Similarity=0.789 Sum_probs=28.8
Q ss_pred cccCCCcc-ccccccccCCCC-CcchhhhhhHHhh
Q 002177 320 MCCNICRI-PIIDYHRHCGNC-MYDLCLSCCQDLR 352 (956)
Q Consensus 320 vyCDnCkT-SIvD~HRSCp~C-sYDLCLsCC~ELR 352 (956)
+.||.|.. +|+-+-=.|..| .||||..|-..-+
T Consensus 12 ~~Cd~C~~~pi~G~RykC~~C~d~DLC~~C~~~g~ 46 (63)
T 2e5r_A 12 VECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGH 46 (63)
T ss_dssp SCCSSSCCCSSCSCEEEESSCSSCEECHHHHHHCC
T ss_pred CCCcCCCCcceecceEEecCCCCchhHHHHHhCCC
Confidence 88999996 599988899998 7999999998644
No 61
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=83.61 E-value=0.56 Score=42.81 Aligned_cols=29 Identities=14% Similarity=0.110 Sum_probs=24.7
Q ss_pred CccceEEEeecCceEEecCCCcccccccc
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
.|..-++.=..||+||||+|.||+.+|..
T Consensus 62 ~i~~~~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 62 TIDGEKIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EETTEEEEEETTEEEEECTTCCEEEEEBT
T ss_pred EECCEEEEeCCCCEEEECCCCcEEEEcCC
Confidence 34556777889999999999999999984
No 62
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=83.24 E-value=0.54 Score=41.75 Aligned_cols=38 Identities=13% Similarity=0.147 Sum_probs=26.6
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCCCCHH
Q 002177 827 WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVG 867 (956)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~ 867 (956)
=++.=..||+++||+|.||..+|...|.=+ ++.|....
T Consensus 67 ~~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l---~i~~~~~~ 104 (107)
T 2i45_A 67 GSMTIREGEMAVVPKSVSHRPRSENGCSLV---LIELSDPS 104 (107)
T ss_dssp CEEEECTTEEEEECTTCCEEEEEEEEEEEE---EEECC---
T ss_pred cEEEECCCCEEEECCCCcEeeEeCCCeEEE---EEECCCcc
Confidence 467778899999999999999997654322 44555433
No 63
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=82.94 E-value=0.51 Score=45.18 Aligned_cols=40 Identities=15% Similarity=0.071 Sum_probs=30.0
Q ss_pred ccceEEEeecCceEEecCC-CccccccccccceeeccccCC
Q 002177 824 VEPWSFEQHLGEAVFIPAG-CPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAG-CPHQVRNLkSCIKVAlDFVSP 863 (956)
|..=++.=..||+|+||+| .+|+++|...---+.+-+.+|
T Consensus 83 ~~~~~~~l~~Gd~i~i~~~~~~H~~~n~~~~~~~~l~v~~p 123 (162)
T 3l2h_A 83 MENDQYPIAPGDFVGFPCHAAAHSISNDGTETLVCLVIGQR 123 (162)
T ss_dssp ETTEEEEECTTCEEEECTTSCCEEEECCSSSCEEEEEEEEC
T ss_pred ECCEEEEeCCCCEEEECCCCceEEeEeCCCCCEEEEEEECC
Confidence 4445677889999999998 999999976644444555555
No 64
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.83 E-value=1.6 Score=34.62 Aligned_cols=45 Identities=31% Similarity=0.944 Sum_probs=32.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPAC 242 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~C 242 (956)
....|--|...-...++ ..|+ -.||..||..|+... .....||.|
T Consensus 14 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVI--IECG-HNFCKACITRWWEDL---ERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCC--CSSC-CCCCHHHHHHHTTSS---CCSCCCSCC
T ss_pred cCCCCccCCcccCccEe--CCCC-CccCHHHHHHHHHhc---CCCCCCCCC
Confidence 56789999876655433 4688 479999999997642 135689988
No 65
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=82.76 E-value=0.69 Score=43.89 Aligned_cols=25 Identities=36% Similarity=0.340 Sum_probs=22.0
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
++.=..||+|+||+|.||+++|..+
T Consensus 89 ~~~l~~Gd~i~ip~g~~H~~~n~~~ 113 (148)
T 2oa2_A 89 QEEVFDDYAILIPAGTWHNVRNTGN 113 (148)
T ss_dssp EEEEETTCEEEECTTCEEEEEECSS
T ss_pred eEEECCCCEEEECCCCcEEEEECCC
Confidence 3677899999999999999999854
No 66
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.63 E-value=1.2 Score=37.70 Aligned_cols=48 Identities=31% Similarity=0.750 Sum_probs=33.6
Q ss_pred cCCCCcccccccCCC-CeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~-~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|.-|...-.. ..+.-..|+ -.||..||..|... ...||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 61 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCN-HLFHDSCIVPWLEQ------HDSCPVCRKS 61 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTS-CEEETTTTHHHHTT------TCSCTTTCCC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCC-CeecHHHHHHHHHc------CCcCcCcCCc
Confidence 356789999765432 233334588 48999999999853 2589999863
No 67
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=82.41 E-value=0.57 Score=46.29 Aligned_cols=42 Identities=19% Similarity=-0.100 Sum_probs=29.8
Q ss_pred CccceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
-|..=++.=..||+||||+|.+|+++|...---+.+-+++|+
T Consensus 87 ~v~g~~~~l~~GD~i~ip~g~~H~~~n~~~~~~~~l~i~~~~ 128 (166)
T 3jzv_A 87 MVGRAVSAVAPYDLVTIPGWSWHQFRAPADEALGFLCMVNAE 128 (166)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEECCTTSCEEEEEEEESS
T ss_pred EECCEEEEeCCCCEEEECCCCcEEeEeCCCCCEEEEEEEccC
Confidence 344556777889999999999999999765333334444554
No 68
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.14 E-value=0.81 Score=38.69 Aligned_cols=47 Identities=19% Similarity=0.753 Sum_probs=34.1
Q ss_pred cCCCCcccccccCC-CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|.-|...-. ...+....|+ -.||..||..|... ...||.||.
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~-H~fh~~Ci~~w~~~------~~~CP~Cr~ 68 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCN-HEFHAKCVDKWLKA------NRTCPICRA 68 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTT-EEEETTHHHHHHHH------CSSCTTTCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCC-CHhHHHHHHHHHHc------CCcCcCcCC
Confidence 35667888986542 3355566788 48999999999742 358999986
No 69
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=81.27 E-value=0.3 Score=48.69 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=35.4
Q ss_pred CCCCcCCceecCH--HHHHHHHHHhCccceEEEeecCceEEecCCCcccccc
Q 002177 800 THPLYGEVVYLNG--DHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN 849 (956)
Q Consensus 800 ~hPIHDQ~fYLt~--ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRN 849 (956)
.|+-+++.||+-. -. -++-|..=++.=+.||+|+||+|.+|++.+
T Consensus 62 ~H~~~~E~~yVLe~~G~-----g~v~idge~~~l~~GD~v~IPpg~~H~i~g 108 (157)
T 4h7l_A 62 YHREHQEIYVVLDHAAH-----ATIELNGQSYPLTKLLAISIPPLVRHRIVG 108 (157)
T ss_dssp BCSSCEEEEEEEEECTT-----CEEEETTEEEECCTTEEEEECTTCCEEEES
T ss_pred ECCCCcEEEEEEecCcE-----EEEEECCEEEEeCCCCEEEECCCCeEeeEC
Confidence 5777788888765 31 245566667888999999999999999985
No 70
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=80.85 E-value=0.62 Score=42.91 Aligned_cols=29 Identities=17% Similarity=0.029 Sum_probs=23.8
Q ss_pred ccceEEEeecCceEEecCCCccccccccc
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
|..=++.=..||+|+||+|.||+.+|..+
T Consensus 83 i~~~~~~l~~Gd~i~ip~g~~H~~~~~~~ 111 (126)
T 1vj2_A 83 KEQGEETVEEGFYIFVEPNEIHGFRNDTD 111 (126)
T ss_dssp CSSCEEEEETTEEEEECTTCCEEEECCSS
T ss_pred ECCEEEEECCCCEEEECCCCcEEeEeCCC
Confidence 44445666789999999999999999864
No 71
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=80.66 E-value=1.5 Score=39.88 Aligned_cols=56 Identities=14% Similarity=0.127 Sum_probs=35.9
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc--ccceeeccccCCCCHHHHHHHHHHHhcCCc
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ--STVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk--SCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (956)
+-|..=++.=..||+|+||+|.+|+++|.. .+.-+++ +++|+-+. .+..+...-|.
T Consensus 67 ~~i~~~~~~l~~Gd~~~i~~~~~H~~~~~~~~~~~~~~i-~f~~~~~~---~~~~~~~~~~~ 124 (128)
T 4i4a_A 67 IRINDEDFPVTKGDLIIIPLDSEHHVINNNQEDFHFYTI-WWDKESTL---NFLTRLEQDHH 124 (128)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEECSSSCEEEEEE-EECHHHHH---HHHHHHHHC--
T ss_pred EEECCEEEEECCCcEEEECCCCcEEeEeCCCCCEEEEEE-EECHHHHH---HHHHhcccccc
Confidence 445566777899999999999999999974 3343444 33454433 45555554444
No 72
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=80.63 E-value=0.74 Score=45.45 Aligned_cols=58 Identities=19% Similarity=0.291 Sum_probs=40.9
Q ss_pred CCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCH
Q 002177 802 PLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESV 866 (956)
Q Consensus 802 PIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV 866 (956)
.=+++.+|+-.-. -++-|.+=++.=..||+||||+|.+|..+|...|..+++ +.|-+.
T Consensus 82 ~~~eE~~yVLeG~-----~~l~i~g~~~~l~~GD~i~iP~G~~h~~~n~~~a~~l~V--~~P~~~ 139 (151)
T 4axo_A 82 LNYDEIDYVIDGT-----LDIIIDGRKVSASSGELIFIPKGSKIQFSVPDYARFIYV--TYPADW 139 (151)
T ss_dssp CSSEEEEEEEEEE-----EEEEETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE--EECSCC
T ss_pred CCCcEEEEEEEeE-----EEEEECCEEEEEcCCCEEEECCCCEEEEEeCCCEEEEEE--ECCCCc
Confidence 3356777765431 122345567888899999999999999999988877776 445443
No 73
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=80.48 E-value=0.89 Score=45.51 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=30.7
Q ss_pred cceEEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 825 EPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 825 EpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
+.+++.=..||+|+||+|.||+.+|..+--=+.+.+++|.
T Consensus 117 ~~~~~~l~~GD~v~ip~g~~H~~~N~g~~~~~~l~v~~~~ 156 (190)
T 1x82_A 117 DAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYPAD 156 (190)
T ss_dssp CEEEEEECTTCEEEECTTCEEEEEECSSSCEEEEEEEETT
T ss_pred cEEEEEECCCcEEEECCCCeEEEEECCcccEEEEEEECCC
Confidence 4566888999999999999999999876433445555554
No 74
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=80.34 E-value=0.75 Score=42.36 Aligned_cols=60 Identities=20% Similarity=0.250 Sum_probs=38.7
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccc-eEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEP-WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEp-Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
.|+-.++.+|+-.-. -++-+.. -++.=..||+|+||+|.||..+|...-. ..+-+++|..
T Consensus 60 ~H~~~~E~~~vl~G~-----~~~~~~~~~~~~l~~Gd~~~ip~g~~H~~~~~~~~~-~~l~~~~p~~ 120 (134)
T 2o8q_A 60 THTVGFQLFYVLRGW-----VEFEYEDIGAVMLEAGGSAFQPPGVRHRELRHSDDL-EVLEIVSPAG 120 (134)
T ss_dssp EECCSCEEEEEEESE-----EEEEETTTEEEEEETTCEEECCTTCCEEEEEECTTC-EEEEEESSTT
T ss_pred ECCCCcEEEEEEeCE-----EEEEECCcEEEEecCCCEEEECCCCcEEeEeCCCCe-EEEEEECCCc
Confidence 355546666654432 1233344 5777889999999999999999965423 3344556654
No 75
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=79.38 E-value=1.9 Score=38.34 Aligned_cols=46 Identities=24% Similarity=0.543 Sum_probs=34.1
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-.. -+....|+ -.||..||..|... ...||.||..
T Consensus 21 ~~~~C~IC~~~~~~-p~~~~~Cg-H~fC~~Ci~~~~~~------~~~CP~Cr~~ 66 (99)
T 2y43_A 21 DLLRCGICFEYFNI-AMIIPQCS-HNYCSLCIRKFLSY------KTQCPTCCVT 66 (99)
T ss_dssp HHTBCTTTCSBCSS-EEECTTTC-CEEEHHHHHHHHTT------CCBCTTTCCB
T ss_pred CCCCcccCChhhCC-cCEECCCC-CHhhHHHHHHHHHC------CCCCCCCCCc
Confidence 45678888765554 34446788 48999999999874 2589999874
No 76
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.24 E-value=1.1 Score=37.27 Aligned_cols=48 Identities=25% Similarity=0.468 Sum_probs=34.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-...++. .|+ -.||..||..|.... .....||.||..
T Consensus 19 ~~~~C~IC~~~~~~~~~~--~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTI--DCG-HNFCLKCITQIGETS---CGFFKCPLCKTS 66 (73)
T ss_dssp CCCBCTTTCSBCSSEEEC--TTC-CEEEHHHHHHHCSSS---CSCCCCSSSCCC
T ss_pred cCCEeccCCcccCCeEEc--CCC-ChhhHHHHHHHHHcC---CCCCCCCCCCCc
Confidence 567888898765543433 799 479999999998621 234689999874
No 77
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=79.22 E-value=1.6 Score=38.54 Aligned_cols=48 Identities=23% Similarity=0.565 Sum_probs=33.9
Q ss_pred cCCCCcccccccCC-CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|.-|...-. +..+....|+ -.||..||..|... ...||.||..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~-H~Fh~~Ci~~wl~~------~~~CP~Cr~~ 86 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCH-HYFHKPCVSIWLQK------SGTCPVCRCM 86 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTT-EEEEHHHHHHHHTT------TCBCTTTCCB
T ss_pred CCCCCCcccChhhcCCCcEEecCCC-ChHHHHHHHHHHHc------CCcCcCcCcc
Confidence 35667999975542 2344445688 48999999999864 2489999963
No 78
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=79.21 E-value=1.5 Score=37.36 Aligned_cols=41 Identities=24% Similarity=0.635 Sum_probs=31.7
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|.....+.++ ..|+...||..|+..| ..||.||.
T Consensus 23 ~~~~C~iC~~~~~~~~~--~pCgH~~~C~~C~~~~----------~~CP~Cr~ 63 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVF--VPCGHLVTCKQCAEAV----------DKCPMCYT 63 (74)
T ss_dssp HHTBCTTTSSSBCCEEE--ETTCCBCCCHHHHTTC----------SBCTTTCC
T ss_pred cCCCCCCCCCCCCCEEE--cCCCChhHHHHhhhcC----------ccCCCcCc
Confidence 45689999877665444 3688644999999987 68999996
No 79
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.06 E-value=1.9 Score=36.13 Aligned_cols=46 Identities=22% Similarity=0.619 Sum_probs=31.4
Q ss_pred CCCCcccccccCCC-CeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~-~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|...-.. ..+.-..|+ -.||..||..|... ...||.||.
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~-H~f~~~Ci~~~~~~------~~~CP~Cr~ 60 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCK-HAFHRKCLIKWLEV------RKVCPLCNM 60 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTT-EEEEHHHHHHHHHH------CSBCTTTCC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCC-CEecHHHHHHHHHc------CCcCCCcCc
Confidence 56678888876432 222223588 47999999999743 247999986
No 80
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=78.78 E-value=0.92 Score=42.30 Aligned_cols=37 Identities=19% Similarity=0.372 Sum_probs=26.9
Q ss_pred ceEEEeecCceEEecCCCccccccc-cccceeeccccCCC
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNL-QSTVQLGLDFLFPE 864 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNL-kSCIKVAlDFVSPE 864 (956)
.=++.=..||+||||||.+|..+|. ..+. .+--++|-
T Consensus 76 g~~~~l~~GD~v~ip~g~~H~~~~~~~~~~--~l~v~~P~ 113 (119)
T 3lwc_A 76 GETVTAGPGEIVYMPKGETVTIRSHEEGAL--TAYVTYPH 113 (119)
T ss_dssp TEEEEECTTCEEEECTTCEEEEEEEEEEEE--EEEEEECC
T ss_pred CEEEEECCCCEEEECCCCEEEEEcCCCCeE--EEEEECCC
Confidence 4466778999999999999999997 3333 33345553
No 81
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=78.12 E-value=1.5 Score=36.07 Aligned_cols=46 Identities=22% Similarity=0.706 Sum_probs=32.6
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|.-|...-.. .+....|+ -.||..||.+|... ...||.||..
T Consensus 4 ~~~~C~IC~~~~~~-~~~~~~C~-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 49 (68)
T 1chc_A 4 VAERCPICLEDPSN-YSMALPCL-HAFCYVCITRWIRQ------NPTCPLCKVP 49 (68)
T ss_dssp CCCCCSSCCSCCCS-CEEETTTT-EEESTTHHHHHHHH------SCSTTTTCCC
T ss_pred CCCCCeeCCccccC-CcEecCCC-CeeHHHHHHHHHhC------cCcCcCCChh
Confidence 35578888766443 23556798 47999999999742 3589999864
No 82
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.93 E-value=1.2 Score=36.51 Aligned_cols=48 Identities=23% Similarity=0.706 Sum_probs=33.8
Q ss_pred cCCCCcccccccCC-----CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~-----~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|--|...-. ...+.-..|+ -.||..||..|... ...||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSS-CEEEHHHHHHHHHH------CSSCTTTCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCC-ChhcHHHHHHHHHc------CCCCCCCCCc
Confidence 35667888876432 2333556788 48999999999753 4589999863
No 83
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=77.69 E-value=1 Score=44.32 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=32.4
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccc----eEEEeecCceEEecCCCccccccc
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEP----WSFEQHLGEAVFIPAGCPFQVRNL 850 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEp----Wtf~Q~lGEAVFIPAGCPHQVRNL 850 (956)
.||- ++.+|+-.-. -++.|.. =++.=..||+|+||+|.||+++|.
T Consensus 137 ~h~~-~E~~~Vl~G~-----~~~~~~~~~~~~~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 137 GHAG-NEFLFVLEGE-----IHMKWGDKENPKEALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp CCSS-CEEEEEEESC-----EEEEESCTTSCEEEEECTTCEEEECTTCCEEEEES
T ss_pred cCCC-eEEEEEEeee-----EEEEECCcCCcccEEECCCCEEEeCCCCceEEEec
Confidence 3443 5666664331 1344555 677888999999999999999998
No 84
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=77.52 E-value=2.2 Score=36.05 Aligned_cols=46 Identities=20% Similarity=0.329 Sum_probs=34.6
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|..--.+.++. .|+ -.||..||..|... -...||.||..
T Consensus 7 ~~~~C~IC~~~~~~Pv~~--~Cg-H~fc~~Ci~~~~~~-----~~~~CP~C~~~ 52 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIV--STG-QTYERSSIQKWLDA-----GHKTCPKSQET 52 (78)
T ss_dssp SSSSCTTTSCCCSSEEEE--TTT-EEEEHHHHHHHHTT-----TCCBCTTTCCB
T ss_pred ccCCCCCccccccCCEEc--CCC-CeecHHHHHHHHHH-----CcCCCCCCcCC
Confidence 567888898766655543 699 58999999999863 14679999863
No 85
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=77.43 E-value=1 Score=43.85 Aligned_cols=58 Identities=17% Similarity=0.009 Sum_probs=38.0
Q ss_pred CCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCC--CccccccccccceeeccccCC
Q 002177 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG--CPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 801 hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG--CPHQVRNLkSCIKVAlDFVSP 863 (956)
|+-.++-+|+..-. -++-|..=++.=..||+|+||+| .+|+++|..+---+.+-+.+|
T Consensus 62 H~~~eE~~~Vl~G~-----~~~~~~~~~~~l~~GD~i~ip~~~~~~H~~~n~~~~~~~~l~v~~p 121 (163)
T 3i7d_A 62 HMEQDEFVMVTEGA-----LVLVDDQGEHPMVPGDCAAFPAGDPNGHQFVNRTDAPATFLVVGTR 121 (163)
T ss_dssp ESSCCEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTCCCCBEEECCSSSCEEEEEEEEC
T ss_pred CCCCcEEEEEEECE-----EEEEECCEEEEeCCCCEEEECCCCCcceEEEECCCCCEEEEEEECC
Confidence 34335656655432 12334455777889999999999 999999986644444444444
No 86
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=77.12 E-value=0.82 Score=37.98 Aligned_cols=44 Identities=27% Similarity=0.830 Sum_probs=32.4
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|--|...-.. .-..|+ -.||..||..|... ...||.||.
T Consensus 13 ~~~~~C~IC~~~~~~---~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~ 56 (70)
T 2ecn_A 13 TDEEECCICMDGRAD---LILPCA-HSFCQKCIDKWSDR------HRNCPICRL 56 (70)
T ss_dssp CCCCCCSSSCCSCCS---EEETTT-EEECHHHHHHSSCC------CSSCHHHHH
T ss_pred CCCCCCeeCCcCccC---cccCCC-CcccHHHHHHHHHC------cCcCCCcCC
Confidence 356789999877655 224688 47999999999863 467998874
No 87
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=77.11 E-value=1.8 Score=39.11 Aligned_cols=46 Identities=22% Similarity=0.594 Sum_probs=34.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-.. -+....|+ -.||..||..|.... ..||.||..
T Consensus 14 ~~~~C~IC~~~~~~-p~~~~~Cg-H~fC~~Ci~~~~~~~------~~CP~Cr~~ 59 (108)
T 2ckl_A 14 PHLMCVLCGGYFID-ATTIIECL-HSFCKTCIVRYLETS------KYCPICDVQ 59 (108)
T ss_dssp GGTBCTTTSSBCSS-EEEETTTC-CEEEHHHHHHHHTSC------SBCTTTCCB
T ss_pred CcCCCccCChHHhC-cCEeCCCC-ChhhHHHHHHHHHhC------CcCcCCCcc
Confidence 56678889765544 44556798 589999999998752 679999874
No 88
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=77.09 E-value=0.89 Score=46.46 Aligned_cols=48 Identities=21% Similarity=0.303 Sum_probs=35.2
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCcccccc-cccc
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRN-LQST 853 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRN-LkSC 853 (956)
.|| ++|.+|+-.-. -++.|..=++.=..||+|+||||+||.++| ...|
T Consensus 170 ~H~-~~e~~~Vl~G~-----~~~~i~g~~~~l~~Gd~i~ip~~~~H~~~~~~~~~ 218 (227)
T 3rns_A 170 KAP-GDALVTVLDGE-----GKYYVDGKPFIVKKGESAVLPANIPHAVEAETENF 218 (227)
T ss_dssp CCS-SEEEEEEEEEE-----EEEEETTEEEEEETTEEEEECTTSCEEEECCSSCE
T ss_pred ECC-CcEEEEEEeEE-----EEEEECCEEEEECCCCEEEECCCCcEEEEeCCCCE
Confidence 466 56777765542 234455557777899999999999999999 7654
No 89
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=76.79 E-value=0.87 Score=43.02 Aligned_cols=30 Identities=13% Similarity=0.187 Sum_probs=25.4
Q ss_pred EEeecCceEEecCCCccccccccccceeec
Q 002177 829 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (956)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (956)
+.=..||+|+||+|.||..+|....-|+-+
T Consensus 89 ~~l~~GD~~~ip~g~~h~~~~~~~~rK~yv 118 (123)
T 3bcw_A 89 HAVKAGDAFIMPEGYTGRWEVDRHVKKIYF 118 (123)
T ss_dssp EEEETTCEEEECTTCCCEEEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEECCceeEEEE
Confidence 445789999999999999999988777643
No 90
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=76.74 E-value=1.1 Score=47.50 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=46.3
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHH
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL 872 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL 872 (956)
.||-.++-+|+-.-. -++.|..-++.=..||.++||+|+||+.+|... --..+-+++|....+-++-
T Consensus 235 ~H~~~~e~~~vl~G~-----~~~~i~~~~~~l~~GD~~~ip~~~~H~~~n~~~-~~~~l~v~~~~~~~~~~~~ 301 (337)
T 1y3t_A 235 YHEYHTETFYCLEGQ-----MTMWTDGQEIQLNPGDFLHVPANTVHSYRLDSH-YTKMVGVLVPGLFEPFFRT 301 (337)
T ss_dssp ECSSCEEEEEEEESC-----EEEEETTEEEEECTTCEEEECTTCCEEEEECSS-SEEEEEEEESSTTTHHHHH
T ss_pred CCCCCcEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCeEEEEECCC-CeEEEEEEcCccHHHHHHH
Confidence 344334555554432 134455667888999999999999999999976 4445566788887765543
No 91
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=76.59 E-value=1.7 Score=43.57 Aligned_cols=39 Identities=21% Similarity=0.139 Sum_probs=29.8
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 827 WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
+++.=..||+++||+|.+|.++|.-.---+.+-+.++.+
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g~~~~~~l~v~~~~~ 157 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVGKTEAYMVVSFNSQN 157 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECSSSCEEEEEEESSSC
T ss_pred EEEEECCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCC
Confidence 366778899999999999999998654444555566555
No 92
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=75.92 E-value=1.7 Score=39.59 Aligned_cols=46 Identities=24% Similarity=0.539 Sum_probs=33.9
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|.-|...-...++. .|+ -.||..||..|... -...||.||..
T Consensus 14 ~~~~C~iC~~~~~~p~~~--~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~ 59 (115)
T 3l11_A 14 SECQCGICMEILVEPVTL--PCN-HTLCKPCFQSTVEK-----ASLCCPFCRRR 59 (115)
T ss_dssp HHHBCTTTCSBCSSCEEC--TTS-CEECHHHHCCCCCT-----TTSBCTTTCCB
T ss_pred CCCCCccCCcccCceeEc--CCC-CHHhHHHHHHHHhH-----CcCCCCCCCcc
Confidence 456788888666555543 798 48999999999853 13679999873
No 93
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=75.86 E-value=1.3 Score=36.56 Aligned_cols=48 Identities=23% Similarity=0.706 Sum_probs=34.2
Q ss_pred cCCCCcccccccCC-----CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~-----~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|--|...-. +..+....|+ -.||..||..|... ...||.||..
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 60 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRKK 60 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECTTS-CEEEHHHHHHHHHH------CSBCTTTCCB
T ss_pred CCCCCCcccChhhhccccccCCeEeCCCC-ChHhHHHHHHHHHc------CCCCCCCCCc
Confidence 45667888876532 2344566798 48999999999753 2589999874
No 94
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=75.76 E-value=2.9 Score=35.83 Aligned_cols=49 Identities=22% Similarity=0.516 Sum_probs=36.2
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
..+..|..|++. +.++.|-.|. ..|=..||.-.-..+. +-.|.||.|..
T Consensus 10 ~~~~~C~vC~~~--~~ll~Cd~C~-~~~H~~Cl~P~l~~~P--~g~W~C~~C~~ 58 (66)
T 2lri_C 10 APGARCGVCGDG--TDVLRCTHCA-AAFHWRCHFPAGTSRP--GTGLRCRSCSG 58 (66)
T ss_dssp CTTCCCTTTSCC--TTCEECSSSC-CEECHHHHCTTTCCCC--SSSCCCTTTTT
T ss_pred CCCCCcCCCCCC--CeEEECCCCC-CceecccCCCccCcCC--CCCEECccccC
Confidence 356679999864 4599999999 5899999964433332 23699999975
No 95
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=75.46 E-value=1.5 Score=42.53 Aligned_cols=48 Identities=25% Similarity=0.556 Sum_probs=35.2
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
...+|--|...-. ..+.+..|+ -.||..||..|... ....||.||...
T Consensus 53 ~~~~C~IC~~~~~-~p~~~~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 53 SELMCPICLDMLK-NTMTTKECL-HRFCADCIITALRS-----GNKECPTCRKKL 100 (165)
T ss_dssp HHHBCTTTSSBCS-SEEEETTTC-CEEEHHHHHHHHHT-----TCCBCTTTCCBC
T ss_pred CCCCCcccChHhh-CcCEeCCCC-ChhHHHHHHHHHHh-----CcCCCCCCCCcC
Confidence 4568888965544 355666899 48999999999753 146799999754
No 96
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=75.42 E-value=1.1 Score=41.52 Aligned_cols=47 Identities=21% Similarity=0.506 Sum_probs=33.9
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
....|.-|...-...++ ..|+ -.||..||..|... ....||.||...
T Consensus 51 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~~ 97 (124)
T 3fl2_A 51 ETFQCICCQELVFRPIT--TVCQ-HNVCKDCLDRSFRA-----QVFSCPACRYDL 97 (124)
T ss_dssp HHTBCTTTSSBCSSEEE--CTTS-CEEEHHHHHHHHHT-----TCCBCTTTCCBC
T ss_pred cCCCCCcCChHHcCcEE--eeCC-CcccHHHHHHHHhH-----CcCCCCCCCccC
Confidence 45679999866555444 3798 48999999999852 234799999744
No 97
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=75.07 E-value=1.8 Score=37.85 Aligned_cols=49 Identities=31% Similarity=0.686 Sum_probs=34.9
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|.-|...-.+.++ -..|+ -.||..||..|+... -...||.||..
T Consensus 11 ~~~~~C~IC~~~~~~p~~-~~~Cg-H~fC~~Ci~~~~~~~----~~~~CP~Cr~~ 59 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVV-IPCCG-NSYCDECIRTALLES----DEHTCPTCHQN 59 (92)
T ss_dssp CTTTEETTTTEECSSCEE-CTTTC-CEECHHHHHHHHHHC----TTCCCTTTCCS
T ss_pred CcCCCCCCCChhhcCceE-CCCCC-CHHHHHHHHHHHHhc----CCCcCcCCCCc
Confidence 366789999976655443 33488 489999999997421 13689999864
No 98
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=74.82 E-value=1.4 Score=42.93 Aligned_cols=47 Identities=23% Similarity=0.570 Sum_probs=34.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
....|--|...-...++ ..|+ -.||..||..|... -...||.||...
T Consensus 77 ~~~~C~IC~~~~~~pv~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~~ 123 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVT--TECF-HNVCKDCLQRSFKA-----QVFSCPACRHDL 123 (150)
T ss_dssp HHTBCTTTSSBCSSEEE--CTTS-CEEEHHHHHHHHHT-----TCCBCTTTCCBC
T ss_pred cCCEeecCChhhcCCEE--cCCC-CchhHHHHHHHHHh-----CCCcCCCCCccC
Confidence 44679999876655554 5899 48999999999853 234799998754
No 99
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.70 E-value=1.7 Score=37.30 Aligned_cols=51 Identities=18% Similarity=0.340 Sum_probs=34.5
Q ss_pred cCCCCcccccccCCC--CeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDRE--RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~--~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|--|...-.. ....-..|+ -.||..||..|.... .....||.||..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~Cr~~ 65 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLHCG-HTICRQCLEKLLASS---INGVRCPFCSKI 65 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECSSS-CEEEHHHHHHHHHHC---SSCBCCTTTCCC
T ss_pred cCCCCCccCCccccccCCCeEECCCC-ChhhHHHHHHHHHcC---CCCcCCCCCCCc
Confidence 356778888866543 112333688 489999999997531 124689999875
No 100
>1qwr_A Mannose-6-phosphate isomerase; structural genomics, D-mannose 6-phosphate, PSI, protein structure initiative; 1.80A {Bacillus subtilis} SCOP: b.82.1.3
Probab=74.42 E-value=1 Score=48.97 Aligned_cols=18 Identities=17% Similarity=0.414 Sum_probs=15.4
Q ss_pred eecCceEEecCCCccccc
Q 002177 831 QHLGEAVFIPAGCPFQVR 848 (956)
Q Consensus 831 Q~lGEAVFIPAGCPHQVR 848 (956)
=++|||+|||||.||=.-
T Consensus 162 l~pGd~~~ipaGt~HA~~ 179 (319)
T 1qwr_A 162 IKPGDFYYVPSGTLHALC 179 (319)
T ss_dssp CCTTCEEEECTTCCEEEC
T ss_pred cCCCCEEEcCCCCceEec
Confidence 358999999999999743
No 101
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=74.10 E-value=1.8 Score=41.33 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=25.7
Q ss_pred EEeecCceEEecCCCccccccccccceeeccccCC
Q 002177 829 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (956)
+.=..||+|+||+|.||+.+|....--+.+-++.|
T Consensus 89 ~~l~~Gd~i~ip~~~~H~~~n~~~~~~~~l~v~~~ 123 (147)
T 2f4p_A 89 RILKKGDVVEIPPNVVHWHGAAPDEELVHIGISTQ 123 (147)
T ss_dssp EEEETTCEEEECTTCCEEEEEBTTBCEEEEEEECC
T ss_pred EEECCCCEEEECCCCcEEeEeCCCCCEEEEEEEcc
Confidence 55679999999999999999986543333444443
No 102
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.49 E-value=4.4 Score=35.12 Aligned_cols=31 Identities=26% Similarity=0.794 Sum_probs=23.5
Q ss_pred EEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 208 VWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 208 v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
+.-..|+ -.|+..||..|.... ..||.||..
T Consensus 43 ~~~~~C~-H~FH~~Ci~~Wl~~~------~~CP~CR~~ 73 (81)
T 2ecl_A 43 VVWGECN-HSFHNCCMSLWVKQN------NRCPLCQQD 73 (81)
T ss_dssp EEEETTS-CEEEHHHHHHHTTTC------CBCTTTCCB
T ss_pred EEeCCCC-CccChHHHHHHHHhC------CCCCCcCCC
Confidence 3334688 589999999998753 389999963
No 103
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=73.45 E-value=1.1 Score=48.35 Aligned_cols=19 Identities=21% Similarity=0.244 Sum_probs=15.8
Q ss_pred EeecCceEEecCCCccccc
Q 002177 830 EQHLGEAVFIPAGCPFQVR 848 (956)
Q Consensus 830 ~Q~lGEAVFIPAGCPHQVR 848 (956)
.=++|||+|||||.||=.-
T Consensus 161 ~l~pGd~~~ipaGt~HA~~ 179 (300)
T 1zx5_A 161 ETTPYDTFVIRPGIPHAGE 179 (300)
T ss_dssp ECCTTCEEEECTTCCEEEE
T ss_pred ECCCCCEEEcCCCCceEcC
Confidence 3468999999999999743
No 104
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=72.49 E-value=1.3 Score=41.27 Aligned_cols=31 Identities=16% Similarity=0.242 Sum_probs=25.5
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
+.|..-++.=..||+++||+|.||+.+|...
T Consensus 91 ~~i~~~~~~l~~Gd~i~i~~~~~H~~~n~~~ 121 (133)
T 1o4t_A 91 FHDNGKDVPIKAGDVCFTDSGESHSIENTGN 121 (133)
T ss_dssp EEETTEEEEEETTEEEEECTTCEEEEECCSS
T ss_pred EEECCEEEEeCCCcEEEECCCCcEEeEECCC
Confidence 3455567777899999999999999999754
No 105
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=72.21 E-value=1.1 Score=36.10 Aligned_cols=32 Identities=22% Similarity=0.818 Sum_probs=24.2
Q ss_pred eEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 207 VVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 207 ~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.+....|+ -.||..||..|... ...||.||..
T Consensus 22 ~~~~~~Cg-H~fc~~Ci~~~~~~------~~~CP~Cr~~ 53 (64)
T 2xeu_A 22 LIVSTECG-HVFCSQCLRDSLKN------ANTCPTCRKK 53 (64)
T ss_dssp CEEEETTS-CEEEHHHHHHHHHH------CSBCTTTCCB
T ss_pred CEEeCCCC-CchhHHHHHHHHHc------CCCCCCCCcc
Confidence 34556788 48999999999753 4589999874
No 106
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=71.93 E-value=1.7 Score=39.13 Aligned_cols=48 Identities=25% Similarity=0.542 Sum_probs=33.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-...++ ..|+ -.||..||..|.... .....||.||..
T Consensus 20 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~---~~~~~CP~Cr~~ 67 (112)
T 1jm7_A 20 KILECPICLELIKEPVS--TKCD-HIFCKFCMLKLLNQK---KGPSQCPLCKND 67 (112)
T ss_dssp HHTSCSSSCCCCSSCCB--CTTS-CCCCSHHHHHHHHSS---SSSCCCTTTSCC
T ss_pred CCCCCcccChhhcCeEE--CCCC-CHHHHHHHHHHHHhC---CCCCCCcCCCCc
Confidence 34578888765554433 4788 489999999998642 123579999864
No 107
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=70.64 E-value=1.5 Score=44.87 Aligned_cols=54 Identities=11% Similarity=0.042 Sum_probs=39.9
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeecc
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLD 859 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlD 859 (956)
.|| +++.+|+-.- .=++.|..=++.=..||.++||||.||-++|+..|+=+...
T Consensus 54 ~h~-~~~~~~Vl~G-----~~~~~i~~~~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i~ 107 (227)
T 3rns_A 54 AML-GNRYYYCFNG-----NGEIFIENNKKTISNGDFLEITANHNYSIEARDNLKLIEIG 107 (227)
T ss_dssp SCS-SCEEEEEEES-----EEEEEESSCEEEEETTEEEEECSSCCEEEEESSSEEEEEEE
T ss_pred ccC-CCEEEEEEeC-----EEEEEECCEEEEECCCCEEEECCCCCEEEEECCCcEEEEEE
Confidence 466 7888887554 12344555566778899999999999999999887655443
No 108
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=70.54 E-value=1.3 Score=45.96 Aligned_cols=47 Identities=9% Similarity=0.067 Sum_probs=32.9
Q ss_pred CCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002177 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 801 hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
|+-.++-+|+-.- .-++.|..=++.=..||+||||+|+||+.+|.-.
T Consensus 197 H~~~~E~~~Vl~G-----~~~~~i~~~~~~l~~GD~i~~~~~~~H~~~n~g~ 243 (261)
T 1rc6_A 197 THVQEHGAYILSG-----QGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGR 243 (261)
T ss_dssp EESSCEEEEEEES-----EEEEESSSCEEEEETTCEEEECSSEEEEEEEC--
T ss_pred CCCceEEEEEEEe-----EEEEEECCEEEEeCCCCEEEECCCCcEEeEeCCC
Confidence 4444556666443 1245566667888999999999999999999854
No 109
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=70.06 E-value=3.2 Score=41.60 Aligned_cols=50 Identities=18% Similarity=0.442 Sum_probs=40.5
Q ss_pred CCCCcccccccCCCCeEEcC--cCCCccccHhHHhhhcCCCchhhh----hhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCV--KCDKRGYCDSCISTWYSDIPLEEL----EKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~--~C~r~~FC~~CL~~rY~e~~~edv----~~~CP~Crg 244 (956)
....|.+|-... .++.|. +|.+ .||..||....+.-+.+++ .|.|=.|.-
T Consensus 78 ~~~yC~wC~~Gg--~l~~Cdn~~C~r-~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 78 YQSYCTICCGGR--EVLMCGNNNCCR-CFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp SBSSCTTTSCCS--EEEECSSTTTCC-EEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred CcceeeEecCCC--eEEeeCCCCCCC-chhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 456899999754 599999 6995 9999999999998666654 599988864
No 110
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=69.74 E-value=1.7 Score=46.81 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=36.5
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCc
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (956)
++.=..||+++||+|+||+++|..+--=+.+-|++|.+... +.|++=++.+|.
T Consensus 279 ~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ 331 (361)
T 2vqa_A 279 VSRLQQGDVGYVPKGYGHAIRNSSQKPLDIVVVFNDGDYQS-IDLSTWLASNPS 331 (361)
T ss_dssp EEEECTTCEEEECTTCEEEEECCSSSCEEEEEEESSSSCCC-EEHHHHHHTSCH
T ss_pred EEEECCCCEEEECCCCeEEeEECCCCCEEEEEEECCCCcce-eeHHHHhhhCCH
Confidence 56667899999999999999998653334555566654322 234456777776
No 111
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=69.61 E-value=2.6 Score=38.78 Aligned_cols=44 Identities=27% Similarity=0.620 Sum_probs=33.0
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
...+|--|...-...++ -..|+ -.||..||..|.. ..||.||..
T Consensus 21 ~~~~C~IC~~~~~~pv~-~~~Cg-H~fC~~Ci~~~~~--------~~CP~Cr~~ 64 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVC-LGGCE-HIFCSNCVSDCIG--------TGCPVCYTP 64 (117)
T ss_dssp HTTSCSSSCSCCSSCBC-CCSSS-CCBCTTTGGGGTT--------TBCSSSCCB
T ss_pred hCCCCCCCChHhhCccE-eCCCC-CHHHHHHHHHHhc--------CCCcCCCCc
Confidence 56789999765554332 22688 5899999999976 679999986
No 112
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=69.25 E-value=2 Score=44.23 Aligned_cols=47 Identities=15% Similarity=0.116 Sum_probs=33.8
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEE-ecCCCccccccccc
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVF-IPAGCPFQVRNLQS 852 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVF-IPAGCPHQVRNLkS 852 (956)
.|| +.|-+|+-.-. =++-|..=++.=..||+|| ||+|.||+++|...
T Consensus 51 ~H~-~~e~~~Vl~G~-----~~~~~~~~~~~l~~Gd~i~~ip~~~~H~~~n~~~ 98 (243)
T 3h7j_A 51 QHK-EVQIGMVVSGE-----LMMTVGDVTRKMTALESAYIAPPHVPHGARNDTD 98 (243)
T ss_dssp CCS-SEEEEEEEESE-----EEEEETTEEEEEETTTCEEEECTTCCEEEEECSS
T ss_pred ECC-CcEEEEEEEeE-----EEEEECCEEEEECCCCEEEEcCCCCcEeeEeCCC
Confidence 466 56777765432 1234445566778999997 99999999999887
No 113
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=69.18 E-value=3.4 Score=37.79 Aligned_cols=47 Identities=21% Similarity=0.446 Sum_probs=32.7
Q ss_pred CCCCcccccccC-CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCC
Q 002177 192 GGQICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACR 243 (956)
Q Consensus 192 ~~~~CHQCrqkt-~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Cr 243 (956)
....| .|++.. .+.++.|-.|.+ -|=..|+.--..... -.|.||.|+
T Consensus 27 d~vrC-iC~~~~~~~~mi~Cd~C~~-w~H~~C~~~~~~~~p---~~w~C~~C~ 74 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGYMICCDKCSV-WQHIDCMGIDRQHIP---DTYLCERCQ 74 (98)
T ss_dssp CBCCC-TTSCCSCSSCEEEBTTTCB-EEETTTTTCCTTSCC---SSBCCTTTS
T ss_pred CCEEe-ECCCccCCCcEEEcCCCCC-cCcCcCCCCCccCCC---CCEECCCCc
Confidence 44678 588776 457999999994 777788754322221 169999996
No 114
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=69.15 E-value=2 Score=45.47 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=36.4
Q ss_pred hCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHH
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVR 871 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~r 871 (956)
+.|..-++.=..||.|+||+|.||..+|...- -..+.+++|....+-+.
T Consensus 80 ~~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p~~~~~~~~ 128 (337)
T 1y3t_A 80 LTLDGERYLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMKGNVAHLYS 128 (337)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECSTT-EEEEEEEETTSSTHHHH
T ss_pred EEECCEEEEECCCCEEEECCCCcEEEEECCCC-eEEEEEECCCCHHHHHH
Confidence 34456677788999999999999999999762 33455677777666443
No 115
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=68.74 E-value=2.3 Score=40.41 Aligned_cols=35 Identities=23% Similarity=0.297 Sum_probs=28.3
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeec
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (956)
+..=+++=+.||++|||+|.||..+|...+.++.+
T Consensus 90 ~~g~~~~l~~GD~i~~p~g~~h~~~~~~~~~~l~v 124 (133)
T 2pyt_A 90 HEGETMIAKAGDVMFIPKGSSIEFGTPTSVRFLYV 124 (133)
T ss_dssp ETTEEEEEETTCEEEECTTCEEEEEEEEEEEEEEE
T ss_pred ECCEEEEECCCcEEEECCCCEEEEEeCCCEEEEEE
Confidence 34556677899999999999999999877766654
No 116
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=68.42 E-value=3.4 Score=33.84 Aligned_cols=46 Identities=22% Similarity=0.616 Sum_probs=29.9
Q ss_pred CCcccccc-c--CCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 194 QICHQCRR-N--DRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 194 ~~CHQCrq-k--t~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.+|--|.. . .....+.=..|+ -.||..||..|+.. ....||.||..
T Consensus 4 ~~C~IC~~~~~~~~~~~~~~~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~~ 52 (65)
T 1g25_A 4 QGCPRCKTTKYRNPSLKLMVNVCG-HTLCESCVDLLFVR-----GAGNCPECGTP 52 (65)
T ss_dssp TCCSTTTTHHHHCSSCCEEECTTC-CCEEHHHHHHHHHT-----TSSSCTTTCCC
T ss_pred CcCCcCCCCccCCCccCeecCCCC-CHhHHHHHHHHHHc-----CCCcCCCCCCc
Confidence 46777776 2 222211225788 48999999999753 14579999874
No 117
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=68.05 E-value=2.4 Score=41.05 Aligned_cols=50 Identities=20% Similarity=0.539 Sum_probs=37.3
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchh-----hhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLE-----ELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~e-----dv~~~CP~Crg 244 (956)
....|..|... +.++-|..|.+ .||..||..-.+.-... +-.|.|+.|+-
T Consensus 56 ~~~~C~vC~dG--G~LlcCd~Cpr-~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 56 MDEQCRWCAEG--GNLICCDFCHN-AFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp CBSSCTTTCCC--SEEEECSSSSC-EEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCcCeecCCC--CeeEecCCCch-hhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45679999854 45899999994 99999999876532222 33599999954
No 118
>2wfp_A Mannose-6-phosphate isomerase; APO-structure, metal-binding; 1.67A {Salmonella typhimurium} PDB: 3h1w_A 3h1m_A 3h1y_A*
Probab=67.88 E-value=1.8 Score=48.65 Aligned_cols=17 Identities=35% Similarity=0.487 Sum_probs=15.1
Q ss_pred eecCceEEecCCCcccc
Q 002177 831 QHLGEAVFIPAGCPFQV 847 (956)
Q Consensus 831 Q~lGEAVFIPAGCPHQV 847 (956)
=++|||+|||||.||=.
T Consensus 244 l~pGd~~fipAG~~HAy 260 (394)
T 2wfp_A 244 LNPGEAMFLFAETPHAY 260 (394)
T ss_dssp ECTTCEEEECTTCCEEE
T ss_pred CCCCCEEEcCCCCceEc
Confidence 37899999999999973
No 119
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=67.63 E-value=4.7 Score=33.79 Aligned_cols=50 Identities=22% Similarity=0.636 Sum_probs=37.8
Q ss_pred CcCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 190 DTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 190 ~~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
......|..|++. +.++.|-.|.+ .|=..||.---.++. .-.|.||.|..
T Consensus 8 ~~~~~~C~vC~~~--g~ll~CD~C~~-~fH~~Cl~p~l~~~p--~g~W~C~~C~~ 57 (61)
T 2l5u_A 8 TDHQDYCEVCQQG--GEIILCDTCPR-AYHMVCLDPDMEKAP--EGKWSCPHCEK 57 (61)
T ss_dssp SCCCSSCTTTSCC--SSEEECSSSSC-EEEHHHHCTTCCSCC--CSSCCCTTGGG
T ss_pred CCCCCCCccCCCC--CcEEECCCCCh-hhhhhccCCCCCCCC--CCceECccccc
Confidence 3567789999874 57999999995 899999976433322 24799999963
No 120
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=67.36 E-value=1.9 Score=47.11 Aligned_cols=70 Identities=10% Similarity=0.025 Sum_probs=50.7
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCccc-----eEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHH
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVEP-----WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAE 874 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVEp-----Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLte 874 (956)
.|+-.++.||+-.-. =++-|.. -++.=..||.|+||+|.||..+|...-. ..+-+++|....+-|+-..
T Consensus 67 ~H~~~~E~~~Vl~G~-----~~~~v~~~~g~~~~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~~l~ 140 (350)
T 1juh_A 67 IHQKHYENFYCNKGS-----FQLWAQSGNETQQTRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFYYLG 140 (350)
T ss_dssp ECSSCEEEEEEEESE-----EEEEEEETTSCCEEEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTHHHHHHS
T ss_pred cCCCceEEEEEEEEE-----EEEEECCcCCceEEEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHHHhc
Confidence 466566777764432 1344555 7788899999999999999999987654 6677888988766655443
Q ss_pred H
Q 002177 875 E 875 (956)
Q Consensus 875 E 875 (956)
+
T Consensus 141 ~ 141 (350)
T 1juh_A 141 T 141 (350)
T ss_dssp E
T ss_pred c
Confidence 3
No 121
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=67.31 E-value=2 Score=45.17 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=31.9
Q ss_pred CCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002177 805 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 805 DQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
++-+|+-.- +-++.|..-++.=..||+|+||||+||+.+|...
T Consensus 204 ~E~~yVl~G-----~~~~~i~~~~~~l~~GD~i~i~~~~~H~~~n~~~ 246 (274)
T 1sef_A 204 EHGAYLISG-----QGMYNLDNEWYPVEKGDYIFMSAYVPQAAYAVGR 246 (274)
T ss_dssp CEEEEEEEC-----EEEEEETTEEEEEETTCEEEECTTCCEEEEEECS
T ss_pred eEEEEEEeC-----EEEEEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 455555433 1245556667888999999999999999999855
No 122
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=66.97 E-value=3.8 Score=46.18 Aligned_cols=50 Identities=20% Similarity=0.531 Sum_probs=40.3
Q ss_pred CCCCcccccccCCCCeEEcC--cCCCccccHhHHhhhcCCCchhhh----hhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCV--KCDKRGYCDSCISTWYSDIPLEEL----EKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~--~C~r~~FC~~CL~~rY~e~~~edv----~~~CP~Crg 244 (956)
....|.+|-... .++.|. +|.+ .||..||....+.-..+.+ .|.|=.|.-
T Consensus 92 ~~~yCr~C~~Gg--~l~~Cdn~~C~r-~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 92 YQSYCSICCSGE--TLLICGNPDCTR-CYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SBCSCTTTCCCS--SCEECCSTTCCC-EECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CcccceEcCCCC--eEEEeCCCCCCc-chHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 566899999754 599999 7994 8999999999987655554 599988874
No 123
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.74 E-value=2.1 Score=34.81 Aligned_cols=45 Identities=24% Similarity=0.486 Sum_probs=32.6
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPAC 242 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~C 242 (956)
....|--|...-...++. .|+ -.||..||..|... ......||.|
T Consensus 19 ~~~~C~IC~~~~~~p~~~--~Cg-H~fC~~Ci~~~~~~---~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVTI--DCG-HNFCLKCITQIGET---SCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEEC--TTS-SEECHHHHHHHHHH---CSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEEe--CCC-CcchHHHHHHHHHc---CCCCCcCcCC
Confidence 567899998766555443 799 47999999999852 1234579988
No 124
>1pmi_A PMI, phosphomannose isomerase; aldose-ketose isomerase; 1.70A {Candida albicans} SCOP: b.82.1.3
Probab=65.52 E-value=2.1 Score=48.82 Aligned_cols=16 Identities=38% Similarity=0.557 Sum_probs=14.7
Q ss_pred eecCceEEecCCCccc
Q 002177 831 QHLGEAVFIPAGCPFQ 846 (956)
Q Consensus 831 Q~lGEAVFIPAGCPHQ 846 (956)
=++|||+|||||.||=
T Consensus 270 L~pGea~flpAg~~HA 285 (440)
T 1pmi_A 270 LNKGEAMFLQAKDPHA 285 (440)
T ss_dssp ECTTCEEEECTTCCEE
T ss_pred cCCCCEEecCCCCccc
Confidence 5689999999999997
No 125
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=65.03 E-value=2.1 Score=45.79 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=23.0
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
|.+..=.++=+.||++|||+||||+..|.-
T Consensus 220 y~l~~~~~~V~~GD~i~~~~~~~h~~~n~G 249 (266)
T 4e2q_A 220 YRLGDNWYPVQAGDVIWMAPFVPQWYAALG 249 (266)
T ss_dssp EEETTEEEEEETTCEEEECTTCCEEEEEES
T ss_pred EEECCEEEEecCCCEEEECCCCcEEEEeCC
Confidence 334444455568999999999999999863
No 126
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=64.81 E-value=3.3 Score=41.49 Aligned_cols=30 Identities=23% Similarity=0.177 Sum_probs=25.4
Q ss_pred CccceEEEeecCceEEecCCCccccccccc
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
-|..=+|.=..||.++||||.||..+|.-.
T Consensus 124 tl~g~~~~L~~Gds~~iP~g~~H~~~N~~d 153 (166)
T 2vpv_A 124 TVCKNKFLSVKGSTFQIPAFNEYAIANRGN 153 (166)
T ss_dssp EETTEEEEEETTCEEEECTTCEEEEEECSS
T ss_pred EECCEEEEEcCCCEEEECCCCCEEEEECCC
Confidence 344557778899999999999999999765
No 127
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=64.74 E-value=4 Score=47.29 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=34.5
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc--cceeeccccCC
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS--TVQLGLDFLFP 863 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS--CIKVAlDFVSP 863 (956)
.+-..+.++-.+||..|||.|.+|||+++-. +|.++.-+-.+
T Consensus 223 ~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~ 266 (489)
T 4diq_A 223 LGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQR 266 (489)
T ss_dssp CCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTT
T ss_pred ccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCc
Confidence 3556789999999999999999999999954 67777666544
No 128
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=64.27 E-value=3.5 Score=40.47 Aligned_cols=50 Identities=22% Similarity=0.573 Sum_probs=37.6
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCch-----hhhhhcCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPL-----EELEKVCPACR 243 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~-----edv~~~CP~Cr 243 (956)
.....|-.|.... .++-|..|.+ .||..||..--+.-.. .+-.|.||.|+
T Consensus 61 g~~d~C~vC~~GG--~LlcCD~Cpr-~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~ 115 (142)
T 2lbm_A 61 GMDEQCRWCAEGG--NLICCDFCHN-AFCKKCILRNLGRKELSTIMDENNQWYCYICH 115 (142)
T ss_dssp SCBCSCSSSCCCS--SEEECSSSCC-EEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTC
T ss_pred CCCCeecccCCCC--cEEeCCCCCC-eeeHhhcCCCCChhhhhhcccCCCCCEeeccc
Confidence 3567899998655 4999999995 9999999876653112 23369999996
No 129
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=64.23 E-value=4.4 Score=36.90 Aligned_cols=46 Identities=24% Similarity=0.687 Sum_probs=31.8
Q ss_pred CCCCcccccccCC-----CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~-----~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|...-. ........|+ -.||..||..|.. ....||.||.
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~------~~~~CP~Cr~ 121 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLK------NANTCPTCRK 121 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTS-BEEEHHHHHHHHH------HCSBCTTTCC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCC-ChhhHHHHHHHHH------cCCCCCCCCC
Confidence 4556777775422 2233555788 5899999999864 2468999996
No 130
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.16 E-value=7 Score=33.06 Aligned_cols=42 Identities=26% Similarity=0.734 Sum_probs=30.9
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|--|.......+. .-|+...||..|+.+ .+.||.||.
T Consensus 13 ~~~~~C~IC~~~~~~~v~--~pCgH~~~C~~C~~~----------~~~CP~CR~ 54 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWVL--LPCRHTCLCDGCVKY----------FQQCPMCRQ 54 (68)
T ss_dssp CCSSCCSSSSSSCCCCEE--TTTTBCCSCTTHHHH----------CSSCTTTCC
T ss_pred CCCCCCCCcCcCCCCEEE--ECCCChhhhHHHHhc----------CCCCCCCCc
Confidence 456789999887765332 357754599999983 268999997
No 131
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=63.82 E-value=2.3 Score=46.41 Aligned_cols=55 Identities=18% Similarity=0.326 Sum_probs=34.4
Q ss_pred ceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCc
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (956)
.-++.=..||+++||+|+||+++|..+--=+.+-++.|..... +.+.+-++.+|.
T Consensus 300 ~~~~~l~~GD~~~ip~~~~H~~~n~~~~~~~~l~v~~~~~~~d-~~~~~~l~~~~~ 354 (385)
T 1j58_A 300 ARTFNYQAGDVGYVPFAMGHYVENIGDEPLVFLEIFKDDHYAD-VSLNQWLAMLPE 354 (385)
T ss_dssp EEEEEEESSCEEEECTTCBEEEEECSSSCEEEEEEESSSSCCC-EEHHHHHHTSCH
T ss_pred EEEEEEcCCCEEEECCCCeEEEEECCCCCEEEEEEECCCCccc-cCHHHHHHhCCH
Confidence 3466677999999999999999998653223344445432211 123455566654
No 132
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=63.76 E-value=3.3 Score=45.49 Aligned_cols=40 Identities=18% Similarity=-0.020 Sum_probs=30.7
Q ss_pred ccceEEEeecCceEEecCCCccccccccccceeeccccCC
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (956)
|.+-++.=..||+|+||+|.+|+.+|...---+-++|..|
T Consensus 136 v~g~~~~l~~GD~~~iP~g~~H~~~n~~~~~~~~l~v~d~ 175 (354)
T 2d40_A 136 VDGERTPMNEGDFILTPQWRWHDHGNPGDEPVIWLDGLDL 175 (354)
T ss_dssp ETTEEEECCTTCEEEECTTSCEEEECCSSSCEEEEEEECH
T ss_pred ECCEEEEEcCCCEEEECCCCcEEeEeCCCCCEEEEEEECc
Confidence 4555788889999999999999999986533344666654
No 133
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=63.70 E-value=4.1 Score=46.40 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=27.8
Q ss_pred HhCccceEEEeecCceEEecCCCcccccccc
Q 002177 821 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 821 EyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
++|...+.++=.+||+.|||+|.+|+|+.+.
T Consensus 193 ~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~ 223 (442)
T 2xdv_A 193 RIGRPVHEFMLKPGDLLYFPRGTIHQADTPA 223 (442)
T ss_dssp TSCSCSEEEEECTTCEEEECTTCEEEEECCS
T ss_pred hcCCcceEEEECCCcEEEECCCceEEEEecC
Confidence 3566778999999999999999999999986
No 134
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=63.59 E-value=3 Score=38.08 Aligned_cols=46 Identities=24% Similarity=0.584 Sum_probs=33.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-...++ ..|+ -.||..||..|.... ...||.||..
T Consensus 22 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~~-----~~~CP~Cr~~ 67 (116)
T 1rmd_A 22 KSISCQICEHILADPVE--TSCK-HLFCRICILRCLKVM-----GSYCPSCRYP 67 (116)
T ss_dssp HHTBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHHHHT-----CSBCTTTCCB
T ss_pred CCCCCCCCCcHhcCcEE--cCCC-CcccHHHHHHHHhHC-----cCcCCCCCCC
Confidence 45678889766555444 5799 589999999997531 3579999873
No 135
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=62.94 E-value=5.9 Score=34.43 Aligned_cols=42 Identities=24% Similarity=0.739 Sum_probs=30.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|.....+.+. ..|+...||..|+..+ +.||.||..
T Consensus 17 ~~~~C~IC~~~~~~~v~--~pCgH~~~C~~C~~~~----------~~CP~Cr~~ 58 (79)
T 2yho_A 17 EAMLCMVCCEEEINSTF--CPCGHTVCCESCAAQL----------QSCPVCRSR 58 (79)
T ss_dssp HHTBCTTTSSSBCCEEE--ETTCBCCBCHHHHTTC----------SBCTTTCCB
T ss_pred CCCEeEEeCcccCcEEE--ECCCCHHHHHHHHHhc----------CcCCCCCch
Confidence 44578888877665433 3688655999999865 389999973
No 136
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=62.80 E-value=2.5 Score=38.30 Aligned_cols=37 Identities=22% Similarity=0.504 Sum_probs=25.4
Q ss_pred eEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 207 VVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 207 ~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
++.-..|+ -.||..||..|... ........||.||..
T Consensus 55 ~~~~~~C~-H~Fh~~Ci~~wl~~-~~~~~~~~CP~CR~~ 91 (114)
T 1v87_A 55 VGRLTKCS-HAFHLLCLLAMYCN-GNKDGSLQCPSCKTI 91 (114)
T ss_dssp CEEESSSC-CEECHHHHHHHHHH-TCCSSCCBCTTTCCB
T ss_pred ceecCCCC-CcccHHHHHHHHHc-ccCCCCCcCCCCCCc
Confidence 44456788 48999999999721 001234689999974
No 137
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=62.18 E-value=6 Score=35.99 Aligned_cols=49 Identities=24% Similarity=0.603 Sum_probs=37.0
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|..|++.. .++.|-.|.+ .|=..||..-..++. +-.|.||.|+.
T Consensus 23 ~n~~~C~vC~~~g--~LL~CD~C~~-~fH~~Cl~PpL~~~P--~g~W~C~~C~~ 71 (88)
T 1fp0_A 23 DSATICRVCQKPG--DLVMCNQCEF-CFHLDCHLPALQDVP--GEEWSCSLCHV 71 (88)
T ss_dssp SSSSCCSSSCSSS--CCEECTTSSC-EECTTSSSTTCCCCC--SSSCCCCSCCC
T ss_pred CCCCcCcCcCCCC--CEEECCCCCC-ceecccCCCCCCCCc--CCCcCCccccC
Confidence 4677999999764 5999999995 788888855444332 23799999975
No 138
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=61.42 E-value=3.4 Score=41.17 Aligned_cols=48 Identities=25% Similarity=0.630 Sum_probs=35.3
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
+...|..|++. +.++.|-.|. ..|-..|+..-..... .-.|.||.|+.
T Consensus 3 ~~~~C~~C~~~--g~ll~Cd~C~-~~~H~~C~~p~l~~~p--~~~W~C~~C~~ 50 (184)
T 3o36_A 3 NEDWCAVCQNG--GELLCCEKCP-KVFHLSCHVPTLTNFP--SGEWICTFCRD 50 (184)
T ss_dssp SCSSCTTTCCC--SSCEECSSSS-CEECTTTSSSCCSSCC--SSCCCCTTTSC
T ss_pred CCCccccCCCC--CeeeecCCCC-cccCccccCCCCCCCC--CCCEECccccC
Confidence 34679999865 4599999999 4899999865443322 23699999986
No 139
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=61.03 E-value=2.8 Score=44.44 Aligned_cols=43 Identities=21% Similarity=0.386 Sum_probs=31.0
Q ss_pred CCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCCccccccccc
Q 002177 805 GEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 805 DQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
++.+|+-.-. -++.|..=++.=..||+++||+|.||+++|.-+
T Consensus 91 eE~~~Vl~G~-----l~v~v~g~~~~L~~GD~i~ip~~~~H~~~N~g~ 133 (278)
T 1sq4_A 91 EAVLFVVEGE-----LSLTLQGQVHAMQPGGYAFIPPGADYKVRNTTG 133 (278)
T ss_dssp EEEEEEEESC-----EEEEESSCEEEECTTEEEEECTTCCEEEECCSS
T ss_pred eEEEEEEeCE-----EEEEECCEEEEECCCCEEEECCCCcEEEEECCC
Confidence 5556654331 134445567788899999999999999999843
No 140
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=60.24 E-value=2.8 Score=38.57 Aligned_cols=45 Identities=27% Similarity=0.533 Sum_probs=32.3
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|...-...++ ..|+ -.||..||..|... ....||.||.
T Consensus 17 ~~~~C~IC~~~~~~p~~--~~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~ 61 (118)
T 3hct_A 17 SKYECPICLMALREAVQ--TPCG-HRFCKACIIKSIRD-----AGHKCPVDNE 61 (118)
T ss_dssp GGGBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHHHH-----HCSBCTTTCC
T ss_pred CCCCCCcCChhhcCeEE--CCcC-ChhhHHHHHHHHhh-----CCCCCCCCCC
Confidence 45678888866655443 3699 48999999998742 1238999985
No 141
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.49 E-value=6.4 Score=33.43 Aligned_cols=42 Identities=24% Similarity=0.612 Sum_probs=29.3
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|--|...-...++ ..|+...||..|+.+. ..||.||..
T Consensus 24 ~~~~C~IC~~~~~~~~~--~pCgH~~~C~~C~~~~----------~~CP~Cr~~ 65 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVF--VPCGHLVTCKQCAEAV----------DKCPMCYTV 65 (75)
T ss_dssp HHHSCSSSCSSCCCBCC--SSSCCCCBCHHHHHHC----------SBCTTTCCB
T ss_pred CCCCCCcCCCCCCCEEE--ecCCCHHHHHHHhhCC----------CCCccCCce
Confidence 45578889876654332 4688534999999532 679999963
No 142
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=59.29 E-value=8.1 Score=35.23 Aligned_cols=53 Identities=21% Similarity=0.478 Sum_probs=42.5
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhh-hcCCCc--h-------hhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCIST-WYSDIP--L-------EELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~-rY~e~~--~-------edv~~~CP~Crg 244 (956)
+.-.+|--|.+-+.+.+..|+.|+| .|=..||++ .|..-. . -++-|.||.|-.
T Consensus 13 ~~D~~C~VC~~~t~~~l~pCRvC~R-vfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 13 VNDEMCDVCEVWTAESLFPCRVCTR-VFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CCSCCCTTTCCCCSSCCSSCSSSSS-CCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCCcccCccccccccceeccccccc-cccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 4677999999999999999999995 899999999 587522 1 133599999954
No 143
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.19 E-value=6.5 Score=34.67 Aligned_cols=48 Identities=25% Similarity=0.646 Sum_probs=31.2
Q ss_pred CcccccccC-CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 195 ICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 195 ~CHQCrqkt-~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.|..|.+.. .+.++.|-.|.+ .|=..||.---..+. +...|.||.|..
T Consensus 28 ~C~vC~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~P-~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCDECNV-AYHIYCLNPPLDKVP-EEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCCCSTTEEECSSSCC-EEETTSSSSCCSSCC-CSSCCCCTTTCC
T ss_pred CCcCcCCcCCCCCEEEcCCCCc-cccccccCCCccCCC-CCCCcCCcCccC
Confidence 566777664 456888888884 677777753322222 223799999974
No 144
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=59.07 E-value=4.8 Score=35.15 Aligned_cols=48 Identities=25% Similarity=0.572 Sum_probs=31.5
Q ss_pred CCCCcccccccCC--C-CeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 192 GGQICHQCRRNDR--E-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 192 ~~~~CHQCrqkt~--~-~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
...+|-=|...-. + ....| .|+ -.||..||.+...+ ....||.||..-
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~-~CG-H~fC~~Cl~~~~~~-----~~~~CP~CR~~~ 60 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPC-TCG-YQICRFCWHRIRTD-----ENGLCPACRKPY 60 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSS-TTS-CCCCHHHHHHHTTS-----SCSBCTTTCCBC
T ss_pred cCCcCCccCccCcccccccccc-CCC-CCcCHHHHHHHHhc-----CCCCCCCCCCcc
Confidence 4556777776331 1 12234 588 58999999987643 247899999753
No 145
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=58.78 E-value=4.3 Score=45.34 Aligned_cols=29 Identities=17% Similarity=0.158 Sum_probs=24.9
Q ss_pred ccceEEEeecCceEEecCCCccccccccc
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
|.+=+|.=..||+||||+|+.|++.|--+
T Consensus 139 vdG~~~~~~~GD~v~iP~g~~H~~~N~gd 167 (368)
T 3nw4_A 139 VNGDPVRMSRGDLLLTPGWCFHGHMNDTD 167 (368)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEECSS
T ss_pred ECCEEEEEeCCCEEEECCCCcEEeEeCCC
Confidence 45667888999999999999999999643
No 146
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=58.74 E-value=4.2 Score=45.77 Aligned_cols=29 Identities=21% Similarity=0.035 Sum_probs=25.8
Q ss_pred CccceEEEeecCceEEecCCCcccccccc
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
-|.+-+|.-..||+||||+|.+||+.|.-
T Consensus 328 ~V~ge~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 328 IVGGKRFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEECC
T ss_pred EECCEEEEEeCCCEEEECCCCeEEeEeCC
Confidence 35677899999999999999999999974
No 147
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.64 E-value=2.1 Score=35.20 Aligned_cols=49 Identities=27% Similarity=0.709 Sum_probs=35.8
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|..|++. +.++.|-.|. ..|=..||..-...+. .-.|.||.|..
T Consensus 7 ~~~~~C~vC~~~--g~ll~Cd~C~-~~~H~~Cl~ppl~~~p--~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS--GQLLMCDTCS-RVYHLDCLDPPLKTIP--KGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS--SCCEECSSSS-CEECSSSSSSCCCSCC--CSSCCCHHHHC
T ss_pred CCCCCCccCCCC--CeEEEcCCCC-cceECccCCCCcCCCC--CCceEChhhhC
Confidence 467789999975 4699999999 4788888864333322 23799999864
No 148
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=58.34 E-value=4.5 Score=32.60 Aligned_cols=42 Identities=21% Similarity=0.619 Sum_probs=29.2
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
...+|--|...-...++ ..|+ -.||..||..+ ...||.||..
T Consensus 5 ~~~~C~IC~~~~~~p~~--l~Cg-H~fC~~Ci~~~---------~~~CP~Cr~~ 46 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKL--LPCL-HTLCSGCLEAS---------GMQCPICQAP 46 (56)
T ss_dssp CCSSCSSSCSSCBCCSC--STTS-CCSBTTTCSSS---------SSSCSSCCSS
T ss_pred cCCCceEeCCccCCeEE--cCCC-CcccHHHHccC---------CCCCCcCCcE
Confidence 45678888765554322 4588 48999999872 4579999864
No 149
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=58.01 E-value=4.6 Score=39.92 Aligned_cols=27 Identities=30% Similarity=0.474 Sum_probs=23.2
Q ss_pred ceEEEeecCceEEecCCCccccccccc
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
.-++.=..||+++||+|.||..+|.-.
T Consensus 82 ~~~~~l~~GDv~~~P~g~~H~~~N~g~ 108 (178)
T 1dgw_A 82 RDTYKLDQGDAIKIQAGTPFYLINPDN 108 (178)
T ss_dssp EEEEEEETTEEEEECTTCCEEEEECCS
T ss_pred cEEEEECCCCEEEECCCCeEEEEeCCC
Confidence 446677889999999999999999864
No 150
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.91 E-value=15 Score=32.06 Aligned_cols=48 Identities=21% Similarity=0.509 Sum_probs=36.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.-..|.-|+.--. .-..|..|+ .+|=..||.+|+... ..-.||.||..
T Consensus 14 ~i~~C~IC~~~i~-~g~~C~~C~-h~fH~~Ci~kWl~~~----~~~~CP~Cr~~ 61 (74)
T 2ct0_A 14 AVKICNICHSLLI-QGQSCETCG-IRMHLPCVAKYFQSN----AEPRCPHCNDY 61 (74)
T ss_dssp SSCBCSSSCCBCS-SSEECSSSC-CEECHHHHHHHSTTC----SSCCCTTTCSC
T ss_pred CCCcCcchhhHcc-cCCccCCCC-chhhHHHHHHHHHhc----CCCCCCCCcCc
Confidence 5578888886654 356899999 589999999999642 12579999864
No 151
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=56.26 E-value=5.6 Score=36.22 Aligned_cols=47 Identities=23% Similarity=0.704 Sum_probs=31.9
Q ss_pred CCCCcccccccCC-----CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDR-----ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~-----~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|-=|...-. +..+.-..|+ -.||..||..|.... ..||.||..
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~Cg-H~fc~~Ci~~~~~~~------~~CP~Cr~~ 57 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECG-HVFCSQCLRDSLKNA------NTCPTCRKK 57 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTC-CEEEHHHHHHHHTTC------SBCTTTCCB
T ss_pred CCCCCcccChhhhCccccccCeEecCCC-ChhhHHHHHHHHHhC------CCCCCCCCc
Confidence 3456777765432 2233555788 489999999998652 389998863
No 152
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=56.18 E-value=8.9 Score=38.99 Aligned_cols=50 Identities=20% Similarity=0.549 Sum_probs=36.7
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.....|..|++.. .++.|-.|. ..|-..||..-..... .-.|.||.|+..
T Consensus 5 ~~~~~C~~C~~~g--~ll~Cd~C~-~~~H~~Cl~p~l~~~p--~~~W~C~~C~~~ 54 (207)
T 3u5n_A 5 PNEDWCAVCQNGG--DLLCCEKCP-KVFHLTCHVPTLLSFP--SGDWICTFCRDI 54 (207)
T ss_dssp SSCSSBTTTCCCE--EEEECSSSS-CEECTTTSSSCCSSCC--SSCCCCTTTSCS
T ss_pred CCCCCCCCCCCCC--ceEEcCCCC-CccCCccCCCCCCCCC--CCCEEeCceeCc
Confidence 4567799998654 599999999 4899999865433322 236999999863
No 153
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=56.04 E-value=7.8 Score=39.05 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=21.5
Q ss_pred EEEeecCceEEecCCCccccccccc
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
.+.=..||.|+||||.||...+-..
T Consensus 123 ~~~l~~GDli~IP~g~~H~~~~~~~ 147 (179)
T 1zrr_A 123 QVLCEKNDLISVPAHTPHWFDMGSE 147 (179)
T ss_dssp EEECCCSCEEEECTTCCBCCCCSSC
T ss_pred EEEECCCCEEEECCCCeEeeecCCC
Confidence 4666899999999999999888665
No 154
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=55.80 E-value=8.9 Score=33.16 Aligned_cols=36 Identities=22% Similarity=0.533 Sum_probs=27.8
Q ss_pred CcCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCC
Q 002177 190 DTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (956)
Q Consensus 190 ~~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~ 230 (956)
+.....|..|+++.--....| .|+ +.||. .-||++.
T Consensus 12 ~~~~~rC~~C~kkvgl~~f~C-rCg-~~FC~---~HR~~e~ 47 (64)
T 1wg2_A 12 VRPNNRCFSCNKKVGVMGFKC-KCG-STFCG---SHRYPEK 47 (64)
T ss_dssp SCCSCSCTTTCCCCTTSCEEC-TTS-CEECS---SSCSSTT
T ss_pred CCcCCcChhhCCcccccCeEe-ecC-CEecc---cCCCccc
Confidence 357789999999854346899 799 58986 6789874
No 155
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=55.49 E-value=2.4 Score=40.80 Aligned_cols=45 Identities=27% Similarity=0.659 Sum_probs=33.0
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|..--...++ +.|+ -.||..||..|... -...||.||.
T Consensus 30 ~~~~C~IC~~~~~~pv~--~~Cg-H~FC~~Ci~~~~~~-----~~~~CP~Cr~ 74 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQ--AQCG-HRYCSFCLASILSS-----GPQNCAACVH 74 (141)
T ss_dssp GGGBCTTTCSBCSSEEE--CTTS-CEEEHHHHHHHGGG-----SCEECHHHHH
T ss_pred cCcCCCCCChhhcCcEE--CCCC-CccCHHHHHHHHhc-----CCCCCCCCCC
Confidence 55689999876665544 4899 48999999999742 1247888775
No 156
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=55.19 E-value=8.6 Score=34.84 Aligned_cols=45 Identities=13% Similarity=0.025 Sum_probs=34.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
...+|-=|..--.+.++ ..|+...||..||..|..+ ...||+|+.
T Consensus 21 ~~~~CpI~~~~m~dPV~--~~cG~htf~r~cI~~~l~~------~~~cP~~~~ 65 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVV--LPSSRVTVDRSTIARHLLS------DQTDPFNRS 65 (98)
T ss_dssp TTTBCTTTCSBCSSEEE--CTTTCCEEEHHHHHHHTTT------SCBCTTTCS
T ss_pred HhcCCcCccccccCCeE--CCCCCeEECHHHHHHHHHh------CCCCCCCCC
Confidence 56788888877666665 4687458999999999874 358999985
No 157
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=54.85 E-value=4.8 Score=33.48 Aligned_cols=47 Identities=21% Similarity=0.423 Sum_probs=33.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|.....+.++.-.-|+...||..|+.++.. ..+.||.||.
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~------~~~~CPiCR~ 53 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKK------RNKPCPVCRQ 53 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHH------TTCCCTTTCC
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHH------cCCcCCCcCc
Confidence 4567888987777655433457754599999988763 2468999997
No 158
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=54.34 E-value=3.4 Score=44.50 Aligned_cols=55 Identities=11% Similarity=0.112 Sum_probs=35.1
Q ss_pred eEEEeecCceEEecCCCccccccccccceeeccccCCCCHHH--HHHHHHHHhcCCc
Q 002177 827 WSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGE--AVRLAEEIRCLPN 881 (956)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~e--C~rLteEfR~Lp~ 881 (956)
-++.=..||+++||+|.||..+|..+--=+.+.+..|-+..+ -+.+++=|+.+|.
T Consensus 96 ~~~~l~~GD~~~ip~g~~H~~~n~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~p~ 152 (361)
T 2vqa_A 96 EIADVDKGGLWYFPRGWGHSIEGIGPDTAKFLLVFNDGTFSEGATFSVTDWLSHTPI 152 (361)
T ss_dssp EEEEEETTEEEEECTTCEEEEEECSSSCEEEEEEESSTTCCTTSSEEHHHHHHTSCH
T ss_pred EEEEEcCCCEEEECCCCeEEEEeCCCCCEEEEEEECCCCccccceecHhHHHHhCCH
Confidence 456777899999999999999998631112234444443322 2345566666664
No 159
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=54.31 E-value=4.3 Score=42.05 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=25.0
Q ss_pred CccceEEEeecCceEEecCCCcccccccccc
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQST 853 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSC 853 (956)
.|..=++.=..||+++||||.||+++|...+
T Consensus 82 ~~~~~~~~l~~Gd~~~~p~~~~H~~~n~~~~ 112 (246)
T 1sfn_A 82 AVGGETRTLREYDYVYLPAGEKHMLTAKTDA 112 (246)
T ss_dssp ECSSCEEEECTTEEEEECTTCCCEEEEEEEE
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCCE
Confidence 3445566778899999999999999998544
No 160
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=54.25 E-value=5.5 Score=46.03 Aligned_cols=34 Identities=21% Similarity=0.426 Sum_probs=26.3
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
..||+|+||||.||-..|.-+--=|++-++.+-|
T Consensus 118 ~~GDvi~iPaG~~h~~~N~g~~~l~~v~~~d~~n 151 (493)
T 2d5f_A 118 NEGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSN 151 (493)
T ss_dssp ETTEEEEECTTCCEEEEECSSSCEEEEEEECTTC
T ss_pred cCCCEEEECCCCcEEEEeCCCCCEEEEEEecCcC
Confidence 6799999999999999999875555554545443
No 161
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=52.58 E-value=12 Score=29.83 Aligned_cols=47 Identities=28% Similarity=0.804 Sum_probs=34.7
Q ss_pred CcccccccC-CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 195 ICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 195 ~CHQCrqkt-~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.|..|++.. .+.++.|-.|.+ .|=..||.--..++. +-.|.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~-~~H~~Cl~p~l~~~P--~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNK-AFHLFCLRPALYEVP--DGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCC-EECHHHHCTTCCSCC--SSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCCh-hhCcccCCCCcCCCC--CCcEECcCccc
Confidence 588898876 457999999995 788889864333322 23799999975
No 162
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=52.33 E-value=7.2 Score=36.20 Aligned_cols=50 Identities=24% Similarity=0.696 Sum_probs=36.3
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.-+.|+-|++.. .+.++.|..|.+ .|=..||..-..++.. -.|.||.|+.
T Consensus 60 ~C~~C~vC~~~~~~~~~ll~Cd~C~~-~yH~~Cl~p~l~~~P~--~~W~C~~C~~ 111 (112)
T 3v43_A 60 ECKTCSSCRDQGKNADNMLFCDSCDR-GFHMECCDPPLTRMPK--GMWICQICRP 111 (112)
T ss_dssp TTCCBTTTCCCCCTTCCCEECTTTCC-EECGGGCSSCCSSCCS--SCCCCTTTSC
T ss_pred cCCccccccCcCCCccceEEcCCCCC-eeecccCCCCCCCCCC--CCeECCCCCC
Confidence 344688888753 357999999994 8889999755554332 2799999974
No 163
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=51.67 E-value=6.4 Score=39.48 Aligned_cols=35 Identities=14% Similarity=0.024 Sum_probs=25.9
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCC
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFP 863 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSP 863 (956)
++.=..||+| ||+|.||+.+|.-.---..+-.++|
T Consensus 119 ~~~L~~GDsi-~~~g~~H~~~N~g~~~ar~l~V~~P 153 (172)
T 3es1_A 119 KRTVRQGGII-VQRGTNHLWRNTTDKPCRIAFILIE 153 (172)
T ss_dssp EEEECTTCEE-EECSCCBEEECCSSSCEEEEEEEEE
T ss_pred EEEECCCCEE-EeCCCcEEEEeCCCCCEEEEEEEcC
Confidence 4566899999 9999999999987654444444444
No 164
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=51.66 E-value=5.7 Score=45.51 Aligned_cols=34 Identities=18% Similarity=0.224 Sum_probs=26.2
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
+.||+|+||||.||-..|.-+--=+++-++++-|
T Consensus 132 ~~GDv~~iPaG~~H~~~N~g~~~l~~l~~~d~~n 165 (459)
T 2e9q_A 132 REGDLLVVPAGVSHWMYNRGQSDLVLIVFADTRN 165 (459)
T ss_dssp ETTEEEEECTTCCEEEEECSSSCEEEEEEEESSS
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEecCCC
Confidence 5799999999999999999865555554444443
No 165
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=51.20 E-value=4.9 Score=42.04 Aligned_cols=46 Identities=20% Similarity=0.277 Sum_probs=30.9
Q ss_pred CCCCcCCceecCHHHHHHHHHHhCcc-ceEEEeecCceEEecCCCcccccccc
Q 002177 800 THPLYGEVVYLNGDHKRKLKEEFGVE-PWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 800 ~hPIHDQ~fYLt~ehk~kLkEEyGVE-pWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
.|| ++|.+|+=.. .-||.|+ .=++.=..||.||||+|.||-+|+..
T Consensus 149 sHp-~EEiy~VLsG-----~~e~~v~~g~~~~l~pGd~v~ipsgv~Ha~rt~d 195 (217)
T 4b29_A 149 EHL-PEELYSVVSG-----RALFHLRNAPDLMLEPGQTRFHPANAPHAMTTLT 195 (217)
T ss_dssp ECS-SEEEEEEEEE-----CEEEEETTSCCEEECTTCEEEECTTCCEEEECCS
T ss_pred CCC-CceEEEEEeC-----CEEEEECCCCEEecCCCCEEEcCCCCceeEEECC
Confidence 466 4555554322 1246555 44566789999999999999999743
No 166
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=50.92 E-value=5.5 Score=44.90 Aligned_cols=46 Identities=33% Similarity=0.786 Sum_probs=33.2
Q ss_pred CCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 193 GQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 193 ~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
...|.-|...-.. .....|+ -.||..||..|... ....||.||...
T Consensus 332 ~~~C~ICle~~~~--pv~lpCG-H~FC~~Ci~~wl~~-----~~~~CP~CR~~i 377 (389)
T 2y1n_A 332 FQLCKICAENDKD--VKIEPCG-HLMCTSCLTSWQES-----EGQGCPFCRCEI 377 (389)
T ss_dssp SSBCTTTSSSBCC--EEEETTC-CEECHHHHHHHHHH-----TCSBCTTTCCBC
T ss_pred CCCCCccCcCCCC--eEEeCCC-ChhhHHHHHHHHhc-----CCCCCCCCCCcc
Confidence 3689999876654 3345788 47999999988641 245799999743
No 167
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=50.36 E-value=7.7 Score=42.86 Aligned_cols=42 Identities=26% Similarity=0.719 Sum_probs=32.8
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....|.-|...-...+.. .|+...||..|+..+ ..||.||..
T Consensus 294 ~~~~C~IC~~~~~~~v~l--pCgH~~fC~~C~~~~----------~~CP~CR~~ 335 (345)
T 3t6p_A 294 EERTCKVCMDKEVSVVFI--PCGHLVVCQECAPSL----------RKCPICRGI 335 (345)
T ss_dssp TTCBCTTTSSSBCCEEEE--TTCCEEECTTTGGGC----------SBCTTTCCB
T ss_pred CCCCCCccCCcCCceEEc--CCCChhHhHHHHhcC----------CcCCCCCCC
Confidence 567999999877654443 688644999999977 679999974
No 168
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=50.14 E-value=5.9 Score=41.00 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.2
Q ss_pred HhCccceEEEeecCceEEecCCCccccccccc
Q 002177 821 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 821 EyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
+|-+..=++.=..||.+|++|||||+.+|.-.
T Consensus 198 ~~~~~~~~~~l~~GD~~~~~~~~pH~~~n~g~ 229 (246)
T 1sfn_A 198 LYKLEENYYPVTAGDIIWMGAHCPQWYGALGR 229 (246)
T ss_dssp EEEETTEEEEEETTCEEEECTTCCEEEEEESS
T ss_pred EEEECCEEEEcCCCCEEEECCCCCEEEEcCCC
Confidence 45566666777899999999999999999653
No 169
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=50.12 E-value=5.9 Score=36.61 Aligned_cols=27 Identities=30% Similarity=0.741 Sum_probs=22.1
Q ss_pred CcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 211 VKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 211 ~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
..|+ -.|+..||..|... ...||.||.
T Consensus 71 ~~C~-H~FH~~Ci~~Wl~~------~~~CP~Cr~ 97 (106)
T 3dpl_R 71 GVCN-HAFHFHCISRWLKT------RQVCPLDNR 97 (106)
T ss_dssp ETTS-CEEEHHHHHHHHTT------CSBCSSSCS
T ss_pred cccC-cEECHHHHHHHHHc------CCcCcCCCC
Confidence 4688 58999999999764 357999986
No 170
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=49.31 E-value=11 Score=38.59 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=26.9
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCCC
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPE 864 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPE 864 (956)
++.=..||.|+||||.||...+-..--=+|+.|-+++
T Consensus 128 ~i~v~~GDlIiIPaG~~H~f~~~~~~~~~airlF~~~ 164 (191)
T 1vr3_A 128 RISMEKGDMITLPAGIYHRFTLDEKNYVKAMRLFVGE 164 (191)
T ss_dssp EEEEETTEEEEECTTCCEEEEECTTCCEEEEEEESSS
T ss_pred EEEECCCCEEEECcCCcCCcccCCCCCEEEEEEECCC
Confidence 6777899999999999999887655333455544444
No 171
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=48.59 E-value=6.2 Score=41.35 Aligned_cols=31 Identities=13% Similarity=0.103 Sum_probs=25.1
Q ss_pred hCccceEEEeecCceEEecCCCccccccccc
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
+.|..=++.=..||++++|||.||+++|.-+
T Consensus 97 ~~~~~~~~~L~~GD~~~~~~~~~H~~~N~~~ 127 (274)
T 1sef_A 97 VSDGQETHELEAGGYAYFTPEMKMYLANAQE 127 (274)
T ss_dssp EECSSCEEEEETTEEEEECTTSCCEEEESSS
T ss_pred EEECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 3344556777889999999999999999854
No 172
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=47.83 E-value=8.1 Score=40.03 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=24.8
Q ss_pred CccceEEEeecCceEEecCCCccccccccc
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
.|..=++.=..||+++||||.||+.+|.-+
T Consensus 95 ~~~~~~~~L~~Gd~~~~~~~~~H~~~N~~~ 124 (261)
T 1rc6_A 95 KAEGKTFALSEGGYLYCPPGSLMTFVNAQA 124 (261)
T ss_dssp EETTEEEEEETTEEEEECTTCCCEEEECSS
T ss_pred EECCEEEEECCCCEEEECCCCCEEEEeCCC
Confidence 344556777899999999999999999854
No 173
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=47.70 E-value=5.9 Score=42.39 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=20.7
Q ss_pred EEEeecCceEEecCCCcccccccc
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
++.=..||++++|||.+||++|-.
T Consensus 110 ~~~L~~Gds~y~p~~~~H~~~N~~ 133 (266)
T 4e2q_A 110 SKKLTVDSYAYLPPNFHHSLDCVE 133 (266)
T ss_dssp CEEECTTEEEEECTTCCCEEEESS
T ss_pred EEEEcCCCEEEECCCCCEEEEeCC
Confidence 455678999999999999999954
No 174
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=47.64 E-value=8.5 Score=34.59 Aligned_cols=37 Identities=22% Similarity=0.477 Sum_probs=29.6
Q ss_pred cCCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcC
Q 002177 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (956)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~ 228 (956)
.....|..|.++- ..+.-.|+.|+ ..||..|...+.+
T Consensus 7 ~~~~~C~~C~~~F~~~~RrHHCR~CG-~vfC~~Cs~~~~~ 45 (88)
T 1wfk_A 7 GMESRCYGCAVKFTLFKKEYGCKNCG-RAFCNGCLSFSAL 45 (88)
T ss_dssp CCCSBCTTTCCBCCSSSCEEECSSSC-CEEETTTSCEEEE
T ss_pred CcCCCCcCcCCcccCccccccCCCCC-CEEChhHcCCcee
Confidence 4667899999864 35678999999 5999999987643
No 175
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=47.41 E-value=7.6 Score=45.15 Aligned_cols=34 Identities=18% Similarity=0.316 Sum_probs=26.4
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
..||+|+||||.||-..|.-+--=||+-++.+-|
T Consensus 131 ~~GDvi~iPaG~~hw~~N~g~~~l~~v~~~d~~n 164 (510)
T 3c3v_A 131 NEGDLIAVPTGVAFWLYNDHDTDVVAVSLTDTNN 164 (510)
T ss_dssp CTTEEEEECTTCEEEEEECSSSCEEEEEEECTTB
T ss_pred cCCCEEEECCCCCEEEEeCCCCCEEEEEEeCCCC
Confidence 5699999999999999999875555554444444
No 176
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=47.26 E-value=5.8 Score=42.05 Aligned_cols=32 Identities=16% Similarity=0.203 Sum_probs=26.1
Q ss_pred HhCccceEEEeecCceEEecCCCccccccccc
Q 002177 821 EFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQS 852 (956)
Q Consensus 821 EyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkS 852 (956)
+|-+..=++.=..||.+|+|+||||+.+|.-.
T Consensus 224 ~~~~~~~~~~v~~GD~~~~~~~~~h~~~n~g~ 255 (278)
T 1sq4_A 224 VYRLNQDWVEVEAGDFMWLRAFCPQACYSGGP 255 (278)
T ss_dssp EEEETTEEEEEETTCEEEEEESCCEEEECCSS
T ss_pred EEEECCEEEEeCCCCEEEECCCCCEEEEcCCC
Confidence 45555666777899999999999999999754
No 177
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=46.56 E-value=9.4 Score=39.09 Aligned_cols=48 Identities=13% Similarity=0.036 Sum_probs=35.0
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSC 246 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~C 246 (956)
.....|.-|..--.+.++ +.|+ ..||..||..|.... ...||+|+...
T Consensus 206 ~~~~~c~i~~~~~~dPv~--~~~g-h~f~~~~i~~~~~~~-----~~~cP~~~~~~ 253 (281)
T 2c2l_A 206 PDYLCGKISFELMREPCI--TPSG-ITYDRKDIEEHLQRV-----GHFNPVTRSPL 253 (281)
T ss_dssp CSTTBCTTTCSBCSSEEE--CSSC-CEEETTHHHHHHHHT-----CSSCTTTCCCC
T ss_pred CcccCCcCcCCHhcCCeE--CCCC-CEECHHHHHHHHHHC-----CCCCcCCCCCC
Confidence 356789999887776665 4588 589999999997431 22399998643
No 178
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=46.51 E-value=7.6 Score=32.17 Aligned_cols=47 Identities=17% Similarity=0.382 Sum_probs=33.2
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|.....+.++.=..|+...||..|+.++... .+.||.||.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~------~~~CPiCR~ 52 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKA------GASCPICKK 52 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHT------TCBCTTTCC
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHh------CCcCCCcCc
Confidence 45678889877666554334577545999999876532 378999997
No 179
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=46.12 E-value=16 Score=33.50 Aligned_cols=58 Identities=21% Similarity=0.665 Sum_probs=42.8
Q ss_pred cCCCCcccccccCC-CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCcccccccccc
Q 002177 191 TGGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGSCNCKACLRA 254 (956)
Q Consensus 191 ~~~~~CHQCrqkt~-~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~CNCs~Clr~ 254 (956)
.+...|..|..... ..++.|..|.+ .|=..||......+ ....|.||.|. .|.+|.+.
T Consensus 5 ~~~~~C~~C~~~g~~~~ll~C~~C~~-~~H~~Cl~~~~~~~--~~~~W~C~~C~---~C~~C~~~ 63 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLDQFFCTTCGQ-HYHGMCLDIAVTPL--KRAGWQCPECK---VCQNCKQS 63 (111)
T ss_dssp CCCSCBTTTCCCCCTTTSEECSSSCC-EECTTTTTCCCCTT--TSTTCCCTTTC---CCTTTCCC
T ss_pred CCCCCCcCCCCCCCCcCCeECCCCCC-CcChHHhCCccccc--cccCccCCcCC---cccccCcc
Confidence 36678999987763 46799999995 78888997665322 23579999987 57777544
No 180
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=45.77 E-value=8.2 Score=32.28 Aligned_cols=49 Identities=24% Similarity=0.669 Sum_probs=35.7
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|..|++. +.++.|-.|.+ .|=..||.---.++. .-.|.||.|+.
T Consensus 7 ~~~~~C~vC~~~--g~ll~Cd~C~~-~fH~~Cl~ppl~~~p--~g~W~C~~C~~ 55 (61)
T 1mm2_A 7 HHMEFCRVCKDG--GELLCCDTCPS-SYHIHCLNPPLPEIP--NGEWLCPRCTC 55 (61)
T ss_dssp SSCSSCTTTCCC--SSCBCCSSSCC-CBCSSSSSSCCSSCC--SSCCCCTTTTT
T ss_pred CCCCcCCCCCCC--CCEEEcCCCCH-HHcccccCCCcCcCC--CCccCChhhcC
Confidence 456789999864 46999999995 788888864333322 23799999974
No 181
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=45.72 E-value=16 Score=39.41 Aligned_cols=49 Identities=14% Similarity=0.336 Sum_probs=38.3
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCC--CCCc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPA--CRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~--Crg~ 245 (956)
....+|.-|..--...++ .+.|+ -.||..||..|..+. ..|.||+ |+..
T Consensus 179 ~~el~CPIcl~~f~DPVt-s~~CG-HsFcR~cI~~~~~~~----~~~~CPvtGCr~~ 229 (267)
T 3htk_C 179 KIELTCPITCKPYEAPLI-SRKCN-HVFDRDGIQNYLQGY----TTRDCPQAACSQV 229 (267)
T ss_dssp BCCSBCTTTSSBCSSEEE-ESSSC-CEEEHHHHHHHSTTC----SCEECSGGGCSCE
T ss_pred ceeeECcCccCcccCCee-eCCCC-CcccHHHHHHHHHhC----CCCCCCcccccCc
Confidence 577899999987766554 46798 489999999998642 3489999 9884
No 182
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=45.48 E-value=23 Score=31.48 Aligned_cols=36 Identities=17% Similarity=0.568 Sum_probs=28.2
Q ss_pred CcCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCC
Q 002177 190 DTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (956)
Q Consensus 190 ~~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~ 230 (956)
+.....|+.|+++.--....| .|+ +.||. .-||++.
T Consensus 22 k~~~~RC~~C~kkvgL~~f~C-rCg-~~FCs---~HRy~e~ 57 (74)
T 1wfp_A 22 KSTATRCLSCNKKVGVTGFKC-RCG-STFCG---THRYPES 57 (74)
T ss_dssp TCCCCBCSSSCCBCTTTCEEC-TTS-CEECT---TTCSTTT
T ss_pred cccCccchhhcCcccccceEe-ccC-CEecc---ccCCCcC
Confidence 456789999998865457899 699 58986 6789874
No 183
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=45.09 E-value=8.9 Score=44.11 Aligned_cols=30 Identities=17% Similarity=0.393 Sum_probs=23.4
Q ss_pred EEeecCceEEecCCCccccccccccceeec
Q 002177 829 FEQHLGEAVFIPAGCPFQVRNLQSTVQLGL 858 (956)
Q Consensus 829 f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAl 858 (956)
+.=+.||+|+||||.+|-..|.-+--=|++
T Consensus 115 ~~l~~GDvi~iPaG~~h~~~N~G~~~l~~i 144 (476)
T 1fxz_A 115 YNFREGDLIAVPTGVAWWMYNNEDTPVVAV 144 (476)
T ss_dssp EEECTTEEEEECTTCEEEEEECSSSCEEEE
T ss_pred EEEeCCCEEEECCCCcEEEEeCCCCCEEEE
Confidence 344679999999999999999975444443
No 184
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=45.04 E-value=9.8 Score=41.76 Aligned_cols=27 Identities=7% Similarity=0.105 Sum_probs=24.3
Q ss_pred ccceEEEeecCceEEecCCCccccccc
Q 002177 824 VEPWSFEQHLGEAVFIPAGCPFQVRNL 850 (956)
Q Consensus 824 VEpWtf~Q~lGEAVFIPAGCPHQVRNL 850 (956)
|.+-+|.=..||+++||+|++||++|-
T Consensus 303 v~~~~~~~~~GD~~~vP~~~~H~~~n~ 329 (354)
T 2d40_A 303 IGNETFSFSAKDIFVVPTWHGVSFQTT 329 (354)
T ss_dssp ETTEEEEEETTCEEEECTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEECCCCeEEEEeC
Confidence 457888999999999999999999994
No 185
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=43.99 E-value=17 Score=31.51 Aligned_cols=36 Identities=22% Similarity=0.633 Sum_probs=27.8
Q ss_pred CcCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCC
Q 002177 190 DTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (956)
Q Consensus 190 ~~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~ 230 (956)
+.....|..|+++.--....| .|+ +.||. .-||++.
T Consensus 12 k~~~~rC~~C~kkvgl~~f~C-rCg-~~FC~---~HRy~e~ 47 (64)
T 1wfh_A 12 PQRPNRCTVCRKRVGLTGFMC-RCG-TTFCG---SHRYPEV 47 (64)
T ss_dssp CSSCCCCTTTCCCCCTTCEEC-SSS-CEECT---TTCSTTT
T ss_pred CCcCCcChhhCCccCccCEEe-ecC-CEecc---ccCCccc
Confidence 357789999999854446899 599 58986 6789874
No 186
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=43.67 E-value=18 Score=32.12 Aligned_cols=35 Identities=26% Similarity=0.508 Sum_probs=27.3
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~ 230 (956)
.....|+.|+++.--....|+ |+ +.||. .-||++.
T Consensus 23 ~~~nRC~~CrKkvgL~gf~Cr-Cg-~~FCs---~HRy~e~ 57 (74)
T 1wfl_A 23 PKKNRCFMCRKKVGLTGFDCR-CG-NLFCG---LHRYSDK 57 (74)
T ss_dssp SCTTBCSSSCCBCGGGCEECT-TS-CEECS---SSCSTTT
T ss_pred CcCCcChhhCCcccccCeecC-CC-CEech---hcCCCcc
Confidence 456789999998533458999 99 68986 7899974
No 187
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=43.49 E-value=3 Score=37.45 Aligned_cols=53 Identities=25% Similarity=0.485 Sum_probs=36.5
Q ss_pred cCCCCcccccccCC---CCeEEcCcCCCccccHhHHhhhcCCCc--hhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDR---ERVVWCVKCDKRGYCDSCISTWYSDIP--LEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~---~~~v~C~~C~r~~FC~~CL~~rY~e~~--~edv~~~CP~Crg 244 (956)
.....|..|++.+. +.++.|-.|.+ .|=..|+.-...... ..+-.|.||.|+.
T Consensus 14 e~~~~C~vC~~~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~ 71 (88)
T 1wev_A 14 EMGLACVVCRQMTVASGNQLVECQECHN-LYHQDCHKPQVTDKEVNDPRLVWYCARCTR 71 (88)
T ss_dssp HHCCSCSSSCCCCCCTTCCEEECSSSCC-EEETTTSSSCCCHHHHHCTTCCCCCHHHHH
T ss_pred CCCCcCCCCCCCCCCCCCceEECCCCCC-eEcCccCCCcccccccCCCCCCeeCccccc
Confidence 36779999999874 67999999995 677777754332100 1123699998854
No 188
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=43.05 E-value=11 Score=42.57 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=25.3
Q ss_pred CccceEEEeecCceEEecCCCcccccc-cc
Q 002177 823 GVEPWSFEQHLGEAVFIPAGCPFQVRN-LQ 851 (956)
Q Consensus 823 GVEpWtf~Q~lGEAVFIPAGCPHQVRN-Lk 851 (956)
-|.+=++.-..||+|+||+|..|+++| --
T Consensus 158 ~v~G~~~~~~~GD~i~~P~g~~H~~~N~~g 187 (394)
T 3bu7_A 158 IVDGHKVELGANDFVLTPNGTWHEHGILES 187 (394)
T ss_dssp EETTEEEEECTTCEEEECTTCCEEEEECTT
T ss_pred EECCEEEEEcCCCEEEECcCCCEEEEcCCC
Confidence 455668999999999999999999999 43
No 189
>2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A
Probab=42.23 E-value=14 Score=34.11 Aligned_cols=30 Identities=13% Similarity=0.179 Sum_probs=24.3
Q ss_pred hCccceEEEeecCceEEecCCCcccccccc
Q 002177 822 FGVEPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 822 yGVEpWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
+-|..=++.=..||++|||+|.+|..++-.
T Consensus 51 ~~i~~~~~~l~~Gd~~~i~p~~~H~~~~~~ 80 (164)
T 2arc_A 51 VKNQGREFVCRPGDILLFPPGEIHHYGRHP 80 (164)
T ss_dssp EEETTEEEEECTTCEEEECTTCCEEEEECT
T ss_pred EEECCEEEEecCCeEEEEcCCCCEEEEeCC
Confidence 345555677789999999999999988864
No 190
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=41.26 E-value=10 Score=38.35 Aligned_cols=48 Identities=25% Similarity=0.598 Sum_probs=34.7
Q ss_pred CCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 193 GQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 193 ~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
...|..|+... .++.|-.|.+ .|-..|+..--.... .-.|.||.|+..
T Consensus 2 ~~~C~~C~~~g--~ll~Cd~C~~-~~H~~Cl~p~l~~~p--~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKPG--DLVMCNQCEF-CFHLDCHLPALQDVP--GEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCCS--SCCCCTTTCC-BCCSTTSTTCCSSCC--CTTCCTTTTSCS
T ss_pred CCcCccCCCCC--ceeECCCCCc-hhccccCCCCcccCC--CCCCCCcCccCC
Confidence 35788998654 5889999995 899999854332222 346999999865
No 191
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=41.09 E-value=12 Score=37.08 Aligned_cols=34 Identities=15% Similarity=0.096 Sum_probs=29.3
Q ss_pred ecCceEEecCCCcccccccc----ccceee-----ccccCCCC
Q 002177 832 HLGEAVFIPAGCPFQVRNLQ----STVQLG-----LDFLFPES 865 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLk----SCIKVA-----lDFVSPEn 865 (956)
..||.+++|+|.+|++.+.. -||-++ +-|+.|..
T Consensus 85 ~aGd~~~~P~g~~H~~~a~~~~~~gci~l~v~~GpL~~~~~~~ 127 (165)
T 3cjx_A 85 TAGCYLYEPGGSIHQFNTPRDNEGQTEVIFMLSGCNVNFTQDG 127 (165)
T ss_dssp ETTEEEEECTTCEECEECCTTCSSCEEEEEEEESCEEEECTTC
T ss_pred CCCeEEEeCCCCceeeEeCCCCCCCcEEEEEEeccceecCCCC
Confidence 58999999999999999998 898777 67877753
No 192
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=41.02 E-value=10 Score=33.63 Aligned_cols=39 Identities=23% Similarity=0.671 Sum_probs=28.4
Q ss_pred ccccCcccc-cccCCCccccc----cccccCCCCCcchhhhhhH
Q 002177 311 RAKLSADEQ-MCCNICRIPII----DYHRHCGNCMYDLCLSCCQ 349 (956)
Q Consensus 311 ~a~~~~DER-vyCDnCkTSIv----D~HRSCp~CsYDLCLsCC~ 349 (956)
+..+..+.+ .||-+|.+.|. .....||.|.+..|..|-.
T Consensus 16 e~~v~~~~~~~wCP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~ 59 (86)
T 2ct7_A 16 EGVLMRDPKFLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKR 59 (86)
T ss_dssp CSCCCSCCCEECCSSSCCCEECCCSCSCEECTTTCCEECSSSCS
T ss_pred HHHHhcCCCEeECcCCCchheecCCCCceEeCCCCCccccccCC
Confidence 344444555 47999999764 3446899999999999964
No 193
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=40.99 E-value=31 Score=31.48 Aligned_cols=48 Identities=17% Similarity=0.516 Sum_probs=34.5
Q ss_pred cCCCCcccccccCCCCeEEcCc--CCCccccHhHHhhhcCCCchh-hhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVK--CDKRGYCDSCISTWYSDIPLE-ELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~--C~r~~FC~~CL~~rY~e~~~e-dv~~~CP~Crg 244 (956)
.....| -|++...+.++.|-+ |.+.-|=..|+. ++.. .-+|.||.|+.
T Consensus 34 ~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg-----l~~~p~g~W~Cp~C~~ 84 (91)
T 1weu_A 34 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG-----LTTKPRGKWFCPRCSQ 84 (91)
T ss_dssp CCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT-----CSSCCCSSCCCTTTCC
T ss_pred CCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC-----cCcCCCCCEECcCccC
Confidence 366788 899987788999999 664457667775 2221 24799999974
No 194
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=40.86 E-value=53 Score=29.71 Aligned_cols=46 Identities=11% Similarity=-0.129 Sum_probs=35.4
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
....+|-=|..--.+.++. .|+ ..||..||..|... ...||+|+..
T Consensus 27 p~~~~CpI~~~~m~dPV~~--~cG-htf~r~~I~~~l~~------~~~cP~~~~~ 72 (100)
T 2kre_A 27 PDEFRDPLMDTLMTDPVRL--PSG-TIMDRSIILRHLLN------SPTDPFNRQT 72 (100)
T ss_dssp STTTBCTTTCSBCSSEEEE--TTT-EEEEHHHHHHHTTS------CSBCSSSCCB
T ss_pred cHhhCCcCccCcccCCeEC--CCC-CEEchHHHHHHHHc------CCCCCCCCCC
Confidence 3567888888777766654 488 57999999999874 3689999863
No 195
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=40.06 E-value=9.1 Score=37.17 Aligned_cols=45 Identities=27% Similarity=0.520 Sum_probs=32.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|--|...-... +.+ .|+ -.||..||..|... ....||.||.
T Consensus 17 ~~~~C~IC~~~~~~p-v~~-~Cg-H~fC~~Ci~~~~~~-----~~~~CP~Cr~ 61 (170)
T 3hcs_A 17 SKYECPICLMALREA-VQT-PCG-HRFCKACIIKSIRD-----AGHKCPVDNE 61 (170)
T ss_dssp GGGBCTTTCSBCSSE-EEC-TTS-CEEEHHHHHHHHHH-----HCSBCTTTCC
T ss_pred CCCCCCCCChhhcCc-EEC-CCC-CHHHHHHHHHHHHh-----CCCCCCCCcc
Confidence 456888998766554 444 699 48999999998742 1238999875
No 196
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=37.91 E-value=12 Score=37.82 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=31.0
Q ss_pred ceE-EEeecCceEEecCCCccccccccccceeeccccCCCCHHH
Q 002177 826 PWS-FEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGE 868 (956)
Q Consensus 826 pWt-f~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~e 868 (956)
+|+ ++..+||.|.||.|.+|...|.... |.++=||+-|-.+
T Consensus 117 a~~~i~L~pGesvtIppg~~H~f~ageeg--vli~EvSt~~dDe 158 (175)
T 2y0o_A 117 VWHEIELEPGGQYTIPPNTKHWFQAGEEG--AVVTEMSSTSTDK 158 (175)
T ss_dssp CCEEEEECTTCEEEECTTCCEEEEEEEEE--EEEEEEEECCCGG
T ss_pred CCcEEEECCCCEEEECCCCcEEEEeCCCC--EEEEEEeCCCCCC
Confidence 444 5899999999999999999995554 5566666655443
No 197
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=37.56 E-value=12 Score=42.32 Aligned_cols=46 Identities=22% Similarity=0.327 Sum_probs=32.3
Q ss_pred CCCcCCceecCHHHHHHHHHHhCc----cceEEEeecCceEEecCCCcccccccc
Q 002177 801 HPLYGEVVYLNGDHKRKLKEEFGV----EPWSFEQHLGEAVFIPAGCPFQVRNLQ 851 (956)
Q Consensus 801 hPIHDQ~fYLt~ehk~kLkEEyGV----EpWtf~Q~lGEAVFIPAGCPHQVRNLk 851 (956)
||-.++.+|+-.-. -.+|| ...++.=..||+++||+|.+|-+.|.-
T Consensus 66 h~~a~E~~yVl~G~-----g~v~~v~~~~~~~~~l~~GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 66 HADADFLLFVLSGR-----AILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp EESEEEEEEEEESC-----EEEEEECSSCEEEEEECTTEEEEECTTCEEEEEECC
T ss_pred cCCCceEEEEEeeE-----EEEEEEECCCCeEEEecCCCEEEECCCCeEEEEecC
Confidence 44445666665441 12333 356777788999999999999999993
No 198
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=36.90 E-value=21 Score=32.45 Aligned_cols=36 Identities=19% Similarity=0.517 Sum_probs=28.1
Q ss_pred CcCCCCcccccccCCC-CeEEcCcCCCccccHhHHhhhcCCC
Q 002177 190 DTGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDI 230 (956)
Q Consensus 190 ~~~~~~CHQCrqkt~~-~~v~C~~C~r~~FC~~CL~~rY~e~ 230 (956)
++....|+.|+++..- ....|+ |+ +.||. .-||++.
T Consensus 22 k~~~~rC~~C~kkvgl~~~f~Cr-Cg-~~FC~---~HRy~e~ 58 (85)
T 1wff_A 22 KKIMKHCFLCGKKTGLATSFECR-CG-NNFCA---SHRYAEA 58 (85)
T ss_dssp CCCCCBCSSSCCBCSSSSCEECT-TC-CEECT---TTCSTGG
T ss_pred cccCccchhhCCeecccCCeEcC-CC-CEecc---cCCCccC
Confidence 4577899999998754 378996 99 58986 6789873
No 199
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=36.85 E-value=15 Score=31.59 Aligned_cols=48 Identities=31% Similarity=0.768 Sum_probs=35.3
Q ss_pred CcccccccC-CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 195 ICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 195 ~CHQCrqkt-~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.|+.|++.. .+.++.|-.|.+ .|=..||..-...+. +...|.||.|+.
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~-~yH~~Cl~Ppl~~~P-~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVP-SEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCC-EEEGGGSSSCCSSCC-SSSCCCCTTTSC
T ss_pred CCcCCCCcCCCCCEEEcCCCCC-ceecccCCCCcCCCC-CCCCcCCcCccC
Confidence 688888876 457999999994 788888875444432 233899999974
No 200
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=36.73 E-value=9.5 Score=31.57 Aligned_cols=47 Identities=28% Similarity=0.746 Sum_probs=34.5
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCC
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACR 243 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Cr 243 (956)
....|..|++. +.++.|-.|. ..|=..|+..-...+. .-.|.||.|.
T Consensus 4 ~~~~C~vC~~~--g~ll~Cd~C~-~~fH~~Cl~ppl~~~p--~g~W~C~~C~ 50 (60)
T 2puy_A 4 HEDFCSVCRKS--GQLLMCDTCS-RVYHLDCLDPPLKTIP--KGMWICPRCQ 50 (60)
T ss_dssp CCSSCTTTCCC--SSCEECSSSS-CEECGGGSSSCCSSCC--CSCCCCHHHH
T ss_pred CCCCCcCCCCC--CcEEEcCCCC-cCEECCcCCCCcCCCC--CCceEChhcc
Confidence 45689999875 5699999999 5888889864333322 2379999884
No 201
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=36.52 E-value=14 Score=32.69 Aligned_cols=48 Identities=31% Similarity=0.772 Sum_probs=34.1
Q ss_pred CcccccccCC-CCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 195 ICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 195 ~CHQCrqkt~-~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.|+.|++... +.++.|-.|.+ .|=..||.---..+. +...|.||.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~-~yH~~Cl~PpL~~~P-~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVP-SEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCC-EEETTTSSSCCSSCC-SSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCC-ccCcccCCCcccCCC-CCCceECcCccc
Confidence 7889988874 57899999995 788888864333322 222499999985
No 202
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=36.34 E-value=16 Score=42.13 Aligned_cols=81 Identities=11% Similarity=0.046 Sum_probs=46.2
Q ss_pred cCCCCcCCceecCHHH-HHHHHHHhCccceEEEeecCceEEecCCCccccccccccceeeccccCCCCHHHHHHH---HH
Q 002177 799 VTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL---AE 874 (956)
Q Consensus 799 v~hPIHDQ~fYLt~eh-k~kLkEEyGVEpWtf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL---te 874 (956)
-.||-.++.+|+..-. +..+-.+-|-+-.+..=..||.++||+|.||.+.|...-+.+..=|+||.. .. ..| +.
T Consensus 354 H~Hp~a~Ei~yVl~G~~~v~v~~~~G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~~s~~p-~~-~~laG~~s 431 (476)
T 1fxz_A 354 HYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTP-MI-GTLAGANS 431 (476)
T ss_dssp EEETTCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEESSSSC-CE-EESSSTTC
T ss_pred eECCCCCEEEEEEeCEEEEEEEecCCCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEECCCCC-ce-eEccchhH
Confidence 3577777777766542 111111222222333357899999999999999996544554444446532 11 123 35
Q ss_pred HHhcCCc
Q 002177 875 EIRCLPN 881 (956)
Q Consensus 875 EfR~Lp~ 881 (956)
=|+.+|.
T Consensus 432 ~~~~~p~ 438 (476)
T 1fxz_A 432 LLNALPE 438 (476)
T ss_dssp TGGGSCH
T ss_pred HHHhCCH
Confidence 5677776
No 203
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=36.11 E-value=17 Score=33.70 Aligned_cols=46 Identities=22% Similarity=0.596 Sum_probs=32.2
Q ss_pred CCCeEEcCcCCCccccHhHHhhhcCCCc--hhhhhhcCCCCCCcccccccccc
Q 002177 204 RERVVWCVKCDKRGYCDSCISTWYSDIP--LEELEKVCPACRGSCNCKACLRA 254 (956)
Q Consensus 204 ~~~~v~C~~C~r~~FC~~CL~~rY~e~~--~edv~~~CP~Crg~CNCs~Clr~ 254 (956)
.+.++.|..|++ .|=..||..... ++ .....|.||.|+ .|.+|.+.
T Consensus 23 ~~~Ll~C~~C~~-~~H~~Cl~~~~~-~~~~~~~~~W~C~~C~---~C~vC~~~ 70 (112)
T 3v43_A 23 PEELISCADCGN-SGHPSCLKFSPE-LTVRVKALRWQCIECK---TCSSCRDQ 70 (112)
T ss_dssp CCCCEECTTTCC-EECHHHHTCCHH-HHHHHHTSCCCCTTTC---CBTTTCCC
T ss_pred chhceEhhhcCC-CCCCchhcCCHH-HHHHhhccccccccCC---ccccccCc
Confidence 457999999995 788889853211 11 123479999998 58888754
No 204
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=35.86 E-value=9.3 Score=32.29 Aligned_cols=16 Identities=31% Similarity=0.974 Sum_probs=13.4
Q ss_pred CCCCcccC--------------CCCcceec
Q 002177 19 DDLRCKRS--------------DGKQWRCT 34 (956)
Q Consensus 19 ~~~rc~r~--------------dgk~wrc~ 34 (956)
++.||+|+ +||+|+|.
T Consensus 8 ~pvRC~r~~CraylNP~~~~~~~~~~W~C~ 37 (59)
T 2yrc_A 8 EPVLCSRTTCRAVLNPLCQVDYRAKLWACN 37 (59)
T ss_dssp CCCBCSCTTTCCBCCTTSEEEGGGTEEECS
T ss_pred CCcccCCCCCCeEECCceEEECCCCEEEcc
Confidence 68899992 58999995
No 205
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=35.78 E-value=62 Score=28.05 Aligned_cols=47 Identities=26% Similarity=0.528 Sum_probs=34.3
Q ss_pred cCCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcCCCchhh----hhhcCCCCCC
Q 002177 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEE----LEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~e~~~ed----v~~~CP~Crg 244 (956)
.....| -|++.. .+.+|.|-.|. .-|=..|+. ++.+. ..|.||.|+.
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~-~WfH~~Cvg-----l~~~~~~~~~~~~C~~C~~ 62 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQ-DWFHGSCVG-----IEEENAVDIDIYHCPDCEA 62 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTC-CEEEHHHHT-----CCHHHHTTCSBBCCTTTTT
T ss_pred CCccEE-EcCCccCCCCceEEcCCCC-CcEEeeecC-----cccccccCCCeEECCCccc
Confidence 466778 788865 56799999998 467777773 34432 3699999986
No 206
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=35.22 E-value=10 Score=37.24 Aligned_cols=47 Identities=28% Similarity=0.675 Sum_probs=35.0
Q ss_pred cCCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcCCCchhh----hhhcCCCCCC
Q 002177 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYSDIPLEE----LEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~e~~~ed----v~~~CP~Crg 244 (956)
.....| -|++.. .+.++.|-.|. .-|-..|+. ++..+ -.|.||.|+.
T Consensus 6 ~~~~~C-~C~~~~~~~~~mi~Cd~C~-~WfH~~Cv~-----~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 6 DTKLYC-ICKTPEDESKFYIGCDRCQ-NWYHGRCVG-----ILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp -CCEET-TTTEECCTTSCEEECTTTC-CEEEHHHHT-----CCHHHHTTCSSCCCHHHHH
T ss_pred CCCcEe-eCCCCCCCCCCEeECCCCC-chhChhhcC-----CchhhccCccCeecCCCcc
Confidence 467788 898864 45699999999 589999983 33332 3699999875
No 207
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=34.85 E-value=7 Score=37.25 Aligned_cols=36 Identities=22% Similarity=0.469 Sum_probs=28.5
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcC
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~ 228 (956)
....|..|..+- ..+.-.|+.|+ ..||..|...+.+
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG-~vfC~~Cs~~~~~ 105 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCG-NIFCAECSAKNAL 105 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTC-CEECGGGSCEEEC
T ss_pred CCCCCcCcCCccccccccccCCCCC-eEEChHHhCCccc
Confidence 456799999864 34677999999 5999999988754
No 208
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=34.61 E-value=11 Score=36.19 Aligned_cols=41 Identities=22% Similarity=0.306 Sum_probs=35.8
Q ss_pred CCCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCCC
Q 002177 801 HPLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAGC 843 (956)
Q Consensus 801 hPIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAGC 843 (956)
=|.|...-.+.+.+-+.|.++|||.-|.| +-||-|.|=||=
T Consensus 15 Ap~h~rrk~msa~LskeLr~ky~vr~~~I--kkGD~V~Vi~G~ 55 (120)
T 1vq8_T 15 APLHERHKQVRATLSADLREEYGQRNVRV--NAGDTVEVLRGD 55 (120)
T ss_dssp CCGGGSGGGGEEEECHHHHHHHTCSEEEC--CTTCEEEECSST
T ss_pred CCcchhhheeeCcCCHHHHHhhccccccc--cCCCEEEEEecC
Confidence 38889988888888889999999999876 679999999983
No 209
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=34.03 E-value=20 Score=31.03 Aligned_cols=48 Identities=17% Similarity=0.516 Sum_probs=34.6
Q ss_pred cCCCCcccccccCCCCeEEcCc--CCCccccHhHHhhhcCCCchh-hhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVK--CDKRGYCDSCISTWYSDIPLE-ELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~--C~r~~FC~~CL~~rY~e~~~e-dv~~~CP~Crg 244 (956)
.....| -|++...+.++.|-+ |.+.-|=..|+. ++.. .-.|.||.|+.
T Consensus 14 ~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg-----l~~~p~g~w~Cp~C~~ 64 (71)
T 1wen_A 14 NEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG-----LTTKPRGKWFCPRCSQ 64 (71)
T ss_dssp TSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT-----CSSCCSSCCCCTTTSS
T ss_pred CCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC-----cCcCCCCCEECCCCCc
Confidence 366789 599987788999999 764467677775 2222 24799999964
No 210
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=32.04 E-value=17 Score=32.59 Aligned_cols=35 Identities=20% Similarity=0.560 Sum_probs=28.2
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhc
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY 227 (956)
....|..|+++= ..+.-.|+.|+ ..||..|...+-
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG-~v~C~~Cs~~~~ 55 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACG-KVFCGVCCNRKC 55 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTC-CEECGGGSCEEE
T ss_pred cCCcCcCCCCcccchhhCccccCCC-CEECCcccCCee
Confidence 567899999764 34678899999 599999998874
No 211
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=31.90 E-value=9.7 Score=36.01 Aligned_cols=26 Identities=31% Similarity=0.811 Sum_probs=0.0
Q ss_pred cCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 212 KCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 212 ~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.|+ -.|+..||..|... ...||.||.
T Consensus 83 ~C~-H~FH~~CI~~Wl~~------~~~CP~Cr~ 108 (117)
T 4a0k_B 83 VCN-HAFHFHCISRWLKT------RQVCPLDNR 108 (117)
T ss_dssp ---------------------------------
T ss_pred CcC-ceEcHHHHHHHHHc------CCcCCCCCC
Confidence 577 58999999999764 357999986
No 212
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=31.23 E-value=26 Score=30.59 Aligned_cols=37 Identities=27% Similarity=0.645 Sum_probs=29.8
Q ss_pred ccCcCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhc
Q 002177 188 SEDTGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWY 227 (956)
Q Consensus 188 ~~~~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY 227 (956)
++......|..|... ..++|..|....||.+|.+.--
T Consensus 3 ~~~ee~pWC~ICneD---AtlrC~gCdgDLYC~rC~rE~H 39 (67)
T 2d8v_A 3 SGSSGLPWCCICNED---ATLRCAGCDGDLYCARCFREGH 39 (67)
T ss_dssp SSCCCCSSCTTTCSC---CCEEETTTTSEEECSSHHHHHT
T ss_pred CcCcCCCeeEEeCCC---CeEEecCCCCceehHHHHHHHc
Confidence 445677899999865 3689999987899999987654
No 213
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=31.20 E-value=22 Score=40.31 Aligned_cols=33 Identities=27% Similarity=0.206 Sum_probs=26.1
Q ss_pred ceEEEeecCceEEecCCCcccccccc-ccceeec
Q 002177 826 PWSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGL 858 (956)
Q Consensus 826 pWtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAl 858 (956)
..++.=..||+++||+|.+|-+.|.- ++-=+++
T Consensus 102 ~~~~~l~~GDv~~iP~G~~H~~~N~g~~e~l~~l 135 (434)
T 2ea7_A 102 RDSYILEQGHAQKIPAGTTFFLVNPDDNENLRII 135 (434)
T ss_dssp EEEEEEETTEEEEECTTCEEEEEECCSSCCEEEE
T ss_pred CEEEEeCCCCEEEECCCccEEEEeCCCCCCeEEE
Confidence 45777788999999999999999996 5433333
No 214
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=31.14 E-value=21 Score=41.61 Aligned_cols=118 Identities=10% Similarity=-0.029 Sum_probs=60.3
Q ss_pred CCCceeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccCCCCcCCceecCHHH-HHHHHHHhCccceEEEeecCceEE
Q 002177 760 THPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVF 838 (956)
Q Consensus 760 ~~~GAlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLt~eh-k~kLkEEyGVEpWtf~Q~lGEAVF 838 (956)
..+|.+.-+... +.|-|.. |.--...+...-+.....-.||-.++.+|+..-. +..+-.+-|-+-.+..=..||+++
T Consensus 351 ~~gG~v~~~~~~-~fP~L~~-l~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G~~~~~~~l~~GDv~v 428 (510)
T 3c3v_A 351 PQAGSLKTANEL-NLLILRW-LGLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNGNRVYDEELQEGHVLV 428 (510)
T ss_dssp TTTEEEEEECTT-TSTTHHH-HTCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCccccc-ceEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCCCEEEeEEEcCCcEEE
Confidence 457777777764 5777652 2110111111111111113678777877776542 111111222233333367899999
Q ss_pred ecCCCccccccccccceeeccccCCCCHHHHHHH---HHHHhcCCc
Q 002177 839 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRL---AEEIRCLPN 881 (956)
Q Consensus 839 IPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rL---teEfR~Lp~ 881 (956)
||+|.||-+.|...-+.+..=|+|+ |-.. ..| +.=|+.+|.
T Consensus 429 iP~G~~H~~~Ng~e~l~~l~f~~s~-~p~~-~~LaG~~svf~~lp~ 472 (510)
T 3c3v_A 429 VPQNFAVAGKSQSDNFEYVAFKTDS-RPSI-ANLAGENSVIDNLPE 472 (510)
T ss_dssp ECTTCEEEEEECSSEEEEEEEESSS-SCCE-EESSSTTSTTTTSCH
T ss_pred ECCCCeEEEEeCCCCEEEEEEECCC-Ccce-eecccHhHHHHhCCH
Confidence 9999999999964444444433354 2211 122 344666765
No 215
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.09 E-value=14 Score=35.52 Aligned_cols=39 Identities=26% Similarity=0.413 Sum_probs=34.6
Q ss_pred CCcCCceecCHHHHHHHHHHhCccceEEEeecCceEEecCC
Q 002177 802 PLYGEVVYLNGDHKRKLKEEFGVEPWSFEQHLGEAVFIPAG 842 (956)
Q Consensus 802 PIHDQ~fYLt~ehk~kLkEEyGVEpWtf~Q~lGEAVFIPAG 842 (956)
|.|...-++.+.+=..|.++|||.-|.| +-||-|.|=+|
T Consensus 19 p~h~r~k~msa~LSkeLR~ky~~r~~~I--kkGD~V~Vi~G 57 (121)
T 3j21_U 19 PLHVRQKLMSAPLSRELREKYKVRNLPV--RVGDKVRIMRG 57 (121)
T ss_dssp CTTGGGGGSEEEBCHHHHHHTCCSEEEC--CSSSEEEECSS
T ss_pred CcchhhhhhcCcCCHHHHHHhCCccccc--ccCCEEEEeec
Confidence 7888888888888888999999999988 57999999998
No 216
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=30.88 E-value=24 Score=40.15 Aligned_cols=32 Identities=28% Similarity=0.342 Sum_probs=25.6
Q ss_pred eEEEeecCceEEecCCCcccccccc-ccceeec
Q 002177 827 WSFEQHLGEAVFIPAGCPFQVRNLQ-STVQLGL 858 (956)
Q Consensus 827 Wtf~Q~lGEAVFIPAGCPHQVRNLk-SCIKVAl 858 (956)
.++.=+.||.++||+|.+|.+.|.- ++-=+++
T Consensus 128 ~~~~l~~GDv~~~P~G~~H~~~N~g~~~~l~~l 160 (445)
T 2cav_A 128 DTYKLDQGDAIKIQAGTPFYLINPDNNQNLRIL 160 (445)
T ss_dssp EEEEEETTEEEEECTTCCEEEEECCSSCCEEEE
T ss_pred EEEEecCCCEEEECCCCcEEEEECCCCCCEEEE
Confidence 5677788999999999999999996 5543333
No 217
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=30.81 E-value=14 Score=38.91 Aligned_cols=50 Identities=30% Similarity=0.700 Sum_probs=32.7
Q ss_pred CCCcccccccC-CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 193 GQICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 193 ~~~CHQCrqkt-~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.-.|..|++.. .+.++.|-.|.+ .|=..||..--..+. +...|.||.|+.
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~-~yH~~CL~PPL~~vP-~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDM-AFHIYCLDPPLSSVP-SEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCC-EECSCC--CCCCSCC-SSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCc-ceeCccCCCCcccCC-CCCCCCCcCCcC
Confidence 34799999876 457899999995 677778864333322 223799999974
No 218
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=30.75 E-value=17 Score=31.77 Aligned_cols=45 Identities=11% Similarity=-0.134 Sum_probs=33.8
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|-=|..--.+.++. .|| ..||..||..|..+ ...||+|+.
T Consensus 12 p~~~~CpI~~~~m~dPV~~--~cG-htf~r~~I~~~l~~------~~~cP~~~~ 56 (85)
T 2kr4_A 12 PDEFRDPLMDTLMTDPVRL--PSG-TVMDRSIILRHLLN------SPTDPFNRQ 56 (85)
T ss_dssp CTTTBCTTTCSBCSSEEEC--TTS-CEEEHHHHHHHHHH------CSBCTTTCC
T ss_pred chheECcccCchhcCCeEC--CCC-CEECHHHHHHHHhc------CCCCCCCcC
Confidence 3567888887766665553 488 48999999999853 368999985
No 219
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.73 E-value=11 Score=34.04 Aligned_cols=51 Identities=29% Similarity=0.683 Sum_probs=36.2
Q ss_pred cCCCCcccccccC-CCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 191 TGGQICHQCRRND-RERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 191 ~~~~~CHQCrqkt-~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
.....|..|++.. .+.++.|-.|.+ .|=..||..--.++. .-.|.||.|+.
T Consensus 14 ~~~~~C~vC~~~~~~~~ll~CD~C~~-~~H~~Cl~Ppl~~~P--~g~W~C~~C~~ 65 (92)
T 2e6r_A 14 IDSYICQVCSRGDEDDKLLFCDGCDD-NYHIFCLLPPLPEIP--RGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCSSSCCSGGGGGCEECTTTCC-EECSSSSSSCCSSCC--SSCCCCHHHHH
T ss_pred cCCCCCccCCCcCCCCCEEEcCCCCc-hhccccCCCCcccCC--CCCcCCccCcC
Confidence 4667899999887 357999999995 677778753222222 23799999853
No 220
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=30.55 E-value=23 Score=29.35 Aligned_cols=32 Identities=25% Similarity=0.717 Sum_probs=24.9
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccH-hHHhh
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCD-SCIST 225 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~-~CL~~ 225 (956)
.....|..|... ....|+.|+.-.||. .|-..
T Consensus 11 ~~~~~C~~C~~~---~~~~Cs~C~~v~YCs~~CQ~~ 43 (60)
T 2od1_A 11 DSSESCWNCGRK---ASETCSGCNTARYCGSFCQHK 43 (60)
T ss_dssp CCSSCCTTTSSC---CCEECTTTSCCEESSHHHHHH
T ss_pred CCCCccccCCCc---ccccCCCCCCeeecCHHHHHH
Confidence 467899999973 467999999888996 56544
No 221
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=29.78 E-value=39 Score=28.88 Aligned_cols=50 Identities=28% Similarity=0.617 Sum_probs=36.8
Q ss_pred CCCCcccccccCCC-CeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~~-~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg 244 (956)
....|.-|++...+ .++.|-.|. .-|=..|+.---.. .....|.||.|+.
T Consensus 17 ~~~~C~~C~~~~~~~~mi~CD~C~-~wfH~~Cv~~~~~~--~~~~~w~C~~C~~ 67 (75)
T 2k16_A 17 QIWICPGCNKPDDGSPMIGCDDCD-DWYHWPCVGIMAAP--PEEMQWFCPKCAN 67 (75)
T ss_dssp EEECBTTTTBCCSSCCEEECSSSS-SEEEHHHHTCSSCC--CSSSCCCCTTTHH
T ss_pred CCcCCCCCCCCCCCCCEEEcCCCC-cccccccCCCCccC--CCCCCEEChhccC
Confidence 55679999988765 699999999 57888888643322 1235799999963
No 222
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=29.32 E-value=24 Score=31.14 Aligned_cols=35 Identities=20% Similarity=0.430 Sum_probs=28.5
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhc
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY 227 (956)
....|..|+++= ..+.-.|+.|+ ..||..|...+.
T Consensus 20 ~~~~C~~C~~~Fs~~~RrHHCR~CG-~v~C~~Cs~~~~ 56 (84)
T 1z2q_A 20 DAPACNGCGCVFTTTVRRHHCRNCG-YVLCGDCSRHRA 56 (84)
T ss_dssp TCCBCTTTCCBCCTTSCCEECTTTC-CEECTGGGCCEE
T ss_pred CCCCCcCcCCccccchhcccccCCC-cEEChHHhCCeE
Confidence 566899999875 34678999999 599999998874
No 223
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=28.31 E-value=27 Score=38.00 Aligned_cols=53 Identities=19% Similarity=0.285 Sum_probs=33.3
Q ss_pred EEEeecCceEEecCCCccccccccccceeeccccCCCCHHH--HHHHHHHHhcCCc
Q 002177 828 SFEQHLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESVGE--AVRLAEEIRCLPN 881 (956)
Q Consensus 828 tf~Q~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV~e--C~rLteEfR~Lp~ 881 (956)
++.=..||.++||+|.+|.++|...-.. .+..++|....+ -+.++.=|+.+|.
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~p~ 177 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALEEGAE-FLLVFDDGSFSENSTFQLTDWLAHTPK 177 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEEEEEE-EEEEESCTTCCGGGEEEHHHHHHTSCH
T ss_pred EEEeCCCCEEEECCCCeEEEEECCCCEE-EEEEECCCCccccchhhhhhhhhcccH
Confidence 5577899999999999999999865322 233334443321 1124555566654
No 224
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=27.92 E-value=15 Score=42.42 Aligned_cols=118 Identities=10% Similarity=0.078 Sum_probs=61.5
Q ss_pred CCCceeeeeccCCChhHHHHHHHHHHHHhCCCCCCCCCccCCCCcCCceecCHHH-HHHHHHHhCccceEEEeecCceEE
Q 002177 760 THPGAHWDVFRRQDVPKLIEYLREHWTDFGRPDGVTNDFVTHPLYGEVVYLNGDH-KRKLKEEFGVEPWSFEQHLGEAVF 838 (956)
Q Consensus 760 ~~~GAlWDIFrreDv~KLreyL~kh~~Ef~~~~~~~~~~v~hPIHDQ~fYLt~eh-k~kLkEEyGVEpWtf~Q~lGEAVF 838 (956)
..+|.+.-+... +.|-|... ..-...+...-+.....-.||=.++.+|+..-. +..+-.+.|-+-.+..=..||+++
T Consensus 346 ~~gG~v~~~~~~-~~P~L~~l-gls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g~~~~~~~l~~GDv~v 423 (493)
T 2d5f_A 346 PKAGRISTLNSL-TLPALRQF-GLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQGNAVFDGELRRGQLLV 423 (493)
T ss_dssp TTTEEEEEESTT-TSTTHHHH-TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTCEEE
T ss_pred CCCeEEEEeccc-cCcccccc-ceEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCCCEEEeEEEcCCCEEE
Confidence 457778777654 67776532 111111111111111113577777777775542 111111222222333457899999
Q ss_pred ecCCCccccccccccceeeccccCCCCHHHHHHHHHHHhcCCc
Q 002177 839 IPAGCPFQVRNLQSTVQLGLDFLFPESVGEAVRLAEEIRCLPN 881 (956)
Q Consensus 839 IPAGCPHQVRNLkSCIKVAlDFVSPEnV~eC~rLteEfR~Lp~ 881 (956)
||+|.||...|...-..+..=|.|+..-.. .|+.=|+.+|.
T Consensus 424 vP~G~~H~~~n~~e~~~~l~~~ts~~p~~~--~l~s~~~~~p~ 464 (493)
T 2d5f_A 424 VPQNFVVAEQGGEQGLEYVVFKTHHNAVSS--YIKDVFRAIPS 464 (493)
T ss_dssp ECTTCEEEEEEEEEEEEEEEEESSTTCCEE--EHHHHHHHSCH
T ss_pred ECCCCeEeeeeCCCCEEEEEEECCCCCcce--eHHHHHHhCCH
Confidence 999999999997644444333333322111 12666777886
No 225
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=27.58 E-value=22 Score=34.02 Aligned_cols=26 Identities=4% Similarity=-0.217 Sum_probs=22.3
Q ss_pred ecCceEEecCCCccc-cccccccceee
Q 002177 832 HLGEAVFIPAGCPFQ-VRNLQSTVQLG 857 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQ-VRNLkSCIKVA 857 (956)
..||.+++|+|.+|+ +.+...|+=+.
T Consensus 89 ~~Gd~~~~p~g~~H~p~~~~e~~~~l~ 115 (145)
T 2o1q_A 89 IAPGYGYESANARHDKTEFPVASEFYM 115 (145)
T ss_dssp ESSEEEEECTTCEESCCEEEEEEEEEE
T ss_pred CCCEEEEECcCCccCCeECCCCeEEEE
Confidence 689999999999999 88888886443
No 226
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=26.88 E-value=26 Score=30.79 Aligned_cols=36 Identities=25% Similarity=0.660 Sum_probs=28.7
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcC
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~ 228 (956)
....|..|.++= ..+.-.|..|| ..||..|..++.+
T Consensus 18 ~~~~C~~C~~~Fs~~~RrHHCR~CG-~v~C~~Cs~~~~~ 55 (82)
T 2yw8_A 18 EATHCRQCEKEFSISRRKHHCRNCG-HIFCNTCSSNELA 55 (82)
T ss_dssp CCCBCTTTCCBCBTTBCCEECTTTC-CEECSGGGCEEEC
T ss_pred cCCcccCcCCcccCccccccCCCCC-CEEChHHhCCeee
Confidence 456799999865 24577999999 5999999988754
No 227
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=26.52 E-value=42 Score=39.31 Aligned_cols=36 Identities=19% Similarity=0.501 Sum_probs=28.8
Q ss_pred cccccccCCCccccccccccCC--CC---CcchhhhhhHHh
Q 002177 316 ADEQMCCNICRIPIIDYHRHCG--NC---MYDLCLSCCQDL 351 (956)
Q Consensus 316 ~DERvyCDnCkTSIvD~HRSCp--~C---sYDLCLsCC~EL 351 (956)
.+...||..|++-+|++.-.|+ +| .++.|+.|..+-
T Consensus 455 ~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~ 495 (531)
T 3avr_A 455 EEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKT 495 (531)
T ss_dssp TCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHH
T ss_pred CCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhc
Confidence 4567899999999999997774 23 247999999974
No 228
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.06 E-value=26 Score=30.87 Aligned_cols=37 Identities=19% Similarity=0.450 Sum_probs=29.3
Q ss_pred cCCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcC
Q 002177 191 TGGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (956)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~ 228 (956)
.....|..|+++= ..+.--|+.|+ ..||..|..++.+
T Consensus 12 ~~~~~C~~C~~~F~~~~RrHHCR~CG-~vfC~~Cs~~~~~ 50 (84)
T 1x4u_A 12 NNFGNCTGCSATFSVLKKRRSCSNCG-NSFCSRCCSFKVP 50 (84)
T ss_dssp CCCSSCSSSCCCCCSSSCCEECSSSC-CEECTTTSCEEEC
T ss_pred CCCCcCcCcCCccccchhhhhhcCCC-cEEChhhcCCcee
Confidence 3566899999875 34677899999 5999999987754
No 229
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=25.83 E-value=20 Score=34.15 Aligned_cols=36 Identities=22% Similarity=0.553 Sum_probs=25.8
Q ss_pred CCCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcC
Q 002177 192 GGQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (956)
Q Consensus 192 ~~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~ 228 (956)
....|..|..+= ..+.-.|.+|+ +.||..|..++.+
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG-~ifC~~Cs~~~~~ 55 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCK-KNFCMTCSSQVGN 55 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTC-CEECGGGEEC---
T ss_pred ccCcccCcCCccccccccccCCCCC-CeeCHHHhCCCCC
Confidence 346899998764 23577899999 5999999988865
No 230
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=25.65 E-value=20 Score=36.74 Aligned_cols=35 Identities=29% Similarity=0.838 Sum_probs=27.9
Q ss_pred CCCcccccccC--CCCeEEcCcCCCccccHhHHhhhcC
Q 002177 193 GQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWYS 228 (956)
Q Consensus 193 ~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY~ 228 (956)
...|+.|+++= ..+.-.|+.|| ..||..|...+.+
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG-~v~C~~Cs~~~~~ 197 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCG-QVFCGQCTAKQCP 197 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTC-CEECSTTSCEEEE
T ss_pred CCccCCCCCccCCcccccccCCcC-CEEChHHhCCeee
Confidence 36899998764 34678999999 5999999988753
No 231
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=25.46 E-value=19 Score=33.64 Aligned_cols=13 Identities=46% Similarity=1.671 Sum_probs=11.9
Q ss_pred cccHhHHhhhcCC
Q 002177 217 GYCDSCISTWYSD 229 (956)
Q Consensus 217 ~FC~~CL~~rY~e 229 (956)
.||..||.+||.+
T Consensus 42 GFCRNCLskWy~~ 54 (105)
T 2o35_A 42 GFCRNCLSNWYRE 54 (105)
T ss_dssp SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5999999999985
No 232
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=25.21 E-value=24 Score=30.34 Aligned_cols=33 Identities=21% Similarity=0.484 Sum_probs=26.4
Q ss_pred CCcccccccC--CCCeEEcCcCCCccccHhHHhhhc
Q 002177 194 QICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (956)
Q Consensus 194 ~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY 227 (956)
..|..|+++= ..+.-.|+.|+ ..||..|..++.
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG-~v~C~~Cs~~~~ 46 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCG-GVFCQEHSSNSI 46 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTC-CEECGGGSCEEE
T ss_pred CcccCCCCccCCccccccCCCCC-EEEcccccCCeE
Confidence 4799999764 34678999999 599999997664
No 233
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=25.18 E-value=20 Score=33.54 Aligned_cols=13 Identities=23% Similarity=1.237 Sum_probs=11.8
Q ss_pred cccHhHHhhhcCC
Q 002177 217 GYCDSCISTWYSD 229 (956)
Q Consensus 217 ~FC~~CL~~rY~e 229 (956)
.||..||.+||.+
T Consensus 41 GFCRNCLskWy~~ 53 (104)
T 3fyb_A 41 DFCRNCLAKWLME 53 (104)
T ss_dssp SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5999999999985
No 234
>2pzo_E CAP-Gly domain-containing linker protein 1; structural protein microtubule binding, dynactin, cytoskeleton associated protein, P150glued; 2.60A {Homo sapiens} PDB: 3e2u_E
Probab=25.03 E-value=17 Score=28.99 Aligned_cols=12 Identities=33% Similarity=1.005 Sum_probs=7.0
Q ss_pred cccccccCCCcc
Q 002177 316 ADEQMCCNICRI 327 (956)
Q Consensus 316 ~DERvyCDnCkT 327 (956)
..||.|||+|-+
T Consensus 17 ~~eRpYCd~CEv 28 (42)
T 2pzo_E 17 GEERPYCEICEM 28 (42)
T ss_dssp ----CEETTTTE
T ss_pred ccCCcccccccc
Confidence 378999999964
No 235
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=24.93 E-value=29 Score=39.95 Aligned_cols=34 Identities=15% Similarity=0.041 Sum_probs=25.6
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCC
Q 002177 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPES 865 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEn 865 (956)
+.||+|.||||.||=.-|.-.-==+++-++.|=|
T Consensus 150 ~~GDvi~iPaG~~~~~~N~g~e~L~~l~~~d~~n 183 (466)
T 3kgl_A 150 RTGDTIATHPGVAQWFYNDGNQPLVIVSVLDLAS 183 (466)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEEESSS
T ss_pred cCCCEEEECCCCcEEEEeCCCCcEEEEEEEcCCC
Confidence 5699999999999999998755444555555544
No 236
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=24.89 E-value=21 Score=36.98 Aligned_cols=34 Identities=29% Similarity=0.745 Sum_probs=27.1
Q ss_pred CCCcccccccC--CCCeEEcCcCCCccccHhHHhhhc
Q 002177 193 GQICHQCRRND--RERVVWCVKCDKRGYCDSCISTWY 227 (956)
Q Consensus 193 ~~~CHQCrqkt--~~~~v~C~~C~r~~FC~~CL~~rY 227 (956)
...|..|+++= ..+.-.|++|+ ..||..|..++-
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG-~v~C~~Cs~~~~ 199 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACG-QIFCGKCSSKYS 199 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTC-CEECTTTCCEEE
T ss_pred CCCCcCcCCCCCccccccccCCCc-CEeChhhcCCcc
Confidence 35899998755 34578999999 599999998764
No 237
>1x4v_A Hypothetical protein LOC130617; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.84 E-value=58 Score=27.91 Aligned_cols=35 Identities=23% Similarity=0.546 Sum_probs=28.1
Q ss_pred cCCCCccc--ccccCCCCeEEcCcCCCccccHhHHhhhcCCC
Q 002177 191 TGGQICHQ--CRRNDRERVVWCVKCDKRGYCDSCISTWYSDI 230 (956)
Q Consensus 191 ~~~~~CHQ--Crqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~ 230 (956)
+.+..|-. |++++.- .+.|..|+ +.|| +.-||++.
T Consensus 10 ~~~~~Cs~~~Ck~~~ll-~f~C~~C~-~~FC---~~HR~~e~ 46 (63)
T 1x4v_A 10 IFTNKCERAGCRQREMM-KLTCERCS-RNFC---IKHRHPLD 46 (63)
T ss_dssp TTCCCCCSTTCCCCCSS-CCBCSSSC-CBCC---HHHHSTTS
T ss_pred ccCCCCCccCCCCCCcc-ceECCCCC-cccC---cccCCccC
Confidence 57889998 9999753 56899999 5887 58899874
No 238
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=24.65 E-value=27 Score=31.33 Aligned_cols=31 Identities=26% Similarity=0.647 Sum_probs=28.1
Q ss_pred ccccCCCccccccccccCCCCCcchhhhhhH
Q 002177 319 QMCCNICRIPIIDYHRHCGNCMYDLCLSCCQ 349 (956)
Q Consensus 319 RvyCDnCkTSIvD~HRSCp~CsYDLCLsCC~ 349 (956)
...||.|...+..+-=.|..|.|+|=+.|-.
T Consensus 47 ~~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~ 77 (89)
T 1v5n_A 47 VYTCDKCEEEGTIWSYHCDECDFDLHAKCAL 77 (89)
T ss_dssp SCCCTTTSCCCCSCEEECTTTCCCCCHHHHH
T ss_pred CeEeCCCCCcCCCcEEEcCCCCCeEcHHhcC
Confidence 3569999999999999999999999999975
No 239
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=23.82 E-value=36 Score=39.21 Aligned_cols=35 Identities=14% Similarity=0.151 Sum_probs=26.5
Q ss_pred ecCceEEecCCCccccccccccceeeccccCCCCH
Q 002177 832 HLGEAVFIPAGCPFQVRNLQSTVQLGLDFLFPESV 866 (956)
Q Consensus 832 ~lGEAVFIPAGCPHQVRNLkSCIKVAlDFVSPEnV 866 (956)
+.||+|+||||.+|=.-|--+-==|++-++.|-|.
T Consensus 135 ~~GDvi~iPaG~~hw~~N~G~~~lv~v~~~d~~n~ 169 (465)
T 3qac_A 135 REGDIFAMPAGVSHWAYNNGDQPLVAVILIDTANH 169 (465)
T ss_dssp ETTEEEEECTTCEEEEECCSSSCEEEEEEECTTST
T ss_pred cCCCEEEECCCCeEEEEcCCCCCEEEEEEEcCCCc
Confidence 57999999999999999987655555555555443
No 240
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=23.33 E-value=45 Score=28.61 Aligned_cols=46 Identities=22% Similarity=0.690 Sum_probs=33.3
Q ss_pred CCCCcccccccCC-CCeEEcCcCCCccccHhHHhhhcCCCchh--------hhhhcCCCCCC
Q 002177 192 GGQICHQCRRNDR-ERVVWCVKCDKRGYCDSCISTWYSDIPLE--------ELEKVCPACRG 244 (956)
Q Consensus 192 ~~~~CHQCrqkt~-~~~v~C~~C~r~~FC~~CL~~rY~e~~~e--------dv~~~CP~Crg 244 (956)
....| -|++... +.+|.|-.|. .-|=..|+. ++.+ ...|.||.|+.
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~-~WfH~~Cvg-----l~~~~~~~l~~~~~~~~C~~C~~ 69 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCE-EWFHGDCVG-----ISEARGRLLERNGEDYICPNCTI 69 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSC-CEEEHHHHS-----CCHHHHHHHHHHTCCCCCHHHHH
T ss_pred CCCEE-ECCCccCCCCEEEeCCCC-CcEeCeEEc-----cchhhhhhccCCCCeEECcCCcC
Confidence 56889 6998875 4799999999 467777773 3332 23799998863
No 241
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=23.10 E-value=89 Score=28.38 Aligned_cols=35 Identities=20% Similarity=0.544 Sum_probs=27.9
Q ss_pred cCCCCcccccccCCC-CeEEcCcCCCccccHhHHhh
Q 002177 191 TGGQICHQCRRNDRE-RVVWCVKCDKRGYCDSCIST 225 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~-~~v~C~~C~r~~FC~~CL~~ 225 (956)
.....|+-|+..--+ -.|.|-+-.--+||.+|-+.
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~ 48 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRE 48 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHH
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHH
Confidence 467799999876643 58999987767899999754
No 242
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=22.95 E-value=63 Score=32.75 Aligned_cols=47 Identities=23% Similarity=0.629 Sum_probs=32.8
Q ss_pred CCCcccccccCCC-----CeEEcCcCCCccccHhHHhhhcCCCchh----------hhhhcCCCCCCc
Q 002177 193 GQICHQCRRNDRE-----RVVWCVKCDKRGYCDSCISTWYSDIPLE----------ELEKVCPACRGS 245 (956)
Q Consensus 193 ~~~CHQCrqkt~~-----~~v~C~~C~r~~FC~~CL~~rY~e~~~e----------dv~~~CP~Crg~ 245 (956)
|..|--|++.-.. ..+.|-.|++ -|=+.|.. ++.+ ...|.||.|+..
T Consensus 2 G~~CpiC~k~Y~~~~~~~~MIqCd~C~~-W~H~~Cvg-----i~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 2 GNFCPLCDKCYDDDDYESKMMQCGKCDR-WVHSKCEN-----LSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CCBCTTTCCBCTTCCTTCCEEECTTTCC-EEEGGGSS-----CCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred cCcCCCCcCccCCcccCCCeEECCCCCc-ccchhccc-----cCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 6678888876432 3899999994 66667762 4432 236999999874
No 243
>2hqh_E Restin; beta/BETA structure, zinc finger motif, structural protein, binding; 1.80A {Homo sapiens}
Probab=22.67 E-value=21 Score=25.96 Aligned_cols=9 Identities=33% Similarity=1.003 Sum_probs=5.6
Q ss_pred cccccCCCc
Q 002177 318 EQMCCNICR 326 (956)
Q Consensus 318 ERvyCDnCk 326 (956)
+|.||++|-
T Consensus 2 ~RpYCe~CE 10 (26)
T 2hqh_E 2 SRPYCEICE 10 (26)
T ss_dssp --CEETTTT
T ss_pred CCccchHHH
Confidence 678888885
No 244
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=21.84 E-value=43 Score=37.40 Aligned_cols=30 Identities=10% Similarity=0.174 Sum_probs=25.1
Q ss_pred cceEEEeecCceEEecCCCccccccccccc
Q 002177 825 EPWSFEQHLGEAVFIPAGCPFQVRNLQSTV 854 (956)
Q Consensus 825 EpWtf~Q~lGEAVFIPAGCPHQVRNLkSCI 854 (956)
.+=+|.=..||++.||+|++||..|...|+
T Consensus 315 ~~~~~~w~~gD~fvvP~w~~h~~~n~~~a~ 344 (368)
T 3nw4_A 315 NGETTKLEKGDMFVVPSWVPWSLQAETQFD 344 (368)
T ss_dssp TTEEEEECTTCEEEECTTCCEEEEESSSEE
T ss_pred CCEEEEecCCCEEEECCCCcEEEEeCCCEE
Confidence 445678889999999999999999976554
No 245
>1wys_A Riken cDNA 2310008M20 protein; ZF-AN1 domain, zinc binding, NPPSFA, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=21.80 E-value=68 Score=28.38 Aligned_cols=35 Identities=29% Similarity=0.483 Sum_probs=28.1
Q ss_pred CcCCCCccc--ccccCCCCeEEcCcCCCccccHhHHhhhcCC
Q 002177 190 DTGGQICHQ--CRRNDRERVVWCVKCDKRGYCDSCISTWYSD 229 (956)
Q Consensus 190 ~~~~~~CHQ--Crqkt~~~~v~C~~C~r~~FC~~CL~~rY~e 229 (956)
-..++.|.- |++++. ..+.|..|+ +.||. .-||++
T Consensus 11 ~~~g~~Cs~~~C~~~df-lpf~C~~C~-~~FC~---~HR~~e 47 (75)
T 1wys_A 11 LDIGQHCQVQHCRQRDF-LPFVCDGCS-GIFCL---EHRSKD 47 (75)
T ss_dssp CCCCCCCSCTTTCCCSC-CCEECTTTC-CEECS---TTCSSG
T ss_pred cccCCCcCcccCCCccc-eeeECcccC-cCcCc---ccCCcc
Confidence 357899999 999986 477899999 58985 667765
No 246
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=20.90 E-value=37 Score=28.88 Aligned_cols=47 Identities=15% Similarity=0.403 Sum_probs=32.9
Q ss_pred cCCCCcccccccC--CCCeEEcC-cCCCccccHhHHhhhcCCCchhh---------hhhcCCCCC
Q 002177 191 TGGQICHQCRRND--RERVVWCV-KCDKRGYCDSCISTWYSDIPLEE---------LEKVCPACR 243 (956)
Q Consensus 191 ~~~~~CHQCrqkt--~~~~v~C~-~C~r~~FC~~CL~~rY~e~~~ed---------v~~~CP~Cr 243 (956)
.....|--|++.- ....+.|- .|+ .-|=..|+ .++.+. ..|.||.|.
T Consensus 6 ~~~~~C~~C~~p~~~~~~mI~CD~~C~-~WfH~~Cv-----glt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVNDDQDAILCEASCQ-KWFHRICT-----GMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCCTTSCEEEBTTTTC-CEEEHHHH-----TCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccCCCCCeEecccCcc-ccCchhcc-----CCCHHHHHHhhccCCCcEECcCcc
Confidence 3456788999863 44699999 999 47888887 355432 279999885
No 247
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.84 E-value=74 Score=26.43 Aligned_cols=14 Identities=21% Similarity=0.657 Sum_probs=11.3
Q ss_pred ccccHhHHhhhcCC
Q 002177 216 RGYCDSCISTWYSD 229 (956)
Q Consensus 216 ~~FC~~CL~~rY~e 229 (956)
..||..|..++|+.
T Consensus 60 ~~yC~~~y~~~f~~ 73 (77)
T 1g47_A 60 RKYCEHDFQMLFAP 73 (77)
T ss_dssp EEECHHHHHHHCCC
T ss_pred eEeCHHHHHHHhhc
Confidence 35899999888874
No 248
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=20.78 E-value=67 Score=26.45 Aligned_cols=32 Identities=25% Similarity=0.717 Sum_probs=24.6
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccH-hHHhh
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCD-SCIST 225 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~-~CL~~ 225 (956)
.....|+.|.+. ....|+.|+.-.||. .|-..
T Consensus 13 ~~~~~C~~C~~~---~~~~Cs~C~~v~YCs~~CQ~~ 45 (60)
T 2dj8_A 13 DSSESCWNCGRK---ASETCSGCNTARYCGSFCQHK 45 (60)
T ss_dssp CCSCCCSSSCSC---CCEECTTTSCCEESSHHHHHH
T ss_pred CCCcccccCCCC---CcccCCCCCCEeeeCHHHHHH
Confidence 356799999973 467999999888995 56544
No 249
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=20.57 E-value=44 Score=27.75 Aligned_cols=32 Identities=25% Similarity=0.717 Sum_probs=24.9
Q ss_pred cCCCCcccccccCCCCeEEcCcCCCccccH-hHHhh
Q 002177 191 TGGQICHQCRRNDRERVVWCVKCDKRGYCD-SCIST 225 (956)
Q Consensus 191 ~~~~~CHQCrqkt~~~~v~C~~C~r~~FC~-~CL~~ 225 (956)
.....|+.|... ....|+.|+.-.||. .|-..
T Consensus 15 ~~~~~C~~C~~~---~~~~Cs~C~~~~YCs~~CQ~~ 47 (64)
T 2odd_A 15 DSSESCWNCGRK---ASETCSGCNTARYCGSFCQHK 47 (64)
T ss_dssp CCSSSCTTTSSC---CCEEETTTSCCEESSHHHHHH
T ss_pred CCCCcCccccCC---CcccCCCCCChhhCCHHHHHH
Confidence 467899999973 467999999888996 56544
No 250
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=20.53 E-value=80 Score=33.00 Aligned_cols=48 Identities=21% Similarity=0.509 Sum_probs=36.7
Q ss_pred CCCCcccccccCCCCeEEcCcCCCccccHhHHhhhcCCCchhhhhhcCCCCCCc
Q 002177 192 GGQICHQCRRNDRERVVWCVKCDKRGYCDSCISTWYSDIPLEELEKVCPACRGS 245 (956)
Q Consensus 192 ~~~~CHQCrqkt~~~~v~C~~C~r~~FC~~CL~~rY~e~~~edv~~~CP~Crg~ 245 (956)
.-..|..|+.--. .-..|.+|+ .+|=..|+.+|.... ..-.||.|...
T Consensus 179 ~i~~C~iC~~iv~-~g~~C~~C~-~~~H~~C~~~~~~~~----~~~~CP~C~~~ 226 (238)
T 3nw0_A 179 AVKICNICHSLLI-QGQSCETCG-IRMHLPCVAKYFQSN----AEPRCPHCNDY 226 (238)
T ss_dssp TCCBCTTTCSBCS-SCEECSSSC-CEECHHHHHHHTTTC----SSCBCTTTCCB
T ss_pred CCCcCcchhhHHh-CCcccCccC-hHHHHHHHHHHHHhC----CCCCCCCCCCC
Confidence 3678999997665 357999999 589999999998642 24579988763
No 251
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=20.19 E-value=25 Score=32.45 Aligned_cols=45 Identities=20% Similarity=0.575 Sum_probs=32.6
Q ss_pred CCccccccc--CCCCeEEcC-cCCCccccHhHHhhhcCCCchhh---------hhhcCCCCCC
Q 002177 194 QICHQCRRN--DRERVVWCV-KCDKRGYCDSCISTWYSDIPLEE---------LEKVCPACRG 244 (956)
Q Consensus 194 ~~CHQCrqk--t~~~~v~C~-~C~r~~FC~~CL~~rY~e~~~ed---------v~~~CP~Crg 244 (956)
..|.-|++. +.+..+.|- .|+ .-|=..|+ .++.+. ..|.||.|+.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cdd~C~-~WfH~~CV-----glt~~~~~~i~~~~~~~~~Cp~C~~ 60 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCEASCQ-KWFHRECT-----GMTESAYGLLTTEASAVWACDLCLK 60 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECTTTTC-CEEEGGGT-----TCCHHHHHHHHHCTTEEECCHHHHH
T ss_pred CCCCCCCCccCCCCCEEEecCCcc-cccccccC-----CcCHHHHHhhccCCCCCEECccccC
Confidence 468889988 456789997 898 46777776 345422 4699999875
Done!