Query 002178
Match_columns 956
No_of_seqs 924 out of 7134
Neff 8.8
Searched_HMMs 46136
Date Thu Mar 28 18:17:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002178.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002178hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.9E-75 6.3E-80 743.3 62.2 259 623-902 689-955 (968)
2 KOG1187 Serine/threonine prote 100.0 9.9E-50 2.2E-54 442.8 27.9 284 610-899 61-353 (361)
3 KOG0615 Serine/threonine prote 100.0 2.9E-47 6.2E-52 398.6 13.2 262 622-942 170-446 (475)
4 KOG0192 Tyrosine kinase specif 100.0 6.1E-45 1.3E-49 401.1 25.2 259 628-904 45-309 (362)
5 KOG0581 Mitogen-activated prot 100.0 1.4E-45 3.1E-50 384.6 18.8 244 626-889 81-330 (364)
6 KOG0659 Cdk activating kinase 100.0 4.3E-46 9.4E-51 369.0 13.6 283 624-941 2-289 (318)
7 KOG0575 Polo-like serine/threo 100.0 1.9E-45 4.1E-50 404.8 18.7 251 624-936 18-272 (592)
8 KOG0661 MAPK related serine/th 100.0 2.7E-46 6E-51 397.9 10.4 288 622-942 8-300 (538)
9 KOG0197 Tyrosine kinases [Sign 100.0 4.1E-45 8.9E-50 399.1 16.1 259 622-900 204-463 (468)
10 KOG0593 Predicted protein kina 100.0 3.6E-45 7.7E-50 367.9 10.2 282 624-938 2-289 (396)
11 KOG0595 Serine/threonine-prote 100.0 6.4E-44 1.4E-48 374.7 19.1 269 623-932 9-286 (429)
12 KOG0600 Cdc2-related protein k 100.0 3E-44 6.4E-49 385.1 14.2 287 623-941 116-408 (560)
13 KOG0598 Ribosomal protein S6 k 100.0 1E-43 2.2E-48 370.8 15.2 257 622-940 23-288 (357)
14 KOG0591 NIMA (never in mitosis 100.0 4.9E-44 1.1E-48 356.2 11.2 257 624-897 19-284 (375)
15 KOG0660 Mitogen-activated prot 100.0 4.1E-43 8.8E-48 364.7 14.6 286 622-938 20-315 (359)
16 KOG0663 Protein kinase PITSLRE 100.0 6.4E-43 1.4E-47 356.4 14.6 286 624-941 76-369 (419)
17 KOG1026 Nerve growth factor re 100.0 9.7E-43 2.1E-47 398.0 16.8 262 623-902 485-766 (774)
18 KOG0592 3-phosphoinositide-dep 100.0 8.6E-42 1.9E-46 369.1 15.9 264 623-941 72-346 (604)
19 KOG0578 p21-activated serine/t 100.0 7.9E-42 1.7E-46 373.4 14.6 264 624-947 273-537 (550)
20 KOG0616 cAMP-dependent protein 100.0 3E-41 6.5E-46 339.4 16.1 199 624-837 44-246 (355)
21 KOG0597 Serine-threonine prote 100.0 3.2E-41 7E-46 363.6 14.4 256 624-942 2-260 (808)
22 KOG0667 Dual-specificity tyros 100.0 3.7E-41 8E-46 375.6 15.4 291 625-941 187-510 (586)
23 KOG0193 Serine/threonine prote 100.0 8E-41 1.7E-45 365.8 17.7 268 615-904 383-659 (678)
24 KOG0582 Ste20-like serine/thre 100.0 1.7E-40 3.7E-45 351.0 18.9 274 622-941 24-301 (516)
25 KOG0196 Tyrosine kinase, EPH ( 100.0 2E-41 4.3E-46 378.0 12.1 270 613-900 609-893 (996)
26 KOG0594 Protein kinase PCTAIRE 100.0 5.3E-41 1.2E-45 350.9 14.2 294 623-947 10-316 (323)
27 KOG0583 Serine/threonine prote 100.0 2.6E-40 5.6E-45 368.2 19.5 255 621-938 14-280 (370)
28 KOG0605 NDR and related serine 100.0 5.2E-40 1.1E-44 356.1 18.3 269 621-941 138-453 (550)
29 KOG0198 MEKK and related serin 100.0 7.8E-40 1.7E-44 349.2 19.0 203 624-834 17-224 (313)
30 KOG0033 Ca2+/calmodulin-depend 100.0 1.6E-41 3.4E-46 331.6 4.2 259 622-939 9-273 (355)
31 KOG0658 Glycogen synthase kina 100.0 8.2E-41 1.8E-45 348.1 9.8 275 625-938 25-311 (364)
32 PHA03212 serine/threonine kina 100.0 1.2E-39 2.6E-44 371.3 19.1 282 623-939 91-382 (391)
33 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1E-39 2.2E-44 358.0 17.7 281 624-936 5-288 (288)
34 KOG0588 Serine/threonine prote 100.0 4.8E-40 1E-44 362.3 15.0 255 625-942 13-272 (786)
35 cd05631 STKc_GRK4 Catalytic do 100.0 3.5E-39 7.7E-44 353.1 21.8 200 625-835 1-204 (285)
36 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.9E-39 8.5E-44 361.9 22.5 263 621-900 4-336 (338)
37 KOG0580 Serine/threonine prote 100.0 1.9E-40 4E-45 324.6 9.2 254 623-939 21-279 (281)
38 KOG0666 Cyclin C-dependent kin 100.0 2.3E-40 4.9E-45 333.9 8.8 298 622-941 22-345 (438)
39 KOG4721 Serine/threonine prote 100.0 6.2E-40 1.3E-44 353.1 12.2 239 629-898 129-368 (904)
40 KOG1095 Protein tyrosine kinas 100.0 3E-39 6.5E-44 382.8 18.1 261 623-901 691-964 (1025)
41 cd07862 STKc_CDK6 Catalytic do 100.0 6.4E-39 1.4E-43 352.1 19.5 278 624-936 1-290 (290)
42 cd07848 STKc_CDKL5 Catalytic d 100.0 6.2E-39 1.3E-43 351.6 19.2 284 624-936 1-287 (287)
43 cd05612 STKc_PRKX_like Catalyt 100.0 3.6E-39 7.7E-44 354.2 16.0 197 624-835 1-201 (291)
44 KOG0194 Protein tyrosine kinas 100.0 5.4E-39 1.2E-43 357.4 17.4 269 614-903 147-425 (474)
45 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.6E-39 1.6E-43 353.8 18.4 286 623-939 4-294 (303)
46 KOG0610 Putative serine/threon 100.0 6.7E-39 1.5E-43 336.7 16.9 279 624-955 77-412 (459)
47 PTZ00263 protein kinase A cata 100.0 1.1E-38 2.3E-43 356.6 19.6 198 624-836 18-219 (329)
48 PTZ00426 cAMP-dependent protei 100.0 1.3E-38 2.8E-43 356.7 19.1 199 623-836 29-232 (340)
49 KOG1094 Discoidin domain recep 100.0 2.1E-38 4.6E-43 343.1 19.2 261 622-897 536-803 (807)
50 cd06650 PKc_MEK1 Catalytic dom 100.0 1.4E-38 3.1E-43 356.0 18.5 296 622-941 3-307 (333)
51 KOG0585 Ca2+/calmodulin-depend 100.0 1.1E-38 2.4E-43 339.1 16.4 267 620-942 93-381 (576)
52 KOG0694 Serine/threonine prote 100.0 1.2E-38 2.5E-43 354.9 16.1 242 620-885 364-610 (694)
53 cd06649 PKc_MEK2 Catalytic dom 100.0 2.4E-38 5.2E-43 354.2 18.8 298 623-941 4-309 (331)
54 cd05571 STKc_PKB Catalytic dom 100.0 3E-38 6.6E-43 352.1 18.3 194 630-835 1-198 (323)
55 KOG0599 Phosphorylase kinase g 100.0 1.8E-39 4E-44 321.5 7.4 256 623-937 16-287 (411)
56 PHA02988 hypothetical protein; 100.0 2.7E-37 5.8E-42 337.6 25.3 261 610-900 11-281 (283)
57 cd07853 STKc_NLK Catalytic dom 100.0 6.9E-38 1.5E-42 356.4 21.4 285 625-939 1-294 (372)
58 cd05585 STKc_YPK1_like Catalyt 100.0 3.2E-38 7E-43 350.2 18.1 192 632-835 1-196 (312)
59 PTZ00284 protein kinase; Provi 100.0 2.8E-38 6E-43 370.0 18.5 294 618-941 123-446 (467)
60 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.5E-38 1.4E-42 352.1 19.3 287 625-941 1-298 (338)
61 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 4.4E-38 9.6E-43 352.5 17.1 197 624-835 1-201 (333)
62 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-37 3E-42 340.5 20.6 200 625-835 1-204 (285)
63 KOG0611 Predicted serine/threo 100.0 1.3E-38 2.9E-43 330.4 11.7 200 623-835 52-256 (668)
64 cd07868 STKc_CDK8 Catalytic do 100.0 7.9E-38 1.7E-42 348.1 18.5 289 629-936 6-317 (317)
65 cd05608 STKc_GRK1 Catalytic do 100.0 1.2E-37 2.6E-42 340.2 19.4 194 632-835 1-200 (280)
66 cd05595 STKc_PKB_beta Catalyti 100.0 9.1E-38 2E-42 348.1 18.6 234 630-886 1-238 (323)
67 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-37 3E-42 345.8 19.9 262 622-943 33-303 (382)
68 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-37 3.1E-42 347.2 20.0 240 630-892 1-249 (328)
69 PHA03211 serine/threonine kina 100.0 1E-37 2.2E-42 359.4 18.7 286 622-938 167-460 (461)
70 KOG0589 Serine/threonine prote 100.0 1.1E-37 2.5E-42 340.1 17.9 251 624-894 4-258 (426)
71 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-37 3.2E-42 344.6 19.1 287 624-942 6-295 (309)
72 cd07876 STKc_JNK2 Catalytic do 100.0 2.3E-37 5E-42 350.4 21.0 290 622-938 19-320 (359)
73 cd05096 PTKc_DDR1 Catalytic do 100.0 5.2E-37 1.1E-41 339.3 23.4 261 623-896 4-303 (304)
74 cd05599 STKc_NDR_like Catalyti 100.0 7.2E-38 1.6E-42 355.4 16.8 208 624-836 1-243 (364)
75 cd05621 STKc_ROCK2 Catalytic d 100.0 2.9E-37 6.4E-42 349.7 21.7 205 620-836 39-251 (370)
76 KOG2345 Serine/threonine prote 100.0 4.2E-38 9E-43 309.3 12.5 269 621-898 18-300 (302)
77 cd05104 PTKc_Kit Catalytic dom 100.0 4.2E-37 9.2E-42 349.5 22.3 260 621-897 32-373 (375)
78 cd05584 STKc_p70S6K Catalytic 100.0 1.5E-37 3.3E-42 346.5 18.3 195 630-836 2-204 (323)
79 cd05614 STKc_MSK2_N N-terminal 100.0 1.6E-37 3.4E-42 347.9 18.5 199 625-834 1-209 (332)
80 PF07714 Pkinase_Tyr: Protein 100.0 1.4E-37 2.9E-42 335.5 17.2 250 628-895 3-259 (259)
81 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-37 3.6E-42 345.6 18.3 194 630-835 1-199 (320)
82 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-37 2.5E-42 353.4 17.1 204 621-836 40-251 (370)
83 KOG4278 Protein tyrosine kinas 100.0 7.3E-38 1.6E-42 339.3 14.3 264 616-900 259-525 (1157)
84 cd05629 STKc_NDR_like_fungal C 100.0 3.3E-37 7.1E-42 351.5 20.5 208 624-836 1-252 (377)
85 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-37 4.6E-42 351.0 18.7 208 624-836 1-240 (363)
86 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.9E-37 1.1E-41 332.7 20.6 256 623-898 4-265 (266)
87 cd05106 PTKc_CSF-1R Catalytic 100.0 4.9E-37 1.1E-41 348.7 21.5 264 619-899 33-373 (374)
88 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.2E-37 2.7E-42 351.6 16.0 208 624-836 1-234 (350)
89 cd05626 STKc_LATS2 Catalytic d 100.0 3.1E-37 6.7E-42 352.0 19.3 207 625-836 2-252 (381)
90 cd05594 STKc_PKB_alpha Catalyt 100.0 1.7E-37 3.7E-42 346.4 16.7 234 630-886 1-239 (325)
91 cd07875 STKc_JNK1 Catalytic do 100.0 4.3E-37 9.4E-42 348.8 20.1 290 622-938 22-323 (364)
92 KOG0201 Serine/threonine prote 100.0 3.7E-38 8E-43 333.7 10.3 250 623-894 12-263 (467)
93 cd05072 PTKc_Lyn Catalytic dom 100.0 6.5E-37 1.4E-41 330.7 20.3 256 622-897 4-260 (261)
94 cd05618 STKc_aPKC_iota Catalyt 100.0 3.6E-37 7.8E-42 344.1 18.7 192 630-833 1-197 (329)
95 cd05588 STKc_aPKC Catalytic do 100.0 3.6E-37 7.8E-42 344.2 18.5 192 630-833 1-197 (329)
96 cd05625 STKc_LATS1 Catalytic d 100.0 2.8E-37 6.1E-42 352.6 17.8 207 625-836 2-252 (382)
97 KOG0662 Cyclin-dependent kinas 100.0 7.7E-38 1.7E-42 291.8 10.6 284 625-940 3-290 (292)
98 cd05587 STKc_cPKC Catalytic do 100.0 5.5E-37 1.2E-41 342.2 19.5 200 625-836 1-205 (324)
99 PHA03209 serine/threonine kina 100.0 2.4E-37 5.2E-42 349.5 16.7 289 621-938 63-356 (357)
100 KOG1989 ARK protein kinase fam 100.0 3.3E-37 7.2E-42 354.8 17.9 265 622-901 35-314 (738)
101 cd05048 PTKc_Ror Catalytic Dom 100.0 1.2E-36 2.6E-41 332.8 21.5 256 624-897 5-282 (283)
102 cd05601 STKc_CRIK Catalytic do 100.0 2.1E-37 4.6E-42 346.6 15.9 203 624-836 1-213 (330)
103 PLN00034 mitogen-activated pro 100.0 4.4E-37 9.5E-42 347.2 18.5 256 625-942 75-337 (353)
104 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.2E-36 2.7E-41 327.5 21.1 251 624-895 4-255 (256)
105 cd05589 STKc_PKN Catalytic dom 100.0 3.8E-37 8.3E-42 343.5 17.2 239 626-888 1-246 (324)
106 cd07863 STKc_CDK4 Catalytic do 100.0 4.7E-37 1E-41 336.9 17.6 277 625-936 1-288 (288)
107 PTZ00036 glycogen synthase kin 100.0 5E-37 1.1E-41 355.3 18.5 279 623-939 65-357 (440)
108 cd05148 PTKc_Srm_Brk Catalytic 100.0 6.6E-37 1.4E-41 330.5 18.1 256 622-897 4-260 (261)
109 PHA03207 serine/threonine kina 100.0 5.3E-37 1.2E-41 351.0 18.1 287 623-940 91-382 (392)
110 cd05591 STKc_nPKC_epsilon Cata 100.0 5.6E-37 1.2E-41 341.7 17.5 195 630-836 1-200 (321)
111 cd05622 STKc_ROCK1 Catalytic d 100.0 1.4E-36 3E-41 344.5 20.9 209 616-836 35-251 (371)
112 cd05598 STKc_LATS Catalytic do 100.0 2.6E-37 5.6E-42 352.3 15.0 208 624-836 1-248 (376)
113 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.6E-36 7.9E-41 342.9 24.4 262 621-899 34-398 (400)
114 cd07874 STKc_JNK3 Catalytic do 100.0 9E-37 2E-41 345.1 19.3 292 621-939 14-317 (355)
115 KOG3653 Transforming growth fa 100.0 1.2E-35 2.5E-40 316.6 26.3 268 624-903 210-508 (534)
116 cd05592 STKc_nPKC_theta_delta 100.0 1.2E-36 2.7E-41 337.9 19.6 280 630-941 1-286 (316)
117 cd05068 PTKc_Frk_like Catalyti 100.0 1.9E-36 4.1E-41 327.1 20.5 256 622-897 4-260 (261)
118 cd05049 PTKc_Trk Catalytic dom 100.0 1.9E-36 4.1E-41 330.5 20.7 256 623-896 4-279 (280)
119 KOG4257 Focal adhesion tyrosin 100.0 5.4E-37 1.2E-41 333.7 16.0 261 619-900 384-651 (974)
120 cd05094 PTKc_TrkC Catalytic do 100.0 3.2E-36 6.9E-41 330.9 22.4 260 624-901 5-285 (291)
121 PTZ00267 NIMA-related protein 100.0 1.9E-36 4.2E-41 354.5 21.9 251 625-893 68-322 (478)
122 cd05619 STKc_nPKC_theta Cataly 100.0 1.3E-36 2.9E-41 337.5 19.5 279 630-940 1-285 (316)
123 cd05052 PTKc_Abl Catalytic dom 100.0 2.9E-36 6.3E-41 326.0 21.4 255 624-898 6-262 (263)
124 cd05093 PTKc_TrkB Catalytic do 100.0 3.4E-36 7.4E-41 330.1 22.3 261 623-901 4-282 (288)
125 cd05630 STKc_GRK6 Catalytic do 100.0 1.4E-36 3.1E-41 332.5 19.1 257 625-938 1-266 (285)
126 KOG2052 Activin A type IB rece 100.0 5.2E-36 1.1E-40 316.9 22.4 261 623-900 210-505 (513)
127 cd05575 STKc_SGK Catalytic dom 100.0 9E-37 2E-41 340.3 17.6 194 630-835 1-199 (323)
128 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-36 2.5E-41 338.2 18.3 194 630-835 1-199 (316)
129 KOG0607 MAP kinase-interacting 100.0 1.2E-36 2.6E-41 307.9 16.2 283 614-942 73-370 (463)
130 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-36 4E-41 340.9 19.5 281 621-938 12-303 (343)
131 cd05062 PTKc_IGF-1R Catalytic 100.0 2.5E-36 5.4E-41 329.2 20.0 258 621-896 3-276 (277)
132 cd05616 STKc_cPKC_beta Catalyt 100.0 2.1E-36 4.6E-41 337.3 19.6 241 625-888 1-246 (323)
133 cd05632 STKc_GRK5 Catalytic do 100.0 3.5E-36 7.5E-41 329.5 20.7 200 626-836 2-205 (285)
134 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.5E-36 9.7E-41 324.0 21.2 254 623-897 5-259 (260)
135 cd05054 PTKc_VEGFR Catalytic d 100.0 4.6E-36 1E-40 336.0 21.8 262 621-899 4-334 (337)
136 cd05033 PTKc_EphR Catalytic do 100.0 8E-36 1.7E-40 323.1 23.0 257 623-898 3-265 (266)
137 cd05071 PTKc_Src Catalytic dom 100.0 6.2E-36 1.3E-40 323.3 21.8 256 623-899 5-261 (262)
138 cd05582 STKc_RSK_N N-terminal 100.0 6.6E-37 1.4E-41 340.7 14.6 238 630-890 2-245 (318)
139 cd07867 STKc_CDC2L6 Catalytic 100.0 3.2E-36 6.9E-41 335.2 20.0 197 629-835 6-219 (317)
140 cd05113 PTKc_Btk_Bmx Catalytic 100.0 4.2E-36 9E-41 323.4 20.1 252 624-896 4-256 (256)
141 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.7E-36 5.8E-41 336.9 19.3 193 630-834 1-198 (327)
142 cd05627 STKc_NDR2 Catalytic do 100.0 9.9E-37 2.1E-41 345.3 16.0 208 624-836 1-240 (360)
143 cd05090 PTKc_Ror1 Catalytic do 100.0 5.9E-36 1.3E-40 327.4 21.5 256 624-897 5-282 (283)
144 cd05597 STKc_DMPK_like Catalyt 100.0 2.3E-36 5E-41 338.0 18.6 202 624-835 1-211 (331)
145 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-36 5E-41 336.2 18.2 195 630-836 1-200 (318)
146 cd06615 PKc_MEK Catalytic doma 100.0 6.2E-36 1.3E-40 331.3 21.4 284 624-939 1-293 (308)
147 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.7E-36 5.9E-41 333.1 18.3 285 624-940 6-293 (301)
148 cd05604 STKc_SGK3 Catalytic do 100.0 1.6E-36 3.5E-41 338.5 16.6 194 630-835 1-199 (325)
149 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.2E-35 2.6E-40 320.6 22.5 255 622-897 4-259 (260)
150 cd08227 PK_STRAD_alpha Pseudok 100.0 3.1E-36 6.7E-41 336.7 18.2 206 628-836 2-214 (327)
151 cd05108 PTKc_EGFR Catalytic do 100.0 9.7E-36 2.1E-40 331.1 21.8 258 623-900 6-270 (316)
152 KOG0671 LAMMER dual specificit 100.0 1.4E-37 2.9E-42 324.0 6.3 291 622-939 87-412 (415)
153 cd07839 STKc_CDK5 Catalytic do 100.0 3.4E-36 7.3E-41 329.4 17.4 280 625-936 1-284 (284)
154 cd05615 STKc_cPKC_alpha Cataly 100.0 5.1E-36 1.1E-40 334.0 19.0 241 625-888 1-246 (323)
155 cd05053 PTKc_FGFR Catalytic do 100.0 1E-35 2.2E-40 327.2 21.0 263 619-899 7-292 (293)
156 PTZ00283 serine/threonine prot 100.0 9.9E-36 2.1E-40 348.5 22.1 256 621-894 29-297 (496)
157 cd08529 STKc_FA2-like Catalyti 100.0 2E-35 4.3E-40 317.9 22.7 249 625-893 1-252 (256)
158 cd05059 PTKc_Tec_like Catalyti 100.0 1.7E-35 3.8E-40 318.6 22.1 251 624-895 4-255 (256)
159 cd05091 PTKc_Ror2 Catalytic do 100.0 6.5E-36 1.4E-40 327.0 19.0 255 625-897 6-282 (283)
160 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-35 2.4E-40 326.5 20.7 282 624-936 5-291 (291)
161 cd07860 STKc_CDK2_3 Catalytic 100.0 1E-35 2.2E-40 325.6 20.3 279 625-936 1-284 (284)
162 cd07832 STKc_CCRK Catalytic do 100.0 7.6E-36 1.7E-40 326.8 19.0 282 625-937 1-286 (286)
163 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-35 3E-40 332.0 21.5 203 624-836 1-212 (332)
164 cd05069 PTKc_Yes Catalytic dom 100.0 3.2E-35 7E-40 317.3 23.6 253 624-897 6-259 (260)
165 cd05603 STKc_SGK2 Catalytic do 100.0 4.8E-36 1E-40 334.2 17.6 237 630-889 1-242 (321)
166 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.2E-35 4.9E-40 327.8 22.9 280 622-922 10-314 (314)
167 cd08228 STKc_Nek6 Catalytic do 100.0 3.8E-35 8.3E-40 317.9 24.1 257 624-898 2-265 (267)
168 cd05034 PTKc_Src_like Catalyti 100.0 1.5E-35 3.3E-40 319.9 20.5 257 621-897 3-260 (261)
169 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-35 3.3E-40 326.2 20.7 269 624-952 19-288 (296)
170 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-35 2.3E-40 325.5 19.3 279 625-936 1-285 (285)
171 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.8E-35 6.1E-40 335.3 23.4 264 618-898 31-399 (401)
172 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-35 3.5E-40 323.3 20.5 255 624-896 5-279 (280)
173 cd05602 STKc_SGK1 Catalytic do 100.0 7.3E-36 1.6E-40 333.3 18.1 241 630-893 1-246 (325)
174 KOG1025 Epidermal growth facto 100.0 3.3E-36 7.1E-41 337.0 15.1 255 626-900 698-959 (1177)
175 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 7.4E-35 1.6E-39 315.5 25.3 258 624-899 2-266 (267)
176 cd05035 PTKc_Axl_like Catalyti 100.0 4.1E-35 8.9E-40 318.6 23.3 255 626-898 1-272 (273)
177 cd05061 PTKc_InsR Catalytic do 100.0 2E-35 4.3E-40 324.1 20.8 260 621-898 3-278 (288)
178 cd05607 STKc_GRK7 Catalytic do 100.0 2.4E-35 5.1E-40 321.5 21.1 192 632-834 1-196 (277)
179 cd05036 PTKc_ALK_LTK Catalytic 100.0 2E-35 4.4E-40 322.0 20.5 257 622-896 4-276 (277)
180 cd05624 STKc_MRCK_beta Catalyt 100.0 2E-35 4.3E-40 330.5 20.8 254 624-893 1-265 (331)
181 cd06619 PKc_MKK5 Catalytic dom 100.0 1.5E-35 3.4E-40 323.3 19.3 260 624-943 1-263 (279)
182 cd05089 PTKc_Tie1 Catalytic do 100.0 3E-35 6.6E-40 324.1 21.8 257 624-901 2-278 (297)
183 cd05032 PTKc_InsR_like Catalyt 100.0 1.7E-35 3.8E-40 322.4 19.6 257 622-896 4-276 (277)
184 cd05111 PTK_HER3 Pseudokinase 100.0 4.1E-35 9E-40 319.9 22.6 257 624-900 7-270 (279)
185 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.2E-35 9.2E-40 320.6 22.6 266 624-899 3-282 (283)
186 cd05043 PTK_Ryk Pseudokinase d 100.0 4.4E-35 9.6E-40 319.9 22.5 261 622-900 4-278 (280)
187 KOG0199 ACK and related non-re 100.0 3.5E-36 7.5E-41 331.4 13.5 251 627-895 113-369 (1039)
188 cd05116 PTKc_Syk Catalytic dom 100.0 3.9E-35 8.4E-40 316.1 21.5 248 631-898 2-255 (257)
189 cd05039 PTKc_Csk_like Catalyti 100.0 4.8E-35 1E-39 315.1 22.2 250 623-897 5-255 (256)
190 cd07870 STKc_PFTAIRE2 Catalyti 100.0 3.1E-35 6.6E-40 323.1 20.8 283 622-936 3-291 (291)
191 KOG0986 G protein-coupled rece 100.0 1.4E-36 3E-41 320.9 9.6 204 621-835 182-389 (591)
192 cd05055 PTKc_PDGFR Catalytic d 100.0 5.3E-35 1.2E-39 322.8 22.7 261 621-898 32-301 (302)
193 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.3E-35 7.1E-40 325.0 21.0 263 621-901 12-299 (304)
194 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.9E-35 8.5E-40 324.8 21.6 261 623-901 17-302 (307)
195 cd08219 STKc_Nek3 Catalytic do 100.0 3.8E-35 8.3E-40 315.7 20.8 250 625-894 1-252 (255)
196 PRK13184 pknD serine/threonine 100.0 5.2E-35 1.1E-39 350.1 24.0 270 624-904 2-296 (932)
197 cd05084 PTKc_Fes Catalytic dom 100.0 7E-35 1.5E-39 313.0 22.7 248 630-896 1-251 (252)
198 cd05045 PTKc_RET Catalytic dom 100.0 6.1E-35 1.3E-39 320.5 22.5 258 625-900 1-288 (290)
199 KOG0584 Serine/threonine prote 100.0 2.8E-36 6.2E-41 332.8 11.8 250 629-939 45-302 (632)
200 cd05115 PTKc_Zap-70 Catalytic 100.0 6.7E-35 1.5E-39 314.2 22.4 249 631-898 2-255 (257)
201 cd05073 PTKc_Hck Catalytic dom 100.0 5.2E-35 1.1E-39 315.7 21.4 255 622-897 4-259 (260)
202 KOG4279 Serine/threonine prote 100.0 6.9E-36 1.5E-40 327.9 14.6 245 630-893 581-831 (1226)
203 cd05082 PTKc_Csk Catalytic dom 100.0 5.8E-35 1.3E-39 314.5 21.5 249 623-897 5-255 (256)
204 cd08229 STKc_Nek7 Catalytic do 100.0 9.3E-35 2E-39 314.9 23.0 257 624-898 2-265 (267)
205 cd05103 PTKc_VEGFR2 Catalytic 100.0 6E-35 1.3E-39 328.3 22.1 262 622-900 5-341 (343)
206 cd07850 STKc_JNK Catalytic dom 100.0 2.2E-35 4.9E-40 333.3 18.8 290 622-938 14-316 (353)
207 cd05088 PTKc_Tie2 Catalytic do 100.0 5.4E-35 1.2E-39 323.0 21.3 257 623-900 6-282 (303)
208 KOG4717 Serine/threonine prote 100.0 4.5E-36 9.8E-41 319.8 12.1 256 624-941 18-278 (864)
209 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6.8E-35 1.5E-39 319.1 21.9 267 624-898 4-283 (284)
210 cd05050 PTKc_Musk Catalytic do 100.0 4.5E-35 9.7E-40 321.3 20.4 257 622-896 3-287 (288)
211 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.9E-35 1.7E-39 315.7 22.1 258 623-898 4-267 (268)
212 cd05586 STKc_Sck1_like Catalyt 100.0 6.7E-36 1.5E-40 334.4 14.0 235 632-888 1-243 (330)
213 KOG0577 Serine/threonine prote 100.0 5.1E-36 1.1E-40 324.2 12.4 244 625-894 27-278 (948)
214 cd05110 PTKc_HER4 Catalytic do 100.0 7E-35 1.5E-39 322.1 21.8 288 623-941 6-300 (303)
215 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-34 3.1E-39 314.4 23.8 255 626-898 1-271 (272)
216 cd06646 STKc_MAP4K5 Catalytic 100.0 6.8E-35 1.5E-39 316.0 20.9 201 623-835 8-212 (267)
217 cd05085 PTKc_Fer Catalytic dom 100.0 1.1E-34 2.3E-39 311.2 22.0 247 630-896 1-249 (250)
218 KOG0604 MAP kinase-activated p 100.0 5.3E-36 1.2E-40 301.2 11.0 261 623-941 60-330 (400)
219 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.6E-34 3.4E-39 323.9 24.3 265 619-901 7-296 (334)
220 cd06625 STKc_MEKK3_like Cataly 100.0 2E-34 4.2E-39 311.5 24.2 204 624-836 2-211 (263)
221 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.9E-35 4.2E-40 323.6 16.4 279 624-936 1-286 (286)
222 cd07841 STKc_CDK7 Catalytic do 100.0 2.3E-35 5.1E-40 325.2 17.0 283 625-941 1-290 (298)
223 cd07842 STKc_CDK8_like Catalyt 100.0 3.5E-35 7.7E-40 326.5 18.6 284 625-936 1-316 (316)
224 PF00069 Pkinase: Protein kina 100.0 1.2E-35 2.7E-40 320.2 14.4 198 626-835 1-202 (260)
225 cd06654 STKc_PAK1 Catalytic do 100.0 1.3E-34 2.8E-39 318.8 22.8 200 624-836 20-220 (296)
226 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.1E-35 2.4E-40 325.6 14.2 280 624-936 1-286 (286)
227 cd05097 PTKc_DDR_like Catalyti 100.0 1.1E-34 2.4E-39 319.3 22.2 261 623-896 4-294 (295)
228 PHA03210 serine/threonine kina 100.0 1.3E-35 2.8E-40 348.6 15.5 291 622-941 146-462 (501)
229 cd07843 STKc_CDC2L1 Catalytic 100.0 3E-35 6.6E-40 323.4 17.4 281 624-936 5-293 (293)
230 cd05574 STKc_phototropin_like 100.0 5E-35 1.1E-39 325.4 19.2 267 624-941 1-297 (316)
231 cd05066 PTKc_EphR_A Catalytic 100.0 1.2E-34 2.5E-39 314.2 21.6 258 623-898 3-266 (267)
232 cd06658 STKc_PAK5 Catalytic do 100.0 3.8E-35 8.2E-40 322.3 17.9 261 626-946 24-285 (292)
233 cd05051 PTKc_DDR Catalytic dom 100.0 1.7E-34 3.7E-39 317.9 23.1 262 623-896 4-295 (296)
234 cd06637 STKc_TNIK Catalytic do 100.0 1.3E-34 2.9E-39 314.6 21.9 203 622-835 4-219 (272)
235 KOG0669 Cyclin T-dependent kin 100.0 2.2E-37 4.7E-42 303.6 -0.1 295 624-942 17-324 (376)
236 cd08218 STKc_Nek1 Catalytic do 100.0 1.5E-34 3.2E-39 311.3 21.6 201 625-835 1-204 (256)
237 cd05058 PTKc_Met_Ron Catalytic 100.0 2.5E-34 5.5E-39 310.6 23.2 253 630-899 1-260 (262)
238 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-34 4.1E-39 313.1 22.3 257 623-900 5-267 (270)
239 cd05040 PTKc_Ack_like Catalyti 100.0 2.5E-34 5.3E-39 309.7 22.9 250 630-896 1-256 (257)
240 cd06624 STKc_ASK Catalytic dom 100.0 3E-34 6.4E-39 311.2 23.6 205 619-834 3-213 (268)
241 cd05095 PTKc_DDR2 Catalytic do 100.0 1.9E-34 4.2E-39 317.5 22.5 263 623-896 4-295 (296)
242 KOG0574 STE20-like serine/thre 100.0 1.3E-36 2.8E-41 304.6 4.5 248 624-894 33-283 (502)
243 cd08221 STKc_Nek9 Catalytic do 100.0 2E-34 4.4E-39 310.1 21.9 249 625-893 1-252 (256)
244 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.9E-34 4E-39 315.7 21.8 267 624-898 4-283 (284)
245 cd05060 PTKc_Syk_like Catalyti 100.0 2.5E-34 5.4E-39 309.8 22.4 249 630-898 1-255 (257)
246 cd06643 STKc_SLK Catalytic dom 100.0 2.8E-34 6.1E-39 313.9 23.1 200 625-835 6-211 (282)
247 cd05109 PTKc_HER2 Catalytic do 100.0 1.9E-34 4.1E-39 314.7 21.7 257 623-899 6-269 (279)
248 cd06631 STKc_YSK4 Catalytic do 100.0 3.8E-34 8.3E-39 309.8 23.9 205 625-835 1-211 (265)
249 cd08223 STKc_Nek4 Catalytic do 100.0 2.7E-34 5.8E-39 309.3 22.4 201 625-835 1-205 (257)
250 cd05047 PTKc_Tie Catalytic dom 100.0 2.3E-34 5E-39 312.5 22.0 249 630-899 1-269 (270)
251 cd05065 PTKc_EphR_B Catalytic 100.0 1.8E-34 3.9E-39 313.1 21.1 259 624-898 4-268 (269)
252 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.3E-34 9.3E-39 310.2 23.8 253 630-896 1-268 (269)
253 cd05580 STKc_PKA Catalytic dom 100.0 1.8E-34 4E-39 316.7 21.0 198 624-836 1-202 (290)
254 cd00192 PTKc Catalytic domain 100.0 3E-34 6.5E-39 309.3 22.0 248 630-895 1-261 (262)
255 cd07845 STKc_CDK10 Catalytic d 100.0 5.2E-35 1.1E-39 324.2 16.3 286 623-940 6-297 (309)
256 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.6E-34 5.6E-39 310.6 21.3 239 630-895 1-261 (262)
257 cd07835 STKc_CDK1_like Catalyt 100.0 1.6E-34 3.4E-39 316.0 19.7 278 626-936 1-283 (283)
258 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.6E-34 9.9E-39 312.9 23.2 200 624-835 1-210 (286)
259 cd06628 STKc_MAPKKK_Byr2_like 100.0 6.3E-34 1.4E-38 308.4 24.1 206 625-836 1-216 (267)
260 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-34 3E-39 318.5 18.5 281 624-937 1-295 (295)
261 cd05112 PTKc_Itk Catalytic dom 100.0 2.9E-34 6.3E-39 308.9 20.7 251 624-895 4-255 (256)
262 cd05041 PTKc_Fes_like Catalyti 100.0 7.7E-34 1.7E-38 304.7 23.8 248 630-896 1-250 (251)
263 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-34 3.1E-39 313.2 18.2 206 624-835 1-210 (267)
264 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.1E-34 2.4E-39 317.1 17.3 259 624-941 1-269 (283)
265 cd06644 STKc_STK10_LOK Catalyt 100.0 8.3E-34 1.8E-38 311.9 24.1 202 623-835 11-218 (292)
266 cd05578 STKc_Yank1 Catalytic d 100.0 1E-34 2.2E-39 312.9 16.5 199 625-836 1-203 (258)
267 cd06659 STKc_PAK6 Catalytic do 100.0 1.5E-34 3.3E-39 318.4 18.2 260 629-948 26-286 (297)
268 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-34 4E-39 314.5 18.6 193 632-835 1-197 (277)
269 KOG0596 Dual specificity; seri 100.0 8.3E-35 1.8E-39 314.6 15.5 251 623-893 360-626 (677)
270 cd07864 STKc_CDK12 Catalytic d 100.0 1.6E-34 3.6E-39 319.0 18.3 276 621-936 4-302 (302)
271 cd05057 PTKc_EGFR_like Catalyt 100.0 6.6E-34 1.4E-38 310.5 22.8 258 623-900 6-270 (279)
272 cd06612 STKc_MST1_2 Catalytic 100.0 6.4E-34 1.4E-38 306.1 22.3 200 623-835 2-202 (256)
273 cd06611 STKc_SLK_like Catalyti 100.0 4.4E-34 9.5E-39 312.0 21.2 202 623-835 4-211 (280)
274 cd05044 PTKc_c-ros Catalytic d 100.0 5.2E-34 1.1E-38 309.4 21.6 249 630-896 1-268 (269)
275 cd06656 STKc_PAK3 Catalytic do 100.0 3.5E-34 7.5E-39 315.6 20.4 261 624-946 19-282 (297)
276 PHA03390 pk1 serine/threonine- 100.0 2.3E-34 5E-39 311.8 18.6 254 618-938 8-267 (267)
277 KOG4236 Serine/threonine prote 100.0 9.6E-36 2.1E-40 318.0 7.6 253 629-941 569-827 (888)
278 cd05083 PTKc_Chk Catalytic dom 100.0 3.3E-34 7.2E-39 308.2 19.5 246 624-896 6-252 (254)
279 cd06645 STKc_MAP4K3 Catalytic 100.0 4.1E-34 9E-39 309.9 20.4 201 623-835 8-212 (267)
280 cd06609 STKc_MST3_like Catalyt 100.0 5E-34 1.1E-38 310.5 21.1 199 624-835 1-201 (274)
281 cd05042 PTKc_Aatyk Catalytic d 100.0 9.3E-34 2E-38 307.5 23.1 251 631-895 2-267 (269)
282 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.3E-34 7.2E-39 311.8 19.5 238 631-895 2-273 (274)
283 PTZ00266 NIMA-related protein 100.0 2.7E-34 5.9E-39 345.0 20.4 258 618-893 7-294 (1021)
284 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.3E-34 2.9E-39 312.1 16.1 239 630-895 1-257 (258)
285 cd08220 STKc_Nek8 Catalytic do 100.0 6.7E-34 1.5E-38 306.0 21.4 200 625-835 1-204 (256)
286 cd07833 STKc_CDKL Catalytic do 100.0 1.7E-34 3.7E-39 316.5 16.8 279 624-936 1-288 (288)
287 cd06638 STKc_myosinIIIA Cataly 100.0 5.4E-34 1.2E-38 312.2 20.6 212 614-836 8-233 (286)
288 cd07840 STKc_CDK9_like Catalyt 100.0 2E-34 4.4E-39 315.5 17.1 280 626-936 1-287 (287)
289 cd07849 STKc_ERK1_2_like Catal 100.0 4.5E-34 9.8E-39 320.5 20.2 289 623-942 4-301 (336)
290 cd07836 STKc_Pho85 Catalytic d 100.0 5.8E-34 1.3E-38 311.6 20.5 280 625-936 1-284 (284)
291 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.6E-34 1.2E-38 311.9 20.3 199 623-835 4-205 (284)
292 cd07865 STKc_CDK9 Catalytic do 100.0 2.3E-34 5.1E-39 318.9 17.4 286 623-936 11-310 (310)
293 cd08216 PK_STRAD Pseudokinase 100.0 7.5E-34 1.6E-38 315.7 21.3 293 629-942 7-304 (314)
294 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-33 3.1E-38 304.5 22.9 203 623-836 2-208 (262)
295 cd05046 PTK_CCK4 Pseudokinase 100.0 1.1E-33 2.4E-38 307.9 22.2 254 624-896 5-274 (275)
296 cd06651 STKc_MEKK3 Catalytic d 100.0 2.2E-33 4.7E-38 304.1 24.3 203 624-835 2-212 (266)
297 KOG0579 Ste20-like serine/thre 100.0 3.2E-35 7E-40 319.4 9.9 200 624-834 32-237 (1187)
298 PLN00009 cyclin-dependent kina 100.0 3.2E-34 6.9E-39 315.5 18.0 284 624-939 2-290 (294)
299 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.6E-34 1E-38 311.3 18.9 247 625-894 5-253 (277)
300 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-33 2.9E-38 308.6 22.5 210 615-835 7-229 (282)
301 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6.6E-34 1.4E-38 311.0 20.1 267 624-898 4-283 (284)
302 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-33 3.5E-38 307.0 22.8 247 624-893 4-252 (277)
303 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.2E-34 1.6E-38 311.5 19.9 200 624-835 1-206 (287)
304 cd06648 STKc_PAK_II Catalytic 100.0 1.4E-33 3E-38 308.9 22.0 257 625-941 20-277 (285)
305 cd05633 STKc_GRK3 Catalytic do 100.0 5.2E-34 1.1E-38 311.2 18.1 190 631-834 1-198 (279)
306 cd06652 STKc_MEKK2 Catalytic d 100.0 3.9E-33 8.5E-38 301.9 24.8 203 624-835 2-212 (265)
307 cd08226 PK_STRAD_beta Pseudoki 100.0 4.1E-34 8.8E-39 319.7 17.6 204 630-836 4-214 (328)
308 cd06639 STKc_myosinIIIB Cataly 100.0 1.7E-33 3.8E-38 309.2 22.3 211 614-835 12-236 (291)
309 cd06632 STKc_MEKK1_plant Catal 100.0 2.4E-33 5.3E-38 301.9 23.0 199 625-836 1-206 (258)
310 smart00219 TyrKc Tyrosine kina 100.0 1.6E-33 3.4E-38 303.2 21.5 250 626-894 1-257 (258)
311 cd07855 STKc_ERK5 Catalytic do 100.0 5.9E-34 1.3E-38 319.3 18.7 290 623-941 4-302 (334)
312 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.7E-33 5.8E-38 303.7 23.1 251 631-895 2-266 (268)
313 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.2E-34 1.6E-38 319.5 19.3 284 623-938 4-305 (342)
314 cd05572 STKc_cGK_PKG Catalytic 100.0 7.9E-34 1.7E-38 306.7 18.2 192 632-836 1-196 (262)
315 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.2E-33 7E-38 303.9 22.7 255 626-898 1-272 (273)
316 cd06626 STKc_MEKK4 Catalytic d 100.0 4.3E-33 9.3E-38 301.1 23.5 203 625-835 1-209 (264)
317 cd06605 PKc_MAPKK Catalytic do 100.0 2.1E-33 4.6E-38 303.8 21.0 199 624-835 1-202 (265)
318 cd08528 STKc_Nek10 Catalytic d 100.0 2.6E-33 5.6E-38 304.0 21.4 251 625-896 1-268 (269)
319 cd07866 STKc_BUR1 Catalytic do 100.0 6.3E-34 1.4E-38 315.6 16.8 288 623-936 7-311 (311)
320 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-33 2.5E-38 318.2 19.0 284 616-939 9-306 (345)
321 cd07831 STKc_MOK Catalytic dom 100.0 1.2E-33 2.6E-38 308.7 18.5 276 626-936 1-282 (282)
322 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-33 5.6E-38 301.9 20.8 237 630-895 1-258 (259)
323 cd06630 STKc_MEKK1 Catalytic d 100.0 6.6E-33 1.4E-37 300.5 24.1 202 625-834 1-210 (268)
324 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.9E-33 1.1E-37 302.3 22.9 201 625-835 2-215 (272)
325 cd06608 STKc_myosinIII_like Ca 100.0 4.1E-33 8.8E-38 303.1 22.2 203 622-835 4-221 (275)
326 cd05609 STKc_MAST Catalytic do 100.0 4.9E-33 1.1E-37 307.7 23.2 259 624-895 1-271 (305)
327 cd08217 STKc_Nek2 Catalytic do 100.0 4.3E-33 9.2E-38 301.0 22.1 202 625-836 1-214 (265)
328 cd07879 STKc_p38delta_MAPK13 C 100.0 8.6E-34 1.9E-38 318.9 17.2 281 623-941 14-305 (342)
329 cd08225 STKc_Nek5 Catalytic do 100.0 2E-33 4.2E-38 302.5 19.2 201 625-835 1-205 (257)
330 cd06623 PKc_MAPKK_plant_like C 100.0 6.9E-33 1.5E-37 299.4 23.5 201 624-836 1-204 (264)
331 KOG0690 Serine/threonine prote 100.0 7E-35 1.5E-39 295.3 7.3 201 623-835 167-371 (516)
332 cd05579 STKc_MAST_like Catalyt 100.0 1.4E-33 3E-38 304.8 17.9 199 632-835 1-204 (265)
333 cd07834 STKc_MAPK Catalytic do 100.0 1.1E-33 2.4E-38 316.6 17.7 290 625-944 1-300 (330)
334 cd06647 STKc_PAK_I Catalytic d 100.0 4.5E-33 9.8E-38 306.1 21.6 200 624-836 19-219 (293)
335 KOG0612 Rho-associated, coiled 100.0 1.8E-34 3.8E-39 334.8 10.5 209 616-835 67-284 (1317)
336 KOG1290 Serine/threonine prote 100.0 2.4E-34 5.1E-39 307.0 10.6 292 623-939 77-556 (590)
337 cd05118 STKc_CMGC Catalytic do 100.0 2.1E-33 4.5E-38 306.9 18.1 278 626-936 1-283 (283)
338 PTZ00024 cyclin-dependent prot 100.0 2.5E-33 5.5E-38 314.4 19.2 292 623-942 7-322 (335)
339 cd07830 STKc_MAK_like Catalyti 100.0 4.6E-33 1E-37 304.3 20.2 279 626-936 1-283 (283)
340 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-33 4.9E-38 306.0 17.6 207 624-835 1-225 (280)
341 cd07838 STKc_CDK4_6_like Catal 100.0 9.4E-33 2E-37 302.4 22.5 276 626-936 1-287 (287)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2E-33 4.3E-38 315.3 17.5 284 623-943 4-301 (337)
343 KOG4645 MAPKKK (MAP kinase kin 100.0 7.9E-35 1.7E-39 341.8 6.2 255 622-893 1233-1493(1509)
344 cd06614 STKc_PAK Catalytic dom 100.0 1.2E-32 2.7E-37 301.6 23.2 203 622-836 17-220 (286)
345 cd05613 STKc_MSK1_N N-terminal 100.0 4.7E-33 1E-37 305.5 19.9 199 625-834 1-210 (290)
346 cd07829 STKc_CDK_like Catalyti 100.0 1.1E-33 2.5E-38 308.8 14.9 277 626-936 1-282 (282)
347 cd06917 STKc_NAK1_like Catalyt 100.0 8.5E-33 1.8E-37 301.3 21.6 198 625-835 2-205 (277)
348 cd06641 STKc_MST3 Catalytic do 100.0 1.2E-32 2.6E-37 300.2 22.8 246 625-893 5-252 (277)
349 cd06607 STKc_TAO Catalytic dom 100.0 2.6E-32 5.5E-37 302.3 24.7 245 623-893 14-266 (307)
350 cd07852 STKc_MAPK15 Catalytic 100.0 7.9E-33 1.7E-37 310.6 20.8 290 622-941 5-303 (337)
351 cd06657 STKc_PAK4 Catalytic do 100.0 2.3E-33 4.9E-38 308.2 16.0 252 630-941 26-278 (292)
352 KOG0983 Mitogen-activated prot 100.0 1.5E-33 3.1E-38 280.1 12.5 249 625-894 93-349 (391)
353 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.2E-33 1.3E-37 311.9 19.4 281 622-939 13-304 (343)
354 cd07851 STKc_p38 Catalytic dom 100.0 3.2E-33 7E-38 314.3 16.7 281 622-940 13-305 (343)
355 cd05606 STKc_beta_ARK Catalyti 100.0 6.2E-33 1.3E-37 302.6 18.2 191 631-835 1-199 (278)
356 cd06606 STKc_MAPKKK Catalytic 100.0 3.8E-32 8.2E-37 292.3 23.8 202 625-836 1-207 (260)
357 KOG0664 Nemo-like MAPK-related 100.0 1.1E-34 2.4E-39 287.3 3.7 282 628-937 57-347 (449)
358 cd05611 STKc_Rim15_like Cataly 100.0 1.3E-32 2.9E-37 296.8 20.2 190 630-835 2-196 (260)
359 PLN00113 leucine-rich repeat r 100.0 1.8E-32 4E-37 350.0 25.0 298 82-385 260-560 (968)
360 cd05122 PKc_STE Catalytic doma 100.0 4.5E-32 9.7E-37 290.4 24.1 199 625-835 1-200 (253)
361 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-32 2.7E-37 301.9 19.8 199 625-835 5-213 (288)
362 cd08215 STKc_Nek Catalytic dom 100.0 2.4E-32 5.3E-37 293.7 20.8 201 625-835 1-206 (258)
363 cd06627 STKc_Cdc7_like Catalyt 100.0 5.2E-32 1.1E-36 290.7 22.9 200 625-836 1-203 (254)
364 PHA02882 putative serine/threo 100.0 2.9E-32 6.3E-37 299.7 21.4 264 623-895 11-293 (294)
365 KOG1006 Mitogen-activated prot 100.0 3E-34 6.6E-39 284.1 4.6 246 629-894 69-327 (361)
366 KOG1151 Tousled-like protein k 100.0 5.5E-34 1.2E-38 298.9 6.8 274 618-938 457-746 (775)
367 cd08530 STKc_CNK2-like Catalyt 100.0 5E-32 1.1E-36 291.3 22.3 247 625-893 1-252 (256)
368 KOG0200 Fibroblast/platelet-de 100.0 2.3E-32 5E-37 325.8 21.2 264 618-899 290-580 (609)
369 cd06653 STKc_MEKK3_like_1 Cata 100.0 8.7E-32 1.9E-36 291.2 23.9 203 624-835 2-212 (264)
370 cd06635 STKc_TAO1 Catalytic do 100.0 9.2E-32 2E-36 299.2 24.2 245 626-896 27-279 (317)
371 cd07857 STKc_MPK1 Catalytic do 100.0 2.6E-32 5.7E-37 305.7 19.5 282 625-938 1-297 (332)
372 PLN03224 probable serine/threo 100.0 2.4E-32 5.3E-37 313.9 19.3 271 622-938 143-505 (507)
373 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.3E-32 7.1E-37 304.0 19.8 287 618-941 4-296 (328)
374 KOG4194 Membrane glycoprotein 100.0 1.1E-33 2.5E-38 306.4 7.6 318 81-399 77-466 (873)
375 cd06618 PKc_MKK7 Catalytic dom 100.0 6.3E-32 1.4E-36 297.6 21.3 199 623-834 14-220 (296)
376 KOG1024 Receptor-like protein 100.0 1.7E-32 3.7E-37 284.6 15.2 268 616-901 276-558 (563)
377 KOG0665 Jun-N-terminal kinase 100.0 2.3E-33 5E-38 285.8 8.6 282 623-937 16-314 (369)
378 KOG0586 Serine/threonine prote 100.0 8.2E-33 1.8E-37 305.4 12.8 200 623-835 55-258 (596)
379 cd05123 STKc_AGC Catalytic dom 100.0 4.1E-32 8.8E-37 291.0 17.6 192 632-835 1-196 (250)
380 cd05583 STKc_MSK_N N-terminal 100.0 8E-32 1.7E-36 295.5 20.0 199 625-834 1-210 (288)
381 cd08222 STKc_Nek11 Catalytic d 100.0 1.4E-31 3E-36 288.8 21.4 200 625-835 1-208 (260)
382 KOG4250 TANK binding protein k 100.0 2.5E-32 5.5E-37 305.1 15.4 200 626-836 15-228 (732)
383 KOG0668 Casein kinase II, alph 100.0 5.8E-33 1.3E-37 269.1 8.5 279 623-940 37-329 (338)
384 KOG1035 eIF-2alpha kinase GCN2 100.0 3.6E-32 7.8E-37 318.3 16.7 256 622-893 477-870 (1351)
385 cd05610 STKc_MASTL Catalytic d 100.0 6.3E-32 1.4E-36 327.1 19.4 146 624-774 4-153 (669)
386 KOG0603 Ribosomal protein S6 k 100.0 1.5E-32 3.2E-37 305.1 12.0 247 623-940 321-571 (612)
387 cd05576 STKc_RPK118_like Catal 100.0 7.7E-32 1.7E-36 286.6 17.1 179 635-833 4-183 (237)
388 PLN03225 Serine/threonine-prot 100.0 3.4E-32 7.3E-37 321.2 15.6 277 622-941 130-458 (566)
389 cd06634 STKc_TAO2 Catalytic do 100.0 3.7E-31 8E-36 293.1 22.6 196 624-835 15-217 (308)
390 cd06633 STKc_TAO3 Catalytic do 100.0 6.1E-31 1.3E-35 292.0 23.9 195 626-836 23-224 (313)
391 KOG0696 Serine/threonine prote 100.0 3.9E-32 8.5E-37 283.0 11.0 243 621-886 346-593 (683)
392 KOG0587 Traf2- and Nck-interac 100.0 5E-31 1.1E-35 299.9 17.7 258 615-893 10-281 (953)
393 KOG1167 Serine/threonine prote 100.0 2.6E-31 5.7E-36 281.3 10.7 296 618-938 30-386 (418)
394 KOG1027 Serine/threonine prote 100.0 6.2E-32 1.3E-36 305.9 5.0 256 626-942 511-776 (903)
395 KOG0670 U4/U6-associated splic 100.0 1.8E-31 3.9E-36 285.7 8.1 213 611-837 419-640 (752)
396 KOG0984 Mitogen-activated prot 100.0 2E-30 4.3E-35 248.2 11.9 215 619-844 41-264 (282)
397 smart00220 S_TKc Serine/Threon 100.0 1E-28 2.2E-33 262.5 21.1 187 636-835 1-189 (244)
398 KOG0614 cGMP-dependent protein 100.0 2.1E-30 4.4E-35 277.0 7.5 242 624-887 420-665 (732)
399 KOG0608 Warts/lats-like serine 100.0 1E-29 2.2E-34 277.4 12.4 210 623-837 628-876 (1034)
400 KOG0695 Serine/threonine prote 100.0 1.2E-29 2.7E-34 257.9 12.1 246 620-886 246-502 (593)
401 KOG0444 Cytoskeletal regulator 99.9 9E-30 1.9E-34 277.1 -3.6 290 83-384 79-374 (1255)
402 KOG1152 Signal transduction se 99.9 6.5E-28 1.4E-32 262.0 9.6 196 624-833 561-770 (772)
403 KOG4194 Membrane glycoprotein 99.9 4E-28 8.7E-33 263.5 6.6 292 84-383 54-352 (873)
404 cd00180 PKc Catalytic domain o 99.9 1.5E-25 3.2E-30 232.2 21.1 210 632-894 1-214 (215)
405 KOG0444 Cytoskeletal regulator 99.9 3.7E-29 7.9E-34 272.4 -6.6 294 83-386 56-353 (1255)
406 KOG4237 Extracellular matrix p 99.9 2.8E-28 6E-33 254.5 -0.5 342 60-436 38-404 (498)
407 KOG0576 Mitogen-activated prot 99.9 2.6E-27 5.6E-32 261.6 6.4 298 623-941 14-316 (829)
408 smart00221 STYKc Protein kinas 99.9 2.4E-25 5.2E-30 234.0 20.3 199 626-834 1-202 (225)
409 KOG1345 Serine/threonine kinas 99.9 1.5E-25 3.3E-30 223.0 11.0 252 623-896 23-286 (378)
410 KOG0472 Leucine-rich repeat pr 99.9 4.4E-27 9.5E-32 245.5 -4.2 346 26-385 76-541 (565)
411 KOG0472 Leucine-rich repeat pr 99.9 7E-27 1.5E-31 244.0 -6.8 263 84-385 47-310 (565)
412 KOG0195 Integrin-linked kinase 99.9 1.5E-24 3.3E-29 215.4 7.5 247 629-898 195-446 (448)
413 PLN00181 protein SPA1-RELATED; 99.9 2.2E-24 4.7E-29 268.2 10.1 201 676-893 28-264 (793)
414 smart00750 KIND kinase non-cat 99.9 1.8E-22 3.9E-27 204.0 15.4 167 705-898 1-169 (176)
415 PRK09188 serine/threonine prot 99.9 1.8E-22 3.9E-27 222.9 16.0 172 620-807 14-195 (365)
416 KOG1164 Casein kinase (serine/ 99.9 1.2E-21 2.5E-26 217.6 22.2 265 625-901 19-300 (322)
417 PRK15387 E3 ubiquitin-protein 99.9 3.7E-22 8.1E-27 237.2 17.3 256 84-386 203-459 (788)
418 KOG0618 Serine/threonine phosp 99.9 6.7E-24 1.4E-28 243.1 0.7 186 195-384 257-488 (1081)
419 PRK15370 E3 ubiquitin-protein 99.9 1.2E-21 2.5E-26 234.8 18.9 247 106-386 178-429 (754)
420 KOG1165 Casein kinase (serine/ 99.9 5.9E-21 1.3E-25 195.7 18.6 272 625-908 29-309 (449)
421 KOG0590 Checkpoint kinase and 99.9 3.4E-23 7.4E-28 243.6 2.2 262 628-939 322-591 (601)
422 KOG1163 Casein kinase (serine/ 99.9 1.7E-21 3.6E-26 191.3 13.1 269 623-902 14-288 (341)
423 PRK15370 E3 ubiquitin-protein 99.8 1.7E-20 3.8E-25 224.7 15.6 251 83-364 179-429 (754)
424 COG0515 SPS1 Serine/threonine 99.8 3E-19 6.5E-24 198.5 23.7 257 626-894 2-275 (384)
425 PRK15387 E3 ubiquitin-protein 99.8 4.7E-20 1E-24 219.4 15.2 239 82-365 222-460 (788)
426 PLN03210 Resistant to P. syrin 99.8 4.2E-19 9.1E-24 227.6 22.5 278 84-381 591-878 (1153)
427 KOG1240 Protein kinase contain 99.8 5.9E-21 1.3E-25 222.1 3.8 253 625-896 24-293 (1431)
428 cd05147 RIO1_euk RIO kinase fa 99.8 1.1E-19 2.4E-24 184.9 11.6 140 629-776 2-168 (190)
429 PRK10359 lipopolysaccharide co 99.8 6E-20 1.3E-24 188.4 9.6 172 621-826 28-216 (232)
430 PLN03210 Resistant to P. syrin 99.8 1.9E-18 4E-23 221.7 20.0 270 98-385 580-859 (1153)
431 cd05145 RIO1_like RIO kinase f 99.8 1.3E-18 2.9E-23 177.7 14.4 139 629-776 2-168 (190)
432 PRK12274 serine/threonine prot 99.8 1.1E-18 2.5E-23 174.9 12.2 191 627-834 5-209 (218)
433 KOG0617 Ras suppressor protein 99.8 7.6E-21 1.7E-25 177.2 -3.4 165 126-343 29-194 (264)
434 KOG1023 Natriuretic peptide re 99.8 1.5E-18 3.3E-23 194.6 11.0 217 674-900 1-226 (484)
435 KOG0617 Ras suppressor protein 99.7 3.2E-20 7E-25 173.1 -3.7 166 101-272 28-194 (264)
436 cd00116 LRR_RI Leucine-rich re 99.7 1.5E-20 3.2E-25 209.4 -7.2 251 86-336 2-293 (319)
437 KOG0618 Serine/threonine phosp 99.7 5.7E-20 1.2E-24 211.1 -3.5 269 82-364 219-490 (1081)
438 PRK10345 hypothetical protein; 99.7 2E-17 4.4E-22 169.6 14.1 136 627-772 5-156 (210)
439 KOG1166 Mitotic checkpoint ser 99.7 1.5E-17 3.3E-22 198.9 14.7 253 618-900 692-955 (974)
440 KOG0603 Ribosomal protein S6 k 99.7 7.2E-19 1.6E-23 196.4 2.7 225 631-888 1-232 (612)
441 PF14531 Kinase-like: Kinase-l 99.7 4.8E-17 1E-21 172.1 15.8 229 628-885 16-288 (288)
442 cd00116 LRR_RI Leucine-rich re 99.7 1.7E-19 3.8E-24 200.8 -7.2 273 110-384 2-319 (319)
443 KOG4237 Extracellular matrix p 99.7 1.7E-19 3.7E-24 189.1 -6.8 280 87-387 51-337 (498)
444 KOG0606 Microtubule-associated 99.7 1.4E-17 3E-22 194.5 6.4 172 623-836 82-262 (1205)
445 KOG4158 BRPK/PTEN-induced prot 99.7 2.1E-16 4.6E-21 165.8 13.1 202 678-896 274-512 (598)
446 PRK14879 serine/threonine prot 99.7 2.5E-16 5.3E-21 164.2 13.4 134 630-774 2-143 (211)
447 cd05144 RIO2_C RIO kinase fami 99.7 3.2E-16 7E-21 161.4 13.8 144 618-776 9-176 (198)
448 smart00090 RIO RIO-like kinase 99.7 3.6E-16 7.8E-21 164.6 12.6 143 625-776 29-199 (237)
449 PLN03150 hypothetical protein; 99.7 4.6E-16 9.9E-21 186.4 12.9 157 29-189 366-526 (623)
450 TIGR03724 arch_bud32 Kae1-asso 99.6 6.2E-16 1.3E-20 159.6 12.0 130 631-774 1-138 (199)
451 PRK09605 bifunctional UGMP fam 99.6 5.2E-16 1.1E-20 184.2 12.9 145 616-774 325-476 (535)
452 KOG1033 eIF-2alpha kinase PEK/ 99.6 3.8E-16 8.2E-21 171.6 4.4 128 693-827 329-457 (516)
453 cd05119 RIO RIO kinase family, 99.6 1.8E-14 3.8E-19 147.1 12.3 136 629-776 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.6 3.1E-14 6.6E-19 139.4 12.8 135 628-774 2-138 (155)
455 KOG0590 Checkpoint kinase and 99.5 2.1E-15 4.6E-20 178.0 1.6 263 623-938 19-291 (601)
456 PRK01723 3-deoxy-D-manno-octul 99.5 1E-13 2.2E-18 146.3 13.8 135 629-774 36-191 (239)
457 KOG0532 Leucine-rich repeat (L 99.4 1.4E-14 2.9E-19 159.1 -1.5 180 130-342 75-254 (722)
458 KOG0532 Leucine-rich repeat (L 99.4 3.9E-14 8.5E-19 155.5 -0.4 196 103-308 72-271 (722)
459 TIGR01982 UbiB 2-polyprenylphe 99.4 1.7E-12 3.8E-17 148.9 12.7 140 629-776 122-308 (437)
460 COG4886 Leucine-rich repeat (L 99.4 6.5E-13 1.4E-17 152.4 7.4 201 110-318 97-298 (394)
461 COG4886 Leucine-rich repeat (L 99.3 1E-12 2.2E-17 150.8 7.1 199 134-341 97-297 (394)
462 KOG1266 Protein kinase [Signal 99.3 3.5E-12 7.5E-17 131.7 9.4 154 673-830 120-280 (458)
463 KOG1243 Protein kinase [Genera 99.3 1E-11 2.2E-16 140.7 10.3 166 645-828 34-199 (690)
464 PRK04750 ubiB putative ubiquin 99.2 2.4E-11 5.3E-16 140.7 11.5 143 624-777 120-316 (537)
465 cd05151 ChoK Choline Kinase (C 99.2 4.5E-11 9.8E-16 119.8 9.0 131 629-774 3-136 (170)
466 KOG0601 Cyclin-dependent kinas 99.2 3.7E-11 8E-16 135.5 8.0 249 624-892 114-377 (524)
467 KOG3207 Beta-tubulin folding c 99.2 3.2E-12 6.9E-17 136.9 -0.5 209 104-336 119-341 (505)
468 KOG3207 Beta-tubulin folding c 99.2 6.2E-12 1.3E-16 134.7 1.0 206 82-287 121-339 (505)
469 KOG1259 Nischarin, modulator o 99.2 4.2E-12 9.2E-17 129.1 -0.7 131 200-335 282-413 (490)
470 KOG1909 Ran GTPase-activating 99.1 7E-13 1.5E-17 138.4 -7.0 180 154-333 92-310 (382)
471 PLN03150 hypothetical protein; 99.1 5.7E-11 1.2E-15 142.7 6.7 110 131-240 419-529 (623)
472 cd05146 RIO3_euk RIO kinase fa 99.1 5.7E-10 1.2E-14 112.5 12.9 137 629-776 2-175 (197)
473 KOG1259 Nischarin, modulator o 99.1 1.4E-11 3E-16 125.5 0.8 132 220-385 278-412 (490)
474 KOG0601 Cyclin-dependent kinas 99.1 1.3E-10 2.7E-15 131.2 6.9 246 619-893 260-513 (524)
475 KOG1909 Ran GTPase-activating 99.1 9.8E-12 2.1E-16 130.0 -1.9 256 100-384 24-310 (382)
476 KOG3087 Serine/threonine prote 99.1 1.5E-09 3.2E-14 104.4 12.9 143 628-774 11-165 (229)
477 KOG0531 Protein phosphatase 1, 99.1 3.7E-11 8.1E-16 138.2 1.4 247 104-365 70-320 (414)
478 KOG0606 Microtubule-associated 99.1 7.6E-11 1.7E-15 139.0 3.7 210 622-836 802-1039(1205)
479 PF14580 LRR_9: Leucine-rich r 99.0 3.7E-11 7.9E-16 118.7 0.8 118 114-238 5-125 (175)
480 cd05154 ACAD10_11_like Acyl-Co 99.0 1.4E-09 3.1E-14 114.0 11.5 142 630-774 4-206 (223)
481 PF14580 LRR_9: Leucine-rich r 99.0 9.3E-11 2E-15 115.9 2.1 109 102-215 15-126 (175)
482 COG3642 Mn2+-dependent serine/ 99.0 2.7E-09 6E-14 103.4 12.1 131 630-774 2-140 (204)
483 KOG0531 Protein phosphatase 1, 99.0 3E-11 6.6E-16 138.9 -2.4 217 106-334 49-268 (414)
484 KOG4658 Apoptotic ATPase [Sign 98.9 6.2E-10 1.3E-14 136.5 4.0 248 84-336 547-809 (889)
485 KOG3741 Poly(A) ribonuclease s 98.9 1E-07 2.2E-12 105.2 18.6 167 637-830 289-474 (655)
486 PRK15123 lipopolysaccharide co 98.8 5.5E-08 1.2E-12 103.9 14.3 140 631-774 29-194 (268)
487 PF01163 RIO1: RIO1 family; I 98.8 3.5E-08 7.5E-13 99.3 11.4 126 639-776 1-157 (188)
488 KOG1859 Leucine-rich repeat pr 98.8 9.4E-11 2E-15 132.3 -8.8 179 171-388 102-295 (1096)
489 KOG2137 Protein kinase [Signal 98.6 1E-08 2.2E-13 117.2 2.2 184 730-926 107-292 (700)
490 COG0478 RIO-like serine/threon 98.6 2.1E-07 4.5E-12 95.9 11.2 137 626-776 93-253 (304)
491 PF13855 LRR_8: Leucine rich r 98.6 1.4E-08 3.1E-13 82.5 2.2 59 107-165 2-60 (61)
492 KOG4658 Apoptotic ATPase [Sign 98.6 4.3E-08 9.4E-13 120.5 6.9 271 83-365 524-809 (889)
493 PF13855 LRR_8: Leucine rich r 98.6 2E-08 4.4E-13 81.6 2.6 58 156-213 3-60 (61)
494 KOG2982 Uncharacterized conser 98.6 8.3E-09 1.8E-13 105.6 -0.2 198 84-288 47-263 (418)
495 COG4248 Uncharacterized protei 98.5 3.2E-06 6.9E-11 91.2 17.8 259 628-902 15-304 (637)
496 KOG1859 Leucine-rich repeat pr 98.5 4.8E-09 1E-13 118.8 -4.7 125 132-263 166-291 (1096)
497 COG5238 RNA1 Ran GTPase-activa 98.5 1.8E-08 4E-13 101.9 -1.6 233 102-363 26-285 (388)
498 PRK09902 hypothetical protein; 98.4 2.3E-06 4.9E-11 86.6 12.6 137 633-774 27-179 (216)
499 KOG2982 Uncharacterized conser 98.4 4.1E-08 8.8E-13 100.7 -0.6 201 82-282 71-287 (418)
500 PF06293 Kdo: Lipopolysacchari 98.4 1.4E-06 3.1E-11 90.0 10.3 107 664-775 55-171 (206)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.9e-75 Score=743.30 Aligned_cols=259 Identities=27% Similarity=0.453 Sum_probs=208.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
...|...+.||+|+||.||+|.. .+++.||||++...... ..+|++.+++++||||++++|+|.+++..++||||
T Consensus 689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey 764 (968)
T PLN00113 689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEY 764 (968)
T ss_pred HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeC
Confidence 34677889999999999999996 47899999998753322 23468899999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.++++. ++|..+.+|+.||++||+|||..+.++|+||||||+||+++.++.+++. ||.+.....
T Consensus 765 ~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 765 IEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred CCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 999999999953 7899999999999999999997766669999999999999999988876 665543211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC----chhHHHHHHHhhcccchhhccC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG----KNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~----~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.....++..|+|||++.+..++.++|||||||++|||+||+.||... ....++....+........+++
T Consensus 835 -------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (968)
T PLN00113 835 -------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDP 907 (968)
T ss_pred -------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCc
Confidence 11235789999999999999999999999999999999999998542 2234444433333333333443
Q ss_pred CCC---CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002178 858 NMG---SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 858 ~~~---~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
... ..+.+...++.+++.+||+.+|++||+|.++++.|+++....
T Consensus 908 ~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~ 955 (968)
T PLN00113 908 SIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSS 955 (968)
T ss_pred cccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence 332 234567778899999999999999999999999999886543
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-50 Score=442.80 Aligned_cols=284 Identities=52% Similarity=0.884 Sum_probs=247.7
Q ss_pred CcccccHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccc
Q 002178 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC 689 (956)
Q Consensus 610 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~ 689 (956)
..+.|++.++..||++|...+.||+|+||.||+|..++|+.||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999999999999988765443145699999999999999999999999
Q ss_pred ccCC-cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002178 690 DEEG-EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 690 ~~~~-~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
.+.+ +.+||||||++|+|.++++.....+++|.+|++||.++|+||+|||+.+.++||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 599999999999999999876543799999999999999999999999999999999999999999999999999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC-----chhHHHHH
Q 002178 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG-----KNIVREVN 843 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~-----~~~~~~~~ 843 (956)
||+|+..+... ........||.+|+|||++..+..+.|+||||||++++|++||+.+.+.. ....+|..
T Consensus 221 FGLa~~~~~~~------~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~ 294 (361)
T KOG1187|consen 221 FGLAKLGPEGD------TSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAK 294 (361)
T ss_pred ccCcccCCccc------cceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHH
Confidence 99997653210 11111117999999999999999999999999999999999999888743 23577777
Q ss_pred HHhhcccchhhccCCCC--CCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 844 IAYQSSMMFSVIDGNMG--SYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.......+.+++|+.+. .++. +...++..++.+|++.+|..||+|.+|+++|+.+.
T Consensus 295 ~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 295 PLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 77777788899999874 5554 68888999999999999999999999999996553
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-47 Score=398.64 Aligned_cols=262 Identities=25% Similarity=0.412 Sum_probs=209.4
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChh-------hHHHHHHHHHHHHhcCCCceeeeecccccCC
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ-------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 693 (956)
..+.|.+.+.||+|+||.|-+|.. ++|+.||||+++..... ....+.+|+++|++++|||||+++++|...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 346788899999999999999995 47999999998753221 1234579999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC---CcEEEEeec
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFG 770 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~DfG 770 (956)
..|+|||||+||+|.+.+-.+. .+.+...+.+++|++.|+.|||++| |+||||||+|||+..+ ..+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999987654 4777888899999999999999999 9999999999999766 789999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCC---CCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKL---TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
+|+.... ...+...+||+.|.|||++.+..+ ..++|+||+||+||-+++|..||.......
T Consensus 325 lAK~~g~--------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-------- 388 (475)
T KOG0615|consen 325 LAKVSGE--------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-------- 388 (475)
T ss_pred hhhcccc--------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc--------
Confidence 9998642 345677899999999999987543 347899999999999999999997542211
Q ss_pred cccch-hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCC
Q 002178 848 SSMMF-SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 926 (956)
Q Consensus 848 ~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s 926 (956)
.+. .+..+.....|. .+ .+.+.++.+||++||+.||++|+|
T Consensus 389 --sl~eQI~~G~y~f~p~-~w-----------------------------------~~Iseea~dlI~~mL~VdP~~R~s 430 (475)
T KOG0615|consen 389 --SLKEQILKGRYAFGPL-QW-----------------------------------DRISEEALDLINWMLVVDPENRPS 430 (475)
T ss_pred --cHHHHHhcCcccccCh-hh-----------------------------------hhhhHHHHHHHHHhhEeCcccCcC
Confidence 011 111122211111 11 111334558999999999999999
Q ss_pred CccCCCCCccccCCCC
Q 002178 927 SSSMLKHPYVSSDVSG 942 (956)
Q Consensus 927 a~e~L~HP~f~~~~~~ 942 (956)
++|||+||||....-+
T Consensus 431 ~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 431 ADEALNHPWFKDAPCL 446 (475)
T ss_pred HHHHhcChhhhccccc
Confidence 9999999999865544
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-45 Score=401.09 Aligned_cols=259 Identities=38% Similarity=0.587 Sum_probs=220.8
Q ss_pred CCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh--HHHHHHHHHHHHhcCCCceeeeecccccCC-cEEEEEecCCC
Q 002178 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFMSN 704 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~LV~e~~~~ 704 (956)
..+.||+|+||+||+|.++....||||++....... .++|.+|+.+|++++|||||+|+|+|.+.. ..++|||||++
T Consensus 45 ~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~ 124 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPG 124 (362)
T ss_pred hhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCC
Confidence 345699999999999999765559999998654332 468999999999999999999999998887 79999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccccccCCCCCCCc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~~~ 783 (956)
|+|.++++......+++..+++++.|||+||.|||+++. ||||||||+|||++.++ ++||+|||+++......
T Consensus 125 GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---- 198 (362)
T KOG0192|consen 125 GSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---- 198 (362)
T ss_pred CcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc----
Confidence 999999988656679999999999999999999999874 99999999999999998 99999999998754321
Q ss_pred cccceecccccCCCcccccccc--cCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFL--THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
...+...||+.|||||++. ...|+.|+||||||+++|||+||+.||..... ...... ....+.++.
T Consensus 199 ---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~--------v~~~~~Rp~ 266 (362)
T KOG0192|consen 199 ---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASA--------VVVGGLRPP 266 (362)
T ss_pred ---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHH--------HHhcCCCCC
Confidence 2233467999999999999 56999999999999999999999999987655 221111 123445667
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
+|..++..+..++.+||+.+|..||++.+++..|+.+......
T Consensus 267 ~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 267 IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 7888999999999999999999999999999999988775543
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-45 Score=384.63 Aligned_cols=244 Identities=27% Similarity=0.430 Sum_probs=194.7
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCC-cEEEEEecC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-EQMLVYEFM 702 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-~~~LV~e~~ 702 (956)
.+..+.||+|..|+|||++++ +++.+|+|++... .....+++.+|++++++.+||+||++||.|..++ +..++||||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYM 160 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYM 160 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhc
Confidence 334678999999999999976 6899999999643 3344678999999999999999999999999988 599999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++|||++++... +.+++...-+|+.+|++||.|||+ ++ ||||||||+|||++..|+|||+|||.+..+...
T Consensus 161 DgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 161 DGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred CCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 999999999765 458899999999999999999996 66 999999999999999999999999999876422
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCch-hHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN-IVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
......||..|||||.+.+..|+.++||||||+.++|+.+|+.||..... ...+.. .+..++++..+
T Consensus 233 ------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~------Ll~~Iv~~ppP 300 (364)
T KOG0581|consen 233 ------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFE------LLCAIVDEPPP 300 (364)
T ss_pred ------hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHH------HHHHHhcCCCC
Confidence 34566799999999999999999999999999999999999999976411 111111 12234444444
Q ss_pred CCChH-HHHHHHHHHHHhcccCCCCCCCHH
Q 002178 861 SYPSE-CVEKFIKLALKCCQDETDARPSMS 889 (956)
Q Consensus 861 ~~~~~-~~~~l~~l~~~c~~~~p~~RPs~~ 889 (956)
..|++ +++++..++..|+++||.+||++.
T Consensus 301 ~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~ 330 (364)
T KOG0581|consen 301 RLPEGEFSPEFRSFVSCCLRKDPSERPSAK 330 (364)
T ss_pred CCCcccCCHHHHHHHHHHhcCCcccCCCHH
Confidence 55553 555555555555544444444333
No 6
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.3e-46 Score=369.05 Aligned_cols=283 Identities=26% Similarity=0.446 Sum_probs=223.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhh--HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|...+++|+|.||.||+|++ .+|+.||||+++.....+ .....+|++.|+.++|+||+.++++|.+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4688889999999999999995 579999999998654332 3577899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
||+ -+|+..++.+ ...++..+++.++.++++|++|||++. |+||||||.|+|++++|.+||+|||+|+.+..++
T Consensus 82 fm~-tdLe~vIkd~-~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~- 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIKDK-NIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN- 155 (318)
T ss_pred ecc-ccHHHHhccc-ccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC-
Confidence 996 5999999765 457899999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
...+...-|..|+|||.+.| ..|+..+||||.||++.||+-| .||..+++..++....+. .+
T Consensus 156 ------~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr-~P~fpG~sDidQL~~If~----------~L 218 (318)
T KOG0659|consen 156 ------RIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR-VPFFPGDSDIDQLSKIFR----------AL 218 (318)
T ss_pred ------cccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc-CCCCCCCchHHHHHHHHH----------Hc
Confidence 22333367889999999987 5699999999999999999987 466666665555554432 22
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH-hHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcccc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES-IWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~-~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+...++.++++..+ |++.++.+.-.. ....++.....+.||+.+|+++||.+|+||+|+|+||||++
T Consensus 219 GTP~~~~WP~~~~l------------pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 219 GTPTPDQWPEMTSL------------PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred CCCCcccCcccccc------------ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 33333333333222 122111100000 01145666677799999999999999999999999999987
Q ss_pred CCC
Q 002178 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
...
T Consensus 287 ~P~ 289 (318)
T KOG0659|consen 287 LPL 289 (318)
T ss_pred CCC
Confidence 544
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-45 Score=404.78 Aligned_cols=251 Identities=25% Similarity=0.444 Sum_probs=212.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.+|...+.||+|||++||.++. ..|+.||+|++..... ...+.+.+|+++.+.|+|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5788999999999999999997 7899999999876432 23567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|+|++++|..++++ +.++++.+++.+..||+.||.|||+++ |||||||..|++++++.+|||+|||+|..+..++
T Consensus 98 ELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 99999999999974 457999999999999999999999999 9999999999999999999999999999876442
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
......+|||.|+|||++....++..+||||+||++|-|+.|++||+...- .+
T Consensus 173 -------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-ke------------------- 225 (592)
T KOG0575|consen 173 -------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-KE------------------- 225 (592)
T ss_pred -------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-HH-------------------
Confidence 345677899999999999999999999999999999999999999974321 11
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
.++ |+..+--.+|+ .....+.++|++||+.||.+|||++++|.|+||
T Consensus 226 ----------ty~----~Ik~~~Y~~P~----------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 226 ----------TYN----KIKLNEYSMPS----------------HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred ----------HHH----HHHhcCccccc----------------ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 000 11111111221 123455689999999999999999999999999
No 8
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=397.85 Aligned_cols=288 Identities=22% Similarity=0.338 Sum_probs=232.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhH-HHHHHHHHHHHhcC-CCceeeeecccccCC-cEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGE-KEFLTEIQFLSRLH-HRNLVSLVGYCDEEG-EQML 697 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~-~~~L 697 (956)
..++|.+.++||.|+||.||+|+. .+|..||||+++..-...+ -.-++|++.|+++. ||||+++.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 457899999999999999999994 5799999999886443332 23478999999998 999999999998887 9999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||| ..+|+++++++ ...+++..++.|+.||++||+|+|++| +.|||+||+|||+.....+||+|||+|+....
T Consensus 88 VfE~M-d~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 88 VFEFM-DCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred eHHhh-hhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccccc
Confidence 99999 56999999887 678999999999999999999999999 99999999999999999999999999997653
Q ss_pred CCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
....+....|..|+|||++.. +-|+.+.||||+|||++|+.+-++.|.+.. ..++..... +
T Consensus 163 --------kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-E~Dqi~KIc------~--- 224 (538)
T KOG0661|consen 163 --------KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGAS-EIDQIYKIC------E--- 224 (538)
T ss_pred --------CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCc-HHHHHHHHH------H---
Confidence 234566778999999999865 679999999999999999999877775444 444433322 1
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
.+|....+.+.+-.+++..+--.-|..-|+- +...+|....++.+++..|+.|||++||||+|+|+||||
T Consensus 225 -VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~---------l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pff 294 (538)
T KOG0661|consen 225 -VLGTPDKDSWPEGYNLASAMNFRFPQVKPSP---------LKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFF 294 (538)
T ss_pred -HhCCCccccchhHHHHHHHhccCCCcCCCCC---------hHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence 2344444444444666666555555554432 223456677778899999999999999999999999999
Q ss_pred ccCCCC
Q 002178 937 SSDVSG 942 (956)
Q Consensus 937 ~~~~~~ 942 (956)
+...+.
T Consensus 295 q~~~~~ 300 (538)
T KOG0661|consen 295 QVGRAS 300 (538)
T ss_pred cccccc
Confidence 776653
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-45 Score=399.10 Aligned_cols=259 Identities=31% Similarity=0.511 Sum_probs=220.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..+.+...+.||+|.||.||.|.++....||+|.++..... .+.|.+|+++|++++|+|||+++|+|..++.++|||||
T Consensus 204 ~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~-~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~ 282 (468)
T KOG0197|consen 204 PREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS-PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEY 282 (468)
T ss_pred cHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC-hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEe
Confidence 33344456789999999999999987789999999876443 45899999999999999999999999998899999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
|+.|+|.++|+...+..+...+.+.++.|||+||+||++++ +|||||.++||||+++..+||+|||+|+......+.
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~ 359 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT 359 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCcee
Confidence 99999999999866778999999999999999999999999 999999999999999999999999999954433221
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
......-+..|.|||.+..+.++.|||||||||+||||+| |+.||....+. + .+..+-.+.+.
T Consensus 360 ------~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-e---------v~~~le~GyRl 423 (468)
T KOG0197|consen 360 ------ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-E---------VLELLERGYRL 423 (468)
T ss_pred ------ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-H---------HHHHHhccCcC
Confidence 1222234568999999999999999999999999999999 88888654331 1 11233445566
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+.|+.|++.+.++|..||+.+|++|||++.+...++++..
T Consensus 424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 7799999999999999999999999999999988887754
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.6e-45 Score=367.94 Aligned_cols=282 Identities=24% Similarity=0.354 Sum_probs=217.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
+.|+.+.++|+|+||+|||++.+ +|+.||||++.+... .-.+-.++|+++|++++|+|+|.++.+|......+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999976 599999999986433 234667899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
||+. ++.+-+.+.. ..++...+.+++.|+++|+.|+|+++ +|||||||+|||++.+|.+||||||.|+.+..+
T Consensus 82 ~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-- 154 (396)
T KOG0593|consen 82 YCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAP-- 154 (396)
T ss_pred ecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCC--
Confidence 9976 5555554433 34888999999999999999999999 999999999999999999999999999988632
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
....+....|..|+|||.+.+ .+|..++||||.||++.||++|.+.|....+..+...+.. .+
T Consensus 155 -----gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~k-----------tL 218 (396)
T KOG0593|consen 155 -----GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRK-----------TL 218 (396)
T ss_pred -----cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHH-----------HH
Confidence 234566778999999999998 7899999999999999999999877766555444332211 11
Q ss_pred CCCChHHHHHHHH--HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 860 GSYPSECVEKFIK--LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 860 ~~~~~~~~~~l~~--l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
+...+.-..-+.. ....-.-+.|+. ++.....+|.......||+..+|..||++|++.+|+|.||||.
T Consensus 219 G~L~prhq~iF~~N~~F~Gv~lP~~~~----------~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd 288 (396)
T KOG0593|consen 219 GNLIPRHQSIFSSNPFFHGVRLPEPEH----------PEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD 288 (396)
T ss_pred cccCHHHHHHhccCCceeeeecCCCCC----------ccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence 2221111110000 000001112221 2233345566666778999999999999999999999999994
Q ss_pred c
Q 002178 938 S 938 (956)
Q Consensus 938 ~ 938 (956)
+
T Consensus 289 ~ 289 (396)
T KOG0593|consen 289 G 289 (396)
T ss_pred H
Confidence 4
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-44 Score=374.70 Aligned_cols=269 Identities=25% Similarity=0.406 Sum_probs=211.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
..+|...+.||+|+||+||+|+++ ++..||||.+... .....+.+..|+++|+.++|||||.+++++..++..+|||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 357888889999999999999975 6899999998766 4445667889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC------CcEEEEeecccc
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK------FTAKVADFGLSR 773 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~------~~~kl~DfGla~ 773 (956)
|||.||+|.+|++.++ .+++..++.++.|+|.||++||+++ ||||||||.|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 9999999999998765 5899999999999999999999999 9999999999999765 569999999999
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
.+.. .......+|++.|||||+++.++|+.|+|+||.|+++|+|++|+.||...... +... .++..
T Consensus 164 ~L~~--------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~-eL~~-~~~k~---- 229 (429)
T KOG0595|consen 164 FLQP--------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPK-ELLL-YIKKG---- 229 (429)
T ss_pred hCCc--------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHH-HHHH-HHhcc----
Confidence 8863 23445678999999999999999999999999999999999999999754321 1111 11100
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
....+..+........++...-++.++.+|-.+.+ .|...++..+|.+|..+.++=.
T Consensus 230 --~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~--------------------~~~~~~l~~~p~~~~~~~~~~~ 286 (429)
T KOG0595|consen 230 --NEIVPVLPAELSNPLRELLISLLQRNPKDRISFED--------------------FFDHPFLAANPQDRADAFELES 286 (429)
T ss_pred --ccccCchhhhccCchhhhhhHHHhcCccccCchHH--------------------hhhhhhcccCcccccCcccccc
Confidence 01122334445555556666666666666655442 2444555666666655544433
No 12
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-44 Score=385.14 Aligned_cols=287 Identities=25% Similarity=0.370 Sum_probs=221.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccC--CcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~L 697 (956)
.+.|+.+++||+|+||.||+|+. .+|+.||+|++..+..+ ......+||.+|+++.||||+++.+...+. +.+||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 35677788999999999999994 57999999998765432 345668999999999999999999998665 78999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|+|||++ +|.-++.. ..-.|++.+++.+++|++.||+|+|.++ |+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999975 88888754 3446999999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. ....+...-|..|+|||++.+ ..|+.++|+||.|||+.||++|++.|.. ....++....+.
T Consensus 271 ~~------~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G-~tEveQl~kIfk--------- 334 (560)
T KOG0600|consen 271 SG------SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG-RTEVEQLHKIFK--------- 334 (560)
T ss_pred CC------CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC-ccHHHHHHHHHH---------
Confidence 43 223566778999999999998 4699999999999999999999877754 444555544332
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+...++++. ..++- .+....|. .+... .+.+. +...+..+++|+..||.+||++|.||+++|+|+||
T Consensus 335 -lcGSP~e~~W~-~~kLP-~~~~~kp~--~~y~r---~l~E~---~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 335 -LCGSPTEDYWP-VSKLP-HATIFKPQ--QPYKR---RLRET---FKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred -HhCCCChhccc-cccCC-cccccCCC--Ccccc---hHHHH---hccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 23444444444 22221 11111111 11111 11222 23335567899999999999999999999999999
Q ss_pred ccCCC
Q 002178 937 SSDVS 941 (956)
Q Consensus 937 ~~~~~ 941 (956)
..+..
T Consensus 404 ~t~p~ 408 (560)
T KOG0600|consen 404 TTEPL 408 (560)
T ss_pred ccCCC
Confidence 66554
No 13
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1e-43 Score=370.77 Aligned_cols=257 Identities=23% Similarity=0.386 Sum_probs=210.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
..++|++.++||+|+||+||.++.+ +++.+|+|++++.... ..+...+|..+|.+++||.||+++-.|++.+..||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3567999999999999999999965 5899999999865432 24567889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|+||+.||.|..+|++++ .+++..++-++..|+.||.|||+++ ||||||||+|||+|.+|.++|+|||+++..-.
T Consensus 103 Vld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999997655 4899999999999999999999999 99999999999999999999999999985432
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
. .......+||+.|||||++.+..|+..+|.||+|+++|||++|.+||...+. .+..+. +..+
T Consensus 178 ~-------~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~~~~---------I~~~ 240 (357)
T KOG0598|consen 178 D-------GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKMYDK---------ILKG 240 (357)
T ss_pred C-------CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHHHHH---------HhcC
Confidence 2 2234457899999999999999999999999999999999999999975432 111111 0000
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCccccccccCCCCCCCC----CCccCCC
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPP----SSSSMLK 932 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~----sa~e~L~ 932 (956)
.. ...|. .+..+.++++++|+.||++|. .++++-+
T Consensus 241 k~----------------------------------------~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~ 280 (357)
T KOG0598|consen 241 KL----------------------------------------PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKR 280 (357)
T ss_pred cC----------------------------------------CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhc
Confidence 00 11122 344556788888888888885 6778888
Q ss_pred CCccccCC
Q 002178 933 HPYVSSDV 940 (956)
Q Consensus 933 HP~f~~~~ 940 (956)
||||..-.
T Consensus 281 HpfF~~in 288 (357)
T KOG0598|consen 281 HPFFKGIN 288 (357)
T ss_pred CcccccCC
Confidence 99986543
No 14
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-44 Score=356.22 Aligned_cols=257 Identities=27% Similarity=0.449 Sum_probs=214.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeec-ccccCCc-EEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVG-YCDEEGE-QMLV 698 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~-~~LV 698 (956)
.+|++.++||+|.||+|||+. ..+|..||.|.++-+.. ...++...|+.+|++++|||||++++ .+.++.+ .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 357778899999999999998 56899999999885443 34567899999999999999999999 4555554 8999
Q ss_pred EecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcC-CCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 699 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEA-DPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
||||..|+|..+++. +.+..+++..+++++.|++.||.++|..- ...|+||||||.||+++.+|.|||+|||+++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999975 34567999999999999999999999832 123899999999999999999999999999988
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... ........|||.||+||.+.+.+|+.+|||||+||++|||+.-+.||... +...... ++.
T Consensus 179 ~s~-------~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~---------KI~ 241 (375)
T KOG0591|consen 179 SSK-------TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCK---------KIE 241 (375)
T ss_pred cch-------hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHH---------HHH
Confidence 643 23445678999999999999999999999999999999999999999765 3333222 334
Q ss_pred cCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 856 DGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 856 ~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
.+..++.| +.++..+..++..|+..||+.||+.-.+++.+..
T Consensus 242 qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 242 QGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred cCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 45566667 7889999999999999999999986555555543
No 15
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=364.65 Aligned_cols=286 Identities=24% Similarity=0.373 Sum_probs=226.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecC--CChhhHHHHHHHHHHHHhcCCCceeeeeccccc-----CC
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-----EG 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-----~~ 693 (956)
....|...+.||+|+||.|++|... +|+.||||++.. ......++..+|+++++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4456666789999999999999964 799999999873 445556788999999999999999999998854 35
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..|+|+|+| +-+|...++.+ ..++...+..+..|+++||.|+|+.+ |+|||+||+|++++.+..+||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEecccccee
Confidence 789999999 67999999654 34899999999999999999999999 9999999999999999999999999999
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
..... ......+....|..|+|||++.. ..|+.+.||||.|||+.||++|+..|.+ .+...+.+..
T Consensus 174 ~~~~~-----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG-~d~v~Ql~lI------- 240 (359)
T KOG0660|consen 174 YLDKF-----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPG-KDYVHQLQLI------- 240 (359)
T ss_pred ecccc-----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCC-CchHHHHHHH-------
Confidence 87543 12334566778999999999865 6899999999999999999999877754 4444444332
Q ss_pred hhccCCCCCCChHHHHHHH-HHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCC
Q 002178 853 SVIDGNMGSYPSECVEKFI-KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~-~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
-...+..+++....+. +-+...++..|...+. .+...+|..++.+.|++.+||++||.+|+||+|||
T Consensus 241 ---~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~---------~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL 308 (359)
T KOG0660|consen 241 ---LELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQ---------PFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEAL 308 (359)
T ss_pred ---HHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCC---------CHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHh
Confidence 2233445555444443 2222233333433221 12345688899999999999999999999999999
Q ss_pred CCCcccc
Q 002178 932 KHPYVSS 938 (956)
Q Consensus 932 ~HP~f~~ 938 (956)
+||||+.
T Consensus 309 ~hPYl~~ 315 (359)
T KOG0660|consen 309 AHPYLAP 315 (359)
T ss_pred cChhhhh
Confidence 9999964
No 16
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=6.4e-43 Score=356.35 Aligned_cols=286 Identities=24% Similarity=0.333 Sum_probs=217.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh--HHHHHHHHHHHHhcCCCceeeeecccc--cCCcEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQMLV 698 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~LV 698 (956)
++|+..++|++|+||.||+|+++ +++.||+|+++...... .-..++|+.+|.+.+|||||.+-.+.. +-+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 46778899999999999999965 68999999998543221 235589999999999999999988764 34579999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||||+. +|..+++.-. +++...+++.+..|+++|++|||... |+|||||++|+|++..|.+||+|||+|+.+..+
T Consensus 156 Me~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp 230 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSP 230 (419)
T ss_pred HHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCC
Confidence 999965 9999997654 67999999999999999999999999 999999999999999999999999999988654
Q ss_pred CCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
. ...+...-|..|+|||.+.+ ..|+.+.|+||+|||+.||+++++.|.. ....+++...+..
T Consensus 231 ~-------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G-~sE~dQl~~If~l--------- 293 (419)
T KOG0663|consen 231 L-------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG-KSEIDQLDKIFKL--------- 293 (419)
T ss_pred c-------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC-CchHHHHHHHHHH---------
Confidence 2 33466678999999999987 5699999999999999999999777654 4444555444322
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCC--CCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~--~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
++...+..++.+..+-.. + -..+|... ...|+ ..++.. .....+|++.+|++||++|+||+|+|+|+|
T Consensus 294 -lGtPte~iwpg~~~lp~~--k--~~~f~~~p--yn~lr---~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~ 363 (419)
T KOG0663|consen 294 -LGTPSEAIWPGYSELPAV--K--KMTFSEHP--YNNLR---KKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEY 363 (419)
T ss_pred -hCCCccccCCCccccchh--h--ccccCCCC--chhhh---hhccccccchhHHHHHHHHhccCccccccHHHhhcccc
Confidence 122222222222221100 0 00111100 11222 223333 366789999999999999999999999999
Q ss_pred cccCCC
Q 002178 936 VSSDVS 941 (956)
Q Consensus 936 f~~~~~ 941 (956)
|.....
T Consensus 364 F~e~P~ 369 (419)
T KOG0663|consen 364 FRETPL 369 (419)
T ss_pred cccCCC
Confidence 988544
No 17
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.7e-43 Score=398.01 Aligned_cols=262 Identities=31% Similarity=0.507 Sum_probs=223.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
..+....+.||+|+||+||+|+.. +...||||.+++.... ..++|++|++++..++|||||+|+|.|.+++.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 445555788999999999999843 3578999999987665 678999999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 696 MLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
++|+|||..|||.++|.... ..+++..+.+.||.|||.||+||-++. +|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence 99999999999999996431 223889999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~ 842 (956)
|||+|||+++..-..|++.. ...-.-..+|||||.|..++++.+||||||||+|||+++ |+.||..-.+. +
T Consensus 642 VKIsDfGLsRdiYssDYYk~-----~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--E- 713 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKV-----RGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--E- 713 (774)
T ss_pred EEecccccchhhhhhhhhcc-----cCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--H-
Confidence 99999999997765554432 112234579999999999999999999999999999999 99999765431 1
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002178 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
.+..+-.+...+.|+.|+.+++++|..||+..|.+||+++||-..|+++....
T Consensus 714 -------VIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 714 -------VIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred -------HHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 11223344556779999999999999999999999999999999999886543
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-42 Score=369.12 Aligned_cols=264 Identities=22% Similarity=0.320 Sum_probs=212.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHHHHhc-CCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|...+.||.|+|++|++|+.. .++.||||++.+.-... .+.+..|-.+|.+| .||.|++|+..|+++..+|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 456778889999999999999954 69999999987643322 34667888899999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|+||+++|+|.++|++.+ .+++...+.++.+|+.||+|||++| ||||||||+|||+|++|++||+|||.|+.+..
T Consensus 152 vLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred EEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 999999999999998764 5999999999999999999999999 99999999999999999999999999998865
Q ss_pred CCCC-----Cc-cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 778 PDIE-----GI-VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 778 ~~~~-----~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
.... .. .........+||..|.+||++.....+..+|+|+|||++|+|+.|.+||.......
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl------------ 294 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL------------ 294 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH------------
Confidence 4322 00 01111245789999999999999999999999999999999999999997544311
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCC
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
-+.+++. |-- ...+.-.+.+.|+++++|..||.+|++++|+-
T Consensus 295 -----------------iFqkI~~-l~y--------------------~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk 336 (604)
T KOG0592|consen 295 -----------------IFQKIQA-LDY--------------------EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIK 336 (604)
T ss_pred -----------------HHHHHHH-hcc--------------------cCCCCCCHHHHHHHHHHHccCccccccHHHHh
Confidence 1111111 000 01111123345788888999999999999999
Q ss_pred CCCccccCCC
Q 002178 932 KHPYVSSDVS 941 (956)
Q Consensus 932 ~HP~f~~~~~ 941 (956)
+||||.+--.
T Consensus 337 ~HpFF~~Vdw 346 (604)
T KOG0592|consen 337 AHPFFEGVDW 346 (604)
T ss_pred hCcccccCCh
Confidence 9999976544
No 19
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-42 Score=373.36 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=217.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
..|....+||+|+.|.||.|. ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...++.|.|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 456677899999999999998 4578999999998766666778899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
+||+|.|.+... .+++.++..|++++++||+|||.++ |+|||||.+|||++.+|.+||+|||++..+....
T Consensus 353 ~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~--- 423 (550)
T KOG0578|consen 353 EGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ--- 423 (550)
T ss_pred CCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc---
Confidence 999999998653 3899999999999999999999999 9999999999999999999999999998765322
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......||+.|||||+.....|+.++||||||++++||+-|.+||..+..+...+.+ .....+..
T Consensus 424 ----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI----------a~ng~P~l 489 (550)
T KOG0578|consen 424 ----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI----------ATNGTPKL 489 (550)
T ss_pred ----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH----------hhcCCCCc
Confidence 2456678999999999999999999999999999999999999999865443221111 11111100
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCCC
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
..+ +.....+.|||++||+.|+++|++|.|+|+||||.....-
T Consensus 490 --------------------k~~-----------------~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ 532 (550)
T KOG0578|consen 490 --------------------KNP-----------------EKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPE 532 (550)
T ss_pred --------------------CCc-----------------cccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCH
Confidence 011 1112334479999999999999999999999999766665
Q ss_pred Ccccc
Q 002178 943 SNLVS 947 (956)
Q Consensus 943 ~~~~~ 947 (956)
+.+++
T Consensus 533 ssL~p 537 (550)
T KOG0578|consen 533 SSLNP 537 (550)
T ss_pred HHhHH
Confidence 55443
No 20
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=339.43 Aligned_cols=199 Identities=25% Similarity=0.395 Sum_probs=180.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|+..+.||.|+||+|.+++.+ +|..+|+|++.....-. .+...+|-++|+.+.||.++++++.|.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46778899999999999999965 68999999998754433 345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||++||.|..++++.+ .+++..++.+|.||+.||+|||+.+ |++|||||+|||+|.+|.+||+|||.|+...
T Consensus 124 eyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~--- 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVS--- 195 (355)
T ss_pred eccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEec---
Confidence 9999999999997654 4999999999999999999999999 9999999999999999999999999998763
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCch
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~ 837 (956)
......+||+.|+|||++....+..++|.|||||++|||+.|..||.....
T Consensus 196 -------~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~ 246 (355)
T KOG0616|consen 196 -------GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP 246 (355)
T ss_pred -------CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence 235678899999999999999999999999999999999999999976543
No 21
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=3.2e-41 Score=363.64 Aligned_cols=256 Identities=27% Similarity=0.430 Sum_probs=212.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+... ...+.+.+|++++++++||||+.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57889999999999999999965 689999999875332 234678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+.| +|..++...+ .++++.+..|+.+++.||.|||+.+ |+|||+||.|||++..|.+|++|||+|+....
T Consensus 82 ~a~g-~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--- 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMST--- 152 (808)
T ss_pred hhhh-hHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhccc---
Confidence 9965 9999997654 4899999999999999999999999 99999999999999999999999999997653
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.....+.+.||+-|||||+..++.|+..+|.||+||++||+++|++||...
T Consensus 153 ----~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~------------------------- 203 (808)
T KOG0597|consen 153 ----NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR------------------------- 203 (808)
T ss_pred ----CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-------------------------
Confidence 245667889999999999999999999999999999999999999999532
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
.+.++++.-. .+|-.-|+ +....+..|++.+|..||..|+|=.+++.|||+.+..
T Consensus 204 --------si~~Lv~~I~-~d~v~~p~----------------~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~ 258 (808)
T KOG0597|consen 204 --------SITQLVKSIL-KDPVKPPS----------------TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI 258 (808)
T ss_pred --------HHHHHHHHHh-cCCCCCcc----------------cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence 1222222211 23322232 1122334678888889999999999999999987666
Q ss_pred CC
Q 002178 941 SG 942 (956)
Q Consensus 941 ~~ 942 (956)
.+
T Consensus 259 ~~ 260 (808)
T KOG0597|consen 259 NI 260 (808)
T ss_pred hh
Confidence 54
No 22
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.7e-41 Score=375.60 Aligned_cols=291 Identities=23% Similarity=0.344 Sum_probs=219.0
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-C-----CceeeeecccccCCcEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-H-----RNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~nIv~l~~~~~~~~~~~L 697 (956)
+|++.+.||+|+||.|-+|.+. +++.||||+++.... -..+...|+++|..++ | -|+|++++||...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 8999999999999999999964 699999999986433 3345677999999997 4 389999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC--CcEEEEeecccccc
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK--FTAKVADFGLSRLA 775 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~--~~~kl~DfGla~~~ 775 (956)
|+|.+ ..+|+++++.+....++...++.|+.||+.||.+||+.+ |||+||||+|||+.+- ..+||+|||.|+..
T Consensus 266 VfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccccc
Confidence 99999 679999999988888999999999999999999999999 9999999999999653 47999999999875
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.. .. .....+..|+|||++.+.+|+.+.||||||||+.||++|. |+..+++..+++....+
T Consensus 342 ~q---------~v-ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~-PLfpG~ne~DQl~~I~e-------- 402 (586)
T KOG0667|consen 342 SQ---------RV-YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGE-PLFPGDNEYDQLARIIE-------- 402 (586)
T ss_pred CC---------cc-eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCc-cccCCCCHHHHHHHHHH--------
Confidence 42 11 2556788999999999999999999999999999999994 55566666666554332
Q ss_pred cCCCCCCChHHHHHHHH---H-------HHHhcccCCCCCCCHHHHHHHHHHhHh-------------hCC-CCCCCCcc
Q 002178 856 DGNMGSYPSECVEKFIK---L-------ALKCCQDETDARPSMSEVMRELESIWN-------------MMP-ESDTKTPE 911 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~---l-------~~~c~~~~p~~RPs~~~v~~~L~~~~~-------------~~~-~~~~~~~~ 911 (956)
.++.+|..+.+...+ . ...|...+-.+-+...++...+..... ..+ ..+..+.|
T Consensus 403 --~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d 480 (586)
T KOG0667|consen 403 --VLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID 480 (586)
T ss_pred --HhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence 122222222221111 1 111222221111111122222211111 111 23344578
Q ss_pred ccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 912 FINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 912 ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
|+.+||.|||.+|+|+.|||+||||+....
T Consensus 481 flk~~L~~dP~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 481 FLKRCLEWDPAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred HHHHHhccCchhcCCHHHHhcCcccccccc
Confidence 999999999999999999999999985443
No 23
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8e-41 Score=365.75 Aligned_cols=268 Identities=25% Similarity=0.466 Sum_probs=220.4
Q ss_pred cHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002178 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 615 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
+.+++.+..+.+.+...||+|.||+||+|.|.. .||||+++.... ...+.|.+|+..+++-+|.||+-|+|||..+
T Consensus 383 s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 383 SLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred cccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence 336667777778888999999999999999864 699999986543 3457899999999999999999999999988
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
.. .+|+.+|+|.+|+.++|... ..++..+.+.||+|||+|+.|||.++ |||||||..||++.+++.|||+|||++
T Consensus 461 ~~-AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 461 PL-AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ce-eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccce
Confidence 77 99999999999999998754 56999999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
..-..- ..........|...|||||+++. .+|++.+|||||||++|||+||..||. ..+.. .
T Consensus 536 tvk~~w-----~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~d---------q 600 (678)
T KOG0193|consen 536 TVKTRW-----SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRD---------Q 600 (678)
T ss_pred eeeeee-----ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChh---------h
Confidence 753321 11222334457889999999974 478999999999999999999999997 33321 1
Q ss_pred cchhhccCC----CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC
Q 002178 850 MMFSVIDGN----MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE 904 (956)
Q Consensus 850 ~~~~~~~~~----~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~ 904 (956)
.++.+-.+. +-.....++.++.+++..||..++++||.+.+++..|+.+....|.
T Consensus 601 IifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pk 659 (678)
T KOG0193|consen 601 IIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPK 659 (678)
T ss_pred eEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccc
Confidence 222222221 1223467888999999999999999999999999988887665444
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=351.01 Aligned_cols=274 Identities=25% Similarity=0.330 Sum_probs=212.3
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhh-HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
..+.|++.+.||.|..++||+|+ .+.+..||||++.-+.... .+.+.+|+..|+.++||||++++..|..+.+.|+||
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVm 103 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVM 103 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEee
Confidence 34678899999999999999999 4578999999998654443 478899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
.||.+||+.+.++..-...+++..+..|.+++++||.|||++| .||||||+.|||++++|.|||+|||.+..+....
T Consensus 104 pfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 104 PFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999999998877777999999999999999999999999 9999999999999999999999999976654322
Q ss_pred CCCccccceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
... ........||+.|||||+++. ..|+.|+||||||++..|+.+|+.||..-..+.-... .+.+
T Consensus 181 --~R~-~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~----------tLqn 247 (516)
T KOG0582|consen 181 --DRQ-VTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLL----------TLQN 247 (516)
T ss_pred --cee-eEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHH----------HhcC
Confidence 111 111156789999999999654 5799999999999999999999999975433211111 1111
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
..+.. . ......++. . .-...+..++..+|+.||++||||+++|+|+||.
T Consensus 248 ~pp~~-~------------------t~~~~~d~~----k-------~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk 297 (516)
T KOG0582|consen 248 DPPTL-L------------------TSGLDKDED----K-------KFSKSFREMIALCLVKDPSKRPTASKLLKHAFFK 297 (516)
T ss_pred CCCCc-c------------------cccCChHHh----h-------hhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence 11100 0 000000000 0 0011334677778888888888888888888887
Q ss_pred cCCC
Q 002178 938 SDVS 941 (956)
Q Consensus 938 ~~~~ 941 (956)
....
T Consensus 298 ~~k~ 301 (516)
T KOG0582|consen 298 KAKS 301 (516)
T ss_pred hccc
Confidence 6655
No 25
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2e-41 Score=377.98 Aligned_cols=270 Identities=28% Similarity=0.478 Sum_probs=227.3
Q ss_pred cccHHHHHHHhcCC---------CCCCeeeeeCCeEEEEEEeC----CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcC
Q 002178 613 SFTYGEMALATNNF---------NSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLH 678 (956)
Q Consensus 613 ~~~~~~~~~~~~~y---------~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~ 678 (956)
.++|+|...+-..| .+.++||.|.||.||+|.++ ....||||.++....+ ...+|+.|+.+|.++.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 46777766655444 45789999999999999975 2467999999976544 4578999999999999
Q ss_pred CCceeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002178 679 HRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 679 h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
||||++|.|+.......++|+|||+||+|+.+|+.+.. .+.+.+...+.++||.|+.||-+++ +|||||.++|||+
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILV 764 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILV 764 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheee
Confidence 99999999999999999999999999999999987764 4999999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCch
Q 002178 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 837 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~ 837 (956)
+.+..+||+|||+++.+..+. .. ......-.-..+|.|||.+...+++.+|||||||++|||.++ |.+||.+-.+
T Consensus 765 NsnLvCKVsDFGLSRvledd~-~~---~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN 840 (996)
T KOG0196|consen 765 NSNLVCKVSDFGLSRVLEDDP-EA---AYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 840 (996)
T ss_pred ccceEEEeccccceeecccCC-Cc---cccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch
Confidence 999999999999999875432 11 111112223468999999999999999999999999999887 9999976443
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
. +.+..+.++.+.+.|.+|+..+.++|..||++|-.+||.+.+++..|.++..
T Consensus 841 Q----------dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 841 Q----------DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred H----------HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 1 1222344555677899999999999999999999999999999999988754
No 26
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.3e-41 Score=350.91 Aligned_cols=294 Identities=24% Similarity=0.368 Sum_probs=223.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCc-eeeeecccccCC-----
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRN-LVSLVGYCDEEG----- 693 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~n-Iv~l~~~~~~~~----- 693 (956)
...|+..++||+|+||+||+|+.+ +|+.||+|++...... ......+|+.++++++|+| |+++++++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345666788999999999999954 7899999998764432 2356789999999999999 999999997766
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCC--CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002178 694 -EQMLVYEFMSNGTLRDQLSAKSK--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 694 -~~~LV~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
..++||||+ .-+|.+++..... ..++...++.++.||++||+|||+++ |+||||||.|||++++|.+||+|||
T Consensus 90 ~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccc
Confidence 788999999 5699999987553 35677889999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
+|+....+ ....+...+|..|+|||++.+. .|+...||||+||+++||++++..|....+ .++....+..
T Consensus 166 lAra~~ip-------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~- 236 (323)
T KOG0594|consen 166 LARAFSIP-------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRL- 236 (323)
T ss_pred hHHHhcCC-------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHH-
Confidence 99965432 3345667899999999999986 799999999999999999998777765544 4433333321
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
++...++.++.+..+... +.....++....+ ....+..+....+++.+||+++|++|+||+.
T Consensus 237 ---------lGtP~e~~Wp~v~~~~~~--k~~f~~~~~~~~l-------~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~ 298 (323)
T KOG0594|consen 237 ---------LGTPNEKDWPGVSSLPDY--KAPFPKWPGPKDL-------SSILPKLDPDGIELLSKLLQYDPAKRISAKG 298 (323)
T ss_pred ---------cCCCCccCCCCccccccc--cccCcCCCCccch-------HHhccccCccHHHHHHHHhccCcccCcCHHH
Confidence 122222222222222111 0011112222222 2334555677889999999999999999999
Q ss_pred CCCCCccccCCCCCcccc
Q 002178 930 MLKHPYVSSDVSGSNLVS 947 (956)
Q Consensus 930 ~L~HP~f~~~~~~~~~~~ 947 (956)
+|.||||.........+.
T Consensus 299 al~h~yf~~~~~~~~~~~ 316 (323)
T KOG0594|consen 299 ALTHPYFSELPEKSSQLL 316 (323)
T ss_pred HhcChhhcccccchhhhh
Confidence 999999988766544433
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=368.23 Aligned_cols=255 Identities=26% Similarity=0.378 Sum_probs=207.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCC----Ch-hhHHHHHHHHHHHHhcC-CCceeeeecccccCC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG----SL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEG 693 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~ 693 (956)
...++|.+.+.||+|+||+|+.|.. .+++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999985 47899999977653 11 23456678999999999 999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeeccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 772 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla 772 (956)
..++||||+.+|+|.+++.. ..++.+.+...++.|++.|++|||+++ |+||||||+|||++.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999987 345888999999999999999999999 9999999999999999 99999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCC-CC-CcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
..... ........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||.+.....- ...
T Consensus 169 ~~~~~-------~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l-~~k------ 234 (370)
T KOG0583|consen 169 AISPG-------EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNL-YRK------ 234 (370)
T ss_pred cccCC-------CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHH-HHH------
Confidence 87631 123456678999999999999977 86 679999999999999999999976322110 000
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCC--CCCCccccccccCCCCCCCCCCc
Q 002178 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~--~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
+....- .+|.. ...+.+++++||..||.+|+|++
T Consensus 235 ----i~~~~~----------------------------------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~ 270 (370)
T KOG0583|consen 235 ----IRKGEF----------------------------------------KIPSYLLSPEARSLIEKMLVPDPSTRITLL 270 (370)
T ss_pred ----HhcCCc----------------------------------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHH
Confidence 000000 11211 34445788888999999999999
Q ss_pred cCCCCCcccc
Q 002178 929 SMLKHPYVSS 938 (956)
Q Consensus 929 e~L~HP~f~~ 938 (956)
|+++||||..
T Consensus 271 ~i~~h~w~~~ 280 (370)
T KOG0583|consen 271 EILEHPWFQK 280 (370)
T ss_pred HHhhChhhcc
Confidence 9999999987
No 28
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.2e-40 Score=356.09 Aligned_cols=269 Identities=22% Similarity=0.301 Sum_probs=210.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
...++|+++..||+|+||.||+|+-+ +|.++|+|++++..... .+.+..|-.+|....+|+||+++-.|++.+.+|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 34588999999999999999999965 69999999998765443 345678889999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
|||||++||++..+|... ..+++..++.++.+++.|++-+|+.| +|||||||+|+|||..|++||+|||++.-+.
T Consensus 218 LiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 999999999999999764 46899999999999999999999999 9999999999999999999999999985432
Q ss_pred CCCCCC------------------ccc-----cc-----------------eecccccCCCcccccccccCCCCCcccch
Q 002178 777 VPDIEG------------------IVP-----AH-----------------VSTVVKGTPGYLDPEYFLTHKLTDKSDVY 816 (956)
Q Consensus 777 ~~~~~~------------------~~~-----~~-----------------~~~~~~gt~~y~aPE~~~~~~~~~~sDVw 816 (956)
...... ..+ .. ......|||.|||||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 210000 000 00 01124699999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 817 SLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 817 S~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
|+|||+|||+.|.+||........+.+.. .- ..||..-++.+.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~--------------------------nw-r~~l~fP~~~~~---------- 415 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIV--------------------------NW-RETLKFPEEVDL---------- 415 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHH--------------------------HH-hhhccCCCcCcc----------
Confidence 99999999999999998655432222211 00 112222222221
Q ss_pred HhHhhCCCCCCCCccccccccCCCCCCCCC---CccCCCCCccccCCC
Q 002178 897 SIWNMMPESDTKTPEFINSEHTSKEETPPS---SSSMLKHPYVSSDVS 941 (956)
Q Consensus 897 ~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s---a~e~L~HP~f~~~~~ 941 (956)
.+++.|||.++|. ||++|+- ++|+-+||||..-.-
T Consensus 416 ---------s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W 453 (550)
T KOG0605|consen 416 ---------SDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDW 453 (550)
T ss_pred ---------cHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence 2345578888888 8888864 788999999976544
No 29
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-40 Score=349.24 Aligned_cols=203 Identities=31% Similarity=0.498 Sum_probs=172.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC--cEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~LV~e 700 (956)
.++...+.||+|+||+||++... +|+..|||..........+.+.+|+++|++++|||||+++|...... .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35666789999999999999965 49999999887653333567889999999999999999999854444 6899999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccccCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~ 779 (956)
|+++|+|.+++.+.+. .+++..++.++.||++||+|||+++ ||||||||+|||++. ++.+||+|||+++......
T Consensus 97 y~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 9999999999988766 7999999999999999999999999 999999999999999 7999999999998765310
Q ss_pred CCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
..........||+.|||||++..+ ....++||||+||++.||+||+.||..
T Consensus 173 ----~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~ 224 (313)
T KOG0198|consen 173 ----TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSE 224 (313)
T ss_pred ----ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchh
Confidence 012233457799999999999963 334599999999999999999999964
No 30
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=331.58 Aligned_cols=259 Identities=23% Similarity=0.369 Sum_probs=209.0
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.+++|++.+.||+|.|+.||++.. .+|+.+|+|++.... ..+.+++.+|+++-+.++||||+++.+.+.+.+..|+|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 356788889999999999999985 479999999876432 22456889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeecccccc
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGla~~~ 775 (956)
+|+|+|++|..-+-.+ ..+++..+-..++||+++|.|+|.++ |||||+||+|+++.+ ..-+||+|||+|..+
T Consensus 89 Fe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred EecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 9999999997766443 45788889999999999999999999 999999999999954 346999999999877
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.. ........||++|||||++...+|+.++|||+.||+||-++.|+.||.+.+.. +..+
T Consensus 164 ~~--------g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~-rlye------------ 222 (355)
T KOG0033|consen 164 ND--------GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYE------------ 222 (355)
T ss_pred CC--------ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH-HHHH------------
Confidence 52 12234567999999999999999999999999999999999999999764321 1110
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
+++..-...++. .++...+++.+++++||+.||.+|+||.|+|+|||
T Consensus 223 ----------------~I~~g~yd~~~~-----------------~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW 269 (355)
T KOG0033|consen 223 ----------------QIKAGAYDYPSP-----------------EWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW 269 (355)
T ss_pred ----------------HHhccccCCCCc-----------------ccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence 111111111111 22344556678999999999999999999999999
Q ss_pred cccC
Q 002178 936 VSSD 939 (956)
Q Consensus 936 f~~~ 939 (956)
+...
T Consensus 270 i~~r 273 (355)
T KOG0033|consen 270 ICNR 273 (355)
T ss_pred hcch
Confidence 8653
No 31
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-41 Score=348.11 Aligned_cols=275 Identities=22% Similarity=0.328 Sum_probs=203.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCC-----cEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQMLV 698 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~LV 698 (956)
.|...+++|.|+||.||+|+.. +++.||||+.-.+... -.+|+++|+++.|||||++.-+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4566789999999999999965 5799999987653322 235999999999999999998874322 44689
Q ss_pred EecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeecccccc
Q 002178 699 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLA 775 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla~~~ 775 (956)
||||+ -+|++.++. ..+..++...++-+..||.+||+|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 99996 599999874 23456788888899999999999999988 9999999999999976 99999999999987
Q ss_pred CCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
.... .......|..|+|||.+.+ ..|+.+.||||.||++.||+-|+..|... +..++......
T Consensus 177 ~~~e--------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik------- 240 (364)
T KOG0658|consen 177 VKGE--------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIK------- 240 (364)
T ss_pred ccCC--------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHH-------
Confidence 5432 2345668899999999987 56999999999999999999998777654 33333332211
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 855 IDGNMGSYPSECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~--p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
.++....+.... ++.+ -.+-|.+.... ..+ -.....++++.+|+.++|+++|.+|.++.|+|.
T Consensus 241 ---~lG~Pt~e~I~~--------mn~~y~~~~~p~ik~~~--~~~--~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 241 ---VLGTPTREDIKS--------MNPNYTEFKFPQIKAHP--WHK--VFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ---HhCCCCHHHHhh--------cCcccccccCccccccc--cee--ecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 122222222111 1111 11111111110 000 122345677789999999999999999999999
Q ss_pred CCcccc
Q 002178 933 HPYVSS 938 (956)
Q Consensus 933 HP~f~~ 938 (956)
||||..
T Consensus 306 h~fFde 311 (364)
T KOG0658|consen 306 HPFFDE 311 (364)
T ss_pred chhhHH
Confidence 999954
No 32
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.2e-39 Score=371.30 Aligned_cols=282 Identities=20% Similarity=0.249 Sum_probs=214.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|++.+.||+|+||.||+|... +++.||+|.... ..+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 357999999999999999999964 689999996542 3567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+ +++|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+|+......
T Consensus 165 ~-~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~-- 236 (391)
T PHA03212 165 Y-KTDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN-- 236 (391)
T ss_pred C-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc--
Confidence 9 57999988654 34788999999999999999999998 9999999999999999999999999997532211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchh------HHHHHHHhhcccchhhc
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI------VREVNIAYQSSMMFSVI 855 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~------~~~~~~~~~~~~~~~~~ 855 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ...
T Consensus 237 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~------~~~ 306 (391)
T PHA03212 237 ----ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLII------RRS 306 (391)
T ss_pred ----ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHH------HHh
Confidence 11223456999999999999999999999999999999999999888643221 11111111 111
Q ss_pred cCCCCCCCh---HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 856 DGNMGSYPS---ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 856 ~~~~~~~~~---~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
......++. ........-...+....|..||....+... .....+++.+||.+||++||||+|+|+
T Consensus 307 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 307 GTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYEL-----------PIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred cCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhh-----------hhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 100111121 111222222234455667778776544321 123457999999999999999999999
Q ss_pred CCccccC
Q 002178 933 HPYVSSD 939 (956)
Q Consensus 933 HP~f~~~ 939 (956)
||||..-
T Consensus 376 hp~f~~~ 382 (391)
T PHA03212 376 FAAFQDI 382 (391)
T ss_pred ChhhccC
Confidence 9999763
No 33
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1e-39 Score=357.98 Aligned_cols=281 Identities=23% Similarity=0.345 Sum_probs=208.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.++||+|+||+||+|..+ +++.||+|.++.... .....+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56889999999999999999965 689999999875332 2345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ |+|.+++.... ..+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG-NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CC-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 96 59999886543 35788899999999999999999999 9999999999999999999999999997643221
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||...... +....... ..+
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~----------~~~ 221 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-EELHLIFR----------LLG 221 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH----------HhC
Confidence 11223457899999999875 56899999999999999999999999754322 21111110 011
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+.+.+..+.......-...|..|+.. .....+..+....+|+++||++||.+|+|++|+|+||||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 222 TPTEETWPGITSNEEFRSYLFPQYRAQP---------LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred CCChHHhhccccchhhhccccCccCCCc---------hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 1122222111110000000111112111 011223445567799999999999999999999999998
No 34
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.8e-40 Score=362.27 Aligned_cols=255 Identities=27% Similarity=0.386 Sum_probs=210.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
-|+..+.||+|+.|.|..|+. .+|+.+|||++...... ....+.+|+-+|+-+.||||+++|+++++..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 466778899999999999995 57999999999865221 23467899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++|-|.+++-.++ ++.+.+..+++.||+.|+.|+|..+ |+|||+||+|+|+|..+++||+|||+|.....
T Consensus 93 yv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~--- 164 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVP--- 164 (786)
T ss_pred ecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccC---
Confidence 999999999997754 5889999999999999999999999 99999999999999999999999999987542
Q ss_pred CCccccceecccccCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......+|++.|.|||++++.+|. .++||||.|||||.|+||+.||+++ +....+... + .|.
T Consensus 165 -----gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-Nir~LLlKV-~--------~G~- 228 (786)
T KOG0588|consen 165 -----GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-NIRVLLLKV-Q--------RGV- 228 (786)
T ss_pred -----CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-cHHHHHHHH-H--------cCc-
Confidence 3345567899999999999999885 5799999999999999999999743 222211111 0 000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccC
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
+.+......++-++|++||.+||++|+|.+|+++|||+..-
T Consensus 229 ---------------------------------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~ 269 (786)
T KOG0588|consen 229 ---------------------------------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY 269 (786)
T ss_pred ---------------------------------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence 11111223444589999999999999999999999999776
Q ss_pred CCC
Q 002178 940 VSG 942 (956)
Q Consensus 940 ~~~ 942 (956)
...
T Consensus 270 ~~~ 272 (786)
T KOG0588|consen 270 TSL 272 (786)
T ss_pred CCC
Confidence 654
No 35
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.5e-39 Score=353.14 Aligned_cols=200 Identities=27% Similarity=0.418 Sum_probs=174.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.|+..+.||+|+||+||+|.. .+|+.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999996 4799999998865332 223467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 999999999887655556899999999999999999999999 9999999999999999999999999997653211
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......||..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~ 204 (285)
T cd05631 157 -------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKR 204 (285)
T ss_pred -------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCC
Confidence 122346899999999999999999999999999999999999999754
No 36
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.9e-39 Score=361.94 Aligned_cols=263 Identities=27% Similarity=0.464 Sum_probs=209.8
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEe------CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeecccccC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 692 (956)
...++|++.++||+|+||.||+|.+ .+++.||||+++.... ...+.+.+|+++++++ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 4567899999999999999999974 2357899999875432 3346789999999999 899999999988654
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 002178 693 -GEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 715 (956)
Q Consensus 693 -~~~~LV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 715 (956)
+..++||||+++|+|.+++....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 46899999999999999987532
Q ss_pred ----CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecc
Q 002178 716 ----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTV 791 (956)
Q Consensus 716 ----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~ 791 (956)
..++++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++....... ......
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~ 235 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGS 235 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccC
Confidence 134778889999999999999999998 99999999999999999999999999986532210 011123
Q ss_pred cccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHH
Q 002178 792 VKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKF 870 (956)
Q Consensus 792 ~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 870 (956)
..++..|+|||++.+..++.++|||||||++|||++ |..||........... .+..+.....+..++..+
T Consensus 236 ~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l 306 (338)
T cd05102 236 ARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQ---------RLKDGTRMRAPENATPEI 306 (338)
T ss_pred CCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHH---------HHhcCCCCCCCCCCCHHH
Confidence 346678999999999999999999999999999997 9999975432211111 111222333455667889
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 871 IKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 871 ~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+++.+||+.+|.+||++.++++.|+++..
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 999999999999999999999999997653
No 37
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-40 Score=324.59 Aligned_cols=254 Identities=26% Similarity=0.417 Sum_probs=213.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
-++|++.+.||+|.||.||.|+.+ ++-.||+|++.+.... -+.++.+|+++-+.++||||+++++||.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 467889999999999999999954 6889999998754332 256889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
+||.++|++...|.......+++.....++.|+|.||.|+|..+ ||||||||+|+|++.++..||+|||-+...+
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP-- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC--
Confidence 99999999999999777778999999999999999999999998 9999999999999999999999999987543
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......+||..|.+||...+..++..+|+|++|++.||++.|.+||.....
T Consensus 176 -------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--------------------- 227 (281)
T KOG0580|consen 176 -------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--------------------- 227 (281)
T ss_pred -------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh---------------------
Confidence 3345677899999999999999999999999999999999999999964321
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
.+..+.+.+..-.+|. ....+.|+|.++|..+|.+|.+-.|+++|||+.
T Consensus 228 ------------------------------~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~ 277 (281)
T KOG0580|consen 228 ------------------------------SETYKRIRKVDLKFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIV 277 (281)
T ss_pred ------------------------------HHHHHHHHHccccCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence 1111111111112221 234456788888999999999999999999986
Q ss_pred cC
Q 002178 938 SD 939 (956)
Q Consensus 938 ~~ 939 (956)
..
T Consensus 278 a~ 279 (281)
T KOG0580|consen 278 AN 279 (281)
T ss_pred hc
Confidence 54
No 38
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=2.3e-40 Score=333.88 Aligned_cols=298 Identities=25% Similarity=0.361 Sum_probs=216.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC---C--CcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeeccccc-CC
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP---D--GTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 693 (956)
....|+....||+|.||.||+|.-. + .+.+|+|+++..... -.....+|+.+++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457889999999999999999643 2 237999999865322 13567899999999999999999999866 77
Q ss_pred cEEEEEecCCCCCHHHHHhhc---CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC----CcEEE
Q 002178 694 EQMLVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKV 766 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~----~~~kl 766 (956)
..++++||.+. +|.+.++-+ ....++...++.|..||+.|+.|||++- |+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEe
Confidence 89999999975 999988643 2246888999999999999999999999 9999999999999877 89999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002178 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
+|||+|+.+..+-. +-.....+..|..|+|||.+.+ ..||.+.||||.||++.||+|-.+.|...+...+. ...
T Consensus 178 aDlGlaR~~~~plk----pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~-~~P 252 (438)
T KOG0666|consen 178 ADLGLARLFNNPLK----PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKT-KNP 252 (438)
T ss_pred ecccHHHHhhcccc----ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhccc-CCC
Confidence 99999998865431 1223345678899999999998 46999999999999999999987777543211000 001
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH----------HHHhHhhCCCCCCCCcccccc
Q 002178 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE----------LESIWNMMPESDTKTPEFINS 915 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~----------L~~~~~~~~~~~~~~~~ll~~ 915 (956)
++...+..++. .++...++.++.+.+. |.....+.. |-.+.......++.+.+++.+
T Consensus 253 fq~dQl~rIf~-vLG~Pt~~~Wp~lkk~------------Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~k 319 (438)
T KOG0666|consen 253 FQHDQLDRIFE-VLGTPTDKDWPDLKKM------------PEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQK 319 (438)
T ss_pred chHHHHHHHHH-HcCCCccccchhhhhC------------cchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHH
Confidence 11111111110 1122222222222111 222222222 223333344456778999999
Q ss_pred ccCCCCCCCCCCccCCCCCccccCCC
Q 002178 916 EHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 916 ~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
||++||.+|+||++||+|+||+++.-
T Consensus 320 lL~yDP~kRIta~qAleh~yF~~d~l 345 (438)
T KOG0666|consen 320 LLTYDPIKRITAEQALEHPYFTEDPL 345 (438)
T ss_pred HhccCchhhccHHHHhcccccccCCC
Confidence 99999999999999999999998843
No 39
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-40 Score=353.12 Aligned_cols=239 Identities=29% Similarity=0.515 Sum_probs=205.2
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHH
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 708 (956)
++-||.|+-|.||+|+++ ++.||||+++.- -..+++-|++|+|+||+.|.|+|.....+|||||||..|-|+
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~el-------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVREL-------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhh-------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 567999999999999985 578999987642 134788999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccce
Q 002178 709 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 788 (956)
Q Consensus 709 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 788 (956)
..|+.. .++.......+.++||.|+.|||.+. |||||||+-||||+.+..|||+|||-++.... ...
T Consensus 201 ~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~--------~ST 267 (904)
T KOG4721|consen 201 EVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSD--------KST 267 (904)
T ss_pred HHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhh--------hhh
Confidence 999764 45778888999999999999999999 99999999999999999999999999987642 223
Q ss_pred ecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC-CCCChHHH
Q 002178 789 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM-GSYPSECV 867 (956)
Q Consensus 789 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 867 (956)
....+||..|||||++...++++|+|||||||+||||+||..||.+.+. ...++.+-...+ .+.|..|+
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVds----------sAIIwGVGsNsL~LpvPstcP 337 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDS----------SAIIWGVGSNSLHLPVPSTCP 337 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccch----------heeEEeccCCcccccCcccCc
Confidence 4567899999999999999999999999999999999999999975432 122333322222 35689999
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 868 EKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 868 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+.+.-+++.||+..|..||++.+++..|+-.
T Consensus 338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred hHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 9999999999999999999999999988743
No 40
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-39 Score=382.75 Aligned_cols=261 Identities=32% Similarity=0.537 Sum_probs=218.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC--Cc----EEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD--GT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
..+.+..+.||+|+||.||.|...+ |. .||||.++... .+...+|.+|..+|++++|||||+++|+|.+.+..
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 4455667889999999999999643 43 48999988754 45568999999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhc-----CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002178 696 MLVYEFMSNGTLRDQLSAK-----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
++++|||++|+|..+|++. ....++..+.+.++.|||+|+.||++++ +|||||.++|+|++....|||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 9999999999999999864 1345888999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 849 (956)
+|+.....+++... ....-...|||||.+..+.++.|+|||||||++||++| |..||....+..
T Consensus 848 lArDiy~~~yyr~~-----~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~---------- 912 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKH-----GEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFE---------- 912 (1025)
T ss_pred hhHhhhhchheecc-----CccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHH----------
Confidence 99955443332111 11123468999999999999999999999999999999 889997655421
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.+..+..+.+...|..|++.++++|..||+.+|++||++..+++.+..+.+.
T Consensus 913 v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~ 964 (1025)
T KOG1095|consen 913 VLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNA 964 (1025)
T ss_pred HHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhh
Confidence 1122334446678999999999999999999999999999999988887654
No 41
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.4e-39 Score=352.09 Aligned_cols=278 Identities=24% Similarity=0.351 Sum_probs=206.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC--CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhc---CCCceeeeecccc-----c
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRL---HHRNLVSLVGYCD-----E 691 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~nIv~l~~~~~-----~ 691 (956)
++|++.+.||+|+||+||+|... +++.||+|.++.... .....+.+|+++++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 47899999999999999999863 478899998864322 1234566777777665 6999999999874 3
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
....++||||++ ++|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 456899999995 69999998765566899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
++..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||....+.... ...
T Consensus 157 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~-~~i------ 221 (290)
T cd07862 157 ARIYSFQ--------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQL-GKI------ 221 (290)
T ss_pred eEeccCC--------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHH-HHH------
Confidence 9765322 1223456899999999999889999999999999999999999999765442221 111
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCC
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
++......+.+++... .+...++...+.. ... +..+..+....+++.+||+.||++|||+.|+|
T Consensus 222 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 222 ---LDVIGLPGEEDWPRDV-ALPRQAFHSKSAQ--PIE----------KFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred ---HHHhCCCChhhchhhh-cccchhccCCCCC--CHH----------HHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 1100011112221111 1222222222111 111 12234455567899999999999999999999
Q ss_pred CCCcc
Q 002178 932 KHPYV 936 (956)
Q Consensus 932 ~HP~f 936 (956)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99998
No 42
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6.2e-39 Score=351.64 Aligned_cols=284 Identities=21% Similarity=0.277 Sum_probs=209.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|++.+.||+|+||+||+|+.+ +++.||+|++..... ...+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999975 688999999875322 234577899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++++.+..+... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 154 (287)
T cd07848 81 YVEKNMLELLEEM--PNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS- 154 (287)
T ss_pred cCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc-
Confidence 9988777655432 245888899999999999999999998 9999999999999999999999999998754221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
........|+..|+|||++.+..++.++|||||||++|||++|+.||............ ....+
T Consensus 155 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~-----------~~~~~ 218 (287)
T cd07848 155 -----NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTI-----------QKVLG 218 (287)
T ss_pred -----cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH-----------HHhhC
Confidence 11122346899999999999989999999999999999999999999764432221111 01112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+.+....+..- ........|........-.. .....+..+.+|+.+||+.||++|+|++|+|+||||
T Consensus 219 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 219 PLPAEQMKLFYSN----PRFHGLRFPAVNHPQSLERR---YLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred CCCHHHHHhhhcc----chhcccccCcccCcccHHHh---hhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 2233222211110 00000011111000000000 111234456789999999999999999999999998
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.6e-39 Score=354.17 Aligned_cols=197 Identities=24% Similarity=0.362 Sum_probs=173.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47889999999999999999975 68999999986432 223456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC-
Confidence 9999999999997643 5888999999999999999999999 999999999999999999999999999765321
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~ 201 (291)
T cd05612 155 ---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDD 201 (291)
T ss_pred ---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 12345899999999999989999999999999999999999999654
No 44
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-39 Score=357.39 Aligned_cols=269 Identities=30% Similarity=0.480 Sum_probs=221.8
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCC--C--cE-EEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeee
Q 002178 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILPD--G--TV-VAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSL 685 (956)
Q Consensus 614 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~--~--~~-vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l 685 (956)
+..+.++...++-...++||+|+||.||+|.+.. + .. ||||..+.. .....++|.+|+++|+.++|||||++
T Consensus 147 I~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~ 226 (474)
T KOG0194|consen 147 IPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRF 226 (474)
T ss_pred ccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3344555566666677999999999999999643 2 23 899998852 34556799999999999999999999
Q ss_pred ecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEE
Q 002178 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (956)
Q Consensus 686 ~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 765 (956)
||++.....+++|||+|+||+|.++|+.... .++..++.+++.++|+||+|||+++ +|||||.++|+|++.++.+|
T Consensus 227 yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 227 YGVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEE
Confidence 9999999999999999999999999987654 6899999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002178 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 844 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~ 844 (956)
|+|||+++....-. .......-...|+|||.+....|+.++|||||||++||+++ |..||.......-..
T Consensus 303 ISDFGLs~~~~~~~-------~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~-- 373 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYV-------MKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA-- 373 (474)
T ss_pred eCccccccCCccee-------eccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH--
Confidence 99999987543110 00111234578999999999999999999999999999999 888997654432111
Q ss_pred Hhhcccchhh-ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002178 845 AYQSSMMFSV-IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 845 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
.+ ..+.+...|...+..+..++..||..+|++||+|.++.+.++.+.....
T Consensus 374 --------kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 374 --------KIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred --------HHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 12 2334456677888999999999999999999999999999999877544
No 45
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.6e-39 Score=353.83 Aligned_cols=286 Identities=22% Similarity=0.329 Sum_probs=208.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.++|++.+.||+|+||+||+|... +++.||+|++...... ....+.+|+++++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 6899999998754322 23467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++ ++|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 994 7888888654 345788889999999999999999999 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||....+........... .
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~------~---- 221 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLV------L---- 221 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHH------h----
Confidence 11233457899999999875 457889999999999999999999997654433332221110 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC--CCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETD--ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~--~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
+............. -...|+ .+.+...+.+... . ......+.+|+++||+.||++|+|++|+|+||||.
T Consensus 222 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 222 GTPNEDTWPGVHSL----PHFKPERFTLYSPKNLRQAWN----K-LSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred CCCChhhccchhhc----cccccccccccCCccHHHHhh----c-cCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 00000000000000 000000 0001111111111 0 01224456899999999999999999999999997
Q ss_pred cC
Q 002178 938 SD 939 (956)
Q Consensus 938 ~~ 939 (956)
.-
T Consensus 293 ~~ 294 (303)
T cd07869 293 DL 294 (303)
T ss_pred cC
Confidence 64
No 46
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.7e-39 Score=336.65 Aligned_cols=279 Identities=23% Similarity=0.318 Sum_probs=224.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCChhh---HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
+.|+..+.||+|.-|+||++.+++ +..+|+|++.+..... ..+...|-++|+.+.||.++.+|+.|+.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 456667889999999999999764 6899999998765443 346778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|||+||+|..+.+++....+++..++.++..++-||+|||..| ||.|||||+|||+-++|.+.|+||.++.......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999999975442200
Q ss_pred -C-----------------------------C-C------------------ccccceecccccCCCcccccccccCCCC
Q 002178 780 -I-----------------------------E-G------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLT 810 (956)
Q Consensus 780 -~-----------------------------~-~------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 810 (956)
. . . ......+....||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0 0 0001223456799999999999999999
Q ss_pred CcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHH
Q 002178 811 DKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSE 890 (956)
Q Consensus 811 ~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~ 890 (956)
.++|+|+|||++|||+.|..||-...+..... +++...+ .+|.
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~----------NIv~~~l-~Fp~-------------------------- 356 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNNKETLR----------NIVGQPL-KFPE-------------------------- 356 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCchhhHH----------HHhcCCC-cCCC--------------------------
Confidence 99999999999999999999997655432222 2221111 1110
Q ss_pred HHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCC----CccCCCCCccccCCCCCccccccccccCC
Q 002178 891 VMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS----SSSMLKHPYVSSDVSGSNLVSGVIPTITP 955 (956)
Q Consensus 891 v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s----a~e~L~HP~f~~~~~~~~~~~~~~~~~~~ 955 (956)
.++....+.|+|+++|..||.+|+- |+|+-+||||.+-.-. ++...+|+.-|
T Consensus 357 -----------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa--Lir~~~PP~iP 412 (459)
T KOG0610|consen 357 -----------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA--LIRCARPPEIP 412 (459)
T ss_pred -----------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh--heeccCCCcCC
Confidence 0111234568999999999999999 9999999999887774 77777776654
No 47
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=356.61 Aligned_cols=198 Identities=25% Similarity=0.424 Sum_probs=174.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999975 689999999875321 23456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~- 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR- 171 (329)
T ss_pred cCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC-
Confidence 9999999999997643 4788888999999999999999999 999999999999999999999999999865321
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 219 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT 219 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC
Confidence 123468999999999999999999999999999999999999997543
No 48
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=356.70 Aligned_cols=199 Identities=26% Similarity=0.397 Sum_probs=173.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC--CcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||.||+|..++ +..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568889999999999999998543 4689999886432 2234567889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 999999999999997643 4888999999999999999999999 99999999999999999999999999976532
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 184 ~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 232 (340)
T PTZ00426 184 R----------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE 232 (340)
T ss_pred C----------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC
Confidence 1 123468999999999999889999999999999999999999997543
No 49
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=343.08 Aligned_cols=261 Identities=30% Similarity=0.435 Sum_probs=216.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh-HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
......+.++||+|-||.|..+....+..||||+++...... ..+|.+|+++|.+++||||++++|+|..++.+++|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 345566789999999999999999888999999999765544 5899999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
||++|+|.+++.++............|+.||+.||+||.+.. +|||||.++|||+|.++++||+|||+++.+-..++
T Consensus 616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~y 692 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDY 692 (807)
T ss_pred HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCc
Confidence 999999999998875554566677889999999999999998 99999999999999999999999999997655543
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCCCCchhHHHHHHHhhcccchhhcc-C
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISHGKNIVREVNIAYQSSMMFSVID-G 857 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt--g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~ 857 (956)
. +......-..+|||+|.+.-++++.++|||+||+++||+++ ...||....+.. +... ..++++ +
T Consensus 693 y-----~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven-----~~~~~~~~ 760 (807)
T KOG1094|consen 693 Y-----RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVEN-----AGEFFRDQ 760 (807)
T ss_pred e-----eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHh-----hhhhcCCC
Confidence 3 22233345679999999999999999999999999999987 778887543321 1110 001111 1
Q ss_pred C---CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 858 N---MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 858 ~---~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
. ....|.-|+..+++++.+||..+..+||+++++...|++
T Consensus 761 ~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~ 803 (807)
T KOG1094|consen 761 GRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQE 803 (807)
T ss_pred CcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence 1 234578899999999999999999999999999988775
No 50
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.4e-38 Score=356.04 Aligned_cols=296 Identities=22% Similarity=0.369 Sum_probs=222.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
..++|++.++||+|+||.||+|... ++..+|+|.+.... ......+.+|++++++++|+||++++++|.+.++.++||
T Consensus 3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 3578999999999999999999975 68899999887542 233467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. + |+||||||+||++++++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999997643 478888999999999999999974 5 999999999999999999999999998754321
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... ......... ..+.
T Consensus 158 ---------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~--~~~~~~~~~-----~~~~ 221 (333)
T cd06650 158 ---------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAK--ELELMFGCP-----VEGD 221 (333)
T ss_pred ---------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchh--HHHHHhcCc-----ccCC
Confidence 112345889999999999988999999999999999999999999754321 111111000 0000
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC-C-----CCCCCccccccccCCCCCCCCCCccCCC
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP-E-----SDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~-~-----~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
.. ..............|....|..||++.. .+..+.+....+ . .+.+..+|+.+||+.||++|||++|+++
T Consensus 222 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 222 PA--ESETSPRPRPPGRPLSSYGPDSRPPMAI-FELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred cc--ccccCcccCCccchhhhhcccccccccH-HHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 00 0000111112223455567888887642 222222222111 1 1233468999999999999999999999
Q ss_pred CCccccCCC
Q 002178 933 HPYVSSDVS 941 (956)
Q Consensus 933 HP~f~~~~~ 941 (956)
||||+....
T Consensus 299 h~~~~~~~~ 307 (333)
T cd06650 299 HAFIKRSEA 307 (333)
T ss_pred CHHHhcCcc
Confidence 999976643
No 51
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=339.07 Aligned_cols=267 Identities=27% Similarity=0.385 Sum_probs=206.3
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--------------hHHHHHHHHHHHHhcCCCceee
Q 002178 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------------GEKEFLTEIQFLSRLHHRNLVS 684 (956)
Q Consensus 620 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------------~~~~~~~E~~~l~~l~h~nIv~ 684 (956)
...-++|++...||+|.||.|-+|... +++.||||++.+.... ..+...+|+.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 344578999999999999999999954 7999999998753211 1247889999999999999999
Q ss_pred eeccccc--CCcEEEEEecCCCCCHHHHHhhcCCCC-chhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC
Q 002178 685 LVGYCDE--EGEQMLVYEFMSNGTLRDQLSAKSKEP-LGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 685 l~~~~~~--~~~~~LV~e~~~~gsL~~~l~~~~~~~-l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
++.+..+ .+..|||+|||..|.+...= ...+ +++.++++++.++..||+|||.++ ||||||||+|+|++++
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCC
Confidence 9999865 46899999999888774432 2334 899999999999999999999999 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCC----CCCcccchhHHHHHHHHHhCCCCCCCCch
Q 002178 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwS~G~ll~elltg~~pf~~~~~ 837 (956)
|+|||+|||.+.........+ .........||+.|+|||...++. .+.+.||||+||+||.|+.|+.||.....
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~--~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~ 324 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEG--SDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE 324 (576)
T ss_pred CcEEeeccceeeecccCCccc--cHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence 999999999998764432221 112223367999999999998733 34578999999999999999999975432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccc
Q 002178 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 917 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L 917 (956)
..-.. .++. +|-.=|... +..+...|+|.+||
T Consensus 325 ~~l~~----------KIvn------------------------~pL~fP~~p--------------e~~e~~kDli~~lL 356 (576)
T KOG0585|consen 325 LELFD----------KIVN------------------------DPLEFPENP--------------EINEDLKDLIKRLL 356 (576)
T ss_pred HHHHH----------HHhc------------------------CcccCCCcc--------------cccHHHHHHHHHHh
Confidence 21110 1111 122222222 22333447888999
Q ss_pred CCCCCCCCCCccCCCCCccccCCCC
Q 002178 918 TSKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 918 ~~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
..||+.|++..++-.|||...+.++
T Consensus 357 ~KdP~~Ri~l~~ik~Hpwvt~~g~~ 381 (576)
T KOG0585|consen 357 EKDPEQRITLPDIKLHPWVTRDGDS 381 (576)
T ss_pred hcChhheeehhhheecceeccCCCC
Confidence 9999999999999999999877653
No 52
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=354.90 Aligned_cols=242 Identities=24% Similarity=0.391 Sum_probs=193.4
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhc-CCCceeeeecccccCCc
Q 002178 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 620 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 694 (956)
....++|....+||+|+||+|+++..+ +++.+|||++++...- ..+..+.|.+++... +||.++.++..|+..++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 344578889999999999999999976 6889999999876543 235667788888777 59999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.|+||||+.||++..+. ....+++..+.-++..|+.||.|||+++ ||+||||.+|||+|.+|.+||+|||+++.
T Consensus 444 l~fvmey~~Ggdm~~~~---~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHI---HTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEEEecCCCcEEEEE---ecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence 99999999999944433 3356999999999999999999999999 99999999999999999999999999985
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
... ........+||+.|||||++.+..|+.++|.|||||+||||+.|..||..++. .+.. +.
T Consensus 518 ~m~-------~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE-ee~F----------ds 579 (694)
T KOG0694|consen 518 GMG-------QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE-EEVF----------DS 579 (694)
T ss_pred cCC-------CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH-HHHH----------HH
Confidence 432 23456778999999999999999999999999999999999999999975432 2211 11
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCC
Q 002178 855 IDGNMGSYPSECVEKFIKLALKCCQDETDAR 885 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 885 (956)
|-..-..+|..++.+...++.+.+..+|++|
T Consensus 580 I~~d~~~yP~~ls~ea~~il~~ll~k~p~kR 610 (694)
T KOG0694|consen 580 IVNDEVRYPRFLSKEAIAIMRRLLRKNPEKR 610 (694)
T ss_pred HhcCCCCCCCcccHHHHHHHHHHhccCcccc
Confidence 1122234555555555555555555555444
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.4e-38 Score=354.16 Aligned_cols=298 Identities=23% Similarity=0.374 Sum_probs=214.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.++|++.+.||+|+||.||++... ++..||+|.+.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 478999999999999999999975 68899999987543 2334678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ .|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 157 (331)
T cd06649 84 HMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 157 (331)
T ss_pred cCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc--
Confidence 999999999997643 4788899999999999999999853 2999999999999999999999999998755321
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||...... + ......... .+....
T Consensus 158 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-~-~~~~~~~~~----~~~~~~ 224 (331)
T cd06649 158 -------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK-E-LEAIFGRPV----VDGEEG 224 (331)
T ss_pred -------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH-H-HHHHhcccc----cccccC
Confidence 122346899999999999999999999999999999999999999654321 1 111111000 000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC-CC-----CCCCCccccccccCCCCCCCCCCccCCCCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM-PE-----SDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~-~~-----~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
. +.............+.......+|.+. +.+.++.+.... +. ..+...+|+++||.+||++|||++|+++||
T Consensus 225 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 225 E-PHSISPRPRPPGRPVSGHGMDSRPAMA-IFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred C-ccccCcccccccccccccccccccchh-HHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 0 000000000000001111222333332 111222221111 11 123346899999999999999999999999
Q ss_pred ccccCCC
Q 002178 935 YVSSDVS 941 (956)
Q Consensus 935 ~f~~~~~ 941 (956)
||.....
T Consensus 303 ~~~~~~~ 309 (331)
T cd06649 303 FIKRSEV 309 (331)
T ss_pred HHhhccc
Confidence 9976544
No 54
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3e-38 Score=352.07 Aligned_cols=194 Identities=26% Similarity=0.335 Sum_probs=168.7
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
+.||+|+||.||+|... +|+.||+|+++... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999964 68999999987532 222356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccc
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------- 148 (323)
T cd05571 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------- 148 (323)
T ss_pred cHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-------
Confidence 999999754 35889999999999999999999999 999999999999999999999999998753211
Q ss_pred cceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 198 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 198 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCC
Confidence 11123456999999999999999999999999999999999999999654
No 55
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=321.51 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=205.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--------hHHHHHHHHHHHHhc-CCCceeeeecccccC
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 692 (956)
-+.|...+.||+|..++|.++..+ +|..+|+|++...... -.+.-.+|+.+|+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 356777889999999999998865 6889999987642211 123456799999998 699999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
...++|+|.|+.|.|.|++... -.+++...++|++|+..|++|||.+. ||||||||+|||+|++.++||+|||.|
T Consensus 96 sF~FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence 9999999999999999999653 45899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc------CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT------HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 846 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~ 846 (956)
+.+.. .......+||++|+|||.+.. ..|+..+|+||.||++|.++.|..||.+...+.-
T Consensus 171 ~~l~~--------GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM------ 236 (411)
T KOG0599|consen 171 CQLEP--------GEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM------ 236 (411)
T ss_pred eccCC--------chhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH------
Confidence 98753 345567899999999999863 4688899999999999999999999975432110
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCC
Q 002178 847 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 926 (956)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s 926 (956)
+..+..+.. .+.. |. +.+......|++.++|+.||.+|+|
T Consensus 237 ----LR~ImeGky-qF~s---------------------pe--------------Wadis~~~KdLIsrlLqVdp~~Rit 276 (411)
T KOG0599|consen 237 ----LRMIMEGKY-QFRS---------------------PE--------------WADISATVKDLISRLLQVDPTKRIT 276 (411)
T ss_pred ----HHHHHhccc-ccCC---------------------cc--------------hhhccccHHHHHHHHHeeCchhccc
Confidence 001111111 1100 11 1112334568999999999999999
Q ss_pred CccCCCCCccc
Q 002178 927 SSSMLKHPYVS 937 (956)
Q Consensus 927 a~e~L~HP~f~ 937 (956)
++|+|+||||.
T Consensus 277 ake~LaHpff~ 287 (411)
T KOG0599|consen 277 AKEALAHPFFI 287 (411)
T ss_pred HHHHhcChHHH
Confidence 99999999993
No 56
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=337.57 Aligned_cols=261 Identities=20% Similarity=0.334 Sum_probs=209.4
Q ss_pred CcccccHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh---HHHHHHHHHHHHhcCCCceeeee
Q 002178 610 GVRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLV 686 (956)
Q Consensus 610 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~ 686 (956)
+.+.++.+++. ......||+|++|.||+|.+ +|+.||||+++...... .+.+.+|++++++++||||++++
T Consensus 11 ~~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 34455555552 22246799999999999998 68999999987543322 35778999999999999999999
Q ss_pred ccccc----CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCC
Q 002178 687 GYCDE----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 687 ~~~~~----~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~ 761 (956)
|++.+ ....++||||+++|+|.+++... ..+++.....++.|++.||.|||+. + ++||||||+||+++++
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTEN 159 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCC
Confidence 99866 34789999999999999999764 3588899999999999999999985 6 8899999999999999
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCchhH
Q 002178 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 839 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~ 839 (956)
+.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .
T Consensus 160 ~~~kl~dfg~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-~ 228 (283)
T PHA02988 160 YKLKIICHGLEKILSSPP----------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-K 228 (283)
T ss_pred CcEEEcccchHhhhcccc----------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-H
Confidence 999999999998653221 12357889999999976 6899999999999999999999999975432 1
Q ss_pred HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 840 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+....... .+.....|..++..+.+++.+||+.+|++||++.++++.|+.+..
T Consensus 229 ~~~~~i~~--------~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 229 EIYDLIIN--------KNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHHh--------cCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 11111100 111223455678899999999999999999999999999987753
No 57
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.9e-38 Score=356.36 Aligned_cols=285 Identities=24% Similarity=0.372 Sum_probs=215.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCC-----cEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 696 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 696 (956)
+|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788999999999999999964 7899999988643 2234467889999999999999999999997766 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+. ++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999995 6888888543 35889999999999999999999999 9999999999999999999999999998653
Q ss_pred CCCCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
... ........++..|+|||++.+. .++.++||||+||++|||++|+.||...... +......
T Consensus 155 ~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~--------- 218 (372)
T cd07853 155 PDE------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLIT--------- 218 (372)
T ss_pred cCc------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHH---------
Confidence 221 1112334578899999999874 5789999999999999999999999755432 2222111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
...+..+.+.......-....+...+...|....+. ...+..++.+.+|+.+||..||++|+|++|+|+|||
T Consensus 219 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 219 -DLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLY-------TLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred -HHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhc-------ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 111222222222222223333344455555433221 122334556678999999999999999999999999
Q ss_pred cccC
Q 002178 936 VSSD 939 (956)
Q Consensus 936 f~~~ 939 (956)
|...
T Consensus 291 ~~~~ 294 (372)
T cd07853 291 LDEG 294 (372)
T ss_pred hCCC
Confidence 9763
No 58
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.2e-38 Score=350.15 Aligned_cols=192 Identities=29% Similarity=0.405 Sum_probs=167.6
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||+|+||+||+|... +++.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999965 58899999986432 22345678899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------~ 148 (312)
T cd05585 81 FHHLQRE--GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-------D 148 (312)
T ss_pred HHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC-------C
Confidence 9999764 35888999999999999999999999 9999999999999999999999999987542211 1
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~ 196 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDE 196 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCC
Confidence 223456899999999999999999999999999999999999999754
No 59
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.8e-38 Score=369.97 Aligned_cols=294 Identities=22% Similarity=0.306 Sum_probs=207.8
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC------Cceeeeecccc
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH------RNLVSLVGYCD 690 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h------~nIv~l~~~~~ 690 (956)
++...+++|++.++||+|+||+||+|... .++.||||+++... ....++..|+++++.++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 44456789999999999999999999964 58899999986432 223455667777777654 45889999886
Q ss_pred cC-CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCC------
Q 002178 691 EE-GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKF------ 762 (956)
Q Consensus 691 ~~-~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~------ 762 (956)
.+ ++.++|||++ +++|.+++... ..+++..+..|+.||+.||+|||++ + ||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence 54 5789999988 78999988654 3588999999999999999999974 7 99999999999998765
Q ss_pred ----------cEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCC
Q 002178 763 ----------TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPI 832 (956)
Q Consensus 763 ----------~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf 832 (956)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~----------~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDER----------HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred cccccCCCCceEEECCCCccccCc----------cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 49999999876422 1123457899999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHH-----HHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCC
Q 002178 833 SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEK-----FIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDT 907 (956)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~ 907 (956)
........ ... +....+.+|.++... ..++....-...|...|. .+.+............++
T Consensus 346 ~~~~~~~~-~~~----------i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 412 (467)
T PTZ00284 346 DTHDNLEH-LHL----------MEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPK--HLARIARARPVREVIRDD 412 (467)
T ss_pred CCCChHHH-HHH----------HHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHH--HHHhhhcccchhhhhchH
Confidence 76543221 111 111223334333221 111111111111111111 111111000000001234
Q ss_pred CCccccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 908 KTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 908 ~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
.+.|||.+||++||++|+|++|+|+||||...-.
T Consensus 413 ~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 413 LLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP 446 (467)
T ss_pred HHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence 5679999999999999999999999999987433
No 60
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.5e-38 Score=352.11 Aligned_cols=287 Identities=24% Similarity=0.369 Sum_probs=208.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC-----CcEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQM 696 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~ 696 (956)
+|++.+.||+|+||.||+|... +++.||||++... .......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999965 6899999998742 223345788999999999999999999987432 3579
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+ +++|.+++.... .+++..+..++.||++||.|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecC-CCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 999999 579999986543 4889999999999999999999999 9999999999999999999999999997643
Q ss_pred CCCCCCccccceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
..... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ...... ..
T Consensus 155 ~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~-~~~~~~------~~- 222 (338)
T cd07859 155 NDTPT----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV-HQLDLI------TD- 222 (338)
T ss_pred cccCc----cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-HHHHHH------HH-
Confidence 22110 111234568999999999876 67899999999999999999999999654332 111111 01
Q ss_pred ccCCCCCCChHHHHHHHHH-HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCC
Q 002178 855 IDGNMGSYPSECVEKFIKL-ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l-~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
..+..+.+....+... ....+.......|.. ....++..++...+++.+||..||++|||++|+|+|
T Consensus 223 ---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 223 ---LLGTPSPETISRVRNEKARRYLSSMRKKQPVP---------FSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred ---HhCCCCHHHHHHhhhhhHHHHHHhhcccCCCc---------hHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 1122222222222110 000000000111110 011234445556789999999999999999999999
Q ss_pred CccccCCC
Q 002178 934 PYVSSDVS 941 (956)
Q Consensus 934 P~f~~~~~ 941 (956)
|||.+...
T Consensus 291 p~f~~~~~ 298 (338)
T cd07859 291 PYFKGLAK 298 (338)
T ss_pred chhhhcCc
Confidence 99976554
No 61
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=4.4e-38 Score=352.49 Aligned_cols=197 Identities=30% Similarity=0.441 Sum_probs=174.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|... +++.||+|+++... ....+.+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46889999999999999999976 58999999987532 223456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999999654 35788899999999999999999999 99999999999999999999999999976432
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 201 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGS 201 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCC
Confidence 123456899999999999999999999999999999999999999754
No 62
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-37 Score=340.52 Aligned_cols=200 Identities=27% Similarity=0.417 Sum_probs=174.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
+|++.+.||+|+||+||++... +++.||+|.+...... ....+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999964 6899999998753322 23467889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE- 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC-
Confidence 999999999987655556899999999999999999999998 9999999999999999999999999987653211
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......|+..|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~ 204 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQR 204 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCC
Confidence 112345889999999999989999999999999999999999999753
No 63
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-38 Score=330.43 Aligned_cols=200 Identities=29% Similarity=0.465 Sum_probs=180.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhHH---HHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..+|++.+.||+|.||+|-+|.. ..|+.||||.+++.....++ .+.+|+++|+.++||||+.++.+|+..+.+.+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35677888999999999999985 57999999999876665554 467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||..+|.|+||+.+.+ .+++.+.+.+++||..|+.|+|+++ ++|||||.+|||+|.++++||+|||++..+..
T Consensus 132 MEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~- 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD- 205 (668)
T ss_pred EEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc-
Confidence 99999999999998754 4899999999999999999999999 99999999999999999999999999987753
Q ss_pred CCCCccccceecccccCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCCCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
....+..+|++-|.+||++.+.+|. +.+|-||+|++||.++.|..||+..
T Consensus 206 -------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~ 256 (668)
T KOG0611|consen 206 -------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR 256 (668)
T ss_pred -------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc
Confidence 3456778899999999999998885 5799999999999999999999753
No 64
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=7.9e-38 Score=348.09 Aligned_cols=289 Identities=25% Similarity=0.350 Sum_probs=197.1
Q ss_pred CCeeeeeCCeEEEEEEeC---CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc--CCcEEEEEecCC
Q 002178 629 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVYEFMS 703 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~LV~e~~~ 703 (956)
.++||+|+||+||+|... +++.||+|.+..... ...+.+|++++++++||||+++++++.. +...++||||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~- 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA- 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC--cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-
Confidence 468999999999999864 468899999875432 3457789999999999999999998843 45689999999
Q ss_pred CCCHHHHHhhc-------CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE----cCCCcEEEEeeccc
Q 002178 704 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 772 (956)
Q Consensus 704 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~DfGla 772 (956)
+++|.+++... ....+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||++
T Consensus 83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 46898887532 1235888999999999999999999999 9999999999999 46679999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
+....... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........... .+....+
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~-~~~~~~~ 234 (317)
T cd07868 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSN-PYHHDQL 234 (317)
T ss_pred eccCCCCc----cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccc-cccHHHH
Confidence 87543211 1112234568999999999987 4588999999999999999999999964322100000 0000000
Q ss_pred hhhccCCCCCCChHHHHHHHHH------HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCC
Q 002178 852 FSVIDGNMGSYPSECVEKFIKL------ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l------~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ 925 (956)
..++ ...+..+...++.+... +.. +........ .+...++ ......+..+.+++.+||++||++|+
T Consensus 235 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~---~~~~~~~~~~~dli~~mL~~dP~~R~ 306 (317)
T cd07868 235 DRIF-NVMGFPADKDWEDIKKMPEHSTLMKD-FRRNTYTNC---SLIKYME---KHKVKPDSKAFHLLQKLLTMDPIKRI 306 (317)
T ss_pred HHHH-HhcCCCChHHhHHHhhccchhhhhhh-hhccccCcc---cccchHH---hcCCCCChHHHHHHHHHhccCcccCC
Confidence 0000 01111111122211111 000 000000000 1111111 11122344567899999999999999
Q ss_pred CCccCCCCCcc
Q 002178 926 SSSSMLKHPYV 936 (956)
Q Consensus 926 sa~e~L~HP~f 936 (956)
|++|+|+||||
T Consensus 307 t~~e~l~hp~f 317 (317)
T cd07868 307 TSEQAMQDPYF 317 (317)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 65
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.2e-37 Score=340.16 Aligned_cols=194 Identities=25% Similarity=0.404 Sum_probs=167.4
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||+|+||+||++... +++.||+|.+...... ..+.+..|++++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999965 6899999998753322 224677899999999999999999999999999999999999999
Q ss_pred HHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccc
Q 002178 708 RDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 708 ~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
.+++... ....+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~------ 151 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ------ 151 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCC------
Confidence 9887542 3346899999999999999999999998 9999999999999999999999999997654221
Q ss_pred cceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 152 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~ 200 (280)
T cd05608 152 -SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRAR 200 (280)
T ss_pred -ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 1122346899999999999999999999999999999999999999653
No 66
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.1e-38 Score=348.10 Aligned_cols=234 Identities=23% Similarity=0.283 Sum_probs=187.6
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
+.||+|+||.||++... +|+.||+|++.... ......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 36999999999999964 68999999987532 223346778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccc
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
+|.+++.... .+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~------ 149 (323)
T cd05595 81 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG------ 149 (323)
T ss_pred cHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC------
Confidence 9999886543 5889999999999999999999999 9999999999999999999999999987532111
Q ss_pred cceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChH
Q 002178 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 865 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .... . .....+|..
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~~~~---------~-~~~~~~p~~ 217 (323)
T cd05595 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELI---------L-MEEIRFPRT 217 (323)
T ss_pred -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHH-HHHH---------h-cCCCCCCCC
Confidence 112335689999999999999999999999999999999999999975432211 1110 0 011123444
Q ss_pred HHHHHHHHHHHhcccCCCCCC
Q 002178 866 CVEKFIKLALKCCQDETDARP 886 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RP 886 (956)
.+..+.+++.+|++.+|.+|+
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~ 238 (323)
T cd05595 218 LSPEAKSLLAGLLKKDPKQRL 238 (323)
T ss_pred CCHHHHHHHHHHccCCHHHhC
Confidence 556667777777777777776
No 67
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=345.84 Aligned_cols=262 Identities=25% Similarity=0.404 Sum_probs=216.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHHHHhcC-CCceeeeecccccCCcEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~ 696 (956)
....|++.+.||+|.||.||+++.+ +|+.+|+|.+....... ...+.+|+++|+++. ||||+.+++.|++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3467888899999999999999976 49999999998655433 358899999999998 999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC----CcEEEEeeccc
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK----FTAKVADFGLS 772 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~----~~~kl~DfGla 772 (956)
+|||++.||.|.+.+... .+++..+..++.|++.|+.|||+.+ |+||||||+|+|+... +.+|++|||+|
T Consensus 113 lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999776 2899999999999999999999999 9999999999999643 57999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
..... .......+||+.|+|||++....|+..+||||.|+++|.|++|..||..........
T Consensus 187 ~~~~~--------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~---------- 248 (382)
T KOG0032|consen 187 KFIKP--------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL---------- 248 (382)
T ss_pred eEccC--------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH----------
Confidence 87653 234567789999999999999999999999999999999999999997654322211
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
.+..+.+ ...++ .++.....+.+|++.||..||.+|+|++++|+
T Consensus 249 ~i~~~~~----------------------~f~~~--------------~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 249 AILRGDF----------------------DFTSE--------------PWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHcCCC----------------------CCCCC--------------CccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 1111111 00111 12233445568999999999999999999999
Q ss_pred CCccccCCCCC
Q 002178 933 HPYVSSDVSGS 943 (956)
Q Consensus 933 HP~f~~~~~~~ 943 (956)
|||+++....+
T Consensus 293 HpWi~~~~~~~ 303 (382)
T KOG0032|consen 293 HPWIKSIGEAT 303 (382)
T ss_pred CccccCCcccc
Confidence 99998875543
No 68
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-37 Score=347.15 Aligned_cols=240 Identities=24% Similarity=0.302 Sum_probs=191.4
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
+.||+|+||.||++... +++.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999964 68999999987532 223457788999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccc
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------- 148 (328)
T cd05593 81 ELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------- 148 (328)
T ss_pred CHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc-------
Confidence 999988654 35889999999999999999999999 999999999999999999999999998753211
Q ss_pred cceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChH
Q 002178 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 865 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.... +......+|..
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-~~~~~----------~~~~~~~~p~~ 217 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFEL----------ILMEDIKFPRT 217 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-HHHHH----------hccCCccCCCC
Confidence 11123356899999999999999999999999999999999999999754321 11111 11111233445
Q ss_pred HHHHHHHHHHHhcccCCCCCC-----CHHHHH
Q 002178 866 CVEKFIKLALKCCQDETDARP-----SMSEVM 892 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RP-----s~~~v~ 892 (956)
.+..+.+++.+|++.+|.+|+ ++.+++
T Consensus 218 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il 249 (328)
T cd05593 218 LSADAKSLLSGLLIKDPNKRLGGGPDDAKEIM 249 (328)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHh
Confidence 556677777777777777775 555554
No 69
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-37 Score=359.39 Aligned_cols=286 Identities=22% Similarity=0.257 Sum_probs=206.2
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
...+|.+.+.||+|+||.||+|... .++.||||.... ..+.+|++++++++|+||+++++++..++..++|||
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 3567999999999999999999975 588999996432 245689999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
++ .++|.+++.... ..+++..++.|+.|+++||.|||+++ |+||||||+|||++.++.+||+|||+++.......
T Consensus 241 ~~-~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 241 KY-RSDLYTYLGARL-RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred cc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 99 579999886543 36899999999999999999999999 99999999999999999999999999986532211
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCch------hHHHHHHHhhcccchhh
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN------IVREVNIAYQSSMMFSV 854 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~------~~~~~~~~~~~~~~~~~ 854 (956)
........||..|+|||++.+..++.++|||||||++|||++|..|+..... ...+......... .
T Consensus 316 -----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~---~ 387 (461)
T PHA03211 316 -----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQ---V 387 (461)
T ss_pred -----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhc---c
Confidence 1112345699999999999999999999999999999999998877653221 0111111110000 0
Q ss_pred ccCCCCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCC
Q 002178 855 IDGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 855 ~~~~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
........ .......+.... ......+..|+.... +...+....+|+.+||++||++|||++|+|+|
T Consensus 388 ~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 388 HVDEFPQHAGSRLVSQYRHRA-ARNRRPAYTRPAWTR-----------YYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred ccccCCCCcchHHHHHHHhhh-hcccCCccCCcchhh-----------hccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00001111 111111111110 001111111111111 11223456689999999999999999999999
Q ss_pred Ccccc
Q 002178 934 PYVSS 938 (956)
Q Consensus 934 P~f~~ 938 (956)
|||.+
T Consensus 456 p~f~~ 460 (461)
T PHA03211 456 PLFQS 460 (461)
T ss_pred cccCC
Confidence 99975
No 70
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-37 Score=340.14 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=219.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCc-EEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE-QMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~-~~LV~ 699 (956)
++|...+.+|+|+||.++..+.+ +++.+|+|.+..... .......+|+.++++++|||||.+.+.|.+++. .+|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999998865 678999998875433 234577899999999999999999999999988 99999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
+|++||++.+.+.++....+++..+.+++.|++.|+.|||++. |+|||||+.||+++.++.|||+|||+|+.....+
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999999887778999999999999999999999888 9999999999999999999999999999876543
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.....+.||+.|+.||.+.+.+|..|+||||+||++|||++-+++|...+ ....+. ++.....
T Consensus 161 -------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-m~~Li~---------ki~~~~~ 223 (426)
T KOG0589|consen 161 -------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-MSELIL---------KINRGLY 223 (426)
T ss_pred -------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-hHHHHH---------HHhhccC
Confidence 23456789999999999999999999999999999999999999996443 333222 2233334
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.+.|..+..++..++..|++.+|+.||++.+++.+
T Consensus 224 ~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 224 SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 56788999999999999999999999999999976
No 71
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.5e-37 Score=344.59 Aligned_cols=287 Identities=22% Similarity=0.345 Sum_probs=211.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|.+.+.||+|+||+||+|..+ +++.||+|.++.... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57888999999999999999965 688999999875432 2234678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ ++|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 158 (309)
T cd07872 86 LD-KDLKQYMDDCG-NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT-- 158 (309)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc--
Confidence 96 58988886543 34788889999999999999999998 9999999999999999999999999997543221
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... +...... .. .+
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~------~~----~~ 222 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIF------RL----LG 222 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHH------HH----hC
Confidence 11223457889999999865 56889999999999999999999999754332 1111110 00 11
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
..+.+.+..+.......-...|..+|.. .....+..+....+++.+||..||++|+|++|+|+||||+.-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 223 TPTEETWPGISSNDEFKNYNFPKYKPQP---------LINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred CCCHHHHhhhcchhhhhhhhcCccCCCc---------hhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 1112222111111000001112111111 1122233455667899999999999999999999999998755
Q ss_pred CC
Q 002178 941 SG 942 (956)
Q Consensus 941 ~~ 942 (956)
..
T Consensus 294 ~~ 295 (309)
T cd07872 294 TR 295 (309)
T ss_pred cc
Confidence 43
No 72
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.3e-37 Score=350.36 Aligned_cols=290 Identities=22% Similarity=0.313 Sum_probs=212.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCC-----
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 693 (956)
..++|++.+.||+|+||.||+|... +|+.||+|++... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3578999999999999999999964 6899999998643 2233467889999999999999999999885433
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 694 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 694 -~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
..++||||++ ++|.+.++. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMD-ANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCC-cCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCc
Confidence 5799999995 567776643 3778888999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||...+....+... .
T Consensus 171 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~-~------ 235 (359)
T cd07876 171 RTACTN--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV-I------ 235 (359)
T ss_pred cccccC--------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-H------
Confidence 754321 1123346889999999999999999999999999999999999999765433222111 0
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHH--HhHhhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELE--SIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~--~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
...+..+.+....+...........|..+. +..+...... .........+....+|+.+||..||++|+|++|
T Consensus 236 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e 311 (359)
T cd07876 236 ----EQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDE 311 (359)
T ss_pred ----HhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHH
Confidence 112233344444444433333333333221 2222111000 000000112344578999999999999999999
Q ss_pred CCCCCcccc
Q 002178 930 MLKHPYVSS 938 (956)
Q Consensus 930 ~L~HP~f~~ 938 (956)
+|+||||..
T Consensus 312 ~l~hp~~~~ 320 (359)
T cd07876 312 ALRHPYITV 320 (359)
T ss_pred HhcCchhhh
Confidence 999999964
No 73
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.2e-37 Score=339.35 Aligned_cols=261 Identities=27% Similarity=0.426 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC-----------------CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceee
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 684 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 684 (956)
.++|.+.++||+|+||.||+|.+++ +..||+|.+.... .....++.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 4578889999999999999998532 3479999987643 334567999999999999999999
Q ss_pred eecccccCCcEEEEEecCCCCCHHHHHhhcC-----------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEe
Q 002178 685 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS-----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVF 747 (956)
Q Consensus 685 l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~-----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 747 (956)
+++++.+.+..++||||+++|+|.+++.... ...+++..+++++.||+.||.|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 9999999999999999999999999986432 124678889999999999999999999 99
Q ss_pred ccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh
Q 002178 748 HRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 827 (956)
Q Consensus 748 H~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt 827 (956)
||||||+|||++.++.+||+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~ 235 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILM 235 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce-----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHH
Confidence 999999999999999999999999976533221 111223345788999999998899999999999999999997
Q ss_pred --CCCCCCCCchhH--HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 828 --GMQPISHGKNIV--REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 828 --g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+..||....... ......+. ..........+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 236 LCKEQPYGELTDEQVIENAGEFFR-----DQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred ccCCCCCCcCCHHHHHHHHHHHhh-----hccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 556675432211 11111100 00001112234456778999999999999999999999988875
No 74
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=7.2e-38 Score=355.39 Aligned_cols=208 Identities=26% Similarity=0.377 Sum_probs=175.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|... +++.||||++.... ......+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999965 68999999987532 222356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999997643 5899999999999999999999999 9999999999999999999999999987643211
Q ss_pred CCCccc-------------------------------cceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhC
Q 002178 780 IEGIVP-------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG 828 (956)
Q Consensus 780 ~~~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg 828 (956)
...... ........||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 000000 0011124699999999999999999999999999999999999
Q ss_pred CCCCCCCc
Q 002178 829 MQPISHGK 836 (956)
Q Consensus 829 ~~pf~~~~ 836 (956)
+.||....
T Consensus 236 ~~Pf~~~~ 243 (364)
T cd05599 236 YPPFCSDN 243 (364)
T ss_pred CCCCCCCC
Confidence 99997543
No 75
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.9e-37 Score=349.73 Aligned_cols=205 Identities=22% Similarity=0.317 Sum_probs=174.9
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002178 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 620 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
....++|++.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 344678999999999999999999975 58899999986421 22334678899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|...
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~ 192 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM 192 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceec
Confidence 9999999999999999653 3788889999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCC----CCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.... ........||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 193 ~~~~------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~ 251 (370)
T cd05621 193 DETG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS 251 (370)
T ss_pred ccCC------ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC
Confidence 3221 11123456999999999997643 7889999999999999999999997543
No 76
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-38 Score=309.30 Aligned_cols=269 Identities=25% Similarity=0.369 Sum_probs=213.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccC-----Cc
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 694 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 694 (956)
+..++|.+.+.+|+|||+-||.++ ..+++.+|+|++.....+..+..++|++..++++||||++++++...+ .+
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 346789999999999999999999 568899999999887878888999999999999999999999997433 35
Q ss_pred EEEEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
.||+++|+..|||.+.+... .+..+++.++++|+.+|++||++||+.. ++++||||||.|||+.+++.+++.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCc
Confidence 89999999999999999763 3446999999999999999999999986 68999999999999999999999999999
Q ss_pred cccCCCCCCCc--cccceecccccCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002178 773 RLAPVPDIEGI--VPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 773 ~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
+...-.-.... ..-+.-.....|..|+|||.+.- ...++++|||||||++|+|+.|..||+.... ..
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~--------~G 248 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ--------QG 248 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh--------cC
Confidence 76542211100 00011134468899999999964 5678899999999999999999999963211 00
Q ss_pred cccchhhccCCCC-CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 848 SSMMFSVIDGNMG-SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 848 ~~~~~~~~~~~~~-~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
......+..+... +-...+++.+.++++.|++.||.+||+..+++..+++.
T Consensus 249 gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 249 GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111122222211 11122789999999999999999999999999887653
No 77
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.2e-37 Score=349.52 Aligned_cols=260 Identities=25% Similarity=0.409 Sum_probs=206.4
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEe------CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccccC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 692 (956)
...++|++.+.||+|+||+||+|.+ .++..||||+++... ....+.+.+|+++++.+ +||||++++++|.+.
T Consensus 32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 3456788899999999999999973 236689999987533 33346788999999999 899999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 715 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~--------------------------------------------------------- 715 (956)
+..++||||+++|+|.++++...
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999999999986532
Q ss_pred ----------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 716 ----------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 716 ----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
...+++..+..++.||++||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 124778889999999999999999998 9999999999999999999999999998654221
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
. ........++..|+|||++.+..++.++|||||||++|||++ |..||............ . ..+.
T Consensus 269 ~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~-~--------~~~~ 334 (375)
T cd05104 269 N-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM-I--------KEGY 334 (375)
T ss_pred c-----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH-H--------HhCc
Confidence 1 011122335678999999999999999999999999999998 88888653322111111 1 1111
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
....+...+.++.+++.+||+.+|++||++.++++.|++
T Consensus 335 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 335 RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 112233445789999999999999999999999999885
No 78
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.5e-37 Score=346.46 Aligned_cols=195 Identities=27% Similarity=0.414 Sum_probs=167.5
Q ss_pred CeeeeeCCeEEEEEEe----CCCcEEEEEEecCCCh----hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 630 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+.||+|+||.||++.. .+++.||+|+++.... .....+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 3578999999875321 2234677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.+++.... .+.+..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 154 (323)
T cd05584 82 LSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-- 154 (323)
T ss_pred CCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC--
Confidence 99999999997643 4778888899999999999999999 9999999999999999999999999987532211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~ 204 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN 204 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC
Confidence 11233568999999999999889999999999999999999999997543
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.6e-37 Score=347.94 Aligned_cols=199 Identities=27% Similarity=0.346 Sum_probs=169.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEe----CCCcEEEEEEecCCC----hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcE
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGS----LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 695 (956)
+|++.+.||+|+||+||++.. .+++.||+|++.... ....+.+.+|+++++++ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999875 258899999986422 12234678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.+++..+ ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 9999999999999999654 34888999999999999999999999 999999999999999999999999999764
Q ss_pred CCCCCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
.... ........||..|+|||++.+. .++.++|||||||++|||++|+.||..
T Consensus 156 ~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 156 LSEE------KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred cccC------CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 3221 1112345689999999999875 478899999999999999999999963
No 80
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.4e-37 Score=335.55 Aligned_cols=250 Identities=37% Similarity=0.594 Sum_probs=200.6
Q ss_pred CCCeeeeeCCeEEEEEEeC-----CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 628 SSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+.+.||.|.||.||+|.+. .+..|+||.++... ....+.+.+|++.+++++||||++++|++...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3568999999999999976 25789999997643 33467899999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.++++......+++..+..|+.||++||+|||+++ ++|+||+++||++++++.+||+|||++.......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~-- 157 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS-- 157 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSS--
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc--
Confidence 99999999998876677999999999999999999999998 9999999999999999999999999998763221
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.........+...|+|||.+....++.++||||||+++|||++ |+.||..... .+.... +.++...
T Consensus 158 ---~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-~~~~~~---------~~~~~~~ 224 (259)
T PF07714_consen 158 ---KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-EEIIEK---------LKQGQRL 224 (259)
T ss_dssp ---SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-HHHHHH---------HHTTEET
T ss_pred ---cccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccc---------ccccccc
Confidence 1122233456778999999999999999999999999999999 6788865432 221111 1222233
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
..+..++..+.+++..||+.+|++||++.++++.|
T Consensus 225 ~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 225 PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 45666788899999999999999999999999875
No 81
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-37 Score=345.57 Aligned_cols=194 Identities=27% Similarity=0.420 Sum_probs=166.5
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|..+ +++.||+|++.... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999965 68999999987532 12234667788888876 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++.... .+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~----- 150 (320)
T cd05590 81 GDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG----- 150 (320)
T ss_pred chHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-----
Confidence 99999987643 4888999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~ 199 (320)
T cd05590 151 --KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAE 199 (320)
T ss_pred --CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 1123456899999999999999999999999999999999999999754
No 82
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.2e-37 Score=353.44 Aligned_cols=204 Identities=23% Similarity=0.318 Sum_probs=173.2
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
...++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++.++...+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568999999999999999999965 68999999986422 222345778999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++....
T Consensus 120 lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999998653 3677888889999999999999999 9999999999999999999999999997653
Q ss_pred CCCCCCccccceecccccCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 194 ~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~ 251 (370)
T cd05596 194 ANG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (370)
T ss_pred CCC------cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCC
Confidence 221 1112345699999999998753 47889999999999999999999997543
No 83
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-38 Score=339.33 Aligned_cols=264 Identities=30% Similarity=0.505 Sum_probs=225.1
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002178 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 616 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
+++++....+....++||.|.||.||.|.|+. .-.||||.++.+.+. ..+|+.|+.+|+.++|||+|+++|+|..+..
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMe-veEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchh-HHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 35666666777788999999999999999874 678999999986655 4589999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
+|||+|||..|+|.+||++..+..++....+.+|.||+.|++||..++ +|||||.++|+|+.++..|||+|||++++
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence 999999999999999999988888888889999999999999999998 99999999999999999999999999998
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchh
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
+..+.+.. + ....-.+-|.|||-+....++.|+|||+|||+|||+.| |..||...+ ..+ .+.
T Consensus 415 MtgDTYTA----H--AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-lSq----------VY~ 477 (1157)
T KOG4278|consen 415 MTGDTYTA----H--AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQ----------VYG 477 (1157)
T ss_pred hcCCceec----c--cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-HHH----------HHH
Confidence 86443221 1 11223467999999999999999999999999999999 778886432 211 122
Q ss_pred hcc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 854 VID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 854 ~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+++ +.+..-|+.|++.++++|..||++.|.+||+++++-+.+|.++.
T Consensus 478 LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 478 LLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred HHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 222 33456689999999999999999999999999999999987654
No 84
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.3e-37 Score=351.48 Aligned_cols=208 Identities=25% Similarity=0.338 Sum_probs=173.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999864 68999999886432 222356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 999999999999654 35788889999999999999999999 9999999999999999999999999996432110
Q ss_pred CC----------Cccc------------------------------cceecccccCCCcccccccccCCCCCcccchhHH
Q 002178 780 IE----------GIVP------------------------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLG 819 (956)
Q Consensus 780 ~~----------~~~~------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G 819 (956)
.. .... ........||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 0000 0000124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCc
Q 002178 820 VVFLELLTGMQPISHGK 836 (956)
Q Consensus 820 ~ll~elltg~~pf~~~~ 836 (956)
|++|||++|+.||....
T Consensus 236 vil~elltG~~Pf~~~~ 252 (377)
T cd05629 236 AIMFECLIGWPPFCSEN 252 (377)
T ss_pred hhhhhhhcCCCCCCCCC
Confidence 99999999999996543
No 85
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-37 Score=350.99 Aligned_cols=208 Identities=26% Similarity=0.369 Sum_probs=175.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|... +++.||+|++..... .....+.+|+.++.+++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 689999999875322 22356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 999999999999764 35889999999999999999999999 9999999999999999999999999997643211
Q ss_pred CCCc----------------------------cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC
Q 002178 780 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 831 (956)
Q Consensus 780 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~p 831 (956)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 0000 000011235799999999999999999999999999999999999999
Q ss_pred CCCCc
Q 002178 832 ISHGK 836 (956)
Q Consensus 832 f~~~~ 836 (956)
|....
T Consensus 236 f~~~~ 240 (363)
T cd05628 236 FCSET 240 (363)
T ss_pred CCCCC
Confidence 97543
No 86
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.9e-37 Score=332.70 Aligned_cols=256 Identities=25% Similarity=0.407 Sum_probs=208.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC----CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||.||+|.+. .+..||+|.++.... .....+.+|+.++++++||||+++++++...+..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 457888999999999999999853 367899999886433 334578999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+|++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE-GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 999999999999997643 46889999999999999999999998 99999999999999999999999998765321
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. ........++..|+|||++.+..++.++|||||||++||+++ |+.||....... ... .+.+
T Consensus 160 ~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~-~~~---------~~~~ 223 (266)
T cd05064 160 EA------IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD-VIK---------AVED 223 (266)
T ss_pred cc------hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHH---------HHHC
Confidence 11 011112335678999999999999999999999999999775 999997543221 111 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+...+.+..++..+.+++.+||+.+|.+||++.++.+.|+++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 224 GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 222344666788899999999999999999999999988754
No 87
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.9e-37 Score=348.68 Aligned_cols=264 Identities=25% Similarity=0.391 Sum_probs=208.6
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccc
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 690 (956)
+....++|++.+.||+|+||.||+|.+. ++..||+|+++... ......+.+|+++++.+ +|+||++++++|.
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~ 112 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT 112 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec
Confidence 3445568999999999999999998842 24579999997543 33345788999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC-------------------------------------------------------
Q 002178 691 EEGEQMLVYEFMSNGTLRDQLSAKS------------------------------------------------------- 715 (956)
Q Consensus 691 ~~~~~~LV~e~~~~gsL~~~l~~~~------------------------------------------------------- 715 (956)
..+..++||||+++|+|.++++...
T Consensus 113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (374)
T cd05106 113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS 192 (374)
T ss_pred CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence 9999999999999999999986421
Q ss_pred -------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 716 -------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 716 -------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
..++++..+++++.||+.||+|||+++ |+||||||+||++++++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-- 267 (374)
T cd05106 193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN-- 267 (374)
T ss_pred ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--
Confidence 124778889999999999999999998 99999999999999999999999999976532210
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
........++..|+|||++.+..++.++|||||||++|||++ |+.||............. ..+....
T Consensus 268 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~---------~~~~~~~ 335 (374)
T cd05106 268 ---YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV---------KRGYQMS 335 (374)
T ss_pred ---eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH---------HcccCcc
Confidence 111122335678999999999999999999999999999997 999996533211111110 0111112
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.+...+..+.+++.+||+.+|.+||++.++++.|+++.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 23344678999999999999999999999999998753
No 88
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.2e-37 Score=351.62 Aligned_cols=208 Identities=26% Similarity=0.342 Sum_probs=177.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|... +++.||+|+++.... .....+.+|+++++.++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47889999999999999999975 689999999875321 23457888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999765 45889999999999999999999998 9999999999999999999999999997654322
Q ss_pred CC----------------------CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IE----------------------GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.. ............||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 00 0000112234568999999999999999999999999999999999999997654
No 89
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.1e-37 Score=351.95 Aligned_cols=207 Identities=22% Similarity=0.317 Sum_probs=173.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.|+..+.||+|+||+||+|... +++.||+|++..... ...+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788999999999999999864 689999999875322 234568899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++|+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 999999999997643 4788889999999999999999999 99999999999999999999999999864321100
Q ss_pred CCc----------------------------------------cccceecccccCCCcccccccccCCCCCcccchhHHH
Q 002178 781 EGI----------------------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 820 (956)
Q Consensus 781 ~~~----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ 820 (956)
... ..........||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 000 0000112346999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc
Q 002178 821 VFLELLTGMQPISHGK 836 (956)
Q Consensus 821 ll~elltg~~pf~~~~ 836 (956)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (381)
T cd05626 237 ILFEMLVGQPPFLAPT 252 (381)
T ss_pred HHHHHHhCCCCCcCCC
Confidence 9999999999997544
No 90
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.7e-37 Score=346.40 Aligned_cols=234 Identities=24% Similarity=0.286 Sum_probs=183.4
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
+.||+|+||.||++... +|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999964 68999999987532 223356778999999999999999999999999999999999999
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 150 (325)
T cd05594 81 ELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG----- 150 (325)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-----
Confidence 999988654 358899999999999999999997 67 9999999999999999999999999987532111
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +......+|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-~~~~~----------i~~~~~~~p~ 217 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-KLFEL----------ILMEEIRFPR 217 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-HHHHH----------HhcCCCCCCC
Confidence 1123346899999999999999999999999999999999999999754321 11111 1111112333
Q ss_pred HHHHHHHHHHHHhcccCCCCCC
Q 002178 865 ECVEKFIKLALKCCQDETDARP 886 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RP 886 (956)
..+..+.+++.+|++.+|++|+
T Consensus 218 ~~~~~~~~li~~~L~~dP~~R~ 239 (325)
T cd05594 218 TLSPEAKSLLSGLLKKDPKQRL 239 (325)
T ss_pred CCCHHHHHHHHHHhhcCHHHhC
Confidence 3444555566666666666664
No 91
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.3e-37 Score=348.84 Aligned_cols=290 Identities=20% Similarity=0.293 Sum_probs=212.9
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccC------
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 692 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 692 (956)
..++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999965 68899999987532 23346788999999999999999999987543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
...++||||++ ++|.+++.. .+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 35799999995 578887743 3778889999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
+..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+...
T Consensus 174 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~-------- 237 (364)
T cd07875 174 RTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV-------- 237 (364)
T ss_pred cccCCC--------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHH--------
Confidence 765321 1123346899999999999999999999999999999999999999765443222111
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHH-HHhH-hhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVMREL-ESIW-NMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L-~~~~-~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
+. ..+....+....+...+.......|... ..+.++.... .... .........+.+||.+||+.||++|+|++|
T Consensus 238 --~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e 314 (364)
T cd07875 238 --IE-QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDE 314 (364)
T ss_pred --HH-hcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHH
Confidence 11 1222233444444444333333322221 1222111110 0000 000112334578999999999999999999
Q ss_pred CCCCCcccc
Q 002178 930 MLKHPYVSS 938 (956)
Q Consensus 930 ~L~HP~f~~ 938 (956)
+|+||||..
T Consensus 315 ~L~hp~~~~ 323 (364)
T cd07875 315 ALQHPYINV 323 (364)
T ss_pred HhcCccccc
Confidence 999999964
No 92
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-38 Score=333.70 Aligned_cols=250 Identities=26% Similarity=0.385 Sum_probs=213.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
...|...++||+|.||.||+|.+. .++.||+|++.-.... ...++.+|+.++...+++||.++||.+..+..++++||
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMe 91 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIME 91 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHH
Confidence 456777899999999999999964 6899999999865433 34688899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
||.||++.+.++.. ..+.+..+..|.+++..||.|||.++ .+|||||+.|||+..+|.+|++|||.+.......
T Consensus 92 y~~gGsv~~lL~~~--~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~- 165 (467)
T KOG0201|consen 92 YCGGGSVLDLLKSG--NILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV- 165 (467)
T ss_pred HhcCcchhhhhccC--CCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh-
Confidence 99999999999653 33577888889999999999999999 9999999999999999999999999997765332
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......||+.|||||++.+..|+.|+||||||++.+||.+|.+|+..... ...++.+.....+
T Consensus 166 ------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP----------mrvlflIpk~~PP 229 (467)
T KOG0201|consen 166 ------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP----------MRVLFLIPKSAPP 229 (467)
T ss_pred ------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc----------ceEEEeccCCCCC
Confidence 223567899999999999999999999999999999999999999975443 2233333344445
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.....++..+.+++..|++++|+.||++.++++.
T Consensus 230 ~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 230 RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 5556788899999999999999999999998853
No 93
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=6.5e-37 Score=330.66 Aligned_cols=256 Identities=25% Similarity=0.442 Sum_probs=210.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch-hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 3467889999999999999999988888999998875433 356889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.++++......+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 83 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 83 MAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 99999999998765567889999999999999999999998 99999999999999999999999999986542211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||++.+..++.++|||||||++|||++ |+.||........ ... .. .....
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-~~~-~~--------~~~~~ 223 (261)
T cd05072 159 -----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDV-MSA-LQ--------RGYRM 223 (261)
T ss_pred -----eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHH-HHH-HH--------cCCCC
Confidence 11122345678999999998889999999999999999998 9999865432211 111 11 11111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
+.+..++..+.+++.+|+..+|++||+++++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 2233456788999999999999999999999998875
No 94
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.6e-37 Score=344.11 Aligned_cols=192 Identities=26% Similarity=0.389 Sum_probs=166.1
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|... +++.||+|+++... ....+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 68899999987532 22335677888888776 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~----- 150 (329)
T cd05618 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG----- 150 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-----
Confidence 9999988654 35889999999999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~ 833 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~ 197 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCc
Confidence 11234568999999999999999999999999999999999999995
No 95
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.6e-37 Score=344.24 Aligned_cols=192 Identities=26% Similarity=0.394 Sum_probs=166.8
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|..+++++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999965 689999999875322 2234678899999988 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~------ 149 (329)
T cd05588 81 GDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP------ 149 (329)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC------
Confidence 9999988654 35899999999999999999999999 999999999999999999999999998742211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~ 833 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~ 197 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 197 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcc
Confidence 112234568999999999999999999999999999999999999995
No 96
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.8e-37 Score=352.65 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=173.3
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
+|+..++||+|+||+||+|+.. +++.||+|++.... ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999964 68999999987532 2234578889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++|+|.+++.+. ..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 99999999999764 34788888999999999999999999 99999999999999999999999999854321100
Q ss_pred CC----------------------------------------ccccceecccccCCCcccccccccCCCCCcccchhHHH
Q 002178 781 EG----------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGV 820 (956)
Q Consensus 781 ~~----------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ 820 (956)
.. ...........||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00 00000112346999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCc
Q 002178 821 VFLELLTGMQPISHGK 836 (956)
Q Consensus 821 ll~elltg~~pf~~~~ 836 (956)
++|||++|+.||....
T Consensus 237 il~elltG~~Pf~~~~ 252 (382)
T cd05625 237 ILYEMLVGQPPFLAQT 252 (382)
T ss_pred HHHHHHhCCCCCCCCC
Confidence 9999999999997543
No 97
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=291.78 Aligned_cols=284 Identities=25% Similarity=0.404 Sum_probs=219.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|...++||+|.||+||||+. .+++.||+|++.... ........+|+-+++.++|.|||++++....+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678999999999999994 568999999887433 22346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
| ..+|..+...-+ ..++.+.++.++.|+++||.|+|+++ +.|||+||.|.|++.+|+.|++|||+|+-+..+
T Consensus 83 c-dqdlkkyfdsln-g~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgip--- 154 (292)
T KOG0662|consen 83 C-DQDLKKYFDSLN-GDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIP--- 154 (292)
T ss_pred h-hHHHHHHHHhcC-CcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCc---
Confidence 9 579998886543 35888899999999999999999999 999999999999999999999999999976532
Q ss_pred CccccceecccccCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.........|..|++|.++.+.+ |+.+.|+||-||++.|+.....|.+.+.+..++....+.. ++
T Consensus 155 ----vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~----------lg 220 (292)
T KOG0662|consen 155 ----VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL----------LG 220 (292)
T ss_pred ----eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHH----------hC
Confidence 34455667889999999998854 8899999999999999999777777777777776655432 11
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
...++.++.+.++ +|..--|.+... ..+.+..|.......|+++++|.-+|..|++|+++|+||||+...
T Consensus 221 ~p~ed~wps~t~l------pdyk~yp~ypat----tswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~s 290 (292)
T KOG0662|consen 221 TPTEDQWPSMTKL------PDYKPYPIYPAT----TSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDFS 290 (292)
T ss_pred CCccccCCccccC------CCCcccCCcccc----chHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccccC
Confidence 1222222222221 111111211111 112223344445566899999999999999999999999997643
No 98
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.5e-37 Score=342.21 Aligned_cols=200 Identities=23% Similarity=0.366 Sum_probs=170.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCC-CceeeeecccccCCcEEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~LV~ 699 (956)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.+.| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999965 57899999987532 2234567889999999976 56888999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 9999999999996543 4788899999999999999999998 9999999999999999999999999987432111
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~ 205 (324)
T cd05587 156 -------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED 205 (324)
T ss_pred -------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 12234568999999999999999999999999999999999999997543
No 99
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-37 Score=349.45 Aligned_cols=289 Identities=20% Similarity=0.291 Sum_probs=202.8
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
....+|++.+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++......++||
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 136 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVL 136 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEE
Confidence 34567999999999999999999975 5789999975432 2346899999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+ .++|.+++... ...+++..++.|+.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 137 e~~-~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 210 (357)
T PHA03209 137 PHY-SSDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA- 210 (357)
T ss_pred Ecc-CCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC-
Confidence 999 57999988654 346899999999999999999999999 999999999999999999999999999753211
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhH-HHHHHHhhcccchhhcc--
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVNIAYQSSMMFSVID-- 856 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~-- 856 (956)
.......||..|+|||++.+..++.++|||||||++|||+++..++....... ...... ....+..++.
T Consensus 211 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~-~~~~l~~~~~~~ 282 (357)
T PHA03209 211 -------PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS-CHSHLLKIISTL 282 (357)
T ss_pred -------cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHH-HHHHHHHHHHHh
Confidence 11233568999999999999999999999999999999999766654322111 000000 0000011110
Q ss_pred -CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 857 -GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 857 -~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.....++.+.... +....+......|..... ...++. ........++|.+||+.||++||||+|+|+|||
T Consensus 283 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~ 353 (357)
T PHA03209 283 KVHPEEFPRDPGSR---LVRGFIEYASLERQPYTR-YPCFQR-----VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPM 353 (357)
T ss_pred ccChhhcCCCCccH---HHHHHHhhcccCCCcccc-cHHHhc-----cCCCchHHHHHHHHHcCCcccCcCHHHHhcCch
Confidence 0000111000000 011111111111111100 000110 122334457999999999999999999999999
Q ss_pred ccc
Q 002178 936 VSS 938 (956)
Q Consensus 936 f~~ 938 (956)
|+.
T Consensus 354 f~~ 356 (357)
T PHA03209 354 FAQ 356 (357)
T ss_pred hcc
Confidence 975
No 100
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-37 Score=354.83 Aligned_cols=265 Identities=23% Similarity=0.352 Sum_probs=217.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCC-cEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecc-cc----c--C
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDG-TVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGY-CD----E--E 692 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~-~~----~--~ 692 (956)
...++++.+.|.+|||+.||.|.+..+ ..||+|++...+....+.+.+|+++|+.|+ |+|||.+++. .. . .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 345667788999999999999997765 999999988777777889999999999997 9999999993 21 1 2
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
-+.+|.||||+||.|-|++..+-...|++.++++|+.|+++|+++||.. ++||||||||-+|||++.++..||||||.|
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 3789999999999999999876555699999999999999999999987 588999999999999999999999999998
Q ss_pred cccCCCCC--CCccccceecccccCCCccccccc---ccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002178 773 RLAPVPDI--EGIVPAHVSTVVKGTPGYLDPEYF---LTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 773 ~~~~~~~~--~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
.-...... .+..--...-...-|+.|+|||.+ .+...++|+||||+||+||-|+....||+....
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~---------- 263 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK---------- 263 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc----------
Confidence 64322110 000000111233578999999987 467899999999999999999999999986532
Q ss_pred cccchhhccCCCCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 848 SSMMFSVIDGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
..++.+..... .+.++..+..+|..|++.+|.+||++-+|+..+.++.+.
T Consensus 264 ----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 264 ----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 24555554433 368999999999999999999999999999999887664
No 101
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.2e-36 Score=332.76 Aligned_cols=256 Identities=30% Similarity=0.531 Sum_probs=209.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCC------CcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
++|++.+.||+|+||.||+|.... ...||+|.+..... .....+.+|++++++++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 468889999999999999998642 25799999875432 33467899999999999999999999999889999
Q ss_pred EEEecCCCCCHHHHHhhcCC--------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC
Q 002178 697 LVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 762 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~ 762 (956)
++|||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999975421 45788899999999999999999999 99999999999999999
Q ss_pred cEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHH
Q 002178 763 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 841 (956)
Q Consensus 763 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~ 841 (956)
.+||+|||+++.....+. ........+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+.
T Consensus 162 ~~~L~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05048 162 TVKISDFGLSRDIYSADY-----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEECCCcceeecccccc-----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999976532221 111223346788999999998899999999999999999998 9999875432 111
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 842 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
.. .+..+.....+..++.++.+++.+||+.+|.+||++.++.+.|+.
T Consensus 236 ~~---------~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 236 IE---------MIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH---------HHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 112223334567788999999999999999999999999999875
No 102
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.1e-37 Score=346.61 Aligned_cols=203 Identities=26% Similarity=0.349 Sum_probs=174.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999965 689999999875322 23456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999764 235889999999999999999999999 9999999999999999999999999998654321
Q ss_pred CCCccccceecccccCCCcccccccc------cCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFL------THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~ 213 (330)
T cd05601 157 ------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT 213 (330)
T ss_pred ------ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCC
Confidence 11223346899999999987 4567889999999999999999999997543
No 103
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.4e-37 Score=347.18 Aligned_cols=256 Identities=28% Similarity=0.417 Sum_probs=195.0
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
+|+..++||+|+||+||+|+.. +++.||||++..... ...+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 4556788999999999999965 689999999865432 33467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++|+|.+.. ...+..+..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 155 ~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 222 (353)
T PLN00034 155 DGGSLEGTH------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--- 222 (353)
T ss_pred CCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc---
Confidence 999986532 2456778889999999999999999 9999999999999999999999999998653221
Q ss_pred ccccceecccccCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..... .++.
T Consensus 223 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-~~~~--------------- 282 (353)
T PLN00034 223 ----DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-GDWA--------------- 282 (353)
T ss_pred ----ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-ccHH---------------
Confidence 11233468999999998743 2345689999999999999999999963211 0000
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
..... .+....+. .| ........+|+.+||..||++|++++|+++||||.
T Consensus 283 ----------~~~~~---~~~~~~~~-~~----------------~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~ 332 (353)
T PLN00034 283 ----------SLMCA---ICMSQPPE-AP----------------ATASREFRHFISCCLQREPAKRWSAMQLLQHPFIL 332 (353)
T ss_pred ----------HHHHH---HhccCCCC-CC----------------CccCHHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence 00000 00011111 00 01122234678888999999999999999999998
Q ss_pred cCCCC
Q 002178 938 SDVSG 942 (956)
Q Consensus 938 ~~~~~ 942 (956)
.....
T Consensus 333 ~~~~~ 337 (353)
T PLN00034 333 RAQPG 337 (353)
T ss_pred cCCcc
Confidence 87654
No 104
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.2e-36 Score=327.50 Aligned_cols=251 Identities=29% Similarity=0.486 Sum_probs=205.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
++|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM-SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc-cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 46788899999999999999988888999998875432 34578899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05114 83 NGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--- 155 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce---
Confidence 999999997543 35889999999999999999999999 99999999999999999999999999876532211
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||...... +.... +..+.....
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~-~~~~~---------i~~~~~~~~ 222 (256)
T cd05114 156 ---TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY-EVVEM---------ISRGFRLYR 222 (256)
T ss_pred ---eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH---------HHCCCCCCC
Confidence 11122235568999999998889999999999999999999 88898654432 11111 111112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 444567889999999999999999999998875
No 105
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.8e-37 Score=343.46 Aligned_cols=239 Identities=24% Similarity=0.384 Sum_probs=188.5
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHH---HhcCCCceeeeecccccCCcEEEE
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFL---SRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l---~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 667889999999999999965 68999999987532 12234566666554 567899999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++|+|..+++. ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 999999999988854 35899999999999999999999999 999999999999999999999999998753211
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
........|++.|+|||.+.+..++.++|||||||++|||++|+.||...... +.... +.. .
T Consensus 155 -------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~---------i~~-~ 216 (324)
T cd05589 155 -------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDS---------IVN-D 216 (324)
T ss_pred -------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHH---------HHh-C
Confidence 11223456899999999999999999999999999999999999999754321 11111 111 1
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSM 888 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 888 (956)
...+|...+..+.+++.+|++.+|.+||++
T Consensus 217 ~~~~p~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 217 EVRYPRFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred CCCCCCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 122344455667777777777777777743
No 106
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.7e-37 Score=336.89 Aligned_cols=277 Identities=25% Similarity=0.380 Sum_probs=201.2
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhc---CCCceeeeeccccc-----CC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDE-----EG 693 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~-----~~ 693 (956)
+|++.+.||+|+||+||+|... +++.||+|.++..... ....+.+|+++++++ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5888999999999999999965 6899999988753221 223556677776665 69999999998754 34
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||++ ++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccc
Confidence 5799999996 59999997765556899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
...... ......|+..|+|||++.+..++.++||||+||++|||++|+.||........ ......
T Consensus 157 ~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~-~~~~~~------ 221 (288)
T cd07863 157 IYSCQM--------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ-LGKIFD------ 221 (288)
T ss_pred cccCcc--------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHH-HHHHHH------
Confidence 654221 12234578899999999998999999999999999999999999865433221 111110
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCC
Q 002178 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
.... ......+.. ........ .+..... +....++.+....+++.+||..||++|+|++|++.|
T Consensus 222 ~~~~---~~~~~~~~~-~~~~~~~~--~~~~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 222 LIGL---PPEDDWPRD-VTLPRGAF--SPRGPRP----------VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HhCC---CChhhCccc-cccccccc--CCCCCCc----------hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000000000 00000000 0100001 112223344455689999999999999999999999
Q ss_pred Ccc
Q 002178 934 PYV 936 (956)
Q Consensus 934 P~f 936 (956)
|||
T Consensus 286 p~f 288 (288)
T cd07863 286 PFF 288 (288)
T ss_pred CCC
Confidence 998
No 107
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=5e-37 Score=355.32 Aligned_cols=279 Identities=22% Similarity=0.337 Sum_probs=200.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccC--------C
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------G 693 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------~ 693 (956)
.++|++.+.||+|+||+||+|... +++.||||++.... ....+|+.+++.++|+||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999964 68999999886432 2345799999999999999998876321 2
Q ss_pred cEEEEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeec
Q 002178 694 EQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFG 770 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfG 770 (956)
..++||||++ ++|.+++.. .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 4679999996 588887753 23456889999999999999999999999 99999999999999665 79999999
Q ss_pred cccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
+|+...... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.............
T Consensus 217 la~~~~~~~--------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~---- 284 (440)
T PTZ00036 217 SAKNLLAGQ--------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRII---- 284 (440)
T ss_pred cchhccCCC--------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH----
Confidence 998654221 1223468999999999876 468999999999999999999999997554322211110
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCccccccccCCCCCCCCCCc
Q 002178 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
.. .+..+.+....+..-.. -. .-|...+ . .+...+|. ....+.+|+.+||++||++|+|+.
T Consensus 285 ---~~----~~~p~~~~~~~~~~~~~-~~-~~~~~~~--~-------~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~ 346 (440)
T PTZ00036 285 ---QV----LGTPTEDQLKEMNPNYA-DI-KFPDVKP--K-------DLKKVFPKGTPDDAINFISQFLKYEPLKRLNPI 346 (440)
T ss_pred ---HH----hCCCCHHHHHHhchhhh-cc-cCCccCc--h-------hHHHHhccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 00 11111111111000000 00 0011010 0 11112232 344567999999999999999999
Q ss_pred cCCCCCccccC
Q 002178 929 SMLKHPYVSSD 939 (956)
Q Consensus 929 e~L~HP~f~~~ 939 (956)
|+|+||||..-
T Consensus 347 e~l~hp~f~~~ 357 (440)
T PTZ00036 347 EALADPFFDDL 357 (440)
T ss_pred HHhCChhHHhh
Confidence 99999999654
No 108
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=6.6e-37 Score=330.51 Aligned_cols=256 Identities=29% Similarity=0.496 Sum_probs=215.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
...+|++.+.||.|+||.||+|...+++.+|+|.+..........+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45678889999999999999999888999999999876665567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||++++++.+||+|||.+.......
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~-- 158 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDV-- 158 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCcc--
Confidence 99999999998766667899999999999999999999998 9999999999999999999999999997653221
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||.+.+..++.++||||||+++|+|++ |+.||....... .... +..+...
T Consensus 159 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~-~~~~---------~~~~~~~ 223 (261)
T cd05148 159 -----YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE-VYDQ---------ITAGYRM 223 (261)
T ss_pred -----ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH-HHHH---------HHhCCcC
Confidence 11123345678999999998899999999999999999998 888986543211 1111 1112223
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..+..+++.+.+++.+|++.+|++||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 224 PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 3456677889999999999999999999999999875
No 109
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.3e-37 Score=351.04 Aligned_cols=287 Identities=20% Similarity=0.234 Sum_probs=207.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC---CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
..+|++.+.||+|+||.||+|... .++.||+|.+... +.+.+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 467999999999999999999753 3678999987643 24567999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|++ +++|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 166 e~~-~~~l~~~l~~--~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKY-KCDLFTYVDR--SGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhc-CCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 999 4789998843 346899999999999999999999999 9999999999999999999999999997654322
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchh--HHHHHHHhhcccchhhccC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNI--VREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 857 (956)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ..+..
T Consensus 240 ~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~------~~~~~ 308 (392)
T PHA03207 240 D-----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSII------RCMQV 308 (392)
T ss_pred c-----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHH------HHhcc
Confidence 1 11223456999999999999999999999999999999999999999754321 11111100 00000
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
....++......+.+-. -+.....||...- -..+.. ...+....++|.+||++||++|+|++|+|.||||.
T Consensus 309 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHF---KQYAIVLRPPYTI-PPVIRK-----YGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred CccccCCccchhHHHHH---HhhcccccCCccc-cchhhc-----cCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 01111211111111111 1112222332110 000000 01123445789999999999999999999999997
Q ss_pred cCC
Q 002178 938 SDV 940 (956)
Q Consensus 938 ~~~ 940 (956)
...
T Consensus 380 ~~~ 382 (392)
T PHA03207 380 KEP 382 (392)
T ss_pred ccc
Confidence 643
No 110
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=5.6e-37 Score=341.65 Aligned_cols=195 Identities=26% Similarity=0.400 Sum_probs=167.0
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|... +++.||+|++.... ....+.+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999965 58899999987532 22234567888888866 799999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++.... .+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~----- 150 (321)
T cd05591 81 GDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG----- 150 (321)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC-----
Confidence 99999986543 4788899999999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~ 200 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADN 200 (321)
T ss_pred --ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCC
Confidence 11234568999999999999999999999999999999999999997543
No 111
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.4e-36 Score=344.53 Aligned_cols=209 Identities=22% Similarity=0.301 Sum_probs=177.4
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002178 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 616 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
..+.....++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3455566789999999999999999999975 68899999986422 2223467889999999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
++..++||||+++|+|.+++... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 99999999999999999998653 3778888899999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
++...... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 189 a~~~~~~~------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~ 251 (371)
T cd05622 189 CMKMNKEG------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS 251 (371)
T ss_pred eeEcCcCC------cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCC
Confidence 98654221 1112345699999999998754 37889999999999999999999997543
No 112
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.6e-37 Score=352.29 Aligned_cols=208 Identities=23% Similarity=0.317 Sum_probs=173.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.+|++.+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999964 689999999864321 22356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999997643 4788888899999999999999999 9999999999999999999999999985332100
Q ss_pred CCC------------------------------------ccccceecccccCCCcccccccccCCCCCcccchhHHHHHH
Q 002178 780 IEG------------------------------------IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFL 823 (956)
Q Consensus 780 ~~~------------------------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ 823 (956)
... ...........||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 000 00000112346999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCc
Q 002178 824 ELLTGMQPISHGK 836 (956)
Q Consensus 824 elltg~~pf~~~~ 836 (956)
||++|+.||....
T Consensus 236 ell~G~~Pf~~~~ 248 (376)
T cd05598 236 EMLVGQPPFLADT 248 (376)
T ss_pred ehhhCCCCCCCCC
Confidence 9999999997543
No 113
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.6e-36 Score=342.85 Aligned_cols=262 Identities=25% Similarity=0.382 Sum_probs=209.1
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcC-CCceeeeecccccC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE 692 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~ 692 (956)
...++|.+.+.||+|+||.||+|... .+..||||+++.... ...+.+.+|+++++++. ||||+++++++.+.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 34568889999999999999999853 134799999975433 33467899999999996 99999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 715 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~--------------------------------------------------------- 715 (956)
+..++||||+++|+|.++++...
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 99999999999999999886531
Q ss_pred -------------------------------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002178 716 -------------------------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 716 -------------------------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
...+++..+..++.|+++||+|||+.+ |+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEE
Confidence 124778888999999999999999998 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCch
Q 002178 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 837 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~ 837 (956)
+.++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~ 345 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSN-----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV 345 (400)
T ss_pred eCCCEEEEEeCCcceecccccc-----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence 9999999999999986532211 111122346788999999999999999999999999999997 8899865322
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
...... .+..+.....+..++..+.+++.+||+.+|++||++.++.+.|++..
T Consensus 346 ~~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 346 DSTFYN---------KIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred hHHHHH---------HHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111111 11111222345567788999999999999999999999999998753
No 114
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9e-37 Score=345.10 Aligned_cols=292 Identities=20% Similarity=0.272 Sum_probs=210.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccC-----
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 692 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 692 (956)
...++|++.+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 34578999999999999999999864 68999999987532 23346778899999999999999999987543
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 693 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 693 -~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
...++||||++ ++|.+.+.. .+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 94 FQDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred cceeEEEhhhhc-ccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 35799999995 577777743 3778889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||........+....
T Consensus 166 ~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~------ 231 (355)
T cd07874 166 ARTAGTS--------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI------ 231 (355)
T ss_pred cccCCCc--------cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH------
Confidence 9764321 11233468999999999999999999999999999999999999997654332221111
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC-CCHHHHH-HHHHHhHh-hCCCCCCCCccccccccCCCCCCCCCCc
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR-PSMSEVM-RELESIWN-MMPESDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~-~~L~~~~~-~~~~~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
. ..+....+....+......+....|... ..+.... +.+..... ..........+++.+||..||++|||++
T Consensus 232 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ 306 (355)
T cd07874 232 ----E-QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306 (355)
T ss_pred ----H-HhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHH
Confidence 0 1122223333333333333332222110 0100000 00000000 0011123446899999999999999999
Q ss_pred cCCCCCccccC
Q 002178 929 SMLKHPYVSSD 939 (956)
Q Consensus 929 e~L~HP~f~~~ 939 (956)
|+|+||||..-
T Consensus 307 ell~hp~~~~~ 317 (355)
T cd07874 307 EALQHPYINVW 317 (355)
T ss_pred HHhcCcchhcc
Confidence 99999999744
No 115
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=316.61 Aligned_cols=268 Identities=26% Similarity=0.390 Sum_probs=203.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHh--cCCCceeeeecccccCC----cEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEEG----EQML 697 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~~----~~~L 697 (956)
...+..+.||+|.||.||||.+. ++.||||++.. +..+.|.+|-++++. ++|+||++|+++-.... +++|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 34455778999999999999985 49999999974 344578888887776 57999999999876555 8999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhc------CCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTE------ADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
|+||.+.|+|.+||..+ .++|....+|+..+++||+|||+. .+|+|+|||||++|||+.+|+++.|+|||+
T Consensus 286 Vt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred EeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 99999999999999764 489999999999999999999975 367899999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCC-CC-----CcccchhHHHHHHHHHhCCCCCCCC--ch----hH
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LT-----DKSDVYSLGVVFLELLTGMQPISHG--KN----IV 839 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~sDVwS~G~ll~elltg~~pf~~~--~~----~~ 839 (956)
|..+..... ........||.+|||||++.+.. +. .+.||||+|.++|||+++...+..+ .+ ..
T Consensus 363 Al~~~p~~~-----~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 363 ALRLEPGKP-----QGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred eEEecCCCC-----CcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 988864432 22233478999999999997643 22 3689999999999999976655321 00 00
Q ss_pred HHHHHHhhcccchhh--ccCCCCCCChH-----HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCC
Q 002178 840 REVNIAYQSSMMFSV--IDGNMGSYPSE-----CVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMP 903 (956)
Q Consensus 840 ~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~ 903 (956)
..+...-..+.+.+. -+..++.+|+. ....+.+.+..||..|++.|-|+.=+.+++..+....+
T Consensus 438 ~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 000000000111111 12334445543 35678899999999999999999988888877654443
No 116
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.2e-36 Score=337.90 Aligned_cols=280 Identities=20% Similarity=0.295 Sum_probs=209.2
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHh-cCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|... +++.||+|+++... ....+.+..|.+++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999965 58899999987532 1223445667776665 4899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~----- 150 (316)
T cd05592 81 GDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE----- 150 (316)
T ss_pred CcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-----
Confidence 99999997643 4888899999999999999999998 9999999999999999999999999997543211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.... +....+.+|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-~~~~~~----------i~~~~~~~~~ 217 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-DELFDS----------ILNDRPHFPR 217 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-HHHHHH----------HHcCCCCCCC
Confidence 122345689999999999999999999999999999999999999975433 111111 1112234455
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~-~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
..+..+.+++.+|++.+|.+||++. ++.+. . + +...+ .+.+.+ -...|.-++.......+++|.....
T Consensus 218 ~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h-~-~---~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (316)
T cd05592 218 WISKEAKDCLSKLFERDPTKRLGVDGDIRQH-P-F---FRGID---WERLEK-REIPPPFKPKVKSPSDASNFDREFT 286 (316)
T ss_pred CCCHHHHHHHHHHccCCHHHcCCChHHHHcC-c-c---cCCCC---HHHHHh-CCCCCCcCCCCCCcchhhhcCcccc
Confidence 5667788999999999999999875 33221 0 0 00000 001111 1234555666777777888754443
No 117
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.9e-36 Score=327.08 Aligned_cols=256 Identities=29% Similarity=0.492 Sum_probs=210.9
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..++|++.+.||+|++|.||+|...+++.||+|.++.... ..+++.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM-DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc-cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 4567889999999999999999987788999999875433 356789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 99999999997655556899999999999999999999998 99999999999999999999999999987642211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
........+..|+|||++.+..++.++||||||+++|||++ |+.||........ ... +......
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~---------~~~~~~~ 223 (261)
T cd05068 159 -----EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV-LQQ---------VDQGYRM 223 (261)
T ss_pred -----cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH-HHH---------HHcCCCC
Confidence 01111223457999999999999999999999999999999 9988865432111 111 1111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..+..++..+.+++.+|++.+|.+||++.++.+.|++
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 224 PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 3345567889999999999999999999999999875
No 118
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.9e-36 Score=330.55 Aligned_cols=256 Identities=28% Similarity=0.503 Sum_probs=209.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC------CcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~ 695 (956)
.++|.+.+.||+|+||.||+|...+ ++.||||.++..... ..+.+.+|++++++++|+||+++++++......
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 83 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP 83 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence 3568888999999999999998633 478999998765444 457899999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcC------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 696 MLVYEFMSNGTLRDQLSAKS------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
++||||+++++|.+++...+ ...+++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCe
Confidence 99999999999999997542 235788999999999999999999998 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~ 842 (956)
+||+|||+++....... ........+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 161 ~kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~-~~ 234 (280)
T cd05049 161 VKIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE-VI 234 (280)
T ss_pred EEECCcccceecccCcc-----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-HH
Confidence 99999999975432211 011123345678999999999999999999999999999998 999987543321 11
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
. .+..+.....+..++..+.+++.+||+.+|++||++.++++.|+
T Consensus 235 ~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 235 E---------CITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred H---------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 1 11122233345567788999999999999999999999998875
No 119
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=333.66 Aligned_cols=261 Identities=29% Similarity=0.480 Sum_probs=222.9
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEeCC---C--cEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGILPD---G--TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~---~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
.....+.....++||.|-||.||+|.+.+ | -.||||..+.+ .....+.|..|..+|+.++||||++++|+|.+.
T Consensus 384 yel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~ 463 (974)
T KOG4257|consen 384 YELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ 463 (974)
T ss_pred ceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc
Confidence 33444555567899999999999999532 2 36899998874 344567899999999999999999999999864
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
..++|||.++-|.|+.|++.+ +..++......++.||+.||+|||+.. +|||||..+|||+.+...||++|||++
T Consensus 464 -P~WivmEL~~~GELr~yLq~n-k~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLS 538 (974)
T KOG4257|consen 464 -PMWIVMELAPLGELREYLQQN-KDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLS 538 (974)
T ss_pred -ceeEEEecccchhHHHHHHhc-cccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchh
Confidence 789999999999999999765 456888999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
+......++.. +...-..-|||||.+.-.+++.++|||.|||++||++. |..||+...+ .+.+
T Consensus 539 R~~ed~~yYka------S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN----------sDVI 602 (974)
T KOG4257|consen 539 RYLEDDAYYKA------SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN----------SDVI 602 (974)
T ss_pred hhccccchhhc------cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc----------cceE
Confidence 99876554321 22234567999999999999999999999999999998 9999986543 2345
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+-.+.+.+.|+.|++.++.++.+||..+|.+||.+.++...|.++..
T Consensus 603 ~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 603 GHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 5566678889999999999999999999999999999999999988865
No 120
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.2e-36 Score=330.88 Aligned_cols=260 Identities=29% Similarity=0.510 Sum_probs=213.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.+|.+.+.||+|+||.||+|... ++..+++|.+........+.+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777889999999999999742 356799999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 698 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
||||+++++|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999997532 234789999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~ 842 (956)
+||+|||++........ ........++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ..
T Consensus 162 ~~l~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~ 235 (291)
T cd05094 162 VKIGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE-VI 235 (291)
T ss_pred EEECCCCcccccCCCce-----eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 99999999976532211 111223446788999999999999999999999999999999 999986544321 11
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.. +..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++.+.
T Consensus 236 ~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 236 EC---------ITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HH---------HhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11 112222233445667899999999999999999999999999998664
No 121
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=354.50 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=207.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-C-CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-D-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++++.++||||+++++++..++..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888999999999999999854 4 6788999876555555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 703 SNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 703 ~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
++|+|.++++.. ...++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~- 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV- 223 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcc-
Confidence 999999988642 3446889999999999999999999998 9999999999999999999999999998654221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||...... +... .+..+...
T Consensus 224 ----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-~~~~---------~~~~~~~~ 289 (478)
T PTZ00267 224 ----SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-EIMQ---------QVLYGKYD 289 (478)
T ss_pred ----ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHHhCCCC
Confidence 111233456999999999999999999999999999999999999999754321 1111 12222333
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
..+..++..+.+++..|+..+|++||++.+++.
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 445566778999999999999999999998864
No 122
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.3e-36 Score=337.48 Aligned_cols=279 Identities=23% Similarity=0.335 Sum_probs=208.7
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHh-cCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|... +++.||+|+++... ....+.+..|..+++. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 57899999987532 1223456677787776 4899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 150 (316)
T cd05619 81 GDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD----- 150 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-----
Confidence 9999999754 34788889999999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......||..|+|||++.+..++.++|||||||++|||++|+.||...... +.... +......+|.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~----------i~~~~~~~~~ 217 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE-ELFQS----------IRMDNPCYPR 217 (316)
T ss_pred --CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH-HHHHH----------HHhCCCCCCc
Confidence 1123456899999999999999999999999999999999999999754321 11111 0111122344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH-HHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMS-EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~-~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
.....+.+++.+|++.+|.+||++. ++.+. ..+.+.+ ...+. ...++|.-++...+...+.||....
T Consensus 218 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h-----~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (316)
T cd05619 218 WLTREAKDILVKLFVREPERRLGVKGDIRQH-----PFFREID---WSALE-EREIEPPFKPKVKSANDCSNFDKEF 285 (316)
T ss_pred cCCHHHHHHHHHHhccCHhhcCCChHHHHcC-----cccCCCC---HHHHH-hCCCCCCcCCCCCCccchhhcChhh
Confidence 4566778888888888888888886 33211 0111110 01111 1245566777888888888875544
No 123
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.9e-36 Score=326.05 Aligned_cols=255 Identities=31% Similarity=0.480 Sum_probs=210.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.+|++.+.||+|+||.||+|.+. +++.||+|.+.... ...+++.+|++++++++|+||+++++++..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45778889999999999999965 58899999987543 33467899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.......+++..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~-- 159 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY-- 159 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee--
Confidence 9999999997766667899999999999999999999998 99999999999999999999999999986543211
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+..... .......
T Consensus 160 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-~~~~~~~---------~~~~~~~ 225 (263)
T cd05052 160 ----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELL---------EKGYRME 225 (263)
T ss_pred ----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHH---------HCCCCCC
Confidence 11112234568999999999999999999999999999998 8888865332 2221111 1111223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.+..++..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 226 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 4556678899999999999999999999999998865
No 124
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.4e-36 Score=330.09 Aligned_cols=261 Identities=30% Similarity=0.493 Sum_probs=212.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe------CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|.+.+.||+|+||+||++.. .++..+|+|.+........+.+.+|++++++++|+||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 45788899999999999999984 235679999988766566678999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhcC-----------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEE
Q 002178 697 LVYEFMSNGTLRDQLSAKS-----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 765 (956)
+||||+++++|.+++.... ...+++..++.++.|++.||+|||+++ ++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEE
Confidence 9999999999999997532 234899999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002178 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 844 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~ 844 (956)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||...... +....
T Consensus 161 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~ 234 (288)
T cd05093 161 IGDFGMSRDVYSTDY-----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIEC 234 (288)
T ss_pred eccCCccccccCCce-----eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH
Confidence 999999976532211 111122335678999999999899999999999999999998 88888654321 11111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 845 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
+..+.....+..++..+.+++.+||+.+|.+||++.++.+.|+++.+.
T Consensus 235 ---------i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ---------ITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred ---------HHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 111122223344567799999999999999999999999999988654
No 125
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.4e-36 Score=332.51 Aligned_cols=257 Identities=24% Similarity=0.372 Sum_probs=202.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.|+..+.||+|+||.||++... +++.||+|.+..... .....+.+|+.++++++|++|+++++++.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677889999999999999965 689999998865322 223467789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 999999999997655566899999999999999999999998 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.........
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~------------------- 210 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR------------------- 210 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH-------------------
Confidence 112346899999999999999999999999999999999999999643221000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCC-----CccCCCCCc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS-----SSSMLKHPY 935 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s-----a~e~L~HP~ 935 (956)
+.... +... .+. .......+...+++++||+.||++|+| ++|+++|||
T Consensus 211 ----~~~~~---~~~~----~~~----------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 211 ----EEVER---LVKE----VQE----------------EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred ----HHHHh---hhhh----hhh----------------hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 00000 0000 000 000111223347888899999999999 899999999
Q ss_pred ccc
Q 002178 936 VSS 938 (956)
Q Consensus 936 f~~ 938 (956)
|..
T Consensus 264 ~~~ 266 (285)
T cd05630 264 FKQ 266 (285)
T ss_pred hhc
Confidence 975
No 126
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-36 Score=316.92 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=202.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHh--cCCCceeeeecccccC----CcEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSR--LHHRNLVSLVGYCDEE----GEQM 696 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~nIv~l~~~~~~~----~~~~ 696 (956)
..+....+.||+|.||.||+|.| .|+.||||++.. ..++.+.+|.++++. ++|+||+.|++.-..+ .+.+
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred hheeEEEEEecCccccceeeccc-cCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 45677789999999999999999 478999999974 335577888888876 4999999999886433 3789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-----cCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-----EADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
||++|.+.|||+|||.+ ..++....++++..+|.||+|||. +|+|.|.|||||+.|||+.+++...|+|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 99999999999999965 458899999999999999999994 5889999999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCC----C--CCcccchhHHHHHHHHHhC----------CCCCCCC
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----L--TDKSDVYSLGVVFLELLTG----------MQPISHG 835 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~--~~~sDVwS~G~ll~elltg----------~~pf~~~ 835 (956)
|........ . -.-......||.+|||||++...- + -..+||||||.++||+..+ +.||.+-
T Consensus 363 Av~h~~~t~--~-idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 363 AVRHDSDTD--T-IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred eEEecccCC--c-ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 987654321 1 122234567999999999996531 1 2358999999999999863 3466432
Q ss_pred ---chhHHHHHHHhhcccchhhccCCCCCC-----ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 836 ---KNIVREVNIAYQSSMMFSVIDGNMGSY-----PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 836 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+...++....+- ++..++.+ ..+....+.++|+.||..+|..|-++-.+.+.|.++.+
T Consensus 440 Vp~DPs~eeMrkVVC-------v~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVC-------VQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhccee-------ecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 222222222111 11222333 35677899999999999999999999988888877654
No 127
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9e-37 Score=340.31 Aligned_cols=194 Identities=28% Similarity=0.422 Sum_probs=164.6
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHH-HHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|... +|+.||+|++..... ...+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999975 689999999874322 12234555554 56789999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~------ 149 (323)
T cd05575 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH------ 149 (323)
T ss_pred CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccC------
Confidence 9999999754 35888899999999999999999999 999999999999999999999999998753211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~ 199 (323)
T cd05575 150 -SKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 199 (323)
T ss_pred -CCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999754
No 128
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.1e-36 Score=338.18 Aligned_cols=194 Identities=26% Similarity=0.409 Sum_probs=165.5
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|... +|+.||+|.++.... ...+.+..|.+++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 689999999875321 2234566787877754 899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..+..++.|+++||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~------ 149 (316)
T cd05620 81 GDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG------ 149 (316)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccC------
Confidence 9999998764 34788899999999999999999999 999999999999999999999999998743211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~ 199 (316)
T cd05620 150 -DNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGD 199 (316)
T ss_pred -CCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999654
No 129
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=307.90 Aligned_cols=283 Identities=19% Similarity=0.318 Sum_probs=216.4
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeeccccc
Q 002178 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDE 691 (956)
Q Consensus 614 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~ 691 (956)
-+++|+...|+ +.||+|+|++|--++ +.+|..+|||++.+.....++++.+|++++..-+ |+||+.++++|++
T Consensus 73 g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 45778887774 579999999999988 6789999999998876667789999999999885 9999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEEEe
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVAD 768 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~D 768 (956)
++..|||||.|.||+|..+|+++. .+++.++.+++++|+.||.|||.+| |.|||+||+|||..+-. -+||+|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCD 222 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICD 222 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeec
Confidence 999999999999999999997653 4899999999999999999999999 99999999999997654 489999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCchhH-HHH
Q 002178 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REV 842 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~-~~~ 842 (956)
|.++.-......-............|+..|||||+.. ...|+.+.|.||+|+++|-|++|+.||...-... .|.
T Consensus 223 fDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWd 302 (463)
T KOG0607|consen 223 FDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWD 302 (463)
T ss_pred cccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCcc
Confidence 9887654322211122233345567999999999874 2458889999999999999999999996421100 000
Q ss_pred ----HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccC
Q 002178 843 ----NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHT 918 (956)
Q Consensus 843 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~ 918 (956)
-...+ ..+++-|......+|++.|..+. ..+.|+++.+|.
T Consensus 303 rGe~Cr~CQ-~~LFesIQEGkYeFPdkdWahIS-----------------------------------~eakdlisnLlv 346 (463)
T KOG0607|consen 303 RGEVCRVCQ-NKLFESIQEGKYEFPDKDWAHIS-----------------------------------SEAKDLISNLLV 346 (463)
T ss_pred CCCccHHHH-HHHHHHHhccCCcCChhhhHHhh-----------------------------------HHHHHHHHHHHh
Confidence 00000 01112222222333443333332 233478888999
Q ss_pred CCCCCCCCCccCCCCCccccCCCC
Q 002178 919 SKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 919 ~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
.|+..|.+|.+.++|||++.....
T Consensus 347 rda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 347 RDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred ccHHhhhhhhhccCCccccccchh
Confidence 999999999999999999776553
No 130
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-36 Score=340.94 Aligned_cols=281 Identities=24% Similarity=0.365 Sum_probs=206.2
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccC-----
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE----- 692 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~----- 692 (956)
...++|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|++++++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34678999999999999999999964 688999999875322 2345678899999999999999999987533
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 693 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 693 -~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
...++++|++ +++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+||++++++.+||+|||+
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVKC---QKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 4578999998 8899988753 34889999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||....... ......
T Consensus 165 ~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~---- 229 (343)
T cd07878 165 ARQADDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIM---- 229 (343)
T ss_pred ceecCCC----------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHH----
Confidence 9865321 123458899999999977 568899999999999999999999996543321 111110
Q ss_pred chhhccCCCCCCChHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 851 MFSVIDGNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
.. .+..+.+....+.. ........-|. .|. .+ + ...+...++...+++.+||..||++|+|++|
T Consensus 230 --~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~----~---~~~~~~~~~~~~~li~~mL~~dp~~R~s~~e 294 (343)
T cd07878 230 --EV----VGTPSPEVLKKISSEHARKYIQSLPH-MPQ-QD----L---KKIFRGANPLAIDLLEKMLVLDSDKRISASE 294 (343)
T ss_pred --HH----hCCCCHHHHHhcchhhHHHHhhcccc-ccc-hh----H---HHhccCCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 00 01111111111100 00111111111 110 00 1 1112233445678999999999999999999
Q ss_pred CCCCCcccc
Q 002178 930 MLKHPYVSS 938 (956)
Q Consensus 930 ~L~HP~f~~ 938 (956)
+|+||||..
T Consensus 295 ll~hp~~~~ 303 (343)
T cd07878 295 ALAHPYFSQ 303 (343)
T ss_pred HhcCcchhc
Confidence 999999975
No 131
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.5e-36 Score=329.18 Aligned_cols=258 Identities=28% Similarity=0.480 Sum_probs=207.4
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 693 (956)
+.+++|++.+.||+|+||.||+|.+. .+..||+|++.... .....++.+|+.+++.++|+||+++++++.+..
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45778999999999999999998753 25679999886433 334567889999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEE
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 765 (956)
..++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEE
Confidence 9999999999999999997532 124577888999999999999999998 99999999999999999999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002178 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 844 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~ 844 (956)
|+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... .+....
T Consensus 160 l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-~~~~~~ 233 (277)
T cd05062 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-EQVLRF 233 (277)
T ss_pred ECCCCCccccCCcce-----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-HHHHHH
Confidence 999999876532221 011112345678999999999899999999999999999999 6788864332 111111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 845 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+........+..++..+.+++.+|++.+|++||++.++++.++
T Consensus 234 ---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 234 ---------VMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred ---------HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 1122223345566778999999999999999999999998875
No 132
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2.1e-36 Score=337.32 Aligned_cols=241 Identities=20% Similarity=0.332 Sum_probs=194.3
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
+|++.+.||+|+||+||+|... +++.||+|++..... .....+..|.+++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999965 578999999875322 2234566788888777 5899999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 9999999999986543 4888999999999999999999998 9999999999999999999999999987542211
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... +.. ..
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-~~~~~---------i~~-~~ 217 (323)
T cd05616 156 -------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQS---------IME-HN 217 (323)
T ss_pred -------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-HHHHH---------HHh-CC
Confidence 1123456899999999999999999999999999999999999999754432 11111 111 11
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSM 888 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 888 (956)
..+|...+.++.+++.+|++.+|.+|++.
T Consensus 218 ~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 23455566778888888888888888874
No 133
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.5e-36 Score=329.46 Aligned_cols=200 Identities=28% Similarity=0.411 Sum_probs=174.0
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
|+..+.||+|+||+||+|... +++.||+|.+...... ....+.+|++++++++|+||+++++++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999964 6899999998654322 234578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-- 156 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE-- 156 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC--
Confidence 99999999987655557999999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~ 205 (285)
T cd05632 157 ------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRK 205 (285)
T ss_pred ------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 1123468999999999999899999999999999999999999997543
No 134
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.5e-36 Score=323.96 Aligned_cols=254 Identities=30% Similarity=0.479 Sum_probs=208.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.++|++.++||+|+||.||+|...++..||+|.+..... ..+.+.+|+.++++++|+|++++++++. ....++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 457889999999999999999988888899999875433 3457899999999999999999999885 45689999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.++++......+++..++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9999999998755556899999999999999999999998 99999999999999999999999999976543211
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +.... +......+
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~-~~~~~---------~~~~~~~~ 223 (260)
T cd05070 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR-EVLEQ---------VERGYRMP 223 (260)
T ss_pred ----ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH-HHHHH---------HHcCCCCC
Confidence 11112235668999999988899999999999999999999 88888654321 11111 11112223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
.+...+..+.+++.+|+..+|++||++.++.+.|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 455667889999999999999999999999988874
No 135
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.6e-36 Score=336.05 Aligned_cols=262 Identities=27% Similarity=0.456 Sum_probs=207.3
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeeccccc-
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 691 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 691 (956)
...++|++.+.||+|+||.||+|... +++.||+|+++.... ...+.+.+|+++++++ +|+||++++++|..
T Consensus 4 ~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 4 FPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred cCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 34568999999999999999999642 257899999875432 2345678899999999 79999999998854
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------------------------------------------------
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKS-------------------------------------------------------- 715 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~-------------------------------------------------------- 715 (956)
+...++||||+++++|.+++....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 457889999999999999986422
Q ss_pred ---CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceeccc
Q 002178 716 ---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVV 792 (956)
Q Consensus 716 ---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~ 792 (956)
..++++..+.+++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++.+..... .......
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~ 235 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDA 235 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCC
Confidence 126789999999999999999999998 99999999999999999999999999987532211 1112233
Q ss_pred ccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHH
Q 002178 793 KGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI 871 (956)
Q Consensus 793 ~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 871 (956)
.++..|+|||++.+..++.++|||||||++|||++ |..||........ ..... ..+.....+......+.
T Consensus 236 ~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~ 306 (337)
T cd05054 236 RLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEE-FCRRL--------KEGTRMRAPEYATPEIY 306 (337)
T ss_pred CCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHH-HHHHH--------hccCCCCCCccCCHHHH
Confidence 45678999999999999999999999999999998 9999864322111 11111 11112233455667899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 872 KLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 872 ~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
+++.+||+.+|++||++.++++.|+++.
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999999998764
No 136
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=8e-36 Score=323.13 Aligned_cols=257 Identities=29% Similarity=0.464 Sum_probs=209.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC----CcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||+||+|.+.. ...||||.++..... ...++.+|+.++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 4678899999999999999999742 458999998754333 34678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 999999999999997643 36889999999999999999999998 99999999999999999999999999987642
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
... ........++..|+|||.+.+..++.++||||||+++|||++ |..||........ .. .+..
T Consensus 159 ~~~-----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~--~~--------~~~~ 223 (266)
T cd05033 159 SEA-----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV--IK--------AVED 223 (266)
T ss_pred ccc-----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHH--HH--------HHHc
Confidence 211 111122335678999999999999999999999999999998 9999865432211 11 1111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
......+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 224 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112233455678899999999999999999999999998864
No 137
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.2e-36 Score=323.26 Aligned_cols=256 Identities=31% Similarity=0.475 Sum_probs=208.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.++|++.++||+|+||.||+|.+.+...||+|.+..... ..+.+.+|++++++++|+||+++++++.+ +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 467999999999999999999987767899999875332 34578999999999999999999998754 5689999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++|+|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~-- 157 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-- 157 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc--
Confidence 9999999997654556789999999999999999999998 99999999999999999999999999976543221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||+..+..++.++|||||||++|||++ |+.||....... .... +.......
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-~~~~---------~~~~~~~~ 223 (262)
T cd05071 158 ----TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQ---------VERGYRMP 223 (262)
T ss_pred ----ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-HHHH---------HhcCCCCC
Confidence 11122346678999999998899999999999999999999 787886443211 1111 11111123
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.+.+.+..+.+++.+|++.+|++||++.++.+.|+.++
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 34567788999999999999999999999999998754
No 138
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=6.6e-37 Score=340.69 Aligned_cols=238 Identities=24% Similarity=0.310 Sum_probs=190.9
Q ss_pred CeeeeeCCeEEEEEEe----CCCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 630 TQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
+.||+|+||.||++.. .+|+.||+|++..... .....+.+|++++++++||||+++++++.+++..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3589999999875332 223467789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|+|.+++... ..+++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---- 152 (318)
T cd05582 82 GGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---- 152 (318)
T ss_pred CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC----
Confidence 99999999654 35889999999999999999999999 9999999999999999999999999987643221
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||........ ... +.. .....|
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~-~~~---------i~~-~~~~~p 218 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKET-MTM---------ILK-AKLGMP 218 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHH-HHH---------HHc-CCCCCC
Confidence 112345689999999999998899999999999999999999999975432211 111 111 112234
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHH
Q 002178 864 SECVEKFIKLALKCCQDETDARPSMSE 890 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~ 890 (956)
...+..+.+++.+|++.+|++||++.+
T Consensus 219 ~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 445566777777777777777777665
No 139
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.2e-36 Score=335.18 Aligned_cols=197 Identities=29% Similarity=0.413 Sum_probs=160.4
Q ss_pred CCeeeeeCCeEEEEEEeC---CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccc--cCCcEEEEEecCC
Q 002178 629 STQIGQGGYGKVYKGILP---DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD--EEGEQMLVYEFMS 703 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~--~~~~~~LV~e~~~ 703 (956)
..+||+|+||+||+|... ++..||+|.+..... ...+.+|++++++++||||+++++++. .+...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~--~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI--SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC--cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999964 357899998875432 346788999999999999999999884 3557899999995
Q ss_pred CCCHHHHHhhc-------CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE----cCCCcEEEEeeccc
Q 002178 704 NGTLRDQLSAK-------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL----DHKFTAKVADFGLS 772 (956)
Q Consensus 704 ~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl----~~~~~~kl~DfGla 772 (956)
++|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5888877532 1235788999999999999999999999 9999999999999 56779999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
+....... .........||+.|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~----~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLK----PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcc----cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 87643221 1112234568899999999876 45789999999999999999999999643
No 140
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=4.2e-36 Score=323.44 Aligned_cols=252 Identities=30% Similarity=0.477 Sum_probs=205.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
++|.+.+.||+|+||+||+|.+.++..||+|.+..... ...++.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc-cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 45778899999999999999987777899998875433 34678999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|+|.+++..... .+++..++.++.||+.||+|||+.+ ++|+||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---- 154 (256)
T cd05113 83 NGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE---- 154 (256)
T ss_pred CCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCc----
Confidence 9999999976433 6899999999999999999999998 9999999999999999999999999987653221
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ... .+..+.....
T Consensus 155 --~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~-~~~---------~~~~~~~~~~ 222 (256)
T cd05113 155 --YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE-TVE---------KVSQGLRLYR 222 (256)
T ss_pred --eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH-HHH---------HHhcCCCCCC
Confidence 111122335678999999998889999999999999999999 999986543211 111 1111222223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+...+..+.+++.+||+.+|.+||++.++++.++
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 4445688999999999999999999999987653
No 141
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.7e-36 Score=336.91 Aligned_cols=193 Identities=24% Similarity=0.376 Sum_probs=166.9
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|... +++.||+|+++.... ...+.+.+|+.++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 688999999975432 2234678899998888 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----- 150 (327)
T cd05617 81 GDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG----- 150 (327)
T ss_pred CcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC-----
Confidence 9999988654 35899999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~ 198 (327)
T cd05617 151 --DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 198 (327)
T ss_pred --CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence 112345689999999999999999999999999999999999999953
No 142
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=9.9e-37 Score=345.26 Aligned_cols=208 Identities=25% Similarity=0.373 Sum_probs=174.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|+..+.||+|+||+||+|... +++.||+|++.... ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999965 68999999987432 222456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999999754 35888999999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCc----------------------------cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCC
Q 002178 780 IEGI----------------------------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQP 831 (956)
Q Consensus 780 ~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~p 831 (956)
.... ..........||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 0000 000011234699999999999999999999999999999999999999
Q ss_pred CCCCc
Q 002178 832 ISHGK 836 (956)
Q Consensus 832 f~~~~ 836 (956)
|....
T Consensus 236 f~~~~ 240 (360)
T cd05627 236 FCSET 240 (360)
T ss_pred CCCCC
Confidence 97543
No 143
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.9e-36 Score=327.35 Aligned_cols=256 Identities=28% Similarity=0.488 Sum_probs=206.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-----CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++|++.+.||+|+||+||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577889999999999999984 246789999987533 3334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC---------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC
Q 002178 698 VYEFMSNGTLRDQLSAKS---------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF 762 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~ 762 (956)
||||+++++|.+++.... ...+++.....++.|++.||+|||+++ |+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 999999999999985332 234788889999999999999999998 99999999999999999
Q ss_pred cEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHH
Q 002178 763 TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVRE 841 (956)
Q Consensus 763 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~ 841 (956)
.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~ 235 (283)
T cd05090 162 HVKISDLGLSREIYSADY-----YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEV 235 (283)
T ss_pred cEEeccccccccccCCcc-----eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHH
Confidence 999999999976543221 111223345678999999998889999999999999999998 8888865332 111
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 842 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
.... ........+..++..+.+++.+|++.+|++||++.++.+.+..
T Consensus 236 ~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 236 IEMV---------RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHH---------HcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1111 1111223455667889999999999999999999999988764
No 144
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.3e-36 Score=338.04 Aligned_cols=202 Identities=28% Similarity=0.344 Sum_probs=172.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999965 68999999986421 223356788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ...+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999653 235888899999999999999999999 9999999999999999999999999987653221
Q ss_pred CCCccccceecccccCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
........||+.|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 211 (331)
T cd05597 157 ------TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 211 (331)
T ss_pred ------CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCC
Confidence 111223458999999999863 45788999999999999999999999654
No 145
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.3e-36 Score=336.16 Aligned_cols=195 Identities=25% Similarity=0.391 Sum_probs=167.0
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|... +++.||+|+++... ......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 58899999987532 12234567888888887 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~----- 150 (318)
T cd05570 81 GDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG----- 150 (318)
T ss_pred CCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC-----
Confidence 99999986543 5889999999999999999999998 9999999999999999999999999986532111
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~ 200 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD 200 (318)
T ss_pred --CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC
Confidence 11233468999999999999999999999999999999999999996543
No 146
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=6.2e-36 Score=331.29 Aligned_cols=284 Identities=22% Similarity=0.348 Sum_probs=208.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||+|+||.||++... ++..||+|.+.... .....++.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999965 68899999887542 23345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
+++++|.++++.. ..+++..+..++.|+++||.|||+ .+ ++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-- 153 (308)
T cd06615 81 MDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 153 (308)
T ss_pred cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc--
Confidence 9999999999764 457888999999999999999997 46 999999999999999999999999998754221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .. ....+... .........
T Consensus 154 -------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-~~-~~~~~~~~-~~~~~~~~~- 222 (308)
T cd06615 154 -------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-KE-LEAMFGRP-VSEGEAKES- 222 (308)
T ss_pred -------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch-hh-HHHhhcCc-cccccccCC-
Confidence 12234688999999999888899999999999999999999999965432 11 11111100 000000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC----CC--CCCCCccccccccCCCCCCCCCCccCCCCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM----PE--SDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~----~~--~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
. ......+...+....+.+.++.+.... |. .+....+|+.+|+..||++||+++|+++||
T Consensus 223 --~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 223 --H------------RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred --c------------ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 0 000001111111111111111111110 11 122345899999999999999999999999
Q ss_pred ccccC
Q 002178 935 YVSSD 939 (956)
Q Consensus 935 ~f~~~ 939 (956)
||...
T Consensus 289 ~~~~~ 293 (308)
T cd06615 289 FIKRA 293 (308)
T ss_pred hhhhc
Confidence 99653
No 147
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.7e-36 Score=333.14 Aligned_cols=285 Identities=23% Similarity=0.367 Sum_probs=207.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|.+.+.||+|+||.||+|... +++.||+|.+..... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999965 688999999864332 2344677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ ++|.+++.... ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-- 158 (301)
T cd07873 86 LD-KDLKQYLDDCG-NSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT-- 158 (301)
T ss_pred cc-cCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC--
Confidence 96 69999886543 35788999999999999999999998 9999999999999999999999999997543221
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||..... .++..... .. .+
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~------~~----~~ 222 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIF------RI----LG 222 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH------HH----cC
Confidence 11123356889999999875 4578899999999999999999999975432 22221111 00 01
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
......+..+......+....|..++.. +. ...+..++...+++.+||+.||++|+|++|+|+||||..-.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 223 TPTEETWPGILSNEEFKSYNYPKYRADC------LH---NHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred CCChhhchhhhccccccccccCcccccc------HH---hhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 1111111111110000000111111100 00 11123344556899999999999999999999999996543
No 148
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.6e-36 Score=338.53 Aligned_cols=194 Identities=29% Similarity=0.415 Sum_probs=164.8
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHH-HHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|... +|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 36999999999999964 68999999986432 122345556655 56779999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|..++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~------ 149 (325)
T cd05604 81 GELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ------ 149 (325)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCC------
Confidence 9999988654 35889999999999999999999999 999999999999999999999999998753211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~ 199 (325)
T cd05604 150 -SDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCR 199 (325)
T ss_pred -CCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCC
Confidence 11223456899999999999999999999999999999999999999754
No 149
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.2e-35 Score=320.60 Aligned_cols=255 Identities=27% Similarity=0.455 Sum_probs=209.5
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..++|++.++||+|+||.||+|..++++.||+|.+..... ...++.+|+.++++++|+||+++++++. .+..++||||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 81 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEY 81 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEc
Confidence 4567889999999999999999988899999999875443 3457899999999999999999999874 4578999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 82 MENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 99999999997766667899999999999999999999998 99999999999999999999999999976542211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||...... +..... ......
T Consensus 158 -----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~---------~~~~~~ 222 (260)
T cd05067 158 -----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP-EVIQNL---------ERGYRM 222 (260)
T ss_pred -----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH-HHHHHH---------HcCCCC
Confidence 11122345678999999998889999999999999999999 99999654322 111110 111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..+...+.++.+++.+|+..+|++||+++++...|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 2344556789999999999999999999999998874
No 150
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.1e-36 Score=336.67 Aligned_cols=206 Identities=21% Similarity=0.233 Sum_probs=168.1
Q ss_pred CCCeeeee--CCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 628 SSTQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 628 ~~~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
+.++||+| +|++||++..+ +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78899999864 78999999987543 223456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++|+|.+++.......+++..+++++.|++.||+|||+++ |+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999999997654556899999999999999999999999 9999999999999999999999998754432111000
Q ss_pred ccccceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
...........++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 214 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 214 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 000011122346778999999976 468899999999999999999999997543
No 151
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.7e-36 Score=331.06 Aligned_cols=258 Identities=26% Similarity=0.443 Sum_probs=206.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
..+|++.+.||+|+||+||+|.+. +++ .||+|.++... ....+++.+|+.+++.++||||++++|++... ..+
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~ 84 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQ 84 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cce
Confidence 356899999999999999999864 343 48999987543 34456889999999999999999999998764 577
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 85 LITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEcccccccccc
Confidence 9999999999999997643 34788889999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||...... +... ...
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~-~~~~-~~~-------- 225 (316)
T cd05108 161 ADEK-----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISS-ILE-------- 225 (316)
T ss_pred CCCc-----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH-HHHH-HHh--------
Confidence 3221 111122234678999999999999999999999999999998 99998654321 1111 111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+.....+..+...+.+++.+||+.+|.+||++.+++..+..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 226 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 111223344566788999999999999999999999999887754
No 152
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-37 Score=323.99 Aligned_cols=291 Identities=20% Similarity=0.262 Sum_probs=219.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CC-----ceeeeecccccCCc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HR-----NLVSLVGYCDEEGE 694 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----nIv~l~~~~~~~~~ 694 (956)
.+++|.+...+|+|+||.|-++.++ .+..||||+++.-. ...+...-|+++++++. +. -++.+.++|...++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~-kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD-KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH-HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 4889999999999999999999865 47899999988533 23445677999999994 22 47888999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC--------------
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------------- 760 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-------------- 760 (956)
.|+|+|.+ |.|+++++..++..+++...++.|+.|++++++|||+.+ ++|-||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCccc
Confidence 99999998 779999999988889999999999999999999999999 999999999999932
Q ss_pred ------CCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 761 ------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 761 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
+..+||+|||.|+.... .......|..|+|||++.+-.+++++||||+||||+|+.||...|+.
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e----------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqt 311 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHE----------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQT 311 (415)
T ss_pred eeccCCCcceEEEecCCcceecc----------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceeccc
Confidence 34699999999986432 22556789999999999999999999999999999999999999986
Q ss_pred CchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHH---HHHHHhcccC--CCCCCCHHHHHHHH---HHhHhhCCCCC
Q 002178 835 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFI---KLALKCCQDE--TDARPSMSEVMREL---ESIWNMMPESD 906 (956)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~l~~~c~~~~--p~~RPs~~~v~~~L---~~~~~~~~~~~ 906 (956)
.++.... .+....++++|..+..+.. ..-..+++.+ ...| .+..+.+.. ..+......+.
T Consensus 312 Hen~EHL-----------aMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~-~~k~v~~~ckpl~~~~~~~d~e~ 379 (415)
T KOG0671|consen 312 HENLEHL-----------AMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKG-KSKYVFEPCKPLKKYMLQDDLEH 379 (415)
T ss_pred CCcHHHH-----------HHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccc-cchhhhcCCccHHHHhccCcHHH
Confidence 5543321 1111223455554443331 1111133321 1111 122222222 22222222233
Q ss_pred CCCccccccccCCCCCCCCCCccCCCCCccccC
Q 002178 907 TKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 907 ~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
.+..|++++||.+||.+|+|+.|||.||||..-
T Consensus 380 ~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 380 VQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred hHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 445789999999999999999999999999753
No 153
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.4e-36 Score=329.38 Aligned_cols=280 Identities=24% Similarity=0.398 Sum_probs=207.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|+||.||+|... +|+.||+|.++..... ....+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 5788899999999999999975 6899999998643222 235678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ ++|.+++.... ..+++..++.++.||++||.|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN-GDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-- 153 (284)
T ss_pred CC-CCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC--
Confidence 96 68888876532 35899999999999999999999999 9999999999999999999999999997653221
Q ss_pred CccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||++.+. .++.++|||||||++|||++|..|+....+.......... . .+
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~------~----~~ 218 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR------L----LG 218 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH------H----hC
Confidence 112234578899999998764 4788999999999999999999998665544333222111 0 11
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+......+.++... ...+...... .+....+.......+++.+||..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 219 TPTEESWPGVSKLPDY------KPYPMYPATT----SLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred CCChHHhHHhhhcccc------cccCCCCCcc----hhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 1112222221111110 0001111000 0111223344556789999999999999999999999998
No 154
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=5.1e-36 Score=334.02 Aligned_cols=241 Identities=21% Similarity=0.327 Sum_probs=188.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~ 699 (956)
+|+..+.||+|+||+||+|... +|+.||+|++.... ....+.+..|.++++.+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4677889999999999999965 68999999987532 122346778888888885 577888999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++... ..+++..++.++.|++.||+|||+++ |+||||||+|||+++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 999999999998654 34889999999999999999999999 9999999999999999999999999987532211
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..... +.. ..
T Consensus 156 -------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-~~~~~---------i~~-~~ 217 (323)
T cd05615 156 -------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-ELFQS---------IME-HN 217 (323)
T ss_pred -------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHH---------HHh-CC
Confidence 1123346899999999999999999999999999999999999999754321 11111 111 11
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCH
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSM 888 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~ 888 (956)
..+|...+..+.+++.+|++.+|.+|++.
T Consensus 218 ~~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 218 VSYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred CCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 12334445566666677777777777664
No 155
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1e-35 Score=327.16 Aligned_cols=263 Identities=26% Similarity=0.492 Sum_probs=211.8
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccc
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 690 (956)
+....++|++.+.||+|+||.||+|... ....+|+|.+.... .....++.+|+++++++ +|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 86 (293)
T cd05053 7 WELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT 86 (293)
T ss_pred cccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc
Confidence 4455678999999999999999999864 23689999887532 23345788999999999 7999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhc--------------CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccE
Q 002178 691 EEGEQMLVYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 691 ~~~~~~LV~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 756 (956)
.++..++||||+++|+|.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||
T Consensus 87 ~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Ni 163 (293)
T cd05053 87 QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNV 163 (293)
T ss_pred CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeE
Confidence 999999999999999999999652 2346889999999999999999999998 99999999999
Q ss_pred EEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCC
Q 002178 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~ 835 (956)
+++.++.+||+|||+++........ .......++..|+|||++.+..++.++|||||||++||+++ |..||...
T Consensus 164 l~~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~ 238 (293)
T cd05053 164 LVTEDHVMKIADFGLARDIHHIDYY-----RKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI 238 (293)
T ss_pred EEcCCCeEEeCccccccccccccce-----eccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCC
Confidence 9999999999999999875432211 11122235678999999998899999999999999999998 88888654
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 836 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
... +.... +..+.....+..+...+.+++.+|++.+|.+||++.++++.|+++.
T Consensus 239 ~~~-~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 239 PVE-ELFKL---------LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CHH-HHHHH---------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 321 11111 1112222345566778999999999999999999999999998763
No 156
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.9e-36 Score=348.54 Aligned_cols=256 Identities=22% Similarity=0.327 Sum_probs=208.5
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCC----
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 693 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 693 (956)
...++|++.+.||+|+||+||+|.. .+|+.||||++.... ......+.+|+.++..++|+||+++++.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3457999999999999999999985 479999999986543 333457889999999999999999988764332
Q ss_pred ----cEEEEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEE
Q 002178 694 ----EQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 767 (956)
Q Consensus 694 ----~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 767 (956)
..++||||+++|+|.++++.. ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEEEE
Confidence 368999999999999999753 2346889999999999999999999998 9999999999999999999999
Q ss_pred eeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002178 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 768 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
|||+++....... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+...
T Consensus 186 DFGls~~~~~~~~-----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-~~~~~---- 255 (496)
T PTZ00283 186 DFGFSKMYAATVS-----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-EEVMH---- 255 (496)
T ss_pred ecccCeecccccc-----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHH----
Confidence 9999986543211 1122345699999999999999999999999999999999999999975432 22211
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 848 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
....+.....+...+..+.+++..||+.+|.+||++.++++.
T Consensus 256 -----~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 -----KTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred -----HHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 122233334566677889999999999999999999998763
No 157
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2e-35 Score=317.86 Aligned_cols=249 Identities=26% Similarity=0.440 Sum_probs=202.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|+..+.||+|++|.||+|... +++.|++|.+... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999965 6899999988643 334456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.++++......+++..++.++.|++.||.|||+.+ ++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99999999998765567899999999999999999999998 9999999999999999999999999988654321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......|++.|+|||+..+..++.++|||||||++|||++|+.||...... .... ....+....
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG-ALIL---------KIIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHHcCCCCC
Confidence 1122345788999999999999999999999999999999999999754421 1111 112222333
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.+...+..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 44455667777777887777777777776654
No 158
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.7e-35 Score=318.57 Aligned_cols=251 Identities=28% Similarity=0.460 Sum_probs=204.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
.+|++.+.||+|+||.||+|.++++..+|+|.+..... ....+.+|++++++++|+||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 35778899999999999999987778899999865332 34578889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++..... .+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--- 155 (256)
T cd05059 83 NGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--- 155 (256)
T ss_pred CCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc---
Confidence 9999999976433 6889999999999999999999999 99999999999999999999999999876532110
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||........ ... +........
T Consensus 156 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~-~~~---------~~~~~~~~~ 222 (256)
T cd05059 156 ---TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEV-VES---------VSAGYRLYR 222 (256)
T ss_pred ---cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHH-HHH---------HHcCCcCCC
Confidence 11111223457999999999999999999999999999999 7888865433211 111 111111233
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
+..++.++.+++.+||..+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445678899999999999999999999999875
No 159
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.5e-36 Score=327.01 Aligned_cols=255 Identities=26% Similarity=0.424 Sum_probs=206.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
+|++.+.||+|+||+||+|... +++.||+|+++..... ....+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4667788999999999999853 2578999998754432 24568899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhc--------------CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 698 VYEFMSNGTLRDQLSAK--------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
++||+++++|.+++... ....+++..++.++.|++.||+|||+++ |+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 99999999999998532 1234788889999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~ 842 (956)
+||+|||+++....... ........+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+..
T Consensus 163 ~kl~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~ 236 (283)
T cd05091 163 VKISDLGLFREVYAADY-----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-QDVI 236 (283)
T ss_pred eEecccccccccccchh-----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-HHHH
Confidence 99999999876532221 111223345778999999998889999999999999999998 8778865332 1211
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
. .+..+.....+..++..+.+++..||+.+|++||++.++++.|+.
T Consensus 237 ~---------~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 237 E---------MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred H---------HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1 122233344567788889999999999999999999999998864
No 160
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-35 Score=326.52 Aligned_cols=282 Identities=23% Similarity=0.358 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||+|++|.||+|..+ +++.||+|.+...... ....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57889999999999999999975 6899999998653322 234567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ ++|.+++..... .+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 85 LD-TDLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred CC-CCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 97 599998876433 6889999999999999999999998 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||++.+ ..++.++||||+|+++|||++|+.||.......+.....+. . +.
T Consensus 158 -----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~------~----~~ 222 (291)
T cd07844 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFR------V----LG 222 (291)
T ss_pred -----ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHH------h----cC
Confidence 11122346788999999876 45788999999999999999999999755433333222111 0 11
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCC--CCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESD--TKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~--~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
...++................+..++ ..+ ....+... ....+++.+||..+|++|||++|+++||||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 223 TPTEETWPGVSSNPEFKPYSFPFYPP--RPL-------INHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred CCChhhhhhhhhccccccccccccCC--hhH-------HHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 11112221111111000000111111 111 11112222 455689999999999999999999999998
No 161
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1e-35 Score=325.56 Aligned_cols=279 Identities=27% Similarity=0.403 Sum_probs=207.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|+..+.||+|++|.||+|+.. +++.||||.+..... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788999999999999999965 689999998875332 2235788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+. ++|.+++.......+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-- 154 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-- 154 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc--
Confidence 95 68999997766667899999999999999999999998 9999999999999999999999999987653221
Q ss_pred CccccceecccccCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||++.+.. ++.++|||||||++|||+||+.||............ .. ..+
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~-~~----------~~~ 218 (284)
T cd07860 155 -----RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI-FR----------TLG 218 (284)
T ss_pred -----cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HH----------HhC
Confidence 1112334678999999987644 588899999999999999999999755432221111 10 001
Q ss_pred CCChHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+......+..+...+. ..+.. +....++ .+..+....+++.+|+..||++||+++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 219 TPDEVVWPGVTSLPDYKP-SFPKWARQDFSKV----------VPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCChhhhhhhhHHHHHHh-hcccccccCHHHH----------cccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 111122222222211111 11111 1111111 12223344689999999999999999999999998
No 162
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=7.6e-36 Score=326.80 Aligned_cols=282 Identities=24% Similarity=0.381 Sum_probs=210.0
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|+||.||+|.+. +|+.||+|++..... ...+.+.+|+.++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 5788899999999999999965 689999999876442 2346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+ +++|.+++.... .++++.+++.++.||++||+|||+.+ ++|+||||+||+++.++.++|+|||.+........
T Consensus 81 ~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 999999987543 56899999999999999999999998 99999999999999999999999999986643221
Q ss_pred CccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......|+..|+|||.+.+. .++.++||||+||+++||++|+.||....+.. ....... ...
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~----------~~~ 218 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIE-QLAIVFR----------TLG 218 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHH-HHHHHHH----------HcC
Confidence 112234588899999998754 46889999999999999999977775443322 1111110 001
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
......+..+.++....-...+..++.. +....++.+....+++.+||..||++||+++++|+||||.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 219 TPNEETWPGLTSLPDYNKITFPESKPIP---------LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred CCChHHHhhccCcchhhcccCCCCCcch---------HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 1111111111111110000011111111 1122344456667899999999999999999999999984
No 163
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-35 Score=331.97 Aligned_cols=203 Identities=28% Similarity=0.329 Sum_probs=172.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.++||+|+||+||++..+ +++.||+|++..... .....+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999975 578999999864221 22345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 9999999999997632 35888899999999999999999999 9999999999999999999999999987543211
Q ss_pred CCCccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
........||+.|+|||++. ...++.++|||||||++|||++|+.||....
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~ 212 (332)
T cd05623 157 ------TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES 212 (332)
T ss_pred ------cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC
Confidence 11223356999999999986 3467889999999999999999999997543
No 164
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.2e-35 Score=317.30 Aligned_cols=253 Identities=30% Similarity=0.458 Sum_probs=206.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
++|++.+.||+|++|.||+|...++..||+|.+.... ...+.+.+|++++++++|+|++++++++. .+..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688899999999999999998777789999876533 23457889999999999999999999875 456889999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.++++......+++..+..++.|++.||+|||+.+ ++|+||||+||++++++.++|+|||.+........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc---
Confidence 999999997755556889999999999999999999998 99999999999999999999999999976542211
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......++..|+|||...+..++.++||||||+++|||++ |+.||....+.... .. +........
T Consensus 158 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~---------~~~~~~~~~ 224 (260)
T cd05069 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL-EQ---------VERGYRMPC 224 (260)
T ss_pred ---cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HH---------HHcCCCCCC
Confidence 11112335678999999998899999999999999999999 88898654332111 11 111112234
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
+...+..+.+++.+|+..+|.+||+++++.+.|++
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 225 PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 55667889999999999999999999999998875
No 165
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.8e-36 Score=334.21 Aligned_cols=237 Identities=25% Similarity=0.353 Sum_probs=187.2
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHH-HHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 689999999875322 22334555554 67889999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..+..++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----- 150 (321)
T cd05603 81 GELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE----- 150 (321)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-----
Confidence 9999988653 34788888899999999999999998 9999999999999999999999999987532111
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...... +. ......+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~---------i~-~~~~~~~~ 217 (321)
T cd05603 151 --ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-SQMYDN---------IL-HKPLQLPG 217 (321)
T ss_pred --CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-HHHHHH---------Hh-cCCCCCCC
Confidence 122345689999999999999999999999999999999999999975432 111111 11 11123344
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHH
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMS 889 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~ 889 (956)
.....+.+++.+|++.+|.+||+..
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 218 GKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCHHHHHHHHHHccCCHhhcCCCC
Confidence 4556777788888888888888764
No 166
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-35 Score=327.81 Aligned_cols=280 Identities=24% Similarity=0.440 Sum_probs=219.2
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC--------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeeccccc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 691 (956)
..++|.+.+.||+|+||.||+|... ....||+|.++... ......+.+|+++++++ +||||+++++++..
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 4467889999999999999999742 24579999887543 23346788999999999 69999999999998
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEE
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNIL 757 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NIL 757 (956)
.+..++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+++ |+||||||+||+
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEE
Confidence 899999999999999999997532 235888999999999999999999998 999999999999
Q ss_pred EcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCc
Q 002178 758 LDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGK 836 (956)
Q Consensus 758 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~ 836 (956)
+++++.+||+|||.++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~ 241 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYY-----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP 241 (314)
T ss_pred EcCCCcEEEccccccccccccccc-----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC
Confidence 999999999999999865422111 11112234567999999999899999999999999999999 888886432
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccc
Q 002178 837 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSE 916 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~ 916 (956)
. .+..... ..+.....+..++.++.+++.+|++.+|++||++.++++.|+++.....+ ...++...+
T Consensus 242 ~-~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~---~~~~~~~~~ 308 (314)
T cd05099 242 V-EELFKLL---------REGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSE---EYLDLSMPF 308 (314)
T ss_pred H-HHHHHHH---------HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcC---CceeeEEeh
Confidence 2 1111111 11112234556677889999999999999999999999999988765422 334566667
Q ss_pred cCCCCC
Q 002178 917 HTSKEE 922 (956)
Q Consensus 917 L~~dP~ 922 (956)
.+++|+
T Consensus 309 ~~~~~~ 314 (314)
T cd05099 309 EQYSPS 314 (314)
T ss_pred hhcCCC
Confidence 777663
No 167
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.8e-35 Score=317.89 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=209.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|+.. +++.||||.+... .......+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 47889999999999999999964 7899999987542 2333457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 700 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 700 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||+++|+|.+++... ....+++..++.++.|+++||+|||+++ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988642 2345788999999999999999999998 99999999999999999999999999886542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.. .......|+..|+|||.+.+..++.++||||||+++|||++|+.||............. +...
T Consensus 159 ~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~--------~~~~ 223 (267)
T cd08228 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK--------IEQC 223 (267)
T ss_pred hh-------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH--------HhcC
Confidence 21 11123457889999999998889999999999999999999999996543211111111 1111
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 858 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 858 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
..+. .+...+..+.+++.+||+.+|++||++.++++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1222 2345678899999999999999999999999998865
No 168
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.5e-35 Score=319.91 Aligned_cols=257 Identities=30% Similarity=0.500 Sum_probs=211.8
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
...++|++.+.||+|+||.||+|..++++.||||.+..... ..+++.+|++++++++|+||+++++++......++|||
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 34678999999999999999999988888999999875433 34678999999999999999999999998889999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++.......+++..+..++.|++.|+.|||+++ ++|+||||+||++++++.+||+|||.+........
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 999999999998765567899999999999999999999998 99999999999999999999999999876542110
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......++..|+|||.+.+..++.++||||+|+++||+++ |+.||...... ..... +.....
T Consensus 159 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~~~~~---------~~~~~~ 222 (261)
T cd05034 159 ------TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-EVLEQ---------VERGYR 222 (261)
T ss_pred ------hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH---------HHcCCC
Confidence 11112234568999999998889999999999999999999 99998654321 11111 111111
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
...+...+..+.+++.+|+..+|++||+++++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 22344456789999999999999999999999988874
No 169
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-35 Score=326.17 Aligned_cols=269 Identities=23% Similarity=0.376 Sum_probs=213.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.+|+..+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999985 478999999987655555667889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++... .+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~--- 169 (296)
T cd06655 99 AGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ--- 169 (296)
T ss_pred CCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc---
Confidence 999999998643 4789999999999999999999999 9999999999999999999999999987653221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......++..|+|||.+.+..++.++|||||||++|||++|+.||............. . . .......
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~-~-~------~~~~~~~ 237 (296)
T cd06655 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-T-N------GTPELQN 237 (296)
T ss_pred ----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-h-c------CCcccCC
Confidence 11223457889999999998889999999999999999999999997544322111000 0 0 0000000
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCCC
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
+... .+...+++.+|+..||++|+++++++.||||+.....
T Consensus 238 ~~~~---------------------------------------~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~ 278 (296)
T cd06655 238 PEKL---------------------------------------SPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL 278 (296)
T ss_pred cccC---------------------------------------CHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence 1111 1122356777888888999999999999999888887
Q ss_pred Cccccccccc
Q 002178 943 SNLVSGVIPT 952 (956)
Q Consensus 943 ~~~~~~~~~~ 952 (956)
+.+..+..|+
T Consensus 279 ~~~~~~~~~~ 288 (296)
T cd06655 279 SSLTPLILAA 288 (296)
T ss_pred ccCCccccch
Confidence 7777666554
No 170
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-35 Score=325.54 Aligned_cols=279 Identities=27% Similarity=0.393 Sum_probs=204.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999965 689999998864322 2245788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
++ ++|.+++.... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.....+.
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 69999886543 256899999999999999999999998 9999999999999999999999999987543221
Q ss_pred CCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......+++.|+|||++.+. .++.++|||||||++|||+||+.||............. . ..
T Consensus 156 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~-~------~~---- 218 (285)
T cd07861 156 ------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIF-R------IL---- 218 (285)
T ss_pred ------ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-H------Hh----
Confidence 112233568899999998754 57889999999999999999999997554332211110 0 00
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC-CCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETD-ARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~-~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
+......+.....+... -...+. ..+. ........++...+++++||..||++|||+++++.||||
T Consensus 219 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 219 GTPTEDVWPGVTSLPDY-KNTFPKWKKGS----------LRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred CCCChhhhhcchhhHHH-HhhccccCcch----------hHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 01111111111110000 000000 0000 001112234455689999999999999999999999998
No 171
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.8e-35 Score=335.32 Aligned_cols=264 Identities=22% Similarity=0.389 Sum_probs=210.3
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcC-CCceeeeeccc
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLH-HRNLVSLVGYC 689 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~-h~nIv~l~~~~ 689 (956)
++....++|.+.++||+|+||.||+|+++ .++.||+|+++..... ..+.+.+|++++.++. ||||+++++++
T Consensus 31 ~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~ 110 (401)
T cd05107 31 AWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC 110 (401)
T ss_pred cceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE
Confidence 35556677888999999999999999853 3468999999764322 2357889999999997 99999999999
Q ss_pred ccCCcEEEEEecCCCCCHHHHHhhcCC-----------------------------------------------------
Q 002178 690 DEEGEQMLVYEFMSNGTLRDQLSAKSK----------------------------------------------------- 716 (956)
Q Consensus 690 ~~~~~~~LV~e~~~~gsL~~~l~~~~~----------------------------------------------------- 716 (956)
...+..++||||+++|+|.+++++...
T Consensus 111 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 111 TKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 999999999999999999999975321
Q ss_pred -------------------------------------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCc
Q 002178 717 -------------------------------------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 753 (956)
Q Consensus 717 -------------------------------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 753 (956)
..+++..+..++.|++.||+|||+.+ |+||||||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp 267 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAA 267 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCc
Confidence 23677788999999999999999988 99999999
Q ss_pred ccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCC
Q 002178 754 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPI 832 (956)
Q Consensus 754 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf 832 (956)
+|||+++++.+||+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||
T Consensus 268 ~NiLl~~~~~~kL~DfGla~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~ 342 (401)
T cd05107 268 RNVLICEGKLVKICDFGLARDIMRDSN-----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY 342 (401)
T ss_pred ceEEEeCCCEEEEEecCcceecccccc-----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCC
Confidence 999999999999999999986532211 011122346788999999998889999999999999999998 88888
Q ss_pred CCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 833 SHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
............ +..+.....|..++..+.+++.+||..+|.+||++.++++.|+++
T Consensus 343 ~~~~~~~~~~~~---------~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 343 PELPMNEQFYNA---------IKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred CCCCchHHHHHH---------HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 643321111111 111112234555678899999999999999999999999999875
No 172
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.6e-35 Score=323.34 Aligned_cols=255 Identities=28% Similarity=0.479 Sum_probs=207.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.+|...++||+|+||.||++... ++..+|+|.+..........+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777889999999999999742 356899999887666667789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCC-------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002178 698 VYEFMSNGTLRDQLSAKSK-------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~-------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
||||+++++|.+++..... ..+++..++.++.|++.|++|||+.+ ++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999975432 34788999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002178 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 843 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~ 843 (956)
||+|||++........ ........+++.|+|||.+.+..++.++|||||||++|||++ |+.||........ ..
T Consensus 162 kL~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~-~~ 235 (280)
T cd05092 162 KIGDFGMSRDIYSTDY-----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA-IE 235 (280)
T ss_pred EECCCCceeEcCCCce-----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH-HH
Confidence 9999999875432210 111122335678999999999999999999999999999998 8889865433211 11
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
....+.....+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ---------~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 236 ---------CITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ---------HHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 11122222334556778999999999999999999999998875
No 173
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.3e-36 Score=333.31 Aligned_cols=241 Identities=23% Similarity=0.309 Sum_probs=188.7
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHH-HHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQ-FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~-~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||+||+|+.. +++.||+|++..... .....+..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999965 578999999875321 22234444544 56788999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++.... .+.+.....++.||++||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~----- 150 (325)
T cd05602 81 GELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN----- 150 (325)
T ss_pred CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC-----
Confidence 99999997643 4778888889999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..... .. .....+.
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i---------~~-~~~~~~~ 217 (325)
T cd05602 151 --GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE-MYDNI---------LN-KPLQLKP 217 (325)
T ss_pred --CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH-HHHHH---------Hh-CCcCCCC
Confidence 12234568999999999999999999999999999999999999997544321 11111 11 1112233
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
..+..+.+++.+|++.+|.+||+..+.+.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 218 NITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 45567778888888888888888775443
No 174
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=337.02 Aligned_cols=255 Identities=30% Similarity=0.461 Sum_probs=212.5
Q ss_pred CCCCCeeeeeCCeEEEEEEe-CCC----cEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 626 FNSSTQIGQGGYGKVYKGIL-PDG----TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~-~~~----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
....++||+|+||+||||.| ++| -+||+|++... ..+..+++.+|+-.|.+++|||+++++|+|.... ..||+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 34467899999999999996 344 46899988754 3445678999999999999999999999998765 88999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
+||+.|+|.+|++.+ +..+.....+.|..|||+||.|||++. +|||||.++|||+.+-..+||.|||+|+.+...+
T Consensus 777 q~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999874 456888899999999999999999998 9999999999999999999999999999887554
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.+ .......-.+.|||-|.+....|+.++|||||||.+||++| |..|++...- +.+.. -+-.+.
T Consensus 853 ~e-----y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--~eI~d--------lle~ge 917 (1177)
T KOG1025|consen 853 KE-----YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--EEIPD--------LLEKGE 917 (1177)
T ss_pred cc-----ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--HHhhH--------HHhccc
Confidence 22 11222334568999999999999999999999999999999 9999975321 11111 122345
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+.+.|+.|...++.++.+||..|+..||+++++...+.++..
T Consensus 918 RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 918 RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 567789999999999999999999999999999998887754
No 175
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=7.4e-35 Score=315.50 Aligned_cols=258 Identities=25% Similarity=0.407 Sum_probs=211.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|... +|+.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57899999999999999999976 7899999987632 2223567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 700 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 700 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||+++|+|.+++... ....+++..++.++.|+++||.|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998652 3345889999999999999999999999 99999999999999999999999999876542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
... ......++..|+|||.+.+..++.++|||||||++|||++|+.||............ ....+
T Consensus 159 ~~~-------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08224 159 KTT-------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEKC 223 (267)
T ss_pred CCc-------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHh--------hhhcC
Confidence 211 112345788999999999888999999999999999999999999654321111111 11112
Q ss_pred CCCCCCh-HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 858 NMGSYPS-ECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 858 ~~~~~~~-~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.....+. ..+..+.+++.+|+..+|++||++.++++.++.+.
T Consensus 224 ~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 224 DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 2233343 66778999999999999999999999999998763
No 176
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.1e-35 Score=318.60 Aligned_cols=255 Identities=29% Similarity=0.464 Sum_probs=204.5
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-C---CcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc-----
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE----- 694 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~----- 694 (956)
|++.+.||+|+||.||+|... + +..||+|+++... ......+.+|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 567889999999999999864 2 3789999987533 2334678999999999999999999998865443
Q ss_pred -EEEEEecCCCCCHHHHHhhc----CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002178 695 -QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 695 -~~LV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
.++||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 79999999999999998543 2346889999999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002178 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~ 848 (956)
|+++........ .......++..|+|||++.+..++.++|||||||++|||++ |..||....+. +...
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~-~~~~----- 226 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH-EIYD----- 226 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH-HHHH-----
Confidence 999865432211 01112234678999999988889999999999999999999 88888654321 1111
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 849 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.+..+.....+..++..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 227 ----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 227 ----YLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred ----HHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1122233345666778999999999999999999999999998864
No 177
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2e-35 Score=324.08 Aligned_cols=260 Identities=28% Similarity=0.451 Sum_probs=207.7
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 693 (956)
...++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.++++++|+||+++++++.+.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 45688999999999999999999753 24589999886543 233456888999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEE
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAK 765 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~k 765 (956)
..++||||+++|+|.+++.... ....++..+..++.|++.||.|||+++ |+||||||+||++++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 9999999999999999997532 233566778899999999999999998 99999999999999999999
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHH
Q 002178 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI 844 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~ 844 (956)
|+|||+++....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 160 L~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-~~~~~- 232 (288)
T cd05061 160 IGDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-EQVLK- 232 (288)
T ss_pred ECcCCcccccccccc-----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHH-
Confidence 999999986533221 111122235678999999999899999999999999999999 7778864332 12111
Q ss_pred HhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 845 AYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.+.++.....+..++..+.+++.+|++.+|++||++.++++.+++.
T Consensus 233 --------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 233 --------FVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred --------HHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1122223334555678899999999999999999999999888754
No 178
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.4e-35 Score=321.46 Aligned_cols=192 Identities=26% Similarity=0.427 Sum_probs=167.6
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||+|+||.||++..+ +|+.||+|.+..... ...+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999965 689999999864322 2234566799999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~-------- 149 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK-------- 149 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------
Confidence 99987766667899999999999999999999999 9999999999999999999999999987653211
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
......|+..|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 12234588999999999998899999999999999999999999964
No 179
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2e-35 Score=322.03 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=205.9
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
.+++|++.+.||+|+||.||+|.+. .+..||+|.+.... ...+..+.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 4577899999999999999999974 35789999887543 3345678999999999999999999999988889
Q ss_pred EEEEEecCCCCCHHHHHhhcCC-----CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEE
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSK-----EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKV 766 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl 766 (956)
.++||||+++++|.++++.... ..+++..+++++.||+.||+|||+.+ ++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999976432 25889999999999999999999998 99999999999998765 6999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002178 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~ 845 (956)
+|||+++........ ........+..|+|||++.+..++.++|||||||++|||++ |+.||...... +.....
T Consensus 161 ~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~-~~~~~~ 234 (277)
T cd05036 161 ADFGMARDIYRASYY-----RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ-EVMEFV 234 (277)
T ss_pred ccCccccccCCccce-----ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHH
Confidence 999999865322110 01112233568999999999999999999999999999997 99998754321 111111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
........+..++..+.+++.+|++.+|++||++.++++.|+
T Consensus 235 ---------~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 ---------TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred ---------HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 111122345556788999999999999999999999998875
No 180
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2e-35 Score=330.47 Aligned_cols=254 Identities=22% Similarity=0.250 Sum_probs=192.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||+||+++.. +++.||+|.+.... ......+.+|..++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999965 68899999986422 122345788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 Ey~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 9999999999997632 35788899999999999999999999 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 157 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~-~~~i~~~~~---- 225 (331)
T cd05624 157 ------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHEE---- 225 (331)
T ss_pred ------ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH-HHHHHcCCC----
Confidence 111223569999999999875 4678899999999999999999999975443221 111110000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCC--CCCHHHHHH
Q 002178 855 IDGNMGSYPSECVEKFIKLALKCCQDETDA--RPSMSEVMR 893 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~--RPs~~~v~~ 893 (956)
....+....+.+..+.+++.+|+...+++ |++++++++
T Consensus 226 -~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 226 -RFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred -cccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 00011111234566777777777654433 345555543
No 181
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.5e-35 Score=323.32 Aligned_cols=260 Identities=24% Similarity=0.410 Sum_probs=202.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||+|+||.||+|.. .+++.||+|.+... .....+.+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999986 46899999998654 333456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|..+. .+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 81 MDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 9999997653 3677888899999999999999999 999999999999999999999999999765321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... .
T Consensus 149 ------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~-------------------~ 203 (279)
T cd06619 149 ------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS-------------------L 203 (279)
T ss_pred ------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc-------------------c
Confidence 122346889999999999999999999999999999999999999642110000 0
Q ss_pred CChHHHHHHHHHHHHhc-ccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 862 YPSECVEKFIKLALKCC-QDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~-~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
.+ ... ..|+ ..++...|. ........+++.+|+..||++||+++|+++||||....
T Consensus 204 ~~----~~~----~~~~~~~~~~~~~~---------------~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 204 MP----LQL----LQCIVDEDPPVLPV---------------GQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred ch----HHH----HHHHhccCCCCCCC---------------CcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 00 000 0111 111111110 01122335788889999999999999999999998776
Q ss_pred CCC
Q 002178 941 SGS 943 (956)
Q Consensus 941 ~~~ 943 (956)
.++
T Consensus 261 ~~~ 263 (279)
T cd06619 261 DGN 263 (279)
T ss_pred Ccc
Confidence 654
No 182
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3e-35 Score=324.07 Aligned_cols=257 Identities=27% Similarity=0.463 Sum_probs=206.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CC--cEEEEEEecCC-ChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DG--TVVAVKRAQEG-SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~--~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV 698 (956)
++|++.+.||+|+||.||+|... ++ ..+++|.++.. .....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999865 33 35788888743 233456789999999999 799999999999999999999
Q ss_pred EecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002178 699 YEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
|||+++|+|.++++... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999996532 124788999999999999999999998 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHH
Q 002178 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVN 843 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~ 843 (956)
||+|||++...... ........+..|+|||++.+..++.++|||||||++|||++ |..||..... .+...
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-~~~~~ 229 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-AELYE 229 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-HHHHH
Confidence 99999998643211 00111223457999999998899999999999999999997 9999965432 11111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
. +..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.+.+.
T Consensus 230 ~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~ 278 (297)
T cd05089 230 K---------LPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA 278 (297)
T ss_pred H---------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1 111112233455677899999999999999999999999999887654
No 183
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.7e-35 Score=322.42 Aligned_cols=257 Identities=28% Similarity=0.469 Sum_probs=209.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCC------CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
..++|++.+.||+|+||.||+|...+ +..||+|.+.... ......+.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~ 83 (277)
T cd05032 4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP 83 (277)
T ss_pred chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence 45688899999999999999998642 3689999987543 3345678899999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEE
Q 002178 695 QMLVYEFMSNGTLRDQLSAKS--------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
.++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||
T Consensus 84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEE
Confidence 999999999999999996532 224688899999999999999999998 999999999999999999999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHH
Q 002178 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~ 845 (956)
+|||+++.....+. ........++..|+|||.+.+..++.++|||||||++||+++ |..||..... .+...
T Consensus 161 ~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~-- 232 (277)
T cd05032 161 GDFGMTRDIYETDY-----YRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-EEVLK-- 232 (277)
T ss_pred CCcccchhhccCcc-----cccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-HHHHH--
Confidence 99999876543221 111223346788999999998889999999999999999998 8888864332 11111
Q ss_pred hhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 846 YQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
.+..+.....|..++..+.+++.+||+.+|.+||++.++++.|+
T Consensus 233 -------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 233 -------FVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 11122233455666889999999999999999999999998875
No 184
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.1e-35 Score=319.94 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=203.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCc----EEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++|++.+.||+|+||+||+|.+. +++ .|++|.+..... ....++..|+..++++.||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 56788899999999999999964 444 477887764332 223567888889999999999999998864 46789
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 999999999999997543 35889999999999999999999998 99999999999999999999999999986542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
... ........++..|+|||.+.+..++.++|||||||++||+++ |+.||....... ...... .
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~--~~~~~~--------~ 226 (279)
T cd05111 162 DDK-----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE--VPDLLE--------K 226 (279)
T ss_pred CCc-----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH--------C
Confidence 211 111233457778999999999999999999999999999998 999986543211 111111 1
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+.....+..+...+..++.+||..+|.+||++.++++.++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 227 GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 11222334456678889999999999999999999999988754
No 185
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.2e-35 Score=320.58 Aligned_cols=266 Identities=27% Similarity=0.412 Sum_probs=205.6
Q ss_pred cCC-CCCCeeeeeCCeEEEEEEe-----CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccC--Cc
Q 002178 624 NNF-NSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GE 694 (956)
Q Consensus 624 ~~y-~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~ 694 (956)
++| ++.+.||+|+||+||++.. .+++.||+|.++.... .....+.+|++++++++||||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKG 82 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCce
Confidence 345 8889999999999988653 3578999999876432 3456788999999999999999999987553 46
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++++|.+++... .+++..++.++.|+++||.|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccc
Confidence 78999999999999999653 4899999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHH-HHHHHh---hccc
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR-EVNIAY---QSSM 850 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~-~~~~~~---~~~~ 850 (956)
....... ........++..|+|||.+.+..++.++||||||+++|||++|+.|+........ ...... ....
T Consensus 157 ~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05080 157 VPEGHEY----YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232 (283)
T ss_pred cCCcchh----hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhh
Confidence 5432110 0111223356679999999988899999999999999999999999864332111 000000 0001
Q ss_pred chhhccC-CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 851 MFSVIDG-NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 851 ~~~~~~~-~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
....++. ...+.+..++..+.+++..||+.+|.+||+++++++.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111111 122335567789999999999999999999999999998763
No 186
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.4e-35 Score=319.88 Aligned_cols=261 Identities=25% Similarity=0.394 Sum_probs=210.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCC-----CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeeccccc-CCc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGE 694 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~ 694 (956)
..++|++.+.||+|+||.||+|...+ +..|++|++.... ....+.+.+|+.++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 46789999999999999999999765 6889999887543 3345678899999999999999999998765 567
Q ss_pred EEEEEecCCCCCHHHHHhhcCC------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSK------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
.++++||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 8999999999999999975422 45899999999999999999999998 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhh
Q 002178 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~ 847 (956)
||+++.+...+. ........++..|+|||++.+..++.++|||||||++||+++ |+.||..... .+.....
T Consensus 161 ~g~~~~~~~~~~-----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~~-- 232 (280)
T cd05043 161 NALSRDLFPMDY-----HCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-FEMAAYL-- 232 (280)
T ss_pred CCCcccccCCce-----EEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-HHHHHHH--
Confidence 999986532221 011122345678999999998889999999999999999999 9999975432 2211111
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 848 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
..+.....+..+++.+.+++.+||..+|++||++.++++.|+++.+
T Consensus 233 -------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 233 -------KDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred -------HcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111122334456788999999999999999999999999998754
No 187
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=331.44 Aligned_cols=251 Identities=27% Similarity=0.428 Sum_probs=210.7
Q ss_pred CCCCeeeeeCCeEEEEEEeC--CCc--EEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 627 NSSTQIGQGGYGKVYKGILP--DGT--VVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 627 ~~~~~lG~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
...++||+|.||.|++|.|. +|+ .||||.++..... ...+|++|+.+|.+|+|+|++++||+..+ ...++|||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 34578999999999999986 344 5899999876555 46799999999999999999999999987 678899999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++.|||.+.|++.....|-......++.|||.||.||..++ +|||||.++|+|+-..-.|||+|||+.+-+...+..
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 99999999999866678889999999999999999999999 999999999999999999999999999987654321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
- .......-...|+|||.+....++.++|||+|||++|||+| |..||...... +.+ ..+-++++.
T Consensus 269 Y----vm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-qIL---------~~iD~~erL 334 (1039)
T KOG0199|consen 269 Y----VMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-QIL---------KNIDAGERL 334 (1039)
T ss_pred e----EecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-HHH---------HhccccccC
Confidence 1 11122334568999999999999999999999999999999 78888654321 111 112234556
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
.-|+.|++.++++++.||..+|++||++.++.+.+
T Consensus 335 pRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 335 PRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred CCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 67899999999999999999999999999997544
No 188
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.9e-35 Score=316.06 Aligned_cols=248 Identities=27% Similarity=0.415 Sum_probs=200.0
Q ss_pred eeeeeCCeEEEEEEeC---CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 631 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
.||+|+||+||+|.++ ++..||+|+++... ....+++.+|+.++++++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57899999986543 233567899999999999999999999885 45678999999999
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccc
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
+|.+++... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---- 151 (257)
T cd05116 81 PLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---- 151 (257)
T ss_pred cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe----
Confidence 999999654 35889999999999999999999998 999999999999999999999999999865432210
Q ss_pred cceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 786 AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
........++..|+|||.+....++.++|||||||++|||++ |+.||...... ..... +..+.....|.
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-~~~~~---------i~~~~~~~~~~ 221 (257)
T cd05116 152 YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN-EVTQM---------IESGERMECPQ 221 (257)
T ss_pred eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH---------HHCCCCCCCCC
Confidence 011122234578999999988889999999999999999998 99999754321 11111 11122234556
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.++.++.+++.+||+.+|++||++.+|.+.|+++
T Consensus 222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 222 RCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 6778899999999999999999999999998865
No 189
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.8e-35 Score=315.10 Aligned_cols=250 Identities=29% Similarity=0.476 Sum_probs=209.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888999999999999999874 78999999986544 4568899999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.......+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999999998766557899999999999999999999999 9999999999999999999999999998653211
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.....+..|+|||.+.+..++.++||||||+++||+++ |+.||..... .+ ...... ......
T Consensus 157 -------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~-~~~~~~--------~~~~~~ 219 (256)
T cd05039 157 -------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-KD-VVPHVE--------KGYRME 219 (256)
T ss_pred -------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-HH-HHHHHh--------cCCCCC
Confidence 12234568999999998889999999999999999997 9999865432 11 111111 111223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
.+..+++.+.+++.+|+..+|++||++.+++++|+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 220 APEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 345567889999999999999999999999998875
No 190
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=3.1e-35 Score=323.07 Aligned_cols=283 Identities=23% Similarity=0.368 Sum_probs=205.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++++|.+.+.||+|+||.||+|... +++.||+|.+...... ....+.+|+++++.++|+||+++++++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999864 6899999998654322 2346788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+. +++.+++.... ..+.+..+..++.|++.||.|||+.+ |+|+||||+||+++.++++||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHP-GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 78887775433 34778888899999999999999998 9999999999999999999999999987543221
Q ss_pred CCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......++..|+|||.+.+. .++.++|||||||++|||++|+.||.......+.....+. .
T Consensus 158 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~------~---- 220 (291)
T cd07870 158 -------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWT------V---- 220 (291)
T ss_pred -------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHH------H----
Confidence 111233468899999998764 5788999999999999999999999765443322222110 0
Q ss_pred CCCCChHHHHHHHHHHH---HhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 859 MGSYPSECVEKFIKLAL---KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~---~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+....+....+..+-. ...... .++... .+..... ......+++.+|+..||++|+|++|++.|||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~-~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 221 LGVPTEDTWPGVSKLPNYKPEWFLPC--KPQQLR-------VVWKRLS-RPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred cCCCChhhhhhhhhcccccchhcccc--CCcchh-------hhccccC-CChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 01111111111111000 000000 011111 1111111 1344568999999999999999999999999
Q ss_pred c
Q 002178 936 V 936 (956)
Q Consensus 936 f 936 (956)
|
T Consensus 291 ~ 291 (291)
T cd07870 291 F 291 (291)
T ss_pred C
Confidence 8
No 191
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=320.85 Aligned_cols=204 Identities=26% Similarity=0.394 Sum_probs=182.2
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
+..+.|..-++||+||||.||-++.+ +|+.+|.|.+.+... .++...++|-.++++++.+.||.+--.|+..+..+
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 34567888899999999999999865 699999998765433 34567789999999999999999998999999999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+|+..|.||+|.-+|...+...+++..++.++.+|+.||++||++. ||.||+||+|||+|+.|++.|+|+|+|..+.
T Consensus 262 lVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999999998877778999999999999999999999999 9999999999999999999999999998775
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
... ......||.+|||||++..+.|+.+.|.||+||++|||+.|+.||...
T Consensus 339 ~g~--------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 339 EGK--------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred CCC--------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 332 223347999999999999999999999999999999999999999643
No 192
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=5.3e-35 Score=322.78 Aligned_cols=261 Identities=24% Similarity=0.400 Sum_probs=209.3
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccccC
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 692 (956)
...++|.+.+.||+|+||.||+|... ++..||||.++... ....+.+.+|+++++++ +|+||+++++++...
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 44567999999999999999999741 35589999887543 23345788999999999 799999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
+..++||||+++|+|.++++......+++.++..++.|++.||+|||+++ |+|+||||+||+++.++.+|++|||++
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999999997655455899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
+....... ........++..|+|||.+.+..++.++|||||||++|||++ |..||............ ..
T Consensus 189 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~-~~---- 258 (302)
T cd05055 189 RDIMNDSN-----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL-IK---- 258 (302)
T ss_pred ccccCCCc-----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH-HH----
Confidence 76542210 011122345678999999999999999999999999999998 99998654322111111 00
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.+.....+...+..+.+++.+|++.+|++||++.++++.|++.
T Consensus 259 ----~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 259 ----EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 1111122334567899999999999999999999999998753
No 193
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-35 Score=324.98 Aligned_cols=263 Identities=25% Similarity=0.489 Sum_probs=211.3
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC--------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccc
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD 690 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~ 690 (956)
...++|.+.+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 44678889999999999999999741 24579999887533 33456789999999999 8999999999999
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccE
Q 002178 691 EEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 691 ~~~~~~LV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 756 (956)
..+..++||||+++|+|.+++.... ...+++..+..++.||++||.|||+++ |+||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceE
Confidence 9999999999999999999997642 235788889999999999999999998 99999999999
Q ss_pred EEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCC
Q 002178 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHG 835 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~ 835 (956)
++++++.+||+|||.++....... ........++..|+|||++.+..++.++||||||+++|||++ |..||...
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~ 243 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI 243 (304)
T ss_pred EEcCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 999999999999999986643221 111222345678999999998889999999999999999998 77777543
Q ss_pred chhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 836 KNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
. ..+..... ..+.....+..++..+.+++.+||+.+|.+||++.++++.|+++...
T Consensus 244 ~-~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 244 P-VEELFKLL---------KEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred C-HHHHHHHH---------HcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 2 22222211 11112233556778899999999999999999999999999987653
No 194
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.9e-35 Score=324.81 Aligned_cols=261 Identities=26% Similarity=0.486 Sum_probs=209.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC--------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccccC
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE 692 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~ 692 (956)
.++|.+.+.||+|+||.||+|... +...||+|.++... .....++.+|+++++++ +|+||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 467999999999999999999752 23579999987542 33345788899999999 799999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCC--------------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSK--------------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
+..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||+.+ ++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 999999999999999999976421 34888999999999999999999998 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCch
Q 002178 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKN 837 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~ 837 (956)
+.++.+||+|||.++........ .......++..|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~- 247 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYY-----KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP- 247 (307)
T ss_pred cCCCcEEECCCcccccccccchh-----hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-
Confidence 99999999999998765322110 11112234568999999998889999999999999999998 888885432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
..+.... .. .......+..++..+.+++.+|+..+|++||++.++++.|+++...
T Consensus 248 ~~~~~~~-~~--------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 248 VEELFKL-LK--------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHHHHHH-HH--------cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHH
Confidence 2221111 11 1112234556678899999999999999999999999999987653
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.8e-35 Score=315.65 Aligned_cols=250 Identities=24% Similarity=0.382 Sum_probs=207.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
+|++.+.||+|+||.||++... +++.||+|.++.. .....+.+.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4788899999999999999965 6899999988643 2334567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++|+|.+++.......+++..++.++.|++.||.|||+.+ |+|+||||+||++++++.++++|||.+.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 154 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG--- 154 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc---
Confidence 9999999987655566889999999999999999999998 9999999999999999999999999987654221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||...... .... .+..+.....
T Consensus 155 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~~~~ 220 (255)
T cd08219 155 ----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWK-NLIL---------KVCQGSYKPL 220 (255)
T ss_pred ----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHH-HHHH---------HHhcCCCCCC
Confidence 1122345888999999999888999999999999999999999999754321 1111 1112223344
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
+...+..+.+++.+||+.+|++||++.+++..
T Consensus 221 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 221 PSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 55667789999999999999999999998753
No 196
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.2e-35 Score=350.08 Aligned_cols=270 Identities=25% Similarity=0.357 Sum_probs=209.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.++||+|+||.||+|... +|+.||+|++.... ....+++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999965 58999999987532 223467899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcC---------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002178 700 EFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
||+++|+|.+++.... ....++..++.++.||++||+|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999986421 123566778899999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCc-----------cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhH
Q 002178 771 LSRLAPVPDIEGI-----------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV 839 (956)
Q Consensus 771 la~~~~~~~~~~~-----------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~ 839 (956)
+++.......... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986622110000 00011123469999999999999999999999999999999999999996533211
Q ss_pred HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHhhCCC
Q 002178 840 REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPE 904 (956)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~~~~ 904 (956)
.... . ....+.......+.+..+.+++.+|+..+|++|| +++++.+.|+.+....++
T Consensus 239 i~~~-----~---~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~ 296 (932)
T PRK13184 239 ISYR-----D---VILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE 296 (932)
T ss_pred hhhh-----h---hccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence 1000 0 0011110111234567788999999999999995 677788888887665444
No 197
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=7e-35 Score=313.00 Aligned_cols=248 Identities=28% Similarity=0.465 Sum_probs=199.8
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
+.||+|+||.||+|... +++.||+|.+.... ......+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999965 78999999876433 33456789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 151 (252)
T cd05084 81 LTFLRTEG-PRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY-----AS 151 (252)
T ss_pred HHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccc-----cc
Confidence 99996543 35889999999999999999999998 99999999999999999999999999875432110 00
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHH
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 866 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (956)
......++..|+|||.+.+..++.++|||||||++|||++ |..||........ ... +........+..+
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~--~~~--------~~~~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT--REA--------IEQGVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH--HHH--------HHcCCCCCCcccC
Confidence 0111123457999999999889999999999999999998 8888864332111 111 1111122345566
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 867 VEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 867 ~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+..+.+++.+|++.+|++||++.++.+.|+
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 788999999999999999999999998875
No 198
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.1e-35 Score=320.53 Aligned_cols=258 Identities=30% Similarity=0.488 Sum_probs=206.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
+|++.+.||+|+||+||+|... ....+|+|.+..... .....+.+|+++++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 235789998875433 334678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC----------------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCccc
Q 002178 698 VYEFMSNGTLRDQLSAKS----------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 755 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 755 (956)
||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999986421 135788999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCC
Q 002178 756 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISH 834 (956)
Q Consensus 756 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~ 834 (956)
|++++++.+||+|||+++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||..
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~ 232 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSY-----VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 232 (290)
T ss_pred EEEcCCCcEEeccccccccccCccch-----hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999999765322110 11122345678999999988889999999999999999998 9888864
Q ss_pred CchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 835 GKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.. ..+.... .. .......+..++..+.+++..|++.+|++||++.++++.|+++..
T Consensus 233 ~~-~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 233 IA-PERLFNL-LK--------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CC-HHHHHHH-Hh--------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 33 2221111 11 111223355667789999999999999999999999999998753
No 199
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.8e-36 Score=332.80 Aligned_cols=250 Identities=26% Similarity=0.454 Sum_probs=196.2
Q ss_pred CCeeeeeCCeEEEEEEeC-CCcEEEEEEec---C-CChhhHHHHHHHHHHHHhcCCCceeeeecccccCC--cEEEEEec
Q 002178 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQ---E-GSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG--EQMLVYEF 701 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~---~-~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~--~~~LV~e~ 701 (956)
..+||+|+|-+||||.+. +|..||--.++ . ......++|..|+++|+.|+|+||+++++++.+.. ...+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 457999999999999975 57777632221 1 13334478999999999999999999999997654 57899999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~~ 780 (956)
|..|+|+.|.++.++ ++....+.|++||++||.|||++ +|||||||||.+||+|+. -|.|||+|+|+|......
T Consensus 125 ~TSGtLr~Y~kk~~~--vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s-- 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR--VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS-- 199 (632)
T ss_pred ccCCcHHHHHHHhcc--CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc--
Confidence 999999999987654 67778999999999999999997 589999999999999985 589999999999876432
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
....+.|||.|||||... ..|++.+||||||++++||+|+..||....+..+.++.. +.|..+
T Consensus 200 -------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV---------~SGiKP 262 (632)
T KOG0584|consen 200 -------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKV---------TSGIKP 262 (632)
T ss_pred -------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHH---------HcCCCH
Confidence 234478999999999987 789999999999999999999999998777666544432 222111
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
. .+. ...+++..+||.++|.. .++|+||.|+|.||||..+
T Consensus 263 ---~----sl~-------------------------------kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 263 ---A----ALS-------------------------------KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ---H----Hhh-------------------------------ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 0 000 01133344566666666 7788888888888888776
No 200
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=6.7e-35 Score=314.21 Aligned_cols=249 Identities=27% Similarity=0.444 Sum_probs=200.0
Q ss_pred eeeeeCCeEEEEEEeC---CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCC
Q 002178 631 QIGQGGYGKVYKGILP---DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 706 (956)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++|+||+++++++. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999864 356799999876533 23467899999999999999999999886 457899999999999
Q ss_pred HHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcccc
Q 002178 707 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 786 (956)
Q Consensus 707 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 786 (956)
|.+++... ...+++..+++++.|++.||+|||+++ ++||||||+||+++.++.+||+|||+++........ .
T Consensus 81 L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~----~ 152 (257)
T cd05115 81 LNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY----Y 152 (257)
T ss_pred HHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccc----e
Confidence 99998653 345889999999999999999999998 999999999999999999999999999765432210 0
Q ss_pred ceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChH
Q 002178 787 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSE 865 (956)
Q Consensus 787 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 865 (956)
.......++..|+|||.+.+..++.++|||||||++||+++ |..||....... ... .+..+.....+..
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~---------~~~~~~~~~~~~~ 222 (257)
T cd05115 153 KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE-VMS---------FIEQGKRLDCPAE 222 (257)
T ss_pred eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH-HHH---------HHHCCCCCCCCCC
Confidence 11122234578999999988889999999999999999996 999997543321 111 1112223344566
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 866 CVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 866 ~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+++++.+++.+||..+|++||++.++.+.|+.+
T Consensus 223 ~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 223 CPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 778999999999999999999999999998865
No 201
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.2e-35 Score=315.68 Aligned_cols=255 Identities=25% Similarity=0.444 Sum_probs=208.3
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..++|++.+.||+|+||.||+|...++..+|+|.+.... ...+.+.+|++++++++|+||+++++++.. ...++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 456889999999999999999998778889999887543 234578899999999999999999999887 788999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 82 MAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 99999999998765566889999999999999999999998 99999999999999999999999999976532211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|+|||++....++.++|||||||++||+++ |+.||........ ... . ..+...
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~-~~~-~--------~~~~~~ 222 (260)
T cd05073 158 -----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEV-IRA-L--------ERGYRM 222 (260)
T ss_pred -----ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHH-HHH-H--------hCCCCC
Confidence 11122335678999999998889999999999999999999 8889865432211 111 0 111112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..+...+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 2344566789999999999999999999999998874
No 202
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-36 Score=327.88 Aligned_cols=245 Identities=25% Similarity=0.368 Sum_probs=206.9
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHH
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 708 (956)
-+||+|.||+||.|++. +...+|||.+.....+..+-+.+|+.+.++++|.|||+++|.+.+++..-+.||.++||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999965 46679999998776666677889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCc--hhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEEEEeeccccccCCCCCCCccc
Q 002178 709 DQLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKVADFGLSRLAPVPDIEGIVP 785 (956)
Q Consensus 709 ~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~ 785 (956)
++++.+ ..++ .+.+.-.+.+||++||.|||+.. |||||||-+|||++ -.|.+||+|||-++.+..-
T Consensus 661 sLLrsk-WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi------- 729 (1226)
T KOG4279|consen 661 SLLRSK-WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI------- 729 (1226)
T ss_pred HHHHhc-cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccC-------
Confidence 999754 3445 77888889999999999999999 99999999999996 5789999999999876532
Q ss_pred cceecccccCCCcccccccccC--CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 786 AHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 786 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
........||..|||||++..+ .|..++|||||||++.||.||++||..-.+....... . -+-...+++|
T Consensus 730 nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFk---V-----GmyKvHP~iP 801 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFK---V-----GMYKVHPPIP 801 (1226)
T ss_pred CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhh---h-----cceecCCCCc
Confidence 1234456799999999999764 5889999999999999999999999754433221111 0 1123457789
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 864 SECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
++.+.+...++.+|+.++|..||++.++++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 999999999999999999999999999875
No 203
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=5.8e-35 Score=314.50 Aligned_cols=249 Identities=29% Similarity=0.479 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccc-ccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYC-DEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~-~~~~~~~LV~e~ 701 (956)
.++|++.+.||+|+||.||+|... |+.||+|.++... ..+.+.+|+.++++++|+|++++++++ ..++..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 357888999999999999999864 7789999886533 345788999999999999999999976 455678999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..++.++.|++.||+|||+++ ++||||||+||++++++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC--
Confidence 99999999998766556889999999999999999999998 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ..+..... ..+...
T Consensus 157 --------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~-~~~~~~~~---------~~~~~~ 218 (256)
T cd05082 157 --------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-LKDVVPRV---------EKGYKM 218 (256)
T ss_pred --------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC-HHHHHHHH---------hcCCCC
Confidence 12234568999999998889999999999999999998 988886432 21111111 011112
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHH
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELES 897 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~ 897 (956)
..++.++..+.+++.+|++.+|++||++.++++.|+.
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 3345667889999999999999999999999998874
No 204
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9.3e-35 Score=314.86 Aligned_cols=257 Identities=23% Similarity=0.368 Sum_probs=209.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||+|.. .+++.||||.+.... ....+++.+|+++++.++|+||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999995 478999999876422 223467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 700 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 700 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||+++++|.+++... ....+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998642 2346889999999999999999999999 99999999999999999999999999876542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
.. .......|+..|+|||++.+..++.++||||||+++|||++|..||............ .+...
T Consensus 159 ~~-------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--------~~~~~ 223 (267)
T cd08229 159 KT-------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--------KIEQC 223 (267)
T ss_pred CC-------cccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--------hhhcC
Confidence 21 1112345888999999999888999999999999999999999999643321111111 11111
Q ss_pred CCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 858 NMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 858 ~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
..+. .+...+..+.+++.+||..+|++||++.++++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 1222 2345778899999999999999999999999988765
No 205
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=6e-35 Score=328.31 Aligned_cols=262 Identities=26% Similarity=0.438 Sum_probs=205.0
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEe------CCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeecccccC-
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGIL------PDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE- 692 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~- 692 (956)
..++|++.+.||+|+||.||+|.+ .+++.||||+++.... .....+.+|++++.++ +|+||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 356899999999999999999973 2478999999875432 2345788999999999 689999999988554
Q ss_pred CcEEEEEecCCCCCHHHHHhhcC---------------------------------------------------------
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKS--------------------------------------------------------- 715 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~--------------------------------------------------------- 715 (956)
...++||||+++|+|.++++...
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 56789999999999999986431
Q ss_pred --------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 716 --------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 716 --------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
...+++..+..++.||++||+|||+++ |+||||||+||+++.++.+||+|||++........ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~ 236 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YV 236 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hh
Confidence 123678888999999999999999998 99999999999999999999999999976532110 01
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHH
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSEC 866 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (956)
......++..|+|||.+.+..++.++||||||+++|||++ |..||........... . +..+.....|...
T Consensus 237 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~--------~~~~~~~~~~~~~ 307 (343)
T cd05103 237 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR-R--------LKEGTRMRAPDYT 307 (343)
T ss_pred hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHH-H--------HhccCCCCCCCCC
Confidence 1122335678999999999899999999999999999997 8889865332111111 1 1111222233344
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 867 VEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 867 ~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
...+.+++..||+.+|++||++.++++.|+.+.+
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 5678999999999999999999999999987754
No 206
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.2e-35 Score=333.33 Aligned_cols=290 Identities=21% Similarity=0.311 Sum_probs=213.7
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC------
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------ 692 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------ 692 (956)
..++|++.+.||+|+||.||+|... +++.||+|.+... .....+.+.+|++++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999964 7899999998642 233345678899999999999999999987543
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
...++||||+. ++|.+.+... ++...+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 6898888543 788889999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
+...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+....+...
T Consensus 166 ~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~-------- 229 (353)
T cd07850 166 RTAGTSF--------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKI-------- 229 (353)
T ss_pred eeCCCCC--------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHH--------
Confidence 8653221 122345788999999999999999999999999999999999999765433222111
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHhh---CCCCCCCCccccccccCCCCCCCCCCc
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNM---MPESDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~---~~~~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
-...+..+.+....+...........+..++ .+.++.......... .........+++.+||.+||++|||++
T Consensus 230 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 306 (353)
T cd07850 230 ---IEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVD 306 (353)
T ss_pred ---HHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHH
Confidence 1112334445544444433333333332221 222221110000000 001123346899999999999999999
Q ss_pred cCCCCCcccc
Q 002178 929 SMLKHPYVSS 938 (956)
Q Consensus 929 e~L~HP~f~~ 938 (956)
|+|+||||..
T Consensus 307 eiL~~~~~~~ 316 (353)
T cd07850 307 DALQHPYINV 316 (353)
T ss_pred HHhcChhHhh
Confidence 9999999863
No 207
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=5.4e-35 Score=322.98 Aligned_cols=257 Identities=29% Similarity=0.476 Sum_probs=204.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCc--EEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|++.+.||+|+||.||+|.++ ++. .+|+|.++... ......+.+|++++.++ +|+||+++++++..++..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357888999999999999999964 454 46788776432 33456788999999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 698 VYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
||||+++|+|.++++... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCc
Confidence 999999999999997542 135788999999999999999999998 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREV 842 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~ 842 (956)
+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... +..
T Consensus 163 ~kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~ 233 (303)
T cd05088 163 AKIADFGLSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELY 233 (303)
T ss_pred EEeCccccCcccchh--------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-HHH
Confidence 999999998642210 01111224567999999988889999999999999999998 99998643321 111
Q ss_pred HHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 843 NIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.. ...+.....+...+..+.+++.+|++.+|++||++.++++.++++..
T Consensus 234 ~~---------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 234 EK---------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HH---------HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 11 11111122334456678999999999999999999999999987754
No 208
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=319.80 Aligned_cols=256 Identities=22% Similarity=0.348 Sum_probs=208.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhh--HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.-|...+.||+|.|+.|-+|++ -+|..||||++.+..... ...+.+|+++|+.++|||||++|.+......+|||+|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 4577788999999999999984 489999999998754443 4578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE-cCCCcEEEEeeccccccCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl-~~~~~~kl~DfGla~~~~~~~ 779 (956)
.-++|+|++||-++. ..+.+....+++.||+.|+.|+|+.+ +|||||||+||.+ ..-|-|||+|||.+..+.
T Consensus 98 LGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~--- 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ--- 170 (864)
T ss_pred ecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCC---
Confidence 999999999997653 35899999999999999999999999 9999999999977 556899999999987654
Q ss_pred CCCccccceecccccCCCcccccccccCCCCC-cccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTD-KSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~-~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
+.......+|+..|-|||++.+..|+. ++||||+|||||-+++|+.||+...+... +
T Consensus 171 -----PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET----------L------- 228 (864)
T KOG4717|consen 171 -----PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET----------L------- 228 (864)
T ss_pred -----CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh----------h-------
Confidence 344566778999999999999999875 68999999999999999999976543211 1
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcccc
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
..|+.|-.--|. .| .++..++|.+||+.||.+|.|.+|+..|+|++.
T Consensus 229 -------------TmImDCKYtvPs------hv--------------S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~ 275 (864)
T KOG4717|consen 229 -------------TMIMDCKYTVPS------HV--------------SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQA 275 (864)
T ss_pred -------------hhhhcccccCch------hh--------------hHHHHHHHHHHHhcCchhhccHHHHhccccccC
Confidence 122233222111 11 122236888889999999999999999999865
Q ss_pred CCC
Q 002178 939 DVS 941 (956)
Q Consensus 939 ~~~ 941 (956)
--.
T Consensus 276 ~D~ 278 (864)
T KOG4717|consen 276 GDR 278 (864)
T ss_pred CCC
Confidence 443
No 209
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6.8e-35 Score=319.07 Aligned_cols=267 Identities=28% Similarity=0.432 Sum_probs=205.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-----CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeeccccc--CCcEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQM 696 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~ 696 (956)
.+|++.+.||+|+||+||+|.. .+++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 5788899999999999999974 2578999999887666666789999999999999999999998643 34689
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 9999999999999996542 35889999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhH-HHHHHHhh----cccc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVNIAYQ----SSMM 851 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~-~~~~~~~~----~~~~ 851 (956)
..... ........++..|+|||++.+..++.++|||||||++|||++|..++....... +....... ...+
T Consensus 160 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 160 QDKEY----YKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred CCCcc----eeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 32210 001111224456999999998889999999999999999999877764322110 00000000 0000
Q ss_pred hhhcc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 852 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 852 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.+.+. ......+..++..+.+++.+||+.+|++||++.++++.|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 11111 112233455677899999999999999999999999998865
No 210
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.5e-35 Score=321.25 Aligned_cols=257 Identities=32% Similarity=0.505 Sum_probs=207.4
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
..++|++.+.||+|+||.||+|... ++..||+|.+.... ....+++.+|+.++++++||||+++++++.+++.
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~ 82 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP 82 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence 3567999999999999999999853 46789999987543 3335678999999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcC--------------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKS--------------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 754 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~ 754 (956)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~ 159 (288)
T cd05050 83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATR 159 (288)
T ss_pred cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHh
Confidence 999999999999999996431 124778889999999999999999998 999999999
Q ss_pred cEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCC
Q 002178 755 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 833 (956)
Q Consensus 755 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~ 833 (956)
||++++++.+||+|||+++........ ........+..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYY-----KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred heEecCCCceEECccccceecccCccc-----cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999998754322110 11112234567999999998999999999999999999998 888886
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 834 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
.... .+... .+.++.....+..++.++.+++.+|++.+|++||++.++++.|+
T Consensus 235 ~~~~-~~~~~---------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 235 GMAH-EEVIY---------YVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCH-HHHHH---------HHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 4332 12111 11122223334556788999999999999999999999999886
No 211
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.9e-35 Score=315.67 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=207.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CC---cEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|+..+.||+|+||.||+|... ++ ..+|+|.+.... ....+.+.+|++++++++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999964 33 379999887543 3345678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 999999999999997643 45889999999999999999999998 99999999999999999999999999876542
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.... .........+..|+|||++.+..++.++|||||||++|||++ |+.||...... +.... +..
T Consensus 160 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~-~~~~~---------i~~ 225 (268)
T cd05063 160 DPEG----TYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH-EVMKA---------IND 225 (268)
T ss_pred cccc----ceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH-HHHHH---------Hhc
Confidence 2110 111112223457999999998889999999999999999998 99999654321 11111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
....+.+.+++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 112233445677899999999999999999999999998764
No 212
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.7e-36 Score=334.42 Aligned_cols=235 Identities=23% Similarity=0.275 Sum_probs=178.5
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHHHHhc---CCCceeeeecccccCCcEEEEEecCCC
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
||+|+||+||+|+.. +++.||||++....... ...+..|..++.+. +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999965 68999999986432221 23445566666655 699999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++... ..+++..++.++.||++||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~----- 150 (330)
T cd05586 81 GELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN----- 150 (330)
T ss_pred ChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-----
Confidence 9999998754 35889999999999999999999999 9999999999999999999999999987532211
Q ss_pred ccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
.......||..|+|||++.+. .++.++|||||||++|||++|+.||...... +.... +..+......
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~-~~~~~---------i~~~~~~~~~ 218 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQ-QMYRN---------IAFGKVRFPK 218 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHH-HHHHH---------HHcCCCCCCC
Confidence 112345689999999998764 4789999999999999999999999754321 11111 0111111111
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCH
Q 002178 864 SECVEKFIKLALKCCQDETDARPSM 888 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~ 888 (956)
......+.+++.+|++.+|.+||+.
T Consensus 219 ~~~~~~~~~li~~~L~~~P~~R~~~ 243 (330)
T cd05586 219 NVLSDEGRQFVKGLLNRNPQHRLGA 243 (330)
T ss_pred ccCCHHHHHHHHHHcCCCHHHCCCC
Confidence 1234555666677777777777643
No 213
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-36 Score=324.20 Aligned_cols=244 Identities=30% Similarity=0.472 Sum_probs=205.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.|..++.||.|+||.||-|.+ ++..+||||++.....+ .-.++..|++.|++++|||++.+.|+|..+...|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 455577899999999999995 47899999998754433 34688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|| -||-.|++.-. +.++.+.++..|+.+.+.||+|||+.+ .||||||+.|||+++.|.|||+|||.|.....
T Consensus 107 YC-lGSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred HH-hccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 99 67999988654 457999999999999999999999999 99999999999999999999999999987542
Q ss_pred CCccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
....+|||.|||||++. .+.|+-++||||+|++..|+...++|++...-+...+. +...
T Consensus 179 --------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH----------IAQN 240 (948)
T KOG0577|consen 179 --------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----------IAQN 240 (948)
T ss_pred --------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH----------HHhc
Confidence 23567999999999986 47899999999999999999999999876543332222 2222
Q ss_pred CCCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 858 NMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 858 ~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
..+.. ..+++..+..++..|+++-|.+||+.+++++.
T Consensus 241 esPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 241 ESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 33333 56788999999999999999999999887653
No 214
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7e-35 Score=322.14 Aligned_cols=288 Identities=25% Similarity=0.398 Sum_probs=225.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCc----EEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+..... ....++.+|+.++++++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 456788899999999999999864 444 578898875432 2345788999999999999999999998654 567
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+|+||+++|+|.+++.... ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~v~e~~~~g~l~~~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHK-DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEcccccccccc
Confidence 9999999999999987543 35788899999999999999999998 9999999999999999999999999998654
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........++..|+|||++.+..++.++|||||||++|||++ |+.||..... .. ......
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~-~~-~~~~~~-------- 225 (303)
T cd05110 161 GDEK-----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT-RE-IPDLLE-------- 225 (303)
T ss_pred Cccc-----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH-HH-HHHHHH--------
Confidence 2211 111122345678999999999999999999999999999998 8889864321 11 111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+.....+..++..+.+++..||..+|++||++.++++.++.+... -.+.+...++.|+.+...-.|||
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 294 (303)
T cd05110 226 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD-----------PQRYLVIQGDDRMKLPSPNDSKF 294 (303)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc-----------hhhheeeccCCcCCCCCCchhhH
Confidence 1111222344567889999999999999999999999999876432 12346778999999999999999
Q ss_pred cccCCC
Q 002178 936 VSSDVS 941 (956)
Q Consensus 936 f~~~~~ 941 (956)
|..-+.
T Consensus 295 ~~~~~~ 300 (303)
T cd05110 295 FQNLLD 300 (303)
T ss_pred Hhcccc
Confidence 987543
No 215
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-34 Score=314.36 Aligned_cols=255 Identities=27% Similarity=0.434 Sum_probs=200.3
Q ss_pred CCCCCeeeeeCCeEEEEEEeCC-Cc--EEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC------Cc
Q 002178 626 FNSSTQIGQGGYGKVYKGILPD-GT--VVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------GE 694 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~~ 694 (956)
|.+.+.||+|+||.||+|.+.+ +. .||+|.++.. .....+.+.+|++++++++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3467889999999999999754 33 6899988753 233456788999999999999999999986321 25
Q ss_pred EEEEEecCCCCCHHHHHhhc----CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002178 695 QMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
.++||||+++|+|.+++... ....+++.....++.|++.||+|||+++ |+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 68999999999999987432 2345889999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 849 (956)
+++....... ........+++.|+|||+..+..++.++|||||||++|||++ |+.||...... +....
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~----- 226 (272)
T cd05075 158 LSKKIYNGDY-----YRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS-EIYDY----- 226 (272)
T ss_pred cccccCcccc-----eecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHH-----
Confidence 9987543221 011122345678999999999999999999999999999999 78888653321 11111
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+..+.....+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 227 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 227 ----LRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred ----HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 111222233455667899999999999999999999999998763
No 216
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.8e-35 Score=316.01 Aligned_cols=201 Identities=25% Similarity=0.385 Sum_probs=172.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|++.+.||+|+||.||+|.. .+++.||+|++..........+.+|+.++++++|+||+++++++..++..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 45789999999999999999996 46899999998755444455778899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.++++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06646 88 CGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI-- 160 (267)
T ss_pred CCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc--
Confidence 9999999998654 35789999999999999999999998 9999999999999999999999999998653211
Q ss_pred CccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~ 212 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCcccc
Confidence 1112345788999999984 345788999999999999999999998644
No 217
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.1e-34 Score=311.17 Aligned_cols=247 Identities=29% Similarity=0.480 Sum_probs=201.2
Q ss_pred CeeeeeCCeEEEEEEeCCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHH
Q 002178 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 708 (956)
+.||+|+||.||+|...+++.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999876443 23457889999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccce
Q 002178 709 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 788 (956)
Q Consensus 709 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 788 (956)
+++.... ..+++..+..++.|++.||.|+|+.+ ++||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 81 SFLRKKK-DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 9986543 35789999999999999999999998 99999999999999999999999999875432110 11
Q ss_pred ecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 002178 789 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 867 (956)
Q Consensus 789 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (956)
.....++..|+|||++.+..++.++||||||+++||+++ |..||........ ... +..+.....+..++
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~-~~~---------~~~~~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQA-REQ---------VEKGYRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHH-HHH---------HHcCCCCCCCCCCC
Confidence 112234568999999998899999999999999999998 9999965432211 111 11111223445567
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 868 EKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 868 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
..+.+++.+|++.+|++||++.++.+.|.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 88999999999999999999999998764
No 218
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-36 Score=301.23 Aligned_cols=261 Identities=21% Similarity=0.301 Sum_probs=205.4
Q ss_pred hcCCCCC-CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeeccccc----CCcE
Q 002178 623 TNNFNSS-TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGEQ 695 (956)
Q Consensus 623 ~~~y~~~-~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~~ 695 (956)
+++|.+. ++||-|-.|+|-.+..+ +++.+|+|++.+. ....+|++..-.. .|||||.++++|.. ...+
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4555553 57999999999999865 7899999998752 2455688754443 69999999999843 4578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeeccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLS 772 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGla 772 (956)
.+|||.|+||.|.+.++.++...+++.++-.|++||+.|+.|||+.+ |.||||||+|+|.+. +..+||+|||.|
T Consensus 135 LiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFA 211 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFA 211 (400)
T ss_pred EeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccc
Confidence 89999999999999999999999999999999999999999999999 999999999999964 557999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
+.... .......+-|+.|.|||++...+|+...|+||+||++|-|++|.+||....... -...+.
T Consensus 212 K~t~~--------~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a-------ispgMk 276 (400)
T KOG0604|consen 212 KETQE--------PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------ISPGMK 276 (400)
T ss_pred cccCC--------CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc-------CChhHH
Confidence 86432 123455678999999999999999999999999999999999999997533210 000111
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
..+...-..||.++|..+.+ .+.|+|+.+|+.+|.+|+|.+|.++
T Consensus 277 ~rI~~gqy~FP~pEWs~VSe-----------------------------------~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 277 RRIRTGQYEFPEPEWSCVSE-----------------------------------AAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hHhhccCccCCChhHhHHHH-----------------------------------HHHHHHHHHhcCCchhheeHHHhhc
Confidence 11111222345544444332 2347889999999999999999999
Q ss_pred CCccccCCC
Q 002178 933 HPYVSSDVS 941 (956)
Q Consensus 933 HP~f~~~~~ 941 (956)
|||+.+...
T Consensus 322 hpwi~~~~~ 330 (400)
T KOG0604|consen 322 HPWINQYEA 330 (400)
T ss_pred Cchhccccc
Confidence 999987655
No 219
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-34 Score=323.91 Aligned_cols=265 Identities=25% Similarity=0.472 Sum_probs=210.4
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEeC--------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecc
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGILP--------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGY 688 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~ 688 (956)
+.....+|++.+.||+|+||.||+|... .+..||+|.++... ....+++.+|+++++++ +|+||++++++
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 86 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGA 86 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEE
Confidence 3344567899999999999999999742 12368999887533 23356789999999999 79999999999
Q ss_pred cccCCcEEEEEecCCCCCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcc
Q 002178 689 CDEEGEQMLVYEFMSNGTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKAS 754 (956)
Q Consensus 689 ~~~~~~~~LV~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~ 754 (956)
+...+..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+++ |+||||||+
T Consensus 87 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~ 163 (334)
T cd05100 87 CTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAAR 163 (334)
T ss_pred EccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccc
Confidence 999999999999999999999997532 234788899999999999999999998 999999999
Q ss_pred cEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCC
Q 002178 755 NILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPIS 833 (956)
Q Consensus 755 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~ 833 (956)
||+++.++.+||+|||+++....... ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 164 Nill~~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 164 NVLVTEDNVMKIADFGLARDVHNIDY-----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred eEEEcCCCcEEECCcccceecccccc-----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999976532211 111122234567999999999999999999999999999998 888886
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 834 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
.... .+..... ..+.....+..++..+.+++.+|++.+|.+||++.++++.|+.+...
T Consensus 239 ~~~~-~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 239 GIPV-EELFKLL---------KEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred CCCH-HHHHHHH---------HcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 4332 2221111 11122233455667899999999999999999999999999988654
No 220
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2e-34 Score=311.53 Aligned_cols=204 Identities=29% Similarity=0.439 Sum_probs=173.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-----hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-----QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++|++.+.||+|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57899999999999999999964 689999998764321 123568889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++.... .+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999997643 4788889999999999999999999 99999999999999999999999999876532
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.... ........++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 157 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 211 (263)
T cd06625 157 ICSS----GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE 211 (263)
T ss_pred cccc----cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc
Confidence 2110 111123457789999999999889999999999999999999999996543
No 221
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.9e-35 Score=323.62 Aligned_cols=279 Identities=24% Similarity=0.368 Sum_probs=207.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++|+||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 47889999999999999999976 58999999886432 2234567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|..++... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNP--RGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 99998888877543 34899999999999999999999998 99999999999999999999999999987643221
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||................. ..+.
T Consensus 156 -------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~--- 222 (286)
T cd07847 156 -------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG---DLIP--- 222 (286)
T ss_pred -------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC---CCCh---
Confidence 1123357789999999876 5578899999999999999999999975543222111100000 0000
Q ss_pred CCCChHHHHHHHH---HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 860 GSYPSECVEKFIK---LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~~---l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
. ...+.. .........+..+++... .++.......+|+.+|+..||++||++.|++.||||
T Consensus 223 -----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 223 -----R-HQQIFSTNQFFKGLSIPEPETREPLES----------KFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred -----H-HhhhcccccccccccCCCcccccCHHH----------HhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0 000000 000001112222222211 122234556689999999999999999999999998
No 222
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.3e-35 Score=325.16 Aligned_cols=283 Identities=27% Similarity=0.398 Sum_probs=208.3
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh-----hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-----GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+|+..+.||+|+||.||+|... +++.||+|.+...... ....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999965 6899999998764332 235677899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+ +|+|.+++.... ..+++..++.++.||++||.|||+++ |+|+||||+||+++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 999999997644 36899999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
. .......++..|+|||.+.+ ..++.++|||||||++|||++|..||....+.. ....... .
T Consensus 156 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~------~--- 218 (298)
T cd07841 156 N-------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFE------A--- 218 (298)
T ss_pred C-------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHH------H---
Confidence 1 11122346778999999865 467889999999999999999977765443322 1111110 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
..............+...+... ..+... ....++.......+++.+|+..||++|+|++|+++||||+
T Consensus 219 -~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~ 286 (298)
T cd07841 219 -LGTPTEENWPGVTSLPDYVEFK---PFPPTP--------LKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFS 286 (298)
T ss_pred -cCCCchhhhhhccccccccccc---ccCCcc--------hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcccc
Confidence 0111111111111111111110 011100 0111223344556899999999999999999999999998
Q ss_pred cCCC
Q 002178 938 SDVS 941 (956)
Q Consensus 938 ~~~~ 941 (956)
+.-.
T Consensus 287 ~~~~ 290 (298)
T cd07841 287 NDPA 290 (298)
T ss_pred CCCC
Confidence 7543
No 223
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.5e-35 Score=326.50 Aligned_cols=284 Identities=24% Similarity=0.334 Sum_probs=204.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC---CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccC--CcEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP---DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQM 696 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~ 696 (956)
+|++.++||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999964 47899999988633 22345678899999999999999999999877 7899
Q ss_pred EEEecCCCCCHHHHHhhc---CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC----CCcEEEEee
Q 002178 697 LVYEFMSNGTLRDQLSAK---SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH----KFTAKVADF 769 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~----~~~~kl~Df 769 (956)
+||||++ ++|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 9999996 5787776532 2236889999999999999999999999 999999999999999 999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002178 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~ 848 (956)
|++......... ........++..|+|||++.+. .++.++|||||||+++||++|+.||........ ...
T Consensus 157 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~---- 227 (316)
T cd07842 157 GLARLFNAPLKP----LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIK-KSN---- 227 (316)
T ss_pred ccccccCCCccc----ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccc-ccc----
Confidence 999865432210 1112334578899999988764 578899999999999999999999964332110 000
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH----------------HHHHhHhhCCCCCCCCccc
Q 002178 849 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR----------------ELESIWNMMPESDTKTPEF 912 (956)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~----------------~L~~~~~~~~~~~~~~~~l 912 (956)
+ .....+.+++..+-...+..++.+.+..+ .+..........+....++
T Consensus 228 --------------~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (316)
T cd07842 228 --------------P-FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDL 292 (316)
T ss_pred --------------h-hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHH
Confidence 0 00011111111111111111111111100 0111111112344556789
Q ss_pred cccccCCCCCCCCCCccCCCCCcc
Q 002178 913 INSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 913 l~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
+.+||..||++|||++|+++||||
T Consensus 293 i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 293 LRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHhcCCcccCcCHHHHhcCCCC
Confidence 999999999999999999999998
No 224
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.2e-35 Score=320.15 Aligned_cols=198 Identities=36% Similarity=0.588 Sum_probs=172.4
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHH--HHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEK--EFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~--~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
|++.+.||+|+||+||++... +++.||+|.+......... ...+|+.++++++|+||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 567789999999999999975 5779999999876554432 3456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.. ...+++..++.++.|+++||+|||+.+ |+|+||||+||++++++.++|+|||.+.....
T Consensus 81 ~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~----- 150 (260)
T PF00069_consen 81 PGGSLQDYLQK--NKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSE----- 150 (260)
T ss_dssp TTEBHHHHHHH--HSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTS-----
T ss_pred ccccccccccc--ccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc-----
Confidence 99999999973 235899999999999999999999998 99999999999999999999999999875411
Q ss_pred ccccceecccccCCCcccccccc-cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.........++..|+|||++. +..++.++||||+|+++|+|++|..||...
T Consensus 151 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~ 202 (260)
T PF00069_consen 151 --NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEES 202 (260)
T ss_dssp --TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTS
T ss_pred --cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 122334556889999999998 888999999999999999999999999754
No 225
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-34 Score=318.84 Aligned_cols=200 Identities=25% Similarity=0.422 Sum_probs=175.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.+|++.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++|+||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888999999999999999964 68999999987655555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++... .+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~--- 170 (296)
T cd06654 100 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 170 (296)
T ss_pred CCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc---
Confidence 999999998643 4788899999999999999999999 9999999999999999999999999987643221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......+++.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 171 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~ 220 (296)
T cd06654 171 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN 220 (296)
T ss_pred ----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223458889999999998889999999999999999999999997544
No 226
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.1e-35 Score=325.55 Aligned_cols=280 Identities=26% Similarity=0.385 Sum_probs=206.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|++.+.||+|+||.||+|.++ +++.||+|++..... ...+.+.+|+++++.++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999976 589999998764322 234578899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.++.... ..+++..++.++.|+++||+|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 81 FVDHTVLDDLEKYP--NGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred cCCccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 99999998877543 34889999999999999999999998 9999999999999999999999999987653321
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......++..|+|||++.+ ..++.++||||||+++|||++|+.||.............. ..
T Consensus 155 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~-------~~---- 217 (286)
T cd07846 155 ------EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIK-------CL---- 217 (286)
T ss_pred ------cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHH-------Hh----
Confidence 11223457889999999875 4577899999999999999999988865443221111110 00
Q ss_pred CCCChHHHHHHH--HHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 860 GSYPSECVEKFI--KLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~--~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
....+.....+. .+..... .|... +. .......+.......+++.+|+..+|++||+++++++||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~----~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 218 GNLIPRHQEIFQKNPLFAGMR--LPEVK----EI----EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred CCCchhhHHHhccchHhhccc--ccccc----Cc----chHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000110000000 0000011 11100 00 01111233445556789999999999999999999999998
No 227
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.1e-34 Score=319.30 Aligned_cols=261 Identities=26% Similarity=0.407 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC---------------CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeee
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD---------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLV 686 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~ 686 (956)
.++|++.+.||+|+||.||++...+ ...||+|.++... ......+.+|++++++++|+||++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 4689999999999999999987532 2358999987543 33346789999999999999999999
Q ss_pred cccccCCcEEEEEecCCCCCHHHHHhhcC----------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccE
Q 002178 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKS----------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 687 ~~~~~~~~~~LV~e~~~~gsL~~~l~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 756 (956)
+++...+..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||
T Consensus 84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Ni 160 (295)
T cd05097 84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNC 160 (295)
T ss_pred EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhE
Confidence 99999999999999999999999986532 123688899999999999999999998 99999999999
Q ss_pred EEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCCC
Q 002178 757 LLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPISH 834 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt--g~~pf~~ 834 (956)
++++++.+||+|||++........ ........++..|+|||++.+..++.++|||||||++|||++ |..||..
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred EEcCCCcEEecccccccccccCcc-----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999976532211 111223345678999999998899999999999999999998 5667754
Q ss_pred CchhH--HHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 835 GKNIV--REVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 835 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
..... ......+... ........+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 236 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 236 LSDEQVIENTGEFFRNQ-----GRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cChHHHHHHHHHhhhhc-----cccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 32211 1111101000 001111223345678999999999999999999999998875
No 228
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-35 Score=348.65 Aligned_cols=291 Identities=20% Similarity=0.240 Sum_probs=200.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeCC--CcEEEEE------------------EecCCChhhHHHHHHHHHHHHhcCCCc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILPD--GTVVAVK------------------RAQEGSLQGEKEFLTEIQFLSRLHHRN 681 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK------------------~~~~~~~~~~~~~~~E~~~l~~l~h~n 681 (956)
..++|++.+.||+|+||+||+|..+. +..+++| .+. ........+.+|++++++++|+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999987542 2222222 111 11123456789999999999999
Q ss_pred eeeeecccccCCcEEEEEecCCCCCHHHHHhhcC---CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE
Q 002178 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL 758 (956)
Q Consensus 682 Iv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl 758 (956)
|+++++++...+..++|+|++ .++|.+++.... ...........|+.||+.||+|||+++ ||||||||+|||+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 999999999999999999999 568888775432 112335567789999999999999998 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCC-CCc-
Q 002178 759 DHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS-HGK- 836 (956)
Q Consensus 759 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~-~~~- 836 (956)
+.++.+||+|||+++.+.... ........||..|+|||++.+..++.++|||||||++|||++|..++. ...
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~ 374 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKER------EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGG 374 (501)
T ss_pred CCCCCEEEEeCCCceecCccc------ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCC
Confidence 999999999999998764321 111223568999999999999999999999999999999999876443 221
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC-CHHHHHHHHHHhHhhCCCCCCCCcccccc
Q 002178 837 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP-SMSEVMRELESIWNMMPESDTKTPEFINS 915 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~~~~~~~~~~~ll~~ 915 (956)
....+........ ..... .+|+. ...+.+.+.. ......+ .....+..+ .......+++.+
T Consensus 375 ~~~~~~~~~~~~~---~~~~~---~~p~~-~~~~~~~i~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~li~k 436 (501)
T PHA03210 375 KPGKQLLKIIDSL---SVCDE---EFPDP-PCKLFDYIDS---AEIDHAGHSVPPLIRNL--------GLPADFEYPLVK 436 (501)
T ss_pred CHHHHHHHHHHhc---ccChh---hcCCc-HHHHHHHhhh---hhcccCccchhhHHHhc--------CCChHHHHHHHH
Confidence 2222221111100 00111 11211 1112222111 1111111 222222111 123345678999
Q ss_pred ccCCCCCCCCCCccCCCCCccccCCC
Q 002178 916 EHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 916 ~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
||++||++|||++|+|+||||+....
T Consensus 437 mL~~DP~~Rpsa~elL~hp~f~~~~~ 462 (501)
T PHA03210 437 MLTFDWHLRPGAAELLALPLFSAEEE 462 (501)
T ss_pred HhccCcccCcCHHHHhhChhhhcCCc
Confidence 99999999999999999999987554
No 229
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3e-35 Score=323.42 Aligned_cols=281 Identities=25% Similarity=0.356 Sum_probs=206.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccC--CcEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLV 698 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV 698 (956)
++|++.+.||+|+||.||+|..+ +++.||+|.++..... ....+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888999999999999999976 5899999998753322 234567899999999999999999998776 899999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||++ ++|.+++.... ..+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++......
T Consensus 85 ~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 159 (293)
T cd07843 85 MEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSP 159 (293)
T ss_pred ehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence 99996 59999887643 36899999999999999999999999 999999999999999999999999999865432
Q ss_pred CCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
. .......++..|+|||.+.+. .++.++||||||+++|||++|+.||........ ..... .
T Consensus 160 ~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~-~~~~~----------~ 221 (293)
T cd07843 160 L-------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQ-LNKIF----------K 221 (293)
T ss_pred c-------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHH----------H
Confidence 1 111234577899999998764 468899999999999999999999975443221 11110 0
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCC--CCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPES--DTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~--~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
..+...+..+..+..+...- .....++.... +...++.. .+...+++++|+..||++|||++|+|+|||
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 222 LLGTPTEKIWPGFSELPGAK--KKTFTKYPYNQ-------LRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HhCCCchHHHHHhhccchhc--ccccccccchh-------hhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 11111122222221111000 00001111111 12223332 455678999999999999999999999999
Q ss_pred c
Q 002178 936 V 936 (956)
Q Consensus 936 f 936 (956)
|
T Consensus 293 f 293 (293)
T cd07843 293 F 293 (293)
T ss_pred C
Confidence 8
No 230
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=5e-35 Score=325.38 Aligned_cols=267 Identities=22% Similarity=0.307 Sum_probs=206.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|+..+.||+|++|+||+|... +++.||+|.+...... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 46888999999999999999975 5899999998754332 3457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++.......+++..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 9999999999998665567899999999999999999999998 9999999999999999999999999987653221
Q ss_pred CCCcc----------------------ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCch
Q 002178 780 IEGIV----------------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 780 ~~~~~----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~ 837 (956)
..... .........|+..|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 10000 00011234578899999999998899999999999999999999999964432
Q ss_pred hHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCcccccccc
Q 002178 838 IVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEH 917 (956)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L 917 (956)
...... +..... ..|... .......+++.+|+
T Consensus 238 ~~~~~~----------~~~~~~------------------------~~~~~~--------------~~~~~~~~li~~~l 269 (316)
T cd05574 238 DETFSN----------ILKKEV------------------------TFPGSP--------------PVSSSARDLIRKLL 269 (316)
T ss_pred HHHHHH----------HhcCCc------------------------cCCCcc--------------ccCHHHHHHHHHHc
Confidence 111100 000000 000000 01122346777788
Q ss_pred CCCCCCCCC----CccCCCCCccccCCC
Q 002178 918 TSKEETPPS----SSSMLKHPYVSSDVS 941 (956)
Q Consensus 918 ~~dP~~R~s----a~e~L~HP~f~~~~~ 941 (956)
..||++|+| ++|+|+||||++-..
T Consensus 270 ~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 270 VKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred cCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 888888888 999999999987544
No 231
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.2e-34 Score=314.25 Aligned_cols=258 Identities=28% Similarity=0.459 Sum_probs=206.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-C---CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-D---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
..+|++.+.||+|+||.||+|... + +..+|+|.++... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 82 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMI 82 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 357888999999999999999863 2 3479999887543 2335678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++++|.+++.... ..+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.++++|||++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 83 VTEYMENGSLDAFLRKHD-GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 999999999999997653 35788999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.... ........++..|+|||++.+..++.++|||||||++||+++ |+.||....... .... +.+
T Consensus 159 ~~~~----~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~-~~~~---------~~~ 224 (267)
T cd05066 159 DPEA----AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD-VIKA---------IEE 224 (267)
T ss_pred ccce----eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH-HHHH---------HhC
Confidence 2210 011112223568999999998899999999999999999887 999996543211 1111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+...+.+..++..+.+++.+|++.+|.+||++.++++.|+++
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 225 GYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 111223345667889999999999999999999999998764
No 232
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.8e-35 Score=322.34 Aligned_cols=261 Identities=23% Similarity=0.362 Sum_probs=203.8
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 333467999999999999864 6899999998765555566789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
++|.+++... .+++..+..++.||+.||+|||+++ |+||||||+||++++++.+||+|||++.......
T Consensus 104 ~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~----- 172 (292)
T cd06658 104 GALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV----- 172 (292)
T ss_pred CcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc-----
Confidence 9999988542 4788999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||........ ..
T Consensus 173 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~--------------------- 228 (292)
T cd06658 173 --PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MR--------------------- 228 (292)
T ss_pred --ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH---------------------
Confidence 111234588999999999888899999999999999999999999864332110 00
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCCCCc
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGSN 944 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~~~ 944 (956)
.+............. ......+++.+|+..||++|||++|+++||||......+-
T Consensus 229 --------~~~~~~~~~~~~~~~-----------------~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~ 283 (292)
T cd06658 229 --------RIRDNLPPRVKDSHK-----------------VSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSC 283 (292)
T ss_pred --------HHHhcCCCccccccc-----------------cCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence 001111000000000 0111235777788899999999999999999987776654
Q ss_pred cc
Q 002178 945 LV 946 (956)
Q Consensus 945 ~~ 946 (956)
.+
T Consensus 284 ~~ 285 (292)
T cd06658 284 IV 285 (292)
T ss_pred cc
Confidence 33
No 233
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.7e-34 Score=317.93 Aligned_cols=262 Identities=29% Similarity=0.443 Sum_probs=206.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC-----------------CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceee
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD-----------------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 684 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 684 (956)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4678999999999999999988542 2468999987543 334568899999999999999999
Q ss_pred eecccccCCcEEEEEecCCCCCHHHHHhhcC---------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCccc
Q 002178 685 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKS---------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 755 (956)
Q Consensus 685 l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~---------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 755 (956)
+++++..++..++||||+++++|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999999999999999999999999997643 125889999999999999999999998 9999999999
Q ss_pred EEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCC
Q 002178 756 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 833 (956)
Q Consensus 756 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt--g~~pf~ 833 (956)
|+++.++.++|+|||+++.....+. ........++..|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~ 235 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY-----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYE 235 (296)
T ss_pred eeecCCCceEEccccceeecccCcc-----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCC
Confidence 9999999999999999876533221 111223446778999999998889999999999999999998 667776
Q ss_pred CCchhHHHHHHHhhcccchhhcc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 834 HGKNIVREVNIAYQSSMMFSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
....... ...... ...... ......+..++.++.+++.+|++.+|.+||++.++++.|+
T Consensus 236 ~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 236 HLTDQQV-IENAGH---FFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CcChHHH-HHHHHh---ccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 4332211 111100 000000 0111223445678999999999999999999999998875
No 234
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.3e-34 Score=314.55 Aligned_cols=203 Identities=31% Similarity=0.465 Sum_probs=172.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccC------C
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE------G 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~------~ 693 (956)
+++.|++.+.||+|+||.||+|... +++.||+|.+.... .....+.+|+.+++++ +|+||+++++++... .
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD 82 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence 5678899999999999999999965 68899999987543 3345788999999998 699999999998642 4
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+++++|.+++.......+++..+..++.|++.||+|||+++ |+||||||+||++++++.+||+|||++.
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~ 159 (272)
T cd06637 83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA 159 (272)
T ss_pred EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCce
Confidence 6899999999999999998755567899999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
...... .......|+..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 160 QLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred eccccc-------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 653211 1123456889999999986 345788999999999999999999999643
No 235
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.2e-37 Score=303.63 Aligned_cols=295 Identities=23% Similarity=0.331 Sum_probs=213.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccccc--------C
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--------E 692 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--------~ 692 (956)
..|+...+||+|.||.||+|+.+ +|+.||+|+.--+. ..-.....+|++++..++|+|++.++..|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 34566778999999999999965 58889998653221 1123467889999999999999999998843 2
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
...++||++|+. +|.-++... ...++..++.++++++..||.|+|... |+|||+|++|+|++.+|.+||+|||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~-~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNR-KVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCc-cccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence 358999999965 888888543 346888999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
+.+...+.. .....+....|..|++||.+.+ ..|+++.|||.-||++.||.||.+.++...+. ++...
T Consensus 172 r~fs~~~n~---~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq-qql~~------- 240 (376)
T KOG0669|consen 172 RAFSTSKNV---VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ-QQLHL------- 240 (376)
T ss_pred cceeccccc---CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH-HHHHH-------
Confidence 877654422 1223455667999999999987 56999999999999999999997777654432 22221
Q ss_pred hhhccCCCCCCChHHHHHHHHHHH-HhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccC
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLAL-KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 930 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~-~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~ 930 (956)
+....+.+..+.++.+.++-. .-++..|--.-+...| +...+.+ ..++.+.|++.+||++||.+|+.++++
T Consensus 241 ---Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv----~n~~kp~-~kd~~a~dLle~ll~~DP~kR~~ad~a 312 (376)
T KOG0669|consen 241 ---ISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKV----KNRLKPY-VKDDEALDLLEKLLKLDPTKRIDADQA 312 (376)
T ss_pred ---HHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhh----hhhcccc-cCChhHHHHHHHHhccCcccCcchHhh
Confidence 122223333333322222111 0111111111122222 2222211 236778999999999999999999999
Q ss_pred CCCCccccCCCC
Q 002178 931 LKHPYVSSDVSG 942 (956)
Q Consensus 931 L~HP~f~~~~~~ 942 (956)
|+|.||..|.-.
T Consensus 313 lnh~~F~kdp~p 324 (376)
T KOG0669|consen 313 LNHDFFWKDPMP 324 (376)
T ss_pred hchhhhhcCCcc
Confidence 999999877664
No 236
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.5e-34 Score=311.26 Aligned_cols=201 Identities=27% Similarity=0.423 Sum_probs=175.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|+||.||++... +++.||+|.+... .....+++.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5888999999999999999964 6899999988643 233346789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..++.++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 155 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-- 155 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch--
Confidence 99999999997755556889999999999999999999998 9999999999999999999999999997654321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......|+..|+|||+..+..++.++|||||||+++||++|+.||...
T Consensus 156 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~ 204 (256)
T cd08218 156 -----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG 204 (256)
T ss_pred -----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC
Confidence 1122345788999999999888999999999999999999999998654
No 237
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.5e-34 Score=310.56 Aligned_cols=253 Identities=31% Similarity=0.500 Sum_probs=196.6
Q ss_pred CeeeeeCCeEEEEEEeC----CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccc-cCCcEEEEEecCC
Q 002178 630 TQIGQGGYGKVYKGILP----DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD-EEGEQMLVYEFMS 703 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~-~~~~~~LV~e~~~ 703 (956)
+.||+|+||.||+|.+. ++..||+|.+... .....+.+.+|+.+++.++||||+++++++. .++..++||||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2467999988643 2334567889999999999999999999764 4567899999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|+|.+++.... ....+..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~-- 154 (262)
T cd05058 81 HGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY-- 154 (262)
T ss_pred CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcce--
Confidence 999999997643 23567778899999999999999998 999999999999999999999999999754322110
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCC-CCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQ-PISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~-pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.........++..|+|||.+.+..++.++|||||||++|||++|.. ||... +....... +..+.....
T Consensus 155 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~ 223 (262)
T cd05058 155 -SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-DSFDITVY---------LLQGRRLLQ 223 (262)
T ss_pred -eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-CHHHHHHH---------HhcCCCCCC
Confidence 0011123345678999999998899999999999999999999654 55432 22222111 112222233
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
+...+..+.+++..||+.+|++||++.++++.++++.
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 4455678999999999999999999999999998765
No 238
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.9e-34 Score=313.12 Aligned_cols=257 Identities=27% Similarity=0.430 Sum_probs=208.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC----CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
.++|.+.+.||+|+||.||+|.+.+ ...||+|...... ....+.+.+|+.++++++|+||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 4568888999999999999998643 3578999887654 3445688999999999999999999999875 46789
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 84 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 84 VMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999999999997643 35899999999999999999999998 99999999999999999999999999976543
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
... .......++..|+|||.+....++.++||||||+++||+++ |+.||........... +..
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~----------~~~ 223 (270)
T cd05056 160 ESY------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR----------IEN 223 (270)
T ss_pred ccc------eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----------HHc
Confidence 211 11112234568999999988889999999999999999996 9999976543221111 111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+.....+..++..+.+++.+|+..+|.+||++.++++.|+.+.+
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 224 GERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 22223455667889999999999999999999999999998754
No 239
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=2.5e-34 Score=309.70 Aligned_cols=250 Identities=27% Similarity=0.420 Sum_probs=203.6
Q ss_pred CeeeeeCCeEEEEEEeCC--C--cEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILPD--G--TVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++|+||+++++++.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999643 3 3699999987665 556789999999999999999999999988 889999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
++|.+++.......+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 153 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--- 153 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---
Confidence 99999997754356899999999999999999999998 999999999999999999999999999876432211
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ....... .......+
T Consensus 154 -~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~-~~~~~~~--------~~~~~~~~ 223 (257)
T cd05040 154 -YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ-ILKKIDK--------EGERLERP 223 (257)
T ss_pred -eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHh--------cCCcCCCC
Confidence 111123456789999999999899999999999999999998 999996543321 1111110 11112234
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 864 SECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 224 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 224 EACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred ccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 456678999999999999999999999998764
No 240
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3e-34 Score=311.23 Aligned_cols=205 Identities=27% Similarity=0.400 Sum_probs=174.0
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
++.+++++.....||+|+||.||+|... +++.||+|.+........+.+.+|++++++++|+||+++++++..++..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3455667777789999999999999954 688999999887666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCc--hhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccc
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPL--GFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRL 774 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~ 774 (956)
|+||+++++|.+++.... ..+ ++..+..++.||+.||+|||+.+ |+||||||+||+++. ++.++|+|||.+..
T Consensus 83 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~ 158 (268)
T cd06624 83 FMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR 158 (268)
T ss_pred EEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence 999999999999997642 234 78888899999999999999998 999999999999976 67999999999876
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
..... .......|+..|+|||++.+.. ++.++||||||+++|||++|+.||..
T Consensus 159 ~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 159 LAGIN-------PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cccCC-------CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 53211 1112235788999999986643 78899999999999999999999864
No 241
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.9e-34 Score=317.54 Aligned_cols=263 Identities=27% Similarity=0.412 Sum_probs=203.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-----------------CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceee
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-----------------DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVS 684 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~ 684 (956)
.++|++.+.||+|+||.||++... ++..||+|.+.... .....++.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 457999999999999999998532 24579999987543 334568899999999999999999
Q ss_pred eecccccCCcEEEEEecCCCCCHHHHHhhcCC---------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCccc
Q 002178 685 LVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK---------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASN 755 (956)
Q Consensus 685 l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~N 755 (956)
+++++...+..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 99999999999999999999999999976421 23677889999999999999999999 9999999999
Q ss_pred EEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh--CCCCCC
Q 002178 756 ILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT--GMQPIS 833 (956)
Q Consensus 756 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt--g~~pf~ 833 (956)
|+++.++.++|+|||+++....... ........++..|+|||...++.++.++|||||||++|||++ |..||.
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~ 235 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDY-----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYS 235 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcc-----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCcc
Confidence 9999999999999999976532211 011122334678999999988889999999999999999998 677886
Q ss_pred CCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 834 HGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
..... +....... .............+..++..+.+++.+||+.+|.+||++.++.+.|+
T Consensus 236 ~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 236 QLSDE-QVIENTGE--FFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ccChH-HHHHHHHH--HHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 43321 11111000 00000001111223456688999999999999999999999998875
No 242
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=304.59 Aligned_cols=248 Identities=26% Similarity=0.443 Sum_probs=210.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
+-|.+.++||+|+||+||||.++ .|++||+|.+... ...+++..|+.+|++...+++|++||.|......++|||||
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYC 110 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYC 110 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhc
Confidence 34667889999999999999976 6999999988743 34568899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
.-|++.+.++.+ +.++++.++..+.++.++||+|||... -||||||+.|||++-+|.+||+|||.|-.+...
T Consensus 111 GAGSiSDI~R~R-~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT---- 182 (502)
T KOG0574|consen 111 GAGSISDIMRAR-RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT---- 182 (502)
T ss_pred CCCcHHHHHHHh-cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh----
Confidence 999999999765 457999999999999999999999988 799999999999999999999999999765321
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
......+.||+.|||||++..-.|+.++||||+|+...||..|++||.+-..+. .++.+-....+.+
T Consensus 183 ---MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR----------AIFMIPT~PPPTF 249 (502)
T KOG0574|consen 183 ---MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR----------AIFMIPTKPPPTF 249 (502)
T ss_pred ---HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc----------eeEeccCCCCCCC
Confidence 233466789999999999999999999999999999999999999997644321 1222222223333
Q ss_pred --ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 863 --PSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 863 --~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
|++++.++.++++.|+-+.|++|-++.++++.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 78899999999999999999999988777653
No 243
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2e-34 Score=310.14 Aligned_cols=249 Identities=26% Similarity=0.398 Sum_probs=201.1
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|+..+.||+|+||.||.++. .+++.+++|.+.... ....+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 588899999999999999985 468999999876432 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.......+++..+..++.|+++||.|||+.+ ++||||||+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99999999998765566899999999999999999999998 99999999999999999999999999986543221
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
......+++.|+|||...+..++.++||||||+++|||++|..||..... .+... .+..+.+..
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-~~~~~---------~~~~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-LNLVV---------KIVQGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-HHHHH---------HHHcCCCCC
Confidence 12334588999999999988889999999999999999999999865332 11111 111222223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.+...+..+.+++.+|++.+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~ 252 (256)
T cd08221 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLD 252 (256)
T ss_pred CccccCHHHHHHHHHHcccCcccCCCHHHHhh
Confidence 33445566777777777777777777776664
No 244
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.9e-34 Score=315.67 Aligned_cols=267 Identities=25% Similarity=0.422 Sum_probs=205.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-----CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC--CcE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-----PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 695 (956)
..|++.+.||+|+||.||++.. .++..||+|.++... ......+.+|++++++++|+||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 4578899999999999999974 257899999987543 33346789999999999999999999998765 568
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 99999999999999996543 35899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhH-HHHH---HHhh-ccc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIV-REVN---IAYQ-SSM 850 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~-~~~~---~~~~-~~~ 850 (956)
...... ........++..|+|||++.+..++.++|||||||++|||++++.|........ +... .... ...
T Consensus 160 ~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05079 160 ETDKEY----YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRL 235 (284)
T ss_pred ccCccc----eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHH
Confidence 432210 111223456778999999998889999999999999999999877653221100 0000 0000 000
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
...+..+...+.+..++..+.+++.+|++.+|++||++.++++.++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 236 VRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 001111222233455778999999999999999999999999998865
No 245
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.5e-34 Score=309.76 Aligned_cols=249 Identities=29% Similarity=0.483 Sum_probs=200.4
Q ss_pred CeeeeeCCeEEEEEEeCC----CcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
++||+|+||.||+|.+.. +..||+|.+..... ...+++.+|+++++++.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999998532 26899999886544 34568899999999999999999999876 4568999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|+|.+++.... .+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 80 GPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred CcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---
Confidence 99999997654 5889999999999999999999998 999999999999999999999999999865432210
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||...... +.... .. .......+
T Consensus 152 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~-~~~~~-~~--------~~~~~~~~ 220 (257)
T cd05060 152 -YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA-EVIAM-LE--------SGERLPRP 220 (257)
T ss_pred -cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH-HHHHH-HH--------cCCcCCCC
Confidence 011112224568999999998899999999999999999998 99998654331 11111 11 11122345
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 864 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
..++..+.+++.+|++.+|.+||++.++.+.|+++
T Consensus 221 ~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 221 EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 56678899999999999999999999999999875
No 246
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.8e-34 Score=313.92 Aligned_cols=200 Identities=27% Similarity=0.415 Sum_probs=172.0
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
-|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|+||+++++++..++..++||||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3677788999999999999975 578899999876665566788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++... ..++++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 86 ~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 86 GGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99999988653 346899999999999999999999998 9999999999999999999999999987543211
Q ss_pred cccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......++..|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~ 211 (282)
T cd06643 158 ---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHEL 211 (282)
T ss_pred ---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCcccc
Confidence 1123345889999999984 345778999999999999999999998643
No 247
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.9e-34 Score=314.73 Aligned_cols=257 Identities=27% Similarity=0.443 Sum_probs=204.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCc----EEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
.++|++.++||+|+||+||+|.+. +++ .||+|.++... ....+.+.+|+.+++.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 467888999999999999999853 444 48999987543 33456788999999999999999999998754 578
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
++|||+++|+|.++++... ..+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++...
T Consensus 85 l~~~~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-DRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 9999999999999997543 35889999999999999999999998 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........++..|+|||...+..++.++|||||||++|||++ |..||....... ......
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~-------- 225 (279)
T cd05109 161 IDET-----EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPARE--IPDLLE-------- 225 (279)
T ss_pred cccc-----eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHH--------
Confidence 3211 011112234678999999999999999999999999999998 888886433211 111111
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
.+.....+..++..+.+++.+||+.+|++||++.++++.++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 226 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA 269 (279)
T ss_pred CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 11122334456778899999999999999999999999887664
No 248
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.8e-34 Score=309.76 Aligned_cols=205 Identities=28% Similarity=0.506 Sum_probs=174.0
Q ss_pred CCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCC------hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS------LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+|.+.+.||+|+||+||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999998889999999876432 11234688899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.+.. ++++..+..++.|++.||+|||+.+ |+|+||||+||++++++.++|+|||.+......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999996543 4788999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
..... .........|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 156 ~~~~~-~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 156 GLHGT-HSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred ccccc-ccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccC
Confidence 11110 111123346889999999999988999999999999999999999999654
No 249
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2.7e-34 Score=309.35 Aligned_cols=201 Identities=26% Similarity=0.404 Sum_probs=172.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccccc-CCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~~~~LV~e 700 (956)
+|++.+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++|+|++++++.+.. +...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999965 57899999986432 2334578899999999999999999998764 446789999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++.......+++.+++.++.|++.|++|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~- 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC- 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC-
Confidence 999999999998755566899999999999999999999999 9999999999999999999999999997653221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......+++.|+|||++.+..++.++||||||++++||++|+.||...
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 205 (257)
T cd08223 157 ------DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAK 205 (257)
T ss_pred ------CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 1123345788999999999999999999999999999999999998643
No 250
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.3e-34 Score=312.49 Aligned_cols=249 Identities=30% Similarity=0.489 Sum_probs=198.0
Q ss_pred CeeeeeCCeEEEEEEeC-CCc--EEEEEEecCCC-hhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGT--VVAVKRAQEGS-LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|.+. ++. .+|+|.++... ....+.+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 343 57888887533 33456788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhcC--------------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002178 705 GTLRDQLSAKS--------------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 705 gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
|+|.+++.... ...+++..+++++.|++.||+|||+.+ ++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999997532 124788999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~ 849 (956)
++...... ........+..|+|||++....++.++|||||||++|||++ |..||..... .+....
T Consensus 158 l~~~~~~~--------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-~~~~~~----- 223 (270)
T cd05047 158 LSRGQEVY--------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-AELYEK----- 223 (270)
T ss_pred Cccccchh--------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-HHHHHH-----
Confidence 98632210 00111223567999999988889999999999999999997 9999864332 111111
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
+..+.....+..++..+.+++.+||..+|.+||++.++++.|+++.
T Consensus 224 ----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 ----LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ----HhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1111112234445678899999999999999999999999998764
No 251
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.8e-34 Score=313.07 Aligned_cols=259 Identities=28% Similarity=0.470 Sum_probs=205.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CC---cEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DG---TVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..|++.+.||+|+||.||+|... ++ ..||+|.+... .....++|..|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 34778899999999999999964 33 36999998754 233456899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 84 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQND-GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccC
Confidence 99999999999997643 35889999999999999999999998 999999999999999999999999998765432
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDG 857 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 857 (956)
..... .........+..|+|||.+.+..++.++|||||||++||+++ |..||...... +..... ...
T Consensus 160 ~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~-~~~~~i---------~~~ 227 (269)
T cd05065 160 TSDPT--YTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ-DVINAI---------EQD 227 (269)
T ss_pred ccccc--cccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH-HHHHHH---------HcC
Confidence 21100 000011112457999999999999999999999999999887 99999754322 111111 011
Q ss_pred CCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 858 NMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 858 ~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
...+.+.+++..+.+++.+||+.+|.+||++.+++..|+++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11223456677889999999999999999999999988754
No 252
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.3e-34 Score=310.18 Aligned_cols=253 Identities=27% Similarity=0.350 Sum_probs=192.5
Q ss_pred CeeeeeCCeEEEEEEeCC---CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 630 TQIGQGGYGKVYKGILPD---GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
+.||+|+||.||+|.+.+ +..+|+|.++... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 4679999887543 233457889999999999999999999999989999999999999
Q ss_pred CHHHHHhhcC---CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 706 TLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 706 sL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
+|.++++... ....++..+..++.|++.|++|||+.+ ++||||||+||+++.++++||+|||.++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 9999997532 224567788899999999999999999 99999999999999999999999999875432211
Q ss_pred ccccceecccccCCCcccccccccC-------CCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
........++..|+|||++.+. .++.++||||||+++|||++ |+.||........... ...... ...
T Consensus 156 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~-~~~ 230 (269)
T cd05087 156 ---YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTY-TVREQQ-LKL 230 (269)
T ss_pred ---eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHH-Hhhccc-CCC
Confidence 1111234567889999998642 35789999999999999996 9999975443221111 111000 001
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
. .+......+..+.+++..|| .+|++||+++++++.|+
T Consensus 231 ~---~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 P---KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred C---CCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 11112234567888999999 57999999999998764
No 253
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.8e-34 Score=316.71 Aligned_cols=198 Identities=27% Similarity=0.440 Sum_probs=174.4
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||++... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999965 68999999986532 223457889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 999999999999765 35889999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.....+++.|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 202 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN 202 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence 223458899999999988888999999999999999999999996544
No 254
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=3e-34 Score=309.31 Aligned_cols=248 Identities=35% Similarity=0.546 Sum_probs=206.3
Q ss_pred CeeeeeCCeEEEEEEeCC----CcEEEEEEecCCChhh-HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|.... +..||+|.+....... .+.+.+|++.++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999653 7899999988654433 56889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcC-------CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 705 GTLRDQLSAKS-------KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 705 gsL~~~l~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
++|.+++.... ...+++..++.++.|+++||+|||+++ ++||||||+||++++++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 99999997642 356899999999999999999999998 99999999999999999999999999987653
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
... ........++..|+|||.+....++.++||||+|+++|||++ |..||..... .+... .+..
T Consensus 158 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-~~~~~---------~~~~ 222 (262)
T cd00192 158 DDY-----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-EEVLE---------YLRK 222 (262)
T ss_pred ccc-----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-HHHHH---------HHHc
Confidence 321 112233457889999999998889999999999999999999 6899876532 11111 1112
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
+.....+..++.++.+++.+|++.+|.+||++.++++.|
T Consensus 223 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 223 GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 233345666788999999999999999999999998876
No 255
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.2e-35 Score=324.16 Aligned_cols=286 Identities=25% Similarity=0.344 Sum_probs=206.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccC--CcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~L 697 (956)
.++|++.+.||+|+||.||+|... +|+.||+|.+...... ....+.+|++++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467899999999999999999965 6899999998743322 123567899999999999999999998654 56899
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||||++ ++|.+++.... ..+++..+..++.|+++||+|||+.+ ++||||||+||++++++.+||+|||++.....
T Consensus 86 v~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999995 58998886542 46899999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||........ ......
T Consensus 161 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~-~~~~~~--------- 223 (309)
T cd07845 161 PA-------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQ-LDLIIQ--------- 223 (309)
T ss_pred cc-------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH---------
Confidence 21 11122345778999999876 5578999999999999999999999975543222 111110
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+......+..+..+........+... .. .+...++...+...+++.+||.+||++|+|++|+++||||
T Consensus 224 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 224 -LLGTPNESIWPGFSDLPLVGKFTLPKQP--YN-------NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred -hcCCCChhhchhhhcccccccccccCCC--CC-------chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 0111111111111111110000001000 00 0111122234556789999999999999999999999999
Q ss_pred ccCC
Q 002178 937 SSDV 940 (956)
Q Consensus 937 ~~~~ 940 (956)
....
T Consensus 294 ~~~~ 297 (309)
T cd07845 294 KEKP 297 (309)
T ss_pred ccCC
Confidence 7443
No 256
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.6e-34 Score=310.57 Aligned_cols=239 Identities=21% Similarity=0.377 Sum_probs=189.3
Q ss_pred CeeeeeCCeEEEEEEeCC-------------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 630 TQIGQGGYGKVYKGILPD-------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
+.||+|+||.||+|...+ ...|++|.+..........+.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2358899877655555567888999999999999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc-------EEEEee
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT-------AKVADF 769 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~-------~kl~Df 769 (956)
+||||+++|+|..+++.+. ..+++..++.++.||++||+|||+.+ |+||||||+|||++.++. +|++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKS-DVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 9999999999999886543 35889999999999999999999998 999999999999987664 899999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccc-cCCCCCcccchhHHHHHHHHH-hCCCCCCCCchhHHHHHHHhh
Q 002178 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-THKLTDKSDVYSLGVVFLELL-TGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDVwS~G~ll~ell-tg~~pf~~~~~~~~~~~~~~~ 847 (956)
|++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.||..... .+.... .
T Consensus 157 g~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-~~~~~~-~- 222 (262)
T cd05077 157 GIPITVLSR-----------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL-AEKERF-Y- 222 (262)
T ss_pred CCCccccCc-----------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch-hHHHHH-H-
Confidence 998654211 2234778999999987 467899999999999999998 57777754321 111110 0
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 848 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
.+.. .........+.+++.+||+.+|.+||++.++++.+
T Consensus 223 --------~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 223 --------EGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred --------hcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0011 11122346788999999999999999999998765
No 257
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.6e-34 Score=316.03 Aligned_cols=278 Identities=26% Similarity=0.402 Sum_probs=205.9
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
|++.+.||.|++|.||+|... +|+.||+|++..... ...+.+.+|++++++++|+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 677889999999999999965 799999999875432 22357888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
+++|.+++.......+++..++.++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~--- 153 (283)
T cd07835 81 -DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV--- 153 (283)
T ss_pred -CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc---
Confidence 579999997765556899999999999999999999998 9999999999999999999999999997653221
Q ss_pred ccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||............ .. . ...
T Consensus 154 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~~---------~-~~~ 218 (283)
T cd07835 154 ----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI-FR---------T-LGT 218 (283)
T ss_pred ----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HH---------H-hCC
Confidence 111223467899999988764 5788999999999999999999999765443222111 00 0 011
Q ss_pred CChHHHHHHHHHHHHhcccCCCC-CCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 862 YPSECVEKFIKLALKCCQDETDA-RPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~-RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
...........+.... ..-+.. .+... ...+.......+++.+|+..||++|||++|+++||||
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 219 PDEDVWPGVTSLPDYK-PTFPKWARQDLS----------KVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChHHhhhhhhchhhh-hhcccccccchh----------hhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 1111111111110000 000100 11111 1122233445689999999999999999999999998
No 258
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.6e-34 Score=312.90 Aligned_cols=200 Identities=26% Similarity=0.427 Sum_probs=170.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46888999999999999999975 6899999988753 223346788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-CCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 702 MSNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
+++++|.+++.... ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||.+......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 99999999986532 23689999999999999999999974 6 999999999999999999999999998765321
Q ss_pred CCCccccceecccccCCCcccccccccCC------CCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHK------LTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~------~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......++..|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 210 (286)
T cd06622 157 --------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE 210 (286)
T ss_pred --------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence 112335788999999986543 478999999999999999999999643
No 259
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=6.3e-34 Score=308.36 Aligned_cols=206 Identities=27% Similarity=0.479 Sum_probs=173.2
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---------hHHHHHHHHHHHHhcCCCceeeeecccccCCc
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~ 694 (956)
+|.+...||+|++|.||+|... +++.||+|.+...... ..+.+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 4777889999999999999864 6889999988643221 12467889999999999999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||++++++.+||+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 99999999999999999764 35788899999999999999999998 99999999999999999999999999987
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
......... .........|+..|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 156 ~~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 216 (267)
T cd06628 156 LEANSLSTK-TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCT 216 (267)
T ss_pred cccccccCC-ccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCcc
Confidence 642211100 0111223457889999999998889999999999999999999999997543
No 260
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-34 Score=318.48 Aligned_cols=281 Identities=24% Similarity=0.367 Sum_probs=204.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcC-CCceeeeecccccCCc-----
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGE----- 694 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~----- 694 (956)
++|++.+.||+|+||.||+|... +++.||+|.+...... ....+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 47889999999999999999965 6899999987653222 2357888999999995 6999999999876655
Q ss_pred EEEEEecCCCCCHHHHHhhcC---CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeec
Q 002178 695 QMLVYEFMSNGTLRDQLSAKS---KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFG 770 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfG 770 (956)
.++||||+++ +|.+++.... ...+++..++.++.||++||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 8999886532 246899999999999999999999998 999999999999998 8999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSS 849 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~ 849 (956)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||............ +.
T Consensus 157 ~~~~~~~~~-------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~-~~-- 226 (295)
T cd07837 157 LGRAFSIPV-------KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHI-FK-- 226 (295)
T ss_pred cceecCCCc-------cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HH--
Confidence 987653221 11122346788999998865 45789999999999999999999999765443322211 10
Q ss_pred cchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 850 MMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
.+ ...+.........+.... ..|..+|. ......+.......+||.+||..||++|++++|
T Consensus 227 ----~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~e 287 (295)
T cd07837 227 ----LL----GTPTEQVWPGVSKLRDWH--EFPQWKPQ---------DLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKA 287 (295)
T ss_pred ----Hh----CCCChhhCcchhhccchh--hcCcccch---------hHHHhccccCHHHHHHHHHHccCChhhcCCHHH
Confidence 00 000111111111110000 00111111 011122344555678999999999999999999
Q ss_pred CCCCCccc
Q 002178 930 MLKHPYVS 937 (956)
Q Consensus 930 ~L~HP~f~ 937 (956)
++.||||.
T Consensus 288 il~~~~~~ 295 (295)
T cd07837 288 ALTHPYFD 295 (295)
T ss_pred HhcCCCcC
Confidence 99999984
No 261
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.9e-34 Score=308.94 Aligned_cols=251 Identities=31% Similarity=0.515 Sum_probs=203.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
.+|++.+.||+|+||.||+|.+.+++.+|+|.+..... ....+.+|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46778899999999999999987788999998875433 34578999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++.... ..+++..++.++.|++.|++|||+.+ ++||||||+||+++.++.+||+|||.++......
T Consensus 83 ~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---- 154 (256)
T cd05112 83 HGCLSDYLRAQR-GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ---- 154 (256)
T ss_pred CCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCc----
Confidence 999999997543 35788999999999999999999998 9999999999999999999999999987653221
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
........++.+|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ..+.....
T Consensus 155 --~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-~~~~~~~---------~~~~~~~~ 222 (256)
T cd05112 155 --YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-SEVVETI---------NAGFRLYK 222 (256)
T ss_pred --ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHH---------hCCCCCCC
Confidence 011122235678999999998889999999999999999998 8999865432 1111110 11111112
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
+...+..+.+++.+||+.+|++||++.++++.|
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 333567899999999999999999999999876
No 262
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=7.7e-34 Score=304.66 Aligned_cols=248 Identities=30% Similarity=0.484 Sum_probs=201.5
Q ss_pred CeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHH
Q 002178 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 708 (956)
++||+|+||.||+|...+++.||+|.+...... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 469999999999999877999999988764443 4568899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccce
Q 002178 709 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 788 (956)
Q Consensus 709 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 788 (956)
+++.... ..+++..+..++.+++.||+|||+++ ++||||||+||+++.++.+||+|||.+........ ...
T Consensus 81 ~~l~~~~-~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~~ 151 (251)
T cd05041 81 TFLRKKK-NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY-----TVS 151 (251)
T ss_pred HHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc-----eec
Confidence 9996643 35788999999999999999999998 99999999999999999999999999976532110 001
Q ss_pred ecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 002178 789 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 867 (956)
Q Consensus 789 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (956)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||........ ... +........+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~-~~~---------~~~~~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQT-RER---------IESGYRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHH-HHH---------HhcCCCCCCCccCC
Confidence 111223567999999998899999999999999999999 8888865432111 111 00111223455667
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 868 EKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 868 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
..+.+++.+|+..+|++||++.++++.|+
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 88999999999999999999999998875
No 263
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.4e-34 Score=313.16 Aligned_cols=206 Identities=30% Similarity=0.412 Sum_probs=176.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+......++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999964 68899999987533 23456889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
+++++|.++++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999976433 56899999999999999999999998 99999999999999999999999999877653321
Q ss_pred CCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
. .........|+..|+|||++... .++.++|||||||++|||++|+.||...
T Consensus 158 ~---~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~ 210 (267)
T cd06610 158 R---TRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210 (267)
T ss_pred c---cccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence 1 01122344688999999998876 7899999999999999999999999643
No 264
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.1e-34 Score=317.14 Aligned_cols=259 Identities=26% Similarity=0.413 Sum_probs=195.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHH-HHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|++.+.||+|+||.||+|... +|+.||+|+++... .....++..|+.. ++..+|+||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999975 69999999987543 2234456667664 666789999999999999999999999
Q ss_pred cCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 701 FMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 701 ~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|++ |+|.+++... ....+++..++.++.||+.||+|||++ + ++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 995 7998888652 235689999999999999999999987 6 99999999999999999999999999876532
Q ss_pred CCCCCccccceecccccCCCccccccccc----CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
. .......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||.......+....
T Consensus 157 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~--------- 219 (283)
T cd06617 157 S--------VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQ--------- 219 (283)
T ss_pred c--------cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHH---------
Confidence 1 11122457889999998865 45688999999999999999999998643221111110
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCC
Q 002178 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
...+.....+. .+ ......+++.+|+..+|++||+++++++|
T Consensus 220 ~~~~~~~~~~~-------------------~~-------------------~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 220 VVEEPSPQLPA-------------------EK-------------------FSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred HHhcCCCCCCc-------------------cc-------------------cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000000000 00 01122357777888888888899999999
Q ss_pred CccccCCC
Q 002178 934 PYVSSDVS 941 (956)
Q Consensus 934 P~f~~~~~ 941 (956)
|||.....
T Consensus 262 ~~~~~~~~ 269 (283)
T cd06617 262 PFFELHLS 269 (283)
T ss_pred chhhhccc
Confidence 99987764
No 265
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=8.3e-34 Score=311.88 Aligned_cols=202 Identities=26% Similarity=0.409 Sum_probs=174.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.+.|++.++||+|+||.||+|... +++.||+|.+........+.+.+|+++++.++|+||+++++++..++..++||||
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 367889999999999999999975 5899999999876666667889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|..++.+.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 91 ~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 163 (292)
T cd06644 91 CPGGAVDAIMLELD-RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT--- 163 (292)
T ss_pred CCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc---
Confidence 99999998876543 35889999999999999999999998 999999999999999999999999998653221
Q ss_pred CccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
........++..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 164 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 218 (292)
T cd06644 164 ----LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHEL 218 (292)
T ss_pred ----ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccc
Confidence 11122345788999999985 345678999999999999999999998643
No 266
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1e-34 Score=312.87 Aligned_cols=199 Identities=29% Similarity=0.407 Sum_probs=175.1
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5788999999999999999975 58999999987532 2345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++... .++++..+..++.|+++||.|||+.+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999764 46889999999999999999999998 9999999999999999999999999987654221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||....
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 203 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHS 203 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCC
Confidence 1233457889999999998889999999999999999999999997543
No 267
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.5e-34 Score=318.35 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=202.6
Q ss_pred CCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
...||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 447999999999999964 6899999998765445556788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... .
T Consensus 106 ~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-------~ 172 (297)
T cd06659 106 TDIVSQ---TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-------P 172 (297)
T ss_pred HHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc-------c
Confidence 998754 34789999999999999999999998 9999999999999999999999999987543221 1
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 867 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (956)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~-~~~----------------------- 228 (297)
T cd06659 173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQA-MKR----------------------- 228 (297)
T ss_pred cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-----------------------
Confidence 12234588999999999988899999999999999999999999974432111 000
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCCCCcccc
Q 002178 868 EKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSGSNLVS 947 (956)
Q Consensus 868 ~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~~~~~~ 947 (956)
+........... ........+++++|++.+|++||+++|+++||||......+.+++
T Consensus 229 ------~~~~~~~~~~~~-----------------~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~~~~~~ 285 (297)
T cd06659 229 ------LRDSPPPKLKNA-----------------HKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLPECLVP 285 (297)
T ss_pred ------HhccCCCCcccc-----------------CCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCcccccc
Confidence 000000000000 011122346778888888999999999999999877665555544
Q ss_pred c
Q 002178 948 G 948 (956)
Q Consensus 948 ~ 948 (956)
.
T Consensus 286 ~ 286 (297)
T cd06659 286 L 286 (297)
T ss_pred h
Confidence 3
No 268
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-34 Score=314.48 Aligned_cols=193 Identities=26% Similarity=0.417 Sum_probs=167.7
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||+|+||+||+|... +|+.||+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999865 689999998865322 2244667899999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++.......+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||.+...... .
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--------~ 149 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--------K 149 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC--------C
Confidence 99998765557899999999999999999999999 999999999999999999999999998765321 1
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 197 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQR 197 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCC
Confidence 112345778999999998888999999999999999999999999643
No 269
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.3e-35 Score=314.63 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=191.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecC--CChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~ 699 (956)
...|++.+.||+||.++||++...+.+.||+|++.. ...+....|.+|++.|.+++ |.+|+++++|-..++.+|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 456888999999999999999988888999887654 33444578999999999995 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||= ..+|..+|..+......| .++.+..|++.++.++|++| |||.||||.|.|+-+ |.+||+|||+|.......
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ecc-cccHHHHHHhccCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 976 679999998876655555 77889999999999999999 999999999999875 699999999998775432
Q ss_pred CCCccccceecccccCCCcccccccccCC-----------CCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHK-----------LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~ 848 (956)
..-.....+||+.||+||.+.... .+.++||||+|||||+|+.|+.||..-.+...
T Consensus 514 -----TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a-------- 580 (677)
T KOG0596|consen 514 -----TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA-------- 580 (677)
T ss_pred -----cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH--------
Confidence 122345568999999999996432 45689999999999999999999975333221
Q ss_pred ccchhhccCCC-CCCChHHH-HHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 849 SMMFSVIDGNM-GSYPSECV-EKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 849 ~~~~~~~~~~~-~~~~~~~~-~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.+..+.++.. .+||+.-. .++.++|+.|+..||.+||+..++++
T Consensus 581 -Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 581 -KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred -HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2223344322 12221100 11566666666655555555555543
No 270
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.6e-34 Score=319.01 Aligned_cols=276 Identities=26% Similarity=0.338 Sum_probs=206.9
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCC----
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG---- 693 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---- 693 (956)
...++|++.+.||+|+||.||+|..+ +|+.||+|.++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 589999999875332 22356778999999999999999999986544
Q ss_pred ------cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEE
Q 002178 694 ------EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 767 (956)
Q Consensus 694 ------~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 767 (956)
..++|+||+++ ++.+.+... ...+++..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeC
Confidence 78999999965 787777654 346899999999999999999999998 9999999999999999999999
Q ss_pred eeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002178 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 846 (956)
Q Consensus 768 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~ 846 (956)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......
T Consensus 159 dfg~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~------- 225 (302)
T cd07864 159 DFGLARLYNSEES------RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELA------- 225 (302)
T ss_pred cccccccccCCcc------cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-------
Confidence 9999986543221 11122345778999998865 457889999999999999999999986443211
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH---------HHHhHhhCCCCCCCCcccccccc
Q 002178 847 QSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE---------LESIWNMMPESDTKTPEFINSEH 917 (956)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~---------L~~~~~~~~~~~~~~~~ll~~~L 917 (956)
.+..+...|....+..+|.+.+.... ...+............+++.+|+
T Consensus 226 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 283 (302)
T cd07864 226 ----------------------QLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283 (302)
T ss_pred ----------------------HHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence 12222223333333333322211100 00111112223445578999999
Q ss_pred CCCCCCCCCCccCCCCCcc
Q 002178 918 TSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 918 ~~dP~~R~sa~e~L~HP~f 936 (956)
..||++||++++++.||||
T Consensus 284 ~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 284 TLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCChhhCCCHHHHhcCCCC
Confidence 9999999999999999997
No 271
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=6.6e-34 Score=310.46 Aligned_cols=258 Identities=27% Similarity=0.466 Sum_probs=207.3
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCc----EEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGT----VVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
..+|++.+.||+|+||+||+|.++ +|+ .||+|....... .....+.+|+.++++++|+||+++++++.. ...+
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence 356888899999999999999864 333 689998876543 345678899999999999999999999887 7899
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||+++|+|.+++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||.++...
T Consensus 85 ~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCccccccc
Confidence 9999999999999997643 34889999999999999999999988 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... ........++..|+|||.+....++.++|||||||++||+++ |+.||..... .+.... +.
T Consensus 161 ~~~~-----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-~~~~~~---------~~ 225 (279)
T cd05057 161 VDEK-----EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-VEIPDL---------LE 225 (279)
T ss_pred Cccc-----ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-HHHHHH---------Hh
Confidence 2211 011112224568999999988889999999999999999999 9999865432 111111 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+.....+..+...+.+++.+||..+|..||++.++++.++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 226 KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 122223344566788999999999999999999999999998754
No 272
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=6.4e-34 Score=306.09 Aligned_cols=200 Identities=31% Similarity=0.475 Sum_probs=176.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|+..+.||+|+||.||+|...+ ++.|++|.+..... .+++.+|++++++++|+||+++++++.+....++|+||
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 3678999999999999999999764 88999999875432 56899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~L~~~l~~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-- 153 (256)
T cd06612 80 CGAGSVSDIMKITN-KTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-- 153 (256)
T ss_pred CCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCc--
Confidence 99999999996533 46899999999999999999999998 9999999999999999999999999998654321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 154 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~ 202 (256)
T cd06612 154 -----AKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDI 202 (256)
T ss_pred -----cccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122344788999999999989999999999999999999999999753
No 273
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=4.4e-34 Score=312.00 Aligned_cols=202 Identities=29% Similarity=0.392 Sum_probs=175.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|++.+.||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467889999999999999999975 6899999998876666667899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++.... ..+++..++.++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-- 157 (280)
T cd06611 84 CDGGALDSIMLELE-RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-- 157 (280)
T ss_pred cCCCcHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc--
Confidence 99999999986543 35899999999999999999999999 9999999999999999999999999987543211
Q ss_pred CccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......++..|+|||.+. ...++.++||||||+++|||++|+.||...
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~ 211 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHEL 211 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccC
Confidence 1123345888999999975 345778999999999999999999999654
No 274
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=5.2e-34 Score=309.40 Aligned_cols=249 Identities=32% Similarity=0.505 Sum_probs=200.1
Q ss_pred CeeeeeCCeEEEEEEeCC-------CcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 630 TQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999876543 23456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcC-----CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-----cEEEEeecc
Q 002178 702 MSNGTLRDQLSAKS-----KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-----TAKVADFGL 771 (956)
Q Consensus 702 ~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-----~~kl~DfGl 771 (956)
+++++|.+++.... ...+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 234788999999999999999999998 99999999999999887 899999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhccc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
++........ .......++..|+|||++.+..++.++|||||||++|||++ |+.||....+... ...
T Consensus 158 ~~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~-~~~------ 225 (269)
T cd05044 158 ARDIYKSDYY-----RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEV-LQH------ 225 (269)
T ss_pred cccccccccc-----ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHH-HHH------
Confidence 9765332211 11122345678999999999999999999999999999998 9999865443221 111
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+..+.....+...+..+.+++.+||..+|.+||++.++.+.|+
T Consensus 226 ---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 226 ---VTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---HhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1111222345566788999999999999999999999998876
No 275
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-34 Score=315.59 Aligned_cols=261 Identities=23% Similarity=0.378 Sum_probs=206.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 6788999999999999999996 478999999987655555667889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.+. .+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~--- 169 (297)
T cd06656 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (297)
T ss_pred CCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc---
Confidence 999999998643 4788899999999999999999998 9999999999999999999999999987643221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC--
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG-- 860 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 860 (956)
.......+++.|+|||.+.+..++.++|||||||++|++++|+.||......... .........
T Consensus 170 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~----------~~~~~~~~~~~ 235 (297)
T cd06656 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL----------YLIATNGTPEL 235 (297)
T ss_pred ----cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe----------eeeccCCCCCC
Confidence 1122345788999999999988999999999999999999999999654321110 000000000
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCC
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDV 940 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~ 940 (956)
..+...+ ....+++.+|+..+|++|++++++++||||....
T Consensus 236 ~~~~~~~---------------------------------------~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 236 QNPERLS---------------------------------------AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred CCccccC---------------------------------------HHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 0011111 1122567778888888888888999999987766
Q ss_pred CCCccc
Q 002178 941 SGSNLV 946 (956)
Q Consensus 941 ~~~~~~ 946 (956)
.-+.+.
T Consensus 277 ~~~~~~ 282 (297)
T cd06656 277 PLSSLT 282 (297)
T ss_pred cccccC
Confidence 654443
No 276
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=2.3e-34 Score=311.85 Aligned_cols=254 Identities=21% Similarity=0.324 Sum_probs=194.5
Q ss_pred HHHHHhcCCCCCCee--eeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCC
Q 002178 618 EMALATNNFNSSTQI--GQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (956)
Q Consensus 618 ~~~~~~~~y~~~~~l--G~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 693 (956)
+.....++|++.+.+ |+|+||.||++..+ +++.+|+|.+........ |+.....+ +|+||+++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 444445677777777 99999999999964 688999999865322211 22222222 6999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLS 772 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla 772 (956)
..++||||+++++|.+++.... .+++..+..++.|+++||.|||+.+ ++||||||+||+++.++ .++|+|||++
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 9999999999999999997653 6899999999999999999999999 99999999999999998 9999999998
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
+..... ....++..|+|||++.+..++.++||||||+++|||++|+.||.......-.
T Consensus 158 ~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~----------- 215 (267)
T PHA03390 158 KIIGTP-----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELD----------- 215 (267)
T ss_pred eecCCC-----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhh-----------
Confidence 765321 1235788999999999989999999999999999999999999633211000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCC-ccCC
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-SSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa-~e~L 931 (956)
...+. ...... +. ..+..+..+.+||.+||+.||.+|+++ +|+|
T Consensus 216 --------------~~~~~----~~~~~~----~~-------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l 260 (267)
T PHA03390 216 --------------LESLL----KRQQKK----LP-------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEII 260 (267)
T ss_pred --------------HHHHH----Hhhccc----CC-------------cccccCHHHHHHHHHHhccChhhCCchHHHHh
Confidence 00000 000000 00 001223344578999999999999974 9999
Q ss_pred CCCcccc
Q 002178 932 KHPYVSS 938 (956)
Q Consensus 932 ~HP~f~~ 938 (956)
+||||.+
T Consensus 261 ~h~~~~~ 267 (267)
T PHA03390 261 KHPFLKI 267 (267)
T ss_pred cCCcccC
Confidence 9999964
No 277
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-36 Score=317.99 Aligned_cols=253 Identities=26% Similarity=0.410 Sum_probs=212.1
Q ss_pred CCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
.+.||+|.||+||-|+.+ +|+.||||++.+... ..+..+.+|+.+|+.++||.||.+.-.|+..+..+.|||.+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 478999999999999964 799999999876443 34578899999999999999999999999999999999999 67
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC---CcEEEEeeccccccCCCCCCC
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK---FTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~---~~~kl~DfGla~~~~~~~~~~ 782 (956)
+..+++-...+..+++...+.++.||+.||.|||.++ |+|+||||+|||+.+. .++||+|||.|+..+.
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE----- 719 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE----- 719 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecch-----
Confidence 7777776666677999888999999999999999999 9999999999999654 4799999999998763
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
......+.||+.|+|||+++...|...-|+||.||++|--++|..||..+++..++.+.+. . -+
T Consensus 720 ---ksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa------------F-My 783 (888)
T KOG4236|consen 720 ---KSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA------------F-MY 783 (888)
T ss_pred ---hhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccc------------c-cc
Confidence 3456678899999999999999999999999999999999999999987776655544210 0 01
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
|. + .+.+....++|||+.+|+..-++|.|.+..|.|||++.-.-
T Consensus 784 Pp----------------~-------------------PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~ 827 (888)
T KOG4236|consen 784 PP----------------N-------------------PWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQT 827 (888)
T ss_pred CC----------------C-------------------chhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchH
Confidence 11 1 11233455678999999999999999999999999976543
No 278
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.3e-34 Score=308.21 Aligned_cols=246 Identities=30% Similarity=0.485 Sum_probs=201.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
++|++.+.||+|+||.||++.. +++.||+|.+.... ..+.+.+|+.++++++|+||+++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4688899999999999999975 67889999986532 235788999999999999999999998654 4799999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++.......+++..++.++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||.+......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----- 153 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----- 153 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc-----
Confidence 999999998765556889999999999999999999998 999999999999999999999999998754211
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
......+..|+|||.+.+..++.++|||||||++|||++ |+.||...... +.... .. .+.....
T Consensus 154 -----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~-~~--------~~~~~~~ 218 (254)
T cd05083 154 -----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-EVKEC-VE--------KGYRMEP 218 (254)
T ss_pred -----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-HHHHH-Hh--------CCCCCCC
Confidence 111234567999999998899999999999999999998 88888654321 11111 11 1112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+..++..+.+++.+||+.+|++||+++++++.|+
T Consensus 219 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 219 PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 4556788899999999999999999999998875
No 279
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=4.1e-34 Score=309.86 Aligned_cols=201 Identities=27% Similarity=0.409 Sum_probs=173.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|++.+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 356777889999999999999864 6899999998765444445678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++...+ .+++.+++.++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 88 CGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred cCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 99999999986543 5889999999999999999999999 9999999999999999999999999987653211
Q ss_pred CccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......|+..|+|||++. ...++.++|||||||++|||++|+.||...
T Consensus 161 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~ 212 (267)
T cd06645 161 -----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDL 212 (267)
T ss_pred -----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccc
Confidence 1123346889999999974 456888999999999999999999998643
No 280
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5e-34 Score=310.51 Aligned_cols=199 Identities=31% Similarity=0.429 Sum_probs=175.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||.|++|.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46888899999999999999965 68999999987543 33345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++... .+++..++.++.|++.||.|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999754 6889999999999999999999998 9999999999999999999999999998764321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......++..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~ 201 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDL 201 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 1123345788999999999988999999999999999999999999643
No 281
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.3e-34 Score=307.52 Aligned_cols=251 Identities=25% Similarity=0.346 Sum_probs=190.6
Q ss_pred eeeeeCCeEEEEEEeCC---CcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCC
Q 002178 631 QIGQGGYGKVYKGILPD---GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 706 (956)
.||+|+||+||+|...+ ...+|+|.+..... .....+.+|++.++.++|+||+++++++......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 45788888764432 334578899999999999999999999999999999999999999
Q ss_pred HHHHHhhcCC---CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 707 LRDQLSAKSK---EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 707 L~~~l~~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
|.+++..... ...++.....++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-- 156 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY-- 156 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchhe--
Confidence 9999976432 23467788899999999999999998 999999999999999999999999998654322110
Q ss_pred cccceecccccCCCccccccccc-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.......++..|+|||++.. ..++.++|||||||++|||++ |..||....+....... ..... .
T Consensus 157 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~-~~~~~----~ 228 (269)
T cd05042 157 ---ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV-VREQD----I 228 (269)
T ss_pred ---eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-hhccC----c
Confidence 01122345678999999743 356789999999999999999 77788654432211111 11100 0
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
....+..+..++..+.+++..|| .+|++||++++|++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 11112234456677888899999 5999999999998875
No 282
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.3e-34 Score=311.84 Aligned_cols=238 Identities=24% Similarity=0.370 Sum_probs=188.1
Q ss_pred eeeeeCCeEEEEEEeCC-------------------------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeee
Q 002178 631 QIGQGGYGKVYKGILPD-------------------------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSL 685 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l 685 (956)
.||+|+||.||+|.... ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999997421 13588998876554445678889999999999999999
Q ss_pred ecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---
Q 002178 686 VGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF--- 762 (956)
Q Consensus 686 ~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~--- 762 (956)
++++......++||||+++|+|..++... ...+++..+..++.||++||+|||+++ |+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999998653 335788889999999999999999998 99999999999997644
Q ss_pred ----cEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHH-hCCCCCCCCc
Q 002178 763 ----TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELL-TGMQPISHGK 836 (956)
Q Consensus 763 ----~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~ell-tg~~pf~~~~ 836 (956)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||....
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred CccceeeecCCccccccccc-----------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 4899999987643211 12246788999998875 56889999999999999995 6888886543
Q ss_pred hhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 837 NIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
.... ...+. . ....+......+.+++.+||+.+|++||++.++++.|
T Consensus 227 ~~~~--~~~~~---------~-~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 227 PSEK--ERFYE---------K-KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred hHHH--HHHHH---------h-ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2111 11111 0 1112223345788999999999999999999998876
No 283
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.7e-34 Score=344.97 Aligned_cols=258 Identities=22% Similarity=0.339 Sum_probs=202.6
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccccc--C
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--E 692 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~ 692 (956)
+.....++|.+.+.||+|+||+||+|... ++..||+|.+.... ......+..|+.++++++||||++++++|.. .
T Consensus 7 ~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~ 86 (1021)
T PTZ00266 7 DGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKAN 86 (1021)
T ss_pred CCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCC
Confidence 33445578999999999999999999965 57899999887432 2335678899999999999999999998854 4
Q ss_pred CcEEEEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCC----CCEeccCCCcccEEEcC------
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEAD----PPVFHRDIKASNILLDH------ 760 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivH~Dlk~~NILl~~------ 760 (956)
...++||||+++|+|.++|... ....+++..++.|+.||+.||+|||+.+. .+||||||||+|||++.
T Consensus 87 ~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg 166 (1021)
T PTZ00266 87 QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIG 166 (1021)
T ss_pred CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccc
Confidence 5689999999999999999753 23468999999999999999999998542 34999999999999964
Q ss_pred -----------CCcEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHh
Q 002178 761 -----------KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLT 827 (956)
Q Consensus 761 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~ellt 827 (956)
.+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 167 ~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 167 KITAQANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cccccccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 3459999999997653221 1234568999999999864 458899999999999999999
Q ss_pred CCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 828 GMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 828 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
|+.||............. ...........+..+.+++..||..+|.+||++.+++.
T Consensus 239 Gk~PF~~~~~~~qli~~l----------k~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 239 GKTPFHKANNFSQLISEL----------KRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCCcCCcHHHHHHHH----------hcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 999997655433322211 10111111234577889999999999999999999984
No 284
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.3e-34 Score=312.10 Aligned_cols=239 Identities=24% Similarity=0.420 Sum_probs=191.5
Q ss_pred CeeeeeCCeEEEEEEeCC--------CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 630 TQIGQGGYGKVYKGILPD--------GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998642 234888887655545556788999999999999999999999998999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc--------EEEEeecccc
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--------AKVADFGLSR 773 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--------~kl~DfGla~ 773 (956)
+++|+|.++++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. ++++|||.+.
T Consensus 81 ~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 99999999997643 35889999999999999999999998 999999999999987765 6999999886
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCC-CCCCCCchhHHHHHHHhhcccc
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGM-QPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~-~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
.... .....++..|+|||++.+ ..++.++|||||||++|||++|. .|+..... ...... .
T Consensus 157 ~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~-~~~~~~-~----- 218 (258)
T cd05078 157 TVLP-----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDS-QKKLQF-Y----- 218 (258)
T ss_pred ccCC-----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccH-HHHHHH-H-----
Confidence 5421 122457789999999987 45789999999999999999995 44433222 111111 0
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
......|...+.++.+++.+||+.+|++||+++++++.|
T Consensus 219 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 219 -----EDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred -----HccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 112234444567899999999999999999999999876
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.7e-34 Score=305.95 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=173.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+.+|++++++++|+||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5888999999999999999964 68899999886543 23356788999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla~~~~~~~~ 780 (956)
+++++|.+++.......+++..+++++.|+++||+|||+++ ++|+||||+||+++++ +.+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS- 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc-
Confidence 99999999998765566899999999999999999999998 9999999999999855 468999999998654221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 204 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAA 204 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccC
Confidence 112345788999999999888999999999999999999999998654
No 286
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.7e-34 Score=316.49 Aligned_cols=279 Identities=26% Similarity=0.378 Sum_probs=206.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|++.+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46889999999999999999975 58899999886532 2234678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++++.+..+.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASP--GGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99887676655432 34889999999999999999999998 99999999999999999999999999987643221
Q ss_pred CCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......++..|+|||++.+. .++.++||||||+++|||++|+.||.............. . .
T Consensus 156 ------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~-------~----~ 218 (288)
T cd07833 156 ------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQK-------C----L 218 (288)
T ss_pred ------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-------H----h
Confidence 122334578899999999887 889999999999999999999999875433221111000 0 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHhHhhCCCC-CCCCccccccccCCCCCCCCCCccCCCCC
Q 002178 860 GSYPSECVEKFIKLALKCCQDETD----ARPSMSEVMRELESIWNMMPES-DTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~----~RPs~~~v~~~L~~~~~~~~~~-~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
+..+......+ ..++. +.|...+. ..+...++.. .....+|+++|+..+|++||+++++++||
T Consensus 219 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~ 286 (288)
T cd07833 219 GPLPPSHQELF--------SSNPRFAGVAFPEPSQP----ESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHP 286 (288)
T ss_pred CCCCHHHhhhc--------ccCccccccccCCCCCc----HHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCC
Confidence 11111100000 00000 00111100 0111122222 55667899999999999999999999999
Q ss_pred cc
Q 002178 935 YV 936 (956)
Q Consensus 935 ~f 936 (956)
||
T Consensus 287 ~f 288 (288)
T cd07833 287 YF 288 (288)
T ss_pred CC
Confidence 98
No 287
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.4e-34 Score=312.24 Aligned_cols=212 Identities=27% Similarity=0.401 Sum_probs=175.6
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccc-
Q 002178 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD- 690 (956)
Q Consensus 614 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~- 690 (956)
+.++.+..+.++|++.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344566678899999999999999999999864 68899999876432 2235678899999999 6999999999873
Q ss_pred ----cCCcEEEEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002178 691 ----EEGEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 691 ----~~~~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
.++..++||||+++++|.++++.. ....+++..+..++.|+++||.|||+.+ |+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCE
Confidence 345789999999999999988642 2346888999999999999999999998 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
||+|||+++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.||....
T Consensus 164 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~ 233 (286)
T cd06638 164 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLH 233 (286)
T ss_pred EEccCCceeecccCC-------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCc
Confidence 999999987653221 11223458899999999853 457889999999999999999999997543
No 288
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2e-34 Score=315.53 Aligned_cols=280 Identities=25% Similarity=0.365 Sum_probs=204.6
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccC--CcEEEEEe
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVYE 700 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV~e 700 (956)
|++.+.||+|++|.||+|... +++.||+|++.... ......+.+|++++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 667889999999999999976 58999999998653 23345788999999999999999999999887 89999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++ ++|.+++.... ..+++..++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++........
T Consensus 81 ~~~-~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMD-HDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred ccc-ccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 996 59998886543 46899999999999999999999998 99999999999999999999999999986643321
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ......... .
T Consensus 156 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~----------~ 218 (287)
T cd07840 156 ------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFEL----------C 218 (287)
T ss_pred ------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHH----------h
Confidence 11223356788999998765 45788999999999999999999999754432 111111100 0
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCC-CCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPE-SDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~-~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..........+.++ +.......++.....+ ... +.. ......+++++|+..+|++||+++++++||||
T Consensus 219 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 219 GSPTDENWPGVSKL---PWFENLKPKKPYKRRL---REF---FKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCCchhhccccccc---hhhhhccccccchhHH---HHH---hcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00111111111111 1111111111111111 111 111 14456789999999999999999999999997
No 289
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.5e-34 Score=320.49 Aligned_cols=289 Identities=24% Similarity=0.372 Sum_probs=208.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccC-----CcE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQ 695 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~ 695 (956)
+++|++.+.||+|+||.||+|... +|+.||+|.+.... ......+.+|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999864 68999999986422 22345678899999999999999999886543 357
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++|+||++ ++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999995 588888754 35889999999999999999999999 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
...... ........|+..|+|||.+.+ ..++.++||||+||++|||++|+.||....... ..... ...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~------~~~ 225 (336)
T cd07849 157 DPEHDH----TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLI------LGV 225 (336)
T ss_pred cccccc----cCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH------HHH
Confidence 432211 111233468899999998765 568899999999999999999999996543221 11110 001
Q ss_pred ccCCCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCC
Q 002178 855 IDGNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
++..+.+....+.... ...+...|.. +... .....+..+....+++.+||..||++|||++|+++|
T Consensus 226 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 226 ----LGTPSQEDLNCIISLRARNYIKSLPFK-PKVP--------WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred ----cCCCCHHHHHHhhchhhhhHHhhcCcC-Cccc--------HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111111111111 1111111111 1110 001123345667799999999999999999999999
Q ss_pred CccccCCCC
Q 002178 934 PYVSSDVSG 942 (956)
Q Consensus 934 P~f~~~~~~ 942 (956)
|||..-...
T Consensus 293 p~~~~~~~~ 301 (336)
T cd07849 293 PYLEQYHDP 301 (336)
T ss_pred ccccccCCC
Confidence 999766554
No 290
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.8e-34 Score=311.65 Aligned_cols=280 Identities=24% Similarity=0.403 Sum_probs=207.1
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
+|++.++||+|++|.||+|+.. +|+.||+|.++..... ....+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999975 6899999998754332 3456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcC-CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 703 SNGTLRDQLSAKS-KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 703 ~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+ ++|.+++.... ...+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-- 154 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-- 154 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc--
Confidence 7 58999886543 346899999999999999999999998 9999999999999999999999999997543211
Q ss_pred CccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.......++..|++||++.+ ..++.++|||||||++|||++|+.||....... ....... . ..
T Consensus 155 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~------~----~~ 218 (284)
T cd07836 155 -----NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFR------I----MG 218 (284)
T ss_pred -----cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHH------H----hC
Confidence 11123346789999999866 457889999999999999999999997554322 1111110 0 00
Q ss_pred CCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 861 SYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 861 ~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
.........+... .. +..+...+ ..... ....+..+....+++.+|++.||++|++++|+++||||
T Consensus 219 ~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 219 TPTESTWPGISQL-PE-YKPTFPRY-PPQDL-------QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CCChhhHHHHhcC-ch-hcccccCC-ChHHH-------HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 1111111111110 00 11111111 11111 11123335566789999999999999999999999998
No 291
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.6e-34 Score=311.88 Aligned_cols=199 Identities=31% Similarity=0.454 Sum_probs=173.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.++|++.+.||+|+||+||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 356888899999999999999965 68999999876543 3345688999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|+++++|.+++... ..+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 84 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~- 157 (284)
T cd06620 84 FMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS- 157 (284)
T ss_pred cCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh-
Confidence 99999999998664 358899999999999999999997 46 999999999999999999999999998654211
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......|+..|+|||++.+..++.++|||||||++||+++|+.||...
T Consensus 158 --------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~ 205 (284)
T cd06620 158 --------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFS 205 (284)
T ss_pred --------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCccc
Confidence 112345889999999998889999999999999999999999999753
No 292
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.3e-34 Score=318.92 Aligned_cols=286 Identities=24% Similarity=0.324 Sum_probs=201.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCC------
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 693 (956)
-++|++.++||+|+||.||+|... +++.||||.+..... .....+.+|++++++++||||+++++++...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357899999999999999999965 689999998864322 22345678999999999999999999876543
Q ss_pred --cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 694 --EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 694 --~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
..++||||+. ++|.+++.... ..+++.+++.++.||+.||+|||+++ ++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN-VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCC
Confidence 4599999995 58988886543 35899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
+.......... ........++..|+|||.+.+. .++.++||||||+++|||++|+.||.............
T Consensus 166 ~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~----- 237 (310)
T cd07865 166 ARAFSLSKNSK---PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS----- 237 (310)
T ss_pred cccccCCcccC---CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-----
Confidence 98664332110 1112234577899999988764 47889999999999999999999987544321111100
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhccc--CCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCc
Q 002178 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQD--ETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~--~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
.+ .+..+.+.......+ .++.. .|.. ....+...+. ....+....+++.+|+..||++|||++
T Consensus 238 --~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~l~-----~~~~~~~~~dli~~~l~~~P~~R~t~~ 302 (310)
T cd07865 238 --QL----CGSITPEVWPGVDKL--ELFKKMELPQG--QKRKVKERLK-----PYVKDPHALDLIDKLLVLDPAKRIDAD 302 (310)
T ss_pred --HH----hCCCChhhcccccch--hhhhhccCCCc--cchhhHHhcc-----cccCCHHHHHHHHHHhcCChhhccCHH
Confidence 00 111111111111000 00000 0110 0000111110 011234456899999999999999999
Q ss_pred cCCCCCcc
Q 002178 929 SMLKHPYV 936 (956)
Q Consensus 929 e~L~HP~f 936 (956)
|+|+||||
T Consensus 303 e~l~h~~f 310 (310)
T cd07865 303 TALNHDFF 310 (310)
T ss_pred HHhcCCCC
Confidence 99999998
No 293
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=7.5e-34 Score=315.67 Aligned_cols=293 Identities=20% Similarity=0.216 Sum_probs=199.8
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCC
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 706 (956)
.+.+|.|+++.||++.. +++.||||++... .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33445555555555544 6899999998754 33345688999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcccc
Q 002178 707 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 786 (956)
Q Consensus 707 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 786 (956)
|.+++.......+++.....++.|+++||+|||+++ |+||||||+||+++.++.+||+|||.+..............
T Consensus 86 l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 86 CEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 999998765556889999999999999999999999 99999999999999999999999999875532221111111
Q ss_pred ceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 787 HVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 787 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||.............. ......++... .+.
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~ 238 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPCLLDKST--YPL 238 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCccccccCc--hhh
Confidence 12233457788999999876 4588899999999999999999999976543322211110 00001111000 000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCHHH-HHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCCC
Q 002178 865 ECVEKFIKLALKCCQDETDARPSMSE-VMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 865 ~~~~~l~~l~~~c~~~~p~~RPs~~~-v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
.. ..... .+ .+...+.... .-..... .......+|+.+||.+||++|||++|+|+||||+....+
T Consensus 239 ~~-~~~~~---~~---~~~~~~~~~~~~~~~~~~------~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~~~ 304 (314)
T cd08216 239 YE-DSMSQ---SR---SSNEHPNNRDSVDHPYTR------TFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCKRR 304 (314)
T ss_pred hc-CCcCc---cc---ccccccchhhhhhcchhh------HHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhccc
Confidence 00 00000 00 0000000000 0000000 001234578999999999999999999999999866544
No 294
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-33 Score=304.46 Aligned_cols=203 Identities=28% Similarity=0.419 Sum_probs=177.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|++.+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367889999999999999999964 5789999998865555567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+|+||||+||++++++.+||+|||.+.......
T Consensus 82 ~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 155 (262)
T cd06613 82 CGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-- 155 (262)
T ss_pred CCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh--
Confidence 9999999998764 245889999999999999999999998 9999999999999999999999999987653211
Q ss_pred CccccceecccccCCCcccccccccC---CCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......++..|+|||.+.+. .++.++||||||+++|||++|+.||....
T Consensus 156 -----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~ 208 (262)
T cd06613 156 -----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLH 208 (262)
T ss_pred -----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCC
Confidence 112234578899999999876 88999999999999999999999997544
No 295
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.1e-33 Score=307.93 Aligned_cols=254 Identities=27% Similarity=0.422 Sum_probs=204.8
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC------CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP------DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQM 696 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~ 696 (956)
++|++...||+|+||+||+|+.+ +.+.|++|.+...... ..+.+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999864 2467999988754433 3567899999999999999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhcCC-------CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002178 697 LVYEFMSNGTLRDQLSAKSK-------EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~-------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
+||||+++|+|.++++.... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 99999999999999976441 25899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002178 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~ 848 (956)
|++........ .......++..|+|||.+.+..++.++||||||+++|||++ |..||...... ..+...
T Consensus 162 ~~~~~~~~~~~------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~--- 231 (275)
T cd05046 162 SLSKDVYNSEY------YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE-EVLNRL--- 231 (275)
T ss_pred ccccccCcccc------cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH-HHHHHH---
Confidence 99875432211 11122345678999999988888999999999999999999 77888643321 111111
Q ss_pred ccchhhccCCC-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 849 SMMFSVIDGNM-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 849 ~~~~~~~~~~~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
..+.. ...+..++..+.+++.+|++.+|.+||++.++++.|.
T Consensus 232 ------~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 232 ------QAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred ------HcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 10111 1223456678999999999999999999999998764
No 296
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.2e-33 Score=304.11 Aligned_cols=203 Identities=31% Similarity=0.450 Sum_probs=170.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHHhcCCCceeeeeccccc--CCcE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 695 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 695 (956)
.+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++|+||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47889999999999999999964 58999999876422 1233568889999999999999999998865 3567
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... .+++...+.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 89999999999999997543 4788889999999999999999998 999999999999999999999999998765
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
...... ........++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 157 QTICMS----GTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred cccccc----CCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 321111 11112345788999999999988999999999999999999999999643
No 297
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=319.40 Aligned_cols=200 Identities=25% Similarity=0.413 Sum_probs=173.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
+-|.++..||.|+||+||+|..++ +-..|.|++...+.....+|.-|+++|....||+||++++.|..++.+++..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 345567789999999999999764 5556778887767777789999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
.||-.+..+-.-+ .++.+.++.-+++|++.||.|||++. |||||||+.|||++-+|.++|+|||.+.....
T Consensus 112 ~GGAVDaimlEL~-r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~----- 182 (1187)
T KOG0579|consen 112 GGGAVDAIMLELG-RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKS----- 182 (1187)
T ss_pred CCchHhHHHHHhc-cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchh-----
Confidence 9999999886643 46999999999999999999999999 99999999999999999999999999754321
Q ss_pred ccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
.........||+.|||||+.+ ..+|++++||||||++|.||..+.+|...
T Consensus 183 --t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhe 237 (1187)
T KOG0579|consen 183 --TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHE 237 (1187)
T ss_pred --HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccc
Confidence 233456678999999999986 46899999999999999999999888754
No 298
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=3.2e-34 Score=315.47 Aligned_cols=284 Identities=23% Similarity=0.347 Sum_probs=206.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++|++.+.||+|++|+||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 47889999999999999999975 689999998865332 223568889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccccCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~ 779 (956)
|++ ++|.+++.......+++..+..++.||+.||+|||+++ ++||||||+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 995 68988886655555688888899999999999999998 999999999999985 5679999999997643211
Q ss_pred CCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.......++..|+|||++.+ ..++.++||||+||++|||+||+.||............ +. ..
T Consensus 158 -------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~-~~------~~--- 220 (294)
T PLN00009 158 -------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKI-FR------IL--- 220 (294)
T ss_pred -------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HH------Hh---
Confidence 11123356789999999876 45788999999999999999999999754432221111 00 00
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcccc
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
+......+.....+-.. ....|..++.. .....+.....+.+++.+|++.+|++||+++++++||||..
T Consensus 221 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~ 289 (294)
T PLN00009 221 -GTPNEETWPGVTSLPDY-KSAFPKWPPKD---------LATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD 289 (294)
T ss_pred -CCCChhhccccccchhh-hhhcccCCCCC---------HHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence 00001010000000000 00011111110 01112344555678999999999999999999999999975
Q ss_pred C
Q 002178 939 D 939 (956)
Q Consensus 939 ~ 939 (956)
-
T Consensus 290 ~ 290 (294)
T PLN00009 290 L 290 (294)
T ss_pred H
Confidence 3
No 299
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=4.6e-34 Score=311.33 Aligned_cols=247 Identities=26% Similarity=0.399 Sum_probs=198.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4556778999999999999865 58899999887433 334467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.. ..+++..+..++.|+++|+.|||+++ ++|+||+|+||++++++.++++|||++.......
T Consensus 85 ~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06642 85 GGGSALDLLKP---GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc---
Confidence 99999999854 35788999999999999999999998 9999999999999999999999999997654221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......++..|+|||++.+..++.++|||||||++|||++|+.|+........ .. .+........
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~---------~~~~~~~~~~ 221 (277)
T cd06642 156 ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-LF---------LIPKNSPPTL 221 (277)
T ss_pred ----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH-Hh---------hhhcCCCCCC
Confidence 111224578899999999998899999999999999999999999864322110 00 1111112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
+..++..+.+++.+|++.+|++||++.++++.
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 222 EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 44556677888888888888888888888763
No 300
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.3e-33 Score=308.56 Aligned_cols=210 Identities=29% Similarity=0.452 Sum_probs=176.0
Q ss_pred cHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeeccccc-
Q 002178 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE- 691 (956)
Q Consensus 615 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~- 691 (956)
++.++....+.|++.+.||+|+||.||+|... +++.||+|.+.... .....+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555667789999999999999999999964 68999999886533 2345678899999998 69999999999843
Q ss_pred -----CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEE
Q 002178 692 -----EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 692 -----~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
....++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 457899999999999999997765566888889999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
+|||++....... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 163 ~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~ 229 (282)
T cd06636 163 VDFGVSAQLDRTV-------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDM 229 (282)
T ss_pred eeCcchhhhhccc-------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCcccc
Confidence 9999987543211 1122345888999999986 346788999999999999999999999643
No 301
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=6.6e-34 Score=311.04 Aligned_cols=267 Identities=27% Similarity=0.444 Sum_probs=207.7
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-----CCcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeeccccc--CCcE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-----DGTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQ 695 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~ 695 (956)
..|+..+.||+|+||.||+|.+. +++.||||.+...... ..+.+.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777889999999999999853 3689999998865443 45689999999999999999999999876 5578
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... ..+++..+..++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 99999999999999997643 25899999999999999999999998 999999999999999999999999999876
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHH-HHH---hhcccc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV-NIA---YQSSMM 851 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~-~~~---~~~~~~ 851 (956)
...... ........++..|+|||.+.+..++.++||||||+++|||++|+.|+.......... ... .....+
T Consensus 160 ~~~~~~----~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 160 PEDKDY----YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred ccCCcc----eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 422110 111112335567999999998899999999999999999999999986432111000 000 000000
Q ss_pred hhhcc-CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 852 FSVID-GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 852 ~~~~~-~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.+.+. ......+..++.++.+++.+|++.+|++||++.+++++|+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 236 LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 11111 112233455668899999999999999999999999999865
No 302
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-33 Score=307.04 Aligned_cols=247 Identities=26% Similarity=0.404 Sum_probs=197.3
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+++++++.|+||+++++++.++...++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 45777889999999999999965 58899999887543 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++|+|.+++.. .++++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 84 LGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 999999999864 34788889999999999999999998 9999999999999999999999999997654321
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||++.+..++.++|||||||++|||++|..||........ .. .+.......
T Consensus 156 -----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-~~---------~~~~~~~~~ 220 (277)
T cd06640 156 -----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-LF---------LIPKNNPPT 220 (277)
T ss_pred -----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-hh---------hhhcCCCCC
Confidence 112234578899999999988899999999999999999999999865432111 00 011111223
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.+..++..+.+++.+||+.+|++||++.++++
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06640 221 LTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252 (277)
T ss_pred CchhhhHHHHHHHHHHcccCcccCcCHHHHHh
Confidence 44556666777777777777777777666654
No 303
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.2e-34 Score=311.54 Aligned_cols=200 Identities=28% Similarity=0.378 Sum_probs=170.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeeccccc--CCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~LV~ 699 (956)
++|+..+.||.|++|.||+|... +++.||+|.+..... .....+.+|++++++++||||++++++|.. .+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999975 689999998875332 345678999999999999999999998854 34789999
Q ss_pred ecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 700 EFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 700 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
||+++++|.+++.. .....+++..+..++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999998764 23345788999999999999999999998 99999999999999999999999999875432
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.. .....++..|+|||.+.+..++.++||||+||++|||++|+.||...
T Consensus 158 ~~---------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 206 (287)
T cd06621 158 SL---------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPE 206 (287)
T ss_pred cc---------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 11 12334778999999999999999999999999999999999999643
No 304
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.4e-33 Score=308.92 Aligned_cols=257 Identities=21% Similarity=0.375 Sum_probs=202.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
+|...+.||+|++|.||+|... +++.|++|++........+.+.+|+.+++.++|+||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 3445678999999999999964 689999999876555556678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||+|+||+++.++.++|+|||.+.......
T Consensus 100 ~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---- 169 (285)
T cd06648 100 GGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---- 169 (285)
T ss_pred CCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC----
Confidence 9999999866 34788999999999999999999999 9999999999999999999999999887543211
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
.......|+..|+|||.+.+..++.++||||||+++|||++|+.||....... ....
T Consensus 170 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~-~~~~------------------- 226 (285)
T cd06648 170 ---PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ-AMKR------------------- 226 (285)
T ss_pred ---cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH-HHHH-------------------
Confidence 11223458899999999998889999999999999999999999986433211 1100
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 864 SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+.... .|...+ .........+++++|+..+|++||+++|+++||||.....
T Consensus 227 ----------~~~~~------~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 227 ----------IRDNL------PPKLKN-----------LHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred ----------HHhcC------CCCCcc-----------cccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 00000 000000 0001122346888889999999999999999999977554
No 305
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.2e-34 Score=311.17 Aligned_cols=190 Identities=27% Similarity=0.391 Sum_probs=158.0
Q ss_pred eeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHh---cCCCceeeeecccccCCcEEEEEecCC
Q 002178 631 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSR---LHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~---l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
.||+|+||.||++... +++.||+|.+..... .....+.+|..+++. .+|+||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 689999998865322 122334455444433 479999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|+|.+++.... .+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 999999987543 5899999999999999999999999 9999999999999999999999999987543211
Q ss_pred cccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 198 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQ 198 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCC
Confidence 122358999999999864 5688999999999999999999999964
No 306
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.9e-33 Score=301.88 Aligned_cols=203 Identities=29% Similarity=0.433 Sum_probs=170.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHHhcCCCceeeeecccccC--CcE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 695 (956)
++|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999965 58999999875321 12235788899999999999999999988653 467
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++.... .+++...++++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 89999999999999997543 4778888999999999999999999 999999999999999999999999998765
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
...... ........|+..|+|||.+.+..++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 157 QTICLS----GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred cccccc----ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 322110 11122345888999999999888999999999999999999999999643
No 307
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4.1e-34 Score=319.71 Aligned_cols=204 Identities=24% Similarity=0.302 Sum_probs=164.8
Q ss_pred Ceeeee--CCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQG--GYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
..||+| +||+||+|... +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 99999999964 79999999987533 23346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+|++||+.+............
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99999998765556889999999999999999999998 999999999999999999999999865433211110000
Q ss_pred ccceecccccCCCcccccccccC--CCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.........++..|+|||++.+. .++.++|||||||++|||++|+.||....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~ 214 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDML 214 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcC
Confidence 00001112355679999999763 47889999999999999999999997654
No 308
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.7e-33 Score=309.15 Aligned_cols=211 Identities=30% Similarity=0.444 Sum_probs=174.7
Q ss_pred ccHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeeccccc
Q 002178 614 FTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE 691 (956)
Q Consensus 614 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~ 691 (956)
+...++..++++|++.+.||+|+||.||+|... +++.+|+|.+.... .....+.+|+.+++++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 334455556889999999999999999999964 68999999986532 2245678899999998 79999999999854
Q ss_pred C-----CcEEEEEecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcE
Q 002178 692 E-----GEQMLVYEFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTA 764 (956)
Q Consensus 692 ~-----~~~~LV~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~ 764 (956)
. +..++||||+++++|.++++.. ....+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 3 3689999999999999988642 3346889999999999999999999998 9999999999999999999
Q ss_pred EEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-----CCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 765 KVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 765 kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
||+|||++....... .......|+..|+|||++... .++.++|||||||++|||++|+.||...
T Consensus 168 kl~dfg~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~ 236 (291)
T cd06639 168 KLVDFGVSAQLTSTR-------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDM 236 (291)
T ss_pred EEeecccchhccccc-------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCC
Confidence 999999987654221 111234578899999998643 3688999999999999999999999654
No 309
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.4e-33 Score=301.88 Aligned_cols=199 Identities=30% Similarity=0.480 Sum_probs=172.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-----hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-----LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+|+..+.||+|++|.||+|... +++.|++|.+.... .+..+.+.+|++++++++|+||+++++++..+...++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4777889999999999999976 78999999876433 22346788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... .+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999997643 4789999999999999999999998 999999999999999999999999998765322
Q ss_pred CCCCccccceecccccCCCcccccccccCC-CCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK-LTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
. ......|+..|+|||.+.... ++.++|+|||||++|||++|+.||....
T Consensus 156 ~--------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~ 206 (258)
T cd06632 156 S--------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE 206 (258)
T ss_pred c--------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc
Confidence 1 123345788999999987766 8999999999999999999999996543
No 310
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-33 Score=303.25 Aligned_cols=250 Identities=34% Similarity=0.550 Sum_probs=203.9
Q ss_pred CCCCCeeeeeCCeEEEEEEeCC-----CcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 626 FNSSTQIGQGGYGKVYKGILPD-----GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
+++.+.||+|+||.||++...+ +..||+|.+...... ..+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999753 388999999765443 4678899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++.......
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999999999997654433899999999999999999999998 9999999999999999999999999998765332
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.. ......++..|+|||.+.+..++.++||||+|++++||++ |+.||..... ...... +....
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~-~~~~~~---------~~~~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN-EEVLEY---------LKKGY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHH---------HhcCC
Confidence 11 1112236789999999988889999999999999999998 7777764322 111111 11122
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
....+...+.++.+++.+|+..+|++||++.++++.
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 233445577889999999999999999999998865
No 311
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.9e-34 Score=319.28 Aligned_cols=290 Identities=22% Similarity=0.355 Sum_probs=212.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccccc----CCcE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE----EGEQ 695 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~----~~~~ 695 (956)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++|+||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 478999999999999999999965 68999999987532 2234567889999999999999999998753 3468
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+. ++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 6999988654 34899999999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
...... .........|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... .....
T Consensus 158 ~~~~~~---~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~--------- 224 (334)
T cd07855 158 SSSPTE---HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLI--------- 224 (334)
T ss_pred cccCcC---CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHH---------
Confidence 432211 1112233468889999999865 568899999999999999999999996543321 11110
Q ss_pred ccCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCC
Q 002178 855 IDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKH 933 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~H 933 (956)
....+..+.+..... .+.+..+++..+...+... ....+.......+++.+|+..||++||++++++.|
T Consensus 225 -~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 225 -LSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPW---------SKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred -HHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCH---------HHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 001111222221111 1122233333333222111 01123335556789999999999999999999999
Q ss_pred CccccCCC
Q 002178 934 PYVSSDVS 941 (956)
Q Consensus 934 P~f~~~~~ 941 (956)
|||..-..
T Consensus 295 ~~~~~~~~ 302 (334)
T cd07855 295 PFLAQYHD 302 (334)
T ss_pred hhhhhccC
Confidence 99964443
No 312
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.7e-33 Score=303.74 Aligned_cols=251 Identities=24% Similarity=0.354 Sum_probs=188.6
Q ss_pred eeeeeCCeEEEEEEeCCC---cEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCC
Q 002178 631 QIGQGGYGKVYKGILPDG---TVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 706 (956)
.||+|+||+||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 599999999999985432 356677766433 3345689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 707 LRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 707 L~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|.++++... ....++..++.++.||++||+|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~---- 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY---- 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchh----
Confidence 999997642 234667778899999999999999998 99999999999999999999999999864321110
Q ss_pred ccceecccccCCCccccccccc-------CCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLT-------HKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
........++..|+|||++.. ..++.++|||||||++|||++ |..||...... +........ ......+
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~-~~~~~~~ 231 (268)
T cd05086 155 -IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIKD-QQVKLFK 231 (268)
T ss_pred -hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhh-cccccCC
Confidence 111123457889999999753 245778999999999999997 56677544332 211111111 1111111
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
+..+....+.+.+++..|| .+|++||++.++++.|
T Consensus 232 ---~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 232 ---PQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred ---CccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 2223345677888999999 6799999999998876
No 313
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.2e-34 Score=319.48 Aligned_cols=284 Identities=23% Similarity=0.360 Sum_probs=207.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccC---------
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--------- 692 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--------- 692 (956)
..+|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999964 6899999998766555567788999999999999999999876543
Q ss_pred -----CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-CCCcEEE
Q 002178 693 -----GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-HKFTAKV 766 (956)
Q Consensus 693 -----~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-~~~~~kl 766 (956)
...++||||++ ++|.+++.. ..+++..++.++.||+.||.|||+.+ |+||||||+||+++ +++.+|+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl 156 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKI 156 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEE
Confidence 35789999996 699888853 24788999999999999999999999 99999999999997 4567899
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002178 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
+|||+++........ ........++..|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 157 ~dfg~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~- 231 (342)
T cd07854 157 GDFGLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLI- 231 (342)
T ss_pred CCcccceecCCcccc----ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-
Confidence 999999765322110 111122357889999998754 56788999999999999999999999765443221111
Q ss_pred hhcccchhhccCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCC
Q 002178 846 YQSSMMFSVIDGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETP 924 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R 924 (956)
++. .+....+....+ ..+...+.......+.+..+ ..+..+....+|+.+||+.||++|
T Consensus 232 ---------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~R 291 (342)
T cd07854 232 ---------LES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRD----------LLPGVNPEALDFLEQILTFNPMDR 291 (342)
T ss_pred ---------HHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHH----------HccCCCHHHHHHHHHHhCCCchhc
Confidence 111 111111111111 12222222112111212221 123344556689999999999999
Q ss_pred CCCccCCCCCcccc
Q 002178 925 PSSSSMLKHPYVSS 938 (956)
Q Consensus 925 ~sa~e~L~HP~f~~ 938 (956)
+|++|++.||||+.
T Consensus 292 ~t~~ell~h~~~~~ 305 (342)
T cd07854 292 LTAEEALMHPYMSC 305 (342)
T ss_pred cCHHHHhCCCcccc
Confidence 99999999999963
No 314
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=7.9e-34 Score=306.74 Aligned_cols=192 Identities=24% Similarity=0.382 Sum_probs=167.8
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||.|++|.||+|... +++.||+|.+..... ...+.+.+|++++++++|+||+++++++.++...++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 489999999865332 3346789999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++.+. ..+++..+..++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-------- 147 (262)
T cd05572 81 WTILRDR--GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-------- 147 (262)
T ss_pred HHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--------
Confidence 9999764 34888999999999999999999998 9999999999999999999999999998654321
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
......++..|+|||.+.+..++.++|+||+|+++|||++|..||....
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 196 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDD 196 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCC
Confidence 1223457889999999988889999999999999999999999997543
No 315
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.2e-33 Score=303.88 Aligned_cols=255 Identities=29% Similarity=0.437 Sum_probs=199.7
Q ss_pred CCCCCeeeeeCCeEEEEEEeC----CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCC------
Q 002178 626 FNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG------ 693 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~------ 693 (956)
|.+.+.||+|+||.||+|.+. +++.||||++.... ....+++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999853 36889999987542 233567889999999999999999999875432
Q ss_pred cEEEEEecCCCCCHHHHHhhc----CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEee
Q 002178 694 EQMLVYEFMSNGTLRDQLSAK----SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADF 769 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~Df 769 (956)
..++++||+++|+|.+++... ....+++...+.++.|++.||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 347899999999999887532 1235788899999999999999999998 999999999999999999999999
Q ss_pred ccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002178 770 GLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 770 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~ 848 (956)
|.++....... ........++..|++||.+....++.++|||||||++|||++ |+.||..... .+....
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-~~~~~~---- 227 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-SEIYNY---- 227 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-HHHHHH----
Confidence 99986532211 011122335678999999998889999999999999999999 8888864432 111111
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 849 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+........+...+..+.+++.+|++.+|++||++.++.+.|+++
T Consensus 228 -----~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 -----LIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -----HHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 111111223345667899999999999999999999999999865
No 316
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.3e-33 Score=301.14 Aligned_cols=203 Identities=32% Similarity=0.468 Sum_probs=174.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|+||.||+|... +++.||+|.++..... ..+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5888999999999999999964 6899999998765442 457889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++... ..+++..++.++.|+++||.|||+.+ |+|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999999999764 34788899999999999999999999 999999999999999999999999999876433211
Q ss_pred CccccceecccccCCCcccccccccCC---CCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHK---LTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
. ........++..|+|||++.+.. ++.++||||||+++||+++|+.||...
T Consensus 156 ~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~ 209 (264)
T cd06626 156 M---GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSEL 209 (264)
T ss_pred c---cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCC
Confidence 0 11012345788999999998766 889999999999999999999999654
No 317
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.1e-33 Score=303.78 Aligned_cols=199 Identities=28% Similarity=0.443 Sum_probs=174.2
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|+..+.||+|++|.||++... +++.||+|.+.... ....+++.+|++++++++||||+++++++..+...++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36778889999999999999976 68999999887643 34456789999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
+++++|.+++.... ..+++..+..++.|++.||+|||+ .+ ++|+||||+||++++++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~- 155 (265)
T cd06605 81 MDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL- 155 (265)
T ss_pred cCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH-
Confidence 99999999997643 568889999999999999999999 88 9999999999999999999999999987543211
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 202 (265)
T cd06605 156 --------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPE 202 (265)
T ss_pred --------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence 11156788999999999999999999999999999999999999654
No 318
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.6e-33 Score=303.96 Aligned_cols=251 Identities=20% Similarity=0.361 Sum_probs=201.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeCC--CcEEEEEEecCCC----------hhhHHHHHHHHHHHHh-cCCCceeeeeccccc
Q 002178 625 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGS----------LQGEKEFLTEIQFLSR-LHHRNLVSLVGYCDE 691 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~-l~h~nIv~l~~~~~~ 691 (956)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... .....++.+|+.++.+ ++|+||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999754 7889999875321 1223457788888765 799999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
++..++||||+++++|.+++.. .....+++..++.++.|++.||.|||+ .+ ++|+||||+||++++++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998854 234468899999999999999999996 56 99999999999999999999999
Q ss_pred eccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhc
Q 002178 769 FGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 769 fGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~ 848 (956)
||.+....... ......|+..|+|||.+.+..++.++||||||+++|||++|+.||...... .....
T Consensus 158 fg~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~---- 224 (269)
T cd08528 158 FGLAKQKQPES--------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATK---- 224 (269)
T ss_pred ccceeeccccc--------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHH----
Confidence 99997654221 223445888999999999888999999999999999999999999654322 11111
Q ss_pred ccchhhccCCCCCCC-hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 849 SMMFSVIDGNMGSYP-SECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 849 ~~~~~~~~~~~~~~~-~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
+..+...+.+ ..++..+.+++.+||+.+|++||++.++..+++
T Consensus 225 -----~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 225 -----IVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred -----HhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 1111111222 245678999999999999999999999998775
No 319
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.3e-34 Score=315.65 Aligned_cols=288 Identities=26% Similarity=0.361 Sum_probs=203.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccC-------
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------- 692 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------- 692 (956)
.++|++.++||+|+||.||+|... +++.||+|++...... ....+.+|++++++++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999965 6899999988643322 234677899999999999999999987443
Q ss_pred -CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 693 -GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 693 -~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
...++||||++ +++...+... ...+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||+
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCcc
Confidence 34699999995 5787777543 346899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCcc----ccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHh
Q 002178 772 SRLAPVPDIEGIV----PAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAY 846 (956)
Q Consensus 772 a~~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~ 846 (956)
++........... .........+++.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ......+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 9765432211110 1112234467889999998865 45788999999999999999999998654432 2111111
Q ss_pred hcccchhhccCCCCCCChHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCC
Q 002178 847 QSSMMFSVIDGNMGSYPSECVEKFIKLALKC-CQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c-~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~ 925 (956)
. .. ...++........+.... +...+...+...+ .++.......+|+.+||..||++||
T Consensus 241 ~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~i~~~l~~~p~~R~ 300 (311)
T cd07866 241 K------LC----GTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE----------RFGKLGPEGLDLLSKLLSLDPYKRL 300 (311)
T ss_pred H------Hh----CCCChhhchhhhhcccccccccCCCCCccHHH----------HcccCChhHHHHHHHHcccCcccCc
Confidence 0 00 001111011000000000 0001111111111 1223335567899999999999999
Q ss_pred CCccCCCCCcc
Q 002178 926 SSSSMLKHPYV 936 (956)
Q Consensus 926 sa~e~L~HP~f 936 (956)
|+.|++.||||
T Consensus 301 t~~ell~~~~f 311 (311)
T cd07866 301 TASDALEHPYF 311 (311)
T ss_pred CHHHHhcCCCC
Confidence 99999999998
No 320
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=1.1e-33 Score=318.19 Aligned_cols=284 Identities=21% Similarity=0.335 Sum_probs=208.1
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccC
Q 002178 616 YGEMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE 692 (956)
Q Consensus 616 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~ 692 (956)
.+++...+++|++.+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++|+||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 345666789999999999999999999985 478999999987532 22345678899999999999999999987532
Q ss_pred ------CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEE
Q 002178 693 ------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 693 ------~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
...++|++++ +++|.+++... .+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl 161 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKI 161 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEE
Confidence 3478888887 88999888543 4889999999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHH
Q 002178 767 ADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIA 845 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~ 845 (956)
+|||+++.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ....
T Consensus 162 ~dfg~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~ 230 (345)
T cd07877 162 LDFGLARHTDD----------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLI 230 (345)
T ss_pred ecccccccccc----------cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH
Confidence 99999875421 1123457889999999876 5688899999999999999999999965433211 1110
Q ss_pred hhcccchhhccCCCCCCChHHHHHH----HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCC
Q 002178 846 YQSSMMFSVIDGNMGSYPSECVEKF----IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 921 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP 921 (956)
.. . .+..+......+ ......+....|..+. . +......+...+++.+||..||
T Consensus 231 ~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~~~~~~li~~~L~~dp 288 (345)
T cd07877 231 LR---------L-VGTPGAELLKKISSESARNYIQSLTQMPKMNF--A----------NVFIGANPLAVDLLEKMLVLDS 288 (345)
T ss_pred HH---------H-hCCCCHHHHhhcccHhHHHHHHHhcccCCcch--h----------hhcCCCCHHHHHHHHHHcCCCh
Confidence 00 0 001111111111 1111112222221111 0 0111234456789999999999
Q ss_pred CCCCCCccCCCCCccccC
Q 002178 922 ETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 922 ~~R~sa~e~L~HP~f~~~ 939 (956)
++|+++.|+++||||..-
T Consensus 289 ~~R~t~~e~l~h~~f~~~ 306 (345)
T cd07877 289 DKRITAAQALAHAYFAQY 306 (345)
T ss_pred hhcCCHHHHhcChhhhhc
Confidence 999999999999999753
No 321
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.2e-33 Score=308.67 Aligned_cols=276 Identities=24% Similarity=0.350 Sum_probs=198.8
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcC-CCceeeeecccccC--CcEEEEEe
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLVYE 700 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~LV~e 700 (956)
|++.+.||+|+||.||+|... +++.||+|+++.... .......+|+.+++++. |+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999964 689999999875322 22234567889999885 99999999999877 89999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|++ |+|.+.+.... ..+++..++.++.|++.||+|||+.+ ++||||||+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~- 153 (282)
T cd07831 81 LMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP- 153 (282)
T ss_pred cCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC-
Confidence 996 68888886543 46899999999999999999999998 999999999999999 999999999997653221
Q ss_pred CCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
......++..|+|||++.. ..++.++|||||||++|||++|+.||....... .+.... ...
T Consensus 154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~~----------~~~ 215 (282)
T cd07831 154 -------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKIH----------DVL 215 (282)
T ss_pred -------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHHH----------HHc
Confidence 1122357889999998654 557889999999999999999999996544321 111100 001
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
+..++.....+..- ...-...|..-+. .+....+.......+++.+||..+|++||+++++++||||
T Consensus 216 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 216 GTPDAEVLKKFRKS-RHMNYNFPSKKGT---------GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred CCCCHHHHHhhccc-ccccccCcccccc---------cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 11122221110000 0000000100000 0111122334556789999999999999999999999998
No 322
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.6e-33 Score=301.94 Aligned_cols=237 Identities=24% Similarity=0.410 Sum_probs=189.5
Q ss_pred CeeeeeCCeEEEEEEeCC-C----------cEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 630 TQIGQGGYGKVYKGILPD-G----------TVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+.||+|+||.||+|.+.+ + ..|++|.+...... ...+.+|+.++++++|+||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 468999999999999754 3 25788877654433 5788999999999999999999999987 788999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-------cEEEEeecc
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-------TAKVADFGL 771 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-------~~kl~DfGl 771 (956)
|||+++|+|.+++..... .+++..++.++.||+.||+|||+++ |+||||||+||+++.++ .+||+|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 999999999999976542 5888899999999999999999998 99999999999999888 799999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccC--CCCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHHHhhc
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNIAYQS 848 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~~~~~ 848 (956)
+..... .....++..|+|||++.+. .++.++|||||||++|||++ |..||..... ..... .+.
T Consensus 155 a~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-~~~~~-~~~- 220 (259)
T cd05037 155 PITVLS-----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-SEKER-FYQ- 220 (259)
T ss_pred cccccc-----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-hhHHH-HHh-
Confidence 876432 1123466789999999876 78999999999999999999 5667754432 11111 111
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 849 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
.......+ ....+.+++.+||..+|.+||++.++++.|
T Consensus 221 -------~~~~~~~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 221 -------DQHRLPMP--DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -------cCCCCCCC--CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11111111 127889999999999999999999998875
No 323
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.6e-33 Score=300.45 Aligned_cols=202 Identities=25% Similarity=0.435 Sum_probs=172.2
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC------hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS------LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
+|+..+.||+|++|.||+|.. .+++.||+|.+.... ....+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 478889999999999999985 478999999886432 1124678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccccccC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAP 776 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~~ 776 (956)
||||+++++|.+++... .++++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .+||+|||.+....
T Consensus 81 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 99999999999999754 35788999999999999999999998 99999999999998776 69999999997764
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
..... .........++..|+|||.+.+..++.++||||+|++++||++|+.||..
T Consensus 156 ~~~~~---~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 210 (268)
T cd06630 156 AKGTG---AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNA 210 (268)
T ss_pred ccccc---CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 32111 01112234578899999999888899999999999999999999999864
No 324
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.9e-33 Score=302.33 Aligned_cols=201 Identities=27% Similarity=0.455 Sum_probs=169.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh----------hHHHHHHHHHHHHhcCCCceeeeecccccCC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ----------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG 693 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~ 693 (956)
+|.+.+.||+|+||.||+|... +++.||+|.+...... ..+.+.+|++++++++|+||+++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4777889999999999999854 6899999987532111 1246788999999999999999999999999
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccccc
Confidence 999999999999999999765 35888999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
...... .........|+..|+|||.+.... ++.++||||||+++||+++|..||...
T Consensus 157 ~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~ 215 (272)
T cd06629 157 KSDDIY-----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDE 215 (272)
T ss_pred cccccc-----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCc
Confidence 643211 011123345888999999987654 788999999999999999999999643
No 325
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.1e-33 Score=303.05 Aligned_cols=203 Identities=32% Similarity=0.452 Sum_probs=172.2
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCC------
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEG------ 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~------ 693 (956)
++++|++.+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4689999999999999999999975 578999999875443 346789999999999 6999999999986543
Q ss_pred cEEEEEecCCCCCHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
..++||||+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.+||+|||.
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 4899999999999999987533 456899999999999999999999998 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
+....... .......|+..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 160 ~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 160 SAQLDSTL-------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred ceecccch-------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 87653211 11233458889999998754 34678899999999999999999999643
No 326
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.9e-33 Score=307.72 Aligned_cols=259 Identities=20% Similarity=0.286 Sum_probs=195.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|++.+.||+|+||.||++... +++.||+|.+..... ...+.+.+|+++++.++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888999999999999999965 578999998875432 23457789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999999664 35888999999999999999999998 9999999999999999999999999987422111
Q ss_pred CCCc--------cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 780 IEGI--------VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 780 ~~~~--------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
.... ..........++..|+|||.+.+..++.++|||||||++|||++|..||..... .+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-~~~~~~~~~~--- 231 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-EELFGQVISD--- 231 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhc---
Confidence 0000 000111224578899999999988899999999999999999999999974432 1111111000
Q ss_pred hhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
....+..+...+..+.+++.+|++.+|++||++.++.+.+
T Consensus 232 ----~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 232 ----DIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred ----ccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence 0001111123455667777777777777777654444333
No 327
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=4.3e-33 Score=301.01 Aligned_cols=202 Identities=25% Similarity=0.423 Sum_probs=171.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccccc--CCcEEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE--EGEQMLVY 699 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~--~~~~~LV~ 699 (956)
+|++.+.||.|+||.||++... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++.. ....++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999854 68899999886432 3335678899999999999999999998753 45679999
Q ss_pred ecCCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhh-----hcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 700 EFMSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLH-----TEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 700 e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH-----~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
||+++++|.+++... ...++++..++.++.|++.||.||| +.+ ++|+||||+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999999653 2456899999999999999999999 666 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
....... .......++..|+|||.+.+..++.++||||||+++++|++|+.||....
T Consensus 158 ~~~~~~~-------~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 214 (265)
T cd08217 158 KILGHDS-------SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN 214 (265)
T ss_pred ccccCCc-------ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC
Confidence 8764322 11223458899999999999889999999999999999999999997543
No 328
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=8.6e-34 Score=318.87 Aligned_cols=281 Identities=23% Similarity=0.363 Sum_probs=203.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccC------C
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 693 (956)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... ......+.+|++++++++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 378999999999999999999964 68999999886532 12235678999999999999999999998644 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++|+||+. .+|.++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~ 165 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 165 (342)
T ss_pred eEEEEecccc-cCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence 4699999995 57777652 34788999999999999999999998 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ .....
T Consensus 166 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~-~~~~~------ 228 (342)
T cd07879 166 HADAE----------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQIL------ 228 (342)
T ss_pred CCCCC----------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH------
Confidence 54211 123356788999999876 4688899999999999999999999975433221 11111
Q ss_pred hhccCCCCCCChHHHHHHHHHHH-HhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCC
Q 002178 853 SVIDGNMGSYPSECVEKFIKLAL-KCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~-~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
. ..+...+.....+..... ......|. .|. ..+...++..+....+++.+|++.||++|++++|++
T Consensus 229 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 229 ---K-VTGVPGPEFVQKLEDKAAKSYIKSLPK-YPR--------KDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred ---H-hcCCCCHHHHHHhcccchHHHHhhcCC-ccc--------chHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 0 011111222111111000 00000000 000 011112234455567899999999999999999999
Q ss_pred CCCccccCCC
Q 002178 932 KHPYVSSDVS 941 (956)
Q Consensus 932 ~HP~f~~~~~ 941 (956)
.||||..-..
T Consensus 296 ~h~~f~~~~~ 305 (342)
T cd07879 296 EHPYFDSFRD 305 (342)
T ss_pred cCcchhhccc
Confidence 9999976543
No 329
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2e-33 Score=302.53 Aligned_cols=201 Identities=27% Similarity=0.464 Sum_probs=173.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|+||.||+|... +|..||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788899999999999999975 58899999886532 22345778999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~~~~ 780 (956)
+++++|.+++.......+++..+..++.|+++||.|||+.+ ++|+||||+||++++++ .+||+|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99999999997765556899999999999999999999998 99999999999999885 56999999987654221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||...
T Consensus 157 ------~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 205 (257)
T cd08225 157 ------ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN 205 (257)
T ss_pred ------ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 1122345888999999998888999999999999999999999998643
No 330
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=6.9e-33 Score=299.43 Aligned_cols=201 Identities=30% Similarity=0.429 Sum_probs=176.9
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
++|++.+.||+|++|.||+|... +++.||+|++..... ...+.+.+|++.+++++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888999999999999999976 599999999876544 3457899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
+++++|.+++... ..+++..++.++.|+++|++|||+ .+ ++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999764 458999999999999999999999 88 99999999999999999999999999886543221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
......++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 156 -------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~ 204 (264)
T cd06623 156 -------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPG 204 (264)
T ss_pred -------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 1123457889999999999899999999999999999999999996543
No 331
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-35 Score=295.27 Aligned_cols=201 Identities=26% Similarity=0.368 Sum_probs=177.2
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHH---HHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKE---FLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~---~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|+.+++||+|.||+|-+++-+ .++.+|+|++++.......+ -..|-++|+.-+||.+..+--.|+..+..|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 467788899999999999999854 79999999998765444333 35688999999999999999899999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||..||.|.-++.+. ..+++...+.+-..|+.||.|||+++ ||.||||.+|.|+|.+|.+||+|||+++.-.
T Consensus 247 MeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999988653 45888888899999999999999998 9999999999999999999999999997532
Q ss_pred CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.........+||+.|+|||++....|..++|.|.+||++|||++|+.||...
T Consensus 320 -----~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 320 -----KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred -----cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 2344567789999999999999999999999999999999999999999754
No 332
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.4e-33 Score=304.80 Aligned_cols=199 Identities=28% Similarity=0.439 Sum_probs=168.9
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||+|+||.||++... +|+.||+|.+..... ...+.+.+|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 499999999875443 3456788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC-cccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG-IVPA 786 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~-~~~~ 786 (956)
.+++.... .+++..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++.......... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG--SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99997644 5899999999999999999999998 9999999999999999999999999987643321100 0001
Q ss_pred ceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 787 HVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 787 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......++..|+|||......++.++||||||+++||+++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 204 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGE 204 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 1223445788999999999888999999999999999999999999644
No 333
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.1e-33 Score=316.58 Aligned_cols=290 Identities=25% Similarity=0.367 Sum_probs=212.2
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCC-----cEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG-----EQM 696 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-----~~~ 696 (956)
+|++.+.||+|++|.||+|+.. +++.||+|++.... ....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5888999999999999999975 58999999987643 334567899999999999999999999997765 789
Q ss_pred EEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 697 LVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 697 LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||||++ ++|.+++.... .+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999996 58999886543 6899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCCCccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
..... ........++..|+|||.+.+. .++.++||||||+++|+|++|+.||....... ......
T Consensus 155 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i~--------- 220 (330)
T cd07834 155 PDEDE----KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYID-QLNLIV--------- 220 (330)
T ss_pred ccccc----cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHH---------
Confidence 33210 0112334578899999999887 78999999999999999999999997554321 111110
Q ss_pred cCCCCCCChHHHHHH-HHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCC
Q 002178 856 DGNMGSYPSECVEKF-IKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l-~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
...+..+.+..... ...+.......+..++ . .+....+.......+++.+||..+|++||+++++++||
T Consensus 221 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 221 -EVLGTPSEEDLKFITSEKARNYLKSLPKKPK-K--------PLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred -HhcCCCChhHhhhccccchhhHHhhcccCCc-c--------hhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 00111111111100 0000000000011000 0 01112233445567899999999999999999999999
Q ss_pred ccccCCCCCc
Q 002178 935 YVSSDVSGSN 944 (956)
Q Consensus 935 ~f~~~~~~~~ 944 (956)
||++-...++
T Consensus 291 ~~~~~~~~~~ 300 (330)
T cd07834 291 YLAQLHDPED 300 (330)
T ss_pred cHHhhccccc
Confidence 9976555433
No 334
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.5e-33 Score=306.06 Aligned_cols=200 Identities=26% Similarity=0.432 Sum_probs=175.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
++|.+.+.||+|+||.||+|... +++.||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 68889999999999999999854 68899999987555455567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.+. .+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~--- 169 (293)
T cd06647 99 AGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--- 169 (293)
T ss_pred CCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccc---
Confidence 999999999653 3778899999999999999999999 9999999999999999999999999987553221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......+++.|+|||.+.+..++.++||||||+++||+++|+.||....
T Consensus 170 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~ 219 (293)
T cd06647 170 ----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNEN 219 (293)
T ss_pred ----cccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 11223458889999999988889999999999999999999999997543
No 335
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=334.77 Aligned_cols=209 Identities=27% Similarity=0.319 Sum_probs=182.6
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeeccccc
Q 002178 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 616 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
..++..-.++|++.++||+|+||.|..++.+ ++++||.|++++..+- ...-|..|-.+|..-..+-|+.++-.|++
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 4466667789999999999999999999975 6899999999874332 23567888889999999999999999999
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
+.+.|+|||||+||+|-.++.+.. .+++..++.++..|+-||.-+|+.| +|||||||+|||+|..|++||+|||.
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchh
Confidence 999999999999999999997765 6888889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-----HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
+-.+.... .-.+....|||-|++||++.. +.|+..+|.||+||++|||+.|..||...
T Consensus 222 Clkm~~dG------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad 284 (1317)
T KOG0612|consen 222 CLKMDADG------TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD 284 (1317)
T ss_pred HHhcCCCC------cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH
Confidence 87665332 234456779999999999853 56899999999999999999999999643
No 336
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=306.96 Aligned_cols=292 Identities=21% Similarity=0.292 Sum_probs=208.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC--------CCceeeeeccccc--
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH--------HRNLVSLVGYCDE-- 691 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~nIv~l~~~~~~-- 691 (956)
..+|.+.++||.|.|++||+|.+ ++.+.||+|+.+... ...+..+.|+++|++++ ..+||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 47899999999999999999985 468999999988633 33456788999999984 3479999999954
Q ss_pred --CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC--------
Q 002178 692 --EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-------- 761 (956)
Q Consensus 692 --~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-------- 761 (956)
+.+.|+|+|++ |-+|..+|.....+.++...+++|++||+.||.|||+++. |||-||||+|||+..+
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecg--IIHTDlKPENvLl~~~e~~~~~~~ 232 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECG--IIHTDLKPENVLLCSTEIDPAKDA 232 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcC--ccccCCCcceeeeeccccchhhhh
Confidence 45899999999 8899999998877889999999999999999999999874 9999999999999210
Q ss_pred --------------------------------------------------------------------------------
Q 002178 762 -------------------------------------------------------------------------------- 761 (956)
Q Consensus 762 -------------------------------------------------------------------------------- 761 (956)
T Consensus 233 ~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~~ 312 (590)
T KOG1290|consen 233 REAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRINGN 312 (590)
T ss_pred hhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCcc
Confidence
Q ss_pred ------------------------------------------------------------------------------Cc
Q 002178 762 ------------------------------------------------------------------------------FT 763 (956)
Q Consensus 762 ------------------------------------------------------------------------------~~ 763 (956)
.+
T Consensus 313 ~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di~ 392 (590)
T KOG1290|consen 313 ESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDIR 392 (590)
T ss_pred ccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCcccee
Confidence 01
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--hh-HH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK--NI-VR 840 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~--~~-~~ 840 (956)
+||+|||-|+... ...+.-+.|..|+|||++.+..|+..+||||++|++|||.||...|.... +. .+
T Consensus 393 vKIaDlGNACW~~----------khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD 462 (590)
T KOG1290|consen 393 VKIADLGNACWVH----------KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD 462 (590)
T ss_pred EEEeeccchhhhh----------hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc
Confidence 3444444444321 11233457889999999999999999999999999999999999996421 11 11
Q ss_pred HHHHHhhcccchhhccCCCCCCChHH------HHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccc
Q 002178 841 EVNIAYQSSMMFSVIDGNMGSYPSEC------VEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFIN 914 (956)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~ 914 (956)
....+. +-..++.+|... +.++..---.... -.|-.+--+.+.|.+.++...+...++.+||.
T Consensus 463 EDHiA~--------i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lrh---I~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~ 531 (590)
T KOG1290|consen 463 EDHIAL--------IMELLGKIPRKIALGGKYSRDFFNRRGELRH---IRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLS 531 (590)
T ss_pred HHHHHH--------HHHHHhhccHHHHhcCcchHhhhccccceec---ccccCCCcHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 111110 001112222211 1111110000000 01222223334444555555556677889999
Q ss_pred cccCCCCCCCCCCccCCCCCccccC
Q 002178 915 SEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 915 ~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
.||+++|++|+||.++|+|||+..-
T Consensus 532 PmLef~PeKR~tA~~cl~hPwLn~~ 556 (590)
T KOG1290|consen 532 PMLEFDPEKRPTAAQCLKHPWLNPV 556 (590)
T ss_pred HHHhcCccccccHHHHhcCccccCC
Confidence 9999999999999999999999743
No 337
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.1e-33 Score=306.94 Aligned_cols=278 Identities=26% Similarity=0.401 Sum_probs=208.7
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
|++.+.||+|++|.||+|... +++.+++|.+...... ....+.+|++++++++|+||+++++++..++..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999965 6899999998754332 3567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
+ ++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 81 D-TDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred C-CCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 6 58988886643 46899999999999999999999999 9999999999999999999999999997664321
Q ss_pred ccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||........ ...... ..+.
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~----------~~~~ 217 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFR----------TLGT 217 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHH----------HcCC
Confidence 112234577899999998876 789999999999999999999999976544322 111110 0111
Q ss_pred CChHHHHHHHHHHHHhcccCCCCC-CCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 862 YPSECVEKFIKLALKCCQDETDAR-PSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~R-Ps~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
...+....+.+.+..+....|... ....++. +..+....+|+.+|+..||.+||+++|++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 218 PDPEVWPKFTSLARNYKFSFPKKAGMPLPKLF----------PNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred CchHhcccchhhhhhhhhhhccccccCHHHhh----------hhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 111222222222222211112211 1221111 2234455689999999999999999999999997
No 338
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.5e-33 Score=314.39 Aligned_cols=292 Identities=25% Similarity=0.339 Sum_probs=207.3
Q ss_pred hcCCCC-CCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh--------------HHHHHHHHHHHHhcCCCceeeee
Q 002178 623 TNNFNS-STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG--------------EKEFLTEIQFLSRLHHRNLVSLV 686 (956)
Q Consensus 623 ~~~y~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~nIv~l~ 686 (956)
.++|.. .+.||+|+||+||+|... +++.||||.+....... ...+.+|++++++++|+||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 346654 467999999999999965 68999999886432221 12577899999999999999999
Q ss_pred cccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEE
Q 002178 687 GYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKV 766 (956)
Q Consensus 687 ~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl 766 (956)
+++..++..++||||++ |+|.+++... ..+++.....++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEE
Confidence 99999999999999996 6999998653 34888999999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCCCc-------cccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchh
Q 002178 767 ADFGLSRLAPVPDIEGI-------VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNI 838 (956)
Q Consensus 767 ~DfGla~~~~~~~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~ 838 (956)
+|||++........... ..........++..|+|||.+.+. .++.++|||||||++|||++|+.||....+.
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999976542111000 001111223467889999998764 4688999999999999999999999755432
Q ss_pred HHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccC
Q 002178 839 VREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHT 918 (956)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~ 918 (956)
.. ...... .. +..+...+.....+... ....+...+... ...+.......+++.+|+.
T Consensus 241 ~~-~~~i~~------~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~ 298 (335)
T PTZ00024 241 DQ-LGRIFE------LL----GTPNEDNWPQAKKLPLY-TEFTPRKPKDLK----------TIFPNASDDAIDLLQSLLK 298 (335)
T ss_pred HH-HHHHHH------Hh----CCCchhhCcchhhcccc-cccCcCCcccHH----------HhCcCCChHHHHHHHHHcC
Confidence 21 111100 00 00000000000000000 000111111111 1123334556789999999
Q ss_pred CCCCCCCCCccCCCCCccccCCCC
Q 002178 919 SKEETPPSSSSMLKHPYVSSDVSG 942 (956)
Q Consensus 919 ~dP~~R~sa~e~L~HP~f~~~~~~ 942 (956)
.||++|++++|+|.||||+.+..-
T Consensus 299 ~~P~~R~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 299 LNPLERISAKEALKHEYFKSDPLP 322 (335)
T ss_pred CCchhccCHHHHhcCcccCCCCCC
Confidence 999999999999999999987664
No 339
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.6e-33 Score=304.33 Aligned_cols=279 Identities=27% Similarity=0.386 Sum_probs=205.0
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEecC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
|++.+.||+|++|+||+|+.. +++.||+|++..... .......+|+..+++++ |+||+++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567889999999999999975 588999998875432 22334567999999999 999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
+|+|.+++.......+++..+..++.|++.||.|||+.+ ++|+||+|+||++++++.++|+|||.+.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~--- 153 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP--- 153 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC---
Confidence 889999997765556899999999999999999999998 9999999999999999999999999997653221
Q ss_pred ccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
......++..|+|||++.+ ..++.++||||||++++||++|+.||............. .. .+.
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~-------~~----~~~ 217 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKIC-------SV----LGT 217 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHH-------Hh----cCC
Confidence 1123457889999998854 557899999999999999999999986543322111100 00 111
Q ss_pred CChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 862 YPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 862 ~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
...+....-..+.. .+...-..++.. . + ....+.......+++++|++.||++||+++|++.||||
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~~-~----~---~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 218 PTKQDWPEGYKLAS-KLGFRFPQFAPT-S----L---HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred CChhhhhhHhhhhc-cccccccccccc-c----H---HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 11111111111110 111100000000 0 0 11223334556789999999999999999999999997
No 340
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.3e-33 Score=306.04 Aligned_cols=207 Identities=25% Similarity=0.372 Sum_probs=176.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV 698 (956)
++|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47888999999999999999965 68999999987532 233467889999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||+++++|.+++.... .+++..++.++.|++.||.|||+.+ ++|+||||+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999997653 5899999999999999999999999 999999999999999999999999999876433
Q ss_pred CCCCcc-------------ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 779 DIEGIV-------------PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 779 ~~~~~~-------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
...... .........++..|+|||...+..++.++||||||++++|+++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 225 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGS 225 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCc
Confidence 211000 011223345788999999998888999999999999999999999999754
No 341
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=9.4e-33 Score=302.42 Aligned_cols=276 Identities=26% Similarity=0.380 Sum_probs=199.7
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhc---CCCceeeeecccccCCc-----
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRL---HHRNLVSLVGYCDEEGE----- 694 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l---~h~nIv~l~~~~~~~~~----- 694 (956)
|++.+.||+|+||.||+|+.+ +++.||+|++...... ....+.+|+.+++++ .|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999976 4899999998743221 234566788777666 59999999999987766
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.+++|||+. ++|.+++.......+++..++.++.|+++||.|||+.+ ++|+||+|+||+++.++.+||+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCccee
Confidence 999999996 58999987655556899999999999999999999998 99999999999999999999999999977
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
..... ......++..|+|||++.+..++.++|||||||++|||++|+.||..... .+...........
T Consensus 157 ~~~~~--------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~--- 224 (287)
T cd07838 157 YSFEM--------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGL--- 224 (287)
T ss_pred ccCCc--------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCC---
Confidence 64321 11223467899999999998999999999999999999999888865432 2222211110000
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCC
Q 002178 855 IDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHP 934 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP 934 (956)
......+.. ......+....+. +.+.++. ++......+++.+|+..||++||+++|+++||
T Consensus 225 --~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~----------~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~ 285 (287)
T cd07838 225 --PSEEEWPRN-----VSLPRSSFPSYTP--RSFKSFV----------PEICEEGLDLLKKMLTFNPHKRISAFEALQHP 285 (287)
T ss_pred --CChHhcCCC-----cccchhhcccccc--cchhhhh----------hhhhHHHHHHHHHHhccCCccCCCHHHHhcCc
Confidence 000000000 0000000100010 1111111 12233445799999999999999999999999
Q ss_pred cc
Q 002178 935 YV 936 (956)
Q Consensus 935 ~f 936 (956)
||
T Consensus 286 ~~ 287 (287)
T cd07838 286 YF 287 (287)
T ss_pred CC
Confidence 97
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2e-33 Score=315.30 Aligned_cols=284 Identities=25% Similarity=0.376 Sum_probs=207.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC-----Cc
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GE 694 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~ 694 (956)
.++|.+.+.||+|+||+||+|... +++.||||.+... .......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457999999999999999999964 6899999988653 222345677899999999999999999988543 35
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++||||+. ++|.+++... ..+++..+..++.|++.||.|||+++ ++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 7999988654 35889999999999999999999998 99999999999999999999999999986
Q ss_pred cCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
..... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... ....... .
T Consensus 158 ~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~------~ 223 (337)
T cd07858 158 TSEKG-------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLIT------E 223 (337)
T ss_pred cCCCc-------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHH------H
Confidence 54221 11223457889999998865 46889999999999999999999999654321 1111100 0
Q ss_pred hccCCCCCCChHHHH-----HHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCc
Q 002178 854 VIDGNMGSYPSECVE-----KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~-----~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
.. +..+.+... ...+.+. ......++... ...+...+...+++++||+.||++|||++
T Consensus 224 ~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~P~~Rps~~ 286 (337)
T cd07858 224 LL----GSPSEEDLGFIRNEKARRYIR---SLPYTPRQSFA----------RLFPHANPLAIDLLEKMLVFDPSKRITVE 286 (337)
T ss_pred Hh----CCCChHHhhhcCchhhhHHHH---hcCcccccCHH----------HHcccCCHHHHHHHHHHhcCChhhccCHH
Confidence 00 111111000 0000000 00011112211 11233445567899999999999999999
Q ss_pred cCCCCCccccCCCCC
Q 002178 929 SMLKHPYVSSDVSGS 943 (956)
Q Consensus 929 e~L~HP~f~~~~~~~ 943 (956)
|+++||||......+
T Consensus 287 ell~h~~~~~~~~~~ 301 (337)
T cd07858 287 EALAHPYLASLHDPS 301 (337)
T ss_pred HHHcCcchhhhcCcc
Confidence 999999997655443
No 343
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-35 Score=341.79 Aligned_cols=255 Identities=27% Similarity=0.390 Sum_probs=208.5
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.+-+++...+||.|.||.||.|. ..+|...|+|-++... ....+.+.+|+.++..++|||+|+++|+-.+.+..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 35677788999999999999999 4579999999776432 22345678899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||||++|+|.+.+.... ..++.....+..|++.|++|||++| ||||||||.||+++.+|.+|++|||.|......
T Consensus 1313 MEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 99999999999996533 3677777889999999999999999 999999999999999999999999999877543
Q ss_pred CCCCccccceecccccCCCcccccccccC---CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
- ...+ .......||+.|||||++.+. ...-+.||||+||++.||.||++||..-++.. ..++.+-
T Consensus 1388 ~--~~~~-~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~---------aIMy~V~ 1455 (1509)
T KOG4645|consen 1388 A--QTMP-GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEW---------AIMYHVA 1455 (1509)
T ss_pred h--hcCC-HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchh---------HHHhHHh
Confidence 1 1111 223456799999999999763 35668999999999999999999997544322 2344555
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.+..+++|+..+.+-.+++..|+..||.+|.++.|+++
T Consensus 1456 ~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1456 AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 66677888888888888888999888888866665543
No 344
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.2e-32 Score=301.58 Aligned_cols=203 Identities=28% Similarity=0.437 Sum_probs=177.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
.++.|+..+.||+|++|.||+|.++ +++.|++|++..... ..+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999976 689999999876544 45678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+++++|.+++.... ..+++..+..++.|++.||+|||+.+ |+|+||+|+||+++.++.++|+|||.+.......
T Consensus 96 ~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~- 170 (286)
T cd06614 96 YMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK- 170 (286)
T ss_pred ccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch-
Confidence 999999999997754 46899999999999999999999988 9999999999999999999999999987543221
Q ss_pred CCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.......++..|+|||.+.+..++.++||||||+++|||++|+.||....
T Consensus 171 ------~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~ 220 (286)
T cd06614 171 ------SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREP 220 (286)
T ss_pred ------hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCC
Confidence 11223457889999999998889999999999999999999999987543
No 345
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.7e-33 Score=305.55 Aligned_cols=199 Identities=27% Similarity=0.365 Sum_probs=168.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEe----CCCcEEEEEEecCCCh----hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcE
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 695 (956)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ...+.+.+|+++++++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 3689999999875322 2235678899999999 599999999999988899
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++++|.+++... ..+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.+||+|||++...
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 9999999999999999764 35788889999999999999999998 999999999999999999999999999765
Q ss_pred CCCCCCCccccceecccccCCCcccccccccC--CCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--KLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
..... .......|+..|+|||.+.+. .++.++||||||+++|||++|+.||..
T Consensus 156 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~ 210 (290)
T cd05613 156 HEDEV------ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210 (290)
T ss_pred ccccc------cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCc
Confidence 32211 111234588899999998753 467899999999999999999999853
No 346
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.1e-33 Score=308.82 Aligned_cols=277 Identities=28% Similarity=0.422 Sum_probs=206.3
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
|+..+.||+|++|.||+|+.. +++.||+|.+.... ....+.+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 566788999999999999965 58999999987643 223457788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
+ ++|.+++.... ..+++..++.++.|+++||+|||+.+ |+||||+|+||++++++.+||+|||.++......
T Consensus 81 ~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~--- 152 (282)
T cd07829 81 D-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPL--- 152 (282)
T ss_pred C-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCc---
Confidence 7 69999997653 35899999999999999999999998 9999999999999999999999999997654321
Q ss_pred ccccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS 861 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (956)
.......++..|+|||.+.+. .++.++|||||||++||+++|+.||........ ...... ....
T Consensus 153 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~-~~~~~~----------~~~~ 217 (282)
T cd07829 153 ----RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQ-LFKIFQ----------ILGT 217 (282)
T ss_pred ----cccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH-HHHHHH----------HhCC
Confidence 112223456789999998776 789999999999999999999988865443221 111100 0111
Q ss_pred CChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc
Q 002178 862 YPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV 936 (956)
Q Consensus 862 ~~~~~~~~l~~l~-~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f 936 (956)
..+..+..+.++. ..+..+....++ ....++..+....+++++|+..||++||++++++.||||
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 218 PTEESWPGVTKLPDYKPTFPKFPPKD-----------LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred CcHHHHHhhcccccccccccccCccc-----------hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 1122222221111 000000000000 012233335556789999999999999999999999998
No 347
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=8.5e-33 Score=301.30 Aligned_cols=198 Identities=29% Similarity=0.470 Sum_probs=170.7
Q ss_pred CCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcC---CCceeeeecccccCCcEEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.|+..+.||+|+||.||+|.+ .+++.||+|.+.... ....+++.+|++++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477888999999999999996 478999999986542 233467889999999997 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++... .+++..++.++.|++.||.|||+.+ |+|+||+|+||++++++.++|+|||++.......
T Consensus 82 e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998653 5889999999999999999999999 9999999999999999999999999998764322
Q ss_pred CCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||...
T Consensus 156 -------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~ 205 (277)
T cd06917 156 -------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDV 205 (277)
T ss_pred -------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCC
Confidence 11223458889999999875 45688999999999999999999999643
No 348
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.2e-32 Score=300.15 Aligned_cols=246 Identities=26% Similarity=0.419 Sum_probs=196.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
-|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++|+||+++++++..++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 4677889999999999999864 68999999876433 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
++++|.+++.. ..+++..+..++.|++.|+.|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~--- 155 (277)
T cd06641 85 GGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--- 155 (277)
T ss_pred CCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch---
Confidence 99999999864 34789999999999999999999998 9999999999999999999999999987654221
Q ss_pred ccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSY 862 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (956)
.......++..|+|||.+.+..++.++|||||||++|||++|..||...... ..... +........
T Consensus 156 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~---------~~~~~~~~~ 221 (277)
T cd06641 156 ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-KVLFL---------IPKNNPPTL 221 (277)
T ss_pred ----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-HHHHH---------HhcCCCCCC
Confidence 1112345788999999998888899999999999999999999998643321 11111 111112223
Q ss_pred ChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 863 PSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 863 ~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
+..++..+.+++.+|++.+|.+||++.++++
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 222 EGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 4445566777777787777777777777776
No 349
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.6e-32 Score=302.30 Aligned_cols=245 Identities=30% Similarity=0.465 Sum_probs=191.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
.++|+..+.||+|+||+||+|... +++.||+|.+.... ....+++.+|+++++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888999999999999999965 68999999886432 22345788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||++ |++.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~-~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 94 MEYCL-GSASDILEVHK-KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HHhhC-CCHHHHHHHcc-cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 99996 68888775432 35899999999999999999999998 999999999999999999999999998754321
Q ss_pred CCCCccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
....++..|+|||++. ...++.++||||||+++|||++|+.||............ .
T Consensus 169 -----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~----------~ 227 (307)
T cd06607 169 -----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----------A 227 (307)
T ss_pred -----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH----------h
Confidence 1235778999999984 356888999999999999999999999754432221111 1
Q ss_pred cCCCCC-CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 856 DGNMGS-YPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 856 ~~~~~~-~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
...... .+..++..+.+++.+||+.+|++||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 228 QNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred cCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111111 12345556666677777766666666666654
No 350
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=7.9e-33 Score=310.59 Aligned_cols=290 Identities=26% Similarity=0.395 Sum_probs=208.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhc-CCCceeeeecccccC--CcE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEE--GEQ 695 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~--~~~ 695 (956)
..++|++.+.||+|+||.||+|.+. +++.||+|++... .......+.+|+.+++++ +|+||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567888999999999999999975 6889999987542 223345677899999999 999999999998643 368
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||++ ++|.+++... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 85 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 6999988654 5788899999999999999999998 999999999999999999999999999866
Q ss_pred CCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhh
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSV 854 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 854 (956)
....... .........|+..|+|||.+.+ ..++.++||||||+++|||++|+.||........ ......
T Consensus 158 ~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~------- 227 (337)
T cd07852 158 SELEENP--ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIE------- 227 (337)
T ss_pred ccccccc--cCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHH-------
Confidence 4322110 0112233468899999998865 4578899999999999999999999965433221 111100
Q ss_pred ccCCCCCCChHHHHHHH-HHHHHhcccCC-CCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 855 IDGNMGSYPSECVEKFI-KLALKCCQDET-DARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 855 ~~~~~~~~~~~~~~~l~-~l~~~c~~~~p-~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
..+..+.+....+. .....++...+ ..++.+.+ ..+.......+++.+|++.||++|||+.++++
T Consensus 228 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 228 ---VIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDE----------LLPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred ---HhCCCCHHHHHHHHhhhHHHhhhhcccccccchhh----------hccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00111222222111 11111111111 11122211 12333455568999999999999999999999
Q ss_pred CCccccCCC
Q 002178 933 HPYVSSDVS 941 (956)
Q Consensus 933 HP~f~~~~~ 941 (956)
||||+....
T Consensus 295 ~~~~~~~~~ 303 (337)
T cd07852 295 HPYVAQFHN 303 (337)
T ss_pred Chhhhhhcc
Confidence 999966543
No 351
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.3e-33 Score=308.17 Aligned_cols=252 Identities=22% Similarity=0.385 Sum_probs=197.7
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHH
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLR 708 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~ 708 (956)
.+||+|+||.||++... +++.||+|.+..........+.+|+.+++.++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 56999999999999864 78999999987555555667899999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccce
Q 002178 709 DQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHV 788 (956)
Q Consensus 709 ~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~ 788 (956)
+++... .+++.....++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++....... ..
T Consensus 106 ~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-------~~ 172 (292)
T cd06657 106 DIVTHT---RMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-------PR 172 (292)
T ss_pred HHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc-------cc
Confidence 987542 4788899999999999999999998 9999999999999999999999999987543211 11
Q ss_pred ecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHH
Q 002178 789 STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVE 868 (956)
Q Consensus 789 ~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (956)
.....|+..|+|||.+.+..++.++||||||+++|||++|..||...... +...
T Consensus 173 ~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-~~~~------------------------- 226 (292)
T cd06657 173 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMK------------------------- 226 (292)
T ss_pred ccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH-------------------------
Confidence 22345788999999998888899999999999999999999998643221 1000
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 869 KFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 869 ~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
.+..++.... + ..........+++.+|+..||.+|++++++++||||.....
T Consensus 227 ----~~~~~~~~~~---~--------------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 227 ----MIRDNLPPKL---K--------------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred ----HHHhhCCccc---C--------------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 0000000000 0 00011112235677888888999999999999999876665
No 352
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-33 Score=280.09 Aligned_cols=249 Identities=24% Similarity=0.407 Sum_probs=198.8
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC-ChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-SLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+.+.+..||.|..|.||++..+ .|..+|||.+... +.+..++++..+.++..-+ +|.||+.+|||..+...++.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3444667999999999999976 5899999998764 3444577888888766654 89999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
| .-..+.++++ -..++++...-++...+.+||.||.+++. |+|||+||+|||+|+.|++|++|||++-.+..
T Consensus 173 M-s~C~ekLlkr-ik~piPE~ilGk~tva~v~AL~YLKeKH~--viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---- 244 (391)
T KOG0983|consen 173 M-STCAEKLLKR-IKGPIPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGNIKLCDFGISGRLVD---- 244 (391)
T ss_pred H-HHHHHHHHHH-hcCCchHHhhhhhHHHHHHHHHHHHHhcc--eeecccCccceEEccCCCEEeecccccceeec----
Confidence 8 3455555544 45679999999999999999999998764 99999999999999999999999999976542
Q ss_pred CccccceecccccCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
+...+...|.+.|||||.+.- ..|+.++||||||+.++|+.||+.||...+...+.+. .+++..
T Consensus 245 ----SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~lt---------kvln~e 311 (391)
T KOG0983|consen 245 ----SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLT---------KVLNEE 311 (391)
T ss_pred ----ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHH---------HHHhcC
Confidence 233455679999999999964 4688899999999999999999999986544333222 223323
Q ss_pred CCCC--ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 859 MGSY--PSECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 859 ~~~~--~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.+.. ...++..+.+++..|+.+|+.+||...++++.
T Consensus 312 PP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 312 PPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 3322 23478899999999999999999999888753
No 353
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.2e-33 Score=311.93 Aligned_cols=281 Identities=23% Similarity=0.362 Sum_probs=206.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCC-----
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEG----- 693 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~----- 693 (956)
..++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 4678999999999999999999854 78999999986432 223456889999999999999999999886543
Q ss_pred -cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 694 -EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 694 -~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
..++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~ 165 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 165 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccc
Confidence 458999999 7899988853 35889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
...... .....++..|+|||.+.+ ..++.++||||+||++|++++|+.||............ ..
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~-~~---- 230 (343)
T cd07880 166 RQTDSE----------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEI-MK---- 230 (343)
T ss_pred cccccC----------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HH----
Confidence 764321 122356889999999876 45888999999999999999999999755432211111 00
Q ss_pred hhhccCCCCCCChHHHHHHHHH-HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccC
Q 002178 852 FSVIDGNMGSYPSECVEKFIKL-ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSM 930 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l-~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~ 930 (956)
.....+.+....+..- ...-...-|..++. + +....+.......+++.+||..||++|+|+.++
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~ 295 (343)
T cd07880 231 ------VTGTPSKEFVQKLQSEDAKNYVKKLPRFRKK--D-------FRSLLPNANPLAVNVLEKMLVLDAESRITAAEA 295 (343)
T ss_pred ------hcCCCCHHHHHhhcchhHHHHHHhccccCcc--h-------HHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence 0011122222221110 00000001111111 0 111223444556789999999999999999999
Q ss_pred CCCCccccC
Q 002178 931 LKHPYVSSD 939 (956)
Q Consensus 931 L~HP~f~~~ 939 (956)
++||||+..
T Consensus 296 l~~~~~~~~ 304 (343)
T cd07880 296 LAHPYFEEF 304 (343)
T ss_pred hcCccHhhh
Confidence 999999764
No 354
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=3.2e-33 Score=314.34 Aligned_cols=281 Identities=22% Similarity=0.351 Sum_probs=207.6
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCc----
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGE---- 694 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~---- 694 (956)
..++|++.+.||+|++|.||+|... +++.||+|++.... ....+.+.+|+.++++++|+||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3578999999999999999999975 58899999886432 2234567889999999999999999998866554
Q ss_pred --EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccc
Q 002178 695 --QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLS 772 (956)
Q Consensus 695 --~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla 772 (956)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||+|||+.+ |+||||||+||++++++.+||+|||++
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999999 6799999864 35899999999999999999999998 999999999999999999999999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMM 851 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~ 851 (956)
...... .....++..|+|||.+.+ ..++.++|||||||++||+++|+.||...... ..+.....
T Consensus 166 ~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~---- 230 (343)
T cd07851 166 RHTDDE----------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMN---- 230 (343)
T ss_pred cccccc----------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH----
Confidence 765321 123357788999999865 46788999999999999999999999755432 22211110
Q ss_pred hhhccCCCCCCChHHHHHHHHHH--HHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 852 FSVIDGNMGSYPSECVEKFIKLA--LKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 852 ~~~~~~~~~~~~~~~~~~l~~l~--~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
..+..++.....+..-. ..+.......++...++ .+..+....+++++||..||++|||++|
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~s~~l~dli~~~l~~~P~~Rpt~~e 294 (343)
T cd07851 231 ------LVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEV----------FSGANPLAIDLLEKMLVLDPDKRITAAE 294 (343)
T ss_pred ------hcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHH----------hccCCHHHHHHHHHhCCCChhhCCCHHH
Confidence 01112222222111000 00000011112222211 1223455678999999999999999999
Q ss_pred CCCCCccccCC
Q 002178 930 MLKHPYVSSDV 940 (956)
Q Consensus 930 ~L~HP~f~~~~ 940 (956)
+++||||..-.
T Consensus 295 ll~h~~~~~~~ 305 (343)
T cd07851 295 ALAHPYLAEYH 305 (343)
T ss_pred HhcCCCccccC
Confidence 99999996543
No 355
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.2e-33 Score=302.58 Aligned_cols=191 Identities=27% Similarity=0.383 Sum_probs=158.8
Q ss_pred eeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHH---HHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 631 QIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQ---FLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~---~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
.||+|+||.||+|... +++.||+|.+...... ....+..|.. .++...||+|+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 6899999988653322 1223444443 4445579999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|+|.+++... ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 81 GGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 99999988653 35899999999999999999999998 9999999999999999999999999987543211
Q ss_pred cccceecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||...
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~ 199 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH 199 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence 1234588999999999754 6889999999999999999999999643
No 356
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.8e-32 Score=292.27 Aligned_cols=202 Identities=29% Similarity=0.449 Sum_probs=176.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccC--CcEEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQMLVY 699 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~~LV~ 699 (956)
+|+..+.||+|++|.||+|... +++.|++|++..... ...+.+.+|++++++++|+||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999976 689999999876443 4456889999999999999999999999887 8899999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+++++|.+++.... .+++..++.++.|+++||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999997654 6899999999999999999999988 9999999999999999999999999998765332
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.. .......++..|+|||.+.+..++.++||||||+++++|++|+.||....
T Consensus 156 ~~-----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 207 (260)
T cd06606 156 TG-----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG 207 (260)
T ss_pred cc-----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 10 01234568889999999998889999999999999999999999997654
No 357
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=287.29 Aligned_cols=282 Identities=24% Similarity=0.354 Sum_probs=214.2
Q ss_pred CCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC-----CcEEEEE
Q 002178 628 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE-----GEQMLVY 699 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~-----~~~~LV~ 699 (956)
..+.||.|+||.||...+. +|+.||.|++... +....+.+.+|++++..++|.|++..++..+.. .++|.|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 4578999999999999964 7999999988642 334567899999999999999999998876543 3678899
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|.|. .+|...+- +.+.++.+.++-+..||++||.|||+.+ |.||||||.|.|++++...||+|||+|+..+..+
T Consensus 137 ELmQ-SDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHH-hhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhh
Confidence 9984 57877773 3556888889999999999999999999 9999999999999999999999999999765443
Q ss_pred CCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
....+...-|..|+|||.+++ ..|+.+.||||.||++.|++.++..|..... .++.+. +...
T Consensus 211 ------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P-iqQL~l----------ItdL 273 (449)
T KOG0664|consen 211 ------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP-IEQLQM----------IIDL 273 (449)
T ss_pred ------hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh-HHHHHH----------HHHH
Confidence 334455667889999999998 5699999999999999999988777765433 333222 2223
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccc
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVS 937 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~ 937 (956)
++....+.+..-.+-++.-+-..+.+-|+..-+.. |. .......++.+++..|+.+||++|++.++++.|+|..
T Consensus 274 LGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYt-ls----S~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 274 LGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYK-IA----SPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred hCCCcHHHHHHHhhhhHHHhhccCCCCCCccceee-ec----CCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 44444555554444444444444555565543221 11 1112334457899999999999999999999999963
No 358
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.3e-32 Score=296.75 Aligned_cols=190 Identities=27% Similarity=0.367 Sum_probs=160.5
Q ss_pred CeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhh---HHHHHHHHHH-HHhcCCCceeeeecccccCCcEEEEEecCCC
Q 002178 630 TQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQG---EKEFLTEIQF-LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSN 704 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~E~~~-l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~ 704 (956)
+.||+|+||.||+|... +++.||+|.+....... ...+..|..+ ....+|+|++++++++...+..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46899999999999964 68999999987543222 2334455544 3455899999999999999999999999999
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
++|.+++... ..+++..+..++.|+++||.|||+.+ ++||||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 82 GDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred CCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 9999999754 35788889999999999999999998 99999999999999999999999999875421
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.....++..|+|||.+.+..++.++||||||+++|||++|..||...
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 196 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAE 196 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCC
Confidence 12335788999999998888899999999999999999999999643
No 359
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.8e-32 Score=350.00 Aligned_cols=298 Identities=30% Similarity=0.515 Sum_probs=269.5
Q ss_pred ceeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeec
Q 002178 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|+|++|.+.+.+|..+.++++|++|+|++|.+++.+|..+.++++|++|+|++|.+++.+|..+..+++|+.|+|
T Consensus 260 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L 339 (968)
T PLN00113 260 KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQL 339 (968)
T ss_pred CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEEC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCC
Q 002178 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
++|.+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++
T Consensus 340 ~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~- 418 (968)
T PLN00113 340 WSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSG- 418 (968)
T ss_pred cCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeee-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCcccccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCC
Q 002178 242 TIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
.+|..|.++++|+.|+|++|.+++..+. +..+++|+.|+|++|++.+.+|......+|+.|+|++|++++..|..|.++
T Consensus 419 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l 498 (968)
T PLN00113 419 ELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSL 498 (968)
T ss_pred ECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhh
Confidence 6888999999999999999999987764 778899999999999999888887766789999999999998899889999
Q ss_pred CcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCC-CCCC-CCCCCcEEEecCCccc
Q 002178 321 PRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI-SGSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l-~~~~-~~~~l~~l~l~~Np~~ 385 (956)
++|+.|+|++|++.+.+|..+..+.+ |+.|+|++|++++. |..+ .++.++.|+|++|.+.
T Consensus 499 ~~L~~L~Ls~N~l~~~~p~~~~~l~~-----L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 560 (968)
T PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKK-----LVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLS 560 (968)
T ss_pred hccCEEECcCCcceeeCChHHcCccC-----CCEEECCCCcccccCChhHhCcccCCEEECCCCccc
Confidence 99999999999999888888765544 55888898888864 4444 5788888888888764
No 360
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.5e-32 Score=290.39 Aligned_cols=199 Identities=34% Similarity=0.515 Sum_probs=176.6
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
.|+..+.||+|++|.||++... +++.+++|++........+.+.+|++++++++|+||+++++++......++|+||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3777899999999999999975 689999999987655556789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++.... ..+++..+..++.|+++||.|||+.+ ++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 999999987643 46899999999999999999999988 99999999999999999999999999876543210
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.....++..|+|||.+.+..++.++||||||+++++|++|+.||...
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 200 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSEL 200 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCC
Confidence 23446788999999999888999999999999999999999999754
No 361
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-32 Score=301.89 Aligned_cols=199 Identities=29% Similarity=0.412 Sum_probs=165.1
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++.++. |+||+++++++..++..++||||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999965 68999999987533 234567889999999996 99999999999988999999999
Q ss_pred CCCCCHHHHH---hhcCCCCchhHHHHHHHHHHHHHHHHhhhc-CCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 702 MSNGTLRDQL---SAKSKEPLGFAMRLSIALGSSRGILYLHTE-ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 702 ~~~gsL~~~l---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
+. +++.++. .......+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 5665543 333345689999999999999999999975 6 99999999999999999999999999976532
Q ss_pred CCCCCccccceecccccCCCcccccccccC---CCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH---KLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.. ......|+..|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 161 ~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 213 (288)
T cd06616 161 SI--------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKW 213 (288)
T ss_pred CC--------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhc
Confidence 21 11233578899999999776 6889999999999999999999999643
No 362
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.4e-32 Score=293.71 Aligned_cols=201 Identities=30% Similarity=0.514 Sum_probs=176.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|+||.||++... +++.||+|++..... ...+.+.+|+++++.++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999975 689999999876433 4456788999999999999999999999888999999999
Q ss_pred CCCCCHHHHHhhcC--CCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 702 MSNGTLRDQLSAKS--KEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
+++++|.+++.... ...+++..+..++.++++||.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997643 357899999999999999999999998 9999999999999999999999999997654321
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......|++.|+|||...+..++.++||||+|+++++|++|+.||...
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 206 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGE 206 (258)
T ss_pred -------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCC
Confidence 1223345888999999999888999999999999999999999998654
No 363
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=5.2e-32 Score=290.68 Aligned_cols=200 Identities=32% Similarity=0.521 Sum_probs=175.4
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh--hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL--QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.+.||+|++|.||+|... +++.|++|.+..... ...+.+.+|++++++++|+|++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 5788899999999999999865 688999999876543 3456789999999999999999999999988999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (254)
T cd06627 81 AENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK- 154 (254)
T ss_pred CCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc-
Confidence 9999999999765 45899999999999999999999998 99999999999999999999999999987643221
Q ss_pred CccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
......++..|+|||...+..++.++||||+|+++|+|++|+.||....
T Consensus 155 ------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~ 203 (254)
T cd06627 155 ------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN 203 (254)
T ss_pred ------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc
Confidence 1233457889999999988888999999999999999999999996543
No 364
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=2.9e-32 Score=299.72 Aligned_cols=264 Identities=14% Similarity=0.159 Sum_probs=187.9
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC----CcEEEEEEecCCChh--hH---------HHHHHHHHHHHhcCCCceeeeec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD----GTVVAVKRAQEGSLQ--GE---------KEFLTEIQFLSRLHHRNLVSLVG 687 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~--~~---------~~~~~E~~~l~~l~h~nIv~l~~ 687 (956)
.++|++.+.||+|+||+||+|...+ +..+|+|+....... .+ .....+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999999653 456677754322211 11 11223344556678999999998
Q ss_pred ccccCC----cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 688 YCDEEG----EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 688 ~~~~~~----~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
++.... ..++++|++ ..++.+.+.... ..++..+..++.|++.||+|||+.+ |+||||||+|||++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKL-VENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehh-ccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCc
Confidence 765433 447888887 457777775432 3567788899999999999999998 999999999999999999
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVN 843 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~ 843 (956)
+||+|||+|+....................||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 99999999987643221110011112334699999999999999999999999999999999999999975432211111
Q ss_pred HHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 002178 844 IAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMREL 895 (956)
Q Consensus 844 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L 895 (956)
... ......+..+.. ....++..+.+++..|++.+|++||+++++.+.+
T Consensus 245 ~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAK-CDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhH-HHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 100 000111111111 1233467899999999999999999999998765
No 365
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=284.10 Aligned_cols=246 Identities=25% Similarity=0.390 Sum_probs=198.1
Q ss_pred CCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh-hhHHHHHHHHHHH-HhcCCCceeeeecccccCCcEEEEEecCCCC
Q 002178 629 STQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL-QGEKEFLTEIQFL-SRLHHRNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l-~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
...||.|+||+|+|-.++ .|+..|||++..... ...++++.|.+.. +.-++||||+++|.+..++..++.||.| ..
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DI 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hh
Confidence 457999999999998865 699999999987655 4567889998854 4457999999999999999999999999 56
Q ss_pred CHHHHHh---hcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCC
Q 002178 706 TLRDQLS---AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEG 782 (956)
Q Consensus 706 sL~~~l~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 782 (956)
||+.+.. ...+..+++...-+|+.....||.||-+.. .|||||+||+|||++..|.+||+|||.+-.+.
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv------ 219 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLV------ 219 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHH------
Confidence 7766543 334456888888899999999999998765 49999999999999999999999999986543
Q ss_pred ccccceecccccCCCccccccccc--CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCC
Q 002178 783 IVPAHVSTVVKGTPGYLDPEYFLT--HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMG 860 (956)
Q Consensus 783 ~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 860 (956)
.+-..+...|...|||||.+.. ..|+.+|||||+|++|||+.||+.|+....+..+++... ..+..+
T Consensus 220 --~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~V---------v~gdpp 288 (361)
T KOG1006|consen 220 --DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQV---------VIGDPP 288 (361)
T ss_pred --HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHH---------HcCCCC
Confidence 1223455678899999999964 458999999999999999999999998766655554432 222222
Q ss_pred --CCCh---HHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 861 --SYPS---ECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 861 --~~~~---~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.++. ++...+...+..|+-++-..||++.++.+.
T Consensus 289 ~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 289 ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2233 367789999999999999999999988753
No 366
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-34 Score=298.90 Aligned_cols=274 Identities=24% Similarity=0.384 Sum_probs=210.4
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCC-Chhh------HHHHHHHHHHHHhcCCCceeeeeccc
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQG------EKEFLTEIQFLSRLHHRNLVSLVGYC 689 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~------~~~~~~E~~~l~~l~h~nIv~l~~~~ 689 (956)
|-....++|-.++.||+|||+.||||.+ ...+.||||+-... +... .+...+|.++.+.+.||.||++|+||
T Consensus 457 DHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf 536 (775)
T KOG1151|consen 457 DHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF 536 (775)
T ss_pred cCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee
Confidence 3344567888899999999999999994 56899999975432 1111 24567899999999999999999999
Q ss_pred c-cCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc---CCCcEE
Q 002178 690 D-EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD---HKFTAK 765 (956)
Q Consensus 690 ~-~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~---~~~~~k 765 (956)
. +.+.+|-|+|||+|.+|+-||+.+. .+++.+++.|+.||+.||.||.+. .+||||-||||.|||+. .-|.+|
T Consensus 537 slDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIK 613 (775)
T KOG1151|consen 537 SLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIK 613 (775)
T ss_pred eeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeE
Confidence 5 5568899999999999999997643 589999999999999999999987 48899999999999995 457899
Q ss_pred EEeeccccccCCCCCCCccccceecccccCCCcccccccccC----CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHH
Q 002178 766 VADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE 841 (956)
Q Consensus 766 l~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~ 841 (956)
|+|||+++..+.................||..|++||.+.-+ +.+.++||||+||++|.++.|+.||.+.....+.
T Consensus 614 ITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdI 693 (775)
T KOG1151|consen 614 ITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDI 693 (775)
T ss_pred eeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHH
Confidence 999999999876654444444555667899999999998643 5788999999999999999999999765432222
Q ss_pred HHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCC
Q 002178 842 VNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE 921 (956)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP 921 (956)
++. ..+ +...--.+| .-|.-..++.+||+++|.+.-
T Consensus 694 Lqe----NTI---lkAtEVqFP-------------------------------------~KPvVsseAkaFIRRCLaYRK 729 (775)
T KOG1151|consen 694 LQE----NTI---LKATEVQFP-------------------------------------PKPVVSSEAKAFIRRCLAYRK 729 (775)
T ss_pred Hhh----hch---hcceeccCC-------------------------------------CCCccCHHHHHHHHHHHHhhh
Confidence 111 111 000000111 112234445678888888888
Q ss_pred CCCCCCccCCCCCcccc
Q 002178 922 ETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 922 ~~R~sa~e~L~HP~f~~ 938 (956)
++|+.+.++-.||||.-
T Consensus 730 eDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 730 EDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhhhhHHHHccCccccc
Confidence 99999999999999843
No 367
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=5e-32 Score=291.28 Aligned_cols=247 Identities=25% Similarity=0.399 Sum_probs=196.5
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+|++.++||+|+||.||++... +++.+|+|.+.... .....++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5788999999999999999854 68899999987533 23345778899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 702 MSNGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
+++++|.+++... ....+++..++.++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998662 2346889999999999999999999999 999999999999999999999999999876432
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
......++..|+|||.+.+..++.++|+||+|+++|||++|+.||...... +... ....+..
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-~~~~---------~~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-DLRY---------KVQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHH---------HHhcCCC
Confidence 112245788999999999999999999999999999999999999754321 1111 1111222
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
+..+..+...+.+++.+|++.+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 3334455566666666666666666666665543
No 368
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-32 Score=325.83 Aligned_cols=264 Identities=28% Similarity=0.477 Sum_probs=217.0
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeC----C----CcEEEEEEecCCCh-hhHHHHHHHHHHHHhc-CCCceeeeec
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILP----D----GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRL-HHRNLVSLVG 687 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~nIv~l~~ 687 (956)
.++...++..+.+.||+|.||.||+|... . ...||||.++.... ...+.+..|+++|+.+ +|+||+.++|
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG 369 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG 369 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence 45555666677779999999999999843 1 45799999986443 3457899999999998 5999999999
Q ss_pred ccccCCcEEEEEecCCCCCHHHHHhhcC------------C--CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCc
Q 002178 688 YCDEEGEQMLVYEFMSNGTLRDQLSAKS------------K--EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 753 (956)
Q Consensus 688 ~~~~~~~~~LV~e~~~~gsL~~~l~~~~------------~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 753 (956)
+|...+..++|+||++.|+|.++++... . ..+...+.+.++.|||.|++||++.. +|||||.+
T Consensus 370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAa 446 (609)
T KOG0200|consen 370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAA 446 (609)
T ss_pred eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhh
Confidence 9999999999999999999999998754 0 23888999999999999999999998 99999999
Q ss_pred ccEEEcCCCcEEEEeeccccccCCCCCCCccccceeccccc--CCCcccccccccCCCCCcccchhHHHHHHHHHh-CCC
Q 002178 754 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKG--TPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQ 830 (956)
Q Consensus 754 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~ 830 (956)
+|||+.++..+||+|||+|+.....+... .....| ...|||||.+....|+.++||||||++||||+| |..
T Consensus 447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~------~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~ 520 (609)
T KOG0200|consen 447 RNVLITKNKVIKIADFGLARDHYNKDYYR------TKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGT 520 (609)
T ss_pred hhEEecCCCEEEEccccceeccCCCCceE------ecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCC
Confidence 99999999999999999999655433221 111112 345999999999999999999999999999999 888
Q ss_pred CCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhH
Q 002178 831 PISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIW 899 (956)
Q Consensus 831 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~ 899 (956)
||.......+.. ..+.++.+...|..|..+++++|+.||+.+|++||++.++++.++...
T Consensus 521 PYp~~~~~~~l~---------~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 521 PYPGIPPTEELL---------EFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCCCCcHHHHH---------HHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 886522111111 123456667789999999999999999999999999999999998843
No 369
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=8.7e-32 Score=291.20 Aligned_cols=203 Identities=29% Similarity=0.430 Sum_probs=170.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHHhcCCCceeeeecccccC--CcE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE--GEQ 695 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~--~~~ 695 (956)
.+|++.+.||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999964 6899999987532 122345788999999999999999999998654 457
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++|+||+++++|.+++.... .+++...+.++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 89999999999999997543 4788889999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
...... ........++..|+|||++.+..++.++|||||||++||+++|+.||...
T Consensus 157 ~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 157 QTICMS----GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred cccccc----CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 321110 11112345888999999999888999999999999999999999999643
No 370
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=9.2e-32 Score=299.18 Aligned_cols=245 Identities=29% Similarity=0.471 Sum_probs=195.1
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
|+..+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|++++++++|+|++++++++.++...++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 666788999999999999964 68999999986432 22345788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
++ |+|.+.+... ..++++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++.....
T Consensus 107 ~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---- 177 (317)
T cd06635 107 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASP---- 177 (317)
T ss_pred CC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCC----
Confidence 96 5888877543 345899999999999999999999999 99999999999999999999999999875432
Q ss_pred CccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
.....|+..|+|||++. .+.++.++|||||||++|||++|+.||........... +....
T Consensus 178 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~----------~~~~~ 240 (317)
T cd06635 178 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----------IAQNE 240 (317)
T ss_pred -------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH----------HHhcc
Confidence 12235788999999974 45688899999999999999999999875432221111 11111
Q ss_pred C-CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 859 M-GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 859 ~-~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
. ...+..++..+.+++.+|++.+|.+||++.++++...
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 241 SPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred CCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 1 1223445667888888888888888888888876543
No 371
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.6e-32 Score=305.66 Aligned_cols=282 Identities=24% Similarity=0.326 Sum_probs=201.3
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-C--CcEEEEEEecCCC--hhhHHHHHHHHHHHHhc-CCCceeeeeccccc----CCc
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-D--GTVVAVKRAQEGS--LQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDE----EGE 694 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~----~~~ 694 (956)
+|++.+.||+|+||.||++... + +..||+|++.... ....+.+.+|+++++++ +|+||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999964 4 7899999886432 22345778899999999 59999999987532 245
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++++||+. ++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788999985 7999988643 45889999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
....... .........|+..|+|||++.+ ..++.++||||+||++|+|++|+.||...... ........
T Consensus 155 ~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~------ 224 (332)
T cd07857 155 FSENPGE---NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQ------ 224 (332)
T ss_pred ccccccc---ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHH------
Confidence 5432211 1111233568899999998866 56889999999999999999999998654422 11111000
Q ss_pred hccCCCCCCChHHHHHHHHH----HHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCcc
Q 002178 854 VIDGNMGSYPSECVEKFIKL----ALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSS 929 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l----~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e 929 (956)
..+..+++....+..- ...-....+ ++.+ ....+..+....+|+.+|+..||++|+|++|
T Consensus 225 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----------~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 288 (332)
T cd07857 225 ----VLGTPDEETLSRIGSPKAQNYIRSLPNIP--KKPF----------ESIFPNANPLALDLLEKLLAFDPTKRISVEE 288 (332)
T ss_pred ----HhCCCCHHHHHhhhhhhHHHHHHhccccC--Ccch----------HhhCCCCCHHHHHHHHHHccCCcccCCCHHH
Confidence 0111122211111100 000000000 0111 1112333455678999999999999999999
Q ss_pred CCCCCcccc
Q 002178 930 MLKHPYVSS 938 (956)
Q Consensus 930 ~L~HP~f~~ 938 (956)
++.||||+.
T Consensus 289 ll~~~~~~~ 297 (332)
T cd07857 289 ALEHPYLAI 297 (332)
T ss_pred HhcChhhhh
Confidence 999999963
No 372
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.4e-32 Score=313.91 Aligned_cols=271 Identities=20% Similarity=0.311 Sum_probs=186.4
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEe-----------------CCCcEEEEEEecCCChhhHHH--------------HHHH
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGIL-----------------PDGTVVAVKRAQEGSLQGEKE--------------FLTE 670 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~~--------------~~~E 670 (956)
..++|++.++||+|+||+||+|.+ .+++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 235789999987543322223 3346
Q ss_pred HHHHHhcCCCce-----eeeeccccc--------CCcEEEEEecCCCCCHHHHHhhcCC---------------------
Q 002178 671 IQFLSRLHHRNL-----VSLVGYCDE--------EGEQMLVYEFMSNGTLRDQLSAKSK--------------------- 716 (956)
Q Consensus 671 ~~~l~~l~h~nI-----v~l~~~~~~--------~~~~~LV~e~~~~gsL~~~l~~~~~--------------------- 716 (956)
+.++.+++|.++ +++++||.. .+..+|||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 677787743 3578999999999999999874311
Q ss_pred -CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccC
Q 002178 717 -EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGT 795 (956)
Q Consensus 717 -~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt 795 (956)
..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ........++
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~------~~~~~~g~~t 373 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI------NFNPLYGMLD 373 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCC------ccCccccCCC
Confidence 12456778899999999999999998 9999999999999999999999999997543211 0111122357
Q ss_pred CCcccccccccCC--------------------C--CCcccchhHHHHHHHHHhCCC-CCCCCchhHHHHHHHhhcccch
Q 002178 796 PGYLDPEYFLTHK--------------------L--TDKSDVYSLGVVFLELLTGMQ-PISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 796 ~~y~aPE~~~~~~--------------------~--~~~sDVwS~G~ll~elltg~~-pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
+.|+|||.+.... + ..+.||||+||+++||++|.. ||............
T Consensus 374 p~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~-------- 445 (507)
T PLN03224 374 PRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQ-------- 445 (507)
T ss_pred cceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhh--------
Confidence 8999999985432 1 124799999999999999875 55422111110000
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCC---CCCCCCcc
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKE---ETPPSSSS 929 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP---~~R~sa~e 929 (956)
. ...... |......+..+. .+........|++.+||+.+| .+|+|++|
T Consensus 446 ---------~-~~~~~~--------~r~~~~~~~~~~-----------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~e 496 (507)
T PLN03224 446 ---------Y-DNDLNR--------WRMYKGQKYDFS-----------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQ 496 (507)
T ss_pred ---------c-cchHHH--------HHhhcccCCCcc-----------cccccChHHHHHHHHHhccCCCCcccCCCHHH
Confidence 0 000000 011111111111 122334556789999999766 68999999
Q ss_pred CCCCCcccc
Q 002178 930 MLKHPYVSS 938 (956)
Q Consensus 930 ~L~HP~f~~ 938 (956)
+|+||||..
T Consensus 497 aL~Hp~f~~ 505 (507)
T PLN03224 497 ALSHRFFLP 505 (507)
T ss_pred HhCCCCcCC
Confidence 999999964
No 373
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.3e-32 Score=303.99 Aligned_cols=287 Identities=24% Similarity=0.362 Sum_probs=207.5
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcCCCceeeeeccccc-CC
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-EG 693 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-~~ 693 (956)
++...+++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 44557889999999999999999999855 78999999875422 2234677889999999999999999998865 56
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
..++||||+ +++|.+++.. ..+++.....++.|+++||.|||+.+ |+||||||+||++++++.+||+|||.+.
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCcccccc
Confidence 789999999 6799988854 24778888899999999999999999 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 157 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~-------- 218 (328)
T cd07856 157 IQDPQ----------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSII-------- 218 (328)
T ss_pred ccCCC----------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--------
Confidence 54211 122356788999999866 56899999999999999999999999654321111000
Q ss_pred hhccCCCCCCChHHHHHHHH-HHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCC
Q 002178 853 SVIDGNMGSYPSECVEKFIK-LALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSML 931 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~-l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L 931 (956)
....+..+++....+.. -....+...+...+.. .....+..+....+++.+|+..+|++|++++|++
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell 286 (328)
T cd07856 219 ---TDLLGTPPDDVINTICSENTLRFVQSLPKREPVP---------FSEKFKNADPSAIDLLEKMLVFDPQKRISAAEAL 286 (328)
T ss_pred ---HHHhCCCCHHHHHhccchhhHHHHhhccccCCCc---------HHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 00111222222111100 0000111111111100 0111233345566899999999999999999999
Q ss_pred CCCccccCCC
Q 002178 932 KHPYVSSDVS 941 (956)
Q Consensus 932 ~HP~f~~~~~ 941 (956)
.||||.....
T Consensus 287 ~~~~~~~~~~ 296 (328)
T cd07856 287 AHPYLAPYHD 296 (328)
T ss_pred cCCccccccC
Confidence 9999965443
No 374
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=306.38 Aligned_cols=318 Identities=23% Similarity=0.248 Sum_probs=206.1
Q ss_pred cceeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceee
Q 002178 81 YLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 81 ~~~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
+..++.|++++|.|+..-...|-++++|+.++|.+|.++ .||...+...+|+.|+|.+|.|+..-.+.+..++.|+.||
T Consensus 77 p~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslD 155 (873)
T KOG4194|consen 77 PSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLD 155 (873)
T ss_pred ccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhh
Confidence 456778889888888777777777777777777777777 6665444445566666666666655555566666666666
Q ss_pred cccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCC
Q 002178 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
||.|.|+.+...+|..-.++++|+|++|.|+..-...|.++.+|..|.|++|+++...+..|.++++|+.|+|..|+|.-
T Consensus 156 LSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~iri 235 (873)
T KOG4194|consen 156 LSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRI 235 (873)
T ss_pred hhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceee
Confidence 66666664444455555556666666666655555555555566666666666665555555555566666555555542
Q ss_pred C-----------------------CCcccccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCcCCCCC-CC
Q 002178 241 T-----------------------TIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPG-RL 295 (956)
Q Consensus 241 ~-----------------------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~-~~ 295 (956)
+ .-...|-.+.++++|+|+.|+++..-.. +.++++|+.|+||+|.|...-+.. .+
T Consensus 236 ve~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsf 315 (873)
T KOG4194|consen 236 VEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSF 315 (873)
T ss_pred ehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhh
Confidence 1 1223455555566666666666554443 566777777777777776433333 34
Q ss_pred ccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhhhhhccC----------------------CCCcce
Q 002178 296 SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTL----------------------NATETF 353 (956)
Q Consensus 296 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l----------------------~~~~L~ 353 (956)
..+|++|+|++|+|+...+.+|..|..|++|+|++|.++..-...|..+++| .+++|+
T Consensus 316 tqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lr 395 (873)
T KOG4194|consen 316 TQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLR 395 (873)
T ss_pred cccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhh
Confidence 4478888888888887777777766666666666666653333333333322 355677
Q ss_pred EEEccCCCCCCCCCC-C-CCCCCcEEEecCCc-----------------------ccccCCcccccCCCCC
Q 002178 354 ILDFQNNNLTNISGS-F-NIPPNVTVRLRGNP-----------------------FCLNTNAEQFCGSHSD 399 (956)
Q Consensus 354 ~L~L~~N~L~~l~~~-~-~~~~l~~l~l~~Np-----------------------~~c~c~~~~~~~~~~~ 399 (956)
.|+|.+|+|..++.. | .++.+..|+|.+|+ +.|||++.||-+|+..
T Consensus 396 kL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCDCql~Wl~qWl~~ 466 (873)
T KOG4194|consen 396 KLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCDCQLKWLAQWLYR 466 (873)
T ss_pred heeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEeccHHHHHHHHHh
Confidence 899999999988865 3 58888888888886 5799999999999954
No 375
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.3e-32 Score=297.55 Aligned_cols=199 Identities=29% Similarity=0.457 Sum_probs=165.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCCh-hhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~ 699 (956)
-++|++.+.||+|+||.||+|.+++ ++.||||.++.... .....+..|+.++.+.. |+||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3668889999999999999999864 89999999875432 23456677887776665 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
||+ ++++.+++.... ..+++..+..++.|+++||+|||+ .+ |+||||+|+||++++++.+||+|||++......
T Consensus 94 e~~-~~~l~~l~~~~~-~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 94 ELM-STCLDKLLKRIQ-GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ecc-CcCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 998 457877775533 368999999999999999999997 46 999999999999999999999999998765321
Q ss_pred CCCCccccceecccccCCCcccccccccCC----CCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 779 DIEGIVPAHVSTVVKGTPGYLDPEYFLTHK----LTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 779 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
. ......++..|+|||.+.+.. ++.++||||||+++|||++|+.||..
T Consensus 169 ~--------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 220 (296)
T cd06618 169 K--------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKN 220 (296)
T ss_pred C--------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCc
Confidence 1 112234778999999987654 78899999999999999999999964
No 376
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=1.7e-32 Score=284.65 Aligned_cols=268 Identities=23% Similarity=0.330 Sum_probs=223.9
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCC------CcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCCceeeeecc
Q 002178 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPD------GTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (956)
Q Consensus 616 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~ 688 (956)
.+++.+...+++....+-+|.||.||.|.|.+ .+.|-||.++.... -....+..|.-++..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 45777778899999999999999999998753 34577787765433 334578889999999999999999999
Q ss_pred ccc-CCcEEEEEecCCCCCHHHHHhh------cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC
Q 002178 689 CDE-EGEQMLVYEFMSNGTLRDQLSA------KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 689 ~~~-~~~~~LV~e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
+.+ .+..+.+|.++.-|+|..++.. ...+.++..+...++.|++.|++|||+++ |||.||.++|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhh
Confidence 854 5577999999999999999972 34456888889999999999999999999 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh-CCCCCCCCchhHH
Q 002178 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT-GMQPISHGKNIVR 840 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~ 840 (956)
.++||+|=.+++.+-..++.. ..........||+||.+....|+.++||||||+++|||+| |+.|+..-+...
T Consensus 433 LqVkltDsaLSRDLFP~DYhc-----LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE- 506 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHC-----LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE- 506 (563)
T ss_pred eeEEeccchhccccCcccccc-----cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-
Confidence 999999999999876655432 1233345678999999999999999999999999999999 999997654321
Q ss_pred HHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 841 EVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
....+.|+.+...|-+|++++..+|..||...|++||++++++.-|.++..+
T Consensus 507 ---------m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~q 558 (563)
T KOG1024|consen 507 ---------MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQ 558 (563)
T ss_pred ---------HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHH
Confidence 1123566777788999999999999999999999999999999999887654
No 377
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.98 E-value=2.3e-33 Score=285.76 Aligned_cols=282 Identities=23% Similarity=0.323 Sum_probs=216.7
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccC------C
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEE------G 693 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~------~ 693 (956)
..+|.....+|.|.- .|..|.+. .++.||+|+.... .....++..+|..++..+.|+||++++.+|... .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 456777888999987 66666543 5899999987643 233456788999999999999999999998543 3
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
+.|+|||+| .++|...++- .++-.....|..|++.|+.|||+.+ |+||||||+||++..++.+||.|||+|+
T Consensus 95 e~y~v~e~m-~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILM----ELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhc
Confidence 679999999 6799998863 3666778899999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchh
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFS 853 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~ 853 (956)
.... ....+....|..|+|||++.+..+.+.+||||+||++.||++|+..|.......+|.+..
T Consensus 167 ~e~~--------~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~-------- 230 (369)
T KOG0665|consen 167 TEDT--------DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKII-------- 230 (369)
T ss_pred ccCc--------ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHH--------
Confidence 6432 234566778999999999999889999999999999999999999987554444443322
Q ss_pred hccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh-hC-------CCCCCCCccccccccCCCCCCCC
Q 002178 854 VIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN-MM-------PESDTKTPEFINSEHTSKEETPP 925 (956)
Q Consensus 854 ~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~-~~-------~~~~~~~~~ll~~~L~~dP~~R~ 925 (956)
..++...+.+..++...+..... .||.... ...-+.+.+ .+ +.....+.+++.+||..||++|+
T Consensus 231 ---~~lgtpd~~F~~qL~~~~r~yv~----~~~~y~~-~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Ri 302 (369)
T KOG0665|consen 231 ---EQLGTPDPSFMKQLQPTVRNYVE----NRPQYQA-ISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRI 302 (369)
T ss_pred ---HHhcCCCHHHHHHhhHHHHHHhh----cChHhhc-cchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcc
Confidence 23455667777777777766555 3333222 111111111 01 11223346799999999999999
Q ss_pred CCccCCCCCccc
Q 002178 926 SSSSMLKHPYVS 937 (956)
Q Consensus 926 sa~e~L~HP~f~ 937 (956)
|++++|+|||+.
T Consensus 303 sv~daL~HPY~~ 314 (369)
T KOG0665|consen 303 SVDDALRHPYIK 314 (369)
T ss_pred cHHHHhcCCeee
Confidence 999999999996
No 378
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=8.2e-33 Score=305.38 Aligned_cols=200 Identities=30% Similarity=0.453 Sum_probs=177.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh--hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ--GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
...|.+...||+|.|++|..|+.. ++..||+|.+.+.... ..+.+.+|+++|..++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 457888999999999999999965 6999999998865433 3345889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+.+|.+++++...+. ..+..+..++.|+.+|++|||+++ |||||||++|||++.+.++||+|||++..+..
T Consensus 135 eya~~ge~~~yl~~~gr--~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~-- 207 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR--MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDY-- 207 (596)
T ss_pred EeccCchhHHHHHhccc--chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecc--
Confidence 99999999999987665 445788889999999999999999 99999999999999999999999999988763
Q ss_pred CCCccccceecccccCCCcccccccccCCC-CCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKL-TDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
.......+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||+..
T Consensus 208 ------~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~ 258 (596)
T KOG0586|consen 208 ------GLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ 258 (596)
T ss_pred ------cccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence 234566789999999999999776 46799999999999999999999753
No 379
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=4.1e-32 Score=290.97 Aligned_cols=192 Identities=31% Similarity=0.429 Sum_probs=167.7
Q ss_pred eeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCH
Q 002178 632 IGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
||+|+||.||++... +++.||+|.+...... ....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999975 5899999998754332 345788999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAH 787 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 787 (956)
.+++.... .+++..+..++.|+++||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 ~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~ 148 (250)
T cd05123 81 FSHLSKEG--RFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------S 148 (250)
T ss_pred HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC-------C
Confidence 99997643 5889999999999999999999988 9999999999999999999999999997654321 1
Q ss_pred eecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 788 VSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 788 ~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
......++..|+|||...+..++.++|+||||+++||+++|+.||...
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~ 196 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAE 196 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 123445788999999999888899999999999999999999999644
No 380
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=8e-32 Score=295.46 Aligned_cols=199 Identities=28% Similarity=0.351 Sum_probs=168.0
Q ss_pred CCCCCCeeeeeCCeEEEEEEe----CCCcEEEEEEecCCCh----hhHHHHHHHHHHHHhc-CCCceeeeecccccCCcE
Q 002178 625 NFNSSTQIGQGGYGKVYKGIL----PDGTVVAVKRAQEGSL----QGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 695 (956)
+|++.+.||+|++|.||++.. .+++.||||.++.... ...+.+.+|+++++++ +|+||+++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999984 2578899999874322 2235678899999999 599999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
++||||+++|+|.+++... ..+++..+..++.|+++||.|||+.+ ++||||||+||+++.++.++|+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 9999999999999998653 35788899999999999999999988 999999999999999999999999998765
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCC--CCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHK--LTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
.... ........|+..|+|||.+.+.. .+.++||||||+++|||++|..||..
T Consensus 156 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 210 (288)
T cd05583 156 LAEE------EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210 (288)
T ss_pred cccc------ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCccc
Confidence 4321 11112345788999999987655 78899999999999999999999853
No 381
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.98 E-value=1.4e-31 Score=288.84 Aligned_cols=200 Identities=26% Similarity=0.364 Sum_probs=165.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC-----ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
+|.+.+.||+|+||.||++... .+..+++|.++.. .......+..|+.++++++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 5888899999999999999864 3455666655432 122234567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 699 YEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
|||+++++|.+++.. .....+++..++.++.|+++||.|||+.+ ++|+||||+||++++ +.+||+|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998865 23456899999999999999999999998 999999999999986 569999999987653
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
... .......|+..|+|||...+..++.++|+||||+++|+|++|..||...
T Consensus 157 ~~~-------~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~ 208 (260)
T cd08222 157 GSC-------DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ 208 (260)
T ss_pred CCc-------ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 221 1122345788999999998888899999999999999999999998643
No 382
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.98 E-value=2.5e-32 Score=305.10 Aligned_cols=200 Identities=31% Similarity=0.465 Sum_probs=171.6
Q ss_pred CCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeeccccc------CCcEEE
Q 002178 626 FNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE------EGEQML 697 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~------~~~~~L 697 (956)
+...+.||+|+||.||+|+. ..|+.||||.++... ....+...+|++++++++|+|||++++.-.+ .....+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 34467899999999999995 479999999988643 3345677899999999999999999988644 346799
Q ss_pred EEecCCCCCHHHHHhh-cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc--CCC--cEEEEeeccc
Q 002178 698 VYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKF--TAKVADFGLS 772 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~--~~~--~~kl~DfGla 772 (956)
|||||.+|||+..+.+ .+...+++.+.+.+..+++.||.|||+++ |+||||||.||++- .+| .-||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999976 34467999999999999999999999999 99999999999983 223 5899999999
Q ss_pred cccCCCCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
+.++.. .......||..|.+||.+.. +.|+..+|.|||||++||+.||..||.+..
T Consensus 172 rel~d~--------s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 172 RELDDN--------SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ccCCCC--------CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 987532 24567889999999999984 888999999999999999999999997543
No 383
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=5.8e-33 Score=269.05 Aligned_cols=279 Identities=16% Similarity=0.340 Sum_probs=208.6
Q ss_pred hcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccC--CcEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE--GEQMLV 698 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~--~~~~LV 698 (956)
.++|++.+++|+|.++.||.|. ..+.+.++||+++.. ..+.+.+|+++|+.+. ||||+++++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 5789999999999999999998 557889999999853 2457889999999997 99999999998654 467899
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeeccccccCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLSRLAPV 777 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla~~~~~ 777 (956)
+||+.+.+...+.. .++...+..+..+++.||.|+|++| |+|||+||.|+++|.. -.++|+|+|+|.++..
T Consensus 114 FE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 114 FEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred hhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 99999888777653 3677788899999999999999999 9999999999999965 4799999999998753
Q ss_pred CCCCCccccceecccccCCCccccccccc-CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 856 (956)
.. .......+..|.-||.+.. ..|+.+-|+|||||++.+|+..+.||+++.+-.++...... ++
T Consensus 186 ~~--------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIak------VL- 250 (338)
T KOG0668|consen 186 GK--------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAK------VL- 250 (338)
T ss_pred Cc--------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHH------Hh-
Confidence 32 1223345567888999876 56899999999999999999999999987765544332211 10
Q ss_pred CCCCCCChHHHHHHHHHH-HHhcccCCCCCCCHHHHHHHHHH--hHhhCCC-----CCCCCccccccccCCCCCCCCCCc
Q 002178 857 GNMGSYPSECVEKFIKLA-LKCCQDETDARPSMSEVMRELES--IWNMMPE-----SDTKTPEFINSEHTSKEETPPSSS 928 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~-~~c~~~~p~~RPs~~~v~~~L~~--~~~~~~~-----~~~~~~~ll~~~L~~dP~~R~sa~ 928 (956)
+. .++..-+ +.-+. --|.+.+++..-.+ +....+. ..+++.||+.++|.+|-.+|+||+
T Consensus 251 ---Gt------~el~~Yl~KY~i~----Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTak 317 (338)
T KOG0668|consen 251 ---GT------DELYAYLNKYQID----LDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAK 317 (338)
T ss_pred ---Ch------HHHHHHHHHHccC----CChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchH
Confidence 00 0111111 11111 12334443322211 1112221 146678999999999999999999
Q ss_pred cCCCCCccccCC
Q 002178 929 SMLKHPYVSSDV 940 (956)
Q Consensus 929 e~L~HP~f~~~~ 940 (956)
||+.||||..-.
T Consensus 318 Eam~HpyF~~~~ 329 (338)
T KOG0668|consen 318 EAMAHPYFAPVR 329 (338)
T ss_pred HHhcCchHHHHH
Confidence 999999996543
No 384
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=3.6e-32 Score=318.28 Aligned_cols=256 Identities=25% Similarity=0.349 Sum_probs=188.4
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCC-hhhHHHHHHHHHHHHhcCCCceeeeeccccc--------
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGS-LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDE-------- 691 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~-------- 691 (956)
-.++|+..+.||+||||.|||++.+ ||+.||||++.... ...-..+.+|+.++++++|||||+++..+.+
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 3456778889999999999999965 89999999987643 2233578899999999999999998721100
Q ss_pred --------------------------------------------------------------------------------
Q 002178 692 -------------------------------------------------------------------------------- 691 (956)
Q Consensus 692 -------------------------------------------------------------------------------- 691 (956)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------C--------CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhh
Q 002178 692 -----------------------E--------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHT 740 (956)
Q Consensus 692 -----------------------~--------~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~ 740 (956)
+ ...||=||||+..+++++++++.... .....++++.+|++||+|+|+
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHHHHHHHHHHHHHHHHHHh
Confidence 0 12578899999888888887653221 467788999999999999999
Q ss_pred cCCCCEeccCCCcccEEEcCCCcEEEEeeccccccC----CC-------CCCCccccceecccccCCCcccccccccC--
Q 002178 741 EADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP----VP-------DIEGIVPAHVSTVVKGTPGYLDPEYFLTH-- 807 (956)
Q Consensus 741 ~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~----~~-------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-- 807 (956)
+| ||||||||.||++|++..|||+|||+|+... .. ...........+...||.-|+|||++.+.
T Consensus 716 ~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 716 QG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred Cc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 99 9999999999999999999999999998722 00 00011122245667899999999999764
Q ss_pred -CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCC---CChHHHHHHHHHHHHhcccCCC
Q 002178 808 -KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGS---YPSECVEKFIKLALKCCQDETD 883 (956)
Q Consensus 808 -~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~c~~~~p~ 883 (956)
.|+.|+|+||+|++++||+ .||.....-... +..+-++..+. +..+....=.+++.++++.||.
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~i---------L~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~ 860 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEML---YPFGTSMERASI---------LTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPS 860 (1351)
T ss_pred ccccchhhhHHHHHHHHHHh---ccCCchHHHHHH---------HHhcccCCCCCCcccccccchHHHHHHHHHhcCCCc
Confidence 5999999999999999999 567543221111 11222233322 2344445556777777777888
Q ss_pred CCCCHHHHHH
Q 002178 884 ARPSMSEVMR 893 (956)
Q Consensus 884 ~RPs~~~v~~ 893 (956)
+||++.+++.
T Consensus 861 kRPtA~eLL~ 870 (1351)
T KOG1035|consen 861 KRPTATELLN 870 (1351)
T ss_pred cCCCHHHHhh
Confidence 8887777764
No 385
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=6.3e-32 Score=327.14 Aligned_cols=146 Identities=25% Similarity=0.381 Sum_probs=131.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
++|.+.++||+|+||+||+|... +++.||+|+++.... .....+.+|+.+++.++|+||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999975 689999999875332 22357888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
||+++++|.+++.... .+++..++.|+.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 84 Ey~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 84 EYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999997543 4788889999999999999999998 99999999999999999999999999863
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-32 Score=305.07 Aligned_cols=247 Identities=21% Similarity=0.283 Sum_probs=196.5
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEe
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
++.|.....+|.|+|+.|-.+... +++..+||++.... .+..+|+.++... +||||+++.+.+.+..+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 456777778999999999999854 68899999987652 2334577665555 69999999999999999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEE-cCCCcEEEEeeccccccCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILL-DHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl-~~~~~~kl~DfGla~~~~~~~ 779 (956)
++.++-+.+.+..... +. ..+..|+.+|+.|+.|||++| +|||||||+|||+ ++.++++|+|||.++.....
T Consensus 397 ~l~g~ell~ri~~~~~--~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--FC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcch--hH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999988887755432 23 677789999999999999999 9999999999999 68999999999999876422
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
....+-|..|.|||+.....|+.++|+||||++||+|++|+.||....+-.
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~-------------------- 520 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGI-------------------- 520 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchH--------------------
Confidence 223346779999999999999999999999999999999999997543210
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCcc-cc
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYV-SS 938 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f-~~ 938 (956)
-+..|+ .+|+++ ......+.|++++||+.||++|+++.+++.|||| +.
T Consensus 521 -------------ei~~~i-----~~~~~s-------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~~ 569 (612)
T KOG0603|consen 521 -------------EIHTRI-----QMPKFS-------------ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLSH 569 (612)
T ss_pred -------------HHHHhh-----cCCccc-------------cccCHHHHHHHHHhccCChhhCcChhhhccCcchhcC
Confidence 011111 122222 1224456789999999999999999999999999 44
Q ss_pred CC
Q 002178 939 DV 940 (956)
Q Consensus 939 ~~ 940 (956)
+.
T Consensus 570 ~t 571 (612)
T KOG0603|consen 570 PT 571 (612)
T ss_pred CC
Confidence 33
No 387
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=7.7e-32 Score=286.62 Aligned_cols=179 Identities=23% Similarity=0.214 Sum_probs=152.7
Q ss_pred eCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHHHHHhh
Q 002178 635 GGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 713 (956)
Q Consensus 635 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~ 713 (956)
|.+|+||++... +++.||+|.+.... .+.+|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999965 68999999987543 233455555566799999999999999999999999999999999865
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccc
Q 002178 714 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 793 (956)
Q Consensus 714 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 793 (956)
.. .+++..+..++.|+++||+|||+.+ |+||||||+||+++.++.++++|||.+...... .....
T Consensus 79 ~~--~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 79 FL--NIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred hc--CCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 43 4889999999999999999999998 999999999999999999999999987654321 11233
Q ss_pred cCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCC
Q 002178 794 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (956)
Q Consensus 794 gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~ 833 (956)
++..|+|||.+.+..++.++||||+|+++|||++|+.|+.
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~ 183 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVE 183 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhh
Confidence 5678999999988889999999999999999999988764
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3.4e-32 Score=321.23 Aligned_cols=277 Identities=23% Similarity=0.316 Sum_probs=178.1
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-C----CcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecc------cc
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-D----GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGY------CD 690 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~------~~ 690 (956)
..++|++.+.||+|+||.||+|.+. + +..||+|++...... +....| .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999965 4 689999987643211 111111 1222223333332222 24
Q ss_pred cCCcEEEEEecCCCCCHHHHHhhcCCC------------------CchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCC
Q 002178 691 EEGEQMLVYEFMSNGTLRDQLSAKSKE------------------PLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIK 752 (956)
Q Consensus 691 ~~~~~~LV~e~~~~gsL~~~l~~~~~~------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk 752 (956)
.+...++||||+++++|.+++...... ......+..++.|++.||+|||+++ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 566899999999999999998754211 1123345679999999999999998 9999999
Q ss_pred cccEEEcC-CCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC----------------------CC
Q 002178 753 ASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH----------------------KL 809 (956)
Q Consensus 753 ~~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~ 809 (956)
|+|||++. ++.+||+|||+|+...... ........+++.|+|||.+... .+
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 99999986 5799999999997653221 1222345688999999966422 23
Q ss_pred CCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHH
Q 002178 810 TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMS 889 (956)
Q Consensus 810 ~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~ 889 (956)
+.++|||||||++|||+++..++.. .... ....... ...+.. .+... ..+..++...
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~--~~~~-~~~~l~~-----------~~~~~~---~~~~~------~~~~~~~~~~ 413 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDS--NLIQ-FNRQLKR-----------NDYDLV---AWRKL------VEPRASPDLR 413 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCch--HHHH-HHHHHHh-----------cCCcHH---HHHHh------hccccchhhh
Confidence 4467999999999999987555421 1111 1110000 000000 01110 0111122211
Q ss_pred HHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccCCC
Q 002178 890 EVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSDVS 941 (956)
Q Consensus 890 ~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~~~ 941 (956)
+.. +.+........+|+.+||+.||++|+|++|+|+||||+....
T Consensus 414 ~~~-------~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 414 RGF-------EVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred hhh-------hhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 111 111112223458999999999999999999999999977544
No 389
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=3.7e-31 Score=293.10 Aligned_cols=196 Identities=31% Similarity=0.509 Sum_probs=166.1
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCC---ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEG---SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
+.|+..+.||+|+||.||+|+.. +++.||+|.+... .....+++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667788999999999999965 6889999987642 2233457888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
||+. |++.+++.... .++++..+..++.|++.|+.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9995 68888775433 45889999999999999999999998 999999999999999999999999998764321
Q ss_pred CCCccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
....++..|+|||.+. ...++.++|||||||++|||++|+.||...
T Consensus 169 ----------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 217 (308)
T cd06634 169 ----------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217 (308)
T ss_pred ----------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccc
Confidence 2235788999999975 356788999999999999999999998653
No 390
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=6.1e-31 Score=291.97 Aligned_cols=195 Identities=33% Similarity=0.522 Sum_probs=165.7
Q ss_pred CCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 626 FNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
|...++||+|+||+||+|+.. +++.||+|.+..... ...+.+.+|++++++++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556778999999999999964 689999999864322 2335688899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
+. |++.+++... ..++++..+..++.|++.||.|||+.+ ++|+||||+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 103 CL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred CC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 95 6888887653 345889999999999999999999999 99999999999999999999999999864321
Q ss_pred CccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.....|+..|+|||++. ...++.++|||||||++|||++|..||....
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~ 224 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN 224 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 12345788999999984 4568889999999999999999999987543
No 391
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-32 Score=282.98 Aligned_cols=243 Identities=22% Similarity=0.354 Sum_probs=194.1
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHH---HHHHHHHHHHhc-CCCceeeeecccccCCcE
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEK---EFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~---~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~ 695 (956)
+-..+|..+.+||+|+||+|.+|..+ +.+.+|||+++++...... --..|-++|... +-|.+++++.+|+.-+.+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRL 425 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRL 425 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhe
Confidence 33457888999999999999999865 4678999998875433222 224566666665 478899999999999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccccc
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLA 775 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~ 775 (956)
|+||||+.||+|-.+++.-++ +.+..+..+|..||-||-+||+++ ||.||||.+||++|.+|.+||+|||+++.-
T Consensus 426 yFVMEyvnGGDLMyhiQQ~Gk--FKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 426 YFVMEYVNGGDLMYHIQQVGK--FKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred eeEEEEecCchhhhHHHHhcc--cCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc
Confidence 999999999999988876543 777888899999999999999999 999999999999999999999999999753
Q ss_pred CCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 776 PVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
..........+||+.|+|||++..++|+.++|.|||||+||||+.|+.||+..+. .+..+ .+
T Consensus 501 -------i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE-~elF~----------aI 562 (683)
T KOG0696|consen 501 -------IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-DELFQ----------AI 562 (683)
T ss_pred -------ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH-HHHHH----------HH
Confidence 2234455678899999999999999999999999999999999999999976542 22111 11
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCC
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARP 886 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP 886 (956)
....-.+|...+.+...+....+.+.|.+|-
T Consensus 563 ~ehnvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 563 MEHNVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred HHccCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 2222356776777777777766777777663
No 392
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5e-31 Score=299.91 Aligned_cols=258 Identities=27% Similarity=0.436 Sum_probs=213.6
Q ss_pred cHHHHHHHhcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccc--
Q 002178 615 TYGEMALATNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCD-- 690 (956)
Q Consensus 615 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~-- 690 (956)
.++.+...++-|++.+.||+|.+|.||+++ .++++.+|+|+..... ..++++..|.++++.. +|||++.++|+|.
T Consensus 10 ~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 10 DLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred chhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 344555567889999999999999999999 4579999999887543 3345778899999888 6999999999983
Q ss_pred ---cCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEE
Q 002178 691 ---EEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 767 (956)
Q Consensus 691 ---~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 767 (956)
.+++++||||||.+||..|+++.-....+.|..+..|++.++.|+.+||... ++|||||-.|||++.++.||+.
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLv 165 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLV 165 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEe
Confidence 3578999999999999999998766778999999999999999999999998 9999999999999999999999
Q ss_pred eeccccccCCCCCCCccccceecccccCCCcccccccccC-----CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHH
Q 002178 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREV 842 (956)
Q Consensus 768 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~ 842 (956)
|||.+..++.. ........||+.|||||++... .|+.++|+||+|++..||--|.+|+.+.....
T Consensus 166 DFGvSaQldsT-------~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr--- 235 (953)
T KOG0587|consen 166 DFGVSAQLDST-------VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR--- 235 (953)
T ss_pred eeeeeeeeecc-------cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---
Confidence 99999876532 2344567899999999999653 47789999999999999999999997654321
Q ss_pred HHHhhcccchhhccCCCCC--CChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 843 NIAYQSSMMFSVIDGNMGS--YPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
.++.+.....+. -|..+.+++.+.+..|+.+|.++||++.++++
T Consensus 236 -------aLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 236 -------ALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred -------hhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 122222222222 27889999999999999999999999988764
No 393
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.97 E-value=2.6e-31 Score=281.29 Aligned_cols=296 Identities=22% Similarity=0.333 Sum_probs=215.7
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeC----CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccC
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILP----DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEE 692 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~ 692 (956)
++....+.|...++||.|.|++||+|.+. ..+.||+|.+...+. ...+.+|+++|..+. +.||+++.+++..+
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 44556688999999999999999999853 468999998875433 346889999999984 99999999999999
Q ss_pred CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeecc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGL 771 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGl 771 (956)
+...+|+||++...-.++... ++..++..+.+.+..||+++|+.| ||||||||+|+|.+. .+.-.|.|||+
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred CeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 999999999999998888854 567888999999999999999999 999999999999975 46789999999
Q ss_pred ccccCCCC------C------C-------------C------------ccccceecccccCCCccccccccc-CCCCCcc
Q 002178 772 SRLAPVPD------I------E-------------G------------IVPAHVSTVVKGTPGYLDPEYFLT-HKLTDKS 813 (956)
Q Consensus 772 a~~~~~~~------~------~-------------~------------~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~s 813 (956)
|...+... . . + ...........||++|+|||++.. ...+.++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 97321100 0 0 0 000112234569999999999875 5678899
Q ss_pred cchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHH--hcccCCCCCCCHHHH
Q 002178 814 DVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALK--CCQDETDARPSMSEV 891 (956)
Q Consensus 814 DVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--c~~~~p~~RPs~~~v 891 (956)
||||.|++++-+++++.||....+..+....... .+......+...+-.+ -|++ ..+|+..++
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~t-------------ifG~~~mrk~A~l~g~~~l~~k--sn~~~~~e~ 324 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIAT-------------IFGSAEMRKCAALPGRILLWQK--SNIPTIPEL 324 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHH-------------HhChHHHHHHhhcCCceeeecc--ccccccHHH
Confidence 9999999999999999999875543221111000 0011111111111111 2222 446666666
Q ss_pred HHHHHHhH-hhCCC--------------CCCCCccccccccCCCCCCCCCCccCCCCCcccc
Q 002178 892 MRELESIW-NMMPE--------------SDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSS 938 (956)
Q Consensus 892 ~~~L~~~~-~~~~~--------------~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~ 938 (956)
....+... ..... ....+.||++++|..||.+|+||+|||+||||..
T Consensus 325 ~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 325 RVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred HhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 65555441 11111 1124578999999999999999999999999973
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-32 Score=305.86 Aligned_cols=256 Identities=27% Similarity=0.394 Sum_probs=196.5
Q ss_pred CCCCCeeeeeCCeE-EEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecccccCCcEEEEEecCC
Q 002178 626 FNSSTQIGQGGYGK-VYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 626 y~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
|...+.+|.|+.|+ ||+|.. +|+.||||++-... ..-..+|+..++.- .|||||++++.-.+....|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~---~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF---FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh---HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44456789999985 799998 67899999886433 23557899998887 5999999999999999999999999
Q ss_pred CCCHHHHHhhc--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---C--CcEEEEeeccccccC
Q 002178 704 NGTLRDQLSAK--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---K--FTAKVADFGLSRLAP 776 (956)
Q Consensus 704 ~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~--~~~kl~DfGla~~~~ 776 (956)
..+|.+++... ..........+.+..|+++||++||+.+ ||||||||.||||+. + .+++|+|||+++.++
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 67999999763 1111121445778999999999999988 999999999999976 2 579999999999886
Q ss_pred CCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhC-CCCCCCCchhHHHHHHHhhcccchhhc
Q 002178 777 VPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTG-MQPISHGKNIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 777 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg-~~pf~~~~~~~~~~~~~~~~~~~~~~~ 855 (956)
.... .-.......||.+|+|||.+....-+.++||||+||++|+.++| .+||.+ ...++.++.-....+
T Consensus 663 ~~~s----S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd--~~~R~~NIl~~~~~L---- 732 (903)
T KOG1027|consen 663 GGKS----SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGD--SLERQANILTGNYTL---- 732 (903)
T ss_pred CCcc----hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCc--hHHhhhhhhcCccce----
Confidence 4331 22235667899999999999998888899999999999999995 889954 333333321110000
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCc
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPY 935 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~ 935 (956)
.+++ ++.+..+.|+|.+|+..||..||+|.++|.||+
T Consensus 733 --------------------~~L~-----------------------~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPl 769 (903)
T KOG1027|consen 733 --------------------VHLE-----------------------PLPDCEAKDLISRMLNPDPQLRPSATDVLNHPL 769 (903)
T ss_pred --------------------eeec-----------------------cCchHHHHHHHHHhcCCCcccCCCHHHHhCCCc
Confidence 0111 111114568999999999999999999999999
Q ss_pred cccCCCC
Q 002178 936 VSSDVSG 942 (956)
Q Consensus 936 f~~~~~~ 942 (956)
|....+.
T Consensus 770 FW~~ekr 776 (903)
T KOG1027|consen 770 FWDSEKR 776 (903)
T ss_pred cCChHHH
Confidence 9876653
No 395
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=1.8e-31 Score=285.75 Aligned_cols=213 Identities=24% Similarity=0.276 Sum_probs=179.7
Q ss_pred cccccHHHHHHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcC------CCcee
Q 002178 611 VRSFTYGEMALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH------HRNLV 683 (956)
Q Consensus 611 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv 683 (956)
...|.+.-.++...+|.+....|+|-|++|..|.+. .|..||||++...... .+.=+.|+++|++|+ --|++
T Consensus 419 EGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~~AD~Edk~Hcl 497 (752)
T KOG0670|consen 419 EGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLNDADPEDKFHCL 497 (752)
T ss_pred cceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhhccCchhhhHHH
Confidence 345666666777899999999999999999999975 4889999999864332 345578999999996 34889
Q ss_pred eeecccccCCcEEEEEecCCCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-
Q 002178 684 SLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK- 761 (956)
Q Consensus 684 ~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~- 761 (956)
+++..|....++|||+|-+ .-+|.+.|+..+. ..+....+..++.|+.-||..|-..+ |+|.||||+|||+++.
T Consensus 498 rl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k 573 (752)
T KOG0670|consen 498 RLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESK 573 (752)
T ss_pred HHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCc
Confidence 9999999999999999988 5799999987543 46888999999999999999999988 9999999999999865
Q ss_pred CcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCch
Q 002178 762 FTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKN 837 (956)
Q Consensus 762 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~ 837 (956)
..+||||||.|......+. +....+..|+|||++.|.+|+...|+||+||+|||+.||+..|....+
T Consensus 574 ~iLKLCDfGSA~~~~enei---------tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TN 640 (752)
T KOG0670|consen 574 NILKLCDFGSASFASENEI---------TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTN 640 (752)
T ss_pred ceeeeccCccccccccccc---------cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCc
Confidence 5799999999987654332 223345689999999999999999999999999999999999976543
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2e-30 Score=248.20 Aligned_cols=215 Identities=26% Similarity=0.382 Sum_probs=174.5
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCC-ChhhHHHHHHHHHHHH-hcCCCceeeeecccccCCcE
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEG-SLQGEKEFLTEIQFLS-RLHHRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~-~l~h~nIv~l~~~~~~~~~~ 695 (956)
+.+..+.......||+|++|.|-+-++ .+|+..|+|++... ..+..++..+|+.+.. ...+|.+|.|+|.+..++..
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 445555566677899999999988874 58999999998753 3344567888888644 45799999999999999999
Q ss_pred EEEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecccc
Q 002178 696 MLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSR 773 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~ 773 (956)
++.||.| .-||+.+-.+ .....+++...-+||..+.+||.|||++-+ +||||+||+|||++.+|++|+||||.+-
T Consensus 121 wIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~--vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLS--VIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhh--hhhccCCcceEEEccCCcEEEcccccce
Confidence 9999999 4588776654 344568899999999999999999999764 9999999999999999999999999987
Q ss_pred ccCCCCCCCccccceecccccCCCccccccccc----CCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHH
Q 002178 774 LAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT----HKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNI 844 (956)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~ 844 (956)
.+.. +-..+...|...|||||.+.. ..|+-++||||+|+.+.||.+++.||.......+++..
T Consensus 198 ~L~d--------SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkq 264 (282)
T KOG0984|consen 198 YLVD--------SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQ 264 (282)
T ss_pred eehh--------hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHH
Confidence 6532 112233568889999999864 36889999999999999999999999876665555443
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=1e-28 Score=262.53 Aligned_cols=187 Identities=35% Similarity=0.548 Sum_probs=165.3
Q ss_pred CCeEEEEEEeC-CCcEEEEEEecCCChhh-HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHHHHHhh
Q 002178 636 GYGKVYKGILP-DGTVVAVKRAQEGSLQG-EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSA 713 (956)
Q Consensus 636 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~ 713 (956)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+||+++++++......++||||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999988655544 67899999999999999999999999998999999999999999999976
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccc
Q 002178 714 KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVK 793 (956)
Q Consensus 714 ~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~ 793 (956)
... +++..++.++.++++++.|||+.+ ++|+||+|+||++++++.++|+|||.+....... ......
T Consensus 81 ~~~--~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~ 147 (244)
T smart00220 81 RGR--LSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFV 147 (244)
T ss_pred ccC--CCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc--------cccccc
Confidence 443 788999999999999999999998 9999999999999999999999999998764321 223445
Q ss_pred cCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC
Q 002178 794 GTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG 835 (956)
Q Consensus 794 gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~ 835 (956)
++..|++||.+.+..++.++||||||++++++++|..||...
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~ 189 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGD 189 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 788999999999888999999999999999999999999653
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=277.02 Aligned_cols=242 Identities=22% Similarity=0.324 Sum_probs=200.0
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCC---hhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGS---LQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
.+++.+..||-|+||.|-++..+. ...+|+|++++.. ...++.+..|-++|...+.|.||++|..|.+.+..|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 455567789999999999988654 3358888877543 333456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPD 779 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~ 779 (956)
|-|-||.|+..+++++ .++....+.++..+.+|++|||+++ ||.|||||+|+++|.+|-+||.|||.|+.+..
T Consensus 500 EaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~-- 572 (732)
T KOG0614|consen 500 EACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS-- 572 (732)
T ss_pred HhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhcc--
Confidence 9999999999997654 5889999999999999999999999 99999999999999999999999999998753
Q ss_pred CCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
...+...+||+.|.|||++.....+.++|.||+|+++||+++|.+||...+.+..+..+.-. ++ .
T Consensus 573 ------g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkG-------id--~ 637 (732)
T KOG0614|consen 573 ------GRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKG-------ID--K 637 (732)
T ss_pred ------CCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhh-------hh--h
Confidence 34566789999999999999999999999999999999999999999876655433222110 00 1
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCC
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPS 887 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs 887 (956)
..+|......-.+++++.+..+|.+|-.
T Consensus 638 i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 2356666667777787777888888753
No 399
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1e-29 Score=277.39 Aligned_cols=210 Identities=22% Similarity=0.304 Sum_probs=173.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEe-CCCcEEEEEEecCCChhh---HHHHHHHHHHHHhcCCCceeeeecccccCCcEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGIL-PDGTVVAVKRAQEGSLQG---EKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLV 698 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV 698 (956)
..-|..++.||-|+||.|.++.. ++...+|.|.+.+...-. ...+..|-.+|.....+-||+||-.|++++.+|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 35566788999999999999984 457789999887654332 23457788999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC
Q 002178 699 YEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP 778 (956)
Q Consensus 699 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~ 778 (956)
|||++||++-.+|-+.+ .|.+..++.++..+..|+++.|..| +|||||||+|||||.+|.+||+|||++.-+...
T Consensus 708 MdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence 99999999999887643 5888889999999999999999999 999999999999999999999999998543221
Q ss_pred C---CCC------------------ccc--------------cceecccccCCCcccccccccCCCCCcccchhHHHHHH
Q 002178 779 D---IEG------------------IVP--------------AHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFL 823 (956)
Q Consensus 779 ~---~~~------------------~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ 823 (956)
. ++. ... ........||+.|+|||++....|+..+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 000 000 00112346999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCch
Q 002178 824 ELLTGMQPISHGKN 837 (956)
Q Consensus 824 elltg~~pf~~~~~ 837 (956)
||+.|+.||.....
T Consensus 863 em~~g~~pf~~~tp 876 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTP 876 (1034)
T ss_pred HHhhCCCCccCCCC
Confidence 99999999976544
No 400
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=257.85 Aligned_cols=246 Identities=22% Similarity=0.316 Sum_probs=198.4
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhc-CCCceeeeecccccCCc
Q 002178 620 ALATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRL-HHRNLVSLVGYCDEEGE 694 (956)
Q Consensus 620 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~~ 694 (956)
.+.-++|..+++||+|+|++|-.+.+. +.+.+|+|++++.-.. ....++.|-.+.... +||.+|.++.+|+.+..
T Consensus 246 ~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr 325 (593)
T KOG0695|consen 246 GLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR 325 (593)
T ss_pred ccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce
Confidence 345578999999999999999999964 6789999998864322 234566777777666 69999999999999999
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.++|.||++||+|--+++++. .+++..++.+...|.-||.|||++| ||.||||.+|||+|..|.+|++|+|+++.
T Consensus 326 lffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke 400 (593)
T KOG0695|consen 326 LFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKE 400 (593)
T ss_pred EEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhc
Confidence 999999999999987776654 4888999999999999999999999 99999999999999999999999999975
Q ss_pred cCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCC------chhHHHHHHHhhc
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHG------KNIVREVNIAYQS 848 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~------~~~~~~~~~~~~~ 848 (956)
-- .+.......+||+.|+|||++++..|..++|.|++||+++||+.|+.||.-. .+..+++
T Consensus 401 ~l-------~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedyl------ 467 (593)
T KOG0695|consen 401 GL-------GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYL------ 467 (593)
T ss_pred CC-------CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHH------
Confidence 32 2344566788999999999999999999999999999999999999999621 1112211
Q ss_pred ccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCC
Q 002178 849 SMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARP 886 (956)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RP 886 (956)
+.++-..-..+|...+-+...+.+..+++||.+|-
T Consensus 468 ---fqvilekqiriprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 468 ---FQVILEKQIRIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---HHHHhhhcccccceeehhhHHHHHHhhcCCcHHhc
Confidence 12222222345666666667777777888888763
No 401
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=9e-30 Score=277.09 Aligned_cols=290 Identities=27% Similarity=0.391 Sum_probs=203.2
Q ss_pred eeeEEEeCCCCccc-cCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCC-ccCCCcccceee
Q 002178 83 HLRELQLLNLNLSG-NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPE-ELGYLPKLDRIQ 160 (956)
Q Consensus 83 ~~~~L~L~~~~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 160 (956)
++++++++.|+|.. -+|+.+.+|..|+.||||+|+++ ..|..+..-+++-+|+||+|+|. .||. -|-+|+.|-.||
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhc
Confidence 45666666666654 36667777777777777777776 66767777777777777777776 4443 355677777777
Q ss_pred cccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccC-CCCCcccCCcchhhhhcccCCcCC
Q 002178 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLT-GYLPPELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (956)
||+|++. .+|..+..|..|++|+|++|.+...--..+..+++|+.|++++.+-+ .-+|.++..+.+|..+|||.|.+.
T Consensus 157 LS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp 235 (1255)
T KOG0444|consen 157 LSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP 235 (1255)
T ss_pred cccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC
Confidence 7777776 66666677777777777777665333333445566667777766544 456677777777777777777775
Q ss_pred CCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCcc-ccCEEEccCCcCCC-CCchhc
Q 002178 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTG-TIPSNF 317 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~-~~p~~~ 317 (956)
.+|+.+-++.+|+.|+||+|+|+........+.+|++|+||.|+|+ .+|+..+.. .|+.|++.+|+|+- -+|..+
T Consensus 236 --~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGI 312 (1255)
T KOG0444|consen 236 --IVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGI 312 (1255)
T ss_pred --cchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccch
Confidence 5677777777777777777777766666666667777777777777 666665544 67777777776643 467777
Q ss_pred CCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCC-CCCCcEEEecCCcc
Q 002178 318 SGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFN-IPPNVTVRLRGNPF 384 (956)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~~-~~~l~~l~l~~Np~ 384 (956)
+.|.+|+.+..++|+|. .+|+++..+.+| +.|.|+.|+|-++|.... ++.+..|++..||-
T Consensus 313 GKL~~Levf~aanN~LE-lVPEglcRC~kL-----~kL~L~~NrLiTLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 313 GKLIQLEVFHAANNKLE-LVPEGLCRCVKL-----QKLKLDHNRLITLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred hhhhhhHHHHhhccccc-cCchhhhhhHHH-----HHhcccccceeechhhhhhcCCcceeeccCCcC
Confidence 77777777777777776 777777665554 479999999999999885 78899999999984
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=6.5e-28 Score=261.97 Aligned_cols=196 Identities=25% Similarity=0.374 Sum_probs=168.5
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhH--------HHHHHHHHHHHhcC---CCceeeeeccccc
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGE--------KEFLTEIQFLSRLH---HRNLVSLVGYCDE 691 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--------~~~~~E~~~l~~l~---h~nIv~l~~~~~~ 691 (956)
..|.....+|.|+||.|+.|.++ +...|+||.+.+.+.-.. ..+-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45888999999999999999976 467899998876432211 23456999999997 9999999999999
Q ss_pred CCcEEEEEecC-CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeec
Q 002178 692 EGEQMLVYEFM-SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFG 770 (956)
Q Consensus 692 ~~~~~LV~e~~-~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfG 770 (956)
++.+||+||-. ++.+|.+++..+. .+++.+...|++||+.|+++||+.+ |||||||-+||.++.+|-+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeecc
Confidence 99999999975 5679999997654 4889999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCCC-CcccchhHHHHHHHHHhCCCCCC
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLT-DKSDVYSLGVVFLELLTGMQPIS 833 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDVwS~G~ll~elltg~~pf~ 833 (956)
.|...... ......||..|.|||++.+.+|- ..-|||++|++||.++....||.
T Consensus 716 saa~~ksg---------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSG---------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCC---------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99765422 23456799999999999998875 45899999999999999888885
No 403
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.94 E-value=4e-28 Score=263.50 Aligned_cols=292 Identities=22% Similarity=0.268 Sum_probs=229.6
Q ss_pred eeEEEeCCCCccccCCcCcCCC--CCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeec
Q 002178 84 LRELQLLNLNLSGNLSPEIGRL--SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 84 ~~~L~L~~~~l~~~~~~~l~~l--~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
...|+.+.+.|...--..+..+ +.-+.|||++|.++..-+..|.++++|+.++|..|.++ .+|...+...+|+.|+|
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L 132 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDL 132 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEee
Confidence 4456666666554322233222 34577999999999888889999999999999999999 89988888888999999
Q ss_pred ccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCC
Q 002178 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
.+|.|+..-.+.+..++.|+.|||+.|.|+...-..|..-.++++|+|++|+|+..-...|..+.+|..|.|+.|+++.
T Consensus 133 ~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNritt- 211 (873)
T KOG4194|consen 133 RHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITT- 211 (873)
T ss_pred eccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccc-
Confidence 9999998888999999999999999999996666778888999999999999998888999999999999999999984
Q ss_pred CCcccccCCCCCcEEeccCCCCccC-CCCCCCCCCccEEEccCCcCCcCCCCCCCc--cccCEEEccCCcCCCCCchhcC
Q 002178 242 TIPASYSNMSKLLKLSLRNCSLQGP-MPDLSRIPNLGYLDLSSNQLNGSIPPGRLS--LNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~--~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
..+..|+++++|+.|+|..|+|.-. .-.|..+++|+.|.|..|.+. .+.++.+- .++++|+|+.|+++..-..++-
T Consensus 212 Lp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lf 290 (873)
T KOG4194|consen 212 LPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDIS-KLDDGAFYGLEKMEHLNLETNRLQAVNEGWLF 290 (873)
T ss_pred cCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcc-cccCcceeeecccceeecccchhhhhhccccc
Confidence 4556899999999999999999765 335777788888888888777 55555442 2677777777777776677777
Q ss_pred CCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC-C-CCCCCcEEEecCCc
Q 002178 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS-F-NIPPNVTVRLRGNP 383 (956)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~-~-~~~~l~~l~l~~Np 383 (956)
+|+.|+.|+||+|.|+..-+++....++|+ +|||++|+|+.++.. + .+..+.+|.|++|.
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~WsftqkL~-----~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Ns 352 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSWSFTQKLK-----ELDLSSNRITRLDEGSFRVLSQLEELNLSHNS 352 (873)
T ss_pred ccchhhhhccchhhhheeecchhhhcccce-----eEeccccccccCChhHHHHHHHhhhhcccccc
Confidence 777777777777777766666665555443 677777777777654 2 25555666666665
No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.5e-25 Score=232.21 Aligned_cols=210 Identities=37% Similarity=0.605 Sum_probs=182.0
Q ss_pred eeeeCCeEEEEEEeCC-CcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHHH
Q 002178 632 IGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRD 709 (956)
Q Consensus 632 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~ 709 (956)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++|+++++++......++||||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999998865443 34678999999999999999999999999899999999999999999
Q ss_pred HHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-CCcEEEEeeccccccCCCCCCCccccce
Q 002178 710 QLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-KFTAKVADFGLSRLAPVPDIEGIVPAHV 788 (956)
Q Consensus 710 ~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~ 788 (956)
++.... ..+++..+..++.++++++.|||+.+ ++|+||+|.||+++. ++.++|+|||.+........ .
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 81 LLKENE-GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred HHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 997642 35889999999999999999999998 999999999999999 89999999999986543210 1
Q ss_pred ecccccCCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHH
Q 002178 789 STVVKGTPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECV 867 (956)
Q Consensus 789 ~~~~~gt~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 867 (956)
.....+...|++||..... .++.++|+|++|++++++
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------ 187 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------ 187 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------
Confidence 2334577899999999887 888999999999999998
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 868 EKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 868 ~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
..+.+++..|++.+|.+||++.++++.
T Consensus 188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 457788999999999999999988753
No 405
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=3.7e-29 Score=272.35 Aligned_cols=294 Identities=26% Similarity=0.367 Sum_probs=236.9
Q ss_pred eeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcc-cCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeec
Q 002178 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISG-SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 83 ~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~-~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+..|.+.+|+|. .+-.+++.|+.|+.+++..|++.. -||..+..+..|.+||||+|+++ +.|..+..-+++-.|+|
T Consensus 56 kLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNL 133 (1255)
T KOG0444|consen 56 KLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNL 133 (1255)
T ss_pred hhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEc
Confidence 4556667777665 344567777778888888887742 57777888888888888888887 77888888888888888
Q ss_pred ccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCC
Q 002178 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
|+|+|..+....|.+|+-|-.||||+|++. .+|+.+..+..|++|+|++|.+.-.--..+..+++|+.|.+++.+-+-.
T Consensus 134 S~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~ 212 (1255)
T KOG0444|consen 134 SYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLD 212 (1255)
T ss_pred ccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhh
Confidence 888888554455778888888888888887 6677777888888888888877644445566677788888887766545
Q ss_pred CCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCC-CCccccCEEEccCCcCCCCCchhcCCC
Q 002178 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG-RLSLNITTIKLSNNKLTGTIPSNFSGL 320 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~L~~L~Ls~N~l~~~~p~~~~~l 320 (956)
.+|.++..+.+|..+|||.|+|...|..+..+++|+.|+||+|+|+ .+... ....+|++|+||.|+|+ .+|.+++.|
T Consensus 213 N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL 290 (1255)
T KOG0444|consen 213 NIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKL 290 (1255)
T ss_pred cCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhh
Confidence 7899999999999999999999988888999999999999999998 44333 23348999999999999 899999999
Q ss_pred CcCCeEecccccCCC-cCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCcccc
Q 002178 321 PRLQRLFIANNSLSG-SIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 321 ~~L~~L~L~~N~l~~-~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~-~~~~l~~l~l~~Np~~c 386 (956)
++|+.|++.+|+|+- -||+.++++.+|. ++..++|+|.-+|..+ ..+.++.|.|+.|.+.-
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Le-----vf~aanN~LElVPEglcRC~kL~kL~L~~NrLiT 353 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLE-----VFHAANNKLELVPEGLCRCVKLQKLKLDHNRLIT 353 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhH-----HHHhhccccccCchhhhhhHHHHHhcccccceee
Confidence 999999999999984 4899999877765 8999999999999887 68888899998887643
No 406
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-28 Score=254.47 Aligned_cols=342 Identities=20% Similarity=0.219 Sum_probs=220.6
Q ss_pred CCCCCCCC---CceeecCCCC----CCCcceeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCccc
Q 002178 60 GDPCTSNW---TGVLCFNTTM----DDGYLHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSL 132 (956)
Q Consensus 60 ~~~c~~~w---~gv~C~~~~~----~~~~~~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L 132 (956)
+.+|.|+- .-|.|..... .+.+...++|+|..|+|+...+.+|+.+++|+.||||+|+|+.+-|.+|..+.+|
T Consensus 38 P~pC~Cs~~~g~~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l 117 (498)
T KOG4237|consen 38 PAPCTCSDVEGGIVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASL 117 (498)
T ss_pred CCCcccCCCCCceEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhh
Confidence 45676654 2388876543 2456778899999999998888899999999999999999998889999999887
Q ss_pred chhhccC-cCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccc
Q 002178 133 ELLLLNG-NELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDN 211 (956)
Q Consensus 133 ~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~ 211 (956)
..|-+.+ |+|+...-+.|++|..|+.|.+.-|++.-...+.|..+++|..|.|-+|.+...--..|..+.+++.+++..
T Consensus 118 ~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~ 197 (498)
T KOG4237|consen 118 LSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQ 197 (498)
T ss_pred hHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhc
Confidence 7776665 899977677899999999999999999988888899999999999999999844444888899999999998
Q ss_pred cccC------------CCCCcccCCcchhhhhcccCCcCCCCCCcccc-cCCCCCcEEeccCCCCccCCCC--CCCCCCc
Q 002178 212 NNLT------------GYLPPELSELPKLLILQLDNNNFEGTTIPASY-SNMSKLLKLSLRNCSLQGPMPD--LSRIPNL 276 (956)
Q Consensus 212 N~l~------------~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~--l~~l~~L 276 (956)
|.+. ...|.+++++.-..-..|.++++.. .-+..| ..+..+..--.+.+...++-|. |..+++|
T Consensus 198 np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q-~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L 276 (498)
T KOG4237|consen 198 NPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQ-EDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNL 276 (498)
T ss_pred CccccccccchhhhHHhhchhhcccceecchHHHHHHHhcc-cchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccc
Confidence 8843 1223334444444444444444432 111112 1111221111111222222221 5555555
Q ss_pred cEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEE
Q 002178 277 GYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILD 356 (956)
Q Consensus 277 ~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~ 356 (956)
+.|+|++|+|+ .+-+.+|.++..|++|.|..|+|...--..|..+ ..|..|+
T Consensus 277 ~~lnlsnN~i~-----------------------~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~l-----s~L~tL~ 328 (498)
T KOG4237|consen 277 RKLNLSNNKIT-----------------------RIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGL-----SGLKTLS 328 (498)
T ss_pred eEeccCCCccc-----------------------hhhhhhhcchhhhhhhhcCcchHHHHHHHhhhcc-----ccceeee
Confidence 55555555555 4444555555555555555555542222222222 2233455
Q ss_pred ccCCCCCCCCC-CC-CCCCCcEEEecCCcccccCCcccccCCCCCCCcccCcCCCCCCccccCcCCCCCccCCCCCCcce
Q 002178 357 FQNNNLTNISG-SF-NIPPNVTVRLRGNPFCLNTNAEQFCGSHSDDDNEIDRSTNSTLDCRAQSCPTDYEYSPTSPIRCF 434 (956)
Q Consensus 357 L~~N~L~~l~~-~~-~~~~l~~l~l~~Np~~c~c~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~c~~~~~~~p~~~~~~~ 434 (956)
|.+|+|+.+.. .| ....+.+|.|-.|||+|||.+.|+-+|++... ......|.+|.-..+...+......+.
T Consensus 329 L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~------~~~~~~Cq~p~~~~~~~~~dv~~~~~~ 402 (498)
T KOG4237|consen 329 LYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS------VVGNPRCQSPGFVRQIPISDVAFGDFR 402 (498)
T ss_pred ecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCC------CCCCCCCCCCchhccccchhccccccc
Confidence 55555555432 23 25566789999999999999999999998655 123345665544444444444455555
Q ss_pred ee
Q 002178 435 CA 436 (956)
Q Consensus 435 c~ 436 (956)
|.
T Consensus 403 c~ 404 (498)
T KOG4237|consen 403 CG 404 (498)
T ss_pred cC
Confidence 54
No 407
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.6e-27 Score=261.55 Aligned_cols=298 Identities=20% Similarity=0.284 Sum_probs=221.4
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.++|+...++|.|.||.||||++. .++..|||+++-.....-+-..+|+-+++.-+|+||+.++|.+...+..+++|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 467888999999999999999954 6899999999876555556677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE 781 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 781 (956)
|.+|+|.+..+. ..++++.++..+++..++||+|||+.+ =+|||||-.||++++.|.+|++|||.+-.+...
T Consensus 94 cgggslQdiy~~--TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitat--- 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITAT--- 165 (829)
T ss_pred cCCCcccceeee--cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhh---
Confidence 999999997754 457999999999999999999999999 799999999999999999999999998654321
Q ss_pred CccccceecccccCCCcccccccc---cCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCC
Q 002178 782 GIVPAHVSTVVKGTPGYLDPEYFL---THKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGN 858 (956)
Q Consensus 782 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 858 (956)
-.......||+.|||||+.. .+.|.+.+|||+.|+...|+-.-+.|.++-..+.. .+.. .....++.
T Consensus 166 ----i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~----l~Lm--TkS~~qpp 235 (829)
T KOG0576|consen 166 ----IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA----LFLM--TKSGFQPP 235 (829)
T ss_pred ----hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH----HHHh--hccCCCCC
Confidence 23345678999999999974 46799999999999999999887777654332211 1100 01112222
Q ss_pred CCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCC-ccCCCCCccc
Q 002178 859 MGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSS-SSMLKHPYVS 937 (956)
Q Consensus 859 ~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa-~e~L~HP~f~ 937 (956)
...-+..+.+.+.++++.|+-++|.+||+.+.+++. . +-..+.....+.++|.++=..+|.-|--- .|.=.++|+.
T Consensus 236 ~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h--~-fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~ 312 (829)
T KOG0576|consen 236 TLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH--P-FVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIP 312 (829)
T ss_pred cccCCccchHHHHHHHHHHhcCCCccCCChhhheec--e-eeccchhhHHHHHHHHHccCCCCcccccccCCcccccchh
Confidence 223356677888899999999999999998866541 1 11112233334455555544443333222 2222245554
Q ss_pred cCCC
Q 002178 938 SDVS 941 (956)
Q Consensus 938 ~~~~ 941 (956)
..+.
T Consensus 313 ~~i~ 316 (829)
T KOG0576|consen 313 MRIC 316 (829)
T ss_pred hhhh
Confidence 4444
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.93 E-value=2.4e-25 Score=233.96 Aligned_cols=199 Identities=36% Similarity=0.527 Sum_probs=172.6
Q ss_pred CCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCChh-hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCC
Q 002178 626 FNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ-GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
|...+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5567889999999999999764 899999999875554 56788999999999999999999999998899999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+++|.+++...... +++..+..++.+++.++.|||+.+ ++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~L~~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~---- 152 (225)
T smart00221 81 GGDLFDYLRKKGGK-LSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDL---- 152 (225)
T ss_pred CCCHHHHHHhcccC-CCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc----
Confidence 99999999764322 788999999999999999999998 9999999999999999999999999998764322
Q ss_pred cccceecccccCCCccccccc-ccCCCCCcccchhHHHHHHHHHhCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYF-LTHKLTDKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
........++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 153 --~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 153 --AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 0012334577889999998 667788899999999999999999999965
No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.5e-25 Score=223.04 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=186.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecc-cccCCcEEEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY-CDEEGEQMLVY 699 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~-~~~~~~~~LV~ 699 (956)
.+.|.+.+.+|+|.||.+-++.++ ..+.+|+|.+.... ...++|.+|...--.+ .|.||+.-|+. |+..+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 467888999999999999999976 57889999887533 3356899998754445 58999987765 67788999999
Q ss_pred ecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc--CCCcEEEEeeccccccCC
Q 002178 700 EFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD--HKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 700 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~--~~~~~kl~DfGla~~~~~ 777 (956)
||++.|+|.+-+... .+.+...++++.|++.|+.|+|+++ +||||||.+|||+- +..++||+|||..+..+.
T Consensus 102 E~aP~gdL~snv~~~---GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~ 175 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAA---GIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT 175 (378)
T ss_pred ccCccchhhhhcCcc---cccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccccCc
Confidence 999999999988553 4788889999999999999999999 99999999999993 334899999999875432
Q ss_pred CCCCCccccceecccccCCCcccccccccC-----CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHH--HHHHhhccc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-----KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVRE--VNIAYQSSM 850 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~--~~~~~~~~~ 850 (956)
. -....-+-.|.+||+.... ...+.+|||.||+++|.++||+.||+........ ....|+...
T Consensus 176 t----------V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk 245 (378)
T KOG1345|consen 176 T----------VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRK 245 (378)
T ss_pred e----------ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhccc
Confidence 1 1112244579999987542 3567899999999999999999999843221111 111122111
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
. ...+..-.-..+...++.++-+..++.+|-...++.++..
T Consensus 246 ~-----~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk 286 (378)
T KOG1345|consen 246 N-----PALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRK 286 (378)
T ss_pred C-----ccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHH
Confidence 1 1112112234567778888888999999966655555443
No 410
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.92 E-value=4.4e-27 Score=245.50 Aligned_cols=346 Identities=28% Similarity=0.386 Sum_probs=183.8
Q ss_pred cCCCCCCCHHHHHHHHHHHHhccCCCCC--C----CCCCCCCCCCCCCCceeecCCCCCCCcceeeEEEeCCCCccccCC
Q 002178 26 ADDDSITDPIEVSALRSIKKSLVDDYSK--L----SNWNRGDPCTSNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLS 99 (956)
Q Consensus 26 ~~~~~~~~~~~~~al~~~k~~~~~~~~~--l----~~W~~~~~c~~~w~gv~C~~~~~~~~~~~~~~L~L~~~~l~~~~~ 99 (956)
..+.....|.+...|.++|+-.+..... + -+-..--.|-|+.....|..... .....+..++..+|+++ .+|
T Consensus 76 ~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~s~n~~~el~~~i-~~~~~l~dl~~~~N~i~-slp 153 (565)
T KOG0472|consen 76 HDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLDCSSNELKELPDSI-GRLLDLEDLDATNNQIS-SLP 153 (565)
T ss_pred ccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhhccccceeecCchH-HHHhhhhhhhccccccc-cCc
Confidence 3444555677777777777554432111 1 01111122333344433322211 11123444555566665 455
Q ss_pred cCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCcccccccc
Q 002178 100 PEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNK 179 (956)
Q Consensus 100 ~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 179 (956)
+.+.++.+|..|++.+|++. ..|+..-+++.|++||+.+|-++ .+|..++.|.+|..|+|..|+|. ..| .|.+++.
T Consensus 154 ~~~~~~~~l~~l~~~~n~l~-~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~ 229 (565)
T KOG0472|consen 154 EDMVNLSKLSKLDLEGNKLK-ALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSL 229 (565)
T ss_pred hHHHHHHHHHHhhccccchh-hCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHH
Confidence 55666666666666666665 33333333556666666665555 55555666666666666666655 444 5555555
Q ss_pred CCeeecccCcCCCCCccccC-CCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEec
Q 002178 180 TRHFHMNNNSISGQIPPELS-RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSL 258 (956)
Q Consensus 180 L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~L 258 (956)
|++|+++.|+|. .+|.... ++++|..|||.+|+++ ..|+.+.-+.+|++||+|+|.|++ +|.+++++ .|+.|-+
T Consensus 230 L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is~--Lp~sLgnl-hL~~L~l 304 (565)
T KOG0472|consen 230 LKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDISS--LPYSLGNL-HLKFLAL 304 (565)
T ss_pred HHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCcccc--CCcccccc-eeeehhh
Confidence 555555555555 3343332 5555555555555555 455555555555555555555552 45555555 5555555
Q ss_pred cCCCCc-----------------------------------------------------------------cCCCCC---
Q 002178 259 RNCSLQ-----------------------------------------------------------------GPMPDL--- 270 (956)
Q Consensus 259 s~N~l~-----------------------------------------------------------------~~~~~l--- 270 (956)
.+|.+. ..|.+.
T Consensus 305 eGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea 384 (565)
T KOG0472|consen 305 EGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEA 384 (565)
T ss_pred cCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHH
Confidence 555442 110000
Q ss_pred CCCCCccEEEccCCcCCcCCCCC------------------------CCc-cccCEEEccCCcCCCCCchhcCCCCcCCe
Q 002178 271 SRIPNLGYLDLSSNQLNGSIPPG------------------------RLS-LNITTIKLSNNKLTGTIPSNFSGLPRLQR 325 (956)
Q Consensus 271 ~~l~~L~~L~Ls~N~l~~~~p~~------------------------~~~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 325 (956)
..-.-....+++.|++. ++|.. ... .+|..|+|++|-+. .+|..++.+..|+.
T Consensus 385 ~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~ 462 (565)
T KOG0472|consen 385 AKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQT 462 (565)
T ss_pred hhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhhe
Confidence 00001334444444444 33321 111 15666666666665 55666666666666
Q ss_pred EecccccCCCcCChhhhhhcc-------------------CCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCccc
Q 002178 326 LFIANNSLSGSIPSSIWQSRT-------------------LNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFC 385 (956)
Q Consensus 326 L~L~~N~l~~~~p~~~~~l~~-------------------l~~~~L~~L~L~~N~L~~l~~~~-~~~~l~~l~l~~Np~~ 385 (956)
||++.|++. .+|..+..+.. .++.+|..|||++|.|..+|... .+.+++.|.+.||||.
T Consensus 463 LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 463 LNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 666666654 44443321111 12344669999999999999988 5899999999999986
No 411
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.91 E-value=7e-27 Score=243.98 Aligned_cols=263 Identities=28% Similarity=0.446 Sum_probs=165.8
Q ss_pred eeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeeccc
Q 002178 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (956)
Q Consensus 84 ~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 163 (956)
+..+.+++|.+. .+.+.+.+|..|.+|++.+|+++ ..|.+++.+..++.|+.|+|+++ .+|.+++.+.+|..|+.++
T Consensus 47 l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~ 123 (565)
T KOG0472|consen 47 LQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSS 123 (565)
T ss_pred hhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccc
Confidence 345566666655 34455666666666666666666 56666666666666666666666 6666666666666666666
Q ss_pred ccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCC
Q 002178 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (956)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (956)
|.+. .+|+.++.+-.|..++..+|+++ . .|+.+..+.+|..|++.+|.++ ..
T Consensus 124 n~~~-el~~~i~~~~~l~dl~~~~N~i~-s------------------------lp~~~~~~~~l~~l~~~~n~l~--~l 175 (565)
T KOG0472|consen 124 NELK-ELPDSIGRLLDLEDLDATNNQIS-S------------------------LPEDMVNLSKLSKLDLEGNKLK--AL 175 (565)
T ss_pred ccee-ecCchHHHHhhhhhhhccccccc-c------------------------CchHHHHHHHHHHhhccccchh--hC
Confidence 6665 44444555555555555555554 3 4444444555555555555554 23
Q ss_pred cccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchh-cCCCCc
Q 002178 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSN-FSGLPR 322 (956)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~l~~ 322 (956)
|...-+++.|++||.-.|-++..|++++.+.+|+.|+|..|+|. .+|+......|++|+++.|+|+ .+|.. ..+|++
T Consensus 176 ~~~~i~m~~L~~ld~~~N~L~tlP~~lg~l~~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~ 253 (565)
T KOG0472|consen 176 PENHIAMKRLKHLDCNSNLLETLPPELGGLESLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIE-MLPAEHLKHLNS 253 (565)
T ss_pred CHHHHHHHHHHhcccchhhhhcCChhhcchhhhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHH-hhHHHHhccccc
Confidence 33333355555555555555555555555555555555555555 5554444445666666666666 44444 448999
Q ss_pred CCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCCCCCCCcEEEecCCccc
Q 002178 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSFNIPPNVTVRLRGNPFC 385 (956)
Q Consensus 323 L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~~~~~l~~l~l~~Np~~ 385 (956)
|..|||.+|+++ ++|..+..+++|+ .||+|+|.++++|.++.--.++.|-+.|||..
T Consensus 254 l~vLDLRdNklk-e~Pde~clLrsL~-----rLDlSNN~is~Lp~sLgnlhL~~L~leGNPlr 310 (565)
T KOG0472|consen 254 LLVLDLRDNKLK-EVPDEICLLRSLE-----RLDLSNNDISSLPYSLGNLHLKFLALEGNPLR 310 (565)
T ss_pred ceeeeccccccc-cCchHHHHhhhhh-----hhcccCCccccCCcccccceeeehhhcCCchH
Confidence 999999999998 8888888777665 89999999999998885338888999999964
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.90 E-value=1.5e-24 Score=215.41 Aligned_cols=247 Identities=17% Similarity=0.346 Sum_probs=197.6
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCC--ChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCC
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEG--SLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGT 706 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gs 706 (956)
..+|.+...|..|+|+|+. ..+++|+++.. .....++|..|.-.++.+.||||..++|.|.......++..||+.|+
T Consensus 195 ~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gs 273 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG-NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGS 273 (448)
T ss_pred hhhhccCCCcccccccccC-cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchH
Confidence 3468899999999999964 45566766532 23334689999999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcccc
Q 002178 707 LRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPA 786 (956)
Q Consensus 707 L~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 786 (956)
|+..+++......+..++.+++.+||+|++|||+.. +-|-.--|.+..|++|++.+++|+ .+-+++ +
T Consensus 274 lynvlhe~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltaris-mad~kf-----------s 340 (448)
T KOG0195|consen 274 LYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARIS-MADTKF-----------S 340 (448)
T ss_pred HHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhhee-ccccee-----------e
Confidence 999999988878899999999999999999999975 334455689999999999998875 111111 1
Q ss_pred ceecccccCCCcccccccccCCC---CCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 787 HVSTVVKGTPGYLDPEYFLTHKL---TDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 787 ~~~~~~~gt~~y~aPE~~~~~~~---~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
.......-.+.||+||.+...+- -.++|+|||++++||+.|...||.+-.++.--. .-.+++.+..+|
T Consensus 341 fqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm---------kialeglrv~ip 411 (448)
T KOG0195|consen 341 FQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM---------KIALEGLRVHIP 411 (448)
T ss_pred eeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh---------hhhhccccccCC
Confidence 11122334679999999987553 347899999999999999999998655433222 223455566788
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 864 SECVEKFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
+..+..+.+++.-|.+.||.+||.++.++-.||++
T Consensus 412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 99999999999999999999999999999988875
No 413
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.90 E-value=2.2e-24 Score=268.19 Aligned_cols=201 Identities=18% Similarity=0.173 Sum_probs=135.6
Q ss_pred hcCC-Cceeeeeccc-------ccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEe
Q 002178 676 RLHH-RNLVSLVGYC-------DEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVF 747 (956)
Q Consensus 676 ~l~h-~nIv~l~~~~-------~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 747 (956)
.++| +||++++++| .+.+..+.++||+ +++|.+++... ...+++.+++.++.||++||+|||+++ |+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---Iv 102 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQG---IV 102 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCC---ee
Confidence 3445 5888888887 2334677888988 67999999653 345899999999999999999999999 99
Q ss_pred ccCCCcccEEEcCCCcE-------------------EEEeeccccccCCCCC---------CCccccceecccccCCCcc
Q 002178 748 HRDIKASNILLDHKFTA-------------------KVADFGLSRLAPVPDI---------EGIVPAHVSTVVKGTPGYL 799 (956)
Q Consensus 748 H~Dlk~~NILl~~~~~~-------------------kl~DfGla~~~~~~~~---------~~~~~~~~~~~~~gt~~y~ 799 (956)
||||||+|||++..+.+ |++|||+++....... .............||+.||
T Consensus 103 HrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 182 (793)
T PLN00181 103 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYT 182 (793)
T ss_pred eccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceE
Confidence 99999999999665554 4555555543210000 0000000111245888999
Q ss_pred cccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcc
Q 002178 800 DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQ 879 (956)
Q Consensus 800 aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~ 879 (956)
|||++.+..++.++|||||||++|||++|..|+............ .. .+............++.+|++
T Consensus 183 APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~L~ 250 (793)
T PLN00181 183 SPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRH--------RV----LPPQILLNWPKEASFCLWLLH 250 (793)
T ss_pred ChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHH--------hh----cChhhhhcCHHHHHHHHHhCC
Confidence 999999999999999999999999999998876432111111100 00 111111122334566777888
Q ss_pred cCCCCCCCHHHHHH
Q 002178 880 DETDARPSMSEVMR 893 (956)
Q Consensus 880 ~~p~~RPs~~~v~~ 893 (956)
.+|.+||++.++++
T Consensus 251 ~~P~~Rps~~eil~ 264 (793)
T PLN00181 251 PEPSCRPSMSELLQ 264 (793)
T ss_pred CChhhCcChHHHhh
Confidence 88888888887764
No 414
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=1.8e-22 Score=204.04 Aligned_cols=167 Identities=22% Similarity=0.285 Sum_probs=125.2
Q ss_pred CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCcc
Q 002178 705 GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIV 784 (956)
Q Consensus 705 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 784 (956)
|||.++++.+ ..++++..++.|+.||++||+|||+++ ||+||+++.++.+|+ ||.++.....
T Consensus 1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc------
Confidence 7899999754 346999999999999999999999876 999999999999999 9998765321
Q ss_pred ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCCh
Q 002178 785 PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPS 864 (956)
Q Consensus 785 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (956)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.................. . ........+.
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~ 133 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP--A-DDPRDRSNLE 133 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc--c-CCccccccHH
Confidence 125889999999999999999999999999999999999999654332222211110000 0 0000011223
Q ss_pred HHHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHHh
Q 002178 865 ECVE--KFIKLALKCCQDETDARPSMSEVMRELESI 898 (956)
Q Consensus 865 ~~~~--~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~ 898 (956)
.... .+.+++.+|+..+|.+||++.++++.+...
T Consensus 134 ~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 134 SVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 3333 588888889999999999988888877654
No 415
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.8e-22 Score=222.88 Aligned_cols=172 Identities=19% Similarity=0.204 Sum_probs=132.0
Q ss_pred HHHhcCCCCCCeeeeeCCeEEEEEEeC--CCcEEEEEEecCC-----ChhhHHHHHHHHHHHHhcCCCceee-eeccccc
Q 002178 620 ALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEG-----SLQGEKEFLTEIQFLSRLHHRNLVS-LVGYCDE 691 (956)
Q Consensus 620 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~nIv~-l~~~~~~ 691 (956)
....++|.+.+.||+|+||+||+|.++ +++.||||++... .....+.+.+|++++++++|+|+++ ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 345678999999999999999999864 5788899986532 1223457899999999999999985 5442
Q ss_pred CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCC-CcccEEEcCCCcEEEEeec
Q 002178 692 EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFG 770 (956)
Q Consensus 692 ~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-k~~NILl~~~~~~kl~DfG 770 (956)
+..++||||++|++|.. +... . ...++.++++||.|||+.+ |+|||| ||+|||++.++.+||+|||
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~~~-----~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-ARPH-----G---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hCcc-----c---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECc
Confidence 46799999999999973 2111 1 1457889999999999999 999999 9999999999999999999
Q ss_pred cccccCCCCCCCcccc-ceecccccCCCcccccccccC
Q 002178 771 LSRLAPVPDIEGIVPA-HVSTVVKGTPGYLDPEYFLTH 807 (956)
Q Consensus 771 la~~~~~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~ 807 (956)
+|+............. .......++..|+|||.+...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9997754332111111 111356788899999998643
No 416
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.2e-21 Score=217.62 Aligned_cols=265 Identities=21% Similarity=0.267 Sum_probs=199.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeCC--CcEEEEEEecCCChhhHHHHHHHHHHHHhcCC----Cceeeeeccc-ccCCcEEE
Q 002178 625 NFNSSTQIGQGGYGKVYKGILPD--GTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH----RNLVSLVGYC-DEEGEQML 697 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~nIv~l~~~~-~~~~~~~L 697 (956)
+|.+.++||+|+||.||++.... ...+|+|............+..|..++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 79999999999999999999654 35789998765433332367778888888863 6888999888 57788999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-----CcEEEEeeccc
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-----FTAKVADFGLS 772 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-----~~~kl~DfGla 772 (956)
||+.+ |.+|.++........++..+...|+.|++.+|+++|+.| ++||||||.|+++... ..+.|.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99988 899999887666677999999999999999999999999 9999999999999765 46999999999
Q ss_pred cccC--CCCCCCccccce-ecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHH--HHHHHhh
Q 002178 773 RLAP--VPDIEGIVPAHV-STVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR--EVNIAYQ 847 (956)
Q Consensus 773 ~~~~--~~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~--~~~~~~~ 847 (956)
+... ........+... .....||..|.++....+...+.+.|+||++.++.|++.|..||........ .......
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~ 254 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR 254 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence 8332 222111111111 2345699999999999999999999999999999999999999965442211 1111100
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhh
Q 002178 848 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNM 901 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~ 901 (956)
. ..... .....+..+.++...+-..+...+|....+...++.....
T Consensus 255 ~----~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 255 K----LLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred h----hcccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 0 00000 2223345566666666668999999999999888776554
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.88 E-value=3.7e-22 Score=237.19 Aligned_cols=256 Identities=27% Similarity=0.335 Sum_probs=206.7
Q ss_pred eeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeeccc
Q 002178 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (956)
Q Consensus 84 ~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 163 (956)
-..|+|++++|+ .+|+.+. .+|+.|+|++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~ 271 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFS 271 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccC
Confidence 346899999998 6788776 48999999999999 57742 579999999999999 56653 46899999999
Q ss_pred ccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCC
Q 002178 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (956)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (956)
|.|+ .+|..+ ++|+.|+|++|+|+ .+|.. +++|+.|+|++|+|++ +|... .+|+.|++++|.+++ +
T Consensus 272 N~L~-~Lp~lp---~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~--L 337 (788)
T PRK15387 272 NPLT-HLPALP---SGLCKLWIFGNQLT-SLPVL---PPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS--L 337 (788)
T ss_pred Cchh-hhhhch---hhcCEEECcCCccc-ccccc---ccccceeECCCCcccc-CCCCc---ccccccccccCcccc--c
Confidence 9998 455433 57889999999998 55653 4789999999999996 44422 468899999999984 5
Q ss_pred cccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCCCcC
Q 002178 244 PASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRL 323 (956)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L 323 (956)
|.. ..+|+.|+|++|+|++.++. ..+|+.|++++|+|+ .+|... .+|+.|+|++|+|++ +|.. .++|
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~-~LP~l~--~~L~~LdLs~N~Lt~-LP~l---~s~L 404 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLT-SLPALP--SGLKELIVSGNRLTS-LPVL---PSEL 404 (788)
T ss_pred ccc---ccccceEecCCCccCCCCCC---Ccccceehhhccccc-cCcccc--cccceEEecCCcccC-CCCc---ccCC
Confidence 542 25899999999999986653 357889999999999 577543 479999999999995 5543 3679
Q ss_pred CeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecCCcccc
Q 002178 324 QRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 324 ~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~-~~~~l~~l~l~~Np~~c 386 (956)
+.|++++|+|++ +|... ..|+.|+|++|+|+.+|..+ .++.+..|+|++||+..
T Consensus 405 ~~LdLS~N~Lss-IP~l~--------~~L~~L~Ls~NqLt~LP~sl~~L~~L~~LdLs~N~Ls~ 459 (788)
T PRK15387 405 KELMVSGNRLTS-LPMLP--------SGLLSLSVYRNQLTRLPESLIHLSSETTVNLEGNPLSE 459 (788)
T ss_pred CEEEccCCcCCC-CCcch--------hhhhhhhhccCcccccChHHhhccCCCeEECCCCCCCc
Confidence 999999999984 67543 24567999999999999887 58899999999999875
No 418
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.87 E-value=6.7e-24 Score=243.05 Aligned_cols=186 Identities=24% Similarity=0.330 Sum_probs=118.5
Q ss_pred ccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCCC-C--
Q 002178 195 PPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDL-S-- 271 (956)
Q Consensus 195 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l-~-- 271 (956)
|++++.+.+|+.|...+|+|+ .+|..+....+|+.|.+..|.++ .+|.....++.|++|+|..|+|...++.+ .
T Consensus 257 p~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~--yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~ 333 (1081)
T KOG0618|consen 257 PEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE--YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVL 333 (1081)
T ss_pred hHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh--hCCCcccccceeeeeeehhccccccchHHHhhh
Confidence 344444445555555555543 34444444445555555555554 35555556666666666666665544321 0
Q ss_pred -----------------------CCCCccEEEccCCcCCcC-CCCCCCccccCEEEccCCcCCCCCchhcCCCCcCCeEe
Q 002178 272 -----------------------RIPNLGYLDLSSNQLNGS-IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLF 327 (956)
Q Consensus 272 -----------------------~l~~L~~L~Ls~N~l~~~-~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 327 (956)
.++.|+.|.+.+|.|+.. +|......+|+.|+|++|+|.......+.+|..|++|+
T Consensus 334 ~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~ 413 (1081)
T KOG0618|consen 334 NASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELN 413 (1081)
T ss_pred hHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHh
Confidence 112345555555555532 23333444788899999988866667788888999999
Q ss_pred cccccCCCcCChhhhhhccC-----------------CCCcceEEEccCCCCCCCCC--CCCCCCCcEEEecCCcc
Q 002178 328 IANNSLSGSIPSSIWQSRTL-----------------NATETFILDFQNNNLTNISG--SFNIPPNVTVRLRGNPF 384 (956)
Q Consensus 328 L~~N~l~~~~p~~~~~l~~l-----------------~~~~L~~L~L~~N~L~~l~~--~~~~~~l~~l~l~~Np~ 384 (956)
||||+|+ .+|..+..+..| +++.|+.+|||.|+|+.+-. ....|+|+.|+++||+|
T Consensus 414 LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 414 LSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFPELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred cccchhh-hhhHHHHhhhhhHHHhhcCCceeechhhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 9999988 677766544333 56778999999999997544 44568999999999997
No 419
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.87 E-value=1.2e-21 Score=234.80 Aligned_cols=247 Identities=26% Similarity=0.443 Sum_probs=197.9
Q ss_pred CCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeec
Q 002178 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (956)
Q Consensus 106 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (956)
.+...|+|++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. ++|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45789999999998 5776664 57999999999999 6676654 58999999999998 5666553 47999999
Q ss_pred ccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCcc
Q 002178 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQG 265 (956)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 265 (956)
++|++. .+|..+. .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|+++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~--LP~~lp--~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT--LPAHLP--SGITHLNVQSNSLTA 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc--Ccccch--hhHHHHHhcCCcccc
Confidence 999998 6777664 58999999999999 4676664 589999999999984 555443 478999999999997
Q ss_pred CCCCCCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhhhhhc
Q 002178 266 PMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSR 345 (956)
Q Consensus 266 ~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 345 (956)
.+..+. ++|+.|++++|.++ .+|.... .+|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+..
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt-~LP~~l~-~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~~-- 388 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALT-SLPASLP-PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLPA-- 388 (754)
T ss_pred CCcccc--ccceeccccCCccc-cCChhhc-CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHHH--
Confidence 665443 68999999999998 4675443 58999999999998 4676553 68999999999999 56766532
Q ss_pred cCCCCcceEEEccCCCCCCCCCCC-----CCCCCcEEEecCCcccc
Q 002178 346 TLNATETFILDFQNNNLTNISGSF-----NIPPNVTVRLRGNPFCL 386 (956)
Q Consensus 346 ~l~~~~L~~L~L~~N~L~~l~~~~-----~~~~l~~l~l~~Np~~c 386 (956)
.|+.|++++|+|+.+|..+ ..+.+..+++.+||+..
T Consensus 389 -----sL~~LdLs~N~L~~LP~sl~~~~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 389 -----ALQIMQASRNNLVRLPESLPHFRGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred -----HHHHHhhccCCcccCchhHHHHhhcCCCccEEEeeCCCccH
Confidence 4678999999999998764 24778899999999874
No 420
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=5.9e-21 Score=195.74 Aligned_cols=272 Identities=19% Similarity=0.275 Sum_probs=207.5
Q ss_pred CCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEecC
Q 002178 625 NFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.|.+.++||+|.||..+.|+ +-++++||||.-...+ ...++..|.+.++.|. .+.|...+-+-.++.+-.||+|.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 68899999999999999998 5589999999765433 2346778999888884 789999988888888999999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-----CCcEEEEeeccccccCC
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-----KFTAKVADFGLSRLAPV 777 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-----~~~~kl~DfGla~~~~~ 777 (956)
|.||.|++.-. ...++..++..+|.|++.-++|+|++. .|.|||||+|.||.. ...+.++|||+|+.+..
T Consensus 107 -GPSLEDLFD~C-gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 107 -GPSLEDLFDLC-GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred -CcCHHHHHHHh-cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 89999988643 446999999999999999999999999 999999999999964 34699999999999887
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc--hhHHHHHHHhhcccchhhc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK--NIVREVNIAYQSSMMFSVI 855 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~--~~~~~~~~~~~~~~~~~~~ 855 (956)
++...-.+.+......||.+||+--...+.+.+.+.|+-|+|-++.+.+-|..||..-. ...+..+..-+..... .+
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T-~i 260 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRST-PI 260 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccC-CH
Confidence 77655555566677889999999999999999999999999999999999999998532 2222222111111000 00
Q ss_pred cCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCC
Q 002178 856 DGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTK 908 (956)
Q Consensus 856 ~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~ 908 (956)
+ ..-+..+.++..-+..--..+-++-|..+-+...+.+.++..-+.++.
T Consensus 261 ~----~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg 309 (449)
T KOG1165|consen 261 E----VLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDG 309 (449)
T ss_pred H----HHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccc
Confidence 0 011223445555555555667778888888777777776655544443
No 421
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=3.4e-23 Score=243.63 Aligned_cols=262 Identities=21% Similarity=0.278 Sum_probs=189.5
Q ss_pred CCCeeeeeCCeEEEEEEeC-CCcEEEEEEec----C-CCh-hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 628 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQ----E-GSL-QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~----~-~~~-~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
..+.+|.|++|.|+..... .....+.|.+. . ... .....+..|+-+-..++|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 3578999999988877643 34444444332 1 111 112235667888888999999988888877776666799
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
||++ +|...+... ..+...++..+.+|+..|++|+|+.| |.|||+|++|++++.+|.+||+|||.+.....+..
T Consensus 402 ~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9998 999998664 34777888899999999999999999 99999999999999999999999999987654432
Q ss_pred CCccccceecccccCCCcccccccccCCCCCc-ccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCC
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDK-SDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNM 859 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (956)
. .........|+..|+|||++.+..|+.. .||||.|+++..|.+|+.||........... ...
T Consensus 476 ~---~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~---------~~~---- 539 (601)
T KOG0590|consen 476 K---NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK---------TNN---- 539 (601)
T ss_pred h---hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh---------hhc----
Confidence 1 1245567789999999999999999875 8999999999999999999964332111100 000
Q ss_pred CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCCCCccccC
Q 002178 860 GSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLKHPYVSSD 939 (956)
Q Consensus 860 ~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~HP~f~~~ 939 (956)
...+| .+....+.+...+|. .....|.+||++||.+|+|++++++++||++-
T Consensus 540 ---------------------~~~~~----~~~~~~~~~~~~lp~---~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 540 ---------------------YSDQR----NIFEGPNRLLSLLPR---ETRIIIYRMLQLDPTKRITIEQILNDEWIRSI 591 (601)
T ss_pred ---------------------ccccc----ccccChHHHHHhchh---hHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence 00000 000011111111121 12357889999999999999999999999753
No 422
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.7e-21 Score=191.26 Aligned_cols=269 Identities=20% Similarity=0.277 Sum_probs=204.0
Q ss_pred hcCCCCCCeeeeeCCeEEEEEE-eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC-CceeeeecccccCCcEEEEEe
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGI-LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH-RNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~nIv~l~~~~~~~~~~~LV~e 700 (956)
.++|.+.++||.|+||.+|.|. ..+|..||||+-..... ...+..|.++.+.+++ ..|..+..|..+...-.+|||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4689999999999999999999 67899999998764332 2367789999999974 677788888888999999999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC---CCcEEEEeeccccccCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH---KFTAKVADFGLSRLAPV 777 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~---~~~~kl~DfGla~~~~~ 777 (956)
.+ |.||.+++.-. ...++..+++-+|-|++.-++|+|.++ +|||||||+|.|..- ...+.++|||+|+.+-.
T Consensus 92 LL-GPsLEdLfnfC-~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFC-SRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cc-CccHHHHHHHH-hhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 99 89999988543 345899999999999999999999999 999999999999953 35799999999988755
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHH-HHHHHhhcccchhhcc
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVR-EVNIAYQSSMMFSVID 856 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 856 (956)
.....-.+........||.+|.+--...+...+.+.|+-|+|.++...--|..||+.-....+ +......+..+...+.
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie 246 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIE 246 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHH
Confidence 443333344455667899999998888888888899999999999999999999986432211 1111111111100010
Q ss_pred CCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhC
Q 002178 857 GNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 857 ~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~ 902 (956)
..-...+.++.-.+..|-...-++.|...-+-+.+..++..+
T Consensus 247 ----~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~l 288 (341)
T KOG1163|consen 247 ----VLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTL 288 (341)
T ss_pred ----HHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhc
Confidence 112334566777778888888888898887777666555443
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=1.7e-20 Score=224.72 Aligned_cols=251 Identities=26% Similarity=0.409 Sum_probs=203.1
Q ss_pred eeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecc
Q 002178 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQID 162 (956)
Q Consensus 83 ~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 162 (956)
+.+.|++.+++++. +|..+. ++|+.|+|++|+|+ .+|..+. ++|++|+|++|+|+ .+|..+. .+|+.|+|+
T Consensus 179 ~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls 249 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELS 249 (754)
T ss_pred CceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECc
Confidence 36789999998884 566554 58999999999999 6777664 58999999999999 6777654 589999999
Q ss_pred cccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCC
Q 002178 163 QNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTT 242 (956)
Q Consensus 163 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 242 (956)
+|++. .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++ +|..+. ++|+.|+|++|.++.
T Consensus 250 ~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-- 318 (754)
T PRK15370 250 INRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-- 318 (754)
T ss_pred CCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc--
Confidence 99998 6777664 58999999999999 5777664 589999999999995 565553 589999999999984
Q ss_pred CcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCCCc
Q 002178 243 IPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPR 322 (956)
Q Consensus 243 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~ 322 (956)
+|..+. ++|+.|++++|.+++.+..+. ++|+.|+|++|+|+ .+|... ..+|+.|+|++|+|+. +|..+. ..
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~-~LP~~l-p~~L~~LdLs~N~Lt~-LP~~l~--~s 389 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQIT-VLPETL-PPTITTLDVSRNALTN-LPENLP--AA 389 (754)
T ss_pred CCcccc--ccceeccccCCccccCChhhc--CcccEEECCCCCCC-cCChhh-cCCcCEEECCCCcCCC-CCHhHH--HH
Confidence 555443 689999999999998766554 69999999999998 677644 3589999999999994 565554 37
Q ss_pred CCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCC
Q 002178 323 LQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (956)
Q Consensus 323 L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~ 364 (956)
|+.|++++|+|+ .+|..+..+.. ..+.+..|+|.+|.|+.
T Consensus 390 L~~LdLs~N~L~-~LP~sl~~~~~-~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 390 LQIMQASRNNLV-RLPESLPHFRG-EGPQPTRIIVEYNPFSE 429 (754)
T ss_pred HHHHhhccCCcc-cCchhHHHHhh-cCCCccEEEeeCCCccH
Confidence 999999999998 67877655433 23567799999999873
No 424
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83 E-value=3e-19 Score=198.48 Aligned_cols=257 Identities=31% Similarity=0.493 Sum_probs=196.9
Q ss_pred CCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCC-ceeeeecccccCCcEEEEEec
Q 002178 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHR-NLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~-nIv~l~~~~~~~~~~~LV~e~ 701 (956)
|.....||.|+||.||++... ..+++|.+...... ....+.+|+..++.+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667788999999999999976 78899988754332 356889999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhhcCC-CCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC-cEEEEeeccccccCCCC
Q 002178 702 MSNGTLRDQLSAKSK-EPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLAPVPD 779 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~~~~~ 779 (956)
+.++++.+++..... ..+.......+..|++.++.|+|+.+ ++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977755432 25888899999999999999999999 99999999999999988 79999999998554332
Q ss_pred CCCccccceecccccCCCccccccccc---CCCCCcccchhHHHHHHHHHhCCCCCCCCch---hHHHHHHHhhcccchh
Q 002178 780 IEGIVPAHVSTVVKGTPGYLDPEYFLT---HKLTDKSDVYSLGVVFLELLTGMQPISHGKN---IVREVNIAYQSSMMFS 853 (956)
Q Consensus 780 ~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~sDVwS~G~ll~elltg~~pf~~~~~---~~~~~~~~~~~~~~~~ 853 (956)
..... ........|+..|+|||.+.+ ..+....|+||+|++++++++|..||..... ............
T Consensus 157 ~~~~~-~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---- 231 (384)
T COG0515 157 STSSI-PALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELP---- 231 (384)
T ss_pred ccccc-cccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcC----
Confidence 11000 013456679999999999988 5788899999999999999999999765442 112111111110
Q ss_pred hccC-CCCCCC----hHHHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 002178 854 VIDG-NMGSYP----SECVEKFIKLALKCCQDETDARPSMSEVMRE 894 (956)
Q Consensus 854 ~~~~-~~~~~~----~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~ 894 (956)
.+ ...... ......+.+++..|+..+|..|.+..+....
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 232 --TPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred --CcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00 001111 2223577888899999999999988876654
No 425
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=4.7e-20 Score=219.40 Aligned_cols=239 Identities=26% Similarity=0.310 Sum_probs=188.7
Q ss_pred ceeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeec
Q 002178 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
.+++.|++.+|+|+. +|. .+++|++|+|++|+|+ .+|.. .++|+.|+|++|.++ .+|..+ ++|+.|+|
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp---~~L~~L~L 289 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALP---SGLCKLWI 289 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhch---hhcCEEEC
Confidence 478999999999985 443 2588999999999999 56743 468999999999998 566533 67889999
Q ss_pred ccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCC
Q 002178 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGT 241 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ 241 (956)
++|+|+ .+|. .+++|+.|+|++|+|++ +|... .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++
T Consensus 290 s~N~Lt-~LP~---~p~~L~~LdLS~N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~- 356 (788)
T PRK15387 290 FGNQLT-SLPV---LPPGLQELSVSDNQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS- 356 (788)
T ss_pred cCCccc-cccc---cccccceeECCCCcccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-
Confidence 999998 4554 34789999999999995 55432 468889999999985 5532 2579999999999984
Q ss_pred CCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCCC
Q 002178 242 TIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLP 321 (956)
Q Consensus 242 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~ 321 (956)
+|.. ..+|+.|++++|+|+..+.. ..+|+.|+|++|+|+ .+|... .+|+.|++++|+|+. +|.. ..
T Consensus 357 -LP~l---p~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt-~LP~l~--s~L~~LdLS~N~Lss-IP~l---~~ 422 (788)
T PRK15387 357 -LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLT-SLPVLP--SELKELMVSGNRLTS-LPML---PS 422 (788)
T ss_pred -CCCC---CcccceehhhccccccCccc---ccccceEEecCCccc-CCCCcc--cCCCEEEccCCcCCC-CCcc---hh
Confidence 5543 35788899999999975542 357999999999998 466532 479999999999995 5653 34
Q ss_pred cCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCC
Q 002178 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (956)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l 365 (956)
+|+.|+|++|+|+ .+|..+..+.. |..|+|++|.|++.
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~~L~~-----L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLIHLSS-----ETTVNLEGNPLSER 460 (788)
T ss_pred hhhhhhhccCccc-ccChHHhhccC-----CCeEECCCCCCCch
Confidence 6888999999998 78988876554 55899999999863
No 426
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.81 E-value=4.2e-19 Score=227.58 Aligned_cols=278 Identities=19% Similarity=0.247 Sum_probs=146.8
Q ss_pred eeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeeccc
Q 002178 84 LRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ 163 (956)
Q Consensus 84 ~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 163 (956)
++.|++.++.+. .+|..+ .+.+|++|+|++|++. .++..+..+++|++|+|++|...+.+|. ++.+++|++|+|++
T Consensus 591 Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~ 666 (1153)
T PLN03210 591 LRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSD 666 (1153)
T ss_pred cEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecC
Confidence 344444443332 233333 3456666666666665 4555566666666666666544445553 55666666666666
Q ss_pred ccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCC
Q 002178 164 NYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTI 243 (956)
Q Consensus 164 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 243 (956)
|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|+|++|...+.+|.. ..+|++|+|++|.+. .+
T Consensus 667 c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~--~l 740 (1153)
T PLN03210 667 CSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE--EF 740 (1153)
T ss_pred CCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc--cc
Confidence 55445566666666666666666654333555443 5566666666666544444432 235566666666654 23
Q ss_pred cccccCCCCCcEEeccCCCCccC-------CCC-CCCCCCccEEEccCCcCCcCCCCCCCcc-ccCEEEccCCcCCCCCc
Q 002178 244 PASYSNMSKLLKLSLRNCSLQGP-------MPD-LSRIPNLGYLDLSSNQLNGSIPPGRLSL-NITTIKLSNNKLTGTIP 314 (956)
Q Consensus 244 p~~~~~l~~L~~L~Ls~N~l~~~-------~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-~L~~L~Ls~N~l~~~~p 314 (956)
|..+ .+++|+.|++.++..... .+. ....++|+.|+|++|...+.+|..+... +|+.|+|++|..-+.+|
T Consensus 741 P~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP 819 (1153)
T PLN03210 741 PSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLP 819 (1153)
T ss_pred cccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeC
Confidence 4332 234444444433221110 000 1123456666666666555566554332 56666666654333455
Q ss_pred hhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC-CCCCCcEEEecC
Q 002178 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF-NIPPNVTVRLRG 381 (956)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~-~~~~l~~l~l~~ 381 (956)
..+ ++++|+.|+|++|.....+|.. ..+|+.|+|++|.++.+|..+ .++.+..|++.+
T Consensus 820 ~~~-~L~sL~~L~Ls~c~~L~~~p~~--------~~nL~~L~Ls~n~i~~iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 820 TGI-NLESLESLDLSGCSRLRTFPDI--------STNISDLNLSRTGIEEVPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CCC-CccccCEEECCCCCcccccccc--------ccccCEeECCCCCCccChHHHhcCCCCCEEECCC
Confidence 444 5666666666665544344432 123456666666666666554 356666666665
No 427
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=5.9e-21 Score=222.09 Aligned_cols=253 Identities=20% Similarity=0.237 Sum_probs=178.9
Q ss_pred CCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCC-hhhHHHHH---HHHHHHHhcCCCceeeeecccccCCcEEEEEe
Q 002178 625 NFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGS-LQGEKEFL---TEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYE 700 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~---~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e 700 (956)
+|...+.||.+.|=+|.+|++++|. |+||++-... ......|. +|++ ...++|||.+++...-......|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666788999999999999998887 8899876543 22233443 3444 556689999999888888888899999
Q ss_pred cCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 701 FMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 701 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
|+. -+|+|.+..+. -+...+.++|+.|++.||.-+|+.+ |+|||||.+|||+++-.-+.|+||..-+..--++.
T Consensus 102 yvk-hnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVK-HNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHh-hhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 995 59999996543 4888899999999999999999999 99999999999999999999999987654333322
Q ss_pred CCccccceecccccCCCcccccccccC----------C-CCCcccchhHHHHHHHHHh-CCCCCCCCchhHHHHHH-Hhh
Q 002178 781 EGIVPAHVSTVVKGTPGYLDPEYFLTH----------K-LTDKSDVYSLGVVFLELLT-GMQPISHGKNIVREVNI-AYQ 847 (956)
Q Consensus 781 ~~~~~~~~~~~~~gt~~y~aPE~~~~~----------~-~~~~sDVwS~G~ll~ellt-g~~pf~~~~~~~~~~~~-~~~ 847 (956)
.................|+|||.+... . .+++-||||+||++.|+++ |++||.-. .+..+... .+.
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-QL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-QLLAYRSGNADD 254 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-HHHhHhccCccC
Confidence 211112222333445689999988542 1 5678999999999999999 67777421 11110000 000
Q ss_pred cccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 002178 848 SSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELE 896 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~ 896 (956)
.+...+ .++ ...+++++..|++.||.+|-++++.++.-.
T Consensus 255 ~e~~Le-------~Ie---d~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 255 PEQLLE-------KIE---DVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred HHHHHH-------hCc---CccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 000000 001 125677888888888888888888776533
No 428
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=1.1e-19 Score=184.90 Aligned_cols=140 Identities=19% Similarity=0.152 Sum_probs=108.7
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh--h------------------------HHHHHHHHHHHHhcCCCce
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--G------------------------EKEFLTEIQFLSRLHHRNL 682 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~nI 682 (956)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4679999999999999878999999998753211 0 1122459999999988776
Q ss_pred eeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCEeccCCCcccEEEcCC
Q 002178 683 VSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 683 v~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
.....+.. ...++||||++++++...... ...++......++.|++.+|.|+ |+.+ |+||||||+||+++ +
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-C
Confidence 44333222 234899999988877654322 23578889999999999999999 6888 99999999999998 4
Q ss_pred CcEEEEeeccccccC
Q 002178 762 FTAKVADFGLSRLAP 776 (956)
Q Consensus 762 ~~~kl~DfGla~~~~ 776 (956)
+.++|+|||+|....
T Consensus 154 ~~v~LiDFG~a~~~~ 168 (190)
T cd05147 154 GKLYIIDVSQSVEHD 168 (190)
T ss_pred CcEEEEEccccccCC
Confidence 789999999997543
No 429
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=6e-20 Score=188.44 Aligned_cols=172 Identities=15% Similarity=0.115 Sum_probs=133.9
Q ss_pred HHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHH---H------HHHHHHHHHhcCCCceeeeeccccc
Q 002178 621 LATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEK---E------FLTEIQFLSRLHHRNLVSLVGYCDE 691 (956)
Q Consensus 621 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---~------~~~E~~~l~~l~h~nIv~l~~~~~~ 691 (956)
...++|+..+.+|.|+||.||.+.. ++..+|+|.+.......++ . +.+|++.+.++.|++|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3478999999999999999999766 5778999999754333222 2 6789999999999999999888643
Q ss_pred C--------CcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc
Q 002178 692 E--------GEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT 763 (956)
Q Consensus 692 ~--------~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~ 763 (956)
. +..++||||++|.+|.++.. ++. ....+++.++..+|+.+ ++|||+||+||+++.++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-
Confidence 2 36899999999999988742 222 24568999999999999 99999999999999988
Q ss_pred EEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHH
Q 002178 764 AKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELL 826 (956)
Q Consensus 764 ~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ell 826 (956)
++|+|||..+....... ...+.....+..++|+|+||+.+.-..
T Consensus 173 i~liDfg~~~~~~e~~a-------------------~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKA-------------------KDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhh-------------------HHHHHHHhHhcccccccceeEeehHHH
Confidence 99999998865432110 011344555677999999999876554
No 430
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.79 E-value=1.9e-18 Score=221.70 Aligned_cols=270 Identities=20% Similarity=0.230 Sum_probs=163.8
Q ss_pred CCcCcCCCC-CCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccc
Q 002178 98 LSPEIGRLS-YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFAN 176 (956)
Q Consensus 98 ~~~~l~~l~-~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 176 (956)
+|..+..++ +|+.|++.+|.+. .+|..| ...+|++|+|++|++. .++..+..+++|++|+|++|...+.+|. +..
T Consensus 580 lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~ 655 (1153)
T PLN03210 580 LPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIPD-LSM 655 (1153)
T ss_pred cCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCCc-ccc
Confidence 444454442 3666666665554 455544 3456666666666655 4555556666666666665543334442 555
Q ss_pred cccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEE
Q 002178 177 LNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKL 256 (956)
Q Consensus 177 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L 256 (956)
+++|+.|+|++|.....+|..+.++++|+.|++++|.....+|..+ ++++|+.|+|++|...+ .+|.. .++|+.|
T Consensus 656 l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~-~~p~~---~~nL~~L 730 (1153)
T PLN03210 656 ATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLK-SFPDI---STNISWL 730 (1153)
T ss_pred CCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCcc-ccccc---cCCcCee
Confidence 6666666666655444566666666666666666654333444443 45566666666654332 23322 3455666
Q ss_pred eccCCCCccCCCCCCCCCCccEEEccCCcCC---c----CCCCC-CCccccCEEEccCCcCCCCCchhcCCCCcCCeEec
Q 002178 257 SLRNCSLQGPMPDLSRIPNLGYLDLSSNQLN---G----SIPPG-RLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFI 328 (956)
Q Consensus 257 ~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~---~----~~p~~-~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 328 (956)
+|++|.++..+..+ .+++|+.|+++++... + ..+.. ....+|+.|+|++|...+.+|..++++++|+.|+|
T Consensus 731 ~L~~n~i~~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~L 809 (1153)
T PLN03210 731 DLDETAIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEI 809 (1153)
T ss_pred ecCCCccccccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEEC
Confidence 66666665444332 4556666666553221 0 00111 11237999999999888899999999999999999
Q ss_pred ccccCCCcCChhhhhhccCCCCcceEEEccCC-CCCCCCCCCCCCCCcEEEecCCccc
Q 002178 329 ANNSLSGSIPSSIWQSRTLNATETFILDFQNN-NLTNISGSFNIPPNVTVRLRGNPFC 385 (956)
Q Consensus 329 ~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N-~L~~l~~~~~~~~l~~l~l~~Np~~ 385 (956)
++|+..+.+|..+ ..++|+.|+|++| ++..+|.. ..++..|+|++|.+.
T Consensus 810 s~C~~L~~LP~~~------~L~sL~~L~Ls~c~~L~~~p~~--~~nL~~L~Ls~n~i~ 859 (1153)
T PLN03210 810 ENCINLETLPTGI------NLESLESLDLSGCSRLRTFPDI--STNISDLNLSRTGIE 859 (1153)
T ss_pred CCCCCcCeeCCCC------CccccCEEECCCCCcccccccc--ccccCEeECCCCCCc
Confidence 9987666788764 3567889999996 45666543 356788999998754
No 431
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.3e-18 Score=177.70 Aligned_cols=139 Identities=20% Similarity=0.155 Sum_probs=110.3
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh---------------------h-----HHHHHHHHHHHHhcCCCce
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ---------------------G-----EKEFLTEIQFLSRLHHRNL 682 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~-----~~~~~~E~~~l~~l~h~nI 682 (956)
...||+|++|.||+|...+|+.||||+++..... . ...+..|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754211 0 1224578999999999987
Q ss_pred eeeecccccCCcEEEEEecCCCCCHHHH-HhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcC
Q 002178 683 VSLVGYCDEEGEQMLVYEFMSNGTLRDQ-LSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 760 (956)
Q Consensus 683 v~l~~~~~~~~~~~LV~e~~~~gsL~~~-l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~ 760 (956)
.....+... ..++||||++++++... +.. ..++......++.|++.++.++|+ .+ |+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-
Confidence 544433322 34899999988865443 322 346778889999999999999999 88 99999999999999
Q ss_pred CCcEEEEeeccccccC
Q 002178 761 KFTAKVADFGLSRLAP 776 (956)
Q Consensus 761 ~~~~kl~DfGla~~~~ 776 (956)
++.++|+|||+|+...
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 7899999999998654
No 432
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.1e-18 Score=174.88 Aligned_cols=191 Identities=14% Similarity=0.074 Sum_probs=139.9
Q ss_pred CCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh----HHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEec
Q 002178 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 627 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
.+...|++|+||+||.+.. .+..++.+.+.....-. ...+.+|+++|++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3467899999999997765 67888877776543311 235789999999995 5889999886 457999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCC-CcccEEEcCCCcEEEEeeccccccCCCCC
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI-KASNILLDHKFTAKVADFGLSRLAPVPDI 780 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl-k~~NILl~~~~~~kl~DfGla~~~~~~~~ 780 (956)
++|.+|.+.... ....+..|++++|.++|+.| |+|||| ||+|||++.++.++|+|||+|........
T Consensus 80 I~G~~L~~~~~~---------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR---------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh---------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999999765421 11346788999999999999 999999 79999999999999999999985442210
Q ss_pred C-Cccc----cc-eecccccCCCcccccccccC-CCC-CcccchhHHHHHHHHHhCCCCCCC
Q 002178 781 E-GIVP----AH-VSTVVKGTPGYLDPEYFLTH-KLT-DKSDVYSLGVVFLELLTGMQPISH 834 (956)
Q Consensus 781 ~-~~~~----~~-~~~~~~gt~~y~aPE~~~~~-~~~-~~sDVwS~G~ll~elltg~~pf~~ 834 (956)
- .... .+ .......++.|++|+...-- ..+ ...+.++-|+.+|.++|++.+...
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 0000 00 01123367788888865432 222 567899999999999999887643
No 433
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=7.6e-21 Score=177.22 Aligned_cols=165 Identities=30% Similarity=0.494 Sum_probs=103.6
Q ss_pred cccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccc
Q 002178 126 IGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLV 205 (956)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 205 (956)
+.++...+.|-||+|+++ .+|..++.|.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. .+|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445666777777777777 66667777777777777777776 56666666666666666666665 5555566666666
Q ss_pred eecccccccC-CCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCC
Q 002178 206 HMLLDNNNLT-GYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSN 284 (956)
Q Consensus 206 ~L~L~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N 284 (956)
.|||..|++. ..+|..|..+..|+-|+|++|.| .-.+++++.+++|+.|.+..|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndf-------------------------e~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDF-------------------------EILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCc-------------------------ccCChhhhhhcceeEEeeccC
Confidence 6665555554 33445555555555555555555 444444444445555544444
Q ss_pred cCCcCCCCCCCccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhhhh
Q 002178 285 QLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQ 343 (956)
Q Consensus 285 ~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 343 (956)
.+- ..|..++.|..|++|.+.+|+++ .+|..++.
T Consensus 161 dll------------------------~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 161 DLL------------------------SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred chh------------------------hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 443 55677777778888888888877 66666554
No 434
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=1.5e-18 Score=194.63 Aligned_cols=217 Identities=26% Similarity=0.416 Sum_probs=161.5
Q ss_pred HHhcCCCceeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCc
Q 002178 674 LSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 753 (956)
Q Consensus 674 l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 753 (956)
|+.+.|.|+.+|+|.+.++...+.|.+||..|+|.|.+.. ....+++.....++++|+.||+|+|... -..|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeecc
Confidence 3567899999999999999999999999999999999976 3456899999999999999999999865 238999999
Q ss_pred ccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC-------CCCCcccchhHHHHHHHHH
Q 002178 754 SNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH-------KLTDKSDVYSLGVVFLELL 826 (956)
Q Consensus 754 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~sDVwS~G~ll~ell 826 (956)
+|+++|....+|++|||+......... ........-..-|.|||.+... ..+.+.||||||++++|++
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~-----~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~ 152 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAE-----PEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEIL 152 (484)
T ss_pred ccceeeeeEEEEechhhhccccccccc-----ccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHH
Confidence 999999999999999999877642100 0111122234579999999763 1467799999999999999
Q ss_pred hCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC--hHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 827 TGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP--SECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 827 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
+.+.||.......+.......... .-....++... .+..+.+..++..||..+|.+||++.++-..++.+..
T Consensus 153 ~r~~~~~~~~~~~~~~eii~~~~~--~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 153 FRSGPFDLRNLVEDPDEIILRVKK--GGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred hccCccccccccCChHHHHHHHHh--cCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 999999753322211111111000 00001112111 1455579999999999999999999999888776644
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=3.2e-20 Score=173.07 Aligned_cols=166 Identities=26% Similarity=0.524 Sum_probs=144.6
Q ss_pred CcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccC
Q 002178 101 EIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKT 180 (956)
Q Consensus 101 ~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 180 (956)
.+.++++++.|.||+|+++ .+|..+..+++|+.|++++|++. .+|.+++.|++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 4556778888899999998 67778999999999999999998 88889999999999999999988 889999999999
Q ss_pred CeeecccCcCC-CCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEecc
Q 002178 181 RHFHMNNNSIS-GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLR 259 (956)
Q Consensus 181 ~~L~L~~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls 259 (956)
+.|||++|++. ..+|..|..+..|+-|+|++|.+. .+|..++++++|+.|.+..|.+- .+|..++.++.|++|.+.
T Consensus 105 evldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll--~lpkeig~lt~lrelhiq 181 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL--SLPKEIGDLTRLRELHIQ 181 (264)
T ss_pred hhhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh--hCcHHHHHHHHHHHHhcc
Confidence 99999999886 357888889999999999999998 88889999999999999999985 688999999999999999
Q ss_pred CCCCccCCCCCCC
Q 002178 260 NCSLQGPMPDLSR 272 (956)
Q Consensus 260 ~N~l~~~~~~l~~ 272 (956)
+|+++-.+|+++.
T Consensus 182 gnrl~vlppel~~ 194 (264)
T KOG0617|consen 182 GNRLTVLPPELAN 194 (264)
T ss_pred cceeeecChhhhh
Confidence 9998887776543
No 436
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.75 E-value=1.5e-20 Score=209.39 Aligned_cols=251 Identities=22% Similarity=0.269 Sum_probs=153.8
Q ss_pred EEEeCCCCccc-cCCcCcCCCCCCCEEEccCCCCcc----cCCcccccCcccchhhccCcCCCC------CCCCccCCCc
Q 002178 86 ELQLLNLNLSG-NLSPEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNELTG------SLPEELGYLP 154 (956)
Q Consensus 86 ~L~L~~~~l~~-~~~~~l~~l~~L~~L~Ls~N~l~~----~ip~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~ 154 (956)
.|+|.++++++ .....+..+..|+.|+|+++.++. .++..+...++|++|++++|.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 36677777773 344556677778888888888854 355566677778888888888762 2234566677
Q ss_pred ccceeecccccccCCCCcccccccc---CCeeecccCcCCC----CCccccCCC-cccceecccccccCCC----CCccc
Q 002178 155 KLDRIQIDQNYISGSLPKSFANLNK---TRHFHMNNNSISG----QIPPELSRL-PSLVHMLLDNNNLTGY----LPPEL 222 (956)
Q Consensus 155 ~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~L~~N~l~~~----~p~~l 222 (956)
+|+.|+|++|.+.+..+..+..+.+ |++|++++|+++. .+...+..+ ++|+.|+|++|.+++. +...+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 8888888888887666666655555 8888888887763 223344555 7778888888877742 23344
Q ss_pred CCcchhhhhcccCCcCCCCC---CcccccCCCCCcEEeccCCCCccCCC-----CCCCCCCccEEEccCCcCCcCCCCCC
Q 002178 223 SELPKLLILQLDNNNFEGTT---IPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIPPGR 294 (956)
Q Consensus 223 ~~l~~L~~L~Ls~N~l~~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~~p~~~ 294 (956)
..+++|++|+|++|.+++.. ++..+..+++|+.|+|++|.+++... .+..+++|++|++++|.+++......
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 55566777777777776421 22234445577777777777654221 24556667777777776653111110
Q ss_pred ------CccccCEEEccCCcCCC----CCchhcCCCCcCCeEecccccCCCc
Q 002178 295 ------LSLNITTIKLSNNKLTG----TIPSNFSGLPRLQRLFIANNSLSGS 336 (956)
Q Consensus 295 ------~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (956)
...+|++|++++|.++. .+...+..+++|++|++++|++...
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 01255555555555541 2233344445555555555555533
No 437
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.75 E-value=5.7e-20 Score=211.15 Aligned_cols=269 Identities=24% Similarity=0.267 Sum_probs=215.3
Q ss_pred ceeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeec
Q 002178 82 LHLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 82 ~~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
..++.|+..+|-+..... -..-.+|+++|+++|+++ .+|..++.+.+|+.|+..+|+|+ .+|..+..+++|+.|++
T Consensus 219 ~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 355666666666662211 123357999999999999 67899999999999999999996 89999999999999999
Q ss_pred ccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcc-cceecccccccCCCCCcccCCcchhhhhcccCCcCCC
Q 002178 162 DQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPS-LVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEG 240 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 240 (956)
.+|.++ .+|.....+++|+.|+|..|+|....+..+..+.. |..|+.+.|++.....-.=..++.|+.|.+.+|.++.
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 999998 88888899999999999999998443334444443 8889999999885442223346789999999999987
Q ss_pred CCCcccccCCCCCcEEeccCCCCccCCCC-CCCCCCccEEEccCCcCCcCCCCCCC-ccccCEEEccCCcCCCCCchhcC
Q 002178 241 TTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSRIPNLGYLDLSSNQLNGSIPPGRL-SLNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 241 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~-~~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
..-..+.++++|+.|+|++|+|...+.. +.+++.|+.|+||+|+|+ .+|.... ...|++|...+|+|. ..| .+.
T Consensus 374 -~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~ 449 (1081)
T KOG0618|consen 374 -SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA 449 (1081)
T ss_pred -cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh
Confidence 4556788999999999999999987765 899999999999999999 7776544 348999999999999 667 899
Q ss_pred CCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCC
Q 002178 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTN 364 (956)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~ 364 (956)
.++.|+.+|++.|+|+...-.. .+..++|++|||++|.-..
T Consensus 450 ~l~qL~~lDlS~N~L~~~~l~~-----~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 450 QLPQLKVLDLSCNNLSEVTLPE-----ALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred hcCcceEEecccchhhhhhhhh-----hCCCcccceeeccCCcccc
Confidence 9999999999999998532221 1234778899999997433
No 438
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=2e-17 Score=169.64 Aligned_cols=136 Identities=17% Similarity=0.209 Sum_probs=105.8
Q ss_pred CCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-----CCCceeeeecccccCC---cEE-E
Q 002178 627 NSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-----HHRNLVSLVGYCDEEG---EQM-L 697 (956)
Q Consensus 627 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-----~h~nIv~l~~~~~~~~---~~~-L 697 (956)
...+.||+|+||.||. .-.++.. +||++........+.+.+|+++++.+ .||||++++|++.++. ..+ +
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 4467899999999996 2224444 69988765444567899999999999 5799999999997763 333 7
Q ss_pred EEec--CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHH-HHhhhcCCCCEeccCCCcccEEEcC----CCcEEEEeec
Q 002178 698 VYEF--MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGI-LYLHTEADPPVFHRDIKASNILLDH----KFTAKVADFG 770 (956)
Q Consensus 698 V~e~--~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivH~Dlk~~NILl~~----~~~~kl~DfG 770 (956)
|+|| +++|+|.+++.+. .+++. ..++.+++.++ +|||+++ |+||||||+|||++. ++.++|+||+
T Consensus 83 I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 5579999999653 24444 35577888777 9999999 999999999999974 3489999955
Q ss_pred cc
Q 002178 771 LS 772 (956)
Q Consensus 771 la 772 (956)
.+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=1.5e-17 Score=198.89 Aligned_cols=253 Identities=24% Similarity=0.298 Sum_probs=186.8
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcC---CCceeeeecccccCCc
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLH---HRNLVSLVGYCDEEGE 694 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~nIv~l~~~~~~~~~ 694 (956)
+..+..+.|.+.+.||+|+||+||+|...+|+.||+|+-+..+.. +|.-=.+++.||+ -+-|..+...+.-.+.
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 556667889999999999999999999888999999987764433 1211223444444 2344555556666778
Q ss_pred EEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEc-------CCCcEEEE
Q 002178 695 QMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLD-------HKFTAKVA 767 (956)
Q Consensus 695 ~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~-------~~~~~kl~ 767 (956)
-+||+||.+-|+|.+++. ....++|..++.++.|+++.+++||..+ |||+||||+|.++. ...-++|+
T Consensus 769 S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred ceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEEE
Confidence 899999999999999996 4556999999999999999999999999 99999999999994 24469999
Q ss_pred eeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhh
Q 002178 768 DFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQ 847 (956)
Q Consensus 768 DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~ 847 (956)
|||.+-.+..-. ........++|-.+-.+|...+..|++..|-|.++.+++-|+.|+..= ..
T Consensus 844 DfG~siDm~lfp-----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-------------~~ 905 (974)
T KOG1166|consen 844 DFGRSIDMKLFP-----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-------------VK 905 (974)
T ss_pred ecccceeeeEcC-----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-------------hc
Confidence 999986543221 123445677899999999999999999999999999999999885421 01
Q ss_pred cccchhhccCCCCCC-ChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHh
Q 002178 848 SSMMFSVIDGNMGSY-PSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWN 900 (956)
Q Consensus 848 ~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~ 900 (956)
.+..+.+ ...+..+ ..+.+.++..++.. .+-..-|...++...++.+..
T Consensus 906 ~g~~~~~-~~~~~Ry~~~~~W~~~F~~lLN---~~~~~~p~l~~lr~~~~~~~~ 955 (974)
T KOG1166|consen 906 NGSSWMV-KTNFPRYWKRDMWNKFFDLLLN---PDCDTLPNLQELRTELEEVLA 955 (974)
T ss_pred CCcceec-cccchhhhhHHHHHHHHHHHhC---cCcccchhHHHHHHHHHHHHH
Confidence 1111111 1112222 34556666665544 666666788888877776654
No 440
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.73 E-value=7.2e-19 Score=196.44 Aligned_cols=225 Identities=26% Similarity=0.290 Sum_probs=178.0
Q ss_pred eeeeeCCeEEEEEE----eCCCcEEEEEEecCCChhh--HHHHHHHHHHHHhcC-CCceeeeecccccCCcEEEEEecCC
Q 002178 631 QIGQGGYGKVYKGI----LPDGTVVAVKRAQEGSLQG--EKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQMLVYEFMS 703 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~--~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~LV~e~~~ 703 (956)
.+|+|.||.|+.+. .+.|..+|.|+.+...... ......|-.++...+ ||.++++.-.++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999998754 2347788988877543222 123455777888887 9999999999999999999999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCc
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGI 783 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 783 (956)
+|.|...+... ..+.+.....+...++-|++++|+.+ |+|||+|++||+++.+|.+|+.|||+++..-..+
T Consensus 81 gg~lft~l~~~--~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 81 GGDLFTRLSKE--VMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred cchhhhccccC--CchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 99998888543 34677777778888999999999999 9999999999999999999999999998653221
Q ss_pred cccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCC
Q 002178 784 VPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYP 863 (956)
Q Consensus 784 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 863 (956)
..+||..|||||++. ....+.|.||||++++||+||..||.. +.. . .|-..-..+|
T Consensus 152 -------~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--~~~---~----------~Il~~~~~~p 207 (612)
T KOG0603|consen 152 -------IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--DTM---K----------RILKAELEMP 207 (612)
T ss_pred -------hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--HHH---H----------HHhhhccCCc
Confidence 117899999999998 567889999999999999999999975 111 1 1112223567
Q ss_pred hHHHHHHHHHHHHhcccCCCCCCCH
Q 002178 864 SECVEKFIKLALKCCQDETDARPSM 888 (956)
Q Consensus 864 ~~~~~~l~~l~~~c~~~~p~~RPs~ 888 (956)
.+.+.....++......+|..|--.
T Consensus 208 ~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 208 RELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred hhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 8888888888888888888888543
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.73 E-value=4.8e-17 Score=172.08 Aligned_cols=229 Identities=22% Similarity=0.266 Sum_probs=146.2
Q ss_pred CCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCCh---hhHHHHHHHHHHHHhcC----------CCceeeeeccc----
Q 002178 628 SSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSL---QGEKEFLTEIQFLSRLH----------HRNLVSLVGYC---- 689 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~----------h~nIv~l~~~~---- 689 (956)
..+.||.|+++.||.+++. +++.+|||++..... ...+++.+|.-....+. |-.++..++..
T Consensus 16 ~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~ 95 (288)
T PF14531_consen 16 RGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPG 95 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETT
T ss_pred EccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcC
Confidence 4578999999999999976 589999998764332 22356666655444432 21222111111
Q ss_pred -----ccC---C-----cEEEEEecCCCCCHHHHHhh---c--CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCC
Q 002178 690 -----DEE---G-----EQMLVYEFMSNGTLRDQLSA---K--SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDI 751 (956)
Q Consensus 690 -----~~~---~-----~~~LV~e~~~~gsL~~~l~~---~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dl 751 (956)
... . ..+++|+-+ -+||.+++.. . ....+....++.+..|+++.+++||+.| ++|+||
T Consensus 96 ~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVHgdi 171 (288)
T PF14531_consen 96 KPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVHGDI 171 (288)
T ss_dssp S-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEEST-
T ss_pred CCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEeccc
Confidence 111 1 347788888 5799887642 2 2224666777888899999999999999 999999
Q ss_pred CcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccC--------CCCCcccchhHHHHHH
Q 002178 752 KASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTH--------KLTDKSDVYSLGVVFL 823 (956)
Q Consensus 752 k~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~~~sDVwS~G~ll~ 823 (956)
||+|++++.+|.++|+||+.....+. . ......+..|.+||..... .++.+.|.|++|+++|
T Consensus 172 ~~~nfll~~~G~v~Lg~F~~~~r~g~---------~-~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly 241 (288)
T PF14531_consen 172 KPENFLLDQDGGVFLGDFSSLVRAGT---------R-YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLY 241 (288)
T ss_dssp SGGGEEE-TTS-EEE--GGGEEETTE---------E-EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHH
T ss_pred ceeeEEEcCCCCEEEcChHHHeecCc---------e-eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHH
Confidence 99999999999999999998765431 1 1113455789999987542 4788999999999999
Q ss_pred HHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCC
Q 002178 824 ELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDAR 885 (956)
Q Consensus 824 elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~R 885 (956)
.|.+|+.||........ .+..+.... +.++.+..++...++.+|.+|
T Consensus 242 ~lWC~~lPf~~~~~~~~--------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 242 SLWCGRLPFGLSSPEAD--------------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHSS-STCCCGGGST--------------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHccCCCCCCCcccc--------------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999975432110 000122233 777888888888888888776
No 442
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.70 E-value=1.7e-19 Score=200.78 Aligned_cols=273 Identities=20% Similarity=0.250 Sum_probs=202.6
Q ss_pred EEEccCCCCc-ccCCcccccCcccchhhccCcCCCCC----CCCccCCCcccceeecccccccC------CCCccccccc
Q 002178 110 ILDFMWNKIS-GSIPKEIGNIKSLELLLLNGNELTGS----LPEELGYLPKLDRIQIDQNYISG------SLPKSFANLN 178 (956)
Q Consensus 110 ~L~Ls~N~l~-~~ip~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~------~~p~~~~~l~ 178 (956)
.|+|..+.++ ......+..+.+|++|+|++|.++.. ++..+...++|++|+++++.+.+ .++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 5788889887 45566677888999999999998643 55667778889999999998873 2345677889
Q ss_pred cCCeeecccCcCCCCCccccCCCcc---cceecccccccCC----CCCcccCCc-chhhhhcccCCcCCCC---CCcccc
Q 002178 179 KTRHFHMNNNSISGQIPPELSRLPS---LVHMLLDNNNLTG----YLPPELSEL-PKLLILQLDNNNFEGT---TIPASY 247 (956)
Q Consensus 179 ~L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~p~~l~~l-~~L~~L~Ls~N~l~~~---~~p~~~ 247 (956)
+|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|+|++|.+++. .+...+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999998766766666655 9999999999983 333455666 8999999999999842 234456
Q ss_pred cCCCCCcEEeccCCCCccC-----CCCCCCCCCccEEEccCCcCCcCCCCC-----CCccccCEEEccCCcCCCCCchhc
Q 002178 248 SNMSKLLKLSLRNCSLQGP-----MPDLSRIPNLGYLDLSSNQLNGSIPPG-----RLSLNITTIKLSNNKLTGTIPSNF 317 (956)
Q Consensus 248 ~~l~~L~~L~Ls~N~l~~~-----~~~l~~l~~L~~L~Ls~N~l~~~~p~~-----~~~~~L~~L~Ls~N~l~~~~p~~~ 317 (956)
..+++|++|+|++|.+++. ...+..+++|+.|+|++|.+++..... ....+|++|++++|.+++.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 7788999999999999852 123556689999999999987433221 112479999999999986444333
Q ss_pred C-----CCCcCCeEecccccCCCcCChhhh-hhccCCCCcceEEEccCCCCCCCCCC-----C-CC-CCCcEEEecCCcc
Q 002178 318 S-----GLPRLQRLFIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLTNISGS-----F-NI-PPNVTVRLRGNPF 384 (956)
Q Consensus 318 ~-----~l~~L~~L~L~~N~l~~~~p~~~~-~l~~l~~~~L~~L~L~~N~L~~l~~~-----~-~~-~~l~~l~l~~Np~ 384 (956)
. ..+.|+.|++++|.++......+. .+.. .+.|+.+++++|.++.-+.. . .. +.+..+++.+|||
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~--~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAE--KESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhc--CCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 3 247999999999999743222222 2222 25788999999999865322 1 23 6788899999987
No 443
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.70 E-value=1.7e-19 Score=189.07 Aligned_cols=280 Identities=18% Similarity=0.193 Sum_probs=201.0
Q ss_pred EEeCCCCccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeeccc-cc
Q 002178 87 LQLLNLNLSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQ-NY 165 (956)
Q Consensus 87 L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~ 165 (956)
++-++-+|. .+|..+. ..-+.|+|..|+|+.+-|.+|+.+++|+.||||+|+|+.+-|++|.+|.+|..|-+-+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 455555555 2333332 2457888999999977778899999999999999999988999999999988877766 89
Q ss_pred ccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcc
Q 002178 166 ISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPA 245 (956)
Q Consensus 166 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~ 245 (956)
|+......|.+|..|+.|.+.-|++.-...+.|..+++|..|.|-+|.+...-...|..+..++.+.+..|.+..
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic----- 202 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC----- 202 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----
Confidence 997777789999999999999999987778889999999999999999985444478888999999999888632
Q ss_pred cccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCccccCE----EEccCCcCCCCCchhcCCCC
Q 002178 246 SYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITT----IKLSNNKLTGTIPSNFSGLP 321 (956)
Q Consensus 246 ~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~----L~Ls~N~l~~~~p~~~~~l~ 321 (956)
..+++.|.. ++.-|.+ .++...-..-..|.++++. .+++..+.-.++. +....+...-.....|..|+
T Consensus 203 -dCnL~wla~-~~a~~~i-----etsgarc~~p~rl~~~Ri~-q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~ 274 (498)
T KOG4237|consen 203 -DCNLPWLAD-DLAMNPI-----ETSGARCVSPYRLYYKRIN-QEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLP 274 (498)
T ss_pred -ccccchhhh-HHhhchh-----hcccceecchHHHHHHHhc-ccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcc
Confidence 122332221 1111111 1223333333444555554 3333322222222 22222233323346799999
Q ss_pred cCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC--CCCCCcEEEecCCccccc
Q 002178 322 RLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF--NIPPNVTVRLRGNPFCLN 387 (956)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~--~~~~l~~l~l~~Np~~c~ 387 (956)
+|+.|+|++|+|++.-+.+|..+.. ++.|.|..|+|..+.... .+..+.+|+|.||...|-
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~a~-----l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~ 337 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGAAE-----LQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTV 337 (498)
T ss_pred cceEeccCCCccchhhhhhhcchhh-----hhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEE
Confidence 9999999999999988889877555 458999999999987764 588999999999999884
No 444
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.69 E-value=1.4e-17 Score=194.51 Aligned_cols=172 Identities=28% Similarity=0.438 Sum_probs=121.8
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..+|+.++.|-.|+||.||..+++ ..+.+|.|+ ++... +.+- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc--cccccCCccee------------------
Confidence 457888999999999999999876 367788843 32211 1110 22222233222
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCC---
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVP--- 778 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~--- 778 (956)
|+=.+.++.-+. ++... +.+++|+|+.+ |+|||+||+|.+++.-|.+|++|||+++..-..
T Consensus 136 ---gDc~tllk~~g~--lPvdm--------vla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at 199 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP--LPVDM--------VLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT 199 (1205)
T ss_pred ---chhhhhcccCCC--Ccchh--------hHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccc
Confidence 444555543333 22222 67899999999 999999999999999999999999998653211
Q ss_pred -----CCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCc
Q 002178 779 -----DIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGK 836 (956)
Q Consensus 779 -----~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~ 836 (956)
.............++||+.|+|||++..+.|...+|+|++|+++||.+-|+.||+...
T Consensus 200 nl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt 262 (1205)
T KOG0606|consen 200 NLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT 262 (1205)
T ss_pred hhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC
Confidence 0111011112234589999999999999999999999999999999999999998653
No 445
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=2.1e-16 Score=165.84 Aligned_cols=202 Identities=21% Similarity=0.253 Sum_probs=144.6
Q ss_pred CCCceeeeeccccc---------------------------CCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHH
Q 002178 678 HHRNLVSLVGYCDE---------------------------EGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALG 730 (956)
Q Consensus 678 ~h~nIv~l~~~~~~---------------------------~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ 730 (956)
+|||||++.++|.+ ....|+||..+ ..+|+.++..+. .+.....-|..|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~---~s~r~~~~~laQ 349 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH---RSYRTGRVILAQ 349 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC---CchHHHHHHHHH
Confidence 49999999887633 23579999988 469999996543 344556678889
Q ss_pred HHHHHHHhhhcCCCCEeccCCCcccEEE--cCCC--cEEEEeeccccccCCCCCCCccccceecccccCCCccccccccc
Q 002178 731 SSRGILYLHTEADPPVFHRDIKASNILL--DHKF--TAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLT 806 (956)
Q Consensus 731 ia~gL~yLH~~~~~~ivH~Dlk~~NILl--~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 806 (956)
+++|+.|||+++ |.|||+|++|||+ |+|+ ...|+|||.+--.+.....-. .........|.-..||||+...
T Consensus 350 lLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlp-y~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 350 LLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLP-YESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccc-cccccccCCCcceecchhhhhc
Confidence 999999999999 9999999999999 3443 578899998743221100000 0111233457778999999865
Q ss_pred CC------CCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhccc
Q 002178 807 HK------LTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQD 880 (956)
Q Consensus 807 ~~------~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~ 880 (956)
.+ --.|.|.|+.|.+.||+++...||.......-.... +++ ..++..|+.++..+.+++...++.
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~-Yqe--------~qLPalp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT-YQE--------SQLPALPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh-hhh--------hhCCCCcccCChHHHHHHHHHhcC
Confidence 32 124799999999999999999999763322111111 222 235677888999999999999999
Q ss_pred CCCCCCCHHHHHHHHH
Q 002178 881 ETDARPSMSEVMRELE 896 (956)
Q Consensus 881 ~p~~RPs~~~v~~~L~ 896 (956)
+|.+|++..-....++
T Consensus 497 ~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 497 DPSKRVSPNIAANVLN 512 (598)
T ss_pred CccccCCccHHHhHHH
Confidence 9999998765544443
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=2.5e-16 Score=164.21 Aligned_cols=134 Identities=20% Similarity=0.330 Sum_probs=113.3
Q ss_pred CeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh--------hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
+.||+|++|.||+|.+ +|..|++|+....... ....+.+|++++..++|++|.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 6778999976543211 124578899999999999988777777777788999999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
++|++|.+++.... . .+..++.+++.+|.++|+.+ ++|||++|.||+++ ++.++|+|||.+..
T Consensus 81 ~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986432 1 78889999999999999999 99999999999999 78999999998864
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=3.2e-16 Score=161.44 Aligned_cols=144 Identities=19% Similarity=0.183 Sum_probs=112.4
Q ss_pred HHHHHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh----------------------hHHHHHHHHHHHH
Q 002178 618 EMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ----------------------GEKEFLTEIQFLS 675 (956)
Q Consensus 618 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------------------~~~~~~~E~~~l~ 675 (956)
++......|.+.+.||+|+||.||+|..++|+.||||++...... ....+..|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 344444458888999999999999999888999999986642200 1123577889999
Q ss_pred hcCCCc--eeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCc
Q 002178 676 RLHHRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKA 753 (956)
Q Consensus 676 ~l~h~n--Iv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~ 753 (956)
.+.|++ +.+.++. ...++||||+++++|.+.... .....++.+++.++.++|+.+ |+||||||
T Consensus 89 ~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p 153 (198)
T cd05144 89 ALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHG---IIHGDLSE 153 (198)
T ss_pred HHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCc
Confidence 998774 4444432 356899999999999776421 234578899999999999998 99999999
Q ss_pred ccEEEcCCCcEEEEeeccccccC
Q 002178 754 SNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 754 ~NILl~~~~~~kl~DfGla~~~~ 776 (956)
+||++++++.++|+|||++....
T Consensus 154 ~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 154 FNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred ccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999996543
No 448
>smart00090 RIO RIO-like kinase.
Probab=99.66 E-value=3.6e-16 Score=164.61 Aligned_cols=143 Identities=20% Similarity=0.159 Sum_probs=110.3
Q ss_pred CCCCCCeeeeeCCeEEEEEE--eCCCcEEEEEEecCCChh------------------------hHHHHHHHHHHHHhcC
Q 002178 625 NFNSSTQIGQGGYGKVYKGI--LPDGTVVAVKRAQEGSLQ------------------------GEKEFLTEIQFLSRLH 678 (956)
Q Consensus 625 ~y~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~ 678 (956)
-|++.+.||+|+||.||+|. ..+|+.||+|+++..... ....+..|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36678899999999999998 468999999988743210 0123568999999997
Q ss_pred CCc--eeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccE
Q 002178 679 HRN--LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNI 756 (956)
Q Consensus 679 h~n--Iv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NI 756 (956)
+.. +.+++++ ...++||||+++++|....... ..........++.|++.++.|||+.+. |+||||||+||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~--iiH~Dikp~NI 180 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGE--LVHGDLSEYNI 180 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCC--EEeCCCChhhE
Confidence 533 3344443 2358999999998887654222 235556678899999999999998763 99999999999
Q ss_pred EEcCCCcEEEEeeccccccC
Q 002178 757 LLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 757 Ll~~~~~~kl~DfGla~~~~ 776 (956)
+++ +++++|+|||.|....
T Consensus 181 li~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 181 LVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEE-CCCEEEEEChhhhccC
Confidence 999 8899999999987543
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.65 E-value=4.6e-16 Score=186.43 Aligned_cols=157 Identities=35% Similarity=0.566 Sum_probs=117.0
Q ss_pred CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCCCC---CCCCceeecCCCCCCCcceeeEEEeCCCCccccCCcCcCCC
Q 002178 29 DSITDPIEVSALRSIKKSLVDDYSKLSNWNRGDPCT---SNWTGVLCFNTTMDDGYLHLRELQLLNLNLSGNLSPEIGRL 105 (956)
Q Consensus 29 ~~~~~~~~~~al~~~k~~~~~~~~~l~~W~~~~~c~---~~w~gv~C~~~~~~~~~~~~~~L~L~~~~l~~~~~~~l~~l 105 (956)
...+.+.|++||+++|+++.++. ..+|+ +++|+ +.|.||.|..... .....++.|+|.++++.|.+|+.++.|
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~~~--~~~W~-g~~C~p~~~~w~Gv~C~~~~~-~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGLPL--RFGWN-GDPCVPQQHPWSGADCQFDST-KGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred ccccCchHHHHHHHHHHhcCCcc--cCCCC-CCCCCCcccccccceeeccCC-CCceEEEEEECCCCCccccCCHHHhCC
Confidence 45678899999999999986543 24896 46774 3699999953211 122357888888888888888888888
Q ss_pred CCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCcccccc-ccCCeee
Q 002178 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANL-NKTRHFH 184 (956)
Q Consensus 106 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ 184 (956)
++|+.|+|++|+|+|.+|..++++++|++|||++|+++|.+|..+++|++|+.|+|++|+++|.+|..+..+ .++..++
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~ 521 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEE
Confidence 888888888888888888888888888888888888888888888888888888888888877777766543 2344455
Q ss_pred cccCc
Q 002178 185 MNNNS 189 (956)
Q Consensus 185 L~~N~ 189 (956)
+.+|.
T Consensus 522 ~~~N~ 526 (623)
T PLN03150 522 FTDNA 526 (623)
T ss_pred ecCCc
Confidence 55443
No 450
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=6.2e-16 Score=159.58 Aligned_cols=130 Identities=22% Similarity=0.337 Sum_probs=106.5
Q ss_pred eeeeeCCeEEEEEEeCCCcEEEEEEecCCChh--------hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecC
Q 002178 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFM 702 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~ 702 (956)
.||+|+||+||+|.+ ++..|++|........ ...++.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999985 5788999986532211 1256778999999999887665555555666779999999
Q ss_pred CCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 703 SNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 703 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
+|++|.+++..... .++.+++.+|.++|+.+ ++|||++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~---------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND---------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH---------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998754211 78999999999999999 99999999999999 78999999999865
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.65 E-value=5.2e-16 Score=184.18 Aligned_cols=145 Identities=20% Similarity=0.270 Sum_probs=114.8
Q ss_pred HHHHHHHhcCCCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCC-Ch------hhHHHHHHHHHHHHhcCCCceeeeecc
Q 002178 616 YGEMALATNNFNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEG-SL------QGEKEFLTEIQFLSRLHHRNLVSLVGY 688 (956)
Q Consensus 616 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~-~~------~~~~~~~~E~~~l~~l~h~nIv~l~~~ 688 (956)
+.........|...+.||+|+||+||+|.+.+...++.++.... .. ...+.+.+|+++++.++|++++....+
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~ 404 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIY 404 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEE
Confidence 33333445566778999999999999998755433332222211 11 123568899999999999999988877
Q ss_pred cccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEe
Q 002178 689 CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVAD 768 (956)
Q Consensus 689 ~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~D 768 (956)
+......++||||+++++|.+++. ....++.+++++|.|||+.+ ++||||||+||++ +++.++|+|
T Consensus 405 ~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liD 470 (535)
T PRK09605 405 DVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLID 470 (535)
T ss_pred EEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEe
Confidence 777778899999999999999885 35678999999999999999 9999999999999 578999999
Q ss_pred eccccc
Q 002178 769 FGLSRL 774 (956)
Q Consensus 769 fGla~~ 774 (956)
||+++.
T Consensus 471 FGla~~ 476 (535)
T PRK09605 471 FGLGKY 476 (535)
T ss_pred Cccccc
Confidence 999875
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=3.8e-16 Score=171.63 Aligned_cols=128 Identities=27% Similarity=0.401 Sum_probs=108.8
Q ss_pred CcEEEEEecCCCCCHHHHHhh-cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeecc
Q 002178 693 GEQMLVYEFMSNGTLRDQLSA-KSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGL 771 (956)
Q Consensus 693 ~~~~LV~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGl 771 (956)
.+.++.|++|...+|.+|+.+ ......++...+.++.|++.|++| ++ .+|+|+||.||+...+..+||+|||+
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 357899999999999999974 344567888899999999999999 66 89999999999999999999999999
Q ss_pred ccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHh
Q 002178 772 SRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLT 827 (956)
Q Consensus 772 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~ellt 827 (956)
........ .........+...||..||+||.+.+..|+.++||||+|++++|++.
T Consensus 403 ~ts~~~~~-~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 403 VTSQDKDE-TVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eeecccCC-cccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 87665433 11112334456779999999999999999999999999999999996
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.56 E-value=1.8e-14 Score=147.11 Aligned_cols=136 Identities=23% Similarity=0.212 Sum_probs=97.5
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh--HHH----------------------HHHHHHHHHhcCCCc--e
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG--EKE----------------------FLTEIQFLSRLHHRN--L 682 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~----------------------~~~E~~~l~~l~h~n--I 682 (956)
.+.||+|+||+||+|...+++.||||++....... ... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999998789999999877532211 111 134555565654432 3
Q ss_pred eeeecccccCCcEEEEEecCCCCCHHH-HHhhcCCCCchhHHHHHHHHHHHHHHHHhhh-cCCCCEeccCCCcccEEEcC
Q 002178 683 VSLVGYCDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYLHT-EADPPVFHRDIKASNILLDH 760 (956)
Q Consensus 683 v~l~~~~~~~~~~~LV~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivH~Dlk~~NILl~~ 760 (956)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++|. .+ |+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-
Confidence 344433 24589999999854322 111110 11 5577899999999999999 87 99999999999999
Q ss_pred CCcEEEEeeccccccC
Q 002178 761 KFTAKVADFGLSRLAP 776 (956)
Q Consensus 761 ~~~~kl~DfGla~~~~ 776 (956)
++.++++|||.+....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 8999999999997543
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.55 E-value=3.1e-14 Score=139.40 Aligned_cols=135 Identities=19% Similarity=0.163 Sum_probs=114.0
Q ss_pred CCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCC--CceeeeecccccCCcEEEEEecCCCC
Q 002178 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHH--RNLVSLVGYCDEEGEQMLVYEFMSNG 705 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~nIv~l~~~~~~~~~~~LV~e~~~~g 705 (956)
+.+.||+|.++.||++...+ ..+++|....... ...+.+|+..++.++| .++.++++++...+..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35679999999999999754 7899998865433 4578899999999976 58899999888888999999999887
Q ss_pred CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 706 TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 706 sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.+..+ +......++.+++++++++|......++|+|++|+||++++.+.+++.|||.++.
T Consensus 79 ~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77554 4456677899999999999986444599999999999999999999999999874
No 455
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.52 E-value=2.1e-15 Score=177.98 Aligned_cols=263 Identities=21% Similarity=0.245 Sum_probs=193.1
Q ss_pred hcCCCCCCeeeeeCCeEEEEEEeC--CCcEEEEEEecCCC--hhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcEEE
Q 002178 623 TNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGS--LQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 623 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~~L 697 (956)
...|...+.||+|+|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++.+++...+.+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 345777788999999999887753 34567777665433 222334445777766776 9999999999999999999
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhh-hcCCCCEeccCCCcccEEEcCCC-cEEEEeecccccc
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLH-TEADPPVFHRDIKASNILLDHKF-TAKVADFGLSRLA 775 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH~Dlk~~NILl~~~~-~~kl~DfGla~~~ 775 (956)
+++|.+++++.+-+........+......+..|+..++.|+| ..+ +.|+|+||+|.+++..+ ..|++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 999999999999883222223555666778999999999999 888 99999999999999999 9999999999887
Q ss_pred CC-CCCCCccccceeccccc-CCCcccccccccC-CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccch
Q 002178 776 PV-PDIEGIVPAHVSTVVKG-TPGYLDPEYFLTH-KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMF 852 (956)
Q Consensus 776 ~~-~~~~~~~~~~~~~~~~g-t~~y~aPE~~~~~-~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~ 852 (956)
.. .. .........| ++.|+|||...+. -.....|+||.|+++.-+++|..|+........ .
T Consensus 176 ~~~~g-----~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~---------~-- 239 (601)
T KOG0590|consen 176 RNKNG-----AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG---------R-- 239 (601)
T ss_pred cccCC-----cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccc---------c--
Confidence 65 22 1233444567 9999999999885 445679999999999999999999864322110 0
Q ss_pred hhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCCCccCCC
Q 002178 853 SVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPSSSSMLK 932 (956)
Q Consensus 853 ~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~sa~e~L~ 932 (956)
....+..| .|.. ...+........+++.++++.+|..|.+.+++-.
T Consensus 240 -----------------~~~~~~~~------~~~~-----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 240 -----------------YSSWKSNK------GRFT-----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred -----------------ceeecccc------cccc-----------cCccccCChhhhhcccccccCCchhccccccccc
Confidence 00000000 0000 0111223444567888999999999999999999
Q ss_pred CCcccc
Q 002178 933 HPYVSS 938 (956)
Q Consensus 933 HP~f~~ 938 (956)
|||+..
T Consensus 286 d~~~~~ 291 (601)
T KOG0590|consen 286 DNWLSS 291 (601)
T ss_pred cccccc
Confidence 999987
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=1e-13 Score=146.31 Aligned_cols=135 Identities=23% Similarity=0.294 Sum_probs=104.8
Q ss_pred CCeee-eeCCeEEEEEEeCCCcEEEEEEecCCCh-------------hhHHHHHHHHHHHHhcCCCce--eeeecccccC
Q 002178 629 STQIG-QGGYGKVYKGILPDGTVVAVKRAQEGSL-------------QGEKEFLTEIQFLSRLHHRNL--VSLVGYCDEE 692 (956)
Q Consensus 629 ~~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~nI--v~l~~~~~~~ 692 (956)
...|| .|+.|+||++... +..++||++..... .....+.+|++++.+++|++| ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999874 67889988753211 123567889999999998875 6677664332
Q ss_pred -C---cEEEEEecCCC-CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEE
Q 002178 693 -G---EQMLVYEFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVA 767 (956)
Q Consensus 693 -~---~~~LV~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 767 (956)
+ ..++|||++++ .+|.+++... .++.. .+.+++.++.+||+.| |+||||||+|||++.++.++|+
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LI 184 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLI 184 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEE
Confidence 2 23599999997 6999988542 23332 3568899999999999 9999999999999999999999
Q ss_pred eeccccc
Q 002178 768 DFGLSRL 774 (956)
Q Consensus 768 DfGla~~ 774 (956)
|||.++.
T Consensus 185 Dfg~~~~ 191 (239)
T PRK01723 185 DFDRGEL 191 (239)
T ss_pred ECCCccc
Confidence 9998875
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.42 E-value=1.4e-14 Score=159.11 Aligned_cols=180 Identities=29% Similarity=0.495 Sum_probs=100.9
Q ss_pred cccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecc
Q 002178 130 KSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLL 209 (956)
Q Consensus 130 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 209 (956)
+.-...||+.|++. ++|..+..+..|+.|.|..|.+. .+|..+.++..|++|+|+.|+++ .+|..+..| -|+.|-+
T Consensus 75 tdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~l-pLkvli~ 150 (722)
T KOG0532|consen 75 TDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDL-PLKVLIV 150 (722)
T ss_pred cchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcC-cceeEEE
Confidence 33344455555554 44444444444555555555444 44445555555555555555554 444444443 3556666
Q ss_pred cccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcC
Q 002178 210 DNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGS 289 (956)
Q Consensus 210 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~ 289 (956)
++|+++ .+|+.++.+.+|..||.+.|.+. .+|..++++.+|+.|.+..|++...++++.
T Consensus 151 sNNkl~-~lp~~ig~~~tl~~ld~s~nei~--slpsql~~l~slr~l~vrRn~l~~lp~El~------------------ 209 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ--SLPSQLGYLTSLRDLNVRRNHLEDLPEELC------------------ 209 (722)
T ss_pred ecCccc-cCCcccccchhHHHhhhhhhhhh--hchHHhhhHHHHHHHHHhhhhhhhCCHHHh------------------
Confidence 666666 55556666666666666666665 455556665555555555555554444433
Q ss_pred CCCCCCccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhhh
Q 002178 290 IPPGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIW 342 (956)
Q Consensus 290 ~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 342 (956)
...|..||+|.|+++ .+|-.|.+|..|++|-|.+|.|+ ..|..+.
T Consensus 210 ------~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC 254 (722)
T KOG0532|consen 210 ------SLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC 254 (722)
T ss_pred ------CCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHH
Confidence 223444444444444 67778888888888888888887 5555553
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.39 E-value=3.9e-14 Score=155.52 Aligned_cols=196 Identities=25% Similarity=0.404 Sum_probs=173.4
Q ss_pred CCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCe
Q 002178 103 GRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRH 182 (956)
Q Consensus 103 ~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 182 (956)
-.|+.-...||+.|++. .+|..+..+..|+.|.|.+|.+. .+|..+.+|..|++|||+.|+++ .+|..+..|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 44666788999999999 89999999999999999999998 99999999999999999999998 7788877775 899
Q ss_pred eecccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCC
Q 002178 183 FHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (956)
Q Consensus 183 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (956)
|-+++|+++ .+|..++.++.|..||.+.|++. .+|..++++.+|+.|.+..|++. .+|..+..| .|..||+|.|+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~--~lp~El~~L-pLi~lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE--DLPEELCSL-PLIRLDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh--hCCHHHhCC-ceeeeecccCc
Confidence 999999999 88999999999999999999999 67889999999999999999997 688888854 68999999999
Q ss_pred CccCCCCCCCCCCccEEEccCCcCCcCCCCCCCcc----ccCEEEccCCc
Q 002178 263 LQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL----NITTIKLSNNK 308 (956)
Q Consensus 263 l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~----~L~~L~Ls~N~ 308 (956)
+..++-.|..+..|++|-|.+|.|+ ..|..++.. -.++|+..-++
T Consensus 223 is~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 223 ISYLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred eeecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 9999999999999999999999998 666655433 24666666664
No 459
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.39 E-value=1.7e-12 Score=148.86 Aligned_cols=140 Identities=22% Similarity=0.254 Sum_probs=101.2
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh----------------------------------------HHHHH
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG----------------------------------------EKEFL 668 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------------------------------~~~~~ 668 (956)
.+.||.|++|.||+|++++|+.||||+.+...... +-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 36799999999999999999999999976532110 01245
Q ss_pred HHHHHHHhcC-----CCceeeeecc-cccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHH-HHHHhhhc
Q 002178 669 TEIQFLSRLH-----HRNLVSLVGY-CDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR-GILYLHTE 741 (956)
Q Consensus 669 ~E~~~l~~l~-----h~nIv~l~~~-~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~~ 741 (956)
+|++.+.+++ ++++ .+-.. ....+..+|||||++|++|.++...... .. .+.+++.+++. .+..+|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~---~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GL---DRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CC---CHHHHHHHHHHHHHHHHHhC
Confidence 5666555552 3333 22222 2334567999999999999987653211 11 24456766666 47889998
Q ss_pred CCCCEeccCCCcccEEEcCCCcEEEEeeccccccC
Q 002178 742 ADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 742 ~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
| ++|+|+||.||+++.+++++++|||++..+.
T Consensus 277 g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 277 G---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred C---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8 9999999999999999999999999997664
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.36 E-value=6.5e-13 Score=152.44 Aligned_cols=201 Identities=31% Similarity=0.463 Sum_probs=113.3
Q ss_pred EEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCc-ccceeecccccccCCCCccccccccCCeeecccC
Q 002178 110 ILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLP-KLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNN 188 (956)
Q Consensus 110 ~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 188 (956)
.|+++.|.+... ...+..++.++.|++.+|.++ .+|.....+. +|+.|++++|.+. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~~~-~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLRSN-ISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccccC-chhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 455555555322 223444455666666666665 5555555553 6666666666665 44455566666666666666
Q ss_pred cCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCC
Q 002178 189 SISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMP 268 (956)
Q Consensus 189 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 268 (956)
+++ .+|...+.+++|+.|++++|+++ .+|........|++|.+++|++. ..+..+.+++++..|.+++|++...+.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~--~~~~~~~~~~~l~~l~l~~n~~~~~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII--ELLSSLSNLKNLSGLELSNNKLEDLPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce--ecchhhhhcccccccccCCceeeeccc
Confidence 666 44444445566666666666666 44444444455666666666432 345556666666666666666655544
Q ss_pred CCCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCCCCchhcC
Q 002178 269 DLSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 269 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
.+..+++|++|++++|.++ .++......+++.|++++|.+....|....
T Consensus 250 ~~~~l~~l~~L~~s~n~i~-~i~~~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 250 SIGNLSNLETLDLSNNQIS-SISSLGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred hhccccccceecccccccc-ccccccccCccCEEeccCccccccchhhhc
Confidence 5556666666666666666 444433333666666666666655444433
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.34 E-value=1e-12 Score=150.80 Aligned_cols=199 Identities=33% Similarity=0.454 Sum_probs=135.2
Q ss_pred hhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccc-cCCeeecccCcCCCCCccccCCCcccceeccccc
Q 002178 134 LLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLN-KTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNN 212 (956)
Q Consensus 134 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N 212 (956)
.|+++.|.+. .....+..++.++.|++.+|.++ .++.....++ +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 5777777764 23344555577777777777777 5566666664 7777788887777 55566777777888888888
Q ss_pred ccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCC
Q 002178 213 NLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPP 292 (956)
Q Consensus 213 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~ 292 (956)
+++ .+|...+.+++|+.|++++|+++ .+|........|++|++++|.+...+..+..+.++..|.+++|++.. ++.
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~--~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~-~~~ 249 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS--DLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLED-LPE 249 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc--cCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeee-ccc
Confidence 777 44544546677777788888776 45665555666777777777665566667777777777777777763 233
Q ss_pred CCC-ccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhh
Q 002178 293 GRL-SLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSI 341 (956)
Q Consensus 293 ~~~-~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 341 (956)
... ..+++.|++++|+++...+ ++.+.+|+.|++++|.+....|...
T Consensus 250 ~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 250 SIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred hhccccccceecccccccccccc--ccccCccCEEeccCccccccchhhh
Confidence 222 2357777888887774444 7777777888888877776555543
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=3.5e-12 Score=131.73 Aligned_cols=154 Identities=25% Similarity=0.392 Sum_probs=114.3
Q ss_pred HHHhcCCCceeeeecccccC-----CcEEEEEecCCCCCHHHHHhh--cCCCCchhHHHHHHHHHHHHHHHHhhhcCCCC
Q 002178 673 FLSRLHHRNLVSLVGYCDEE-----GEQMLVYEFMSNGTLRDQLSA--KSKEPLGFAMRLSIALGSSRGILYLHTEADPP 745 (956)
Q Consensus 673 ~l~~l~h~nIv~l~~~~~~~-----~~~~LV~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 745 (956)
-+-.+.|.||++++.|+.+. ....++.|||..|++..+|++ +....+....-.+++.||..||.|||+. .|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCc
Confidence 34455799999999998554 357899999999999999986 2334566777788999999999999986 689
Q ss_pred EeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHH
Q 002178 746 VFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLEL 825 (956)
Q Consensus 746 ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~el 825 (956)
|+|+++..+-|++..+|-+|++--.-... .+..... .........+-++|.|||.-.....+.++|||+||....||
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~--h~s~~~~-~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDST--HPSVNST-REAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred cccCCcchhheeecCCceEEecccCcccc--chhhhhh-hHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 99999999999999999888752111000 0000000 01111223466899999998777778899999999999999
Q ss_pred HhCCC
Q 002178 826 LTGMQ 830 (956)
Q Consensus 826 ltg~~ 830 (956)
.-+..
T Consensus 276 ailEi 280 (458)
T KOG1266|consen 276 AILEI 280 (458)
T ss_pred HHhee
Confidence 87644
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.28 E-value=1e-11 Score=140.69 Aligned_cols=166 Identities=19% Similarity=0.195 Sum_probs=127.8
Q ss_pred eCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHH
Q 002178 645 LPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMR 724 (956)
Q Consensus 645 ~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~ 724 (956)
..++.+|.|...+...........+-++.++.++||||+++++.+..++..|||+|.+ ..|..++.+.+ ....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l~-----~~~v 106 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKELG-----KEEV 106 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHhH-----HHHH
Confidence 3478888888887655433455677889999999999999999999999999999998 47888886643 5566
Q ss_pred HHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCCCccccceecccccCCCccccccc
Q 002178 725 LSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYF 804 (956)
Q Consensus 725 ~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 804 (956)
...+.||+.||.|||..++ ++|++|.-+.|+++..|+.||++|.++........ ......--..|..|+.+
T Consensus 107 ~~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-------~~~~~~~~~s~~~P~~~ 177 (690)
T KOG1243|consen 107 CLGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-------PAKSLYLIESFDDPEEI 177 (690)
T ss_pred HHHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-------ccccchhhhcccChhhc
Confidence 7788999999999997664 99999999999999999999999998865432110 00111112246667655
Q ss_pred ccCCCCCcccchhHHHHHHHHHhC
Q 002178 805 LTHKLTDKSDVYSLGVVFLELLTG 828 (956)
Q Consensus 805 ~~~~~~~~sDVwS~G~ll~elltg 828 (956)
.... -..|.|.|||+++|++.|
T Consensus 178 ~~s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 178 DPSE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred Cccc--cchhhhhHHHHHHHHhCc
Confidence 4333 346999999999999998
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.25 E-value=2.4e-11 Score=140.74 Aligned_cols=143 Identities=21% Similarity=0.207 Sum_probs=94.6
Q ss_pred cCCCCCCeeeeeCCeEEEEEEeCC-CcEEEEEEecCCChh----------------------------------hHH---
Q 002178 624 NNFNSSTQIGQGGYGKVYKGILPD-GTVVAVKRAQEGSLQ----------------------------------GEK--- 665 (956)
Q Consensus 624 ~~y~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~--- 665 (956)
..|+. +.||+|++|.||+|++++ |+.||||+.+..... -.+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999887 999999998753210 011
Q ss_pred ---HHHHHHHHHHhcC----CCceeeeecccc-cCCcEEEEEecCCCCCHHHH--HhhcCC--CCchhHHHHHHHHHHHH
Q 002178 666 ---EFLTEIQFLSRLH----HRNLVSLVGYCD-EEGEQMLVYEFMSNGTLRDQ--LSAKSK--EPLGFAMRLSIALGSSR 733 (956)
Q Consensus 666 ---~~~~E~~~l~~l~----h~nIv~l~~~~~-~~~~~~LV~e~~~~gsL~~~--l~~~~~--~~l~~~~~~~i~~~ia~ 733 (956)
++.+|+..+.+++ +.+.+.+-.++. .....+|||||++|+++.++ +...+. ..+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 2344444444432 333333323322 24567899999999999874 322221 123333333444443
Q ss_pred HHHHhhhcCCCCEeccCCCcccEEEcCCC----cEEEEeeccccccCC
Q 002178 734 GILYLHTEADPPVFHRDIKASNILLDHKF----TAKVADFGLSRLAPV 777 (956)
Q Consensus 734 gL~yLH~~~~~~ivH~Dlk~~NILl~~~~----~~kl~DfGla~~~~~ 777 (956)
...| ++|+|+||.||+++.++ ++++.|||++..++.
T Consensus 277 -----f~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 -----FRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -----HhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3567 99999999999999988 999999999987653
No 465
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.19 E-value=4.5e-11 Score=119.79 Aligned_cols=131 Identities=16% Similarity=0.115 Sum_probs=96.8
Q ss_pred CCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCcee-eeecccccCCcEEEEEecCCCCCH
Q 002178 629 STQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLV-SLVGYCDEEGEQMLVYEFMSNGTL 707 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv-~l~~~~~~~~~~~LV~e~~~~gsL 707 (956)
.+.++.|.++.||++... ++.|++|....... ....+..|+++++.+.+.+++ +++.+.. +..++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 356899999999999874 77899998765432 223567899999988655544 4554433 345899999999887
Q ss_pred HHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcC--CCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 708 RDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA--DPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 708 ~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
.+.. . ....++.+++++|+.||+.+ ...++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6430 1 11245678999999999876 22359999999999999 66899999998763
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=3.7e-11 Score=135.49 Aligned_cols=249 Identities=21% Similarity=0.228 Sum_probs=179.2
Q ss_pred cCCCCCCeeee--eCCeEEEEEEe---CCCcEEEEEEecC--CChhhHHHHHHHHHHHHhcC-CCceeeeecccccCCcE
Q 002178 624 NNFNSSTQIGQ--GGYGKVYKGIL---PDGTVVAVKRAQE--GSLQGEKEFLTEIQFLSRLH-HRNLVSLVGYCDEEGEQ 695 (956)
Q Consensus 624 ~~y~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~-h~nIv~l~~~~~~~~~~ 695 (956)
..|.+...+|. |.+|.||.+.. .++..+|+|+-+. ........=.+|+...++++ |+|.++.+..+...+..
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcc
Confidence 34666788999 99999999986 3688899997332 11122233356777777774 99999988899999999
Q ss_pred EEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHH----HHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeec
Q 002178 696 MLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSR----GILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFG 770 (956)
Q Consensus 696 ~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfG 770 (956)
++-+|++ +.+|.++.+.... .++....+.+..+..+ |+.++|... ++|-|+||.||+...+ ...+++|||
T Consensus 194 fiqtE~~-~~sl~~~~~~~~~-~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 194 FIQTELC-GESLQSYCHTPCN-FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeeccc-cchhHHhhhcccc-cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 9999998 6788888876432 3666777788888888 999999998 9999999999999999 899999999
Q ss_pred cccccCCCCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002178 771 LSRLAPVPDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 771 la~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
+...+........ ........|...|++||...+ .++...|+|++|.+..|..++..+...+.+. .|
T Consensus 269 ~v~~i~~~~~~~~--~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~-~W--------- 335 (524)
T KOG0601|consen 269 LVSKISDGNFSSV--FKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNS-SW--------- 335 (524)
T ss_pred eeEEccCCccccc--eeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCC-Cc---------
Confidence 9988765543221 111223357788999998754 4588999999999999999987776544210 00
Q ss_pred chhhccCCC--CCCChHHHHHHHHHHHHhcccCCCCCCCHHHHH
Q 002178 851 MFSVIDGNM--GSYPSECVEKFIKLALKCCQDETDARPSMSEVM 892 (956)
Q Consensus 851 ~~~~~~~~~--~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~ 892 (956)
.-+++.. ..+-+.....+......+++.++..|++.+.+.
T Consensus 336 --~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~ 377 (524)
T KOG0601|consen 336 --SQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILT 377 (524)
T ss_pred --cccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHh
Confidence 0011111 011112234555577888888888888776554
No 467
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=3.2e-12 Score=136.92 Aligned_cols=209 Identities=19% Similarity=0.225 Sum_probs=96.4
Q ss_pred CCCCCCEEEccCCCCcccCC--cccccCcccchhhccCcCCCCCC--CCccCCCcccceeecccccccCCCCcc-ccccc
Q 002178 104 RLSYLTILDFMWNKISGSIP--KEIGNIKSLELLLLNGNELTGSL--PEELGYLPKLDRIQIDQNYISGSLPKS-FANLN 178 (956)
Q Consensus 104 ~l~~L~~L~Ls~N~l~~~ip--~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~ 178 (956)
++.+|+.+.|.+..+. ..+ .....|++++.||||.|-|...- -.....|++|+.|+|+.|++....... -..++
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~ 197 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLS 197 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhh
Confidence 4555566666555544 222 23445555666666665555221 122344555555555555554222211 12344
Q ss_pred cCCeeecccCcCCCC-CccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEe
Q 002178 179 KTRHFHMNNNSISGQ-IPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLS 257 (956)
Q Consensus 179 ~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~ 257 (956)
+|+.|.|+.|.|+-. +-..+..+|+|+.|+|..|...+........+..|++|||++|++.....-...+.++.|+.|+
T Consensus 198 ~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 198 HLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred hhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 555555555555411 1112233455555555555322222222333444555555555543221113344444455555
Q ss_pred ccCCCCccCC-CC------CCCCCCccEEEccCCcCCcCCCCCCCccccCEEEccCCcCCC-CCchhcCCCCcCCeEecc
Q 002178 258 LRNCSLQGPM-PD------LSRIPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNKLTG-TIPSNFSGLPRLQRLFIA 329 (956)
Q Consensus 258 Ls~N~l~~~~-~~------l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~ 329 (956)
++.|.+..+. ++ ...++ +|++|+++.|++.. ..-..+..+++|+.|.+.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~-----------------------kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~ 334 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFP-----------------------KLEYLNISENNIRDWRSLNHLRTLENLKHLRIT 334 (505)
T ss_pred ccccCcchhcCCCccchhhhcccc-----------------------cceeeecccCccccccccchhhccchhhhhhcc
Confidence 5544444311 11 12233 45555555555531 112345567778888888
Q ss_pred cccCCCc
Q 002178 330 NNSLSGS 336 (956)
Q Consensus 330 ~N~l~~~ 336 (956)
.|.|..+
T Consensus 335 ~n~ln~e 341 (505)
T KOG3207|consen 335 LNYLNKE 341 (505)
T ss_pred ccccccc
Confidence 8888743
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=6.2e-12 Score=134.74 Aligned_cols=206 Identities=22% Similarity=0.220 Sum_probs=157.4
Q ss_pred ceeeEEEeCCCCccccCC-cCcCCCCCCCEEEccCCCCcc--cCCcccccCcccchhhccCcCCCCCCCCc-cCCCcccc
Q 002178 82 LHLRELQLLNLNLSGNLS-PEIGRLSYLTILDFMWNKISG--SIPKEIGNIKSLELLLLNGNELTGSLPEE-LGYLPKLD 157 (956)
Q Consensus 82 ~~~~~L~L~~~~l~~~~~-~~l~~l~~L~~L~Ls~N~l~~--~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~ 157 (956)
..++++.|.++.....-. .....+++++.||||.|-|.. .+-.-...|++|+.|+|+.|++.--.... -..+++|+
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~lK 200 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHLK 200 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhhh
Confidence 457777888876654322 356789999999999998875 23344577899999999999987333322 23578999
Q ss_pred eeecccccccCC-CCccccccccCCeeecccCcCCCCCccccCCCcccceecccccccCCCC-CcccCCcchhhhhcccC
Q 002178 158 RIQIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYL-PPELSELPKLLILQLDN 235 (956)
Q Consensus 158 ~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~Ls~ 235 (956)
.|.|+.|.|+.. +......+|+|+.|+|..|............+..|++|+|++|++.... -...+.++.|+.|+++.
T Consensus 201 ~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~ 280 (505)
T KOG3207|consen 201 QLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSS 280 (505)
T ss_pred eEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhhccc
Confidence 999999999832 2344667899999999999643344445566789999999999988432 14578899999999999
Q ss_pred CcCCCCCCccc-----ccCCCCCcEEeccCCCCccC--CCCCCCCCCccEEEccCCcCC
Q 002178 236 NNFEGTTIPAS-----YSNMSKLLKLSLRNCSLQGP--MPDLSRIPNLGYLDLSSNQLN 287 (956)
Q Consensus 236 N~l~~~~~p~~-----~~~l~~L~~L~Ls~N~l~~~--~~~l~~l~~L~~L~Ls~N~l~ 287 (956)
+.+..+..|+. ...+++|++|+++.|++... ...+..+++|+.|.+..|.|+
T Consensus 281 tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln 339 (505)
T KOG3207|consen 281 TGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLN 339 (505)
T ss_pred cCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccc
Confidence 99988777776 56789999999999999653 334677778888888888886
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.15 E-value=4.2e-12 Score=129.12 Aligned_cols=131 Identities=22% Similarity=0.305 Sum_probs=63.7
Q ss_pred CCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEE
Q 002178 200 RLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYL 279 (956)
Q Consensus 200 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L 279 (956)
....|++||||+|.|+ .+.++..-+|+++.|++|+|.+.. + ..+..+++|+.||||+|.++....--..+-+++.|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~--v-~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT--V-QNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee--e-hhhhhcccceEeecccchhHhhhhhHhhhcCEeee
Confidence 3445555555555555 344444445555555555555542 1 22445555555555555554433322333445555
Q ss_pred EccCCcCCcCCCCCCCccccCEEEccCCcCCCCC-chhcCCCCcCCeEecccccCCC
Q 002178 280 DLSSNQLNGSIPPGRLSLNITTIKLSNNKLTGTI-PSNFSGLPRLQRLFIANNSLSG 335 (956)
Q Consensus 280 ~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 335 (956)
.|+.|.|. .+....-.-+|..||+++|+|.... -..+++||-|+.|.|.+|.|.+
T Consensus 358 ~La~N~iE-~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 358 KLAQNKIE-TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred ehhhhhHh-hhhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 55555554 1111111114555555555554322 2445666666666666666664
No 470
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.14 E-value=7e-13 Score=138.44 Aligned_cols=180 Identities=19% Similarity=0.293 Sum_probs=93.2
Q ss_pred cccceeecccccccCCCCcc----ccccccCCeeecccCcCCCCCc-------------cccCCCcccceecccccccCC
Q 002178 154 PKLDRIQIDQNYISGSLPKS----FANLNKTRHFHMNNNSISGQIP-------------PELSRLPSLVHMLLDNNNLTG 216 (956)
Q Consensus 154 ~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~L~L~~N~l~~~~p-------------~~l~~l~~L~~L~L~~N~l~~ 216 (956)
++|++||||+|-|...-+.. +.++..|+.|+|.+|.+...-- .....-+.|+++..++|++..
T Consensus 92 ~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen 171 (382)
T KOG1909|consen 92 PKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLEN 171 (382)
T ss_pred CceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeecccccc
Confidence 45555555555554332222 2345555666666665541111 112334566777777777663
Q ss_pred CC----CcccCCcchhhhhcccCCcCC--CC-CCcccccCCCCCcEEeccCCCCccCCC-----CCCCCCCccEEEccCC
Q 002178 217 YL----PPELSELPKLLILQLDNNNFE--GT-TIPASYSNMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSN 284 (956)
Q Consensus 217 ~~----p~~l~~l~~L~~L~Ls~N~l~--~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~-----~l~~l~~L~~L~Ls~N 284 (956)
-. ...|...+.|+.+.++.|.|. |+ .+...|..+++|+.|||.+|.++.... .+..++.|+.|++++|
T Consensus 172 ~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dc 251 (382)
T KOG1909|consen 172 GGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDC 251 (382)
T ss_pred ccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeeccccc
Confidence 22 233455566777777777663 11 123345667777777777777654221 2566666777777777
Q ss_pred cCCcCCCCCCC------ccccCEEEccCCcCCC----CCchhcCCCCcCCeEecccccC
Q 002178 285 QLNGSIPPGRL------SLNITTIKLSNNKLTG----TIPSNFSGLPRLQRLFIANNSL 333 (956)
Q Consensus 285 ~l~~~~p~~~~------~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l 333 (956)
.+...-...+. ..+|+.|.|.+|.++. .+.......+.|+.|+|++|.+
T Consensus 252 ll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 252 LLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 66533222111 1245555555555543 2223334455555555555555
No 471
>PLN03150 hypothetical protein; Provisional
Probab=99.12 E-value=5.7e-11 Score=142.74 Aligned_cols=110 Identities=26% Similarity=0.426 Sum_probs=97.7
Q ss_pred ccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceeccc
Q 002178 131 SLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLD 210 (956)
Q Consensus 131 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 210 (956)
.++.|+|++|.++|.+|..++.|++|+.|+|++|+|+|.+|..+..+++|+.|+|++|+++|.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccCCc-chhhhhcccCCcCCC
Q 002178 211 NNNLTGYLPPELSEL-PKLLILQLDNNNFEG 240 (956)
Q Consensus 211 ~N~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~ 240 (956)
+|+++|.+|..+..+ .++..+++++|...+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcccc
Confidence 999999999888763 467788888887643
No 472
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.12 E-value=5.7e-10 Score=112.49 Aligned_cols=137 Identities=17% Similarity=0.104 Sum_probs=98.2
Q ss_pred CCeeeeeCCeEEEEEEeCC-------CcEEEEEEecCCC---------------h-------hhHHHH----HHHHHHHH
Q 002178 629 STQIGQGGYGKVYKGILPD-------GTVVAVKRAQEGS---------------L-------QGEKEF----LTEIQFLS 675 (956)
Q Consensus 629 ~~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~---------------~-------~~~~~~----~~E~~~l~ 675 (956)
...||.|.-+.||.|...+ +..+|||+.+... . ...+.+ .+|++.|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3579999999999998543 4799999765210 0 001222 37999999
Q ss_pred hcCC--CceeeeecccccCCcEEEEEecCCCCCHHH-HHhhcCCCCchhHHHHHHHHHHHHHHHHh-hhcCCCCEeccCC
Q 002178 676 RLHH--RNLVSLVGYCDEEGEQMLVYEFMSNGTLRD-QLSAKSKEPLGFAMRLSIALGSSRGILYL-HTEADPPVFHRDI 751 (956)
Q Consensus 676 ~l~h--~nIv~l~~~~~~~~~~~LV~e~~~~gsL~~-~l~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivH~Dl 751 (956)
++.. -++.+++++ ...++||||+.+..+.. .++. ..++..+...+..+++.+|.++ |+.+ +||+||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd---~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDL 151 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD---AKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADL 151 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc---cccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCC
Confidence 9853 355566654 46789999996643322 2322 1244455667889999999999 7888 999999
Q ss_pred CcccEEEcCCCcEEEEeeccccccC
Q 002178 752 KASNILLDHKFTAKVADFGLSRLAP 776 (956)
Q Consensus 752 k~~NILl~~~~~~kl~DfGla~~~~ 776 (956)
++.||++++ +.++|+|||.|....
T Consensus 152 s~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEEC-CcEEEEECCCceeCC
Confidence 999999974 689999999987654
No 473
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=1.4e-11 Score=125.47 Aligned_cols=132 Identities=27% Similarity=0.347 Sum_probs=74.5
Q ss_pred cccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCcccc
Q 002178 220 PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSLNI 299 (956)
Q Consensus 220 ~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~~L 299 (956)
.....+..|++||||+|.|+ .+..+..-+++++.|++|+|.|..... +..+++|+.||||+|.++
T Consensus 278 ~~~dTWq~LtelDLS~N~I~--~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls------------ 342 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT--QIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLA------------ 342 (490)
T ss_pred EecchHhhhhhccccccchh--hhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhH------------
Confidence 33444455666666666665 344555555566666666665553332 555555555555555554
Q ss_pred CEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCC--C-CCCCCcE
Q 002178 300 TTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGS--F-NIPPNVT 376 (956)
Q Consensus 300 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~--~-~~~~l~~ 376 (956)
.+-.+-..|-+.+.|.|++|.|. .+..+.+| -+|..||+++|++..+..- . .+|-+..
T Consensus 343 ------------~~~Gwh~KLGNIKtL~La~N~iE-----~LSGL~KL--YSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~ 403 (490)
T KOG1259|consen 343 ------------ECVGWHLKLGNIKTLKLAQNKIE-----TLSGLRKL--YSLVNLDLSSNQIEELDEVNHIGNLPCLET 403 (490)
T ss_pred ------------hhhhhHhhhcCEeeeehhhhhHh-----hhhhhHhh--hhheeccccccchhhHHHhcccccccHHHH
Confidence 22233334555566666666654 23333332 2455677777777666542 2 4788888
Q ss_pred EEecCCccc
Q 002178 377 VRLRGNPFC 385 (956)
Q Consensus 377 l~l~~Np~~ 385 (956)
+.|.+||..
T Consensus 404 l~L~~NPl~ 412 (490)
T KOG1259|consen 404 LRLTGNPLA 412 (490)
T ss_pred HhhcCCCcc
Confidence 999999974
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.08 E-value=1.3e-10 Score=131.24 Aligned_cols=246 Identities=20% Similarity=0.227 Sum_probs=174.0
Q ss_pred HHHHhcCCCCCCeeeeeCCeEEEEEEeC--CCcEEEEEEecCCChhhH--HHHHHHHHHHHhc-CCCceeeeecccccCC
Q 002178 619 MALATNNFNSSTQIGQGGYGKVYKGILP--DGTVVAVKRAQEGSLQGE--KEFLTEIQFLSRL-HHRNLVSLVGYCDEEG 693 (956)
Q Consensus 619 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~--~~~~~E~~~l~~l-~h~nIv~l~~~~~~~~ 693 (956)
......+|..+..||.|.|+.|++...+ ++..+++|.......... ..-..|+-+...+ .|.+++..+..+....
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 3344567888999999999999998744 578899998775433322 2224566666665 4888888888887777
Q ss_pred cEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC-CcEEEEeeccc
Q 002178 694 EQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK-FTAKVADFGLS 772 (956)
Q Consensus 694 ~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~-~~~kl~DfGla 772 (956)
..++=-||++++++.... .....+++..++++..|++.++.++|+.. ++|+|+||+||++..+ +.-+++|||.+
T Consensus 340 ~~~ip~e~~~~~s~~l~~--~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRS--VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhh--HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccc
Confidence 888999999999987766 22345778889999999999999999998 9999999999999886 88999999998
Q ss_pred cccCCCCCCCccccceecccccCCCcc--cccccccCCCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhccc
Q 002178 773 RLAPVPDIEGIVPAHVSTVVKGTPGYL--DPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSM 850 (956)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~ 850 (956)
..+... ........++. +++......+..+.|++|||.-+.|.+++...-.... .
T Consensus 415 t~~~~~----------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------------~ 471 (524)
T KOG0601|consen 415 TRLAFS----------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------------Q 471 (524)
T ss_pred ccccee----------cccccccccccccchhhccccccccccccccccccccccccCcccCcccc-------------c
Confidence 643211 11122333444 5555566778899999999999999998854322211 1
Q ss_pred chhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 002178 851 MFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPSMSEVMR 893 (956)
Q Consensus 851 ~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs~~~v~~ 893 (956)
+..+..+.....+... ..+..+.+.....++..||.+.+...
T Consensus 472 ~~~i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~ 513 (524)
T KOG0601|consen 472 SLTIRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSL 513 (524)
T ss_pred ceeeecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcc
Confidence 1122223333333333 66666666677777777777665543
No 475
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.08 E-value=9.8e-12 Score=130.02 Aligned_cols=256 Identities=21% Similarity=0.226 Sum_probs=169.8
Q ss_pred cCcCCCCCCCEEEccCCCCcc----cCCcccccCcccchhhccCcC---CCCCCCCccCCCcccceeecccccccCCCCc
Q 002178 100 PEIGRLSYLTILDFMWNKISG----SIPKEIGNIKSLELLLLNGNE---LTGSLPEELGYLPKLDRIQIDQNYISGSLPK 172 (956)
Q Consensus 100 ~~l~~l~~L~~L~Ls~N~l~~----~ip~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 172 (956)
+.+..+..++.|+||+|.|.. .+-..+.+.++|+..++|+=- +...+|+.+. .+..
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~-----------------~l~~ 86 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALK-----------------MLSK 86 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHH-----------------HHHH
Confidence 456677788888888888753 334455666677777776521 1122222221 1224
Q ss_pred cccccccCCeeecccCcCCCCCccc----cCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCccccc
Q 002178 173 SFANLNKTRHFHMNNNSISGQIPPE----LSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYS 248 (956)
Q Consensus 173 ~~~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~ 248 (956)
++...++|++|+||+|-|...-+.. +.++.+|++|+|.+|.+.-.--..++ ..|..|. .|.. ..
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~--~al~~l~--~~kk--------~~ 154 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLG--RALFELA--VNKK--------AA 154 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHH--HHHHHHH--HHhc--------cC
Confidence 5566778999999999887544433 45678888888888887732222222 2344444 2222 12
Q ss_pred CCCCCcEEeccCCCCccCCC-----CCCCCCCccEEEccCCcCCcCCCC-----CCCccccCEEEccCCcCCC----CCc
Q 002178 249 NMSKLLKLSLRNCSLQGPMP-----DLSRIPNLGYLDLSSNQLNGSIPP-----GRLSLNITTIKLSNNKLTG----TIP 314 (956)
Q Consensus 249 ~l~~L~~L~Ls~N~l~~~~~-----~l~~l~~L~~L~Ls~N~l~~~~p~-----~~~~~~L~~L~Ls~N~l~~----~~p 314 (956)
+-++|+.+..++|++..... .|...+.|+.+.+++|.|...--. .....+|+.|||.+|-++. .+.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 23678899999998876443 267778999999999988622110 1123489999999998874 345
Q ss_pred hhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCC-----CCC-CCCCCcEEEecCCcc
Q 002178 315 SNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNIS-----GSF-NIPPNVTVRLRGNPF 384 (956)
Q Consensus 315 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~-----~~~-~~~~l~~l~l~~Np~ 384 (956)
..+..+++|+.|+++++.+...--.+|..--.=..+.|++|.|++|.++.=. ... ..|.+..|+|++|-+
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 6788899999999999999977766665433333678999999999998521 112 378889999999998
No 476
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=1.5e-09 Score=104.38 Aligned_cols=143 Identities=22% Similarity=0.233 Sum_probs=104.7
Q ss_pred CCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCCh--------hhHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEE
Q 002178 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL--------QGEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVY 699 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~ 699 (956)
....+-||+-+.|+++.+ .|+...||.-..... -..++..+|++.+.+.+--.|.-..-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 467899999999999998 567777774322111 11346678999998886444444444555556667999
Q ss_pred ecCCC-CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCC---cEEEEeeccccc
Q 002178 700 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRL 774 (956)
Q Consensus 700 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~DfGla~~ 774 (956)
||+++ .++.+++................+.+|-+.+.-||..+ |||+||..+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 99965 48888887654433333444678888999999999999 99999999999997665 458999999864
No 477
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=3.7e-11 Score=138.20 Aligned_cols=247 Identities=26% Similarity=0.301 Sum_probs=121.0
Q ss_pred CCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCee
Q 002178 104 RLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHF 183 (956)
Q Consensus 104 ~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 183 (956)
.+..++.++++.|.+.. +-..+..+++|+.|++.+|+|. .+...+..+++|++|+|++|+|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 34445555555555552 2233555556666666666655 33333555566666666666655332 23444446666
Q ss_pred ecccCcCCCCCccccCCCcccceecccccccCCCCC-cccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCC
Q 002178 184 HMNNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCS 262 (956)
Q Consensus 184 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~ 262 (956)
++++|.|+.. ..+..+++|+.+++++|++...-+ . +..+.+|+.+++.+|.+.. ...+..+..+..+++..|.
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~---i~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE---IEGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc---ccchHHHHHHHHhhccccc
Confidence 6666666521 223345566666666666663322 1 3555566666666666642 2333334444444555555
Q ss_pred CccCCCCCCCCC--CccEEEccCCcCCcCCC-CCCCccccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCCCcCCh
Q 002178 263 LQGPMPDLSRIP--NLGYLDLSSNQLNGSIP-PGRLSLNITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLSGSIPS 339 (956)
Q Consensus 263 l~~~~~~l~~l~--~L~~L~Ls~N~l~~~~p-~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 339 (956)
++..-+ +..+. .|+.+++++|.+. .++ ......++..|++++|++... ..+...+.+..+.+..|.+... ..
T Consensus 220 i~~~~~-l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~ 294 (414)
T KOG0531|consen 220 ISKLEG-LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALS-EA 294 (414)
T ss_pred ceeccC-cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcch-hh
Confidence 543222 11111 2566666666665 331 111223566666666665532 2234455566666666665522 11
Q ss_pred hhhhhccCCCCcceEEEccCCCCCCC
Q 002178 340 SIWQSRTLNATETFILDFQNNNLTNI 365 (956)
Q Consensus 340 ~~~~l~~l~~~~L~~L~L~~N~L~~l 365 (956)
....-.......+..+.+..|.+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
T KOG0531|consen 295 ISQEYITSAAPTLVTLTLELNPIRKI 320 (414)
T ss_pred hhccccccccccccccccccCccccc
Confidence 11110112334455666666666553
No 478
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.05 E-value=7.6e-11 Score=139.00 Aligned_cols=210 Identities=21% Similarity=0.270 Sum_probs=144.8
Q ss_pred HhcCCCCCCeeeeeCCeEEEEEEeC-CCcEEEEEEecCCChh---hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEE
Q 002178 622 ATNNFNSSTQIGQGGYGKVYKGILP-DGTVVAVKRAQEGSLQ---GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQML 697 (956)
Q Consensus 622 ~~~~y~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~L 697 (956)
..+.+.+.+-+-+|.++.++.+.-. .|...+.|.......- .-+....+-.+.-..++|-+++..--+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4466667778888999999877632 3433444433221111 11112222222222345766666555556678899
Q ss_pred EEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 698 VYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 698 V~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
|++|..+++|...++..+ ..+..........+.++++|||... +.|+|++|.|.+...++..+++|||.......
T Consensus 882 ~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccccc
Confidence 999999999999997654 3444445556666788999999987 89999999999999999999999984432211
Q ss_pred C----CC-----------------CCcc---ccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCCCCC
Q 002178 778 P----DI-----------------EGIV---PAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQPIS 833 (956)
Q Consensus 778 ~----~~-----------------~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~pf~ 833 (956)
- +. .... .........||+.|.+||...+......+|+|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 00 0000 1122345679999999999999999999999999999999999999997
Q ss_pred CCc
Q 002178 834 HGK 836 (956)
Q Consensus 834 ~~~ 836 (956)
...
T Consensus 1037 a~t 1039 (1205)
T KOG0606|consen 1037 AET 1039 (1205)
T ss_pred Ccc
Confidence 543
No 479
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.05 E-value=3.7e-11 Score=118.70 Aligned_cols=118 Identities=32% Similarity=0.504 Sum_probs=27.4
Q ss_pred cCCCCcccCCcccccCcccchhhccCcCCCCCCCCccC-CCcccceeecccccccCCCCccccccccCCeeecccCcCCC
Q 002178 114 MWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELG-YLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISG 192 (956)
Q Consensus 114 s~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 192 (956)
..+.|. .++ .+.+..++++|+|++|.|+ .+. .++ .+.+|+.|+|++|.|+.. +.+..+++|++|++++|+|+.
T Consensus 5 t~~~i~-~~~-~~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~ 78 (175)
T PF14580_consen 5 TANMIE-QIA-QYNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS 78 (175)
T ss_dssp -----------------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S
T ss_pred cccccc-ccc-ccccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc
Confidence 334444 333 3555667788888888887 333 454 467777888888877733 245566666677777776663
Q ss_pred CCcccc-CCCcccceecccccccCCCCC-cccCCcchhhhhcccCCcC
Q 002178 193 QIPPEL-SRLPSLVHMLLDNNNLTGYLP-PELSELPKLLILQLDNNNF 238 (956)
Q Consensus 193 ~~p~~l-~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l 238 (956)
+...+ ..+++|++|+|++|+|...-. ..+..+++|+.|+|.+|++
T Consensus 79 -i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv 125 (175)
T PF14580_consen 79 -ISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPV 125 (175)
T ss_dssp --CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GG
T ss_pred -cccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcc
Confidence 32222 345666666666666653211 2233344444444444444
No 480
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.02 E-value=1.4e-09 Score=113.97 Aligned_cols=142 Identities=23% Similarity=0.349 Sum_probs=109.6
Q ss_pred CeeeeeCCeEEEEEEeCCCcEEEEEEecCCCh-hhHHHHHHHHHHHHhcCCC--ceeeeecccccC---CcEEEEEecCC
Q 002178 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL-QGEKEFLTEIQFLSRLHHR--NLVSLVGYCDEE---GEQMLVYEFMS 703 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~--nIv~l~~~~~~~---~~~~LV~e~~~ 703 (956)
+.|+.|.++.||++...+|+.+++|....... .....+..|+++++.+.+. ++.+++.+.... +..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 56899999999999987778999998765332 1345778899999999763 456777777654 36789999999
Q ss_pred CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcC-----------------------------------------
Q 002178 704 NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEA----------------------------------------- 742 (956)
Q Consensus 704 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------------- 742 (956)
|.++.+.+.. ..++...+..++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 84 GRVLRDRLLR---PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 9888775531 23666777788888888888888521
Q ss_pred ------------CCCEeccCCCcccEEEcC--CCcEEEEeeccccc
Q 002178 743 ------------DPPVFHRDIKASNILLDH--KFTAKVADFGLSRL 774 (956)
Q Consensus 743 ------------~~~ivH~Dlk~~NILl~~--~~~~kl~DfGla~~ 774 (956)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 235799999999999998 66789999998864
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=9.3e-11 Score=115.85 Aligned_cols=109 Identities=31% Similarity=0.436 Sum_probs=31.1
Q ss_pred cCCCCCCCEEEccCCCCcccCCcccc-cCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccc-ccccc
Q 002178 102 IGRLSYLTILDFMWNKISGSIPKEIG-NIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSF-ANLNK 179 (956)
Q Consensus 102 l~~l~~L~~L~Ls~N~l~~~ip~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~ 179 (956)
+.+...+++|+|++|.|+. |. .++ .+.+|+.|||++|.|+ .++ .+..+++|++|+|++|+|+. +...+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-cc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 3344456677777777662 32 344 3566777777777766 332 45666677777777777763 33333 35667
Q ss_pred CCeeecccCcCCCCC-ccccCCCcccceecccccccC
Q 002178 180 TRHFHMNNNSISGQI-PPELSRLPSLVHMLLDNNNLT 215 (956)
Q Consensus 180 L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~ 215 (956)
|++|+|++|+|...- -..+..+++|+.|+|.+|.++
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 777777777665321 134555667777777777665
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.7e-09 Score=103.40 Aligned_cols=131 Identities=22% Similarity=0.305 Sum_probs=98.8
Q ss_pred CeeeeeCCeEEEEEEeCCCcEEEEEEecCCChh--------hHHHHHHHHHHHHhcCCCceeeeecccccCCcEEEEEec
Q 002178 630 TQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQ--------GEKEFLTEIQFLSRLHHRNLVSLVGYCDEEGEQMLVYEF 701 (956)
Q Consensus 630 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~LV~e~ 701 (956)
..+++|+-+.+|.+.+. |..+++|.-...... ...+-.+|++++++++--.|...+=|..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999774 344667643322211 123557899999998765555555566677788899999
Q ss_pred CCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 702 MSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 702 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
++|-.|.+.+... ...++..+-.-+.-||..+ |+|+||.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA---------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888654 2345666667778899999 99999999999998765 99999999875
No 483
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.00 E-value=3e-11 Score=138.93 Aligned_cols=217 Identities=22% Similarity=0.278 Sum_probs=126.2
Q ss_pred CCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeec
Q 002178 106 SYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHM 185 (956)
Q Consensus 106 ~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 185 (956)
+.++.++...+.+.+.--. ...+..++.+++..|.+. .+-..+..+++|+.|++.+|+|... ...+..+++|++|+|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~l 125 (414)
T KOG0531|consen 49 SDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDL 125 (414)
T ss_pred chhhhhcchhccccchhhh-HHHhHhHHhhccchhhhh-hhhcccccccceeeeeccccchhhc-ccchhhhhcchheec
Confidence 3455566655554421111 145677788888888887 3445577778888888888888733 333667777777788
Q ss_pred ccCcCCCCCccccCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCccc-ccCCCCCcEEeccCCCCc
Q 002178 186 NNNSISGQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPAS-YSNMSKLLKLSLRNCSLQ 264 (956)
Q Consensus 186 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~-~~~l~~L~~L~Ls~N~l~ 264 (956)
++|.|+...+ +..++.|+.|++++|.|+.. ..+..++.|+.+++++|++... ... ...+.+|+.+++.+|.+.
T Consensus 126 s~N~I~~i~~--l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~i--e~~~~~~~~~l~~l~l~~n~i~ 199 (414)
T KOG0531|consen 126 SFNKITKLEG--LSTLTLLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDI--ENDELSELISLEELDLGGNSIR 199 (414)
T ss_pred cccccccccc--hhhccchhhheeccCcchhc--cCCccchhhhcccCCcchhhhh--hhhhhhhccchHHHhccCCchh
Confidence 8777774433 44556677777777777732 3455567777777777777642 221 456666777777777665
Q ss_pred cCCCCCCCCCCccEEEccCCcCCcCCCCCCCcc--ccCEEEccCCcCCCCCchhcCCCCcCCeEecccccCC
Q 002178 265 GPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL--NITTIKLSNNKLTGTIPSNFSGLPRLQRLFIANNSLS 334 (956)
Q Consensus 265 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 334 (956)
... .+..+..+..+++..|.++ .+-...... .|+.+++++|.+. ..+..+..+..+..|++.+|++.
T Consensus 200 ~i~-~~~~~~~l~~~~l~~n~i~-~~~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 200 EIE-GLDLLKKLVLLSLLDNKIS-KLEGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred ccc-chHHHHHHHHhhcccccce-eccCcccchhHHHHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 322 2233334444466666665 222111111 2556666666555 22244445555555555555554
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.91 E-value=6.2e-10 Score=136.46 Aligned_cols=248 Identities=22% Similarity=0.316 Sum_probs=112.9
Q ss_pred eeEEEeCCCC--ccccCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeec
Q 002178 84 LRELQLLNLN--LSGNLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQI 161 (956)
Q Consensus 84 ~~~L~L~~~~--l~~~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 161 (956)
+++|-+..+. +.......|..++.|++|||++|.=-+.+|..+++|-+|++|+|++..+. .+|..+.+|.+|.+|++
T Consensus 547 L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl 625 (889)
T KOG4658|consen 547 LRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNL 625 (889)
T ss_pred cceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheecc
Confidence 4444444443 22222223555666666666655444456666666666666666666665 55666666666666666
Q ss_pred ccccccCCCCccccccccCCeeecccCcCC--CCCccccCCCcccceecccccccCCCCCcccCCcchhh----hhcccC
Q 002178 162 DQNYISGSLPKSFANLNKTRHFHMNNNSIS--GQIPPELSRLPSLVHMLLDNNNLTGYLPPELSELPKLL----ILQLDN 235 (956)
Q Consensus 162 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~Ls~ 235 (956)
..+.-...+|.....+.+|++|.+..-... ...-..+.++.+|+.+....... .+-..+..+..|. .+.+.+
T Consensus 626 ~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~ 703 (889)
T KOG4658|consen 626 EVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEG 703 (889)
T ss_pred ccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcc
Confidence 655544344444555666666655443311 11122223333333333322221 1111222233333 222222
Q ss_pred CcCCCCCCcccccCCCCCcEEeccCCCCccCCCC-CCC------CCCccEEEccCCcCCcCCCCCCCccccCEEEccCCc
Q 002178 236 NNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-LSR------IPNLGYLDLSSNQLNGSIPPGRLSLNITTIKLSNNK 308 (956)
Q Consensus 236 N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-l~~------l~~L~~L~Ls~N~l~~~~p~~~~~~~L~~L~Ls~N~ 308 (956)
+... ..+..+..+.+|+.|.+.++.+...... ... ++++..+...++..-..+....+..+|+.|.+..+.
T Consensus 704 ~~~~--~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~f~~~L~~l~l~~~~ 781 (889)
T KOG4658|consen 704 CSKR--TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLLFAPHLTSLSLVSCR 781 (889)
T ss_pred cccc--eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhhccCcccEEEEeccc
Confidence 2222 3444556666666666666665432211 000 112222222222111111122344466666666666
Q ss_pred CCCCCchhcCCCCcCCeEecccccCCCc
Q 002178 309 LTGTIPSNFSGLPRLQRLFIANNSLSGS 336 (956)
Q Consensus 309 l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 336 (956)
....+......+..++.+-+..+.+.+.
T Consensus 782 ~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 782 LLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred ccccCCCHHHHhhhcccEEecccccccc
Confidence 5555555555555555555555555544
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.86 E-value=1e-07 Score=105.25 Aligned_cols=167 Identities=19% Similarity=0.254 Sum_probs=127.3
Q ss_pred CeEEEEEEe-CCCcEEEEEEecCCChhhHHHHHHHHHHHHhcCCCceeeeecccc----cCCcEEEEEecCCC-CCHHHH
Q 002178 637 YGKVYKGIL-PDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRLHHRNLVSLVGYCD----EEGEQMLVYEFMSN-GTLRDQ 710 (956)
Q Consensus 637 ~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~----~~~~~~LV~e~~~~-gsL~~~ 710 (956)
..+.||+.. .||..|++|+++.........-..-+++++++.|.|||+|.+++. .+..+++||+|+++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357899985 489999999996544333323344678999999999999999886 34578999999875 577775
Q ss_pred Hhhc-------------CCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCC
Q 002178 711 LSAK-------------SKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPV 777 (956)
Q Consensus 711 l~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~ 777 (956)
-... .....++...|.++.|+..||.++|+.| ..-+-|.+++|+++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 4321 1224678899999999999999999999 88899999999999999999998888766543
Q ss_pred CCCCCccccceecccccCCCcccccccccCCCCCcccchhHHHHHHHHHhCCC
Q 002178 778 PDIEGIVPAHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGMQ 830 (956)
Q Consensus 778 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDVwS~G~ll~elltg~~ 830 (956)
++. |-+.+ -++-|.-.||.+++.+.||..
T Consensus 446 d~~---------------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT---------------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC---------------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 220 11111 235688899999999999954
No 486
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.81 E-value=5.5e-08 Score=103.88 Aligned_cols=140 Identities=14% Similarity=0.133 Sum_probs=100.0
Q ss_pred eeeeeCCeEEEEEEeCCCcEEEEEEecCCChhh-H----------HHHHHHHHHHHhcCCCcee--eeeccccc-----C
Q 002178 631 QIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQG-E----------KEFLTEIQFLSRLHHRNLV--SLVGYCDE-----E 692 (956)
Q Consensus 631 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~----------~~~~~E~~~l~~l~h~nIv--~l~~~~~~-----~ 692 (956)
.+-......|++..+ +|+.|.||......... . ..+.+|.+.+.++...+|. +++++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 333333345667665 67889999775433211 1 1477899988888544333 34445432 2
Q ss_pred CcEEEEEecCCCC-CHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcC-------CCcE
Q 002178 693 GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDH-------KFTA 764 (956)
Q Consensus 693 ~~~~LV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~-------~~~~ 764 (956)
...+||||++++. +|.+++......+.+...+..++.+++..+.-||..| |+|+|++++|||++. ++.+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCceE
Confidence 3578999999875 8999985432334556677789999999999999999 999999999999975 4689
Q ss_pred EEEeeccccc
Q 002178 765 KVADFGLSRL 774 (956)
Q Consensus 765 kl~DfGla~~ 774 (956)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998753
No 487
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=3.5e-08 Score=99.30 Aligned_cols=126 Identities=25% Similarity=0.311 Sum_probs=83.3
Q ss_pred EEEEEEeCCCcEEEEEEecCCCh-------------h-------------hHHHHHHHHHHHHhcCCC--ceeeeecccc
Q 002178 639 KVYKGILPDGTVVAVKRAQEGSL-------------Q-------------GEKEFLTEIQFLSRLHHR--NLVSLVGYCD 690 (956)
Q Consensus 639 ~Vy~~~~~~~~~vavK~~~~~~~-------------~-------------~~~~~~~E~~~l~~l~h~--nIv~l~~~~~ 690 (956)
.||.|...+|..+|||+.+.... . ......+|++.|.++... ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 48999988999999997653110 0 123467899999999765 456666543
Q ss_pred cCCcEEEEEecCC--CCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHH-hhhcCCCCEeccCCCcccEEEcCCCcEEEE
Q 002178 691 EEGEQMLVYEFMS--NGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILY-LHTEADPPVFHRDIKASNILLDHKFTAKVA 767 (956)
Q Consensus 691 ~~~~~~LV~e~~~--~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~y-LH~~~~~~ivH~Dlk~~NILl~~~~~~kl~ 767 (956)
..++||||++ |..+..+.... ++......++.+++..+.. +|..| |+|+|+.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEE
Confidence 4579999998 55554433221 2234456677788775555 57888 9999999999999988 99999
Q ss_pred eeccccccC
Q 002178 768 DFGLSRLAP 776 (956)
Q Consensus 768 DfGla~~~~ 776 (956)
|||.+....
T Consensus 149 Df~qav~~~ 157 (188)
T PF01163_consen 149 DFGQAVDSS 157 (188)
T ss_dssp -GTTEEETT
T ss_pred ecCcceecC
Confidence 999887543
No 488
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.77 E-value=9.4e-11 Score=132.27 Aligned_cols=179 Identities=25% Similarity=0.326 Sum_probs=107.2
Q ss_pred CccccccccCCeeecccCcCCCCCccccCCC-cccceecccccccC----------CCCCcccCCcchhhhhcccCCcCC
Q 002178 171 PKSFANLNKTRHFHMNNNSISGQIPPELSRL-PSLVHMLLDNNNLT----------GYLPPELSELPKLLILQLDNNNFE 239 (956)
Q Consensus 171 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l-~~L~~L~L~~N~l~----------~~~p~~l~~l~~L~~L~Ls~N~l~ 239 (956)
|-.+..+.+|+.|.|.++.|+. . ..+..+ ..|++|-- .|.+. |.+.+++. ..+|...+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~-Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPV-WNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchh-hhhHhhhhcchhhHH
Confidence 5566777788888888887762 1 111111 12333321 12211 11111111 245777788888886
Q ss_pred CCCCcccccCCCCCcEEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCC-CCccccCEEEccCCcCCCCCchhcC
Q 002178 240 GTTIPASYSNMSKLLKLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPG-RLSLNITTIKLSNNKLTGTIPSNFS 318 (956)
Q Consensus 240 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~~~L~~L~Ls~N~l~~~~p~~~~ 318 (956)
.+..++.-++.|+.|+|++|+++... .+..++.|+.|||++|.|. .+|.. ...-.|+.|.|++|.++.. ..+.
T Consensus 178 --~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~tL--~gie 251 (1096)
T KOG1859|consen 178 --LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTTL--RGIE 251 (1096)
T ss_pred --hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHhh--hhHH
Confidence 46667777888888888888887655 6777888888888888887 55542 2222577777777766632 2344
Q ss_pred CCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCCCCCC---CCCCCcEEEecCCcccccC
Q 002178 319 GLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNISGSF---NIPPNVTVRLRGNPFCLNT 388 (956)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l~~~~---~~~~l~~l~l~~Np~~c~c 388 (956)
+|.+|+.|||++|-|.+ ...-. .+..+..|+|.|||.||.-
T Consensus 252 ~LksL~~LDlsyNll~~-----------------------------hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 252 NLKSLYGLDLSYNLLSE-----------------------------HSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred hhhhhhccchhHhhhhc-----------------------------chhhhHHHHHHHHHHHhhcCCccccCH
Confidence 56666666666666553 22211 2445577889999999863
No 489
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.63 E-value=1e-08 Score=117.22 Aligned_cols=184 Identities=19% Similarity=0.311 Sum_probs=121.7
Q ss_pred HHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccccCCCCCC--CccccceecccccCCCcccccccccC
Q 002178 730 GSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRLAPVPDIE--GIVPAHVSTVVKGTPGYLDPEYFLTH 807 (956)
Q Consensus 730 ~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~--~~~~~~~~~~~~gt~~y~aPE~~~~~ 807 (956)
+++.|+.|+|... .+||++|.|++|.++..+.+||+.|+.+.....+... ............-...|.|||++.+.
T Consensus 107 ~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~ 184 (700)
T KOG2137|consen 107 NVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT 184 (700)
T ss_pred cccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence 4458999999854 5999999999999999999999999988655431110 00011122223345689999999998
Q ss_pred CCCCcccchhHHHHHHHHHhCCCCCCCCchhHHHHHHHhhcccchhhccCCCCCCChHHHHHHHHHHHHhcccCCCCCCC
Q 002178 808 KLTDKSDVYSLGVVFLELLTGMQPISHGKNIVREVNIAYQSSMMFSVIDGNMGSYPSECVEKFIKLALKCCQDETDARPS 887 (956)
Q Consensus 808 ~~~~~sDVwS~G~ll~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c~~~~p~~RPs 887 (956)
..+.++|+||+||++|.+..|..+................ ..+-....+..+.+.++.+-+.+.+..++.-||+
T Consensus 185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~------~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~ 258 (700)
T KOG2137|consen 185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN------LLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT 258 (700)
T ss_pred cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc------ccccccccccccCcHHHHHHHHHHhcCCcccCcc
Confidence 8999999999999999999554444322211111111100 0111112234566778888888889999999997
Q ss_pred HHHHHHHHHHhHhhCCCCCCCCccccccccCCCCCCCCC
Q 002178 888 MSEVMRELESIWNMMPESDTKTPEFINSEHTSKEETPPS 926 (956)
Q Consensus 888 ~~~v~~~L~~~~~~~~~~~~~~~~ll~~~L~~dP~~R~s 926 (956)
+..+... ..+.+....++.|+..+.++||.+--+
T Consensus 259 ~~~l~~~-----~ff~D~~~~aLrfLD~l~~kdn~qKs~ 292 (700)
T KOG2137|consen 259 LDLLLSI-----PFFSDPGLKALRFLDDLPQKDNSQKSS 292 (700)
T ss_pred hhhhhcc-----cccCCchhhhhhhcccccccCcHHHHH
Confidence 7655432 233444555678888888888865543
No 490
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.63 E-value=2.1e-07 Score=95.88 Aligned_cols=137 Identities=22% Similarity=0.201 Sum_probs=97.2
Q ss_pred CCCCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCCh----------------------hhHHHHHHHHHHHHhcCCC--c
Q 002178 626 FNSSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSL----------------------QGEKEFLTEIQFLSRLHHR--N 681 (956)
Q Consensus 626 y~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~E~~~l~~l~h~--n 681 (956)
+.+.+.||-|.-+.||.|..+.|.++|||.=+.... -......+|+++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345678999999999999999999999995321110 1123457899999998754 5
Q ss_pred eeeeecccccCCcEEEEEecCCCCCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCC
Q 002178 682 LVSLVGYCDEEGEQMLVYEFMSNGTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHK 761 (956)
Q Consensus 682 Iv~l~~~~~~~~~~~LV~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~ 761 (956)
|.+.+++ +...+||||++|-.|...- ++....-.++..|++-+.-.-..| |||+|+.+-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence 5555544 4678999999886664432 112223334445555555455677 9999999999999999
Q ss_pred CcEEEEeeccccccC
Q 002178 762 FTAKVADFGLSRLAP 776 (956)
Q Consensus 762 ~~~kl~DfGla~~~~ 776 (956)
|.+.++||--+....
T Consensus 239 g~~~vIDwPQ~v~~~ 253 (304)
T COG0478 239 GDIVVIDWPQAVPIS 253 (304)
T ss_pred CCEEEEeCcccccCC
Confidence 999999998776543
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.62 E-value=1.4e-08 Score=82.46 Aligned_cols=59 Identities=32% Similarity=0.475 Sum_probs=27.3
Q ss_pred CCCEEEccCCCCcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceeeccccc
Q 002178 107 YLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNY 165 (956)
Q Consensus 107 ~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 165 (956)
+|++|+|++|+|+...+..|.++++|++|+|++|+++...|..|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444455444443333344444444444444444444444444444444444444443
No 492
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.61 E-value=4.3e-08 Score=120.49 Aligned_cols=271 Identities=22% Similarity=0.236 Sum_probs=176.0
Q ss_pred eeeEEEeCCCCccccCCcCcCCCCCCCEEEccCCC--CcccCCcccccCcccchhhccCcCCCCCCCCccCCCcccceee
Q 002178 83 HLRELQLLNLNLSGNLSPEIGRLSYLTILDFMWNK--ISGSIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQ 160 (956)
Q Consensus 83 ~~~~L~L~~~~l~~~~~~~l~~l~~L~~L~Ls~N~--l~~~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 160 (956)
.++...+-++.+... +... ..+.|++|-+.+|. +.......|..++.|++||||+|.=.+.+|..+++|-+|++|+
T Consensus 524 ~~rr~s~~~~~~~~~-~~~~-~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 524 SVRRMSLMNNKIEHI-AGSS-ENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred heeEEEEeccchhhc-cCCC-CCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 455566666555422 2222 22369999999996 5533344578899999999999987789999999999999999
Q ss_pred cccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccc--cCCCCCcccCCcchhhhhcccCCcC
Q 002178 161 IDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN--LTGYLPPELSELPKLLILQLDNNNF 238 (956)
Q Consensus 161 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~--l~~~~p~~l~~l~~L~~L~Ls~N~l 238 (956)
|++..++ .+|..+.+|.+|.+|++..+.-...+|.....+++|++|.|..-. .+...-..+..+.+|+.|.......
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 9999999 899999999999999999988766677778889999999987654 2333344555666666666543332
Q ss_pred CCCCCcccccCCCCCc----EEeccCCCCccCCCCCCCCCCccEEEccCCcCCcCCCCCCCcc-------ccCEEEccCC
Q 002178 239 EGTTIPASYSNMSKLL----KLSLRNCSLQGPMPDLSRIPNLGYLDLSSNQLNGSIPPGRLSL-------NITTIKLSNN 307 (956)
Q Consensus 239 ~~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~~-------~L~~L~Ls~N 307 (956)
.+-..+..+.+|. .+.+.++........+..+.+|+.|.+.++.+........... ++..+...++
T Consensus 681 ---~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~ 757 (889)
T KOG4658|consen 681 ---LLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNC 757 (889)
T ss_pred ---HhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhcc
Confidence 1112233333333 4444445555566678889999999999998863222211110 1111111111
Q ss_pred cCCCCCchhcCCCCcCCeEecccccCCCcCChhhhhhccCCCCcceEEEccCCCCCCC
Q 002178 308 KLTGTIPSNFSGLPRLQRLFIANNSLSGSIPSSIWQSRTLNATETFILDFQNNNLTNI 365 (956)
Q Consensus 308 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l~~~~L~~L~L~~N~L~~l 365 (956)
..- ..+....-.++|+.|++.+......+.+....+..+. .+-+..+.+..+
T Consensus 758 ~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~-----~~i~~f~~~~~l 809 (889)
T KOG4658|consen 758 HML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELK-----ELILPFNKLEGL 809 (889)
T ss_pred ccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcc-----cEEecccccccc
Confidence 111 1223334568999999998887766666555544433 244555555554
No 493
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.61 E-value=2e-08 Score=81.58 Aligned_cols=58 Identities=31% Similarity=0.537 Sum_probs=24.3
Q ss_pred cceeecccccccCCCCccccccccCCeeecccCcCCCCCccccCCCcccceecccccc
Q 002178 156 LDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPPELSRLPSLVHMLLDNNN 213 (956)
Q Consensus 156 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~ 213 (956)
|++|+|++|+|+...+..|.++++|++|++++|.++...+..|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4444444444443333344444444444444444443333344444444444444443
No 494
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.59 E-value=8.3e-09 Score=105.64 Aligned_cols=198 Identities=22% Similarity=0.237 Sum_probs=134.6
Q ss_pred eeEEEeCCCCccccCC-cCcC-CCCCCCEEEccCCCCcc--cCCcccccCcccchhhccCcCCCCCCCCccCCCccccee
Q 002178 84 LRELQLLNLNLSGNLS-PEIG-RLSYLTILDFMWNKISG--SIPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRI 159 (956)
Q Consensus 84 ~~~L~L~~~~l~~~~~-~~l~-~l~~L~~L~Ls~N~l~~--~ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 159 (956)
+..|.+.++.|...-. ..|+ ..++++.|||.+|.|+. .|-.-+.+++.|++|+|+.|++...|-..-..+.+|+.|
T Consensus 47 ~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~l 126 (418)
T KOG2982|consen 47 LELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVL 126 (418)
T ss_pred hhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEE
Confidence 4456677776654321 2233 35789999999999985 444456788999999999999985544433577899999
Q ss_pred ecccccccCC-CCccccccccCCeeecccCcCCCCC--ccc----------cCCCcccceecccccccCCCCCcccCCcc
Q 002178 160 QIDQNYISGS-LPKSFANLNKTRHFHMNNNSISGQI--PPE----------LSRLPSLVHMLLDNNNLTGYLPPELSELP 226 (956)
Q Consensus 160 ~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~--p~~----------l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 226 (956)
.|.+..+.-. ....+..++++++|+++.|.+.... .+. +..++.+..++++-|++.. -++
T Consensus 127 VLNgT~L~w~~~~s~l~~lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r-------~Fp 199 (418)
T KOG2982|consen 127 VLNGTGLSWTQSTSSLDDLPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSR-------IFP 199 (418)
T ss_pred EEcCCCCChhhhhhhhhcchhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHh-------hcc
Confidence 9999887633 3455678899999999998443111 111 1122334444444444442 246
Q ss_pred hhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCCccC--CCCCCCCCCccEEEccCCcCCc
Q 002178 227 KLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGP--MPDLSRIPNLGYLDLSSNQLNG 288 (956)
Q Consensus 227 ~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~l~~l~~L~~L~Ls~N~l~~ 288 (956)
++..+.+..|.+.....-..+..++.+..|.|+.|+|..- ...+..++.|..|.+++|.|..
T Consensus 200 nv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 200 NVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred cchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 7788888888887655556677778888888888888763 3357788888888888888763
No 495
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.55 E-value=3.2e-06 Score=91.23 Aligned_cols=259 Identities=16% Similarity=0.169 Sum_probs=159.8
Q ss_pred CCCeeeeeCCeEEEEEEeCCCcEEEEEEecCCChhhHHHHHHHHHHHHhc-CCCceeeeecc------cccCC-cEEEEE
Q 002178 628 SSTQIGQGGYGKVYKGILPDGTVVAVKRAQEGSLQGEKEFLTEIQFLSRL-HHRNLVSLVGY------CDEEG-EQMLVY 699 (956)
Q Consensus 628 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~l~~~------~~~~~-~~~LV~ 699 (956)
..+.||+|+-+.+|-.- +-+..+.|++.........+. +..|... .||-+-.=+.+ ..+.+ ...+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~aqk---~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQAQK---VAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHHHHH---HHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 35779999999998532 112234566665433333222 2233332 45533221111 11222 367888
Q ss_pred ecCCCC-CHHHHHh----hcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCcEEEEeeccccc
Q 002178 700 EFMSNG-TLRDQLS----AKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFTAKVADFGLSRL 774 (956)
Q Consensus 700 e~~~~g-sL~~~l~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~~kl~DfGla~~ 774 (956)
+.+.+. .+.+++. ++.-....|...++.++.+|.+-+-||..| .+-+|+.++|+|+.+++.|.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 887654 2222322 123345889999999999999999999999 89999999999999999999987554332
Q ss_pred cCCCCCCCccccceecccccCCCcccccccc-----cCCCCCcccchhHHHHHHHHHhC-CCCCCCCch---hHHHHHHH
Q 002178 775 APVPDIEGIVPAHVSTVVKGTPGYLDPEYFL-----THKLTDKSDVYSLGVVFLELLTG-MQPISHGKN---IVREVNIA 845 (956)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDVwS~G~ll~elltg-~~pf~~~~~---~~~~~~~~ 845 (956)
.. .........|...|.+||... +..-+...|-|.+|+++++++.| ++||..... ........
T Consensus 167 ~~--------ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 167 NA--------NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred cc--------CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 21 122334556888999999865 34456789999999999999986 999964210 00000000
Q ss_pred hhcccchhhccCCCC------CCC-hHHHHHHHHHHHHhcccC--CCCCCCHHHHHHHHHHhHhhC
Q 002178 846 YQSSMMFSVIDGNMG------SYP-SECVEKFIKLALKCCQDE--TDARPSMSEVMRELESIWNMM 902 (956)
Q Consensus 846 ~~~~~~~~~~~~~~~------~~~-~~~~~~l~~l~~~c~~~~--p~~RPs~~~v~~~L~~~~~~~ 902 (956)
.....+....+...+ ..| .-.+..+..+..+|+... +.-||+.+..+..|......+
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L 304 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQL 304 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhh
Confidence 111111111111111 112 233467788888888764 568999999998888776544
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.51 E-value=4.8e-09 Score=118.81 Aligned_cols=125 Identities=24% Similarity=0.323 Sum_probs=55.7
Q ss_pred cchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCccccccccCCeeecccCcCCCCCcc-ccCCCcccceeccc
Q 002178 132 LELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANLNKTRHFHMNNNSISGQIPP-ELSRLPSLVHMLLD 210 (956)
Q Consensus 132 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~L~ 210 (956)
|.+.+.+.|.+. .+..++.-++.|+.|+|++|+++... .+..+++|+.|||+.|++. .+|. ....+ .|..|.|+
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lr 240 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLR 240 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhh-hheeeeec
Confidence 444444555544 44444444455555555555554221 4444555555555555554 2222 11122 25555555
Q ss_pred ccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCCcEEeccCCCC
Q 002178 211 NNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKLLKLSLRNCSL 263 (956)
Q Consensus 211 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l 263 (956)
+|.++.. ..+.+|.+|+.|||++|-|.+..--..+..+..|+.|+|.+|.+
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 5554422 22344445555555555544322222333444445555555544
No 497
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.46 E-value=1.8e-08 Score=101.88 Aligned_cols=233 Identities=21% Similarity=0.250 Sum_probs=137.2
Q ss_pred cCCCCCCCEEEccCCCCccc----CCcccccCcccchhhccCcCCCCCCCCccCCCcccceeecccccccCCCCcccccc
Q 002178 102 IGRLSYLTILDFMWNKISGS----IPKEIGNIKSLELLLLNGNELTGSLPEELGYLPKLDRIQIDQNYISGSLPKSFANL 177 (956)
Q Consensus 102 l~~l~~L~~L~Ls~N~l~~~----ip~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 177 (956)
+..+..++.+|||+|.|... +...+.+-++|++.++|+-- +|..-+.+- .+|+ .+-.++..+
T Consensus 26 l~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~f-tgr~kde~~--~~L~-----------~Ll~aLlkc 91 (388)
T COG5238 26 LEMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAF-TGRDKDELY--SNLV-----------MLLKALLKC 91 (388)
T ss_pred HHhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhh-hcccHHHHH--HHHH-----------HHHHHHhcC
Confidence 44467778888888877643 22334444666666665532 222111100 0000 112344556
Q ss_pred ccCCeeecccCcCCCCCccc----cCCCcccceecccccccCCCCCcccCCcchhhhhcccCCcCCCCCCcccccCCCCC
Q 002178 178 NKTRHFHMNNNSISGQIPPE----LSRLPSLVHMLLDNNNLTGYLPPELSELPKLLILQLDNNNFEGTTIPASYSNMSKL 253 (956)
Q Consensus 178 ~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~p~~~~~l~~L 253 (956)
++|+..+||+|.|....|.. +++-+.|++|.|++|.+...--.-++ ..|.+| ..|+ ...+-+.|
T Consensus 92 p~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rig--kal~~l--a~nK--------Kaa~kp~L 159 (388)
T COG5238 92 PRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIG--KALFHL--AYNK--------KAADKPKL 159 (388)
T ss_pred CcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHH--HHHHHH--HHHh--------hhccCCCc
Confidence 66666666666666555443 45567788888888877622212222 122222 2222 12344678
Q ss_pred cEEeccCCCCccCCCC-----CCCCCCccEEEccCCcCCcCCCCCC---------CccccCEEEccCCcCCCC----Cch
Q 002178 254 LKLSLRNCSLQGPMPD-----LSRIPNLGYLDLSSNQLNGSIPPGR---------LSLNITTIKLSNNKLTGT----IPS 315 (956)
Q Consensus 254 ~~L~Ls~N~l~~~~~~-----l~~l~~L~~L~Ls~N~l~~~~p~~~---------~~~~L~~L~Ls~N~l~~~----~p~ 315 (956)
+.++...|++..-+.. +....+|+.+.+.+|.|. |.+. ...+|+.|||++|-++-. ...
T Consensus 160 e~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIr---pegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~ 236 (388)
T COG5238 160 EVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIR---PEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLAD 236 (388)
T ss_pred eEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcC---cchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHH
Confidence 8888888888654332 445578888899888876 4322 223799999999988643 345
Q ss_pred hcCCCCcCCeEecccccCCCcCChhhh-hhccCCCCcceEEEccCCCCC
Q 002178 316 NFSGLPRLQRLFIANNSLSGSIPSSIW-QSRTLNATETFILDFQNNNLT 363 (956)
Q Consensus 316 ~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~l~~~~L~~L~L~~N~L~ 363 (956)
.+..++.|+.|.+.++-++..-..++. .......+.|+.|-+.+|...
T Consensus 237 al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~ 285 (388)
T COG5238 237 ALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERR 285 (388)
T ss_pred HhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhc
Confidence 677888999999999999877665543 334445566667777777654
No 498
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=2.3e-06 Score=86.58 Aligned_cols=137 Identities=19% Similarity=0.185 Sum_probs=103.5
Q ss_pred eeeCCeEEEEEEeCCCcEEEEEEecCC---C---hhhHHHHHHHHHHHHhcCCCc--eeeeecccc-c----CCcEEEEE
Q 002178 633 GQGGYGKVYKGILPDGTVVAVKRAQEG---S---LQGEKEFLTEIQFLSRLHHRN--LVSLVGYCD-E----EGEQMLVY 699 (956)
Q Consensus 633 G~G~~g~Vy~~~~~~~~~vavK~~~~~---~---~~~~~~~~~E~~~l~~l~h~n--Iv~l~~~~~-~----~~~~~LV~ 699 (956)
|+||-+.|++-... |..+-+|.-... + ..++..|.+|+..+.++...+ +.++. ++. . .-.-+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 67888889987764 446888865421 1 335678999999999986333 44444 332 1 12468999
Q ss_pred ecCCC-CCHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHhhhcCCCCEeccCCCcccEEEcCCCc--EEEEeeccccc
Q 002178 700 EFMSN-GTLRDQLSAKSKEPLGFAMRLSIALGSSRGILYLHTEADPPVFHRDIKASNILLDHKFT--AKVADFGLSRL 774 (956)
Q Consensus 700 e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH~Dlk~~NILl~~~~~--~kl~DfGla~~ 774 (956)
|-+++ .||.+++......+.+...+..+..++++.+.-||+.+ +.|+|+.+.||+++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 97743 68999987655556778888899999999999999999 999999999999986666 99999987654
No 499
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.41 E-value=4.1e-08 Score=100.68 Aligned_cols=201 Identities=19% Similarity=0.258 Sum_probs=139.7
Q ss_pred ceeeEEEeCCCCccc--cCCcCcCCCCCCCEEEccCCCCcccCCcccccCcccchhhccCcCCCC-CCCCccCCCcccce
Q 002178 82 LHLRELQLLNLNLSG--NLSPEIGRLSYLTILDFMWNKISGSIPKEIGNIKSLELLLLNGNELTG-SLPEELGYLPKLDR 158 (956)
Q Consensus 82 ~~~~~L~L~~~~l~~--~~~~~l~~l~~L~~L~Ls~N~l~~~ip~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~ 158 (956)
.+|+++||.+|.|+. .+-.-+.+|++|+.|+|+.|.+...|-..--.+++|++|-|.+..+.- .....+..++.++.
T Consensus 71 ~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~vte 150 (418)
T KOG2982|consen 71 TDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKVTE 150 (418)
T ss_pred hhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhhhh
Confidence 578999999999885 344557899999999999999986554322467899999999888762 34455778899999
Q ss_pred eecccccccCCC--Ccccccc-ccCCeeecccCcCCC--CCccccCCCcccceecccccccCCCC-CcccCCcchhhhhc
Q 002178 159 IQIDQNYISGSL--PKSFANL-NKTRHFHMNNNSISG--QIPPELSRLPSLVHMLLDNNNLTGYL-PPELSELPKLLILQ 232 (956)
Q Consensus 159 L~Ls~N~l~~~~--p~~~~~l-~~L~~L~L~~N~l~~--~~p~~l~~l~~L~~L~L~~N~l~~~~-p~~l~~l~~L~~L~ 232 (956)
|.+|.|++.... .+..... +.+++|++..|.... .+-..-.-+|++..+.+..|.|.... .+.+..++.+..|+
T Consensus 151 lHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~Ln 230 (418)
T KOG2982|consen 151 LHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSCLN 230 (418)
T ss_pred hhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchhhh
Confidence 999999654221 1111111 234444444332210 00001123568888889999887433 34567788888999
Q ss_pred ccCCcCCCCCCcccccCCCCCcEEeccCCCCccCCCC-------CCCCCCccEEEcc
Q 002178 233 LDNNNFEGTTIPASYSNMSKLLKLSLRNCSLQGPMPD-------LSRIPNLGYLDLS 282 (956)
Q Consensus 233 Ls~N~l~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-------l~~l~~L~~L~Ls 282 (956)
|+.|+|.....-+.+.++++|..|.+++|.|...... ++.+++++.|+=|
T Consensus 231 L~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL~~v~vLNGs 287 (418)
T KOG2982|consen 231 LGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARLTKVQVLNGS 287 (418)
T ss_pred hcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeeccceEEecCc
Confidence 9999998766667899999999999999998765442 5677888877654
No 500
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.39 E-value=1.4e-06 Score=90.02 Aligned_cols=107 Identities=25% Similarity=0.299 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHhcCCCc--eeeeecccccC----CcEEEEEecCCCC-CHHHHHhhcCCCCchhHHHHHHHHHHHHHHH
Q 002178 664 EKEFLTEIQFLSRLHHRN--LVSLVGYCDEE----GEQMLVYEFMSNG-TLRDQLSAKSKEPLGFAMRLSIALGSSRGIL 736 (956)
Q Consensus 664 ~~~~~~E~~~l~~l~h~n--Iv~l~~~~~~~----~~~~LV~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~gL~ 736 (956)
.....+|.+.+.++.... +.+.+++.... ...++|+|++++. +|.+++..... .+......++.++++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALARLIA 132 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHHHHHH
Confidence 346788888887775333 34555555432 2458999999874 89999876332 556667889999999999
Q ss_pred HhhhcCCCCEeccCCCcccEEEcCCC---cEEEEeecccccc
Q 002178 737 YLHTEADPPVFHRDIKASNILLDHKF---TAKVADFGLSRLA 775 (956)
Q Consensus 737 yLH~~~~~~ivH~Dlk~~NILl~~~~---~~kl~DfGla~~~ 775 (956)
-||+.| |+|+|+++.|||++.+. .+.++||+-++..
T Consensus 133 ~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 133 KLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 999999 99999999999999887 8999999987653
Done!