Your job contains 1 sequence.
>002180
MGLDARTFASCNNIPQYRKRNISMNAYSLSCEISSENGDSLPVLCSPDYYTEPLLNDLGK
REVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIVKFGRHEIVVYEDESSKPE
VGQGLNKAAEVTLFLQGRYLSLKLKEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFL
VVHFSRFGLSDDEEDDIMMDDATPVQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHL
GLDPIKMKEMRMVMFQEEEEIDDFSGTPSRQQWSLGKEYIRPPLQNTAQRMSQRSSSPLA
RKTPVGLLEYHPGNSDSDSPGMILMAQQNKGMPLKKLKSDGFKLDLKHETPVTGSHSHNI
VDAGLFMGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINVEKVAIDKVVRDENDKVRK
ELVDFSFDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNSLMLSEICRSYIDIIEAQLDV
PGVSSSTRLVLMHQVMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEA
LPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVR
LACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLNDVTID
WKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKAPLPVPIYVDEGPIDEPIDWSGNERN
DLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVGVISSNDLQIL
DMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSEESQRKFIE
ALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDV
WTLATSMESHKSEIENWDLGAGMYIVFYLIRSSLQEENNTMSDLVRIKKTQHCEI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 002180
(955 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2025737 - symbol:SAR3 "SUPPRESSOR OF AUXIN RES... 3065 0. 1
UNIPROTKB|E1BYU8 - symbol:NUP98 "Uncharacterized protein"... 532 2.4e-67 3
UNIPROTKB|P52948 - symbol:NUP98 "Nuclear pore complex pro... 499 5.2e-66 3
UNIPROTKB|E1BCV4 - symbol:NUP98 "Uncharacterized protein"... 505 1.4e-65 2
ZFIN|ZDB-GENE-040426-1180 - symbol:nup98 "nucleoporin 98"... 489 2.7e-65 2
UNIPROTKB|E2R4V6 - symbol:NUP98 "Uncharacterized protein"... 500 3.8e-65 2
UNIPROTKB|F1SUZ2 - symbol:NUP98 "Uncharacterized protein"... 502 1.7e-64 2
RGD|71033 - symbol:Nup98 "nucleoporin 98" species:10116 "... 486 1.1e-63 2
UNIPROTKB|J3KP29 - symbol:NUP98 "Nuclear pore complex pro... 301 5.2e-51 4
DICTYBASE|DDB_G0291390 - symbol:nup98 "putative nucleopor... 366 1.7e-47 4
FB|FBgn0039120 - symbol:Nup98-96 "Nucleoporin 98-96kD" sp... 304 1.8e-44 3
TAIR|locus:2012788 - symbol:AT1G10390 "AT1G10390" species... 396 4.9e-33 1
TAIR|locus:2202887 - symbol:AT1G59660 "AT1G59660" species... 361 2.8e-29 1
WB|WBGene00003796 - symbol:npp-10 species:6239 "Caenorhab... 210 5.0e-28 5
UNIPROTKB|G5EEH9 - symbol:npp-10 "Nuclear pore complex pr... 210 5.0e-28 5
POMBASE|SPAC1486.05 - symbol:nup189 "nucleoporin Nup98 an... 231 2.7e-27 2
ASPGD|ASPL0000029682 - symbol:sonB species:162425 "Emeric... 154 2.7e-23 5
UNIPROTKB|G4MSW8 - symbol:MGG_04617 "Uncharacterized prot... 184 4.8e-22 3
SGD|S000003060 - symbol:NUP145 "Essential protein with di... 141 4.1e-15 4
CGD|CAL0005513 - symbol:orf19.7433 species:5476 "Candida ... 161 1.2e-07 1
SGD|S000001551 - symbol:NUP100 "FG-nucleoporin component ... 144 6.9e-06 1
SGD|S000004650 - symbol:NUP116 "FG-nucleoporin component ... 133 0.00013 1
>TAIR|locus:2025737 [details] [associations]
symbol:SAR3 "SUPPRESSOR OF AUXIN RESISTANCE 3"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0009910
"negative regulation of flower development" evidence=NAS]
[GO:0009870 "defense response signaling pathway, resistance
gene-dependent" evidence=IMP] [GO:0015288 "porin activity"
evidence=ISS] [GO:0006406 "mRNA export from nucleus"
evidence=IGI;RCA] [GO:0009733 "response to auxin stimulus"
evidence=IGI] [GO:0031965 "nuclear membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] [GO:0009909 "regulation of
flower development" evidence=RCA] [GO:0010074 "maintenance of
meristem identity" evidence=RCA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 EMBL:CP002684 GO:GO:0009733 GO:GO:0031965
GO:GO:0005643 GO:GO:0009870 GO:GO:0006406 GO:GO:0015288
SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967 Pfam:PF12110
HSSP:Q9Y6J4 EMBL:AF411839 EMBL:AY942798 IPI:IPI00533825
RefSeq:NP_178183.2 UniGene:At.21888 ProteinModelPortal:Q8LLD0
SMR:Q8LLD0 STRING:Q8LLD0 MEROPS:S59.A01 PRIDE:Q8LLD0
EnsemblPlants:AT1G80680.1 GeneID:844407 KEGG:ath:AT1G80680
TAIR:At1g80680 HOGENOM:HOG000239775 InParanoid:Q8LLD0 OMA:PLDYHMI
PhylomeDB:Q8LLD0 ProtClustDB:CLSN2680671 Genevestigator:Q8LLD0
Uniprot:Q8LLD0
Length = 1046
Score = 3065 (1084.0 bits), Expect = 0., P = 0.
Identities = 585/940 (62%), Positives = 735/940 (78%)
Query: 18 RKRNISMNAYSLSCEISSENGDSLPVLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTV 77
+KR IS++ + CE S E DSLP+L SPDY+ +P +N+L +RE+ P Y SRVPDFT+
Sbjct: 23 KKRRISLDGIAALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYCSRVPDFTI 82
Query: 78 GRLGYGYVKFLGNTDVRWLDLDQIVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQG 137
GR+GYGY++FLGNTDVR LDLD IVKF RHE++VY+DESSKP VG+GLNKAAEVTL +
Sbjct: 83 GRIGYGYIRFLGNTDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAAEVTLVVN- 141
Query: 138 RYLSLKLKEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLSXXXXXXX 197
L + + K+K+ TERQGA F+SFDP +G WKF V HFSRFGLS
Sbjct: 142 -IPDLTWGKQQVNHIAYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFGLSDDEAEDI 200
Query: 198 XXXXATPVQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMF-- 255
A + + + ++G +V+D+DEE QM+ S ELSHSLPAHLGLDP KMKEMRM+MF
Sbjct: 201 AMDDAPGLGDPVGLDGKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMKEMRMLMFPN 260
Query: 256 QEEEEIDDFSGTPSRQQWSLGKEYIRPPLQNTAQRMSQRSSSPLARKTPVGLLEYHPGNS 315
++E+E +DF S SL K +RP Q AQR S + P+ RKTP+ LLEY+PGN
Sbjct: 261 EDEDESEDFREQTSHLMTSLTKRNVRPS-QKIAQRNSHQDPPPVVRKTPLALLEYNPGN- 318
Query: 316 DSDSPGMILMAQQNKGMPLKKLKSDGFKLDLKHETPVTGSHSHNIVDAGLFMGRAFRVGW 375
D SPG ILM QQNK + ++K K+ GF+LD+ H TP+T ++S N+VDA LFMGR+FR GW
Sbjct: 319 DKSSPGSILMVQQNKNLAVRKSKTGGFELDISHVTPLTDNYSRNVVDAALFMGRSFRAGW 378
Query: 376 GPNGILVHSGAPV-GSNSRGVISSVINVEKVAIDKVVRDENDKVRKELVDFSFDAPLNLH 434
GPNG+L H+G P+ S+S+ V+SSVIN EK+AIDKVV D KV+KEL+D +F+APL+LH
Sbjct: 379 GPNGVLFHTGKPICSSSSQMVLSSVINKEKIAIDKVVWDRKGKVQKELIDSAFEAPLSLH 438
Query: 435 KELNHETEEVEVGSYKLKLQKVVSNSLMLSEICRSYIDIIEAQLDVPGVSSSTRLVLMHQ 494
KELNH EEV GS+ LKLQ VV++ ++LS+ICRSYI IIE QL+V G+S+S +L LMHQ
Sbjct: 439 KELNHVEEEVRFGSFSLKLQNVVTDRVVLSDICRSYIGIIEKQLEVAGLSTSAKLFLMHQ 498
Query: 495 VMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLK 554
VMVWELIKVLFSER++ +L DNEE++MQD+K+ + D EALPLIRRAEFSCWL+
Sbjct: 499 VMVWELIKVLFSERQSTERLMYAASDNEEDVMQDVKEDSAKIDTEALPLIRRAEFSCWLQ 558
Query: 555 ESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVS 614
ESV HRVQEDVS L+ S+YL+H+F LLTGR+LDS+VELA S+GDVRLACLLSQAGGSTV+
Sbjct: 559 ESVSHRVQEDVSDLNGSSYLEHLFFLLTGRELDSAVELAISKGDVRLACLLSQAGGSTVN 618
Query: 615 RSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLNDVTIDWKRFLGLLMWYQLP 674
R+DI QL LWR NGLDF FIEK+RI+LYELLAG+IH +L D TIDWKRFLGLLMW+ LP
Sbjct: 619 RNDILQQLHLWRRNGLDFNFIEKERIKLYELLAGNIHDALQDFTIDWKRFLGLLMWHHLP 678
Query: 675 PETSLAIVFQTYQHLLDDGKAPLPVPIYVDEGPIDEPIDWSGNERNDLSYYLMLLHASGE 734
P++SL I+F++YQ LL+ KAP PVPIY+DEGP D + S N+ +D+ YYLMLLH+ E
Sbjct: 679 PDSSLPIIFRSYQLLLNQAKAPWPVPIYIDEGPADGFV--SDNKHSDILYYLMLLHSKEE 736
Query: 735 SKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVGVISSNDLQILDMGLVSQLLCQGKC 794
+FG L+TMF+A SST DPLDYHMIWH R +L AVG +S+DL LDMG V+QLL QG C
Sbjct: 737 EEFGFLQTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLHTLDMGFVAQLLSQGLC 796
Query: 795 HWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSEESQRKFIEALGVPSEWLHEAMA 854
HWAIYVVLH+P +D+PYL T+IREILFQYCE+WSS ESQR+FI+ LG+PSEW+HEA+A
Sbjct: 797 HWAIYVVLHIPFREDHPYLHVTVIREILFQYCETWSSMESQRQFIKDLGIPSEWMHEALA 856
Query: 855 VYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDVWTLATSMESHKSEI 914
VYYNY+G+ KAL+ F+ECANWQ+AHSIF+TSVAH+LFLSANHS++W +ATSM+ KSEI
Sbjct: 857 VYYNYHGDFVKALDQFIECANWQRAHSIFMTSVAHSLFLSANHSEIWRIATSMDDRKSEI 916
Query: 915 ENWDLGAGMYIVFYLIRSSLQEENNTMSDLVRIKKT-QHC 953
ENWDLGAG+Y+ FYL++SSLQE+ +TM +L + T + C
Sbjct: 917 ENWDLGAGIYMSFYLLKSSLQEDADTMVELEPLDSTNESC 956
>UNIPROTKB|E1BYU8 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0000776 GO:GO:0006260
GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
OMA:VNRDSED EMBL:AADN02055214 EMBL:AADN02055215 EMBL:AADN02055216
EMBL:AADN02055217 EMBL:AADN02055218 EMBL:AADN02055219
EMBL:AADN02055220 EMBL:AADN02055221 EMBL:AADN02055222
IPI:IPI00586977 Ensembl:ENSGALT00000022062 Uniprot:E1BYU8
Length = 1731
Score = 532 (192.3 bits), Expect = 2.4e-67, Sum P(3) = 2.4e-67
Identities = 171/610 (28%), Positives = 293/610 (48%)
Query: 349 ETPVTGSHSHNIVDAGLFMGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINVEKVAI- 407
E +T ++D LFMGRAFRVGWGPN LV+ G + S S G+ +
Sbjct: 1121 ENSITYQKGKLLMDMALFMGRAFRVGWGPNWTLVNCGDQL-SGSSGMEDLQCETAEYGFL 1179
Query: 408 -----DKVVRDENDKVRKELVDFSFDAPLNLHKELNHETEEVEVGSYKLKLQK---VVSN 459
K++ + KV E ++ +N K+L E+++ + + + +++
Sbjct: 1180 PTPVAPKLLPESPFKVHVEKLNLE-QRKMNRDKQLYLIPLEIKLKHSTVHMDEQCPLLAP 1238
Query: 460 SLMLSEICRSYIDIIEAQLDVPGVSSSTRLVLMHQVMVWELIKVLFSERENGGQLRSEGD 519
+ ++ I Y D + + P V + V+ H + W L + ++ G L+
Sbjct: 1239 NPGVAAI-HDYADWVRTASEDPAVMET---VVKHWCLTWTLCEAIW------GNLK---- 1284
Query: 520 DNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFL 579
E+ +++ P E+ L L RR FS WL E+ R+ E+V+ N+++ +F
Sbjct: 1285 ----ELEASLEE-PSEY---VLALERRRAFSRWLSETAAARIDEEVALTQHHNHVEAVFS 1336
Query: 580 LLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDR 639
LTGR++ + LA G+ RLA LLSQ GS +R + QL W D FI ++R
Sbjct: 1337 CLTGRRIGEACRLAQQAGNHRLALLLSQLVGSQPTRDLLTMQLVDWHRLQADC-FIPEER 1395
Query: 640 IRLYELLAGHIHSSLND-VTI------DWKRFLGLLMWYQLPPETS----LAIVFQTYQH 688
+R++ LLAG L++ ++I DWKR + + +WY LPP S LA+ +Q
Sbjct: 1396 LRIFALLAGKPVWQLSERISINVCSQLDWKRCMAIHLWYLLPPTASISQALAMYEAAFQT 1455
Query: 689 LLDDGK-APLPVPIYVD-EGPIDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNA 746
+ K A P+P Y++ G + E D +G D+ ++L+ L++ + L + +
Sbjct: 1456 TSESEKYACCPLPPYLEGSGCVIEEDDNAGRPLRDVCFHLLKLYSD---RHYDLDQLLDP 1512
Query: 747 LSSTYDPLDYHMIWHQREVLAAVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIYVVLHM 804
S T DP DY + WH EVL A+ + +L+ +QL +G WA++VVLH
Sbjct: 1513 RSITSDPADYRLSWHLWEVLRALNYSHLCRQGQGVLNASYAAQLESEGLWEWAVFVVLHE 1572
Query: 805 PRCDDYPYLQATLIREILFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYG 861
P D + ++ +RE+L ++C + ES K F+ + L VP+EW+HEA AV G
Sbjct: 1573 P--DTH--IREKAVRELLGRHCALCETPESWAKETFLTQRLCVPAEWIHEAKAVRARMEG 1628
Query: 862 ELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENWDL 919
+ K + +W + H + V +A ++ N+ + + + I++W+L
Sbjct: 1629 DKHKEALFLFKAGHWNECHKLVVRHLASDAIINENYKYLKGFLEDLSPPERSALIQDWEL 1688
Query: 920 GAGMYIVFYL 929
AG+ + Y+
Sbjct: 1689 -AGLVYLDYI 1697
Score = 247 (92.0 bits), Expect = 2.4e-67, Sum P(3) = 2.4e-67
Identities = 61/155 (39%), Positives = 87/155 (56%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
VL YYT P + +L + + V DFT+GR GYG + F G ++ L+LD IV
Sbjct: 737 VLTRAGYYTIPSMEELAR--FTNDRNECIVTDFTIGRKGYGSIFFEGEVNLTNLNLDDIV 794
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEG--DSDDFVKKM--KE 158
R E++VY D+ KP +G+GLN+ AEVTL G + + K G S + + +M +
Sbjct: 795 HIRRKEVIVYPDDERKPPIGEGLNRRAEVTL--DGVWPTDKTSRGLIKSPERLAEMNYEG 852
Query: 159 RTE----RQGARFVSFDPVSGEWKFLVVHFSRFGL 189
R E +QGARF + P +G W F V HFS++GL
Sbjct: 853 RLESVSRKQGARFKEYRPETGSWVFKVAHFSKYGL 887
Score = 44 (20.5 bits), Expect = 2.4e-67, Sum P(3) = 2.4e-67
Identities = 24/86 (27%), Positives = 43/86 (50%)
Query: 230 PELSHSLPAHLGLDPIKMKEMRMVMFQEEEEIDDFSGTPSRQQWSLGKEYIRPPLQNTAQ 289
P +H + + LG++P ++ M+ + +E+++D S GK+ PP +T+Q
Sbjct: 977 PASAH-IASTLGINPHVLQIMKASLLADEDDLDLILDHHS------GKQ---PPKMDTSQ 1026
Query: 290 RM-SQR---SSSPLARKTPV--GLLE 309
+ S R S S +K V GLL+
Sbjct: 1027 EICSPRLPISKSQGQKKCSVIAGLLQ 1052
>UNIPROTKB|P52948 [details] [associations]
symbol:NUP98 "Nuclear pore complex protein Nup98-Nup96"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0042277 "peptide
binding" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IDA;NAS]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0031080 "nuclear
pore outer ring" evidence=NAS;IDA] [GO:0006999 "nuclear pore
organization" evidence=NAS] [GO:0000059 "protein import into
nucleus, docking" evidence=NAS] [GO:0006913 "nucleocytoplasmic
transport" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;NAS] [GO:0006260 "DNA replication" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IDA;TAS] [GO:0000776
"kinetochore" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0042405 "nuclear inclusion body" evidence=IDA]
[GO:0044615 "nuclear pore nuclear basket" evidence=IDA] [GO:0051292
"nuclear pore complex assembly" evidence=IMP] [GO:0005215
"transporter activity" evidence=TAS] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0008645 "hexose
transport" evidence=TAS] [GO:0010827 "regulation of glucose
transport" evidence=TAS] [GO:0015758 "glucose transport"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0019221 "cytokine-mediated signaling pathway" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0044281
GO:GO:0005975 GO:GO:0006260 GO:GO:0031965 GO:GO:0019221
GO:GO:0015758 GO:GO:0010827 GO:GO:0055085 GO:GO:0005215
GO:GO:0042277 eggNOG:NOG12793 GO:GO:0051028 GO:GO:0000236
GO:GO:0031080 GO:GO:0006999 GO:GO:0000059 GO:GO:0017056
EMBL:AC060812 SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967
Pfam:PF12110 EMBL:U41815 EMBL:AB040538 EMBL:AF071076 EMBL:AF071077
EMBL:AF231130 EMBL:AC090587 EMBL:BC041136 EMBL:BC012906
EMBL:AF116074 EMBL:BT007349 EMBL:AL133601 EMBL:AL137613
IPI:IPI00006038 IPI:IPI00216688 IPI:IPI00337395 IPI:IPI00337397
IPI:IPI00936708 IPI:IPI00953181 PIR:T43443 RefSeq:NP_005378.4
RefSeq:NP_057404.2 RefSeq:NP_624357.1 RefSeq:NP_624358.2
UniGene:Hs.524750 PDB:1KO6 PDB:2Q5X PDB:2Q5Y PDB:3MMY PDBsum:1KO6
PDBsum:2Q5X PDBsum:2Q5Y PDBsum:3MMY ProteinModelPortal:P52948
SMR:P52948 DIP:DIP-32484N IntAct:P52948 MINT:MINT-121544
STRING:P52948 MEROPS:S59.001 PhosphoSite:P52948 DMDM:308153660
PaxDb:P52948 PRIDE:P52948 DNASU:4928 Ensembl:ENST00000324932
Ensembl:ENST00000355260 Ensembl:ENST00000397004
Ensembl:ENST00000397007 GeneID:4928 KEGG:hsa:4928 UCSC:uc001lyh.3
UCSC:uc001lyi.3 UCSC:uc001lyj.2 UCSC:uc001lyk.2 CTD:4928
GeneCards:GC11M003696 HGNC:HGNC:8068 MIM:601021 neXtProt:NX_P52948
PharmGKB:PA31856 HOVERGEN:HBG052702 OMA:VNRDSED ChiTaRS:NUP98
EvolutionaryTrace:P52948 GenomeRNAi:4928 NextBio:18979
PMAP-CutDB:P52948 ArrayExpress:P52948 Bgee:P52948
Genevestigator:P52948 GermOnline:ENSG00000110713 Uniprot:P52948
Length = 1817
Score = 499 (180.7 bits), Expect = 5.2e-66, Sum P(3) = 5.2e-66
Identities = 196/702 (27%), Positives = 327/702 (46%)
Query: 302 KTP--VGLLEYHPGNSDSDSPGMILMAQQNKGMPLKKLKSDGFKLDL---KHETPVTGSH 356
+TP L+ +S S P + + P LK+ G + L E VT
Sbjct: 1069 RTPRAASLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLKTVGTRRQLGLVPREKSVTYGK 1128
Query: 357 SHNIVDAGLFMGRAFRVGWGPNGILVHSGAPV-GSNSR-----------GVISSVINVEK 404
++D LFMGR+FRVGWGPN L +SG + GS+ G + + + V+
Sbjct: 1129 GKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKP 1188
Query: 405 VAID--KVVRDEND-KVRKELVDFS-FDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNS 460
+ KV ++ + RK D + PL L +L H T V+ +L ++ +
Sbjct: 1189 LTESPFKVHLEKLSLRQRKPDEDMKLYQTPLEL--KLKHSTVHVD------ELCPLIVPN 1240
Query: 461 LMLSEICRSYIDII-EAQLDVPGVSSSTRLVLMHQVMVWELIKVLFSERENGGQLRSEGD 519
L ++ I Y D + EA D+P ++ H + W L + L+ G L+ E D
Sbjct: 1241 LGVAVI-HDYADWVKEASGDLPEAQ-----IVKHWSLTWTLCEALW------GHLK-ELD 1287
Query: 520 DNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFL 579
E P E+ ++ L RR FS WL + +++E+VS +++ ++ +F
Sbjct: 1288 SQLNE--------PREY-IQILE--RRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFS 1336
Query: 580 LLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDR 639
LTG+++ + LA GD RLA LLSQ GS R + QL W D FI+ +R
Sbjct: 1337 YLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQAD-SFIQDER 1395
Query: 640 IRLYELLAGHIHSSLNDVT-------IDWKRFLGLLMWYQLPPETS----LAIVFQTYQH 688
+R++ LLAG L++ +DWKR L + +WY LPP S L++ + +Q+
Sbjct: 1396 LRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQN 1455
Query: 689 LLD-DGKAPLPVPIYVD-EGPIDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNA 746
D D A P+P Y++ G + S D+ ++L+ L++ + L +
Sbjct: 1456 TSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYSD---RHYDLNQLLEP 1512
Query: 747 LSSTYDPLDYHMIWHQREVLAAVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIYVVLHM 804
S T DPLDY + WH EVL A+ +S+ +L QL +G WAI+V+LH+
Sbjct: 1513 RSITADPLDYRLSWHLWEVLRALNYTHLSAQCEGVLQASYAGQLESEGLWEWAIFVLLHI 1572
Query: 805 PRCDDYPYLQATLIREILFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYG 861
D ++ +RE+L ++C+ + ES K F+ + L VP++W+HEA AV +
Sbjct: 1573 ----DNSGIREKAVRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAV--RAHM 1626
Query: 862 ELSKALEHF--LECANWQKAHSIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENW 917
E K LE + +W + H + + +A ++ N+ + + S I++W
Sbjct: 1627 ESDKHLEALCLFKAEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDW 1686
Query: 918 DLGAGMYI----VFYLIRSSLQEENNTMSDL--VRIKKTQHC 953
+ +Y+ V ++R +Q+ + + +DL + IK T C
Sbjct: 1687 ETSGLVYLDYIRVIEMLRH-IQQVDCSGNDLEQLHIKVTSLC 1727
Score = 256 (95.2 bits), Expect = 5.2e-66, Sum P(3) = 5.2e-66
Identities = 59/153 (38%), Positives = 91/153 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
+L YYT P ++DL K + + V DFT+GR GYG + F G+ ++ L+LD IV
Sbjct: 735 ILTKVGYYTIPSMDDLAK--ITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIV 792
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD--SD-DFVKKM 156
R E+VVY D++ KP VG+GLN+ AEVTL + + +K D +D ++ ++
Sbjct: 793 HIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRL 852
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
+ + +QGA+F + P +G W F V HFS++GL
Sbjct: 853 EAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGL 885
Score = 59 (25.8 bits), Expect = 5.2e-66, Sum P(3) = 5.2e-66
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 219 VDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEID---D--FSGTPSRQQW 273
++E D S + + LG++P ++ M+ + +EE++D D FS PS+
Sbjct: 963 LEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSRLPSKADT 1022
Query: 274 SLGKEYIRPPLQNTAQRMSQRSS 296
S +E P L +A S+ S
Sbjct: 1023 S--QEICSPRLPISASHSSKTRS 1043
>UNIPROTKB|E1BCV4 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0000776 GO:GO:0006260
GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
OMA:VNRDSED EMBL:DAAA02040991 IPI:IPI00701747
Ensembl:ENSBTAT00000011092 Uniprot:E1BCV4
Length = 1816
Score = 505 (182.8 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 207/782 (26%), Positives = 351/782 (44%)
Query: 217 SDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEIDD-----FSGTPSRQ 271
S ++E D S + + LG++P ++ M+ + +EE++D S PS+
Sbjct: 960 SMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDTVLDQRISHLPSKA 1019
Query: 272 QWSLGKEYIRPPLQNTAQRMSQRSS----------------SPLAR----KTP--VGLLE 309
S +E P L +A S+ S SP A +TP L+
Sbjct: 1020 DTS--QEICSPRLPISATHSSKPRSLVSGLLQSKFTSGTFLSPSASLQECRTPRTSSLMN 1077
Query: 310 YHPGNSDSDSPGMILMAQQNKGMPLKKLKSDGFKLD---LKHETPVTGSHSHNIVDAGLF 366
P + S P + + P +LK+ G + + + VT ++D LF
Sbjct: 1078 IPPTSPWSVPPPLTSVFTVPSPAPEFQLKTVGTRRQPGLVPLKKSVTYGKGKLLMDMALF 1137
Query: 367 MGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINVEKVAIDKVVRD---ENDKVRKELV 423
MGR+FRVGWGPN L +SG +S + +E I + N K L
Sbjct: 1138 MGRSFRVGWGPNWTLANSGEQ--------LSGSLELENHQIADCMEYGFLPNPVAVKSLT 1189
Query: 424 DFSFDAPLNLHK-ELNHETEEVEVGSYKLKLQ-KVVSNSLMLSEICRSYID-----IIEA 476
+ F ++L K L + + ++ Y+ L+ K+ +++ + E+C + +I
Sbjct: 1190 ESPFK--VHLEKLSLRQKKLDKDLQLYQTSLELKLKHSTVHVDELCPLIVPNPGVAVIHD 1247
Query: 477 QLDVPGVSSSTRLVLMHQVMV-WELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPE 535
D + ++R +L Q++ W L L G L+ E D +E P E
Sbjct: 1248 YAD--WIKEASRDLLEPQIVKHWSLTWTLCEAL--WGHLK-ELDSQLDE--------PSE 1294
Query: 536 FDLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAAS 595
+ ++ L RR FS WL + +++E+VS + N ++ +F LTG+++ + LA
Sbjct: 1295 Y-IQILE--RRRAFSRWLSSTASPQIEEEVSLTRKDNPMEAVFSYLTGKRISEACSLAQQ 1351
Query: 596 RGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLN 655
GD RLA LLSQ GS R + QL W D FI+++R+R++ LLAG L+
Sbjct: 1352 SGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADC-FIQEERLRIFALLAGKPVWQLS 1410
Query: 656 DVT-------IDWKRFLGLLMWYQLPPETS----LAIVFQTYQHLLD-DGKAPLPVPIYV 703
+ +DWKR L + +WY LPP S L++ + +Q+ D D A P+P Y+
Sbjct: 1411 EQKQINVCSQLDWKRSLAVHLWYLLPPTASISKALSMYEEAFQNTSDSDRYACCPLPSYL 1470
Query: 704 D-EGPIDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQ 762
+ G + E S D+ ++L+ L++ + L + S T DPLDY + WH
Sbjct: 1471 EGSGYVVEEEQDSQRPLQDVCFHLLKLYSD---RHYDLNQLLEPRSVTADPLDYRLSWHL 1527
Query: 763 REVLAAVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIRE 820
EVL A+ +S +L QL +G WAI+V+LH+ D + +RE
Sbjct: 1528 WEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVLLHI----DNSSTREKAVRE 1583
Query: 821 ILFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYGELSKALE--HFLECAN 875
+L ++C+ + ES K F+ E L VP+EW+HEA AV + E K LE + + +
Sbjct: 1584 LLTRHCQLLETPESWAKETFLTEKLCVPAEWIHEAKAV--RAHMESDKHLEALYLFKAGH 1641
Query: 876 WQKAHSIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENWDLGAGMYIVFYLIRSS 933
W + H + + +A ++ N+ + + I++W+ +Y+ + +
Sbjct: 1642 WNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPLERSGLIQDWETSGLVYLDYIRVIEM 1701
Query: 934 LQ 935
L+
Sbjct: 1702 LR 1703
Score = 255 (94.8 bits), Expect = 1.4e-65, Sum P(2) = 1.4e-65
Identities = 58/153 (37%), Positives = 91/153 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
+L YYT P ++DL K + + V DFT+GR GYG + F G+ ++ L+LD IV
Sbjct: 734 ILTKVGYYTIPSMDDLAK--ITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIV 791
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD--SD-DFVKKM 156
R E++VY D++ KP VG+GLN+ AEVTL + + +K D +D ++ ++
Sbjct: 792 HIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRL 851
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
+ + +QGA+F + P +G W F V HFS++GL
Sbjct: 852 EAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGL 884
Score = 37 (18.1 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 11/47 (23%), Positives = 24/47 (51%)
Query: 909 SHKSEIENWDLGAGMYIVFYLIRSSLQEENNTMSDLVRIKKTQHCEI 955
S+ ++E+ G + +F L+ + ++T VR T+HC++
Sbjct: 1550 SYAGQLESE--GLWEWAIFVLLHI---DNSSTREKAVRELLTRHCQL 1591
>ZFIN|ZDB-GENE-040426-1180 [details] [associations]
symbol:nup98 "nucleoporin 98" species:7955 "Danio
rerio" [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
ZFIN:ZDB-GENE-040426-1180 GO:GO:0006810 GO:GO:0005643
SUPFAM:SSF82215 GeneTree:ENSGT00550000074799 InterPro:IPR021967
Pfam:PF12110 EMBL:CR847523 IPI:IPI00997719
Ensembl:ENSDART00000130950 Bgee:E7F981 Uniprot:E7F981
Length = 1807
Score = 489 (177.2 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 169/641 (26%), Positives = 292/641 (45%)
Query: 349 ETPVTGSHSHNIVDAGLFMGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINV-----E 403
E +T ++DA LF GR+FRVGWGPN LVHSG + + N+
Sbjct: 1112 EASITLGKGRLLMDAALFRGRSFRVGWGPNWTLVHSGDQLSVTHPVKEPAAENLGFGFLP 1171
Query: 404 KVAIDKVVRDENDKVRKELVDFSFDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNSLML 463
K K + + KVR E V + P + L+ +E+G + +
Sbjct: 1172 KPTKTKPITESPFKVRVEQV-VGLE-PKQSSESLSLYLRPLEIGLKHSTINTEEPCPFIQ 1229
Query: 464 S----EICRSYID-IIEAQLDVPGVSSSTRLVLMHQVMVWELIKVLFSERENGGQLRSEG 518
+ Y + I+E D+ G + L H VW L L+ G+L G
Sbjct: 1230 PAGGVDALHGYAEWIVEVNKDIGGSDAG----LAHWKQVWTLCAALW------GRL---G 1276
Query: 519 D-DNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHI 577
D D + E D + LE RR FS WL + + ++E+V + ++ + +
Sbjct: 1277 DRDLDTEQYSDYQQ-----QLE-----RRRSFSHWLSDCAANCIEEEVGRALQRSHAEAV 1326
Query: 578 FLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEK 637
F LTG + + +L+ GD RL+ +LSQA GS R +A QL W D FIE+
Sbjct: 1327 FSYLTGHCISKACKLSQKSGDHRLSLMLSQAVGSQFCRDLLALQLTDWNRMQTD-SFIEE 1385
Query: 638 DRIRLYELLAGH-IHSS----LNDVT-IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLD 691
+R+R++ LLAG + S +N + +DWKR + + +WY LPP S+A Y+
Sbjct: 1386 ERLRIFALLAGKPVWQSTDCCINVCSELDWKRCVAVHLWYMLPPTASVADALTKYETAFQ 1445
Query: 692 DGK-----APLPVPIYVDEGPI---DEPIDWSGNERN--DLSYYLMLLHASGESKFGSLK 741
+ A P+P Y+DE + DE +D +++ D+ ++L+ L++ + SL+
Sbjct: 1446 GSEEVKRYAGPPLPPYIDELELLGLDEDMDEIDSKKPLYDICFHLLKLYSD---RHYSLQ 1502
Query: 742 TMFNALSSTYDPLDYHMIWHQREVLAAVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIY 799
+ + + T D LDY + WH VL A+ ++++ +L +QL G AI+
Sbjct: 1503 QLLDPSTVTADHLDYRLSWHLWSVLQALNYNHLATSCQGLLHASYAAQLESAGLWEMAIF 1562
Query: 800 VVLHMPRCDDYPYLQATLIREILFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVY 856
V+LH+ + + +RE+L +C +EES K F+ E L +P +W+H+A A+
Sbjct: 1563 VLLHITDSGR----RESAVREMLSLHCSLEETEESMEKEQFLTEKLLIPIQWIHQAKAIR 1618
Query: 857 YNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDVWTL--ATSMESHKSEI 914
G+ + H + +W H + + +A ++ NH + ++ +I
Sbjct: 1619 ACREGDKHREALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLDFLEGLAVPERSVQI 1678
Query: 915 ENWDLGAGMYIVFYLIRSSLQEENNTMSDLVRIKKTQHCEI 955
+ WD +++ + + +LQ+ S +++ H E+
Sbjct: 1679 QGWDTSGRVFLDYIHVIQTLQDIQQMESPGYELERL-HTEV 1718
Score = 269 (99.8 bits), Expect = 2.7e-65, Sum P(2) = 2.7e-65
Identities = 60/153 (39%), Positives = 91/153 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
VL YYT P + +LGK +++ V +FT+GR GYG V F G ++ + LD+IV
Sbjct: 729 VLSRVGYYTIPSMEELGK--MLNENGECIVENFTIGRKGYGSVFFPGEVNLTNMILDEIV 786
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD---SDDFVKKM 156
F R EI+VY D+ KP VG+GLN+ AEVTL + + ++K D ++ ++
Sbjct: 787 HFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCCQIKSPDRLTEMNYEGRL 846
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
+ + +QGARF+ + P +G W F V HFS++GL
Sbjct: 847 EAASRKQGARFLEYRPETGSWVFEVAHFSKYGL 879
>UNIPROTKB|E2R4V6 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006810 "transport" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
KO:K14297 GeneTree:ENSGT00550000074799 InterPro:IPR021967
Pfam:PF12110 CTD:4928 OMA:VNRDSED EMBL:AAEX03012830
EMBL:AAEX03012829 RefSeq:XP_861730.1 Ensembl:ENSCAFT00000009477
GeneID:476822 KEGG:cfa:476822 Uniprot:E2R4V6
Length = 1800
Score = 500 (181.1 bits), Expect = 3.8e-65, Sum P(2) = 3.8e-65
Identities = 206/778 (26%), Positives = 348/778 (44%)
Query: 217 SDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEID---D--FSGTPSRQ 271
S ++E D S + + LG++P ++ M+ + +EE++D D FS PS+
Sbjct: 944 SMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDVDMVLDQRFSHLPSKA 1003
Query: 272 QWSLGKEYIRPPLQNTAQRMSQRSS----------------SPLAR----KTP-VGLLEY 310
S +E P L +A S+ S SP A +TP L
Sbjct: 1004 DTS--QEICSPRLPISASHSSKSRSLVGGLLQSKFTSGSFLSPSASVQECRTPRAASLMN 1061
Query: 311 HPGNSD-SDSPGMILMAQQNKGMPLKKLKSDGFKLD---LKHETPVTGSHSHNIVDAGLF 366
P S S P + + P +LK+ G + + E VT ++D LF
Sbjct: 1062 IPSTSPWSVPPPLTSVFTVPSPAPEIQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALF 1121
Query: 367 MGRAFRVGWGPNGILVHSGAPVGSNSRGVISSVINVEKVAIDKVVRDENDKVRKELVDFS 426
MGR+FRVGWGPN L +SG + S S + + I + + + N K L +
Sbjct: 1122 MGRSFRVGWGPNWTLANSGEQL-SGSHELENHQI-ADSMEYGFL---PNPVAVKSLTESP 1176
Query: 427 FDAPLNLHK-ELNHETEEVEVGSYKLKLQ-KVVSNSLMLSEICRSYIDI--IEAQLDVPG 482
F ++L K L + + ++ Y++ L+ K+ +++ + E+C + + D
Sbjct: 1177 FK--VHLEKLSLRQKKPDEDIQLYQIPLELKLKHSTVHVDELCPLIVPNPGVAVIHDYAN 1234
Query: 483 -VSSSTRLVLMHQVMV-WELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEA 540
V ++ L Q++ W L L G L+ E D +E P E+ ++
Sbjct: 1235 WVKKASGDFLEAQIVKHWSLTWTLCEAL--WGHLK-EPDSQLDE--------PSEY-IQI 1282
Query: 541 LPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVR 600
L RR FS WL + ++E+VS + ++ +F LTG+++ + LA GD R
Sbjct: 1283 LE--RRRTFSRWLSHTAAPLIEEEVSLTRKDKPVEAVFSYLTGKRISEACSLAQQSGDHR 1340
Query: 601 LACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHI------HSSL 654
LA LLSQ GS R + QL W+ + FI+ +R+R++ LLAG H +
Sbjct: 1341 LALLLSQLVGSQSIRELLTMQLVDWQQLQANC-FIQDERLRIFALLAGKPVWQLTEHRQI 1399
Query: 655 NDVT-IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLD-----DGKAPLPVPIYVD-EGP 707
N + +DWKR L + +WY LPP S++ Y+ D A P+P Y++ G
Sbjct: 1400 NVCSFLDWKRALAVHLWYLLPPTASISRALSMYEEAFQSSSEADRYACSPLPSYLEGSGY 1459
Query: 708 IDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLA 767
+ E S D+ ++L+ L++ + L + S T DPLDY + WH EVL
Sbjct: 1460 VIEEEQNSQRPLQDVCFHLLKLYSD---RHYDLNQLLEPRSVTADPLDYRLSWHLWEVLR 1516
Query: 768 AVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQY 825
A+ +S +L QL +G WA++V+LH+ D ++ +RE+L ++
Sbjct: 1517 ALNYTHLSEQCEGVLQTSYAGQLESEGLWEWAVFVLLHI----DNSSMREKAVRELLTRH 1572
Query: 826 CESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYGELSKALE--HFLECANWQKAH 880
C+ + ES K F+ + L VP+EW++EA AV + E K LE + + +W + H
Sbjct: 1573 CQLVETPESWAKETFLTQKLCVPAEWINEAKAV--RAHMESDKHLEALYLFKAGHWNRCH 1630
Query: 881 SIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENWDLGAGMYIVFYLIRSSLQE 936
+ +A ++ N+ + + S I++W+ +Y+ + I L +
Sbjct: 1631 KFIIKHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRIIEMLHQ 1688
Score = 256 (95.2 bits), Expect = 3.8e-65, Sum P(2) = 3.8e-65
Identities = 59/153 (38%), Positives = 91/153 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
VL YYT P ++DL K + + V DFT+GR GYG + F G+ ++ L+LD IV
Sbjct: 718 VLTKVGYYTIPSMDDLAK--ITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIV 775
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD--SD-DFVKKM 156
R E++VY D++ KP VG+GLN+ AEVTL + + +K D +D ++ ++
Sbjct: 776 HIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRL 835
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
+ + +QGA+F + P +G W F V HFS++GL
Sbjct: 836 EAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGL 868
Score = 39 (18.8 bits), Expect = 7.1e-16, Sum P(2) = 7.1e-16
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 296 SSPLARKTPVGLLEYHPG 313
S+P ++ P+GLL H G
Sbjct: 1754 STPDPQRVPLGLLAPHIG 1771
>UNIPROTKB|F1SUZ2 [details] [associations]
symbol:NUP98 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006260 "DNA replication" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0000776 GO:GO:0006260
GO:GO:0006810 GO:GO:0005643 SUPFAM:SSF82215
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
OMA:VNRDSED EMBL:CU928773 EMBL:FP103078 Ensembl:ENSSSCT00000016145
Uniprot:F1SUZ2
Length = 1702
Score = 502 (181.8 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 208/783 (26%), Positives = 348/783 (44%)
Query: 216 VSD--VDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEID---D--FSGTP 268
VSD ++E D S + + LG++P ++ M+ + +EE+ D D FS P
Sbjct: 843 VSDSMLEESVPEDQEPVSASTHIASSLGINPHVLQIMKASLLADEEDADMVLDQRFSRLP 902
Query: 269 SRQQWSLGKEYIRPPLQNTAQRMSQRSS----------------SPLAR----KTP--VG 306
S+ S +E P L +A S+ S SP A +TP
Sbjct: 903 SKADTS--QEICSPRLPISAAHSSKSRSLVGGLLQSKFTSGTFLSPSASLQESRTPRASS 960
Query: 307 LLEYHPGNSDSDSPGMILMAQQNKGMPLKKLKSDGFKLD---LKHETPVTGSHSHNIVDA 363
++ P S P + P LK+ G + + E VT ++D
Sbjct: 961 WMKIPPAAPWSAPPPLTSAFTVPSPAPEVPLKTVGTRRQPGLVPLEKSVTYGKGRLLMDM 1020
Query: 364 GLFMGRAFRVGWGPNGILVHSGAPV-GSNSRGVISSVINVEKVAIDKVVRDENDKVRKEL 422
LFMGR+FRVGWGPN L +SG + GS + ++E + V K L
Sbjct: 1021 ALFMGRSFRVGWGPNWTLANSGEQLSGSQELEHHQTTDSMEYGFLPNAV------AVKSL 1074
Query: 423 VDFSFDAPLNLHK-ELNHETEEVEVGSYKLKLQ-KVVSNSLMLSEICRSYID-----IIE 475
+ F ++L K L + + ++ Y+ L+ K+ +++ + E+C + +I
Sbjct: 1075 TESPFK--VHLEKLSLRQKKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVAVIH 1132
Query: 476 AQLDVPGVSSSTRLVLMHQVMV-WELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPP 534
D V ++ +L Q++ W L L G L+ E D +E P
Sbjct: 1133 DYAD--WVKEASGDLLEAQIVKHWSLTWTLCEAL--WGHLK-ELDSQLDE--------PS 1179
Query: 535 EFDLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAA 594
E+ ++ L RR FS WL + +++E+VS + N ++ +F LTG+++ + LA
Sbjct: 1180 EY-VQILE--RRRAFSRWLSHTAAPQIEEEVSLTRKDNPVEAVFSFLTGKRISEACSLAQ 1236
Query: 595 SRGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSL 654
GD RLA LLSQ GS R + QL W D FI+ +R+R++ LLAG L
Sbjct: 1237 QSGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADC-FIQDERLRVFALLAGKPVWQL 1295
Query: 655 NDVT-------IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGK-----APLPVPIY 702
++ +DWKR L + +WY LPP S++ Y+ D A P+P Y
Sbjct: 1296 SEQKHINVCSQLDWKRSLAVHLWYLLPPTASISRALSMYEEAFQDTSEGDRYACCPLPSY 1355
Query: 703 VD-EGPIDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWH 761
++ G + E S D+ ++L+ L++ + L + S T DPLDY + WH
Sbjct: 1356 LEGSGYMVEEEQDSQRPLQDVCFHLLKLYSD---RHYDLSQLLEPRSVTADPLDYRLSWH 1412
Query: 762 QREVLAAVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIR 819
EVL A+ +S +L QL +G WA++V+LH+ D ++ +R
Sbjct: 1413 LWEVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAVFVLLHI----DNSSIREKAVR 1468
Query: 820 EILFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYGELSKALE--HFLECA 874
E+L ++C+ + ES K F+ + L VP+EW+HEA AV + E K LE + +
Sbjct: 1469 ELLTRHCQLLETPESWAKEAFLTQKLCVPAEWIHEAKAV--RAHMESDKHLEALYLFKAG 1526
Query: 875 NWQKAHSIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENWDLGAGMYIVFYLIRS 932
+W + H + + +A ++ N+ + + S I++W+ +Y+ + +
Sbjct: 1527 HWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRVIE 1586
Query: 933 SLQ 935
L+
Sbjct: 1587 MLR 1589
Score = 247 (92.0 bits), Expect = 1.7e-64, Sum P(2) = 1.7e-64
Identities = 59/154 (38%), Positives = 91/154 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
VL YYT P ++DL K + + V DFT+GR GYG + F G+ ++ L+LD IV
Sbjct: 617 VLTKVGYYTIPSMDDLAK--ITNEKGECVVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIV 674
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD--SD-DFVKKM 156
R E++VY D++ KP VG+GLN+ AEVTL + + +K D +D ++ ++
Sbjct: 675 HIRRKEVIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRL 734
Query: 157 KERTERQGARFVSFDPVSGEWKF-LVVHFSRFGL 189
+ + +QGA+F + P +G W LV HFS++GL
Sbjct: 735 EAVSRKQGAQFKEYRPETGSWVIKLVSHFSKYGL 768
>RGD|71033 [details] [associations]
symbol:Nup98 "nucleoporin 98" species:10116 "Rattus norvegicus"
[GO:0000059 "protein import into nucleus, docking" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IEA;ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005635 "nuclear envelope" evidence=ISO] [GO:0005643 "nuclear
pore" evidence=IEA;ISO;ISS;IDA] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA;ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=ISO;ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0031965 "nuclear membrane"
evidence=ISO;ISS;IDA] [GO:0034399 "nuclear periphery"
evidence=ISO;ISS;IDA] [GO:0042277 "peptide binding" evidence=IDA]
[GO:0042405 "nuclear inclusion body" evidence=ISO;IDA] [GO:0044615
"nuclear pore nuclear basket" evidence=ISO;IDA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051292 "nuclear pore complex assembly"
evidence=ISO;ISS] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
RGD:71033 GO:GO:0005654 EMBL:CH473956 GO:GO:0042277 eggNOG:NOG12793
GO:GO:0051028 GO:GO:0031080 GO:GO:0000059 SUPFAM:SSF82215 KO:K14297
GeneTree:ENSGT00550000074799 InterPro:IPR021967 Pfam:PF12110
MEROPS:S59.001 CTD:4928 HOVERGEN:HBG052702 EMBL:L39991
IPI:IPI00197380 IPI:IPI00389189 PIR:A56517 RefSeq:NP_112336.2
UniGene:Rn.11324 ProteinModelPortal:P49793 STRING:P49793
PhosphoSite:P49793 PRIDE:P49793 Ensembl:ENSRNOT00000027575
GeneID:81738 KEGG:rno:81738 UCSC:RGD:71033 HOGENOM:HOG000044579
OrthoDB:EOG437RD1 ArrayExpress:P49793 Genevestigator:P49793
GermOnline:ENSRNOG00000020347 Uniprot:P49793
Length = 1816
Score = 486 (176.1 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 206/771 (26%), Positives = 338/771 (43%)
Query: 217 SDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEIDD----FSGTPSRQQ 272
S ++E D S + + LG++P ++ M+ + +EE++D F PSR
Sbjct: 961 SVLEESVPEDQEPVSASTQIASSLGINPHVLQIMKASLLVDEEDVDAMEQRFGHFPSRGD 1020
Query: 273 WSLGKEYIRPPLQNTAQRMSQRSS----------------SPLAR----KTP-VGLLEYH 311
+ +E P L +A S+ S SP A +TP L
Sbjct: 1021 TA--QEICSPRLPISASHSSKSRSIVGGLLQSKFASGTFLSPSASVQECRTPRTSSLMNV 1078
Query: 312 PGNSDSDSP-GMILMAQQNKGMPLKKLKSDGFKLD---LKHETPVTGSHSHNIVDAGLFM 367
P S P + + P LK+ G + + E +T ++D LFM
Sbjct: 1079 PSTSPWSVPLPLATVFTVPSPAPEVPLKTVGIRRQPGLVPLEKSITYGKGKLLMDMALFM 1138
Query: 368 GRAFRVGWGPNGILVHSGAPV-GSNSRGVISSVINVEKVAIDKVVRDENDKVRKELVDFS 426
GR+FRVGWGPN L +SG + GS+ + + E + + N K L +
Sbjct: 1139 GRSFRVGWGPNWTLANSGEQLHGSHE---LENHQVAESMEYGFL---PNPVAVKSLSE-- 1190
Query: 427 FDAPLNLHKE---LNHETEEVEVGSYKLKLQ-KVVSNSLMLSEIC-----RSYIDIIEAQ 477
+P +H E L + ++ Y+ L+ K+ +++ + E+C + +I
Sbjct: 1191 --SPFKVHLEKLGLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHGY 1248
Query: 478 LDVPGVSSSTR-LVLMHQVMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEF 536
D V S R L+ + V W L L G L+ E D +E P E+
Sbjct: 1249 AD--WVKKSPRDLLELPIVKHWSLTWTLCEAL--WGHLK-ELDSQLDE--------PSEY 1295
Query: 537 DLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASR 596
++ L RR FS WL + +++E+VS + ++ +F LTG ++ + LA
Sbjct: 1296 -IQTLE--RRRAFSRWLSHTAAPQIEEEVSLTRRDSPIEAVFSYLTGSRISEACCLAQQS 1352
Query: 597 GDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLND 656
GD RLA LLSQ GS R + QL W D FI +R+R++ LLAG L++
Sbjct: 1353 GDHRLALLLSQLVGSQSVRELLTMQLADWHQLQAD-SFIHDERLRIFALLAGKPVWQLSE 1411
Query: 657 VT-------IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLD-----DGKAPLPVPIYVD 704
+DWKR L + +WY LPP S++ Y+ D A P+P Y++
Sbjct: 1412 QKQINVCSQLDWKRTLAIHLWYLLPPTASISRALSMYEEAFQNTCEGDKYACPPLPSYLE 1471
Query: 705 -EGPIDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQR 763
G + E D+ ++L+ L++ + +G L + S T DPLDY + WH
Sbjct: 1472 GSGCVVEEEKDPQRPLQDVCFHLLKLYS--DRHYG-LNQLLEPRSITADPLDYRLSWHLW 1528
Query: 764 EVLAAVGV--ISSNDLQILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREI 821
EVL A+ +S +L QL +G WAI+V LH+ D ++ +RE+
Sbjct: 1529 EVLRALNYTHLSEQCEGVLQASYAGQLESEGLWEWAIFVFLHI----DNSGMREKAVREL 1584
Query: 822 LFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYGELSKALE--HFLECANW 876
L ++C+ + ES K F+ + L VP+EW+HEA AV + E +K LE + + +W
Sbjct: 1585 LTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKAV--RAHMESNKHLEALYLFKAGHW 1642
Query: 877 QKAHSIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENWDLGAGMYI 925
+ H + V +A ++ N+ + + S I++W+ +Y+
Sbjct: 1643 NRCHKLVVRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYL 1693
Score = 257 (95.5 bits), Expect = 1.1e-63, Sum P(2) = 1.1e-63
Identities = 59/153 (38%), Positives = 91/153 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
VL YYT P ++DL K + + V DFT+GR GYG + F G+ ++ L+LD IV
Sbjct: 735 VLTKVGYYTIPSMDDLAK--ITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIV 792
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD--SD-DFVKKM 156
R E++VY D++ KP VG+GLN+ AEVTL + + +K D +D ++ ++
Sbjct: 793 HIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRL 852
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
+ + +QGA+F + P +G W F V HFS++GL
Sbjct: 853 EAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGL 885
>UNIPROTKB|J3KP29 [details] [associations]
symbol:NUP98 "Nuclear pore complex protein Nup98-Nup96"
species:9606 "Homo sapiens" [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 GO:GO:0006810
GO:GO:0005643 EMBL:AC060812 SUPFAM:SSF82215 InterPro:IPR021967
Pfam:PF12110 EMBL:AC090587 HGNC:HGNC:8068 ChiTaRS:NUP98
ProteinModelPortal:J3KP29 Ensembl:ENST00000359171 Uniprot:J3KP29
Length = 1638
Score = 301 (111.0 bits), Expect = 5.2e-51, Sum P(4) = 5.2e-51
Identities = 132/465 (28%), Positives = 214/465 (46%)
Query: 302 KTP--VGLLEYHPGNSDSDSPGMILMAQQNKGMPLKKLKSDGFKLDL---KHETPVTGSH 356
+TP L+ +S S P + + P LK+ G + L E VT
Sbjct: 1052 RTPRAASLMNIPSTSSWSVPPPLTSVFTMPSPAPEVPLKTVGTRRQLGLVPREKSVTYGK 1111
Query: 357 SHNIVDAGLFMGRAFRVGWGPNGILVHSGAPV-GSNSR-----------GVISSVINVEK 404
++D LFMGR+FRVGWGPN L +SG + GS+ G + + + V+
Sbjct: 1112 GKLLMDMALFMGRSFRVGWGPNWTLANSGEQLNGSHELENHQIADSMEFGFLPNPVAVKP 1171
Query: 405 VAID--KVVRDEND-KVRKELVDFS-FDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNS 460
+ KV ++ + RK D + PL L +L H T V+ +L ++ +
Sbjct: 1172 LTESPFKVHLEKLSLRQRKPDEDMKLYQTPLEL--KLKHSTVHVD------ELCPLIVPN 1223
Query: 461 LMLSEICRSYIDII-EAQLDVPGVSSSTRLVLMHQVMVWELIKVLFSERENGGQLRSEGD 519
L ++ I Y D + EA D+P ++ H + W L + L+ G L+ E D
Sbjct: 1224 LGVAVI-HDYADWVKEASGDLPEAQ-----IVKHWSLTWTLCEALW------GHLK-ELD 1270
Query: 520 DNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFL 579
E P E+ ++ L RR FS WL + +++E+VS +++ ++ +F
Sbjct: 1271 SQLNE--------PREY-IQILE--RRRAFSRWLSCTATPQIEEEVSLTQKNSPVEAVFS 1319
Query: 580 LLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKFIEKDR 639
LTG+++ + LA GD RLA LLSQ GS R + QL W D FI+ +R
Sbjct: 1320 YLTGKRISEACSLAQQSGDHRLALLLSQFVGSQSVRELLTMQLVDWHQLQAD-SFIQDER 1378
Query: 640 IRLYELLAGHIHSSLNDVT-------IDWKRFLGLLMWYQLPPETS----LAIVFQTYQH 688
+R++ LLAG L++ +DWKR L + +WY LPP S L++ + +Q+
Sbjct: 1379 LRIFALLAGKPVWQLSEKKQINVCSQLDWKRSLAIHLWYLLPPTASISRALSMYEEAFQN 1438
Query: 689 LLD-DGKAPLPVPIYVD-EGPIDEPIDWSGNERNDLSYYLMLLHA 731
D D A P+P Y++ G + S D+ ++L+ L++
Sbjct: 1439 TSDSDRYACSPLPSYLEGSGCVIAEEQNSQTPLRDVCFHLLKLYS 1483
Score = 256 (95.2 bits), Expect = 5.2e-51, Sum P(4) = 5.2e-51
Identities = 59/153 (38%), Positives = 91/153 (59%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
+L YYT P ++DL K + + V DFT+GR GYG + F G+ ++ L+LD IV
Sbjct: 718 ILTKVGYYTIPSMDDLAK--ITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIV 775
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGD--SD-DFVKKM 156
R E+VVY D++ KP VG+GLN+ AEVTL + + +K D +D ++ ++
Sbjct: 776 HIRRKEVVVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRL 835
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
+ + +QGA+F + P +G W F V HFS++GL
Sbjct: 836 EAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGL 868
Score = 112 (44.5 bits), Expect = 5.2e-51, Sum P(4) = 5.2e-51
Identities = 30/125 (24%), Positives = 61/125 (48%)
Query: 818 IREILFQYCESWSSEESQRK--FI-EALGVPSEWLHEAMAVYYNYYGELSKALEHF--LE 872
+RE+L ++C+ + ES K F+ + L VP++W+HEA AV + E K LE +
Sbjct: 1491 VRELLTRHCQLLETPESWAKETFLTQKLRVPAKWIHEAKAV--RAHMESDKHLEALCLFK 1548
Query: 873 CANWQKAHSIFVTSVAHTLFLSANHSDVWTLATSME--SHKSEIENWDLGAGMYIVFYLI 930
+W + H + + +A ++ N+ + + S I++W+ +Y+ + +
Sbjct: 1549 AEHWNRCHKLIIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIRV 1608
Query: 931 RSSLQ 935
L+
Sbjct: 1609 IEMLR 1613
Score = 59 (25.8 bits), Expect = 5.2e-51, Sum P(4) = 5.2e-51
Identities = 22/83 (26%), Positives = 39/83 (46%)
Query: 219 VDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEID---D--FSGTPSRQQW 273
++E D S + + LG++P ++ M+ + +EE++D D FS PS+
Sbjct: 946 LEESMPEDQEPVSASTHIASSLGINPHVLQIMKASLLTDEEDVDMALDQRFSRLPSKADT 1005
Query: 274 SLGKEYIRPPLQNTAQRMSQRSS 296
S +E P L +A S+ S
Sbjct: 1006 S--QEICSPRLPISASHSSKTRS 1026
>DICTYBASE|DDB_G0291390 [details] [associations]
symbol:nup98 "putative nucleoporin 98" species:44689
"Dictyostelium discoideum" [GO:0006810 "transport" evidence=IEA]
[GO:0005643 "nuclear pore" evidence=IEA;ISS] [GO:0006913
"nucleocytoplasmic transport" evidence=ISS] [GO:0005215
"transporter activity" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 dictyBase:DDB_G0291390
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0015031
GO:GO:0031965 GO:GO:0005643 GO:GO:0006913 GO:GO:0005215
eggNOG:NOG12793 GO:GO:0051028 InterPro:IPR025574 Pfam:PF13634
SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967 Pfam:PF12110
OMA:DYNQGRR RefSeq:XP_635182.1 HSSP:Q9Y6J4
ProteinModelPortal:Q54EQ8 MEROPS:S59.A08 EnsemblProtists:DDB0235244
GeneID:8628128 KEGG:ddi:DDB_G0291390 Uniprot:Q54EQ8
Length = 2053
Score = 366 (133.9 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 106/423 (25%), Positives = 198/423 (46%)
Query: 544 IRRAEFSCWLKESVCHRVQEDVSSLDE---SNYLKHIFLLLTGRQLDSSVELAASRGDVR 600
IR+ + WLK+ + +++++ SL + SNYL+ IF L+ +Q+ + +LA D R
Sbjct: 1533 IRKLNLNQWLKDVIAPLLRDEMDSLRKKTNSNYLEQIFSYLSAKQIKEASDLANENKDFR 1592
Query: 601 LACLLSQAGGSTVSRSD-IAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIHSSLNDVTI 659
LA ++SQ S+ S + I QL + NG D +FI + R+ + L+AG ++ ++
Sbjct: 1593 LATMMSQIWSSSESGKELILKQLTTYHSNGSD-EFINEKRLEILHLIAGSVNKIYKNLN- 1650
Query: 660 DWKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKAPLPVPIYVDEGPIDEPIDWSGNER 719
DW R + W++ E S+ + ++ + ++ P+P Y+ + +
Sbjct: 1651 DWIRCFAVSFWFKYSLEYSIEDSVENFERSFNAHRSVYPLPPYLIKSTSTNSKQIEEQQH 1710
Query: 720 N-DLSYYLMLLHA--SGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVGVISSN- 775
D+ + L+ L A G S F K +F + D LDYH+ W+ VL ++ ++
Sbjct: 1711 YYDICFLLLKLFAVNRGSSHFDKFKNIFYPENIGQDLLDYHLSWNLYTVLKSIPSLNKQP 1770
Query: 776 DL---QILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSE 832
DL L QL G W+IYV+LH P D +++ ++ ++ + +SE
Sbjct: 1771 DLVNASNLHSSFALQLERLGLWQWSIYVLLHTP--DQSNHVREEAVKSLIARAAPVITSE 1828
Query: 833 ESQRKFIEA-LGVPSEWLHEAMAVY--YNYYGELSKALEHFLECANWQKAHSIFVTSVAH 889
+ R F+ L +P W+ EA A Y Y+ ++ ++ + + K H I +++
Sbjct: 1829 D--RVFLTTKLHIPEIWIDEAKAWYSGYDCNNDIYDQIDALFKSYQYTKIHDIIFSNIGP 1886
Query: 890 TLFLSANHSDVWTLATSMESHKSEIENWDLGAGMYIVFYLI----RSSLQEENNTMSDLV 945
+ + + L +E H S I W G +++ F I + L + +NT ++
Sbjct: 1887 NYIIQKRYHSLKDLLIRLEPHSSFISTWRYGGSIFLEFADICIQYKEILSQLSNTAEEIQ 1946
Query: 946 RIK 948
R K
Sbjct: 1947 RTK 1949
Score = 206 (77.6 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 53/150 (35%), Positives = 81/150 (54%)
Query: 42 PVLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQI 101
P L Y P + +L K+ D SS V FT+ R G G + F G+T++ LDLD I
Sbjct: 1021 PKLTRDGYQCVPSIKELSKKT--DKELSS-VQGFTISRDGCGSIYFPGSTNLVALDLDDI 1077
Query: 102 VKFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGDS-DDFVKKMK 157
V E+ VY+DE +KPE+G GLN+ A VTL + + + + ++G D + +K
Sbjct: 1078 VDIEPREVSVYKDEETKPEIGYGLNRDAVVTLENCWPKNKNGEVVKEDGTILDKYENALK 1137
Query: 158 ERTERQGARFVSFDPVSGEWKFLVVHFSRF 187
+ + + FVS+ +G W F V HFS++
Sbjct: 1138 KVSAKSDCGFVSYSRSNGTWVFTVKHFSKY 1167
Score = 81 (33.6 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 357 SHNIVDAGLFMGRAFRVGWGPNGILV 382
+H+ D LFM R+FRVGW P G L+
Sbjct: 1400 NHSTQDVSLFMRRSFRVGWAPGGKLI 1425
Score = 48 (22.0 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 18/69 (26%), Positives = 33/69 (47%)
Query: 502 KVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCW--LKESVCH 559
K L S N Q + + + EE+ + IK+ EF P + R + C +KE +
Sbjct: 983 KSLSSSSSNKSQQQQQKEQKEEQPPKPIKE--KEFINPNAPKLTRDGYQCVPSIKE-LSK 1039
Query: 560 RVQEDVSSL 568
+ +++SS+
Sbjct: 1040 KTDKELSSV 1048
Score = 43 (20.2 bits), Expect = 4.0e-27, Sum P(3) = 4.0e-27
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 550 SCWLKESVCHRVQEDVSSLDE-SNYLKHI 577
+CW K V+ED + LD+ N LK +
Sbjct: 1111 NCWPKNKNGEVVKEDGTILDKYENALKKV 1139
Score = 42 (19.8 bits), Expect = 1.7e-47, Sum P(4) = 1.7e-47
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 3 LDARTFASCNNIPQYRKRN 21
++ TF S + +PQY R+
Sbjct: 239 IEGNTFVSISAMPQYNDRS 257
Score = 40 (19.1 bits), Expect = 3.0e-43, Sum P(4) = 3.0e-43
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 516 SEGDDNEEEMMQDIK 530
S GD+N++EM+ K
Sbjct: 1223 SSGDENQDEMVPQKK 1237
Score = 38 (18.4 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 375 WGPNGILVHSGAP-VGSN-SRGVISSVINVE---KVAIDKVVRDENDKVRKE 421
WG +L +G+ + +N S I +N+ K I ++RDE D +RK+
Sbjct: 1512 WG--NVLKGNGSKYINTNYSEDTIRK-LNLNQWLKDVIAPLLRDEMDSLRKK 1560
>FB|FBgn0039120 [details] [associations]
symbol:Nup98-96 "Nucleoporin 98-96kD" species:7227
"Drosophila melanogaster" [GO:0005643 "nuclear pore"
evidence=ISS;IPI] [GO:0006911 "phagocytosis, engulfment"
evidence=IMP] [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=ISS] [GO:0044613 "nuclear pore central transport channel"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007184 "SMAD protein import into nucleus" evidence=IMP]
[GO:0030718 "germ-line stem cell maintenance" evidence=IMP]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 EMBL:AE014297
GO:GO:0006911 GO:GO:0005643 GO:GO:0030718 GO:GO:0007184
SUPFAM:SSF82215 KO:K14297 GeneTree:ENSGT00550000074799
InterPro:IPR021967 Pfam:PF12110 OMA:PTINEMK CTD:4928 MEROPS:S59.A04
FlyBase:FBgn0039120 RefSeq:NP_651187.2 UniGene:Dm.14811
ProteinModelPortal:Q9VCH5 SMR:Q9VCH5 IntAct:Q9VCH5 MINT:MINT-280386
STRING:Q9VCH5 EnsemblMetazoa:FBtr0084460 GeneID:42816
KEGG:dme:Dmel_CG10198 UCSC:CG10198-RA InParanoid:Q9VCH5
PhylomeDB:Q9VCH5 GenomeRNAi:42816 NextBio:830718
ArrayExpress:Q9VCH5 Bgee:Q9VCH5 Uniprot:Q9VCH5
Length = 1960
Score = 304 (112.1 bits), Expect = 1.8e-44, Sum P(3) = 1.8e-44
Identities = 127/512 (24%), Positives = 228/512 (44%)
Query: 453 LQKVVSNSLMLSEICR-SYIDIIEAQL-DVPGVS-SSTRLVLMHQVMVWELIKVLFSE-- 507
+Q V N + +E R S I +E QL D V+ + +H +L+ FSE
Sbjct: 1351 MQLVEFNMVKGNEGFRESIIPHLEVQLNDCLSVNVEGSECPCIHPDSGTKLVSKHFSESL 1410
Query: 508 RENGGQLRSEGDDNEEEMMQDIKDGPPEF-DLEA----LPLIRRAEFSCWLKESVCHR-- 560
++ L+ + + ++ + E DLE + + RR S WL+ ++ +
Sbjct: 1411 KQRNAGLKEDYSVSVWSLLFALWGDHDELVDLEKNSHYMVMCRRNLLSEWLENTLLGKDL 1470
Query: 561 VQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRSDIAH 620
+ + VS+ +YL+H+ LL+ +++ + ELA S D LA +LSQ V R +
Sbjct: 1471 LSKKVST---HSYLEHMLDLLSCHRVNEACELAFSYDDANLALVLSQLSSGAVFRLLMEE 1527
Query: 621 QLDLWRVNGLDFKFIEKDRIRLYELLAG-----HIHSSLNDV-TIDWKRFLGLLMWYQLP 674
QL W+ + D K+I+ +R+++Y L AG H ++N + +W L L +WY
Sbjct: 1528 QLFAWQQSKSD-KYIDLERLKMYMLAAGAPMMQSSHGAINLLENKNWLTALALQLWYFTA 1586
Query: 675 PETSLAIVFQTYQHLL--DDGKAPLPVPIYVDEGPID--EPIDWSGNERNDLSYYLMLLH 730
P +S+ Y ++ A P P Y D P D +P+ DL Y+L+ LH
Sbjct: 1587 PTSSITDALNAYNDAFQAEECYAEPPKPSYRD-APTDTKKPV-------YDLRYHLLQLH 1638
Query: 731 ASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVGVISSNDLQI--LDMGLVSQL 788
+ + SL+ N ++ T D +D+ + W + L A+G + L L + SQL
Sbjct: 1639 SK---RMHSLEETLNPITHTADAMDFRLSWLLLQTLRALGYRHCSPLTEARLSVDFASQL 1695
Query: 789 LCQGKCHWAIYVVLHMPRCDDYPY-LQATLIREILFQYCESWSSEESQRKFIEALGVPSE 847
+G W I+V+LH+ + +Q L R + + +EE R +E LG+P
Sbjct: 1696 ENEGLWQWGIFVLLHIKQQTQRERAVQQMLQRNVSVSAKVALYAEE--RFIVEELGIPMS 1753
Query: 848 WLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDVWTLATSM 907
W+ A AV G+ ++ L+ ++ AH + +A ++ + +L
Sbjct: 1754 WVDYAKAVKAGASGKHHLQAKYLLKAKHFATAHDVIFQHIAPDAIINGKMKYLHSLLIQF 1813
Query: 908 ESHKSE---IENWDLGAGMYIVFYLIRSSLQE 936
E + + NW +++ F I + ++
Sbjct: 1814 EDTEGSSIRVPNWANQGQIFLDFIDISAKFKQ 1845
Score = 256 (95.2 bits), Expect = 1.8e-44, Sum P(3) = 1.8e-44
Identities = 64/154 (41%), Positives = 86/154 (55%)
Query: 43 VLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIV 102
VL YYT P L+DL R + S VP+FTVGR GYG V F DV L+LD+IV
Sbjct: 883 VLRRVGYYTIPSLDDL--RSYLAEDGSCVVPNFTVGREGYGNVFFGKEMDVAGLNLDEIV 940
Query: 103 KFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSD-------DFVKK 155
F EI++Y D+ +KP +GQGLN+ A+VTL Q L E D D+ K
Sbjct: 941 HFRNKEIIIYPDDENKPPIGQGLNRDAQVTLD-QVWPLDKTKHEAIKDPQRLLEMDWEGK 999
Query: 156 MKERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
++ ++ RF+ + P +G W F V HFS++GL
Sbjct: 1000 LRRVCDKNDTRFIEYRPETGSWVFRVKHFSKYGL 1033
Score = 60 (26.2 bits), Expect = 1.8e-44, Sum P(3) = 1.8e-44
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 360 IVDAGLFMGRAFRVGWGP-NGILVHSGAPVGSNSRGVISSVINVEKVAIDKVVRDENDKV 418
I D G + GR+F++ +GP N +++ S N + + V V + D + V
Sbjct: 1291 IADLGFYKGRSFKLSFGPQNSLVLPSTYNNMQNLKEFTGPSLPVSMVFAPRSATDLSPSV 1350
Query: 419 RKELVDFS 426
+LV+F+
Sbjct: 1351 M-QLVEFN 1357
>TAIR|locus:2012788 [details] [associations]
symbol:AT1G10390 "AT1G10390" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005635 GO:GO:0006810
GO:GO:0005643 eggNOG:NOG12793 SUPFAM:SSF82215 KO:K14297 HSSP:Q9Y6J4
EMBL:AY078948 EMBL:BT003030 EMBL:AK226964 IPI:IPI00523265
RefSeq:NP_001031018.1 RefSeq:NP_172510.2 UniGene:At.27877
ProteinModelPortal:Q8RY25 SMR:Q8RY25 STRING:Q8RY25 MEROPS:S59.A02
PaxDb:Q8RY25 PRIDE:Q8RY25 EnsemblPlants:AT1G10390.1
EnsemblPlants:AT1G10390.2 GeneID:837579 KEGG:ath:AT1G10390
TAIR:At1g10390 HOGENOM:HOG000085153 InParanoid:Q8RY25 OMA:ESISAMP
PhylomeDB:Q8RY25 ProtClustDB:CLSN2713828 Genevestigator:Q8RY25
Uniprot:Q8RY25
Length = 1041
Score = 396 (144.5 bits), Expect = 4.9e-33, P = 4.9e-33
Identities = 83/154 (53%), Positives = 102/154 (66%)
Query: 41 LPVLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQ 100
+P L DY+TEP + +L +E DPGY RV DF VGR GYG +KF+G TDVR LDL+
Sbjct: 880 MPKLRQSDYFTEPRIQELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRLDLES 939
Query: 101 IVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLK----LKEGDSDDFVKKM 156
+V+F E++VY DES KP VGQGLNK AEVTL L + + K EG+ + K M
Sbjct: 940 LVQFNTREVIVYMDESKKPAVGQGLNKPAEVTL-LNIKCIDKKTGKQFTEGERVEKYKMM 998
Query: 157 -KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
K++ E QGA FVSFDPV GEWKF V HFS + L
Sbjct: 999 LKKKAEAQGAEFVSFDPVKGEWKFRVEHFSSYKL 1032
>TAIR|locus:2202887 [details] [associations]
symbol:AT1G59660 "AT1G59660" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005635 "nuclear envelope"
evidence=IDA] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
EMBL:CP002684 GO:GO:0005635 GO:GO:0006810 GO:GO:0005643
SUPFAM:SSF82215 KO:K14297 IPI:IPI00533444 RefSeq:NP_176175.1
UniGene:At.36814 ProteinModelPortal:F4ID16 SMR:F4ID16
MEROPS:S59.A03 PRIDE:F4ID16 EnsemblPlants:AT1G59660.1 GeneID:842256
KEGG:ath:AT1G59660 OMA:PNGGTKG Uniprot:F4ID16
Length = 997
Score = 361 (132.1 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 75/153 (49%), Positives = 98/153 (64%)
Query: 41 LPVLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQ 100
+P L +Y+TEP + +L +E ++ GY RV DF VGR GYG +KFLG TDV LDL+
Sbjct: 839 MPKLHHSEYFTEPRIQELAAKERVEQGYCKRVKDFVVGRHGYGSIKFLGETDVCRLDLEM 898
Query: 101 IVKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLF---LQGRYLSLKLKEGDSDDFVKKM- 156
+V+F E+ VY DES KP VGQGLNK A VTL + ++ EG+ D K+M
Sbjct: 899 VVQFKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMDKKTGTQVMEGERLDKYKEML 958
Query: 157 KERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
K + QGA+FVS+DPV+GEW F V HFS + L
Sbjct: 959 KRKAGEQGAQFVSYDPVNGEWTFKVEHFSSYKL 991
>WB|WBGene00003796 [details] [associations]
symbol:npp-10 species:6239 "Caenorhabditis elegans"
[GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006997 "nucleus organization"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 GO:GO:0009792 GO:GO:0040007 GO:GO:0008406
GO:GO:0002119 GO:GO:0015031 GO:GO:0031965 GO:GO:0005643
GO:GO:0003723 GO:GO:0040039 GO:GO:0030719 GO:GO:0051028
GO:GO:0006997 GO:GO:0043186 InterPro:IPR025574 Pfam:PF13634
SUPFAM:SSF82215 GeneTree:ENSGT00550000074799 InterPro:IPR021967
Pfam:PF12110 EMBL:GU174496 EMBL:FO081350 RefSeq:NP_001254934.1
RefSeq:NP_498309.3 RefSeq:NP_498310.3 UniGene:Cel.17025
ProteinModelPortal:G5EEH9 SMR:G5EEH9 IntAct:G5EEH9 PRIDE:G5EEH9
EnsemblMetazoa:ZK328.5b GeneID:175852 KEGG:cel:CELE_ZK328.5
CTD:175852 WormBase:ZK328.5a WormBase:ZK328.5b WormBase:ZK328.5c
OMA:PTINEMK Uniprot:G5EEH9
Length = 1678
Score = 210 (79.0 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 58/155 (37%), Positives = 82/155 (52%)
Query: 44 LCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIVK 103
L PDY++ P +N++ + +I G TVGR YG V + G +++ + LD+IV
Sbjct: 775 LTKPDYFSLPTINEM--KNMIKNGRVVLEDGLTVGRSSYGSVYWPGRVELKDVALDEIVV 832
Query: 104 FGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSDDFVKKM----KER 159
F E+ VY +E K GQ LN+ AEVTL + Y K K+ + D VK +E
Sbjct: 833 FRHREVTVYPNEEEKAPEGQELNRPAEVTLE-RVWYTDKKTKK-EVRDVVKLSEIGWREH 890
Query: 160 TERQ----GARFVSFDPVSGEWKFLVVHFSRFGLS 190
ERQ GA F F +G W F V HFS++GL+
Sbjct: 891 LERQTIRMGAAFKDFRAETGSWVFRVDHFSKYGLA 925
Score = 130 (50.8 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 53/244 (21%), Positives = 106/244 (43%)
Query: 715 SGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVG--VI 772
+ + R DL L+ L ES+ S++ + + + +P DY + WH +L +VG +
Sbjct: 1382 AASNRGDLPGELIKLAC--ESQH-SVEVVLDCAAGE-NPNDYFLQWHVWSLLYSVGYRTM 1437
Query: 773 SSNDLQILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSE 832
S L SQL +A++V+ H+ DD ++T +R +L + ++
Sbjct: 1438 SKTSETRLHRNYSSQLEASSLSKYALFVLQHID--DDEE--RSTAVRSLLDRIAR-FTDN 1492
Query: 833 ESQRKFIEALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLF 892
+ E +PSEW+ +A + ++ E + N+ + +FV +A T
Sbjct: 1493 DMFDSISEQFDIPSEWIADAQFSIAKSVDDSTQLFELAVAAKNYLEICRLFVDDIAPTAV 1552
Query: 893 LSANHSDVWTLATSMESHKSEIENWDLGAGMYIVFY-----LIRSSLQEENNTMSDLVRI 947
++ +H + + +++I W GM Y LI + +EE + D++
Sbjct: 1553 VAGDHDALKAACAMVRPFENQIPEWG-ATGMVYTDYCRLINLIENDAEEE--LLQDVLES 1609
Query: 948 KKTQ 951
+T+
Sbjct: 1610 LETR 1613
Score = 93 (37.8 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 545 RRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACL 604
R E WL+ V +D S+ SN + + L G +D + ++A +LA +
Sbjct: 1226 RGEEIGEWLRTEAVKSVPDDRSADTSSNGVWNQLCL--G-DIDKAFQIAIDNNQPQLATM 1282
Query: 605 LSQAGGSTVSRSDIAH----QLDLWRVNGLDFKFIEKDRIRLYELLAGHIH--------- 651
L S V H QLD W+ I K+ ++ Y L++G H
Sbjct: 1283 LQT---SAVCPEATVHCFKAQLDNWK-KCETLHLIPKETLKCYVLMSGLSHYEWDQDGKN 1338
Query: 652 SSLNDVT-IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKA 695
S+N + ++W + LGL +WY L T L + YQ ++ G+A
Sbjct: 1339 HSINCLDGLNWIQALGLHVWY-LRAWTGLEESYDAYQKDVNAGRA 1382
Score = 75 (31.5 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 348 HETPVTGSHSHNIVDAGLFMGRAFRVGWGPNGILVHSGAP 387
H + G ++D G+ GR+ VGW G LV S P
Sbjct: 1084 HSAKMIGYGKSKLIDIGIVKGRSSHVGWSETGCLVWSAQP 1123
Score = 56 (24.8 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 29/131 (22%), Positives = 57/131 (43%)
Query: 407 IDKVVR-DENDKVRKELVDFSFDAPLNLHKELNHE-TEEVEVGSYKLKLQKVVSNSLMLS 464
+D++ R +ND + + FD P + + V+ + +L N L
Sbjct: 1483 LDRIARFTDNDMF--DSISEQFDIPSEWIADAQFSIAKSVDDSTQLFELAVAAKNYL--- 1537
Query: 465 EICRSYIDIIEAQLDVPG----VSSSTRLV--LMHQVMVWELIKVLFSERENGGQLRSEG 518
EICR ++D I V G + ++ +V +Q+ W +++++ L
Sbjct: 1538 EICRLFVDDIAPTAVVAGDHDALKAACAMVRPFENQIPEWGATGMVYTDYCRLINLIE-- 1595
Query: 519 DDNEEEMMQDI 529
+D EEE++QD+
Sbjct: 1596 NDAEEELLQDV 1606
Score = 47 (21.6 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 30/107 (28%), Positives = 44/107 (41%)
Query: 431 LNLH-KELNHETEEVEVGSYKLKL-QKVVSNSLMLSEICRSYIDIIEAQLDVPGVSSSTR 488
+N+H E + + + S K L V+ S S + YID+ +A G
Sbjct: 1150 VNVHVSETSRKGPSSQSNSVKSSLTSNFVTYSDSYSSMFAKYIDVAQAG----GYDG--- 1202
Query: 489 LVLMHQVMVWELIKVLFS-ERENGGQL-RSE--GDDNEEEMMQDIKD 531
H V VW+LI LF ER G R E G+ E ++ + D
Sbjct: 1203 ----H-VSVWKLISALFPYERREGWSFERGEEIGEWLRTEAVKSVPD 1244
Score = 43 (20.2 bits), Expect = 8.9e-08, Sum P(4) = 8.9e-08
Identities = 23/104 (22%), Positives = 49/104 (47%)
Query: 336 KLKSDGFKLDLKHETPVTGSHSHNI-VDAGLFMGRAFRVGWGPNGILVHSGAPV-GSNSR 393
KL G++ L+ +T G+ + + G ++ FRV L P+ GS +
Sbjct: 881 KLSEIGWREHLERQTIRMGAAFKDFRAETGSWV---FRVDHFSKYGLADDDEPMDGSPPQ 937
Query: 394 GVISSVINVEKVAIDKVVRDENDKVRKELVDFSFDAPLNLHKEL 437
+ + ++ + ++ RD N++V+++ V + DA H+E+
Sbjct: 938 QALQASSPLQVIDMNTSARDVNNQVQRKKVHKATDAH---HQEI 978
Score = 39 (18.8 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 283 PLQNTAQRMSQRSSSPLARKTPVGLLEY---HPGNSDSDSPGMILMAQQ------NKGMP 333
P+Q QR + R+ P + E+ P ++ + S ++ N
Sbjct: 713 PVQAVIQRHNDRNRDPPSLNLDTTCDEHTGLEPVSAATSSAASVVSTPSEETVNVNSAAG 772
Query: 334 LKKLKSDGFKLDLKHETPVTGSHSHNIVDAGLFMGRA 370
+K K D F L +E + +++ GL +GR+
Sbjct: 773 VKLTKPDYFSLPTINEMKNMIKNGRVVLEDGLTVGRS 809
>UNIPROTKB|G5EEH9 [details] [associations]
symbol:npp-10 "Nuclear pore complex protein Nup98-Nup96"
species:6239 "Caenorhabditis elegans" [GO:0015031 "protein
transport" evidence=NAS] [GO:0051028 "mRNA transport" evidence=NAS]
[GO:0005643 "nuclear pore" evidence=NAS] [GO:0030719 "P granule
organization" evidence=IMP] [GO:0043186 "P granule" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 GO:GO:0009792 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0015031 GO:GO:0031965
GO:GO:0005643 GO:GO:0003723 GO:GO:0040039 GO:GO:0030719
GO:GO:0051028 GO:GO:0006997 GO:GO:0043186 InterPro:IPR025574
Pfam:PF13634 SUPFAM:SSF82215 GeneTree:ENSGT00550000074799
InterPro:IPR021967 Pfam:PF12110 EMBL:GU174496 EMBL:FO081350
RefSeq:NP_001254934.1 RefSeq:NP_498309.3 RefSeq:NP_498310.3
UniGene:Cel.17025 ProteinModelPortal:G5EEH9 SMR:G5EEH9
IntAct:G5EEH9 PRIDE:G5EEH9 EnsemblMetazoa:ZK328.5b GeneID:175852
KEGG:cel:CELE_ZK328.5 CTD:175852 WormBase:ZK328.5a
WormBase:ZK328.5b WormBase:ZK328.5c OMA:PTINEMK Uniprot:G5EEH9
Length = 1678
Score = 210 (79.0 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 58/155 (37%), Positives = 82/155 (52%)
Query: 44 LCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQIVK 103
L PDY++ P +N++ + +I G TVGR YG V + G +++ + LD+IV
Sbjct: 775 LTKPDYFSLPTINEM--KNMIKNGRVVLEDGLTVGRSSYGSVYWPGRVELKDVALDEIVV 832
Query: 104 FGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGDSDDFVKKM----KER 159
F E+ VY +E K GQ LN+ AEVTL + Y K K+ + D VK +E
Sbjct: 833 FRHREVTVYPNEEEKAPEGQELNRPAEVTLE-RVWYTDKKTKK-EVRDVVKLSEIGWREH 890
Query: 160 TERQ----GARFVSFDPVSGEWKFLVVHFSRFGLS 190
ERQ GA F F +G W F V HFS++GL+
Sbjct: 891 LERQTIRMGAAFKDFRAETGSWVFRVDHFSKYGLA 925
Score = 130 (50.8 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 53/244 (21%), Positives = 106/244 (43%)
Query: 715 SGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLAAVG--VI 772
+ + R DL L+ L ES+ S++ + + + +P DY + WH +L +VG +
Sbjct: 1382 AASNRGDLPGELIKLAC--ESQH-SVEVVLDCAAGE-NPNDYFLQWHVWSLLYSVGYRTM 1437
Query: 773 SSNDLQILDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREILFQYCESWSSE 832
S L SQL +A++V+ H+ DD ++T +R +L + ++
Sbjct: 1438 SKTSETRLHRNYSSQLEASSLSKYALFVLQHID--DDEE--RSTAVRSLLDRIAR-FTDN 1492
Query: 833 ESQRKFIEALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLF 892
+ E +PSEW+ +A + ++ E + N+ + +FV +A T
Sbjct: 1493 DMFDSISEQFDIPSEWIADAQFSIAKSVDDSTQLFELAVAAKNYLEICRLFVDDIAPTAV 1552
Query: 893 LSANHSDVWTLATSMESHKSEIENWDLGAGMYIVFY-----LIRSSLQEENNTMSDLVRI 947
++ +H + + +++I W GM Y LI + +EE + D++
Sbjct: 1553 VAGDHDALKAACAMVRPFENQIPEWG-ATGMVYTDYCRLINLIENDAEEE--LLQDVLES 1609
Query: 948 KKTQ 951
+T+
Sbjct: 1610 LETR 1613
Score = 93 (37.8 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 545 RRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACL 604
R E WL+ V +D S+ SN + + L G +D + ++A +LA +
Sbjct: 1226 RGEEIGEWLRTEAVKSVPDDRSADTSSNGVWNQLCL--G-DIDKAFQIAIDNNQPQLATM 1282
Query: 605 LSQAGGSTVSRSDIAH----QLDLWRVNGLDFKFIEKDRIRLYELLAGHIH--------- 651
L S V H QLD W+ I K+ ++ Y L++G H
Sbjct: 1283 LQT---SAVCPEATVHCFKAQLDNWK-KCETLHLIPKETLKCYVLMSGLSHYEWDQDGKN 1338
Query: 652 SSLNDVT-IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKA 695
S+N + ++W + LGL +WY L T L + YQ ++ G+A
Sbjct: 1339 HSINCLDGLNWIQALGLHVWY-LRAWTGLEESYDAYQKDVNAGRA 1382
Score = 75 (31.5 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 348 HETPVTGSHSHNIVDAGLFMGRAFRVGWGPNGILVHSGAP 387
H + G ++D G+ GR+ VGW G LV S P
Sbjct: 1084 HSAKMIGYGKSKLIDIGIVKGRSSHVGWSETGCLVWSAQP 1123
Score = 56 (24.8 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 29/131 (22%), Positives = 57/131 (43%)
Query: 407 IDKVVR-DENDKVRKELVDFSFDAPLNLHKELNHE-TEEVEVGSYKLKLQKVVSNSLMLS 464
+D++ R +ND + + FD P + + V+ + +L N L
Sbjct: 1483 LDRIARFTDNDMF--DSISEQFDIPSEWIADAQFSIAKSVDDSTQLFELAVAAKNYL--- 1537
Query: 465 EICRSYIDIIEAQLDVPG----VSSSTRLV--LMHQVMVWELIKVLFSERENGGQLRSEG 518
EICR ++D I V G + ++ +V +Q+ W +++++ L
Sbjct: 1538 EICRLFVDDIAPTAVVAGDHDALKAACAMVRPFENQIPEWGATGMVYTDYCRLINLIE-- 1595
Query: 519 DDNEEEMMQDI 529
+D EEE++QD+
Sbjct: 1596 NDAEEELLQDV 1606
Score = 47 (21.6 bits), Expect = 5.0e-28, Sum P(5) = 5.0e-28
Identities = 30/107 (28%), Positives = 44/107 (41%)
Query: 431 LNLH-KELNHETEEVEVGSYKLKL-QKVVSNSLMLSEICRSYIDIIEAQLDVPGVSSSTR 488
+N+H E + + + S K L V+ S S + YID+ +A G
Sbjct: 1150 VNVHVSETSRKGPSSQSNSVKSSLTSNFVTYSDSYSSMFAKYIDVAQAG----GYDG--- 1202
Query: 489 LVLMHQVMVWELIKVLFS-ERENGGQL-RSE--GDDNEEEMMQDIKD 531
H V VW+LI LF ER G R E G+ E ++ + D
Sbjct: 1203 ----H-VSVWKLISALFPYERREGWSFERGEEIGEWLRTEAVKSVPD 1244
Score = 43 (20.2 bits), Expect = 8.9e-08, Sum P(4) = 8.9e-08
Identities = 23/104 (22%), Positives = 49/104 (47%)
Query: 336 KLKSDGFKLDLKHETPVTGSHSHNI-VDAGLFMGRAFRVGWGPNGILVHSGAPV-GSNSR 393
KL G++ L+ +T G+ + + G ++ FRV L P+ GS +
Sbjct: 881 KLSEIGWREHLERQTIRMGAAFKDFRAETGSWV---FRVDHFSKYGLADDDEPMDGSPPQ 937
Query: 394 GVISSVINVEKVAIDKVVRDENDKVRKELVDFSFDAPLNLHKEL 437
+ + ++ + ++ RD N++V+++ V + DA H+E+
Sbjct: 938 QALQASSPLQVIDMNTSARDVNNQVQRKKVHKATDAH---HQEI 978
Score = 39 (18.8 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 20/97 (20%), Positives = 38/97 (39%)
Query: 283 PLQNTAQRMSQRSSSPLARKTPVGLLEY---HPGNSDSDSPGMILMAQQ------NKGMP 333
P+Q QR + R+ P + E+ P ++ + S ++ N
Sbjct: 713 PVQAVIQRHNDRNRDPPSLNLDTTCDEHTGLEPVSAATSSAASVVSTPSEETVNVNSAAG 772
Query: 334 LKKLKSDGFKLDLKHETPVTGSHSHNIVDAGLFMGRA 370
+K K D F L +E + +++ GL +GR+
Sbjct: 773 VKLTKPDYFSLPTINEMKNMIKNGRVVLEDGLTVGRS 809
>POMBASE|SPAC1486.05 [details] [associations]
symbol:nup189 "nucleoporin Nup98 and Nup96" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005643 "nuclear pore" evidence=IDA] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=ISM] [GO:0015031 "protein transport" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IDA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 PomBase:SPAC1486.05
EMBL:CU329670 GO:GO:0051301 GenomeReviews:CU329670_GR GO:GO:0015031
GO:GO:0031965 eggNOG:NOG12793 GO:GO:0008233 GO:GO:0051028
GO:GO:0006997 GO:GO:0031080 GO:GO:0006407 OrthoDB:EOG4P2T9R
InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215 KO:K14297
InterPro:IPR021967 Pfam:PF12110 EMBL:D89145 PIR:T42421 PIR:T50074
RefSeq:NP_594093.1 ProteinModelPortal:Q9UTK4 IntAct:Q9UTK4
STRING:Q9UTK4 MEROPS:S59.A07 EnsemblFungi:SPAC1486.05.1
GeneID:2541547 KEGG:spo:SPAC1486.05 OMA:DYNQGRR NextBio:20802644
Uniprot:Q9UTK4
Length = 1778
Score = 231 (86.4 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 106/465 (22%), Positives = 188/465 (40%)
Query: 493 HQVMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLEALPLIRRAEFSCW 552
++ +VW+L +LF + L SE E++ L+R + S W
Sbjct: 1268 YESIVWDLTSILFDPKNYS--LPSELSSEAREVLYQ-------------KLVRES-LSEW 1311
Query: 553 LKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGST 612
+ +++ H + S + I++LLTG + + E A + RL+ L+
Sbjct: 1312 ITKTLEHETTTLAKEAETSE--ERIYILLTGNLIGQACEEAVQSQNNRLSTLIPLVNSDV 1369
Query: 613 VSRSDIAHQLDLWRVNGLDFKFIEKDRIRLYELLAGHIH-----SSLND--------VT- 658
+ ++ QL+ WR +G D FI K ++ELL+G+ + D +T
Sbjct: 1370 DIQQEVKQQLEEWRKHG-DLPFINKFTRLIFELLSGNTDIAEGCGTKGDEDYVQSIPITK 1428
Query: 659 -IDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKAPLPVPIYVDEGPIDEPIDWSGN 717
+ W R GL +WY + S+ Q Y L K P + + PI G
Sbjct: 1429 NMTWLRAFGLKLWYNT--DISIGEAMQLYVESLQ--KFP-----EIMQKPIATSAV-QGI 1478
Query: 718 ERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREVLA---------- 767
E D+ Y L+ +A G S L+ + S+ PL+Y ++W L+
Sbjct: 1479 EVYDIIYLLLKAYAMGTS----LEELTIPESAKCSPLNYRVVWQLAIYLSKARSLCDFSD 1534
Query: 768 -AVGVISSNDLQI-------LDMGLVSQLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIR 819
V + + DL+ L + SQL G+ W+++V+LH+ + + + I
Sbjct: 1535 RVVDINMAEDLKPISVHSDQLTLAYASQLEASGQWLWSLFVLLHLENVET----RTSTIT 1590
Query: 820 EILFQYCESWSSEESQRKFIEALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKA 879
L + + + IE L +P WL+EA A+Y Y G+ L E A ++ A
Sbjct: 1591 SCLARNLRGGLGAGAV-EMIEKLCIPESWLNEAKALYARYVGDHLNELYFLQEAALYEDA 1649
Query: 880 HSIFVTSVAHTLFLSANHSDVWTLATSMESHKSEIENWDLGAGMY 924
H + + ++A +S N + + + +W G +Y
Sbjct: 1650 HKVLLDTLAPQAVISGNKTQLKKALEGFNGQTDGLASWRFGGQIY 1694
Score = 174 (66.3 bits), Expect = 2.7e-27, Sum P(2) = 2.7e-27
Identities = 52/157 (33%), Positives = 79/157 (50%)
Query: 43 VLCSPDYYTEPLLNDLGK--REVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLD-LD 99
V+ S DY+ +P + +L K +E + V F+VGR GYG V FL D+ + L+
Sbjct: 790 VVLSDDYWMKPSIEELSKYPKEKL-----CSVHQFSVGRTGYGQVAFLKPVDLSGFEKLE 844
Query: 100 QI----VKFGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGDSDDF 152
I V F R VY E S P +G+GLN A +TL + R +K+ + +
Sbjct: 845 DIPGKVVVFERKICAVYPVEGSSPPLGEGLNVPAIITLEKTWPLSRETREPIKDPQNPRY 904
Query: 153 VKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGL 189
++ +K + F+ F+ G+W F V HFSR+GL
Sbjct: 905 IQHVKRLHRIKDTEFIDFN--DGKWIFKVQHFSRYGL 939
Score = 42 (19.8 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 145 KEGDSDDFVKKMKERTERQGARFVSFDPVSGEWKFLVVHFSRFGLSXXXXXXXXXXXATP 204
+ GD DD KK+ E +S + V G K V S LS +
Sbjct: 1028 ERGDYDDNAKKVDE--------VISIEKVDGYSKENNVPLSEDDLSNSSESSNESVYSLV 1079
Query: 205 VQN--SLEMNGGEVSDVDEETQMD 226
++ SL + ++ D+ EE+ +
Sbjct: 1080 EESDASLAADNMDIEDISEESDRE 1103
Score = 38 (18.4 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 315 SDSDSPGMILMAQQNKGMPLKKLKSDGFKLDLKHETPVTGSHSHNIVDAGLFMGRAFRVG 374
S+S++PG L QN + GF + P+ GS+++ GLF R
Sbjct: 30 SNSNTPGNTLFGSQNTS-------TTGFGQNTTQ--PLFGSNTNG----GLFGNRNNTTT 76
Query: 375 WGPNGILVHSG 385
G G + SG
Sbjct: 77 TGGTGFGMSSG 87
>ASPGD|ASPL0000029682 [details] [associations]
symbol:sonB species:162425 "Emericella nidulans"
[GO:0034399 "nuclear periphery" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0005816 "spindle pole body" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031080 "nuclear pore outer ring" evidence=IEA]
[GO:0006997 "nucleus organization" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] InterPro:IPR007230 Pfam:PF04096
PROSITE:PS51434 GO:GO:0006810 GO:GO:0005643 EMBL:AACD01000098
EMBL:BN001305 InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215
KO:K14297 InterPro:IPR021967 Pfam:PF12110 OMA:DYNQGRR
RefSeq:XP_663231.1 ProteinModelPortal:G5EB32
EnsemblFungi:CADANIAT00003443 GeneID:2871918 KEGG:ani:AN5627.2
HOGENOM:HOG000191109 Uniprot:G5EB32
Length = 1962
Score = 154 (59.3 bits), Expect = 2.7e-23, Sum P(5) = 2.7e-23
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 13 NIPQYRKRNISMNAYSLSCEIS-SENGDSLPVLCSPDYYTEPLLNDLGKREVIDPGYSSR 71
++P+ R S + + +S S +GD P +Y+ +P +L K + R
Sbjct: 863 SVPEDNGRVSSASPGENASRLSFSPSGDPQP----GEYWMKPTRAELSK---LSRDQLKR 915
Query: 72 VPDFTVGRLGYGYVKFLGNTDVRWLDLDQI----VKFGRHEIVVYEDESSKPEVGQGLNK 127
TVGR G V F D+ +DLD I V G +I VY DES KP G+GLN
Sbjct: 916 FTGLTVGRERCGSVTFDDPVDLTTIDLDNILGGLVDIGVRKITVYPDESIKPARGKGLNV 975
Query: 128 AAEVTLFLQGRYLSLKLKEGDSDD-----FVKKMKERTERQGARFVSFDPVSGEWKFLVV 182
+ TL ++ + + K+G S F K + + FV+++ +G W F V
Sbjct: 976 PS--TLRIENSWPRGRDKKGPSPVTSGPLFEKHIDRLMKVHNTEFVNYETETGTWVFRVA 1033
Query: 183 HFSRFGL 189
H++ +GL
Sbjct: 1034 HYTTYGL 1040
Score = 139 (54.0 bits), Expect = 2.7e-23, Sum P(5) = 2.7e-23
Identities = 64/267 (23%), Positives = 116/267 (43%)
Query: 696 PLPVPIYVDEGPIDEPIDWSGNERND---LSYYLMLLHASGESKFGSLKTMFNAL---SS 749
PLP D G D G+E L Y + L A+ + +L T+ AL S
Sbjct: 1619 PLPPHQDKDRGVWHTSTDNMGHESPLWVLLKAYAVTLGAAKGTGVPTL-TLPAALLPESV 1677
Query: 750 TYDPLDYHMIWHQREVLAAV-GVISSNDLQILDMG-LVSQL---LC-QGKCHWAIYVVLH 803
T D L + + +VL+AV G ++ I M LV LC G ++V+LH
Sbjct: 1678 TGDKLSNRLSFQLCQVLSAVLGQYERLEIDIAQMDQLVWDYAWELCASGNLAQVLFVLLH 1737
Query: 804 MPRCDDYPY-LQATLIR---EILFQYCESWSSEESQRKFIEALGVPSEWLHEAMAVYYNY 859
+ R D ++ L R E+ S + + ++ L +P W+ + A+Y
Sbjct: 1738 LSRASDRERAVKEVLARFAAELPEPITPEGSPDATWQQLTSDLQIPENWIWMSKALYARN 1797
Query: 860 YGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSANHSDVWTLATSM-ESHKSEIENWD 918
G+ ++ ++ + NW AH+ F V T + ++ + TL + E+ + +++ W
Sbjct: 1798 IGDAAREVDCLVRGKNWNDAHATFCRIVGPTAVIEHDYKTLETLLSGFGETPEQKVQGWA 1857
Query: 919 LGAGMYIVFYLIRSSLQEENNTMSDLV 945
G G+Y F + ++ ++ ++ LV
Sbjct: 1858 SGGGVYEDFLRLITARGQDPQRLNRLV 1884
Score = 118 (46.6 bits), Expect = 2.7e-23, Sum P(5) = 2.7e-23
Identities = 51/199 (25%), Positives = 89/199 (44%)
Query: 519 DDNEEEMMQDIKDGPPEFDLEALPLIRRAEF-SCW---LKESVCHRVQEDVSSLDESNYL 574
DD E++ + PP+ + L I++ W ++E H V + S +E
Sbjct: 1428 DDIEDDFSASV---PPQLRQKYLHRIKKDRLIRLWEGIVRERNAHAVSK-AGSAEECA-- 1481
Query: 575 KHIFLLLTGRQLDSSVELAASRGDVRLACLLSQAGGSTVSRSDIAHQLDLWRVNGLDFKF 634
++LL + R ++ L +S+ + LA L+SQ G ++ D+A Q+ WR + + +
Sbjct: 1482 --VYLLCSHRIEEACTVLISSQ-NFHLATLVSQIGRDQTTQRDMAQQIKEWREHNVWSEM 1538
Query: 635 IEKDRIRLYELLAGH-IHS------SLND----------VTIDWKRFLGLLMWYQLPPET 677
E R LYELLAG+ + S +L D +DW + GL +WY + +
Sbjct: 1539 SEPIRA-LYELLAGNALRSEGKSGGALEDRASTFTFSERFELDWFQAFGLRLWYGITDDE 1597
Query: 678 SLAIVFQTYQHLLDDGKAP 696
L + + L G+ P
Sbjct: 1598 PLEVAVSAFAQDLKSGEEP 1616
Score = 67 (28.6 bits), Expect = 2.7e-23, Sum P(5) = 2.7e-23
Identities = 38/198 (19%), Positives = 81/198 (40%)
Query: 210 EMNGGEVSDVDEETQMDLSG--PELSHSLPAH--LGLDPIKMKEMRMVMFQEEEEID-DF 264
+ +G ++DE +MD++G P L ++ +DP + + + + + D
Sbjct: 1147 QQSGESELELDEGEEMDMAGTFPNLDRTVEHDDDEDMDP-EFNQPSLKPWNTPSKARLDL 1205
Query: 265 SGTPSRQ-QWSLG-KEYIRPPLQNT-AQRMSQRSSSPLARKTPVGLLEYHPGNSDSDSPG 321
SG + Q Q ++ ++ R L+ A S+R + P + N+ D
Sbjct: 1206 SGDWAEQLQRTISPRKQNRDALREIQANAFSERPLNDDTPTKPAATAQRKGFNTSIDLMN 1265
Query: 322 MILMAQQNKGMP-LKKLK----SDGFKLDLKHETPVTGSHSHNIVDAGLFMGRAFRVGWG 376
+ + +G P L++ K + GF+ + S+ + L +F+ WG
Sbjct: 1266 SLFQQPRKQGQPPLRQQKPQQKAGGFEWPYNKQPKTFAGESNEMSKDDLDFHHSFKPRWG 1325
Query: 377 PNGILVHSGAPVGSNSRG 394
P +L+ + +G++ G
Sbjct: 1326 PVDLLICAKTGMGNHQYG 1343
Score = 49 (22.3 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 39/169 (23%), Positives = 67/169 (39%)
Query: 377 PNGILVHSGAPVGSNSRGV--ISSVINVEKVAIDKVVRDENDKV---RKELVDFSFDAPL 431
P+ + + + P G + +G ++S EK ID++++ N + E + F
Sbjct: 976 PSTLRIENSWPRGRDKKGPSPVTSGPLFEK-HIDRLMKVHNTEFVNYETETGTWVFRVAH 1034
Query: 432 NLHKELNHETEEVEVGSYKLKLQKVVSNSLMLSEICRSY-IDIIEAQLDVPGVSSSTRLV 490
L+++ EE E S+ + + SE +Y ID A V GV T
Sbjct: 1035 YTTYGLDYDDEEEEGESHNQSTLPADRDLTVGSEQMSTYSIDDSFAS-SVGGVDDDT-FD 1092
Query: 491 LMHQVMVWELIKVLFSERENGGQLRSEGDDNEEEMMQDIKDGPPEFDLE 539
+ MV E ++ SE DD +E +++ G E D E
Sbjct: 1093 FKKRKMVPGAFGAQAMETVEEREIGSENDDEDESFLEEGSTGSTEQDGE 1141
Score = 48 (22.0 bits), Expect = 1.4e-11, Sum P(4) = 1.4e-11
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 264 FSGTPSRQQWSLGKEYIRPPLQNTAQRMSQRSSSPLARKTP 304
FSG P+ S G + PL ++A + QR+ P+ + TP
Sbjct: 621 FSGLPAPNTASPGP--LATPL-SSANKQKQRAPLPIYKITP 658
Score = 39 (18.8 bits), Expect = 4.8e-06, Sum P(4) = 4.8e-06
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 562 QEDVSSLDESNYLKHIFLLLTG-RQLDSSVELA 593
QEDV +++ S LK L LTG +L + E++
Sbjct: 1921 QEDVKAMEMSRVLK---LPLTGDARLVQTAEMS 1950
Score = 37 (18.1 bits), Expect = 2.7e-23, Sum P(5) = 2.7e-23
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 496 MVWELIKVLFSE 507
+VW+L +LF++
Sbjct: 1417 VVWQLANILFND 1428
>UNIPROTKB|G4MSW8 [details] [associations]
symbol:MGG_04617 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
GO:GO:0006810 GO:GO:0005643 EMBL:CM001232 InterPro:IPR025574
Pfam:PF13634 SUPFAM:SSF82215 KO:K14297 InterPro:IPR021967
Pfam:PF12110 RefSeq:XP_003713629.1 ProteinModelPortal:G4MSW8
EnsemblFungi:MGG_04617T0 GeneID:2677933 KEGG:mgr:MGG_04617
Uniprot:G4MSW8
Length = 1906
Score = 184 (69.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 58/199 (29%), Positives = 91/199 (45%)
Query: 34 SSENG-DSLPVLCSPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTD 92
S+ NG DS + DY+ P D+ + +V DFTVGR G G V+F D
Sbjct: 890 SASNGVDS----ATSDYWMSPSKEDIQNMNRVQ---RQKVTDFTVGRHGIGNVRFRVPVD 942
Query: 93 VRWLDLDQI----VKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRYLSLKLKEGD 148
+ ++LD+I V+F VY + + KP +G+GLN AE+TL + + + K G
Sbjct: 943 LSNINLDEIFVELVQFSPRSCTVYPNPAKKPAMGKGLNVPAEITL--ENSWPRGREKPGS 1000
Query: 149 SDDFVKKMKERTER-QGARFVSFDPVSGEWKFLVVHFSRFGLSXXXXXXXXXXXATPVQN 207
+K ER +R FV ++ +G W F V HF+ +GL + Q+
Sbjct: 1001 RGH--QKHIERLKRIPDTEFVDYNAETGVWVFRVEHFTTYGLDDDDEDDDTEMNQSEAQS 1058
Query: 208 SLEMNGGEVSDVDEETQMD 226
++ + E+ MD
Sbjct: 1059 GFQVRPRQ-GQASEQASMD 1076
Score = 165 (63.1 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 78/344 (22%), Positives = 148/344 (43%)
Query: 543 LIRRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLA 602
L+RR + S + + V + V++ + S + FL L G Q+ + + + +LA
Sbjct: 1439 LLRRRKLSEFWQRLVQDKTS--VATAEASRSDEKAFLSLAGHQVADACKHLIDAKNFKLA 1496
Query: 603 CLLSQAGGSTVSRSDIAHQLDLWR----VNGLD------FKFIEKDRIRLYELLAG---- 648
L S G S +R D+A Q+ +W ++ ++ + + D + + E G
Sbjct: 1497 TLTSMVGTSDKAREDMAEQVQVWHDGDVLSEIESPLRAIYGLLAGD-VAVCEGKTGAGSE 1555
Query: 649 -HIHSSL--NDVTIDWKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKAPLPVPIYVDE 705
+ + + N +DW++ GL +WY + ++ + + G P P P Y+DE
Sbjct: 1556 NRLDTLILSNQFGLDWQQSFGLRLWYGISTGDDISKAIEKADEDMGKGLIPEPKPWYLDE 1615
Query: 706 GPIDEPIDWSGNERNDLSYYLMLLHASGESKFGSLKTMFNALSSTYDPLDYHMIWHQREV 765
++ + S N + DL + L+ L+A G K L+ + S + DY + W ++
Sbjct: 1616 AAREDKEN-SENTQ-DLMWGLLKLYA-GRVK---LEDVLRPESCSPSHTDYSLCWQLGQL 1669
Query: 766 LAAVGVISSNDLQILDMGLVS---QLLCQGKCHWAIYVVLHMPRCDDYPYLQATLIREIL 822
L+ G S D VS QL+ A+ V+LH+ +I +
Sbjct: 1670 LSVSGKTSFESRAKADSLTVSYGAQLMENMNWSQAVTVLLHLSDRTSRAKAVRDVIARVA 1729
Query: 823 FQYCESW--SSEESQRKF-----IEALGVPSEWLHEAMAVYYNY 859
++ + +SE++Q+ +E +P W+ EA A+ Y Y
Sbjct: 1730 MEFANTPYNASEQNQQGVKQLLELEQYHIPKAWIAEACALSYRY 1773
Score = 59 (25.8 bits), Expect = 4.8e-22, Sum P(3) = 4.8e-22
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 479 DVPGVSSSTRLVLMHQVMVWELIKVLFSERENGG-QL--RSEGDDNEEEMMQD 528
D+ SST ++V+VWEL +LF E QL R + + + ++QD
Sbjct: 1403 DIVNDLSSTASATSYEVLVWELASILFDPIEGSNVQLLRRRKLSEFWQRLVQD 1455
Score = 52 (23.4 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 30/122 (24%), Positives = 49/122 (40%)
Query: 353 TGSHSHNIVDAGLFMGRAFRVGWGPN-GILVHSGAPVGSNSRGVISSVINVEKVAIDKVV 411
TG+ S N +D L + F + W + G+ + G G + IS AI+K
Sbjct: 1550 TGAGSENRLDT-LILSNQFGLDWQQSFGLRLWYGISTGDD----ISK-------AIEKAD 1597
Query: 412 RDENDKVRKELVDFSFDAPLNLHKELNHETEEVEVGSYKLKLQKVVSNSLMLSEICR-SY 470
D + E + D KE + T+++ G KL +V ++ E C S+
Sbjct: 1598 EDMGKGLIPEPKPWYLDEAAREDKENSENTQDLMWGLLKLYAGRVKLEDVLRPESCSPSH 1657
Query: 471 ID 472
D
Sbjct: 1658 TD 1659
Score = 42 (19.8 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 14/63 (22%), Positives = 30/63 (47%)
Query: 288 AQRMSQRSSSPLARKTPVGLLEYHPGNSDSDSPGMILMAQQ-NKGMPLKKLKSDGFKLDL 346
A++ + ++ + R P+ +L++HP D + L A+ N G+ + + G D
Sbjct: 1799 AEQAQELQTAVVRRLDPLAILQWHP-ERDLERLVQYLRARPVNDGLADIAVLASGKGQDT 1857
Query: 347 KHE 349
K +
Sbjct: 1858 KRQ 1860
Score = 41 (19.5 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 463 LSEICRSYIDIIEAQL----DVPGVSSSTRLVLMHQVMVWELIKVLFSEREN 510
+++ C+ ID +L + G S R + QV VW VL SE E+
Sbjct: 1480 VADACKHLIDAKNFKLATLTSMVGTSDKAREDMAEQVQVWHDGDVL-SEIES 1530
Score = 38 (18.4 bits), Expect = 4.0e-07, Sum P(3) = 4.0e-07
Identities = 15/61 (24%), Positives = 25/61 (40%)
Query: 233 SHSLPAHLGLDPIKMKEMRMVMFQEEEEIDDFSGTPSRQQWSLGKEYIRPPLQNTAQRMS 292
SHS A G + ++K + + EEE S + S +Y P + Q M+
Sbjct: 858 SHSSTADAGPEMEQVKGNELAIVHEEESPQRTSASNGVD--SATSDYWMSPSKEDIQNMN 915
Query: 293 Q 293
+
Sbjct: 916 R 916
Score = 37 (18.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 205 VQNSLEMNGGEVSDVDEETQMDLSGPELSHSLPAHLGLDPIKMKEMRMVMFQEEEEIDDF 264
VQ+ + E S DE+ + L+G +++ + + K+ + ++ ++ +D
Sbjct: 1453 VQDKTSVATAEASRSDEKAFLSLAGHQVADACKHLIDAKNFKLATLTSMVGTSDKAREDM 1512
Query: 265 SGTPSRQQWSLGK--EYIRPPLQ 285
+ Q W G I PL+
Sbjct: 1513 A--EQVQVWHDGDVLSEIESPLR 1533
>SGD|S000003060 [details] [associations]
symbol:NUP145 "Essential protein with distinct roles in two
nuclear pore subcomplexes" species:4932 "Saccharomyces cerevisiae"
[GO:0034398 "telomere tethering at nuclear periphery" evidence=IMP]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0031080
"nuclear pore outer ring" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IGI]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IMP]
[GO:0031081 "nuclear pore distribution" evidence=IMP] [GO:0003723
"RNA binding" evidence=IEA;IDA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0006409 "tRNA export from nucleus" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0000973 "posttranscriptional tethering of RNA polymerase II
gene DNA at nuclear periphery" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IGI;IPI]
[GO:0006606 "protein import into nucleus" evidence=IGI] [GO:0036228
"protein targeting to nuclear inner membrane" evidence=IGI]
[GO:0044613 "nuclear pore central transport channel" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=IMP] [GO:0035392
"maintenance of chromatin silencing at telomere" evidence=IMP]
InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434 SGD:S000003060
GO:GO:0045893 EMBL:BK006941 GO:GO:0031965 GO:GO:0003723
GO:GO:0016787 GO:GO:0006302 eggNOG:NOG12793 GO:GO:0006607
TCDB:9.A.14.1.1 GO:GO:0006409 GO:GO:0016973 GO:GO:0031080
GO:GO:0031081 GO:GO:0000973 GO:GO:0036228 GO:GO:0017056
GO:GO:0034398 GO:GO:0044613 GO:GO:0005487 InterPro:IPR025574
Pfam:PF13634 SUPFAM:SSF82215 GO:GO:0035392 EMBL:X76557 EMBL:Z32672
EMBL:Z72614 PIR:A54831 RefSeq:NP_011423.1 PDB:3BG0 PDB:3BG1
PDB:3IKO PDB:3KEP PDB:3KES PDBsum:3BG0 PDBsum:3BG1 PDBsum:3IKO
PDBsum:3KEP PDBsum:3KES ProteinModelPortal:P49687 SMR:P49687
DIP:DIP-2074N IntAct:P49687 MINT:MINT-508825 STRING:P49687
PaxDb:P49687 DNASU:852788 EnsemblFungi:YGL092W GeneID:852788
KEGG:sce:YGL092W CYGD:YGL092w GeneTree:ENSGT00550000074799
HOGENOM:HOG000113874 OMA:MEFISYN OrthoDB:EOG40ZV63
EvolutionaryTrace:P49687 NextBio:972282 PMAP-CutDB:P49687
Genevestigator:P49687 GermOnline:YGL092W InterPro:IPR021967
Pfam:PF12110 Uniprot:P49687
Length = 1317
Score = 141 (54.7 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 46/133 (34%), Positives = 68/133 (51%)
Query: 72 VPDFTVGRLGYGYVKFLGNTDVRWLD-------LDQIVKFGRHEIV-VYEDESSKPEVGQ 123
V +F +GR GYG + F + D+ +IV F + V VY DE++KP +G
Sbjct: 481 VSNFVIGRRGYGCITFQHDVDLTAFTKSFREELFGKIVIFRSSKTVEVYPDEATKPMIGH 540
Query: 124 GLNKAAEVTLFLQGRY-LSLKLKEGDSD-----DF-VKKMKERTERQGARFVSFDPVSGE 176
GLN A +TL + Y + K K+ D +F V K R+ R+ ++S++P G
Sbjct: 541 GLNVPAIITL--ENVYPVDKKTKKPMKDTTKFAEFQVFDRKLRSMRE-MNYISYNPFGGT 597
Query: 177 WKFLVVHFSRFGL 189
W F V HFS +GL
Sbjct: 598 WTFKVNHFSIWGL 610
Score = 109 (43.4 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 545 RRAEFSCWLKESVCHRVQEDVSSLDESNYLKHIFLLLTGRQLDSSVELAASRGDVRLACL 604
R + W+ + ++E + + SN ++ IFL L + + +LA + L+ L
Sbjct: 870 RHCRLTSWIVSQIGPEIEEKIRN--SSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVL 927
Query: 605 LSQAGGSTVSRSDIAH-QLDLWRVNGLDFKFIEKDRIRLYELLAGHIHS---SLNDVTID 660
+S G + D+A QL W G I+K+ ++Y+LL+G SL ++ +
Sbjct: 928 ISYLGSNDPRIRDLAELQLQKWSTGGCS---IDKNISKIYKLLSGSPFEGLFSLKELESE 984
Query: 661 --WKRFLGLLMWYQLPPETSLAIVFQTYQHLLDDGKAPLPVPIYV 703
W L L + Y E SL + Q++ LD P PI V
Sbjct: 985 FSWLCLLNLTLCYGQIDEYSLESLVQSH---LDKFSLPYDDPIGV 1026
Score = 82 (33.9 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 26/111 (23%), Positives = 51/111 (45%)
Query: 839 IEALGVPSEWLHEAMAVYYNYYGELSKALEHFLECANWQKAHSIFVTSVAHTLFLSAN-- 896
+ L +PS+ + A A+ Y G +++ L +++ A VTS+ L LS N
Sbjct: 1133 LNRLKIPSQLIFNAQALKDRYEGNYLSEVQNLLLGSSYDLAEMAIVTSLGPRLLLSNNPV 1192
Query: 897 -HSDVWTLATSM-ESHKSEIENWDLGAGMYIVFYLIRSSLQEENNTMSDLV 945
++++ TL + E SE + W + ++ V+ + E T+ L+
Sbjct: 1193 QNNELKTLREILNEFPDSERDKWSVSINVFEVYLKLVLDNVETQETIDSLI 1243
Score = 54 (24.1 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 22/55 (40%), Positives = 28/55 (50%)
Query: 706 GP-IDEPIDWSGNERNDLSYYLML---LHASG---ESKFGSLKTMFNALSSTYDP 753
GP I+E I S NE + YL+L + AS ESK G L + + L S DP
Sbjct: 883 GPEIEEKIRNSSNEIEQIFLYLLLNDVVRASKLAIESKNGHLSVLISYLGSN-DP 936
Score = 50 (22.7 bits), Expect = 4.1e-15, Sum P(4) = 4.1e-15
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 29 LSCEISSENGDSLP-VLCSPDYYTEPLLNDLGKREVIDPGYSSRV 72
LS + + + P + SP Y ++P LN G ++D +SS++
Sbjct: 296 LSTRLKATQKSTSPNEIFSPSY-SKPWLNGAGSAPLVDDFFSSKM 339
Score = 46 (21.3 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 12/49 (24%), Positives = 24/49 (48%)
Query: 907 MESHKSEIENWDLGAGMYIVFYLIRSSLQEENNTMSDLVRIKKTQHCEI 955
ME S+ W L + I+F + + +N+ + + +KK +HC +
Sbjct: 830 MEKTSSDYNLWKLSS---ILFDPVSYPYKTDNDQVK-MALLKKERHCRL 874
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 570 ESNYLKHIFLLLTGRQLD-SSVELAASRG 597
E NYL + LL G D + + + S G
Sbjct: 1154 EGNYLSEVQNLLLGSSYDLAEMAIVTSLG 1182
>CGD|CAL0005513 [details] [associations]
symbol:orf19.7433 species:5476 "Candida albicans" [GO:0044613
"nuclear pore central transport channel" evidence=IEA] [GO:0044614
"nuclear pore cytoplasmic filaments" evidence=IEA] [GO:0000055
"ribosomal large subunit export from nucleus" evidence=IEA]
[GO:0016973 "poly(A)+ mRNA export from nucleus" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IEA] [GO:0006606
"protein import into nucleus" evidence=IEA] [GO:0006409 "tRNA
export from nucleus" evidence=IEA] [GO:0005487 "nucleocytoplasmic
transporter activity" evidence=IEA] [GO:0017056 "structural
constituent of nuclear pore" evidence=IEA] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 CGD:CAL0005513 GO:GO:0006810
GO:GO:0005643 EMBL:AACQ01000074 eggNOG:NOG12793
HOGENOM:HOG000093958 InterPro:IPR025574 Pfam:PF13634
SUPFAM:SSF82215 KO:K14297 RefSeq:XP_716094.1
ProteinModelPortal:Q5A2Y2 STRING:Q5A2Y2 GeneID:3642281
KEGG:cal:CaO19.7433 Uniprot:Q5A2Y2
Length = 1096
Score = 161 (61.7 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 49/146 (33%), Positives = 76/146 (52%)
Query: 46 SPDYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWL-DLDQI--- 101
S Y+ P L +L K+ +++ +P F +GR YG ++FL D+ + +LD I
Sbjct: 953 SEGYWMSPSLQELKKKSLLE---LKSIPKFKIGRKHYGELEFLEPVDLTSIVNLDDIAGN 1009
Query: 102 -VKFGRHEIVVYEDESSKPEVGQGLNKAAEVTLFLQGRY---LSLKLKEGD-SDDFVKKM 156
V F VVY D++ KP+ G+GLN A +TL +G Y + KL D + VK+
Sbjct: 1010 LVTFSNKTCVVYPDDN-KPKPGEGLNLPARITL--EGCYPINKADKLPILDPKSEIVKRH 1066
Query: 157 KERTER-QGARFVSFDPVSGEWKFLV 181
E + +F+S+DP +G W F V
Sbjct: 1067 IENLKTIPEMKFISYDPTNGHWTFEV 1092
>SGD|S000001551 [details] [associations]
symbol:NUP100 "FG-nucleoporin component of central core of
the nuclear pore complex" species:4932 "Saccharomyces cerevisiae"
[GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;IDA;IPI] [GO:0000973 "posttranscriptional tethering of
RNA polymerase II gene DNA at nuclear periphery" evidence=IMP]
[GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IGI;IPI] [GO:0031990 "mRNA export from nucleus in response
to heat stress" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IEA;IDA] [GO:0006406 "mRNA export from nucleus"
evidence=IPI] [GO:0036228 "protein targeting to nuclear inner
membrane" evidence=IGI] [GO:0044613 "nuclear pore central transport
channel" evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0016021 "integral to membrane"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IGI]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] InterPro:IPR007230 Pfam:PF04096 PROSITE:PS51434
SGD:S000001551 GO:GO:0045893 GO:GO:0031965 EMBL:BK006944
eggNOG:NOG12793 GO:GO:0031990 GO:GO:0006607 TCDB:9.A.14.1.1
EMBL:X75780 GO:GO:0000973 GO:GO:0036228 GO:GO:0017056 GO:GO:0044613
GO:GO:0005487 EMBL:Z15035 EMBL:Z28068 PIR:B44402 RefSeq:NP_012855.1
ProteinModelPortal:Q02629 SMR:Q02629 DIP:DIP-2351N IntAct:Q02629
MINT:MINT-519762 STRING:Q02629 PaxDb:Q02629 PeptideAtlas:Q02629
DNASU:853796 EnsemblFungi:YKL068W GeneID:853796 KEGG:sce:YKL068W
CYGD:YKL068w GeneTree:ENSGT00700000104281 HOGENOM:HOG000093958
OMA:QGSGMGS OrthoDB:EOG4P2T9R NextBio:974937 Genevestigator:Q02629
GermOnline:YKL068W InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215
Uniprot:Q02629
Length = 959
Score = 144 (55.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 40/143 (27%), Positives = 67/143 (46%)
Query: 48 DYYTEPLLNDLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLD----QIVK 103
+YY P + LG + +I+ ++ + +G YG V+FL D+ LD +V
Sbjct: 816 NYYISPSIETLGNKSLIE---LRKINNLVIGHRNYGKVEFLEPVDLLNTPLDTLCGDLVT 872
Query: 104 FGRHEIVVYEDESSKPEVGQGLNKAAEVTL---FLQGRYLSLKLKEGDSDDFVKKMKERT 160
FG +YE+ S KPE G+G+N VTL F + +K + + +
Sbjct: 873 FGPKSCSIYENCSIKPEKGEGINVRCRVTLYSCFPIDKETRKPIKNITHPLLKRSIAKLK 932
Query: 161 ERQGARFVSFDPVSGEWKFLVVH 183
E +F S+DPV+G + + + H
Sbjct: 933 ENPVYKFESYDPVTGTYSYTIDH 955
>SGD|S000004650 [details] [associations]
symbol:NUP116 "FG-nucleoporin component of central core of
the nuclear pore complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005487 "nucleocytoplasmic transporter activity"
evidence=IGI;IPI] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0017056 "structural constituent of nuclear pore"
evidence=IMP;IPI] [GO:0005643 "nuclear pore" evidence=IEA;IDA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IMP] [GO:0006406 "mRNA export from nucleus" evidence=IPI]
[GO:0044613 "nuclear pore central transport channel" evidence=IDA]
[GO:0044614 "nuclear pore cytoplasmic filaments" evidence=IDA]
[GO:0006409 "tRNA export from nucleus" evidence=IMP] [GO:0016021
"integral to membrane" evidence=ISM] [GO:0006810 "transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IMP] [GO:0006606 "protein
import into nucleus" evidence=IMP] [GO:0016973 "poly(A)+ mRNA
export from nucleus" evidence=IGI;IMP] InterPro:IPR007230
Pfam:PF04096 PROSITE:PS51434 SGD:S000004650 GO:GO:0031965
EMBL:BK006946 GO:GO:0006606 eggNOG:NOG12793 EMBL:Z48502
GO:GO:0000055 TCDB:9.A.14.1.1 GO:GO:0006409 GO:GO:0044614
GO:GO:0016973 GO:GO:0006999 GO:GO:0017056 GO:GO:0044613
GO:GO:0005487 GeneTree:ENSGT00700000104281 HOGENOM:HOG000093958
OrthoDB:EOG4P2T9R InterPro:IPR025574 Pfam:PF13634 SUPFAM:SSF82215
EMBL:Z15036 EMBL:X68108 PIR:S28925 RefSeq:NP_013762.1 PDB:2AIV
PDB:3PBP PDBsum:2AIV PDBsum:3PBP ProteinModelPortal:Q02630
SMR:Q02630 DIP:DIP-2389N IntAct:Q02630 MINT:MINT-441530
STRING:Q02630 PaxDb:Q02630 PeptideAtlas:Q02630 DNASU:855066
EnsemblFungi:YMR047C GeneID:855066 KEGG:sce:YMR047C CYGD:YMR047c
KO:K14297 OMA:SNSYGQH EvolutionaryTrace:Q02630 NextBio:978329
Genevestigator:Q02630 GermOnline:YMR047C Uniprot:Q02630
Length = 1113
Score = 133 (51.9 bits), Expect = 0.00013, P = 0.00013
Identities = 46/195 (23%), Positives = 88/195 (45%)
Query: 2 GLDARTFASCNNIPQYRKRNIS---MNAYSLSCE--ISSENGDSLPVLCSPDYYTEPLLN 56
G D+ T N+ + K N++ YS + + ++ + + +YY P L+
Sbjct: 918 GEDSATKHHSRNMDEENKENVADLQKQEYSEDDKKAVFADVAEKDASFINENYYISPSLD 977
Query: 57 DLGKREVIDPGYSSRVPDFTVGRLGYGYVKFLGNTDVRWLDLDQ----IVKFGRHEIVVY 112
L ++ +VP VG YG ++FL D+ + L I+ F ++Y
Sbjct: 978 TLSSYSLLQ---LRKVPHLVVGHKSYGKIEFLEPVDLAGIPLTSLGGVIITFEPKTCIIY 1034
Query: 113 EDESSKPEVGQGLNKAAEVTLFL---QGRYLSLKLKEGDSDDFVKKMKERTERQ-GARFV 168
+ ++P+ G+G+N A +T F + +K+ + VK+ ER ++ ++F
Sbjct: 1035 ANLPNRPKRGEGINVRARITCFNCYPVDKSTRKPIKD-PNHQLVKRHIERLKKNPNSKFE 1093
Query: 169 SFDPVSGEWKFLVVH 183
S+D SG + F+V H
Sbjct: 1094 SYDADSGTYVFIVNH 1108
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 955 944 0.00093 122 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 634 (67 KB)
Total size of DFA: 494 KB (2229 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 85.50u 0.09s 85.59t Elapsed: 00:00:06
Total cpu time: 85.51u 0.09s 85.60t Elapsed: 00:00:06
Start: Fri May 10 22:23:51 2013 End: Fri May 10 22:23:57 2013