BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002184
         (955 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359484919|ref|XP_002266524.2| PREDICTED: superkiller viralicidic activity 2-like 2-like [Vitis
           vinifera]
          Length = 995

 Score = 1745 bits (4519), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 856/996 (85%), Positives = 902/996 (90%), Gaps = 42/996 (4%)

Query: 1   MEESLMAGKRKAPEEDLHVTGTP-EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGT 59
           MEES   GKRK PEE+  V  TP +EES  K+RNLTR+CVHE AVP GY   KDE++HGT
Sbjct: 1   MEESPTLGKRKLPEENSEVKQTPKQEESASKRRNLTRTCVHEAAVPVGYTSNKDESVHGT 60

Query: 60  FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
            +NPVYNG+MAKTY F LDPFQ+VSVACLERNESVLVSAHTSAGKTAVAEY+IAMAFRDK
Sbjct: 61  LSNPVYNGKMAKTYPFTLDPFQQVSVACLERNESVLVSAHTSAGKTAVAEYSIAMAFRDK 120

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
           QRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV
Sbjct: 121 QRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 180

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           LKEVAWVIFDEIHYMKDRERGVVWEESIIFLP AIKMVFLSATMSNAT+FAEWIC+LHKQ
Sbjct: 181 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPTAIKMVFLSATMSNATEFAEWICNLHKQ 240

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK--IGGRRE 297
           PCHVVYTDFRPTPLQHYVFP+GGSGLYLVVDE EQFREDNFVKLQD+F KQK  +G +  
Sbjct: 241 PCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSKSV 300

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           N K SGR+AKGG+ SGGSDIFKIVKMIMERKFQPVI+FSFSRRECEQHAMSMSKLDFNT+
Sbjct: 301 NSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNTK 360

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EEKD VEQVF+NAV CLNEEDRNLPAIELMLPLL+RGIAVHHSGLLP+IKELVELLFQEG
Sbjct: 361 EEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQEG 420

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR+IGSGEYIQMSGRAGRRGKDDRGI
Sbjct: 421 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDRGI 480

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           CIIM+DEQMEMNTL+DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI NSFHQF
Sbjct: 481 CIIMIDEQMEMNTLRDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVISNSFHQF 540

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
           QYEKALPDIGKKVSKLE EAA LDASGEAEVAEYHKL+LDIAQLEKK+MSEITRPERVLY
Sbjct: 541 QYEKALPDIGKKVSKLEHEAAMLDASGEAEVAEYHKLRLDIAQLEKKMMSEITRPERVLY 600

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI----------- 641
           +L  GRL+KVREGGTDWGWGVVVNVVKK  AG GTLP     SRGGGYI           
Sbjct: 601 FLLPGRLVKVREGGTDWGWGVVVNVVKKAPAG-GTLPSALSSSRGGGYIVDTLLHCSPGS 659

Query: 642 ----------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
                                 VPVQL LIS LSK+R+S+PPDLRPL+ARQSILLAVQEL
Sbjct: 660 TENGSRPKPCPPHPGEKGEMHVVPVQLSLISALSKLRISIPPDLRPLEARQSILLAVQEL 719

Query: 680 ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE 739
            +RFPQGLPKLNPVKDM IEDPE V+L NQIEELE KLFAHPL+KSQDENQIR FQRKAE
Sbjct: 720 GTRFPQGLPKLNPVKDMGIEDPEFVELANQIEELEQKLFAHPLHKSQDENQIRSFQRKAE 779

Query: 740 VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
           VNHEIQQLK+KMRDSQ+QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL
Sbjct: 780 VNHEIQQLKTKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 839

Query: 800 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
           VTELMFNGTFNDLDHHQVAALASCFIP DKS+EQI+LR ELAKPLQQLQ+SAR+IAEIQ+
Sbjct: 840 VTELMFNGTFNDLDHHQVAALASCFIPGDKSTEQIHLRTELAKPLQQLQDSARRIAEIQH 899

Query: 860 ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
           ECKLEVNVDEYVEST RP+LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ
Sbjct: 900 ECKLEVNVDEYVESTARPYLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 959

Query: 920 LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           LRAAA AVGE NLE KFAAASESLRRGIMF+NSLYL
Sbjct: 960 LRAAANAVGEANLENKFAAASESLRRGIMFANSLYL 995


>gi|224087335|ref|XP_002308126.1| predicted protein [Populus trichocarpa]
 gi|222854102|gb|EEE91649.1| predicted protein [Populus trichocarpa]
          Length = 985

 Score = 1717 bits (4448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 829/966 (85%), Positives = 888/966 (91%), Gaps = 35/966 (3%)

Query: 25  EESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVS 84
           ++S  K+R LTR+CVHEVAVP GY   KDE  HGT +NP+YNGEMAK+Y+FELDPFQ+VS
Sbjct: 20  QDSALKKRILTRTCVHEVAVPHGYESNKDETFHGTLSNPLYNGEMAKSYAFELDPFQKVS 79

Query: 85  VACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFK 144
           VACLERNESVLVSAHTSAGKTAVAEYAIAMAFR+KQRVIYTSPLKALSNQKYREL QEF+
Sbjct: 80  VACLERNESVLVSAHTSAGKTAVAEYAIAMAFREKQRVIYTSPLKALSNQKYRELQQEFQ 139

Query: 145 DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWE 204
           DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE+LKEVAW+IFDEIHYMKDRERGVVWE
Sbjct: 140 DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEILKEVAWIIFDEIHYMKDRERGVVWE 199

Query: 205 ESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSG 264
           ESIIF+P  IKMVFLSATMSNAT+FAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGG+G
Sbjct: 200 ESIIFMPQVIKMVFLSATMSNATEFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGAG 259

Query: 265 LYLVVDEKEQFREDNFVKLQDTFLKQKIG--GRRENGKASGRMAKGGSGSGGSDIFKIVK 322
           LYLVVDE EQFREDNF+KLQDTF KQK G   +  N KASGR++KGG+ SGGSDI+KIVK
Sbjct: 260 LYLVVDESEQFREDNFMKLQDTFSKQKAGEGNKSANAKASGRISKGGNASGGSDIYKIVK 319

Query: 323 MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
           MIMERKFQPVIVFSFSRRE EQHAMSMSKLDFNTQEEKD VEQVF NA+ CLNEEDRNLP
Sbjct: 320 MIMERKFQPVIVFSFSRREVEQHAMSMSKLDFNTQEEKDIVEQVFNNAILCLNEEDRNLP 379

Query: 383 AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
           AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT
Sbjct: 380 AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 439

Query: 443 AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPL 502
           AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD+RGICIIM+DE+MEMNTLKDMVLGKPAPL
Sbjct: 440 AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMIDERMEMNTLKDMVLGKPAPL 499

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
           VSTFRLSYYSILNLMSRAEGQFTAEHVI+NSFHQFQYEKALPDIG+KVSKLEEEAA LDA
Sbjct: 500 VSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEKALPDIGEKVSKLEEEAAVLDA 559

Query: 563 SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV 622
           SGEAEVA YH LKL++AQLEKK+M EITRPER+LYYL +GRLIKVREGGTDWGWGVVVNV
Sbjct: 560 SGEAEVAGYHNLKLEMAQLEKKMMKEITRPERILYYLCTGRLIKVREGGTDWGWGVVVNV 619

Query: 623 VKKPSAGVGTLPSRGGGYI---------------------------------VPVQLPLI 649
           VKKP+AG+GTLPS+G GYI                                 VPVQLPLI
Sbjct: 620 VKKPTAGLGTLPSKGAGYIVDTLLHCSPGPSESGSRPRPCPPRPGEKGEMHVVPVQLPLI 679

Query: 650 STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
             LSK+R+S+P DLRPL+ARQSILLAVQEL +RFP+GLPKLNPVKDMKIEDPE+V+LVNQ
Sbjct: 680 CALSKVRISIPADLRPLEARQSILLAVQELGNRFPEGLPKLNPVKDMKIEDPEIVELVNQ 739

Query: 710 IEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
           IEELE KL AHPLNKSQD NQ++ F RKAEVNHEIQQLKSKMRDSQ+QKFR+ELKNRSRV
Sbjct: 740 IEELEQKLHAHPLNKSQDINQMKSFHRKAEVNHEIQQLKSKMRDSQLQKFREELKNRSRV 799

Query: 770 LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
           LK+LGHIDADGVVQ+KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK
Sbjct: 800 LKRLGHIDADGVVQVKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 859

Query: 830 SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
           SSEQI+LR ELAKPLQQLQESARKIAEIQ ECKL++NVDEYVESTVRPFL+DV+YCWSKG
Sbjct: 860 SSEQIHLRTELAKPLQQLQESARKIAEIQYECKLDINVDEYVESTVRPFLVDVVYCWSKG 919

Query: 890 ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
           A+F+EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV+LE KFAAASESLRRGIMF
Sbjct: 920 ASFSEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVSLESKFAAASESLRRGIMF 979

Query: 950 SNSLYL 955
           +NSLYL
Sbjct: 980 ANSLYL 985


>gi|449470374|ref|XP_004152892.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cucumis
            sativus]
          Length = 1014

 Score = 1707 bits (4420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 829/1014 (81%), Positives = 904/1014 (89%), Gaps = 59/1014 (5%)

Query: 1    MEESLMAGKRKAPEEDLHV--TG----------------------TPEEESTKKQRNLTR 36
            MEES + GKRK  EE+  V  TG                      TP +E+   +R+LTR
Sbjct: 1    MEESPILGKRKDSEEESAVAETGNTQETSSSKRPKESKNLEDEKTTPSQETVSNRRSLTR 60

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +CVHEVAVP GY+ TKDE++HGT  NPVYNG MAKTY F LDPFQ+VSV+CLERNES+LV
Sbjct: 61   TCVHEVAVPVGYSSTKDESVHGTLPNPVYNGTMAKTYPFTLDPFQQVSVSCLERNESILV 120

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL QEFKDVGLMTGDVTLS
Sbjct: 121  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFKDVGLMTGDVTLS 180

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM+DRERGVVWEESIIFLPPAIKM
Sbjct: 181  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMRDRERGVVWEESIIFLPPAIKM 240

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSATMSNAT+FAEWIC++HKQPCHVVYTDFRPTPLQHYVFP GG+GLYLVVDE EQFR
Sbjct: 241  VFLSATMSNATEFAEWICYIHKQPCHVVYTDFRPTPLQHYVFPAGGNGLYLVVDENEQFR 300

Query: 277  EDNFVKLQDTFLKQK--IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            EDNF+KLQDTF KQK  +G R  NGK+SGR+AKGGS SGGSDI+KIVKMIMER FQPVIV
Sbjct: 301  EDNFLKLQDTFAKQKQIVGHRTANGKSSGRIAKGGSASGGSDIYKIVKMIMERNFQPVIV 360

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFSRRECEQHAMSMSKLDFNTQEEKD VE +F+NA+ CLNEEDR LPAIELMLPLL+RG
Sbjct: 361  FSFSRRECEQHAMSMSKLDFNTQEEKDMVEHIFRNAILCLNEEDRELPAIELMLPLLQRG 420

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA KKWDGDSHR+
Sbjct: 421  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAFKKWDGDSHRF 480

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            IGSGEYIQMSGRAGRRGKD+RGICIIM+DEQMEM T+KDM+LGKPAPLVSTFRLSYYSIL
Sbjct: 481  IGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMGTIKDMILGKPAPLVSTFRLSYYSIL 540

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NLMSRAEGQFTAEHVI++SFHQFQ+EKALPDIGK+VSKLEEEAA+LDASGEAEVAEYHKL
Sbjct: 541  NLMSRAEGQFTAEHVIRHSFHQFQHEKALPDIGKRVSKLEEEAATLDASGEAEVAEYHKL 600

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
            KLDIAQLEKK+MSEITRPERVLY+L  GRL+KVREGGTDWGWGVVVNVVKKPSAG+G LP
Sbjct: 601  KLDIAQLEKKMMSEITRPERVLYFLLPGRLVKVREGGTDWGWGVVVNVVKKPSAGLGILP 660

Query: 635  SRGGGYI---------------------------------VPVQLPLISTLSKIRLSVPP 661
            SRGG YI                                 VPVQLPLIS LSK+R+S+P 
Sbjct: 661  SRGGAYIVDTLLQCSPCLSENSSRPKPCPPHPGEKGEMHVVPVQLPLISALSKLRISIPS 720

Query: 662  DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
            DLRP++AR+SILLA++EL +RFPQG PKLNPVKDM IEDPE+V+LV QIEELE KL+AHP
Sbjct: 721  DLRPVEARESILLALEELGTRFPQGFPKLNPVKDMNIEDPEIVELVKQIEELERKLYAHP 780

Query: 722  LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            L+KS++ +Q++CFQRKAEVNHEIQ LK+KMRDSQ+QKFRDELKNRSRVLKKLGH+DADGV
Sbjct: 781  LHKSREVDQMKCFQRKAEVNHEIQILKNKMRDSQLQKFRDELKNRSRVLKKLGHVDADGV 840

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ+AALASCFIP DKS+EQI LR ELA
Sbjct: 841  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQIAALASCFIPGDKSNEQIQLRTELA 900

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            +PLQQLQ+SAR+IAEIQ+ECKL++NV+EYVESTVRP LMDVIYCWSKGA+F+EVIQMTDI
Sbjct: 901  RPLQQLQDSARRIAEIQHECKLDINVEEYVESTVRPHLMDVIYCWSKGASFSEVIQMTDI 960

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            FEGSIIRSARRLDEFLNQLRAAA AVGEVNLE KF+AASESLRRGIMF+NSLYL
Sbjct: 961  FEGSIIRSARRLDEFLNQLRAAANAVGEVNLESKFSAASESLRRGIMFANSLYL 1014


>gi|255581147|ref|XP_002531387.1| helicase, putative [Ricinus communis]
 gi|223529017|gb|EEF31007.1| helicase, putative [Ricinus communis]
          Length = 962

 Score = 1679 bits (4349), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 817/955 (85%), Positives = 871/955 (91%), Gaps = 40/955 (4%)

Query: 1   MEESLMAG-KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGT 59
           MEES     KRK  E    +  TP++ES +K+RNLTR+CVHEVAVP GY  TK+E+IHGT
Sbjct: 1   MEESPTPTVKRKETE----IGDTPQQESAQKRRNLTRTCVHEVAVPIGYVSTKEESIHGT 56

Query: 60  FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
            +NP +NG+ AKTY FELDPFQ+VSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK
Sbjct: 57  LSNPEFNGDNAKTYPFELDPFQKVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 116

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
           QRVIYTSPLKALSNQKYRELHQEF+DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE+
Sbjct: 117 QRVIYTSPLKALSNQKYRELHQEFQDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEI 176

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP IKMVFLSATMSNAT+FAEWICHLHKQ
Sbjct: 177 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPEIKMVFLSATMSNATEFAEWICHLHKQ 236

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG--GRRE 297
           PCHVVYTDFRPTPLQHYVFP+GG GLYLVVDE EQFREDNFVKLQDTF KQK+G   +  
Sbjct: 237 PCHVVYTDFRPTPLQHYVFPMGGVGLYLVVDENEQFREDNFVKLQDTFTKQKVGDWNKSS 296

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           NGK SGR+AK G+ S GSDI+KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ
Sbjct: 297 NGKGSGRIAKAGNASAGSDIYKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 356

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EEKD VEQVF+NA+ CLNEEDR+LPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEG
Sbjct: 357 EEKDVVEQVFKNAILCLNEEDRDLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEG 416

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI
Sbjct: 417 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 476

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           CIIM+DE+MEMNT+KDM+LGKPAPLVSTFRLSYYSILNLM RAEGQFTAEHVIKNSFHQF
Sbjct: 477 CIIMIDERMEMNTIKDMILGKPAPLVSTFRLSYYSILNLMRRAEGQFTAEHVIKNSFHQF 536

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
           QYEKALPDIGKKVSKLEEEAA LDASGEAEVAEYH LKL++AQLEKK+M+EITRPER+LY
Sbjct: 537 QYEKALPDIGKKVSKLEEEAAVLDASGEAEVAEYHNLKLEMAQLEKKMMAEITRPERILY 596

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI---------------- 641
           YL +GRLI+VREGGTDWGWGVVVNVVKKP+AG+GTLPSRGGGYI                
Sbjct: 597 YLCTGRLIRVREGGTDWGWGVVVNVVKKPAAGLGTLPSRGGGYIVDTLLHCSPASSESGS 656

Query: 642 -----------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
                            VPVQLPLIS LSK+R+SVP DLRPL+ARQSILLAVQEL +RFP
Sbjct: 657 RPRPCPPRPGEKGEMHVVPVQLPLISALSKVRISVPSDLRPLEARQSILLAVQELGTRFP 716

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEI 744
            GLPKLNPVKDMKIEDPE+VDLVNQIE +E KL AHPL+KSQD NQIR FQRKAEVNHEI
Sbjct: 717 DGLPKLNPVKDMKIEDPEIVDLVNQIENMEKKLHAHPLHKSQDMNQIRNFQRKAEVNHEI 776

Query: 745 QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
           QQLKSKMRDSQ+QKFRDELKNRSRVLK+LGHIDADGVVQLKGRAACLIDTGDELLVTELM
Sbjct: 777 QQLKSKMRDSQLQKFRDELKNRSRVLKRLGHIDADGVVQLKGRAACLIDTGDELLVTELM 836

Query: 805 FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           FNGTFNDLDHHQVAALASCFIPVDKS+EQI+LR ELAKPLQQLQESARK+AEIQ ECKL+
Sbjct: 837 FNGTFNDLDHHQVAALASCFIPVDKSNEQIHLRSELAKPLQQLQESARKVAEIQYECKLD 896

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
           VNVDEYVESTVRPFLMDV+YCWSKGA+FA+VIQMTDIFEGSIIRSARRLDEFLNQ
Sbjct: 897 VNVDEYVESTVRPFLMDVVYCWSKGASFADVIQMTDIFEGSIIRSARRLDEFLNQ 951


>gi|356513235|ref|XP_003525319.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
           2-like 2-like [Glycine max]
          Length = 982

 Score = 1643 bits (4255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 807/978 (82%), Positives = 880/978 (89%), Gaps = 26/978 (2%)

Query: 2   EESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFA 61
           +ESL  GKR+ P  DL VT T      KK R+  R+CVHEVAVPSGY  +KDE +HGT +
Sbjct: 7   KESLTLGKRREP--DLPVTVTETTSMPKKARSSERTCVHEVAVPSGYVSSKDEDLHGTLS 64

Query: 62  NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
           NP++NG MAK+Y F LDPFQ+VS+ACLERNESVLVSAHTS GKTAVAEYAIAM+FRDKQR
Sbjct: 65  NPLHNGPMAKSYPFTLDPFQQVSIACLERNESVLVSAHTSDGKTAVAEYAIAMSFRDKQR 124

Query: 122 VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           VIYTSPLKALSNQKYREL QEF DVGLMTGDVTLSPNA+CLVMTTEILRGMLYRGSEVLK
Sbjct: 125 VIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRGMLYRGSEVLK 184

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC++HKQPC
Sbjct: 185 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPC 244

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
           HVVYTDFRPTPLQHYVFP+GGSGLYLVVDE EQFREDNF+KLQDTF KQ +G  +  GK 
Sbjct: 245 HVVYTDFRPTPLQHYVFPMGGSGLYLVVDENEQFREDNFLKLQDTFTKQTLGDGKRGGKG 304

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            GR  KG + SGGSDI+KIVKMIME+KFQPVI+FSFSRRECEQHAMSMSKLDFNTQEEKD
Sbjct: 305 GGRGGKGANASGGSDIYKIVKMIMEQKFQPVIIFSFSRRECEQHAMSMSKLDFNTQEEKD 364

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
           TVE VF+NAV CLNEEDR LPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEGLVKA
Sbjct: 365 TVEHVFRNAVLCLNEEDRCLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKA 424

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMGLNMPAKTV+FTAVKKWDGDSHRYIGSGEYIQMSGRAGR GKD+RGICIIM
Sbjct: 425 LFATETFAMGLNMPAKTVIFTAVKKWDGDSHRYIGSGEYIQMSGRAGRCGKDERGICIIM 484

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           +DEQMEMN LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI+NSFHQFQYEK
Sbjct: 485 IDEQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEK 544

Query: 542 ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
           ALPDI K+V+KLE+E A LDASGEA+V+EYHKLKL+IAQLEKK+MS+I RPE +LY+L  
Sbjct: 545 ALPDIEKRVTKLEQEVALLDASGEAQVSEYHKLKLEIAQLEKKIMSKIMRPEIILYFLVP 604

Query: 602 GRLIKVREGGTDWGWGVVVNVVKKPSAG---VGTL-----------------PSRGGG-- 639
           GRLIKVREGGTDWGWGVVVNVVKKPS G   V TL                 P R G   
Sbjct: 605 GRLIKVREGGTDWGWGVVVNVVKKPSGGGYMVDTLLHCSPVSNENSLRPKPCPPRPGEKG 664

Query: 640 --YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
             ++VPVQLPLIS L ++R+S+PPDLRPL+ARQSILLAVQ L +RFPQGLPKLNPVKDM 
Sbjct: 665 EMHVVPVQLPLISALGQLRVSIPPDLRPLEARQSILLAVQXLGNRFPQGLPKLNPVKDMD 724

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQ 757
           + D E+V+LVNQ+EELE KL AHP++K QD +QI+CF+RKAEVNHE+QQLK+KMRDSQ+Q
Sbjct: 725 VRDSEIVELVNQVEELEKKLVAHPMHKHQDMDQIKCFERKAEVNHEVQQLKTKMRDSQLQ 784

Query: 758 KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           KFR+ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV
Sbjct: 785 KFREELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 844

Query: 818 AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
           AALASCFIP DKS+EQI LR ELA+PLQQLQ+SAR+IAEIQ+ECKL++NV+EYVESTVRP
Sbjct: 845 AALASCFIPGDKSTEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVNEYVESTVRP 904

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
           FLMDVIY WSKGA FA+VIQMTDIFEGSIIRSARRLDEFLNQLRAAA AVGE +LEKKFA
Sbjct: 905 FLMDVIYSWSKGANFADVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEADLEKKFA 964

Query: 938 AASESLRRGIMFSNSLYL 955
           AASESLRRGIMF+NSLYL
Sbjct: 965 AASESLRRGIMFANSLYL 982


>gi|356523685|ref|XP_003530466.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine
           max]
          Length = 976

 Score = 1636 bits (4237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 810/977 (82%), Positives = 883/977 (90%), Gaps = 28/977 (2%)

Query: 3   ESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFAN 62
           ES   GKR+ PE  L VT T      KK R+  R+CVHEVAVPS Y  +KDE +HGT +N
Sbjct: 4   ESPTLGKRREPE--LPVTET--TSMPKKARSSERTCVHEVAVPSSYVSSKDEELHGTLSN 59

Query: 63  PVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRV 122
           P++NG MAK+Y F LDPFQ+VS+ACLERNESVLVSAHTSAGKTAVAEYAIAM+FRDKQRV
Sbjct: 60  PLHNGPMAKSYPFTLDPFQQVSIACLERNESVLVSAHTSAGKTAVAEYAIAMSFRDKQRV 119

Query: 123 IYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKE 182
           IYTSPLKALSNQKYREL QEF DVGLMTGDVTLSPNA+CLVMTTEILRGMLYRGSEVLKE
Sbjct: 120 IYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRGMLYRGSEVLKE 179

Query: 183 VAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCH 242
           VAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC++HKQPCH
Sbjct: 180 VAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPCH 239

Query: 243 VVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
           VVYTDFRPTPLQHYVFP+GGSGLYLVVDE EQFREDNF+KLQDTF KQ +G  +  GK +
Sbjct: 240 VVYTDFRPTPLQHYVFPMGGSGLYLVVDENEQFREDNFLKLQDTFTKQNLGDGKRGGKGA 299

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
           GR  KGG+ SGGSDI+KIVKMIMERKFQPVI+FSFSRRECEQHAMSMSKLDFN+QEEKDT
Sbjct: 300 GRGGKGGNASGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNSQEEKDT 359

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           VE VFQNAV CLNEEDRNLPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEGLVKAL
Sbjct: 360 VEHVFQNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKAL 419

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMGLNMPAKTV+FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD+RGICIIM+
Sbjct: 420 FATETFAMGLNMPAKTVIFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIMI 479

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DEQMEMN LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI+NSFHQFQYEKA
Sbjct: 480 DEQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEKA 539

Query: 543 LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
           LPD+ K+VSKLE+E A LDASGEA+V+EYHKLKL+IAQLEKK+MS+I RPE +LY+L  G
Sbjct: 540 LPDMEKRVSKLEQEVALLDASGEAQVSEYHKLKLEIAQLEKKIMSKIIRPEIILYFLVPG 599

Query: 603 RLIKVREGGTDWGWGVVVNVVKKPSAG---VGTL-----------------PSRGGG--- 639
           RLIKVREGGTDWGWGVVVNVVKKPS G   V TL                 P R G    
Sbjct: 600 RLIKVREGGTDWGWGVVVNVVKKPSGGGYIVDTLLHCSPVSNENSSRPKPCPPRPGEKGE 659

Query: 640 -YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
            ++VPVQLPLIS L ++R+S+PPDLRPL+ARQSILLAVQEL +RFPQGLPKLNPVKDM +
Sbjct: 660 MHVVPVQLPLISALGQLRVSIPPDLRPLEARQSILLAVQELGNRFPQGLPKLNPVKDMDV 719

Query: 699 EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
            D E+V+LVNQ+EELE KLF HP++K QD +QI+CF+RKAEVNHE+QQLK+KMRDSQ+QK
Sbjct: 720 RDSEIVELVNQVEELEKKLFTHPMHKHQDMDQIKCFERKAEVNHEVQQLKTKMRDSQLQK 779

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
           FR+ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA
Sbjct: 780 FREELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 839

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           ALASCFIP DKS+EQI LR ELA+PLQQLQ+SAR+IAEIQ+ECKL++NV+EYV+STVRPF
Sbjct: 840 ALASCFIPGDKSTEQIQLRTELARPLQQLQDSARRIAEIQHECKLDINVNEYVDSTVRPF 899

Query: 879 LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
           LMDVIY WSKGA FA+VIQMTDIFEGSIIRSARRLDEFLNQLRAAA AVGE +LEKKFAA
Sbjct: 900 LMDVIYSWSKGANFADVIQMTDIFEGSIIRSARRLDEFLNQLRAAANAVGEADLEKKFAA 959

Query: 939 ASESLRRGIMFSNSLYL 955
           ASESLRRGIMF+NSLYL
Sbjct: 960 ASESLRRGIMFANSLYL 976


>gi|357520641|ref|XP_003630609.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
 gi|355524631|gb|AET05085.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
          Length = 984

 Score = 1627 bits (4214), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 803/977 (82%), Positives = 879/977 (89%), Gaps = 24/977 (2%)

Query: 2   EESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFA 61
           +ES   GKR  PE      G       KK R+   +CVHEVAVP  Y  TKDE++HGT +
Sbjct: 9   QESTTLGKRSEPEPVSTADGGDTSSQPKKCRSSECTCVHEVAVPINYTSTKDESLHGTLS 68

Query: 62  NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
           NP++NG MAKTY F LDPFQ+VS+ACLERNESVLVSAHTSAGKTA+AEYAIAM+FRDKQR
Sbjct: 69  NPLHNGTMAKTYPFTLDPFQQVSIACLERNESVLVSAHTSAGKTAIAEYAIAMSFRDKQR 128

Query: 122 VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           VIYTSPLKALSNQKYREL QEF DVGLMTGDVTLSPNA+CLVMTTEILRGMLYRGSEVLK
Sbjct: 129 VIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLSPNATCLVMTTEILRGMLYRGSEVLK 188

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC++HKQPC
Sbjct: 189 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICNIHKQPC 248

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
           HVVYTDFRPTPLQHYVFP+GGSGLYLVVDE EQFREDNF+K++DTF+KQK+G  +  GK 
Sbjct: 249 HVVYTDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFLKVEDTFVKQKLGEGK-GGKT 307

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
           +GR  KGGS SGGSDI+KIVKMIMERKFQPVI+FSFSRRECEQHAMSMSKLDFN+QEEKD
Sbjct: 308 NGRFGKGGSASGGSDIYKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNSQEEKD 367

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
           TVE VFQNA+ CLNEEDR+LPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEGLVKA
Sbjct: 368 TVEHVFQNAMLCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKA 427

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD+RGICIIM
Sbjct: 428 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGICIIM 487

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           +DEQMEMN LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI+NSFHQFQYEK
Sbjct: 488 IDEQMEMNNLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIRNSFHQFQYEK 547

Query: 542 ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            LPD+GK+VS LE+E A LDA+GEAEV+EYHKLKLD+AQLEKK+MS+I RPE +LY+L  
Sbjct: 548 TLPDVGKRVSMLEQEVALLDAAGEAEVSEYHKLKLDLAQLEKKMMSQIIRPEMILYFLVP 607

Query: 602 GRLIKVREGGTDWGWGVVVNVVKKPSAG--VGTL-----------------PSRGGG--- 639
           GRLIKVREGGTDWGWGVVVNVVKKP  G  V TL                 P R G    
Sbjct: 608 GRLIKVREGGTDWGWGVVVNVVKKPVGGYIVDTLLHCSPGSNENSIRPKPCPPRPGEKGE 667

Query: 640 -YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
            ++VPVQLPLIS LSK+R+ VPPDLRPL+ARQSILLAVQEL +RFPQGLPKLNPVKDM +
Sbjct: 668 MHVVPVQLPLISALSKLRIYVPPDLRPLEARQSILLAVQELGNRFPQGLPKLNPVKDMDV 727

Query: 699 EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
            D E+V+LVNQIEELE KLF HP++K QD +QI+CF+RKAEVNHEIQQLK+KMRDSQ+QK
Sbjct: 728 RDSEIVELVNQIEELEKKLFDHPMHKIQDVDQIKCFERKAEVNHEIQQLKAKMRDSQLQK 787

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
           FR+ELKNRSRVLKKLGHID+D VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA
Sbjct: 788 FREELKNRSRVLKKLGHIDSDSVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 847

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           ALASCFIP++KSSEQI LR ELA+PLQQLQ+SAR+IAEI++ECKLEVNV+EYVESTVRPF
Sbjct: 848 ALASCFIPIEKSSEQIQLRSELARPLQQLQDSARRIAEIEHECKLEVNVNEYVESTVRPF 907

Query: 879 LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
           LMDVIY WSKG++FA+V QMTDIFEGSIIR+ARRLDEFLNQLRAAA AVGE +LEKKFAA
Sbjct: 908 LMDVIYSWSKGSSFADVTQMTDIFEGSIIRAARRLDEFLNQLRAAADAVGEADLEKKFAA 967

Query: 939 ASESLRRGIMFSNSLYL 955
           ASESLRRGI+F+NSLYL
Sbjct: 968 ASESLRRGIIFANSLYL 984


>gi|297831726|ref|XP_002883745.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
 gi|297329585|gb|EFH60004.1| HUA enhancer 2 [Arabidopsis lyrata subsp. lyrata]
          Length = 984

 Score = 1616 bits (4185), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 802/984 (81%), Positives = 875/984 (88%), Gaps = 29/984 (2%)

Query: 1   MEESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTF 60
           MEE    GKRK  E       TP  E T K+R+L R+CVHEVAVP+ Y  TK+E IHGT 
Sbjct: 1   MEEPETLGKRKVSESSKLSDETPTPEPTTKRRSLIRACVHEVAVPNDYTPTKEETIHGTL 60

Query: 61  ANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQ 120
            NPV+NG+MAKTY F+LDPFQ VSVACLER ES+LVSAHTSAGKTAVAEYAIAMAFRDKQ
Sbjct: 61  DNPVFNGDMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDKQ 120

Query: 121 RVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVL 180
           RVIYTSPLKALSNQKYREL  EFKDVGLMTGDVTLSPNASCLVMTTEILR MLYRGSEVL
Sbjct: 121 RVIYTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEVL 180

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
           KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC+LHKQP
Sbjct: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQP 240

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--GGRREN 298
           CHVVYTDFRPTPLQHY FP+GGSGLYLVVD+ EQFREDNFVK+QDTF K K   G +  N
Sbjct: 241 CHVVYTDFRPTPLQHYAFPMGGSGLYLVVDDNEQFREDNFVKMQDTFPKPKSVDGKKSAN 300

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
           GK+ GR AKGG G G SD++KIVKMIM+RKF+PVI+FSFSRRECEQHA+SMSKLDFNT E
Sbjct: 301 GKSGGRGAKGGGGPGDSDVYKIVKMIMDRKFEPVIIFSFSRRECEQHALSMSKLDFNTDE 360

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           EK+ VEQVF NA+ CLNEEDR+LPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEGL
Sbjct: 361 EKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGL 420

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD+RGIC
Sbjct: 421 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGIC 480

Query: 479 IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           IIM+DEQMEMNTL+DM+LGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEHVI++SFHQFQ
Sbjct: 481 IIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQFQ 540

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
           +EKALPDIG KVSKLEEEAA L+ASGEAEVAEYHKL+LDIAQ EKKLMSEI RPERVL +
Sbjct: 541 HEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHKLQLDIAQHEKKLMSEIIRPERVLCF 600

Query: 599 LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG-----------------------TLPS 635
           L +GRL+K+REGGT+WGWGVVVNVVKK S G G                         P 
Sbjct: 601 LDTGRLVKIREGGTEWGWGVVVNVVKKSSVGTGGGYIVDTLLHCSTGFSENGAKPKPCPP 660

Query: 636 RGGG----YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN 691
           R G     ++VPVQLPLIS LS++R+SVP DLRP++ARQSILLAVQEL SRFP G PKL+
Sbjct: 661 RSGEKGEMHVVPVQLPLISALSRLRISVPSDLRPVEARQSILLAVQELSSRFPLGFPKLH 720

Query: 692 PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM 751
           PVKDM I+D E+VDLV+ IEE+E KL AHP++KSQD+ QI+ FQRKAEVN+EIQQLKSKM
Sbjct: 721 PVKDMNIQDTEIVDLVSHIEEVEQKLLAHPMHKSQDDQQIKSFQRKAEVNYEIQQLKSKM 780

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           RDSQ+QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND
Sbjct: 781 RDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 840

Query: 812 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
           LDHHQVAALASCFIPVDKS+EQ+NLR EL KPLQQLQ+SARKIAEIQ+ECKLE++V+EYV
Sbjct: 841 LDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLEIDVEEYV 900

Query: 872 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
           EST+RPFLMDVIY WSKGA+FAE+IQMTDIFEGSIIRSARRLDEFLNQLRAAA AVGE +
Sbjct: 901 ESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAADAVGESS 960

Query: 932 LEKKFAAASESLRRGIMFSNSLYL 955
           LE KFAA SESLRRGIMF+NSLYL
Sbjct: 961 LESKFAATSESLRRGIMFANSLYL 984


>gi|16024936|gb|AAL11446.1| HUA enhancer 2 [Arabidopsis thaliana]
          Length = 991

 Score = 1614 bits (4180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 800/991 (80%), Positives = 876/991 (88%), Gaps = 36/991 (3%)

Query: 1   MEESLMAGKRKAPEED-LHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGT 59
           MEE    GKRK  E   L    TP  E   K+R+L R+CVHEVAVP+ Y  TK+E IHGT
Sbjct: 1   MEEPETLGKRKESESSKLRSDETPTPEPRTKRRSLKRACVHEVAVPNDYTPTKEETIHGT 60

Query: 60  FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
             NPV+NG+MAKTY F+LDPFQ VSVACLER ES+LVSAHTSAGKTAVAEYAIAMAFRDK
Sbjct: 61  LDNPVFNGDMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDK 120

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
           QRVIYTSPLKALSNQKYREL  EFKDVGLMTGDVTLSPNASCLVMTTEILR MLYRGSEV
Sbjct: 121 QRVIYTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEV 180

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC+LHKQ
Sbjct: 181 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQ 240

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--GGRRE 297
           PCHVVYTDFRPTPLQHY FP+GG GLYLVVD+ EQFRED+FVK+QDTF K K   G +  
Sbjct: 241 PCHVVYTDFRPTPLQHYAFPMGGGGLYLVVDDNEQFREDSFVKMQDTFPKPKSNDGKKSA 300

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           NGK+ GR AKGG G G SD++KIVKMIMERKF+PVI+FSFSRRECEQHA+SMSKLDFNT 
Sbjct: 301 NGKSGGRGAKGGGGPGDSDVYKIVKMIMERKFEPVIIFSFSRRECEQHALSMSKLDFNTD 360

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EEK+ VEQVF NA+ CLNEEDR+LPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEG
Sbjct: 361 EEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEG 420

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD+RGI
Sbjct: 421 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGI 480

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           CIIM+DEQMEMNTL+DM+LGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEHVI++SFHQF
Sbjct: 481 CIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQF 540

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
           Q+EKALPDIG KVSKLEEEAA L+ASGEAEVAEYH L+ DIA+ EKKLMSEI RPERVL 
Sbjct: 541 QHEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPERVLC 600

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI---------------- 641
           +L +GRL+K+REGGTDWGWGVVVNVVK  S G G+  S GGGYI                
Sbjct: 601 FLDTGRLVKIREGGTDWGWGVVVNVVKNSSVGTGSASSHGGGYIVDTLLHCSTGFSENGA 660

Query: 642 -----------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
                            VPVQLPLIS LS++R+SVP DLRP++ARQSILLA+QEL SRFP
Sbjct: 661 KPKPCPPRAGEKGEMHVVPVQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFP 720

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEI 744
            G PKL+PVKDM I+D E+VDLV+QIEE+E KL AHP++KS+D+ QI+ FQRKAEVN+EI
Sbjct: 721 LGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEVNYEI 780

Query: 745 QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
           QQLKSKMRDSQ+QKFRDELKNRSRVLKKLGHIDADGVVQ+KGRAACLIDTGDELLVTELM
Sbjct: 781 QQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELM 840

Query: 805 FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           FNGTFNDLDHHQVAALASCFIPVDKS+EQ+NLR EL KPLQQLQ+SARKIAEIQ+ECKLE
Sbjct: 841 FNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLE 900

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
           ++V+EYVEST+RPFLMDVIY WSKGA+FAE+IQMTDIFEGSIIRSARRLDEFLNQLRAAA
Sbjct: 901 IDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAA 960

Query: 925 QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +AVGE +LE KFAAASESLRRGIMF+NSLYL
Sbjct: 961 EAVGESSLESKFAAASESLRRGIMFANSLYL 991


>gi|18396436|ref|NP_565338.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis
           thaliana]
 gi|20197305|gb|AAC67203.2| expressed protein [Arabidopsis thaliana]
 gi|28973761|gb|AAO64196.1| putative DEAD/DEAH box RNA helicase (HUA ENHANCER2) [Arabidopsis
           thaliana]
 gi|330250934|gb|AEC06028.1| RNA helicase, ATP-dependent, SK12/DOB1 protein [Arabidopsis
           thaliana]
          Length = 995

 Score = 1614 bits (4180), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 800/991 (80%), Positives = 876/991 (88%), Gaps = 36/991 (3%)

Query: 1   MEESLMAGKRKAPEED-LHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGT 59
           MEE    GKRK  E   L    TP  E   K+R+L R+CVHEVAVP+ Y  TK+E IHGT
Sbjct: 5   MEEPETLGKRKESESSKLRSDETPTPEPRTKRRSLKRACVHEVAVPNDYTPTKEETIHGT 64

Query: 60  FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
             NPV+NG+MAKTY F+LDPFQ VSVACLER ES+LVSAHTSAGKTAVAEYAIAMAFRDK
Sbjct: 65  LDNPVFNGDMAKTYPFKLDPFQSVSVACLERKESILVSAHTSAGKTAVAEYAIAMAFRDK 124

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
           QRVIYTSPLKALSNQKYREL  EFKDVGLMTGDVTLSPNASCLVMTTEILR MLYRGSEV
Sbjct: 125 QRVIYTSPLKALSNQKYRELQHEFKDVGLMTGDVTLSPNASCLVMTTEILRAMLYRGSEV 184

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC+LHKQ
Sbjct: 185 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQ 244

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--GGRRE 297
           PCHVVYTDFRPTPLQHY FP+GG GLYLVVD+ EQFRED+FVK+QDTF K K   G +  
Sbjct: 245 PCHVVYTDFRPTPLQHYAFPMGGGGLYLVVDDNEQFREDSFVKMQDTFPKPKSNDGKKSA 304

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           NGK+ GR AKGG G G SD++KIVKMIMERKF+PVI+FSFSRRECEQHA+SMSKLDFNT 
Sbjct: 305 NGKSGGRGAKGGGGPGDSDVYKIVKMIMERKFEPVIIFSFSRRECEQHALSMSKLDFNTD 364

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EEK+ VEQVF NA+ CLNEEDR+LPAIELMLPLL+RGIAVHHSGLLPVIKELVELLFQEG
Sbjct: 365 EEKEVVEQVFNNAMQCLNEEDRSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEG 424

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD+RGI
Sbjct: 425 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDERGI 484

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           CIIM+DEQMEMNTL+DM+LGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEHVI++SFHQF
Sbjct: 485 CIIMIDEQMEMNTLRDMMLGKPAPLLSTFRLSYYTILNLLSRAEGQFTAEHVIRHSFHQF 544

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
           Q+EKALPDIG KVSKLEEEAA L+ASGEAEVAEYH L+ DIA+ EKKLMSEI RPERVL 
Sbjct: 545 QHEKALPDIGNKVSKLEEEAAILNASGEAEVAEYHNLQFDIAKHEKKLMSEIIRPERVLC 604

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI---------------- 641
           +L +GRL+K+REGGTDWGWGVVVNVVK  S G G+  S GGGYI                
Sbjct: 605 FLDTGRLVKIREGGTDWGWGVVVNVVKNSSVGTGSASSHGGGYIVDTLLHCSTGFSENGA 664

Query: 642 -----------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
                            VPVQLPLIS LS++R+SVP DLRP++ARQSILLA+QEL SRFP
Sbjct: 665 KPKPCPPRAGEKGEMHVVPVQLPLISALSRLRISVPSDLRPVEARQSILLALQELSSRFP 724

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEI 744
            G PKL+PVKDM I+D E+VDLV+QIEE+E KL AHP++KS+D+ QI+ FQRKAEVN+EI
Sbjct: 725 LGFPKLHPVKDMNIQDTEIVDLVSQIEEVEQKLLAHPMHKSEDDQQIKSFQRKAEVNYEI 784

Query: 745 QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
           QQLKSKMRDSQ+QKFRDELKNRSRVLKKLGHIDADGVVQ+KGRAACLIDTGDELLVTELM
Sbjct: 785 QQLKSKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQVKGRAACLIDTGDELLVTELM 844

Query: 805 FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           FNGTFNDLDHHQVAALASCFIPVDKS+EQ+NLR EL KPLQQLQ+SARKIAEIQ+ECKLE
Sbjct: 845 FNGTFNDLDHHQVAALASCFIPVDKSNEQVNLRNELTKPLQQLQDSARKIAEIQHECKLE 904

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
           ++V+EYVEST+RPFLMDVIY WSKGA+FAE+IQMTDIFEGSIIRSARRLDEFLNQLRAAA
Sbjct: 905 IDVEEYVESTIRPFLMDVIYSWSKGASFAEIIQMTDIFEGSIIRSARRLDEFLNQLRAAA 964

Query: 925 QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +AVGE +LE KFAAASESLRRGIMF+NSLYL
Sbjct: 965 EAVGESSLESKFAAASESLRRGIMFANSLYL 995


>gi|297736019|emb|CBI24057.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score = 1598 bits (4138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 800/996 (80%), Positives = 845/996 (84%), Gaps = 99/996 (9%)

Query: 1   MEESLMAGKRKAPEEDLHVTGTP-EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGT 59
           MEES   GKRK PEE+  V  TP +EES  K+RNLTR+CVHE AVP GY   KDE++HGT
Sbjct: 1   MEESPTLGKRKLPEENSEVKQTPKQEESASKRRNLTRTCVHEAAVPVGYTSNKDESVHGT 60

Query: 60  FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
            +NPVYNG+MAKTY F LDPFQ+VSVACLERNESVL                        
Sbjct: 61  LSNPVYNGKMAKTYPFTLDPFQQVSVACLERNESVL------------------------ 96

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
           QRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTLSPNASCL                 
Sbjct: 97  QRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLSPNASCL----------------- 139

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
                           DRERGVVWEESIIFLP AIKMVFLSATMSNAT+FAEWIC+LHKQ
Sbjct: 140 ----------------DRERGVVWEESIIFLPTAIKMVFLSATMSNATEFAEWICNLHKQ 183

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK--IGGRRE 297
           PCHVVYTDFRPTPLQHYVFP+GGSGLYLVVDE EQFREDNFVKLQD+F KQK  +G +  
Sbjct: 184 PCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSKSV 243

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           N K SGR+AKGG+ SGGSDIFKIVKMIMERKFQPVI+FSFSRRECEQHAMSMSKLDFNT+
Sbjct: 244 NSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNTK 303

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EEKD VEQVF+NAV CLNEEDRNLPAIELMLPLL+RGIAVHHSGLLP+IKELVELLFQEG
Sbjct: 304 EEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQEG 363

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR+IGSGEYIQMSGRAGRRGKDDRGI
Sbjct: 364 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDRGI 423

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           CIIM+DEQMEMNTL+DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI NSFHQF
Sbjct: 424 CIIMIDEQMEMNTLRDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVISNSFHQF 483

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
           QYEKALPDIGKKVSKLE EAA LDASGEAEVAEYHKL+LDIAQLEKK+MSEITRPERVLY
Sbjct: 484 QYEKALPDIGKKVSKLEHEAAMLDASGEAEVAEYHKLRLDIAQLEKKMMSEITRPERVLY 543

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI----------- 641
           +L  GRL+KVREGGTDWGWGVVVNVVKK  AG GTLP     SRGGGYI           
Sbjct: 544 FLLPGRLVKVREGGTDWGWGVVVNVVKKAPAG-GTLPSALSSSRGGGYIVDTLLHCSPGS 602

Query: 642 ----------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
                                 VPVQL LIS LSK+R+S+PPDLRPL+ARQSILLAVQEL
Sbjct: 603 TENGSRPKPCPPHPGEKGEMHVVPVQLSLISALSKLRISIPPDLRPLEARQSILLAVQEL 662

Query: 680 ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE 739
            +RFPQGLPKLNPVKDM IEDPE V+L NQIEELE KLFAHPL+KSQDENQIR FQRKAE
Sbjct: 663 GTRFPQGLPKLNPVKDMGIEDPEFVELANQIEELEQKLFAHPLHKSQDENQIRSFQRKAE 722

Query: 740 VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
           VNHEIQQLK+KMRDSQ+QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL
Sbjct: 723 VNHEIQQLKTKMRDSQLQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 782

Query: 800 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
           VTELMFNGTFNDLDHHQVAALASCFIP DKS+EQI+LR ELAKPLQQLQ+SAR+IAEIQ+
Sbjct: 783 VTELMFNGTFNDLDHHQVAALASCFIPGDKSTEQIHLRTELAKPLQQLQDSARRIAEIQH 842

Query: 860 ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
           ECKLEVNVDEYVEST RP+LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ
Sbjct: 843 ECKLEVNVDEYVESTARPYLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 902

Query: 920 LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           LRAAA AVGE NLE KFAAASESLRRGIMF+NSLYL
Sbjct: 903 LRAAANAVGEANLENKFAAASESLRRGIMFANSLYL 938


>gi|242056171|ref|XP_002457231.1| hypothetical protein SORBIDRAFT_03g003740 [Sorghum bicolor]
 gi|241929206|gb|EES02351.1| hypothetical protein SORBIDRAFT_03g003740 [Sorghum bicolor]
          Length = 1004

 Score = 1556 bits (4030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 761/1003 (75%), Positives = 862/1003 (85%), Gaps = 50/1003 (4%)

Query: 2    EESLMAGKRKAPEEDL--HVTGTPEEESTK-----KQRNLTRSCVHEVAVPSGYALTKDE 54
            EE+    KRKAP+       +  P +  ++     K+RNL+RSCVHEVAVP GY   KDE
Sbjct: 3    EEAESTCKRKAPDSSAEEQPSSAPAQSQSQADPAAKRRNLSRSCVHEVAVPKGYESAKDE 62

Query: 55   AIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAM 114
            A+HGT ANP +NGEMAK Y F LDPFQ  S+ACLERNESVLVSAHTSAGKT VAEYAIAM
Sbjct: 63   AVHGTLANPDFNGEMAKQYPFNLDPFQSTSIACLERNESVLVSAHTSAGKTVVAEYAIAM 122

Query: 115  AFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLY 174
            AFRDKQRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTL PNA+CLVMTTEILR MLY
Sbjct: 123  AFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLHPNATCLVMTTEILRAMLY 182

Query: 175  RGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWIC 234
            RGSEV+KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC
Sbjct: 183  RGSEVIKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWIC 242

Query: 235  HLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ--KI 292
             LHKQPCHVVYTDFRPTPLQHYVFP+GGSGLYLVVDE  QFREDNF KLQD+F KQ  ++
Sbjct: 243  SLHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENGQFREDNFSKLQDSFAKQNNQL 302

Query: 293  GGRRENG-KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
             GR+  G KASGR+AKGGS SG SDI++IVKMIMERKFQPVI+FSFSRRECE HAMSMSK
Sbjct: 303  DGRKGGGPKASGRIAKGGSASGNSDIYRIVKMIMERKFQPVIIFSFSRRECEHHAMSMSK 362

Query: 352  LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
            LDFNT++EK+ +EQVF+NA+ CL EEDR+LPAIELMLPLLKRGIAVHHSGLLP+IKELVE
Sbjct: 363  LDFNTEDEKECIEQVFRNAIGCLVEEDRSLPAIELMLPLLKRGIAVHHSGLLPIIKELVE 422

Query: 412  LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
            LLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGD++RYIGSGEYIQMSGRAGRRG
Sbjct: 423  LLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDTNRYIGSGEYIQMSGRAGRRG 482

Query: 472  KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            KD+RGIC+IM+DE+MEM+ +KDMVLGKPAPLVSTFRLSYY+ILNLMSR EGQFTAEHVI+
Sbjct: 483  KDERGICVIMIDEKMEMSVIKDMVLGKPAPLVSTFRLSYYTILNLMSRVEGQFTAEHVIR 542

Query: 532  NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            +SFHQFQYEKALP+I +K+++LE+EA  LD+SGE ++AEYHKL LDI++LEKK+MSE+ R
Sbjct: 543  HSFHQFQYEKALPEIIQKITRLEDEATFLDSSGETDLAEYHKLGLDISELEKKIMSEMIR 602

Query: 592  PERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI----- 641
            PER L YL  GRL++VR+G TDWGWGVVVNVVKKP    GTLP     SR   YI     
Sbjct: 603  PERALLYLVPGRLVRVRDGSTDWGWGVVVNVVKKPPVS-GTLPPALSASRSNNYIVDTLL 661

Query: 642  ----------------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSIL 673
                                        VPV LPL+S LS +R+++PPDLRP +ARQ+IL
Sbjct: 662  HCSSNSSENGSRSKPCPPRPGEKGEMHVVPVPLPLVSGLSSVRINIPPDLRPPEARQNIL 721

Query: 674  LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIR 732
             AVQEL  R+PQGLPKL+P+ DM I++PE+VDLV+++E+LE K  +H L+KS Q + ++ 
Sbjct: 722  FAVQELGKRYPQGLPKLHPINDMGIQEPELVDLVHKLEDLEQKQCSHRLHKSGQSDQELS 781

Query: 733  CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
             +QRKA++N EIQQLKSKMRDSQ+QKFRDELKNRSRVLK LGHIDADGV+QLKGRAACLI
Sbjct: 782  WYQRKADLNSEIQQLKSKMRDSQLQKFRDELKNRSRVLKMLGHIDADGVLQLKGRAACLI 841

Query: 793  DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            DTGDELL+TELMFNGTFNDLDHHQVA+LASCF+P DKSSEQI LR EL++P+ QLQE+AR
Sbjct: 842  DTGDELLITELMFNGTFNDLDHHQVASLASCFVPCDKSSEQIRLRNELSRPMTQLQEAAR 901

Query: 853  KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            KIAE+Q ECKLEVNV+EYVEST RP+LMDVIYCWS+GATFAEV++MTDIFEGS+IR ARR
Sbjct: 902  KIAEVQKECKLEVNVEEYVESTCRPYLMDVIYCWSRGATFAEVMEMTDIFEGSVIRLARR 961

Query: 913  LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            LDEFLNQLRAAA+AVGEVNLEKKF  ASESLRRGIMFSNSLYL
Sbjct: 962  LDEFLNQLRAAAEAVGEVNLEKKFEKASESLRRGIMFSNSLYL 1004


>gi|115484445|ref|NP_001065884.1| Os11g0176200 [Oryza sativa Japonica Group]
 gi|62733691|gb|AAX95802.1| HUA enhancer 2 [Oryza sativa Japonica Group]
 gi|77548918|gb|ABA91715.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
            Japonica Group]
 gi|113644588|dbj|BAF27729.1| Os11g0176200 [Oryza sativa Japonica Group]
 gi|218185351|gb|EEC67778.1| hypothetical protein OsI_35316 [Oryza sativa Indica Group]
 gi|222615614|gb|EEE51746.1| hypothetical protein OsJ_33162 [Oryza sativa Japonica Group]
          Length = 1003

 Score = 1555 bits (4026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 766/1004 (76%), Positives = 864/1004 (86%), Gaps = 50/1004 (4%)

Query: 1    MEESLMAGKRKAPEEDL-------HVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKD 53
            MEE     KRKAPE +        H    P  ++  K+RNL+RSC+HEVAVP GYA  KD
Sbjct: 1    MEEVENTSKRKAPESEHAAAVSGEHPPPPPPPDAAAKRRNLSRSCIHEVAVPKGYAAAKD 60

Query: 54   EAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIA 113
            EA+HGT ++P ++GEMAK Y F+LDPFQ VS+ACLERNESVLVSAHTSAGKTA+AEYAIA
Sbjct: 61   EAVHGTLSSPAFHGEMAKAYPFQLDPFQSVSIACLERNESVLVSAHTSAGKTAIAEYAIA 120

Query: 114  MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGML 173
            M+FRDKQRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTL PNA+CLVMTTEILR ML
Sbjct: 121  MSFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLQPNATCLVMTTEILRAML 180

Query: 174  YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
            YRGSEV+KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWI
Sbjct: 181  YRGSEVIKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWI 240

Query: 234  CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ--K 291
            C+LHKQPCHVVYTDFRPTPLQHYVFP+GGSGLYLVVDE  QFREDNF+KLQDTF KQ  +
Sbjct: 241  CNLHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDEDGQFREDNFLKLQDTFTKQSNQ 300

Query: 292  IGGRRENG-KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
            + GR+  G KASGR+AKGGS SG SDI++IVKMIMERKFQPVI+FSFSRRECE HAMSMS
Sbjct: 301  VDGRKGGGPKASGRIAKGGSASGNSDIYRIVKMIMERKFQPVIIFSFSRRECEHHAMSMS 360

Query: 351  KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
            KLDFNT EEKD +EQVF +A+ CL+EEDR LPAIELMLPLLKRGIAVHHSGLLP+IKELV
Sbjct: 361  KLDFNTDEEKDNIEQVFSSAILCLSEEDRGLPAIELMLPLLKRGIAVHHSGLLPLIKELV 420

Query: 411  ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
            ELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGD++RYI SGEYIQMSGRAGRR
Sbjct: 421  ELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDTNRYIASGEYIQMSGRAGRR 480

Query: 471  GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
            GKD RGIC+IM+DE+MEM+ +KDMVLGKPAPLVSTFRLSYY+ILNLMSR EGQFTAEHVI
Sbjct: 481  GKDIRGICVIMIDEKMEMSVIKDMVLGKPAPLVSTFRLSYYTILNLMSRVEGQFTAEHVI 540

Query: 531  KNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEIT 590
            +NSFHQFQYEKALP++ +K++ LE EA  LD+SGE ++AEYHKL LDI++LEKK+MSE+ 
Sbjct: 541  RNSFHQFQYEKALPEVVQKITSLENEATLLDSSGETDLAEYHKLGLDISELEKKIMSEMI 600

Query: 591  RPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI---- 641
            RPER L YL  GRL+KVR+G TDWGWGVVVNVVKKP    GTLP     SRG  YI    
Sbjct: 601  RPERALLYLVPGRLVKVRDGSTDWGWGVVVNVVKKPPQS-GTLPPALSASRGNNYIVDTL 659

Query: 642  -----------------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSI 672
                                         VPV LPL+S LS +R+++PPDLRP +ARQ+I
Sbjct: 660  LHCSSSSNENGSRSKPLPPRPGEKGEMHVVPVPLPLLSGLSSVRINIPPDLRPPEARQNI 719

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQI 731
            L AVQEL  R+PQGLPKL+P+KDM +++PE+V+LV+++++LE KL +HPL+KS Q E Q+
Sbjct: 720  LFAVQELGKRYPQGLPKLDPIKDMGLQEPELVELVHKLDDLEQKLCSHPLHKSDQSEQQL 779

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
              +QRKAE+NHEIQ LKSKMRDSQ+QKFRDEL+NRSRVLK LGHIDADGV+QLKGRAACL
Sbjct: 780  SWYQRKAELNHEIQMLKSKMRDSQLQKFRDELRNRSRVLKMLGHIDADGVLQLKGRAACL 839

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            IDTGDELL+TELMFNGTFNDLDHHQVA+LASCFIP +KSSEQI LR EL+ P+ QLQE+A
Sbjct: 840  IDTGDELLITELMFNGTFNDLDHHQVASLASCFIPCEKSSEQIRLRSELSTPMMQLQEAA 899

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            RKIAE+Q ECKLEVNV+EYVEST RP+LMDVIYCWSKGATF EVI+MTDIFEGSIIR AR
Sbjct: 900  RKIAEVQKECKLEVNVEEYVESTCRPYLMDVIYCWSKGATFGEVIEMTDIFEGSIIRLAR 959

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDEFLNQL+AAAQAVGEVNLE KF AAS+SLRRGIMF+NSLYL
Sbjct: 960  RLDEFLNQLKAAAQAVGEVNLENKFGAASDSLRRGIMFANSLYL 1003


>gi|357157387|ref|XP_003577781.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Brachypodium distachyon]
          Length = 1005

 Score = 1541 bits (3989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 760/1006 (75%), Positives = 863/1006 (85%), Gaps = 52/1006 (5%)

Query: 1    MEESLMAGKRKAPEEDLH----VTGTPEEE-----STKKQRNLTRSCVHEVAVPSGYALT 51
            MEE   + KRKA E DL         P+E+     S  K+ NL RSC+HEVAVP+GY L+
Sbjct: 1    MEEVENSSKRKASELDLEDDSAAAAVPDEQPPRPDSAAKRPNLARSCIHEVAVPTGYDLS 60

Query: 52   KDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYA 111
             DEA+HGT +NP +NGEMAKTY F+LDPFQ VS+ACLERNESVLVSAHTSAGKTA+AEYA
Sbjct: 61   MDEAVHGTLSNPAFNGEMAKTYPFQLDPFQSVSIACLERNESVLVSAHTSAGKTAIAEYA 120

Query: 112  IAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRG 171
            IAM+FRDKQRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTL PNA+CLVMTTEILR 
Sbjct: 121  IAMSFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLQPNATCLVMTTEILRA 180

Query: 172  MLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAE 231
            MLYRGSEV+KEV WVIFDEIHYMKDRERGVVWEESI+FLP AIKMVFLSATMSNAT+FAE
Sbjct: 181  MLYRGSEVIKEVGWVIFDEIHYMKDRERGVVWEESIVFLPTAIKMVFLSATMSNATEFAE 240

Query: 232  WICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ- 290
            WIC+LHKQPCHVVYTDFRPTPLQHYVFP+GGSGLYLVVDE  QFREDNF+KLQDTF KQ 
Sbjct: 241  WICNLHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENGQFREDNFLKLQDTFAKQP 300

Query: 291  -KIGGRRENG-KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS 348
             +  GR   G KASGR+AKGG  SG SDI++IVKMIMERKFQPVI+FSFSRRECE HAMS
Sbjct: 301  SQQDGRNGGGPKASGRIAKGGKASGTSDIYRIVKMIMERKFQPVIIFSFSRRECEHHAMS 360

Query: 349  MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
            MSKLDFNT+EEKD +EQVF++A+ CL+EEDR LPAIELMLPLLKRGIAVHHSGLLP+IKE
Sbjct: 361  MSKLDFNTEEEKDNIEQVFRSAIFCLSEEDRGLPAIELMLPLLKRGIAVHHSGLLPLIKE 420

Query: 409  LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
            LVELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGDS+RYI SGEYIQMSGRAG
Sbjct: 421  LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSNRYIASGEYIQMSGRAG 480

Query: 469  RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
            RRGKD+RGIC+IM+DE+MEM+ +KDMVLGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEH
Sbjct: 481  RRGKDERGICVIMIDEKMEMSVIKDMVLGKPAPLISTFRLSYYTILNLLSRAEGQFTAEH 540

Query: 529  VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSE 588
            VI+NSFHQFQYEKALP++ +K+++LE EA  LD+SGE ++ EYHKL LDI++LEKK+MSE
Sbjct: 541  VIRNSFHQFQYEKALPEVVQKITRLENEATLLDSSGENDLGEYHKLGLDISELEKKIMSE 600

Query: 589  ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI-- 641
            + RPER L YL  GRL+KVR+G TDWGWGVVVNVVKKP A   TLP     SR   YI  
Sbjct: 601  MIRPERALLYLVPGRLVKVRDGSTDWGWGVVVNVVKKPPAS-STLPPALSASRSNSYIVD 659

Query: 642  -------------------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQ 670
                                           VPV LPL+S LS +R+++PPDLRP +ARQ
Sbjct: 660  TLLHCSSSSSENGSRSKPCPPRPGEKGEMHVVPVPLPLVSGLSSVRINIPPDLRPPEARQ 719

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDEN 729
            +IL AVQEL  R+PQGLPKL+P+ DM IE+PE+VDLV+++E+LE KL +HPL+KS Q+E 
Sbjct: 720  NILFAVQELGKRYPQGLPKLHPITDMGIEEPELVDLVHKLEDLEQKLCSHPLHKSDQNEQ 779

Query: 730  QIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAA 789
            Q+  +QRKAE+NHEIQQLKSKMRDSQ+QKFRDELKNRSRVLK LGHID DGV+QLKGRAA
Sbjct: 780  QLSWYQRKAELNHEIQQLKSKMRDSQLQKFRDELKNRSRVLKMLGHIDGDGVLQLKGRAA 839

Query: 790  CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            CLIDTGDELL+TELMFNGTFNDLDHHQVA++ SCF+P +KS+EQI LR EL+KP+ QLQE
Sbjct: 840  CLIDTGDELLITELMFNGTFNDLDHHQVASVVSCFVPCEKSNEQIRLRNELSKPMMQLQE 899

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRS 909
            +ARKIAE+Q ECKL+VNV+EYVEST +P+LMDVIYCWSKGATF EVI+MTDIFEGSIIR 
Sbjct: 900  AARKIAEVQRECKLDVNVEEYVESTCKPYLMDVIYCWSKGATFGEVIEMTDIFEGSIIRL 959

Query: 910  ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             RRLDEFLNQL+AAA+AVGEVNLE KF +ASESLRRGIMF+NSLYL
Sbjct: 960  VRRLDEFLNQLKAAAEAVGEVNLENKFGSASESLRRGIMFANSLYL 1005


>gi|326502430|dbj|BAJ95278.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1004

 Score = 1537 bits (3979), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 755/1004 (75%), Positives = 863/1004 (85%), Gaps = 49/1004 (4%)

Query: 1    MEESLMAGKRKAPE---EDLHVTGTPEEEST-----KKQRNLTRSCVHEVAVPSGYALTK 52
            MEE     KRKAPE   ED       + + +      K++NL+R+C+HEVA PSGY L+K
Sbjct: 1    MEEVENTSKRKAPELDSEDSSAAAVLDGQQSLPGLAAKRQNLSRTCIHEVAAPSGYDLSK 60

Query: 53   DEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAI 112
            DEA+HGT +NPV+NG+MAKTY F+LDPFQ VS+ACLERNESVLVSAHTSAGKTAVAEYAI
Sbjct: 61   DEAVHGTLSNPVFNGKMAKTYPFQLDPFQSVSIACLERNESVLVSAHTSAGKTAVAEYAI 120

Query: 113  AMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGM 172
            AM+FRDKQRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTL PNA+CLVMTTEILR M
Sbjct: 121  AMSFRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLQPNATCLVMTTEILRAM 180

Query: 173  LYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEW 232
            LYRGSEV+KEV WVIFDEIHYMKDRERGVVWEESI+FLPPAIKMVFLSATMSNAT+FAEW
Sbjct: 181  LYRGSEVIKEVGWVIFDEIHYMKDRERGVVWEESIVFLPPAIKMVFLSATMSNATEFAEW 240

Query: 233  ICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ-- 290
            IC+LHKQPCHVVYTDFRPTPLQHYVFP+GGSGLYLVVDE  QFREDNF+KLQDTF KQ  
Sbjct: 241  ICNLHKQPCHVVYTDFRPTPLQHYVFPIGGSGLYLVVDENGQFREDNFLKLQDTFAKQPS 300

Query: 291  KIGGRRENG-KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
            ++ G++  G KASGR+AKGG+ SG SDI++IVKMIMERKFQPVI+FSFSRRECE HAMSM
Sbjct: 301  QLDGKKSGGPKASGRIAKGGNASGTSDIYRIVKMIMERKFQPVIIFSFSRRECEHHAMSM 360

Query: 350  SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
            SKLDFNT+EEKD++EQVF++A+ CL+EEDR LPAIELMLPLLKRGIAVHHSGLLP+IKEL
Sbjct: 361  SKLDFNTEEEKDSIEQVFRSAIFCLSEEDRGLPAIELMLPLLKRGIAVHHSGLLPIIKEL 420

Query: 410  VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
            VELLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGDS+R+IGSGEYIQMSGRAGR
Sbjct: 421  VELLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSNRFIGSGEYIQMSGRAGR 480

Query: 470  RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
            RGKD+RGIC+IM+DE+MEM+ +KDMVLGKPAPL+STFRLSYY+ILNL+SRAEGQFTAEHV
Sbjct: 481  RGKDERGICVIMIDEKMEMSVIKDMVLGKPAPLISTFRLSYYTILNLLSRAEGQFTAEHV 540

Query: 530  IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEI 589
            I+NSFHQFQYEKALP++ +K+++LE EA+ L +SGE ++AEYHKL LDI++LEKK+MSE+
Sbjct: 541  IRNSFHQFQYEKALPEVVQKITRLENEASLLGSSGENDLAEYHKLGLDISELEKKIMSEM 600

Query: 590  TRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP----SRGGGYI---- 641
             RPER L YL  GRL+KVR+G TDWGWGVVVNVVKKP A     P    SR   YI    
Sbjct: 601  IRPERALLYLVPGRLVKVRDGSTDWGWGVVVNVVKKPPASSSLPPALSASRNNNYIVDTL 660

Query: 642  -----------------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQSI 672
                                         VPV  PL+  LS IR+S+P DLRP +ARQ+I
Sbjct: 661  LHCSSSSSESGLRSKPCPPRAGEKGEMHVVPVPSPLVCGLSSIRISIPSDLRPPEARQNI 720

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQI 731
            L AV EL  R+PQGLPKL+P+ DM IE+PE+VDLV+++E+LE KL +HPL+KS Q E Q+
Sbjct: 721  LFAVHELGKRYPQGLPKLHPITDMGIEEPELVDLVHKLEDLEQKLCSHPLHKSDQSEQQL 780

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
              +QRKAE+NHEIQQLKSKMRDSQ+QKFRDELKNRSRVLK LGHIDADGV+QLKGRAACL
Sbjct: 781  SWYQRKAELNHEIQQLKSKMRDSQLQKFRDELKNRSRVLKMLGHIDADGVLQLKGRAACL 840

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            IDTGDELL+TELMFNGTFNDLDHHQVA++ SCF+P +KSSEQI LR EL+KP+ QLQE+A
Sbjct: 841  IDTGDELLITELMFNGTFNDLDHHQVASVVSCFVPCEKSSEQIRLRNELSKPMIQLQEAA 900

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            RKIAE+Q ECKL+VNV+EYVEST +P+LMDVIYCWSKGATF EV +MTDIFEGSIIR  R
Sbjct: 901  RKIAEVQRECKLDVNVEEYVESTCKPYLMDVIYCWSKGATFGEVTEMTDIFEGSIIRLVR 960

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDEFLNQL+AAA+AVGEVNLE KF +ASESL RGIMF+NSLYL
Sbjct: 961  RLDEFLNQLKAAAEAVGEVNLESKFGSASESLHRGIMFANSLYL 1004


>gi|413947563|gb|AFW80212.1| hypothetical protein ZEAMMB73_030566 [Zea mays]
          Length = 979

 Score = 1485 bits (3844), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 733/976 (75%), Positives = 837/976 (85%), Gaps = 50/976 (5%)

Query: 2   EESLMAGKRKAP----EEDLHVTGTPEE---ESTKKQRNLTRSCVHEVAVPSGYALTKDE 54
           EE+    KRKAP    EE   +   P +   +   K+ N++RSCVHEVAVP+GY   KDE
Sbjct: 3   EEAESNCKRKAPDSSVEEQPSLAPAPAQSQADPAAKRPNISRSCVHEVAVPNGYESVKDE 62

Query: 55  AIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAM 114
           A+HGT A+P +NGEMAK Y F+LDPFQ VS+ACLERNESVLVSAHTSAGKT VAEYAIAM
Sbjct: 63  AVHGTLASPAFNGEMAKQYPFKLDPFQSVSIACLERNESVLVSAHTSAGKTVVAEYAIAM 122

Query: 115 AFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLY 174
           AFRDKQRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTL PNA+CLVMTTEILR MLY
Sbjct: 123 AFRDKQRVIYTSPLKALSNQKYRELSQEFTDVGLMTGDVTLHPNATCLVMTTEILRAMLY 182

Query: 175 RGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWIC 234
           RGSEV+KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC
Sbjct: 183 RGSEVIKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWIC 242

Query: 235 HLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--QKI 292
            LHKQPCHVVYTDFRPTPLQHY+FP+GGSGLYLVVDE  QFREDNF KLQD+F K   ++
Sbjct: 243 SLHKQPCHVVYTDFRPTPLQHYMFPIGGSGLYLVVDENGQFREDNFAKLQDSFAKPNNQL 302

Query: 293 GGRRENG-KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
            GR+  G KASGR+AKGGS SG SDI++IVKMIMERKFQPVI+FSFSRRECE HAMSMSK
Sbjct: 303 DGRKGGGPKASGRIAKGGSASGNSDIYRIVKMIMERKFQPVIIFSFSRRECEHHAMSMSK 362

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           LDF+T+EEK+ +EQVF NA+ CL EEDR+LPAIELMLPLLKRGIAVHHSGLLP+IKELVE
Sbjct: 363 LDFSTEEEKECIEQVFCNAIGCLVEEDRSLPAIELMLPLLKRGIAVHHSGLLPIIKELVE 422

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           LLFQEGLVKALFATETFAMGLNMPAKTVVFT+VKKWDGDS+RYIGSGEYIQMSGRAGRRG
Sbjct: 423 LLFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSNRYIGSGEYIQMSGRAGRRG 482

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
           KD+RGIC+IM+DE+MEM+ +KDMVLGKPAPLVSTFRLSYY+ILNLMSR EGQFTAEHVI+
Sbjct: 483 KDERGICVIMIDEKMEMSVIKDMVLGKPAPLVSTFRLSYYTILNLMSRVEGQFTAEHVIR 542

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
           +SFH+FQYEKALP+I +K+++LE EA  LD+SGE ++AEYHKL LDI++LEKK+MSE+ R
Sbjct: 543 HSFHEFQYEKALPEIAQKITRLENEATLLDSSGETDLAEYHKLGLDISELEKKIMSEMIR 602

Query: 592 PERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGY------ 640
           PER L YL  GRL++VR+G TDWGWGVVVNVVKKP A  GTLP     SR   Y      
Sbjct: 603 PERALLYLVPGRLVRVRDGSTDWGWGVVVNVVKKPPAS-GTLPPALSASRSNNYTVDTLL 661

Query: 641 ---------------------------IVPVQLPLISTLSKIRLSVPPDLRPLDARQSIL 673
                                      +VPV LPL+S LS +R+++PPDLRP +ARQ+IL
Sbjct: 662 HCSSNSSENGSRSKPCPPRPGEKGEMHVVPVPLPLVSGLSSVRINIPPDLRPPEARQNIL 721

Query: 674 LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIR 732
            AVQEL  R+PQGLPKL+P+ DM I++PE+VDLV+++E+LE K  +H L+KS Q E ++ 
Sbjct: 722 SAVQELGKRYPQGLPKLHPINDMGIQEPELVDLVHKLEDLEQKQCSHRLHKSGQSEQELS 781

Query: 733 CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
            +Q+KA++N EIQQLKSKMRDSQ+QKFRDEL+NRSRVLK LGHIDADGV+QLKGRAACLI
Sbjct: 782 WYQKKADLNTEIQQLKSKMRDSQLQKFRDELRNRSRVLKMLGHIDADGVLQLKGRAACLI 841

Query: 793 DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
           DTGDELL+TELMFNGTFNDLDHHQVA+LASCF+P DKSSEQI LR EL++P+ QLQE+AR
Sbjct: 842 DTGDELLITELMFNGTFNDLDHHQVASLASCFVPCDKSSEQIRLRNELSRPMMQLQEAAR 901

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           KIAE+Q ECKLEVNV+EYVEST RP+LMDVIYCWS+GATFAEV++MTDIFEGS+IR ARR
Sbjct: 902 KIAEVQRECKLEVNVEEYVESTCRPYLMDVIYCWSRGATFAEVMEMTDIFEGSVIRLARR 961

Query: 913 LDEFLNQLRAAAQAVG 928
           LDEFLNQLRAAA+AVG
Sbjct: 962 LDEFLNQLRAAAEAVG 977


>gi|449527177|ref|XP_004170589.1| PREDICTED: superkiller viralicidic activity 2-like 2-like, partial
           [Cucumis sativus]
          Length = 865

 Score = 1432 bits (3708), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 699/865 (80%), Positives = 761/865 (87%), Gaps = 59/865 (6%)

Query: 1   MEESLMAGKRKAPEEDLHV--TG----------------------TPEEESTKKQRNLTR 36
           MEES + GKRK  EE+  V  TG                      TP +E+   +R+LTR
Sbjct: 1   MEESPILGKRKDSEEESAVAETGNTQETSSSKRPKESKNLEDEKTTPSQETVSNRRSLTR 60

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +CVHEVAVP GY+ TKDE++HGT  NPVYNG MAKTY F LDPFQ+VSV+CLERNES+LV
Sbjct: 61  TCVHEVAVPVGYSSTKDESVHGTLPNPVYNGTMAKTYPFTLDPFQQVSVSCLERNESILV 120

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL QEFKDVGLMTGDVTLS
Sbjct: 121 SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELSQEFKDVGLMTGDVTLS 180

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM+DRERGVVWEESIIFLPPAIKM
Sbjct: 181 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMRDRERGVVWEESIIFLPPAIKM 240

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSATMSNAT+FAEWIC++HKQPCHVVYTDFRPTPLQHYVFP GG+GLYLVVDE EQFR
Sbjct: 241 VFLSATMSNATEFAEWICYIHKQPCHVVYTDFRPTPLQHYVFPAGGNGLYLVVDENEQFR 300

Query: 277 EDNFVKLQDTFLKQK--IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
           EDNF+KLQDTF KQK  +G R  NGK+SGR+AKGGS SGGSDI+KIVKMIMER FQPVIV
Sbjct: 301 EDNFLKLQDTFAKQKQIVGHRTANGKSSGRIAKGGSASGGSDIYKIVKMIMERNFQPVIV 360

Query: 335 FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           FSFSRRECEQHAMSMSKLDFNTQEEKD VE +F+NA+ CLNEEDR LPAIELMLPLL+RG
Sbjct: 361 FSFSRRECEQHAMSMSKLDFNTQEEKDMVEHIFRNAILCLNEEDRELPAIELMLPLLQRG 420

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA KKWDGDSHR+
Sbjct: 421 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAFKKWDGDSHRF 480

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
           IGSGEYIQMSGRAGRRGKD+RGICIIM+DEQMEM T+KDM+LGKPAPLVSTFRLSYYSIL
Sbjct: 481 IGSGEYIQMSGRAGRRGKDERGICIIMIDEQMEMGTIKDMILGKPAPLVSTFRLSYYSIL 540

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
           NLMSRAEGQFTAEHVI++SFHQFQ+EKALPDIGK+VSKLEEEAA+LDASGEAEVAEYHKL
Sbjct: 541 NLMSRAEGQFTAEHVIRHSFHQFQHEKALPDIGKRVSKLEEEAATLDASGEAEVAEYHKL 600

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           KLDIAQLEKK+MSEITRPERVLY+L  GRL+KVREGGTDWGWGVVVNVVKKPSAG+G LP
Sbjct: 601 KLDIAQLEKKMMSEITRPERVLYFLLPGRLVKVREGGTDWGWGVVVNVVKKPSAGLGILP 660

Query: 635 SRGGGYI---------------------------------VPVQLPLISTLSKIRLSVPP 661
           SRGG YI                                 VPVQLPLIS LSK+R+S+P 
Sbjct: 661 SRGGAYIVDTLLQCSPCLSENSSRPKPCPPHPGEKGEMHVVPVQLPLISALSKLRISIPS 720

Query: 662 DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
           DLRP++AR+SILLA++EL +RFPQG PKLNPVKDM IEDPE+V+LV QIEELE KL+AHP
Sbjct: 721 DLRPVEARESILLALEELGTRFPQGFPKLNPVKDMNIEDPEIVELVKQIEELERKLYAHP 780

Query: 722 LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
           L+KS++ +Q++CFQRKAEVNHEIQ LK+KMRDSQ+QKFRDELKNRSRVLKKLGH+DADGV
Sbjct: 781 LHKSREVDQMKCFQRKAEVNHEIQILKNKMRDSQLQKFRDELKNRSRVLKKLGHVDADGV 840

Query: 782 VQLKGRAACLIDTGDELLVTELMFN 806
           VQLKGRAACLIDTGDELLVTELMFN
Sbjct: 841 VQLKGRAACLIDTGDELLVTELMFN 865


>gi|168020938|ref|XP_001762999.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685811|gb|EDQ72204.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1016

 Score = 1372 bits (3551), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 662/1006 (65%), Positives = 806/1006 (80%), Gaps = 59/1006 (5%)

Query: 8    GKRKAPE--EDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVY 65
             KRK PE   +     T EE    K+R++ RSC+HEVA+P G+  +KDE+IHGT  NPVY
Sbjct: 12   AKRKNPEPVTNGAAQATDEEAPEAKRRSVIRSCIHEVALPPGFTPSKDESIHGTIDNPVY 71

Query: 66   NGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYT 125
             G  AK+Y F LDPFQ +SVACLER+ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYT
Sbjct: 72   TGPRAKSYPFTLDPFQEISVACLERDESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYT 131

Query: 126  SPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            SPLKALSNQK+REL +EF DVGLMTGDVT+SPNASC+VMTTEILRGMLY+GSEVL+EVAW
Sbjct: 132  SPLKALSNQKFRELSEEFTDVGLMTGDVTISPNASCIVMTTEILRGMLYKGSEVLREVAW 191

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDEIHYM+DRERGVVWEESIIFLPPAIKMVFLSATMSNAT+FAEWIC+LHKQPCHVVY
Sbjct: 192  VIFDEIHYMRDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPCHVVY 251

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            TDFRPTPLQHY FP+GGSGLYLVVDEK  F+E+NF KL+ TF ++++GG   +  ++   
Sbjct: 252  TDFRPTPLQHYAFPMGGSGLYLVVDEKGDFKEENFNKLKATFERKEVGGNEIDPPSTRGG 311

Query: 306  AKGGSGS-----------------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS 348
              G                        DI KIVKMIMERKFQPVIVFSFSRRECEQ+A +
Sbjct: 312  RGGRGARGRGVGGRGGRGGDKGSGSSQDIGKIVKMIMERKFQPVIVFSFSRRECEQYATA 371

Query: 349  MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
            MSKLDFN  EEK+ VE +F+ A++ L+EEDR+LPAI+L+LPLLKRGI VHHSGLLP++KE
Sbjct: 372  MSKLDFNNDEEKEAVEDIFKKAIEVLSEEDRSLPAIDLLLPLLKRGIGVHHSGLLPILKE 431

Query: 409  LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
            +VEL+FQEGL KALFATETFAMGLNMPAKTVVFT V+KWDG SHR++ SGEYIQMSGRAG
Sbjct: 432  VVELMFQEGLCKALFATETFAMGLNMPAKTVVFTNVRKWDGQSHRWMSSGEYIQMSGRAG 491

Query: 469  RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
            RRGKD RGICIIM+D QMEM T ++M+ G  APLVSTFRLSYYS+LNLMSRAEGQF +EH
Sbjct: 492  RRGKDLRGICIIMIDSQMEMKTCQEMIQGTAAPLVSTFRLSYYSLLNLMSRAEGQFNSEH 551

Query: 529  VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSE 588
            VI++SFHQFQ++KALP + + +  LE E A +D++GE+ +AEYH L+L +AQLEKK+M+E
Sbjct: 552  VIRHSFHQFQHDKALPKVEENIKTLEAEVAKIDSAGESSMAEYHSLRLKLAQLEKKMMAE 611

Query: 589  ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPS------------- 635
            + RPERVL ++  GRL+K+R+G  +WGWGVVV+VVKKP++  GT+ S             
Sbjct: 612  VLRPERVLLFMKPGRLVKIRDGSDEWGWGVVVHVVKKPTSNQGTISSALATDPASSYIVD 671

Query: 636  -------------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQ 670
                                     +G  ++VPV++PLI  +S +R++ P DLRP +ARQ
Sbjct: 672  ILLHCASGVIQEGKRPRPRPCPPGEKGEMHVVPVRMPLICAISTLRVAAPRDLRPPEARQ 731

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE-N 729
            S+L+AVQELE RFP G PKL+PV+DM I+D + + +V +IE  E KL +HPL +S+ E +
Sbjct: 732  SVLMAVQELERRFPDGFPKLDPVEDMGIDDEDFLKIVKEIEVEEKKLVSHPLFQSEKEAD 791

Query: 730  QIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAA 789
                FQRKAE+  EI  LK +MR+SQ+QKFR+ELKNRSRVLK+LGHI+ DGVVQ KGRAA
Sbjct: 792  CFASFQRKAELMVEIDALKLRMRESQLQKFREELKNRSRVLKRLGHINGDGVVQTKGRAA 851

Query: 790  CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            CLIDT DELLVTELMFNG FND+DHHQV A+ASCF+PV+KS+EQ+ L  ELA PL++L+E
Sbjct: 852  CLIDTADELLVTELMFNGLFNDIDHHQVVAIASCFLPVEKSNEQVRLTNELAHPLEKLKE 911

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRS 909
            +A+++AEIQ ECKLE++V+EY ES  +P+LMDVIY WSKG++F+E+ +MTDIFEGSIIR+
Sbjct: 912  TAKQLAEIQKECKLEIDVEEYAES-FKPYLMDVIYSWSKGSSFSEICEMTDIFEGSIIRA 970

Query: 910  ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ARRLDEFLNQLR+AAQA+G  +LE KFA  SES+RRGI+F+NSLY+
Sbjct: 971  ARRLDEFLNQLRSAAQAIGNPDLENKFALGSESIRRGIVFANSLYI 1016


>gi|302760191|ref|XP_002963518.1| hypothetical protein SELMODRAFT_79650 [Selaginella moellendorffii]
 gi|302799609|ref|XP_002981563.1| hypothetical protein SELMODRAFT_268485 [Selaginella moellendorffii]
 gi|300150729|gb|EFJ17378.1| hypothetical protein SELMODRAFT_268485 [Selaginella moellendorffii]
 gi|300168786|gb|EFJ35389.1| hypothetical protein SELMODRAFT_79650 [Selaginella moellendorffii]
          Length = 970

 Score = 1357 bits (3513), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 645/971 (66%), Positives = 787/971 (81%), Gaps = 51/971 (5%)

Query: 34  LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
           L RSCVHEVAVP+G+    DEA+HG+   PV+ G+ AK+Y FELDPFQ++S+ACLER ES
Sbjct: 2   LGRSCVHEVAVPTGFIAQLDEAVHGSIGEPVFMGDRAKSYPFELDPFQQISIACLERKES 61

Query: 94  VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
           +LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL  EF DVGLMTGDV
Sbjct: 62  LLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELSHEFSDVGLMTGDV 121

Query: 154 TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
           +LSPNA+C+VMTTEILRGMLYRGSEVL+EVAWV+FDEIHYM+DRERGVVWEESII LPPA
Sbjct: 122 SLSPNATCIVMTTEILRGMLYRGSEVLREVAWVVFDEIHYMRDRERGVVWEESIILLPPA 181

Query: 214 IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
           IKMVFLSATMSNAT+FA+WICHLHKQPCHVVYTDFRPTPLQHY F +GGSGLYL+VD+K 
Sbjct: 182 IKMVFLSATMSNATEFAQWICHLHKQPCHVVYTDFRPTPLQHYAFAMGGSGLYLMVDDKG 241

Query: 274 QFREDNFVKLQ---------DTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMI 324
            FR+DNF KLQ         D+             +  GR     S    +DI+KIVKMI
Sbjct: 242 HFRDDNFAKLQQSSRNAGPDDSLAPPGRRRGGGGRRGGGRGGAKASAGVSTDIYKIVKMI 301

Query: 325 MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
           MER  QPVIVFSFSRRECEQ+A+S+SKLDFN+ +EK  VE VF NA+ CL+EEDR+LP I
Sbjct: 302 MERSMQPVIVFSFSRRECEQYALSVSKLDFNSDQEKMDVEHVFSNAIQCLSEEDRSLPPI 361

Query: 385 ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
             +LPLLKRG+A HHSGLLP++KE+VE+LFQEGLVKALFATETFAMGLNMPAKTVVFTA+
Sbjct: 362 HQLLPLLKRGVAFHHSGLLPILKEIVEILFQEGLVKALFATETFAMGLNMPAKTVVFTAL 421

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVS 504
           +KWDGD+HRY+ SGEYIQMSGRAGRRGKD+RGICIIM+D+QM+++T ++M+LGKPAPLVS
Sbjct: 422 RKWDGDAHRYMSSGEYIQMSGRAGRRGKDERGICIIMIDDQMDVSTCREMILGKPAPLVS 481

Query: 505 TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG 564
           TFRLSYYS+LNLMSRAEG F  E+V+K+SFHQFQ+EK +P++  +++KLE+EAA LDA+G
Sbjct: 482 TFRLSYYSLLNLMSRAEGHFDMEYVMKHSFHQFQHEKNVPEMENRINKLEQEAALLDAAG 541

Query: 565 EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK 624
           E  VAEYH+L+L +A+LE++LMSEI RP+R++ +L  GRL+KVR+G  DWGWGVV+NVVK
Sbjct: 542 EETVAEYHRLRLKLAELERQLMSEIIRPDRIIVFLQPGRLVKVRDGADDWGWGVVINVVK 601

Query: 625 KPSAGVGTLPS---------------------------------------RGGGYIVPVQ 645
           KP+ G G LPS                                       +G  ++VPVQ
Sbjct: 602 KPTPG-GPLPSTIVAAPRAASYLVDTLLLCAPGMELDGSRLKPRPCSPGQKGEMHVVPVQ 660

Query: 646 LPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVD 705
           + L+  +S +R++VP DLRP DAR S+L+A+QELE RFP GLP+L+PV+DM+I+DPE+V 
Sbjct: 661 MTLLCAISTLRVAVPTDLRPADARLSVLMAMQELERRFPDGLPRLDPVEDMQIDDPELVS 720

Query: 706 LVNQIEELEHKLFAHPLNKSQDE-NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK 764
           +V QI+E E KL  HPL+KS+ E +    FQ+KAE+  E Q+L+S++RDSQ+ KFR+EL+
Sbjct: 721 IVKQIDEEEKKLVVHPLHKSEKEASHYSAFQKKAELLTEAQRLRSRLRDSQLHKFREELR 780

Query: 765 NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
           NR+RVLK+LGHI+   VVQLKGRAACLIDT DELLV EL+F G FNDLDHHQ+ AL+SCF
Sbjct: 781 NRTRVLKRLGHINELSVVQLKGRAACLIDTADELLVAELIFEGLFNDLDHHQIVALSSCF 840

Query: 825 IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
           +P++KS+EQI+L+ ELA P ++LQ++AR IAE++ ECKLE  V+ YVE   +P+LMDVIY
Sbjct: 841 LPIEKSNEQIHLKAELAWPFRRLQDTARMIAEVERECKLETEVEHYVEK-FQPYLMDVIY 899

Query: 885 CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
            WSKG++FAE+ +MTDIFEGSIIR ARRL+EFLNQLR   QA+G   LEKKF A  ES+R
Sbjct: 900 SWSKGSSFAEICEMTDIFEGSIIRVARRLEEFLNQLRLVFQAIGNGELEKKFEAGIESIR 959

Query: 945 RGIMFSNSLYL 955
           RGIMF+NSLYL
Sbjct: 960 RGIMFANSLYL 970


>gi|357490513|ref|XP_003615544.1| Helicase, putative [Medicago truncatula]
 gi|355516879|gb|AES98502.1| Helicase, putative [Medicago truncatula]
          Length = 967

 Score = 1270 bits (3287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 634/953 (66%), Positives = 771/953 (80%), Gaps = 44/953 (4%)

Query: 29  KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
           KK+R+  R+CVH+VAVP  Y  TKDEA++GT ++P++NG MAKT+ F LD FQ+VS+ACL
Sbjct: 33  KKRRSSERTCVHKVAVPIDYISTKDEALYGTLSSPLHNGTMAKTFPFTLDQFQQVSIACL 92

Query: 89  ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
           ERNESVLVSAHTSAGKTA+AEYAIAM+ RDK++V+YTSPLK+L+NQKY EL QEF DVGL
Sbjct: 93  ERNESVLVSAHTSAGKTAIAEYAIAMSLRDKRKVLYTSPLKSLNNQKYSELRQEFTDVGL 152

Query: 149 MTGDVTLSPN-ASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
           +TGD+T+ P+ A CL+MTTEILRGMLYRGSEVL EV WVIFDEIH MKD ERGVVWEESI
Sbjct: 153 ITGDITIYPSEAKCLIMTTEILRGMLYRGSEVLNEVDWVIFDEIHCMKDGERGVVWEESI 212

Query: 208 IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
           I LPP +KMVFLSAT+SNA +FAEWI  L KQPCHV+ T+FRPTP+QHYVFP+GG  LY 
Sbjct: 213 ILLPPTVKMVFLSATLSNALEFAEWISTLRKQPCHVICTNFRPTPIQHYVFPIGGRRLYP 272

Query: 268 VVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
           +VDE E+F  DNFV  ++TFLKQK+G             +G  G    D+FKIVKMIME+
Sbjct: 273 IVDENEEFMGDNFVMAENTFLKQKLG-------------EGNKG----DMFKIVKMIMEK 315

Query: 328 KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
           KFQP+IVFSFS++ECE +  S+SKLDFNTQEEK+ V  +F+ AV  LNEEDR+L AI+ +
Sbjct: 316 KFQPIIVFSFSKKECEHNLKSISKLDFNTQEEKERVLDIFEMAVLTLNEEDRSLCAIKEV 375

Query: 388 LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
           LP L+RGI +HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF++VKKW
Sbjct: 376 LPHLQRGIGIHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFSSVKKW 435

Query: 448 DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
           DG  HRYI SGEYIQMSGRAGRRGKD+ GICIIM+DEQM  N L+D+VLGKPAPLVSTFR
Sbjct: 436 DGHEHRYIRSGEYIQMSGRAGRRGKDEHGICIIMIDEQMNKNNLEDIVLGKPAPLVSTFR 495

Query: 508 LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
           L Y+SILNLMSRA+GQF+AEH+I NSFHQFQYEK LP++ K+VS LE++ A LDA+ +AE
Sbjct: 496 LRYHSILNLMSRADGQFSAEHLISNSFHQFQYEKTLPEMKKRVSMLEQKLALLDAAEKAE 555

Query: 568 VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV--------- 618
           V+EYHKLKL +A+L++K MS+  RP+ +L +L  GRLIKVRE GTDWGWGV         
Sbjct: 556 VSEYHKLKLKLAELQRK-MSKKIRPDNILPFLCPGRLIKVRERGTDWGWGVVVDVVQEPV 614

Query: 619 ---VVNVVKKPSAGVG----------TLPS-RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
              +V+ +   S G              P  +G  ++VPVQL LI  LS++++S+P D+R
Sbjct: 615 DDYIVDTLLHCSPGSNENSLQLKPCPPFPGEKGEMHVVPVQLTLIYALSQVKISLPHDIR 674

Query: 665 PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
           PL ARQ ILL VQE+  RFPQGLP +NP +D  ++D E+V+LV ++E LE KL  HP++K
Sbjct: 675 PLKARQDILLGVQEICDRFPQGLPTINPAQDNVLKDSEIVELVKEMENLEKKLLDHPMHK 734

Query: 725 SQD--ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            QD  +N I  FQRKA++NHEIQQLK KM+ SQ+QKFR+ELKNRS+VLK+LGHIDAD VV
Sbjct: 735 IQDVEKNNITHFQRKADLNHEIQQLKEKMQYSQLQKFREELKNRSQVLKELGHIDADSVV 794

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
           QLKG+AACLID  D LLVTEL+FNGTFN LDHHQV ALASCF+P+DKSS++I     L +
Sbjct: 795 QLKGKAACLIDMDDVLLVTELLFNGTFNHLDHHQVTALASCFMPIDKSSKKIQPTSLLER 854

Query: 843 PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
           PLQQLQ+SAR+IAEI+ + +L VNV++YV+ST RP +MD I+ WSKG++FA+V QMTDIF
Sbjct: 855 PLQQLQDSARRIAEIECKYRLRVNVNKYVKSTERPVIMDAIHSWSKGSSFADVTQMTDIF 914

Query: 903 EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           EGSII +ARRL  FLNQLRA A+AVGE +L KKF AASES+RRGI+F++SLYL
Sbjct: 915 EGSIITAARRLVGFLNQLRAGAEAVGENDLAKKFTAASESIRRGIIFTDSLYL 967


>gi|147792354|emb|CAN65767.1| hypothetical protein VITISV_043093 [Vitis vinifera]
          Length = 836

 Score = 1092 bits (2824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 526/613 (85%), Positives = 556/613 (90%), Gaps = 16/613 (2%)

Query: 1   MEESLMAGKRKAPEEDLHVTGTP-EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGT 59
           MEES   GKRK P E+  V  TP +EES  K+RNLTR+CVHE AVP GY   KDE++HGT
Sbjct: 39  MEESPTLGKRKLPXENSEVKQTPKQEESASKRRNLTRTCVHEAAVPVGYTSNKDESVHGT 98

Query: 60  FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
            +NPVYNG+MAKTY F LDPFQ+VSVACLERNESVLVSAHTSAGKTAVAEY+IAMAFRDK
Sbjct: 99  LSNPVYNGKMAKTYPFTLDPFQQVSVACLERNESVLVSAHTSAGKTAVAEYSIAMAFRDK 158

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
           QRVIYTSPLKALSNQKYREL QEF DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV
Sbjct: 159 QRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 218

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           LKEVAWVIFDEIHYMKDRERGVVWEESIIFLP AIKMVFLSATMSNAT+FAEWIC+LHKQ
Sbjct: 219 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPTAIKMVFLSATMSNATEFAEWICNLHKQ 278

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK--IGGRRE 297
           PCHVVYTDFRPTPLQHYVFP+ GSGLYLVVDE EQFREDNFVKLQD+F KQK  +G +  
Sbjct: 279 PCHVVYTDFRPTPLQHYVFPIXGSGLYLVVDENEQFREDNFVKLQDSFTKQKQGVGSKSV 338

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           N K SGR+AKGG+ SGGSDIFKIVKMIMERKFQPVI+FSFSRRECEQHAMSMSKLDFNT+
Sbjct: 339 NSKTSGRIAKGGNASGGSDIFKIVKMIMERKFQPVIIFSFSRRECEQHAMSMSKLDFNTK 398

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EEKD VEQVF+NAV CLNEEDRNLPAIELMLPLL+RGIAVHHSGLLP+IKELVELLFQEG
Sbjct: 399 EEKDVVEQVFRNAVLCLNEEDRNLPAIELMLPLLQRGIAVHHSGLLPIIKELVELLFQEG 458

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR+IGSGEYIQMSGRAGRRGKDDRGI
Sbjct: 459 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRFIGSGEYIQMSGRAGRRGKDDRGI 518

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           CIIM+DEQMEMNTL+DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH         
Sbjct: 519 CIIMIDEQMEMNTLRDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH--------- 569

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
               ALPDIGKKVSKLE EAA LDASGEAEVAEYHKL+LDIAQLEKK+MSEITRPERVLY
Sbjct: 570 ----ALPDIGKKVSKLEHEAAMLDASGEAEVAEYHKLRLDIAQLEKKMMSEITRPERVLY 625

Query: 598 YLGSGRLIKVREG 610
           +L  GRL+    G
Sbjct: 626 FLLPGRLVGGENG 638


>gi|384246390|gb|EIE19880.1| HUA enhancer 2 [Coccomyxa subellipsoidea C-169]
          Length = 1020

 Score = 1058 bits (2735), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/979 (54%), Positives = 707/979 (72%), Gaps = 64/979 (6%)

Query: 40   HEVAVPSGY---ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            HEVAVP GY   A   D A+HGT  NP ++G  AK Y F LDPFQ VSVAC+ER ESVLV
Sbjct: 43   HEVAVPKGYDEAAKNLDPALHGTLENPRWSGPRAKEYPFVLDPFQEVSVACIERRESVLV 102

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKTAVAEYAIA+AF++ QRV+YTSPLKALSNQK+REL +EF+DVGLMTGDV+++
Sbjct: 103  SAHTSAGKTAVAEYAIALAFKNNQRVVYTSPLKALSNQKFRELSEEFEDVGLMTGDVSIN 162

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PNA C+VMTTEILR MLYRGSEVL+EVAWV+FDE+HYM+DRERGVVWEE+IIFLPP  KM
Sbjct: 163  PNARCIVMTTEILRSMLYRGSEVLREVAWVVFDEVHYMQDRERGVVWEETIIFLPPETKM 222

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+SNA +FA W+  LHKQPCHVVYTDFRPTPLQHY +  G  GL+LV+DEK  F+
Sbjct: 223  VFLSATLSNAAEFAAWVAALHKQPCHVVYTDFRPTPLQHYAYAPGAKGLFLVLDEKGNFK 282

Query: 277  EDNFVKLQDTFLKQKIGGRRENGK-----------------------ASGRMAKGGSGSG 313
            ++NF KL+     +       +                         + G     G G  
Sbjct: 283  DENFSKLRSEVAPETAADDAPSTSGRGAENGGRGGRGRGRGRNSGGRSGGGRGDKGKGDT 342

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD-------FNTQEEKDTVEQV 366
             + I+KIVKMI +R F+PVIVFSFSRRECE +A ++ K D       FN+ EE++ V  V
Sbjct: 343  AAHIYKIVKMIKDRNFEPVIVFSFSRRECEMYARTLMKPDAKGNAINFNSPEEQEMVGDV 402

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
            F  A+  L+E DR +P +  +L LL+ GIAVHHSGLLP++KE+VELLFQEGL+KALFATE
Sbjct: 403  FAQAIQSLSEADREMPPVVEILKLLRAGIAVHHSGLLPILKEVVELLFQEGLIKALFATE 462

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
            TFAMGLNMPA+TVVFTA++KWDG+++R++ SGEYIQMSGRAGRRGKDDRG+CI+M+D++M
Sbjct: 463  TFAMGLNMPARTVVFTAMEKWDGETNRFMSSGEYIQMSGRAGRRGKDDRGMCIMMIDDKM 522

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF-TAEHVIKNSFHQFQYEKALPD 545
            +  + + +V GKP+PL+S FRL+YY++LN++ RAEG   + E+VI  SF QFQ+E++LP 
Sbjct: 523  DAASCRGIVQGKPSPLLSRFRLTYYTLLNILRRAEGSGQSMEYVIARSFQQFQFERSLPQ 582

Query: 546  IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
            + K++ ++EE AA + A+ +  + EY  LK +I   E+ L   + RPER +++L  GRL+
Sbjct: 583  VQKELREVEERAAQIGAATQEAMDEYQTLKAEIEGAERVLTPALLRPERCMHFLRPGRLV 642

Query: 606  KVREGGTDWGWGVVVNVVKK--PSAGVGTL--------------------PSRGGG---- 639
            +VREG  DWGWG+VV V +K  P   V  L                    P   G     
Sbjct: 643  RVREGPYDWGWGIVVAVHQKGRPKPKVSLLKGTSKLCAIPGQRKERATPMPEPAGRGRPG 702

Query: 640  --YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
               ++PV L L++ +S +R+S+PPDLRP++AR++ L  V+ LE ++P G+P+L+P +D +
Sbjct: 703  EMNVLPVPLQLLTAISTLRISIPPDLRPIEARKATLATVRGLEQQYPNGIPELDPAEDFQ 762

Query: 698  IEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQI 756
            +E+PE +    ++  L+ +L  +P+ +++ DE ++   +R+A +  +   L+ K+ +S +
Sbjct: 763  VEEPEALAAAAKLGSLQARLRRNPVYQAERDEKKMLDVERQAVLAAQAVALRRKLTESHL 822

Query: 757  QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ 816
             KFR E KNR+ VL+KLGH+ A+GVV LKGRAAC I TGDELL TELM NG FN LD HQ
Sbjct: 823  AKFRTEAKNRTAVLRKLGHVTAEGVVSLKGRAACEISTGDELLTTELMLNGVFNSLDVHQ 882

Query: 817  VAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
            + A+ SC +PV+KS+E++ L+ ELA+PL  LQ++AR IAE+Q ECKLEV+ DEYVES  +
Sbjct: 883  LVAVISCLVPVEKSNEEVKLKAELAEPLAALQDTARAIAEVQRECKLEVDPDEYVES-FK 941

Query: 877  PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
            PFLMDVIY WSKG  F +V   TDIFEGSIIR+ RRLDE +N+L AAA  +G+V LE+KF
Sbjct: 942  PFLMDVIYAWSKGEQFVDVCGRTDIFEGSIIRATRRLDELVNELAAAASVIGDVGLEEKF 1001

Query: 937  AAASESLRRGIMFSNSLYL 955
             AA+ ++RR IMF+ SLY+
Sbjct: 1002 RAAAATIRRDIMFAASLYI 1020


>gi|327262837|ref|XP_003216230.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Anolis
            carolinensis]
          Length = 1039

 Score = 1019 bits (2634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 504/951 (52%), Positives = 671/951 (70%), Gaps = 51/951 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P+      DE      A     G+ AK Y F LD FQR ++ C++ N SVLVS
Sbjct: 107  CTHEVALPA------DEDF---IALKPRTGKAAKEYPFILDAFQREAILCVDNNHSVLVS 157

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 158  AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 217

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 218  TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 277

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 278  FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 337

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 338  DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 391

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 392  SKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 451

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K+DG   R+I S
Sbjct: 452  HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSARKFDGKDFRWITS 511

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+MVDE+M  +  K ++ G   PL S F L+Y  +LNL+
Sbjct: 512  GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPSVGKQLLKGSADPLNSAFHLTYNMVLNLL 571

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ+ +A+P + +KV+KLE++   ++   E  V  Y+K++  
Sbjct: 572  -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVTKLEQQYNEIEIPNEENVVIYYKIRQQ 629

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            +A+L K++   I +P+  L +L  GRL+KV+    D+GWGVVVN  KK            
Sbjct: 630  LAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEDDDFGWGVVVNFSKKSNVKPNSGELDP 689

Query: 627  -----------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                             SA     P+    +G   +VPV L L+S +S +RL +P DLRP
Sbjct: 690  LYVVEVLLNCSKESLKNSATEAAKPAKPEEKGEMQVVPVLLHLLSAISSVRLYIPKDLRP 749

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
            LD RQS+L ++QE++ RFP G+P L+P+ DM I+DP +  ++ ++E  EH++++HPL N 
Sbjct: 750  LDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDPGLKKVIQKVEAFEHRMYSHPLHND 809

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
            S  E   +  +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++
Sbjct: 810  SNLETVYKLCERKAQIAVDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEM 869

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL
Sbjct: 870  KGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPL 929

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+QE A++IA++  E KLE+  D Y+ S+ +P LMDV++ W+ GATFA + +MTD+FEG
Sbjct: 930  RQMQECAKRIAKVSAEAKLEIEEDTYL-SSFKPNLMDVVHTWANGATFAHICKMTDVFEG 988

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 989  SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1039


>gi|145350838|ref|XP_001419803.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580035|gb|ABO98096.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1023

 Score = 1017 bits (2630), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/978 (52%), Positives = 675/978 (69%), Gaps = 71/978 (7%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SCVHEVAVP  +             +P Y+G  AK Y FELD FQR + A LERNESVLV
Sbjct: 56   SCVHEVAVPRDWV-----GDVKALRDPRYDGARAKEYPFELDAFQRAATAVLERNESVLV 110

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            +AHTSAGKT VAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL +EF DVGLMTGD +++
Sbjct: 111  AAHTSAGKTVVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELSEEFGDVGLMTGDASIN 170

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PN++C+VMTTE+LR MLYRG +V++EV W++FDE+HYM+DRERGVVWEESIIF P   ++
Sbjct: 171  PNSTCIVMTTEVLRSMLYRGGDVIREVKWIVFDEVHYMRDRERGVVWEESIIFAPKDARL 230

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FA+W+  LH  PCHVVYTD RPTPLQHY FP GGSGL+LVV+E+ QFR
Sbjct: 231  VFLSATLPNALEFAQWVTSLHNHPCHVVYTDHRPTPLQHYAFPKGGSGLHLVVNEQSQFR 290

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS-----------------------GSG 313
             DNF +LQ     Q I    E    SG   +G                            
Sbjct: 291  SDNFARLQ-----QAIADGAEKSGGSGGGGRGRGRGGGRARGGGGGRGGGGGGRGGGSMA 345

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
             +DI +IV+M+ E+ F PVIVFSFSRRECE++A  +SKL+FNT EE + V +V+  A+  
Sbjct: 346  DADILRIVRMVKEKTFFPVIVFSFSRRECEEYAKFVSKLNFNTPEEAEQVREVYNAALLN 405

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L+EEDR L A++ +LPLL+ GI +HHSGLLPV+KEL+E+LF E L+K LFATETFAMGLN
Sbjct: 406  LSEEDRQLTAVQAILPLLEAGIGIHHSGLLPVLKELIEILFGESLIKCLFATETFAMGLN 465

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
            MPA+TV+FTAVKK+DG   R +  GEY QMSGRAGRRGKDDRGICI+M DE+ME + +K+
Sbjct: 466  MPARTVIFTAVKKFDGTDMRVLAPGEYTQMSGRAGRRGKDDRGICIVMCDERMEEHAMKE 525

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            M+LGKP PL S F+LSYYSILNL+ RA G   AE+VI  SFHQFQ+ K LP++  +++++
Sbjct: 526  MILGKPQPLNSEFKLSYYSILNLLKRATGTIDAEYVIARSFHQFQHAKQLPELKARLTEV 585

Query: 554  EEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD 613
            ++EAA + + G  E+ EY KL+ D  + EK ++  + +P   L +  SGRL+++R+G T+
Sbjct: 586  QQEAAKIKSVGSEEIQEYIKLRRDYREAEKVVLRTMLQPANCLRFFTSGRLVRIRDGDTN 645

Query: 614  WGWGVVVNV--VKK----------------PSAGVGTL-PSRGGGY------IVPVQLPL 648
            WGWGVV+ V  VK                 P A  G L P+           IVPV   L
Sbjct: 646  WGWGVVIQVSTVKDAKGGDVHVLDCLLRCGPGAAEGRLAPADAKNLKMNTTEIVPVGTHL 705

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP---QGLPKLNPVKDMKIEDPEVVD 705
            +  +S +R ++P DLR  +AR+S+ +AV+ +  +     Q +P+++PV DM I D   V 
Sbjct: 706  VDAISAMRFTLPGDLRTKEARESVWIAVETVTKKLTEKGQVIPQIHPVDDMGINDVAFVR 765

Query: 706  LVNQIEELEHKLFAH-------PLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
                +  L  K  +H        L +S+   +I   ++K+E+  E  +L+++++ S++ K
Sbjct: 766  TYRSLGALRDKFHSHALYSEADALERSEMTAKIDVIEQKSELLAEASRLETQIQSSELTK 825

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            FRD+L  RSRVLKKLGHID DGVV  KGRAAC IDT DELLVTELMFNG F  L  H++ 
Sbjct: 826  FRDDLSARSRVLKKLGHIDNDGVVLTKGRAACEIDTADELLVTELMFNGVFAGLSPHELV 885

Query: 819  ALASCFIPVDKS--SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
            ALASCF+PV+KS  S        LAKPL+ LQ++AR+I  +Q ECK+++ VD++VES  +
Sbjct: 886  ALASCFMPVEKSNTSNMDKSAKALAKPLKALQDAAREIGNVQKECKIDIEVDDFVES-FK 944

Query: 877  PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
            P +++++YCW+KG  F+E+++ TD+FEG+IIR+ RRLDE + +L  +  AVG+  L KKF
Sbjct: 945  PTMVEIVYCWAKGEPFSEIVKKTDLFEGTIIRAMRRLDELMMELHRSCVAVGDDGLAKKF 1004

Query: 937  AAASESLRRGIMFSNSLY 954
               +ESLR GI+F++SLY
Sbjct: 1005 EQGAESLRHGIVFADSLY 1022


>gi|61098430|ref|NP_001012962.1| superkiller viralicidic activity 2-like 2 [Gallus gallus]
 gi|53126871|emb|CAG30992.1| hypothetical protein RCJMB04_1h14 [Gallus gallus]
          Length = 1029

 Score = 1012 bits (2617), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/951 (52%), Positives = 665/951 (69%), Gaps = 51/951 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P+      DE   G        G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 97   CTHEVALPA------DEKFTGLKPR---TGKPAKEYPFSLDAFQREAILCVDNNQSVLVS 147

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 148  AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 207

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 208  TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 267

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL LVVDE   FRE
Sbjct: 268  FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLRLVVDENGDFRE 327

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 328  DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 381

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 382  SKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 441

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+  K+DG   R+I S
Sbjct: 442  HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSASKFDGKDFRWISS 501

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 502  GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 561

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ+ +A+P + +KV+KLEE+   +    E  V  Y+K++  
Sbjct: 562  -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVNKLEEQYNKIVIPNEENVVIYYKIRQQ 619

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            +A+L K++   I +P+  L +L  GRL+KV+    D+GWGVVVN  KK            
Sbjct: 620  LAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEDDDFGWGVVVNFSKKSNVKPNSGELDP 679

Query: 627  -----------------SAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                             SA     P+R    G   +VPV + L+S +S +RL +P DLRP
Sbjct: 680  LYVVEVLLHCSKESLKNSATEAAKPARPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRP 739

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
            +D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N 
Sbjct: 740  IDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKVEAFEHRMYSHPLHND 799

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
               E   +  +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++
Sbjct: 800  PNLETIYKLCERKAQIAMDIKAAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEM 859

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + S+E   L  +LA PL
Sbjct: 860  KGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSNEMPKLTEQLAGPL 919

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+QE A++IA +  E KLE++ + Y+ S  RP LMDV+Y W+ GA+FA + +MTD+FEG
Sbjct: 920  RQMQECAKRIARVSAEAKLEIDEENYLNS-FRPILMDVVYTWANGASFAHICKMTDVFEG 978

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 979  SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1029


>gi|308807943|ref|XP_003081282.1| HUA enhancer 2 (ISS) [Ostreococcus tauri]
 gi|116059744|emb|CAL55451.1| HUA enhancer 2 (ISS) [Ostreococcus tauri]
          Length = 1033

 Score = 1010 bits (2612), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 508/978 (51%), Positives = 672/978 (68%), Gaps = 72/978 (7%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +CVHEVA P G+    D A      +P + G  AK Y FELD FQRV+V  LERNESVLV
Sbjct: 67   TCVHEVATPPGW--MGDRA---RLMDPRHEGRGAKEYPFELDAFQRVAVGALERNESVLV 121

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            +AHTSAGKT VAEYAIAMAFRDKQRVIYTSPLKALSNQK+REL +EF DVGLMTG+ +++
Sbjct: 122  AAHTSAGKTVVAEYAIAMAFRDKQRVIYTSPLKALSNQKFRELSEEFGDVGLMTGEASIN 181

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PN++C+VMTTE+LR MLYRG +V++EV W++FDE+HYM+DRERGVVWEESIIF P   ++
Sbjct: 182  PNSTCIVMTTEVLRSMLYRGGDVIREVKWIVFDEVHYMRDRERGVVWEESIIFAPKDARL 241

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FA+W+  LH+ PCHVVYTD RPTPLQHY FP GGSGL+LVV+E+ QF+
Sbjct: 242  VFLSATLPNALEFAQWVTSLHRHPCHVVYTDHRPTPLQHYAFPKGGSGLHLVVNEQSQFK 301

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG---------------------- 314
             +NF KL      Q I    E     G     G G G                       
Sbjct: 302  SENFTKLM-----QAIAQSAEKSSGGGDRGGRGRGGGRGGGGRGGGRGGGRGGGGGSGGD 356

Query: 315  SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            +DI +IV+M+ E+ F PVIVFSFSRRECE++A  ++KL+FNT EE + V +V+  A+  L
Sbjct: 357  ADILRIVRMVKEKSFFPVIVFSFSRRECEEYAKHVAKLNFNTPEEAEQVREVYNAALLNL 416

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
            ++EDR L A++ +LPLL+ GI +HHSGLLPV+KEL+E+LF E L+K LFATETFAMGLNM
Sbjct: 417  SQEDRQLTAVKAILPLLEAGIGIHHSGLLPVLKELIEILFGESLIKCLFATETFAMGLNM 476

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
            PA+TV+FTAVKK+DG   R +  GEY QMSGRAGRRGKDDRGICI+M DE+ME   +K+M
Sbjct: 477  PARTVIFTAVKKFDGSDMRVLAPGEYTQMSGRAGRRGKDDRGICIVMCDERMEEQAMKEM 536

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            +LG+P PL S F+LSYYSILNL+ RA G   AE+VI  SFHQFQ+ K LP++  K++ ++
Sbjct: 537  ILGEPQPLNSEFKLSYYSILNLLKRATGTVDAEYVISRSFHQFQHAKQLPEMKAKLADVQ 596

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
              A+ + A    E+ EY KL+ D  + EK +M  +  P   L +  SGRLI++R+G T+W
Sbjct: 597  NRASKIKAVDSKEIQEYVKLRRDYREAEKSVMMTMLEPSNCLRFFTSGRLIRIRDGDTNW 656

Query: 615  GWGVVVNVVK------------------KPSAGVGTL-------PSRGGGYIVPVQLPLI 649
            GWG VV+V+                    P A  G L       P      I+PV L L+
Sbjct: 657  GWGAVVHVLTVEGANGENTYVLDCLLRCGPGAAEGNLVPADAQNPKYNSTEIIPVGLHLV 716

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ---GLPKLNPVKDMKIEDPEVVDL 706
              +S +RL++P DLR  +AR+S+ LAV+ +  +  +    +P ++P++DMKI D   V  
Sbjct: 717  DAISAMRLTLPDDLRSKEARESVWLAVETVTKKLTEKGKDIPLIDPIEDMKINDVAFVRK 776

Query: 707  VNQIEELEHKLFAHPLNKSQD--EN-----QIRCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
               +  L  +  +H L    D  EN     +I  F+ KA +  +   LK K+  S++ KF
Sbjct: 777  YRSLGSLRAEFQSHSLYSEADARENSELTAKINIFEEKANLLAQASDLKQKITSSELTKF 836

Query: 760  RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
            RD+L  RSRVLKKLGHIDADGVV  KGRAAC IDT DELLVTELMFNG F  L  H + A
Sbjct: 837  RDDLSARSRVLKKLGHIDADGVVLTKGRAACEIDTADELLVTELMFNGVFAGLHPHALVA 896

Query: 820  LASCFIPVDKSSEQINL---RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
            LASCF+PV+KS+   N+      L+KPL+ LQE+AR+I  +Q ECK+E++VDE+V+S  +
Sbjct: 897  LASCFMPVEKSN-STNMDKSSKALSKPLKALQEAAREIGNVQKECKIEIDVDEFVDS-FK 954

Query: 877  PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
            P +++++YCW++G  F+E+++ TD+FEG+IIR+ RRLDE + +L  ++ AVG+ +L KKF
Sbjct: 955  PTMVEIVYCWAQGEPFSEIVKKTDLFEGTIIRAMRRLDELMMELHRSSVAVGDTDLAKKF 1014

Query: 937  AAASESLRRGIMFSNSLY 954
               + +LR GI+F++SLY
Sbjct: 1015 EQGAAALRHGIVFADSLY 1032


>gi|224090560|ref|XP_002186759.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Taeniopygia
            guttata]
          Length = 1035

 Score = 1009 bits (2610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/951 (52%), Positives = 664/951 (69%), Gaps = 51/951 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P+    T  +            G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 103  CTHEVALPANEEFTGLKP---------RTGKAAKEYPFILDAFQREAILCVDNNQSVLVS 153

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 154  AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 213

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 214  RASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDTERGVVWEETIILLPDNVHYV 273

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHVVYTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 274  FLSATIPNARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 333

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 334  DNFNTAMQVL---RDAGDLAKGNQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 387

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 388  SKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 447

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+  K+DG   R+I S
Sbjct: 448  HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSASKFDGKDFRWISS 507

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 508  GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 567

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ+ + +P+I ++V+ LE +   +    E  V  Y++++  
Sbjct: 568  -RVE-EINPEYMLEKSFYQFQHCRTIPEIVERVNNLEAQYNKIVIPNEENVVIYYRIRQQ 625

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            +A+L K +   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK            
Sbjct: 626  LAKLGKDIEEYIHKPKYCLPFLQPGRLVKVKNEGDDYGWGVVVNFSKKSNVKPNSSELDP 685

Query: 627  -----------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                             SA     P+    RG   +VPV + L+S +S +RL +P DLRP
Sbjct: 686  LYVVEVLLHCSKDSLKNSATESAKPARPDERGEMQVVPVLVHLVSAISSVRLYIPKDLRP 745

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
            +D RQS+L +VQE++ RFP G+P L+P+ DM I+D  +  ++ +IE  EH++++HPL N 
Sbjct: 746  IDNRQSVLKSVQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKIEAFEHRMYSHPLHND 805

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
               E   +  ++KA++  +I+  K +++ ++  +  DELK R RVL++LG   +  V+++
Sbjct: 806  PNLETIYKLCEKKAQIAMDIKVAKRELKKARTVQQMDELKCRKRVLRRLGFATSSDVIEM 865

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL
Sbjct: 866  KGRVACEISSADELLLTEMMFNGFFNDLSAEQATALLSCFVFQEHSSEMPKLTEQLAGPL 925

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+QE A++IA++  E KLE++ + Y+ S  RP LMDV+Y W+ GA FA + +MTD+FEG
Sbjct: 926  RQMQECAKRIAKVSAEAKLEIDEENYLNS-FRPNLMDVVYTWANGANFAHICKMTDVFEG 984

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 985  SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1035


>gi|301623717|ref|XP_002941157.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Xenopus
            (Silurana) tropicalis]
          Length = 1031

 Score = 1009 bits (2609), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/953 (52%), Positives = 669/953 (70%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 99   CTHEVALPADEEYVPLKPRV-----------GKAAKEYPFVLDAFQREAILCIDNNQSVL 147

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEY+IA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 148  VSAHTSAGKTVCAEYSIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 207

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 208  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDAERGVVWEETIILLPDNVH 267

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 268  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPSGGDGLHLVVDENGDF 327

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 328  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 381

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ MSKLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 382  SFSKKDCEAYALQMSKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGI 441

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K+DG   R+I
Sbjct: 442  GIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKDFRWI 501

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG D+RGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 502  SSGEYIQMSGRAGRRGMDERGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVLN 561

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV KLEE+  S+    E  V  Y+K++
Sbjct: 562  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVAEKVKKLEEQYNSIQIPNEENVVTYYKIR 619

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK----KPSAG-- 629
              +A+L K++   I +P+  L ++  GRL+KV+    D+GWG VVN  K    KP++G  
Sbjct: 620  QQLAKLGKEIEDYIHKPKYCLPFMQPGRLVKVKSEDDDFGWGAVVNFSKKSNVKPNSGEL 679

Query: 630  -----VGTL-----------------PS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                 V  L                 P+    RG   +VPV L  +  +S +RL +P DL
Sbjct: 680  DPLYVVEVLINCSKESVKNAATEAAKPARPDERGEMQVVPVMLHTLCAISSVRLYIPKDL 739

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            R  D RQS+L ++QE++ RFP G+P L+P+ DM I+DP +  +V + E  EH++++HPLN
Sbjct: 740  RTTDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDPGLKKVVQKTEAFEHRMYSHPLN 799

Query: 724  KSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
               + E+  +  ++KA++  +I+  K +++ ++     DELK R RVL++LG   A  V+
Sbjct: 800  NDPNLESLYKLCEKKAQIAVDIRAAKRELKKARTVLQMDELKCRKRVLRRLGFATASDVI 859

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 860  EMKGRVACEISSADELLLTEMMFNGLFNDLTAEQATALLSCFVFQENSSEMPKLTEQLAG 919

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE+AR+IA++  E KLEV+ + Y+ S  R  LMDV+Y W+ GATFA++ +MTD+F
Sbjct: 920  PLRQMQETARRIAKVSAEAKLEVDEETYLGS-FRSNLMDVLYTWANGATFAQICKMTDVF 978

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 979  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1031


>gi|259013209|ref|NP_001158354.1| superkiller viralicidic activity 2-like 2 [Oryzias latipes]
 gi|242389872|dbj|BAH80441.1| superkiller viralicidic activity 2-like 2 [Oryzias latipes]
          Length = 1036

 Score = 1009 bits (2608), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/960 (51%), Positives = 670/960 (69%), Gaps = 49/960 (5%)

Query: 30   KQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYN--GEMAKTYSFELDPFQRVSVAC 87
            +Q +    C HEVA+P+ Y              P+    G+ AK Y F LDPFQR ++ C
Sbjct: 92   EQVDTVEGCSHEVALPADYEF-----------KPLKQRVGKAAKEYPFVLDPFQREAILC 140

Query: 88   LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVG 147
            ++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVG
Sbjct: 141  IDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVG 200

Query: 148  LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
            L+TGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D ERGVVWEE+I
Sbjct: 201  LITGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAERGVVWEETI 260

Query: 208  IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
            I LP  +  VFLSAT+ NA QFAEWICHLHKQPCHVVYTD+RPTPLQHY+FP GG GL+L
Sbjct: 261  ILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGLHL 320

Query: 268  VVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
            VVDE   FREDNF             G    GK   R  KGG+  G S +FKIVKMIMER
Sbjct: 321  VVDENGDFREDNFNTAMQVLRDVGDSGGSGGGKWDPRGRKGGT-KGPSSVFKIVKMIMER 379

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             FQPVI+FSFS++ECE +A+ ++KLDFNT +EK  VE+VF NAVDCL++ED+ LP +E +
Sbjct: 380  NFQPVIIFSFSKKECEAYALQVAKLDFNTDDEKRLVEEVFNNAVDCLSDEDKKLPQVEHV 439

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K+
Sbjct: 440  LPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKF 499

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG SHR+I SGEYIQMSGRAGRRG DDRGI I MVDE+M     K ++ G   PL S F 
Sbjct: 500  DGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFH 559

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L+Y  +LNL+ R E +   E++++ SF+QFQ+ +ALP + +K+ KLEE+  +++   E  
Sbjct: 560  LTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTIEIPNEES 617

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
            V  Y K++  +A+L K++   I +P+  L +L  GRL+KV++   D+GWGVVVN  KK +
Sbjct: 618  VVTYFKIRQQLAKLSKEIQEFIHKPKYCLPFLQPGRLVKVKKDDADFGWGVVVNFCKKTN 677

Query: 628  AGVGT------------------------------LPSRGGGY-IVPVQLPLISTLSKIR 656
                T                               P   G   +VPV L L++++S +R
Sbjct: 678  VKASTDSDPLYVVEVLLHCSKESMKNAATEAAKPAPPGETGEMQVVPVMLHLLTSISSVR 737

Query: 657  LSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
            L +P DLRP D RQ +L ++QE++ RFP G+P L+P+ DM I+DP +  ++ ++E  EH+
Sbjct: 738  LYIPKDLRPFDNRQLMLKSIQEVQKRFPDGVPLLDPIDDMGIKDPGLKKVIQKVEAFEHR 797

Query: 717  LFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGH 775
            ++ HPL+   + E+     ++KA +  E++  K +++ ++     DELK R RVL++LG 
Sbjct: 798  MYTHPLHSDPNLESVYSLCEKKALIATEVRTAKRELKKARTVLQMDELKCRKRVLRRLGF 857

Query: 776  IDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN 835
                 V+++KGR AC I +GDELL+TE+MFNG FNDL   Q  AL SCF+  + +SE   
Sbjct: 858  ASPSDVIEMKGRVACEISSGDELLLTEMMFNGLFNDLSVEQATALLSCFVFQENASEIPK 917

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
            L  +LA PL+Q+QE A++IA++  + KLEV+ + Y+ S  +  LMDV++ W+ G++F+++
Sbjct: 918  LTEQLAAPLRQMQECAKRIAKVSADAKLEVDEETYL-SQFKSHLMDVVFAWANGSSFSQI 976

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +MTD+FEGSIIR  RRL+E L Q+ +AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 977  CKMTDVFEGSIIRCMRRLEEVLRQMCSAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1036


>gi|21312352|ref|NP_082427.1| superkiller viralicidic activity 2-like 2 [Mus musculus]
 gi|71153763|sp|Q9CZU3.1|SK2L2_MOUSE RecName: Full=Superkiller viralicidic activity 2-like 2; AltName:
            Full=ATP-dependent helicase SKIV2L2
 gi|12848729|dbj|BAB28066.1| unnamed protein product [Mus musculus]
 gi|20809985|gb|AAH29230.1| Superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Mus
            musculus]
 gi|148686457|gb|EDL18404.1| superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Mus
            musculus]
          Length = 1040

 Score = 1007 bits (2604), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/1011 (50%), Positives = 678/1011 (67%), Gaps = 81/1011 (8%)

Query: 3    ESLMAGKRKAPEEDLHVTGTPEEESTKKQR-----------------------NLTRSCV 39
            ES   GK K    DL V GT E    KK R                            C 
Sbjct: 53   ESASGGKNK---RDLDVEGTDEPIFGKKPRIEDSINEDLSLADLMPRVKVQSVETVEGCT 109

Query: 40   HEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 110  HEVALPADEDYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVLVS 158

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 159  AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 218

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 219  TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 278

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 279  FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 339  DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 392

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 393  SKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 452

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I S
Sbjct: 453  HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISS 512

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 513  GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 572

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++  
Sbjct: 573  -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKIRQQ 630

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK            
Sbjct: 631  LAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDP 690

Query: 627  -----------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                             SA     P+    +G   +VPV + L+S +S +RL +P DLRP
Sbjct: 691  LYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLRP 750

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
            +D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N 
Sbjct: 751  VDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHND 810

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
               E      +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++
Sbjct: 811  PNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEM 870

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL
Sbjct: 871  KGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPL 930

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEG
Sbjct: 931  RQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEG 989

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|126315118|ref|XP_001365599.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Monodelphis domestica]
          Length = 1036

 Score = 1007 bits (2603), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/951 (52%), Positives = 667/951 (70%), Gaps = 51/951 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P+       +A          +G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 104  CTHEVALPADEEYVPLKA---------RDGKAAKEYPFILDAFQREAIQCVDNNQSVLVS 154

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 155  AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 214

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 215  TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 274

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 275  FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 334

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 335  DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 388

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 389  SKKDCEAYALQMTKLDFNTAEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 448

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I S
Sbjct: 449  HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISS 508

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG D+RGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 509  GEYIQMSGRAGRRGMDERGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVLNLL 568

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ+ +A+P + +KV KLE +  ++    E  V  Y+K++  
Sbjct: 569  -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKKLEAQYNAIAIPNEESVVIYYKIRQQ 626

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK            
Sbjct: 627  LAKLAKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDP 686

Query: 627  -----------------SAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDLRP 665
                             SA     P++ G      +VPV + L+S +S +RL +P DLRP
Sbjct: 687  LYVVEVLLHCSKESLKNSATEAAKPAKPGEKGEMQVVPVLVHLLSAISSVRLYIPRDLRP 746

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
            +D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N 
Sbjct: 747  IDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHND 806

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
            S  E   +  +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++
Sbjct: 807  SNLETVYKLCERKAQIAVDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEM 866

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + S+E   L  +LA PL
Sbjct: 867  KGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSTELPKLTEQLAGPL 926

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+QE A++IA++  E KLE++ + Y+ +T +  LMDV+Y W+ G TFA + +MTD+FEG
Sbjct: 927  RQMQECAKRIAKVSAEAKLEIDEETYL-NTFKSNLMDVVYTWATGCTFAHICKMTDVFEG 985

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 986  SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1036


>gi|395818820|ref|XP_003782813.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 3
            [Otolemur garnettii]
          Length = 1031

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 99   CTHEVALPADEDYVPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 147

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 148  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 207

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 208  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 267

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 268  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 327

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 328  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 381

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 382  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 441

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 442  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 501

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 502  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 561

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 562  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 619

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 620  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 679

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 680  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 739

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 740  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 799

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 800  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 859

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 860  EMKGRVACEISSADELLLTEMMFNGLFNDLTAEQATALLSCFVFQENSSEMPKLTEQLAG 919

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 920  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 978

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 979  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1031


>gi|26353436|dbj|BAC40348.1| unnamed protein product [Mus musculus]
          Length = 993

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 513/1011 (50%), Positives = 678/1011 (67%), Gaps = 81/1011 (8%)

Query: 3   ESLMAGKRKAPEEDLHVTGTPEEESTKKQR-----------------------NLTRSCV 39
           ES   GK K    DL V GT E    KK R                            C 
Sbjct: 6   ESASGGKNK---RDLDVEGTDEPIFGKKPRIEDSINEDLSLADLMPRVKVQSVETVEGCT 62

Query: 40  HEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 63  HEVALPADEDYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVLVS 111

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 112 AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 171

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
            ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 172 TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 231

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 232 FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 291

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
           DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 292 DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 345

Query: 338 SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
           S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 346 SKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 405

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I S
Sbjct: 406 HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISS 465

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           GEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 466 GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 525

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
            R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++  
Sbjct: 526 -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKIRQQ 583

Query: 578 IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
           +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK            
Sbjct: 584 LAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDP 643

Query: 627 -----------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                            SA     P+    +G   +VPV + L+S +S +RL +P DLRP
Sbjct: 644 LYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLRP 703

Query: 666 LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
           +D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N 
Sbjct: 704 VDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHND 763

Query: 725 SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
              E      +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++
Sbjct: 764 PNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEM 823

Query: 785 KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
           KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL
Sbjct: 824 KGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPL 883

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
           +Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEG
Sbjct: 884 RQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEG 942

Query: 905 SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 943 SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 993


>gi|417515647|gb|JAA53640.1| superkiller viralicidic activity 2-like 2 [Sus scrofa]
          Length = 1042

 Score = 1006 bits (2601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|149643077|ref|NP_001092482.1| superkiller viralicidic activity 2-like 2 [Bos taurus]
 gi|148744957|gb|AAI42300.1| SKIV2L2 protein [Bos taurus]
          Length = 1040

 Score = 1006 bits (2601), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/953 (52%), Positives = 665/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 108  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 156

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 157  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G  +GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 337  REDNFNTAMQVL---RDAGDLAKGDQNGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 390

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 391  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGI 450

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 451  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 510

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 511  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 570

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 571  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 628

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 629  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 688

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 689  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 749  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 809  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 869  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 928

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 929  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 987

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 988  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|395818816|ref|XP_003782811.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1
            [Otolemur garnettii]
          Length = 1042

 Score = 1006 bits (2600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYVPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLTAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|350594292|ref|XP_003134012.3| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Sus
            scrofa]
          Length = 1042

 Score = 1006 bits (2600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|148878031|gb|AAI46078.1| SKIV2L2 protein [Bos taurus]
          Length = 1040

 Score = 1006 bits (2600), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 108  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 156

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 157  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 337  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 390

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 391  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGI 450

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 451  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 510

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 511  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 570

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 571  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 628

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 629  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 688

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 689  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 749  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 809  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 869  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 928

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 929  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 987

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 988  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|426246501|ref|XP_004017032.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Ovis aries]
          Length = 1042

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKSDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|440912988|gb|ELR62502.1| Superkiller viralicidic activity 2-like 2, partial [Bos grunniens
            mutus]
          Length = 1041

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 109  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 157

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 158  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 217

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 218  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 277

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 278  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 337

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 338  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 391

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 392  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGI 451

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 452  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 511

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 512  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 571

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 572  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 629

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 630  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 689

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 690  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVYLLSAISSVRLYIPKDL 749

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 750  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 809

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 810  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 869

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 870  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 929

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 930  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 988

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 989  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1041


>gi|77539760|ref|NP_001029265.1| superkiller viralicidic activity 2-like 2 [Rattus norvegicus]
 gi|149059353|gb|EDM10360.1| similar to RIKEN cDNA 2610528A15 [Rattus norvegicus]
          Length = 1042

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|291395365|ref|XP_002714082.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Oryctolagus
            cuniculus]
          Length = 1040

 Score = 1005 bits (2599), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/1011 (50%), Positives = 682/1011 (67%), Gaps = 81/1011 (8%)

Query: 3    ESLMAGKRKAPEEDLHVTGTPE---------EESTKKQRNLT--------------RSCV 39
            ES  +GK K    D  + GT E         EES  +  +LT                C 
Sbjct: 53   ESTNSGKNK---RDTDIEGTDEPIFGKKPRLEESITEDLSLTDLMPRVKVQSVETVEGCT 109

Query: 40   HEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 110  HEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVLVS 158

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 159  AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 218

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 219  TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 278

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 279  FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 339  DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 392

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 393  SKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 452

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I S
Sbjct: 453  HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISS 512

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 513  GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVLNLL 572

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++  
Sbjct: 573  -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQ 630

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK            
Sbjct: 631  LAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDP 690

Query: 627  -----------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                             SA     P+    +G   +VPV + L+S +S +RL +P DLRP
Sbjct: 691  LYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRP 750

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NK 724
            +D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N 
Sbjct: 751  MDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHND 810

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
               E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++
Sbjct: 811  PNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEM 870

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL
Sbjct: 871  KGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPL 930

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEG
Sbjct: 931  RQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEG 989

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  SIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|395510300|ref|XP_003759416.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Sarcophilus
            harrisii]
          Length = 1013

 Score = 1005 bits (2598), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 667/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K             +G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 81   CTHEVALPADEEYVPLKPR-----------DGKAAKEYPFILDAFQREAIQCVDNNQSVL 129

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 130  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 189

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 190  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 249

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 250  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 309

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 310  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 363

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 364  SFSKKDCEAYALQMTKLDFNTAEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGI 423

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 424  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 483

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG D+RGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 484  SSGEYIQMSGRAGRRGMDERGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVLN 543

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV KLE +  ++    E  V  Y+K++
Sbjct: 544  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKKLEAQYNAIAIPNEESVVIYYKIR 601

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 602  QQLAKLAKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 661

Query: 627  -------------------SAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P++ G      +VPV + L+S +S +RL +P DL
Sbjct: 662  DPLYVVEVLLHCSKESLKNSATEAAKPAKPGEKGEMQVVPVLVHLLSAISSVRLYIPRDL 721

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 722  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 781

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N S  E   +  +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 782  NDSNLETVYKLCERKAQIAVDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 841

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + S+E   L  +LA 
Sbjct: 842  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSTELPKLTEQLAG 901

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ +T +  LMDV+Y W+ G TFA + +MTD+F
Sbjct: 902  PLRQMQECAKRIAKVSAEAKLEIDEETYL-NTFKSNLMDVVYTWATGCTFAHICKMTDVF 960

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 961  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1013


>gi|114600242|ref|XP_001145794.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2 [Pan
            troglodytes]
 gi|397514271|ref|XP_003827415.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Pan
            paniscus]
 gi|410226106|gb|JAA10272.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410226108|gb|JAA10273.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410226110|gb|JAA10274.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410258606|gb|JAA17270.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410258608|gb|JAA17271.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410258610|gb|JAA17272.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410352681|gb|JAA42944.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410352683|gb|JAA42945.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
 gi|410352685|gb|JAA42946.1| superkiller viralicidic activity 2-like 2 [Pan troglodytes]
          Length = 1042

 Score = 1005 bits (2598), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|355749922|gb|EHH54260.1| Superkiller viralicidic activity 2-like 2 [Macaca fascicularis]
 gi|380788393|gb|AFE66072.1| superkiller viralicidic activity 2-like 2 [Macaca mulatta]
 gi|380788395|gb|AFE66073.1| superkiller viralicidic activity 2-like 2 [Macaca mulatta]
 gi|380788405|gb|AFE66078.1| superkiller viralicidic activity 2-like 2 [Macaca mulatta]
 gi|383409597|gb|AFH28012.1| superkiller viralicidic activity 2-like 2 [Macaca mulatta]
 gi|384940404|gb|AFI33807.1| superkiller viralicidic activity 2-like 2 [Macaca mulatta]
 gi|384946132|gb|AFI36671.1| superkiller viralicidic activity 2-like 2 [Macaca mulatta]
          Length = 1042

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|354482595|ref|XP_003503483.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Cricetulus
            griseus]
          Length = 1041

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 109  CTHEVALPADEEYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 157

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 158  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 217

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 218  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 277

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 278  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 337

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 338  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 391

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 392  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 451

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 452  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 511

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 512  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 571

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 572  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKIR 629

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 630  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 689

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 690  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDL 749

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 750  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 809

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 810  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 869

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 870  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 929

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 930  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 988

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 989  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1041


>gi|296194581|ref|XP_002745007.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Callithrix
            jacchus]
          Length = 1042

 Score = 1004 bits (2597), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|40850929|gb|AAH65258.1| SKIV2L2 protein, partial [Homo sapiens]
          Length = 1043

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 111  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 159

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 160  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 219

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 220  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 279

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 280  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 339

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 340  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 393

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 394  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 453

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 454  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 513

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 514  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 573

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 574  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 631

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 632  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 691

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 692  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 751

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 752  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 811

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 812  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 871

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 872  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 931

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 932  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 990

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 991  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1043


>gi|47550803|ref|NP_999933.1| superkiller viralicidic activity 2-like 2 [Danio rerio]
 gi|38494342|gb|AAH61456.1| Superkiller viralicidic activity 2-like 2 [Danio rerio]
          Length = 1034

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/960 (51%), Positives = 665/960 (69%), Gaps = 49/960 (5%)

Query: 30   KQRNLTRSCVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVAC 87
            +Q      C HEV +P+   Y   K              G+ AK Y F LDPFQR ++ C
Sbjct: 90   EQVETVEGCTHEVVLPANEEYTPLKPRV-----------GKAAKEYPFILDPFQREAILC 138

Query: 88   LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVG 147
            ++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVG
Sbjct: 139  IDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVG 198

Query: 148  LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
            LMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+I
Sbjct: 199  LMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETI 258

Query: 208  IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
            I LP  +  VFLSAT+ NA QFAEWICHLHKQPCHVVYTD+RPTPLQHY+FP GG GL+L
Sbjct: 259  ILLPDNVHHVFLSATVPNARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGLHL 318

Query: 268  VVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
            VVDE  +FREDNF             G     K   +  KGG+  G S++FKIVKMIMER
Sbjct: 319  VVDENGEFREDNFNTAMQVLRDAGDTGGNTGAKWDPKGRKGGT-KGPSNVFKIVKMIMER 377

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             FQPVI+FSFS++ECE +A+ +SKLDFNT EEK  VE+VF NA DCL++ED+ LP +E +
Sbjct: 378  NFQPVIIFSFSKKECEAYALQVSKLDFNTDEEKKLVEEVFNNATDCLSDEDKKLPQVEHV 437

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K+
Sbjct: 438  LPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKF 497

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG   R+I SGEYIQMSGRAGRRG D+RGI I MVDE+M     K ++ G   PL S F 
Sbjct: 498  DGKDFRWISSGEYIQMSGRAGRRGMDERGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFH 557

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +  ++ KLEEE  ++    E  
Sbjct: 558  LTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAVPGVVDRMKKLEEEYNAIRIPKEES 615

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
            V  Y+K++  +A+L K++   I +P   L +L  GRL+KV++   D+GWGVVVN  KK +
Sbjct: 616  VVTYYKIRQQLAKLGKEIEEFIHKPRYCLPFLQPGRLVKVKKEDLDFGWGVVVNFQKKSN 675

Query: 628  AGVG------------------------TLPSRGGG-------YIVPVQLPLISTLSKIR 656
               G                        T  +R  G        +VPV L LI+++S +R
Sbjct: 676  VKAGGDLDPLFVVEVLVHCSKDSVKNAATESARPAGPAEKGEMQVVPVILHLITSISSVR 735

Query: 657  LSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
            L +P DLRP D RQS+L ++QE++ RFP G+P L+P+ DM I+DP +  ++ ++E  EH+
Sbjct: 736  LYIPKDLRPYDNRQSMLKSIQEVQKRFPDGIPLLDPIDDMGIKDPALKKVIQKVEAFEHR 795

Query: 717  LFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGH 775
            ++ HPL+   + E   +  ++KA +  +I+  K +++ ++     DELK R RVL++LG 
Sbjct: 796  MYTHPLHSDPNLEAVYKLCEKKALIAGDIKAAKRELKKARTVLQMDELKCRKRVLRRLGF 855

Query: 776  IDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN 835
              +  V+++KGR AC   +GDELL+TE+MFNG FNDL   Q  AL SCF+  + ++E   
Sbjct: 856  ATSSDVIEMKGRVACETSSGDELLLTEMMFNGLFNDLTAEQATALLSCFVFQENANEMPK 915

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
            L  +L  PL+Q+QE A++IA++  E KLEV+ D Y+ +  RP LMDV+Y W+ G++F+++
Sbjct: 916  LTEQLGGPLRQMQECAKRIAKVSAEAKLEVDEDSYL-NQFRPHLMDVVYTWANGSSFSQI 974

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 975  CKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFATGITKIKRDIVFAASLYL 1034


>gi|34364907|emb|CAE45877.1| hypothetical protein [Homo sapiens]
          Length = 1042

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 663/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P++  G     +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDGKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L   LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTERLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|193211480|ref|NP_056175.3| superkiller viralicidic activity 2-like 2 [Homo sapiens]
 gi|71153172|sp|P42285.3|SK2L2_HUMAN RecName: Full=Superkiller viralicidic activity 2-like 2; AltName:
            Full=ATP-dependent helicase SKIV2L2
 gi|85397868|gb|AAI04997.1| Superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Homo
            sapiens]
 gi|109731061|gb|AAI13510.1| Superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Homo
            sapiens]
 gi|119575314|gb|EAW54919.1| superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Homo
            sapiens]
 gi|261858608|dbj|BAI45826.1| superkiller viralicidic activity 2-like 2 [synthetic construct]
          Length = 1042

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|6633995|dbj|BAA06124.2| KIAA0052 protein [Homo sapiens]
          Length = 1046

 Score = 1004 bits (2596), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 114  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 162

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 163  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 222

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 223  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 282

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 283  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 342

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 343  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 396

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 397  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 456

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 457  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 516

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 517  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 576

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 577  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 634

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 635  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 694

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 695  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 754

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 755  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 814

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 815  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 874

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 875  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 934

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 935  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 993

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 994  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1046


>gi|301785411|ref|XP_002928119.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Ailuropoda
            melanoleuca]
          Length = 1042

 Score = 1004 bits (2595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|403267572|ref|XP_003925897.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1
            [Saimiri boliviensis boliviensis]
          Length = 1042

 Score = 1004 bits (2595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 663/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIHDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|61363854|gb|AAX42455.1| KIAA0052 protein [synthetic construct]
 gi|114325466|gb|AAH28604.3| Superkiller viralicidic activity 2-like 2 (S. cerevisiae) [Homo
            sapiens]
          Length = 1042

 Score = 1004 bits (2595), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FND+   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDISAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|402871558|ref|XP_003899726.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Papio
            anubis]
          Length = 1042

 Score = 1003 bits (2594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 663/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P +  KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVDKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|348569044|ref|XP_003470308.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cavia
            porcellus]
          Length = 1042

 Score = 1003 bits (2594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRI-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   E++   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEQQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|351714361|gb|EHB17280.1| Superkiller viralicidic activity 2-like 2 [Heterocephalus glaber]
          Length = 1040

 Score = 1003 bits (2594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 108  CTHEVALPADEDYLPLKPRI-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 156

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 157  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 337  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 390

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 391  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 450

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 451  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 510

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 511  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 570

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   E++   +    E  V  Y+K++
Sbjct: 571  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEQQYNKIVIPNEESVVIYYKIR 628

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 629  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 688

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 689  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 749  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 809  NDPNLETVYTLCEKKAQIAIDIKSAKRELKRARTVLQMDELKCRKRVLRRLGFATSSDVI 868

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 869  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 928

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 929  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 987

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 988  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|432105562|gb|ELK31759.1| Superkiller viralicidic activity 2-like 2 [Myotis davidii]
          Length = 1040

 Score = 1003 bits (2594), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 108  CTHEVALPADEDYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 156

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 157  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 337  REDNFNTAMQVL---REAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 390

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 391  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 450

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 451  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 510

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 511  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 570

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 571  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVRNSEEQYNKIVIPNEESVVIYYKIR 628

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 629  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 688

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 689  DPLYVVEVLLRCSRESLKNSATEAAKPAKPEEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 749  RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 809  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 869  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 928

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV++ W+ GATFA + +MTD+F
Sbjct: 929  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVHTWATGATFAHICKMTDVF 987

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 988  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|60654395|gb|AAX29888.1| KIAA0052 protein [synthetic construct]
          Length = 1043

 Score = 1003 bits (2593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 664/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FND+   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDISAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|73949523|ref|XP_849676.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Canis
            lupus familiaris]
          Length = 1042

 Score = 1003 bits (2593), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 663/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   + +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYVHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S  +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYLNS-FKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|297294287|ref|XP_002808474.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
            2-like 2-like [Macaca mulatta]
          Length = 1042

 Score = 1002 bits (2591), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 663/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---REAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLK GI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKXGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|350594294|ref|XP_003483871.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2 [Sus
           scrofa]
          Length = 941

 Score = 1002 bits (2590), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/922 (53%), Positives = 654/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
            +KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+K
Sbjct: 501 VEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRPLD RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPLDNRQSVLKSIQEVQKRFPDGVPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-S 859

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
           + +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 860 SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|410948589|ref|XP_003981013.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
            2-like 2 [Felis catus]
          Length = 1042

 Score = 1001 bits (2589), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 663/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            RED F          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDXFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|332821355|ref|XP_001145481.2| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Pan
           troglodytes]
 gi|397514273|ref|XP_003827416.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2 [Pan
           paniscus]
          Length = 941

 Score = 1001 bits (2587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/922 (53%), Positives = 654/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
            +KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+K
Sbjct: 501 VEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-S 859

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
           + +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 860 SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|402871560|ref|XP_003899727.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2
           [Papio anubis]
          Length = 941

 Score = 1001 bits (2587), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/922 (53%), Positives = 653/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
             KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+K
Sbjct: 501 VDKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-S 859

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
           + +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 860 SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|410903506|ref|XP_003965234.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Takifugu
            rubripes]
          Length = 1034

 Score = 1000 bits (2586), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 498/953 (52%), Positives = 666/953 (69%), Gaps = 50/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P    Y   K              G+ AK Y F LDPFQR ++ C++ NESVL
Sbjct: 97   CTHEVALPVNDQYKPLKPRV-----------GKAAKEYPFILDPFQREAILCIDNNESVL 145

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 146  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 205

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 206  NPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAERGVVWEETIILLPDNVH 265

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHVVYTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 266  YVFLSATIPNARQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 325

Query: 276  REDNF-VKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            REDNF   +Q        GG    GK   R  KGG+  G S +FKIVKMIMER FQPVI+
Sbjct: 326  REDNFNTAMQVLRDAGDSGGASGGGKWDPRGRKGGT-KGPSSVFKIVKMIMERNFQPVII 384

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS++ECE +A+ ++KLDFN  +EK  VE+VF NAVDCL++ED+ LP +E +LPLLKRG
Sbjct: 385  FSFSKKECEAYALQVAKLDFNKDDEKRLVEEVFNNAVDCLSDEDKKLPQVEHVLPLLKRG 444

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K+DG SHR+
Sbjct: 445  IGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKSHRF 504

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            I SGEYIQMSGRAGRRG DDRGI I MVDE+M     K ++ G   PL S F L+Y  +L
Sbjct: 505  ITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAFHLTYNMVL 564

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NL+ R E +   E++++ SF+QFQ+ +ALP + +K+ K EE+  +++   +  V  Y K+
Sbjct: 565  NLL-RVE-EINPEYMLEKSFYQFQHYRALPGVVEKIKKYEEQYHTIEIPNQESVVTYFKI 622

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP-------- 626
            +  +A+L K++   I RP+  L +L  GRL+KV+    D+GWGVVVN  KK         
Sbjct: 623  RQQLAKLGKEIQEFIHRPKYCLPFLQPGRLVKVKNEDADFGWGVVVNFNKKTNVKSSTDA 682

Query: 627  -------------------SAGVGTLPSRGGGY----IVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+  G      +VPV + L+S LS +RL +P DL
Sbjct: 683  EPLYVVEVLLHCSKESVKDSATEAAKPAAPGEVGEMQVVPVMVQLLSALSSVRLYIPKDL 742

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            +PLD RQ +L ++QE++ RFP G+P L+PV DM I+D  +  ++ ++E  EH++++HPL+
Sbjct: 743  KPLDNRQLMLKSIQEVQKRFPDGIPLLDPVDDMGIKDQALKKIIQKVEAFEHRMYSHPLH 802

Query: 724  KSQDENQIRCF-QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
               +   +    ++KA +  +I+  K +++ +Q     D+LK R RVL++LG      V+
Sbjct: 803  SDPNLESVYALCEKKALIGADIRASKRELKKAQTVLQMDQLKCRKRVLRRLGFASPSDVI 862

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I +GDELL+TE++FNG FNDL   Q  AL SCF+  + +SE   L  +LA 
Sbjct: 863  EMKGRVACEISSGDELLLTEMIFNGLFNDLTVEQATALLSCFVFQENASEMPKLTEQLAA 922

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  + KL+V+ + Y+ +  +P LMDV+Y W+ G+TFA++ +MTD+F
Sbjct: 923  PLRQMQECAKRIAKVSADAKLDVDEETYL-NQFKPHLMDVVYAWANGSTFAQICKMTDVF 981

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+ +AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 982  EGSIIRCMRRLEEVLRQMCSAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1034


>gi|395818818|ref|XP_003782812.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2
           [Otolemur garnettii]
          Length = 941

 Score = 1000 bits (2586), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/922 (53%), Positives = 654/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
            +KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+K
Sbjct: 501 VEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLT 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-S 859

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
           + +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 860 SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|403267574|ref|XP_003925898.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 941

 Score = 1000 bits (2585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/922 (53%), Positives = 653/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
            +KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+K
Sbjct: 501 VEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIHDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-S 859

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
           + +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 860 SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|348528039|ref|XP_003451526.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Oreochromis niloticus]
          Length = 1037

 Score = 1000 bits (2585), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/961 (51%), Positives = 668/961 (69%), Gaps = 50/961 (5%)

Query: 30   KQRNLTRSCVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVAC 87
            +Q      C HEVA+P+   Y   K              G+ AK Y F LDPFQR ++ C
Sbjct: 92   EQVETVEGCSHEVALPASEEYKPLKPRV-----------GKAAKEYPFVLDPFQREAILC 140

Query: 88   LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVG 147
            ++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVG
Sbjct: 141  IDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVG 200

Query: 148  LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
            LMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D ERGVVWEE+I
Sbjct: 201  LMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDTERGVVWEETI 260

Query: 208  IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
            I LP  +  VFLSAT+ NA QFAEWICHLHKQPCHVVYTD+RPTPLQHY+FP GG GL+L
Sbjct: 261  ILLPDNVHYVFLSATIPNAKQFAEWICHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGLHL 320

Query: 268  VVDEKEQFREDNF-VKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIME 326
            VVDE  +FREDNF   +Q        GG     K   +  +GG+  G S +FKIVKMIME
Sbjct: 321  VVDENGEFREDNFNTAMQVLRDAGDSGGSSGGAKWDPKGRRGGT-KGPSSVFKIVKMIME 379

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            R FQPVI+FSFS++ECE +A+ ++KLDFN  +EK  VE+VF NAVDCL++ED+ LP +E 
Sbjct: 380  RNFQPVIIFSFSKKECEAYALQVAKLDFNRDDEKRLVEEVFNNAVDCLSDEDKKLPQVEH 439

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K
Sbjct: 440  VLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMPARTVLFTSARK 499

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG +HR+I SGEYIQMSGRAGRRG DDRGI I MVDE+M     K ++ G   PL S F
Sbjct: 500  FDGKNHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVDEKMSPAVGKQLLKGSADPLNSAF 559

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L+Y  +LNL+ R E +   E++++ SF+QFQ+ +ALP + +K+ KLEE+  +++   E 
Sbjct: 560  HLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRALPGVVEKIKKLEEQYHTIEIPNEE 617

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP 626
             V  Y K++  +A+L K++   I +P+  L +L  GRL+KV+    D+GWGVVVN  KK 
Sbjct: 618  SVVTYFKIRQQLAKLGKEIQEFIHKPKYCLPFLQPGRLVKVKNEDADFGWGVVVNFCKKS 677

Query: 627  SAGVGT------------------------------LPSRGGGY-IVPVQLPLISTLSKI 655
            +    T                               P   G   +VPV L L++++S +
Sbjct: 678  NVKTTTDSEPLYVVEVLVHCSKDSVKDAATEAAKPAAPGETGEMQVVPVMLHLLTSVSSV 737

Query: 656  RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
            RL +P DLRP D RQ +L ++QE++ RFP G+P L+P+ DM I+DP +  ++ +IE  EH
Sbjct: 738  RLYIPKDLRPYDNRQLMLKSIQEVQKRFPDGVPVLDPIDDMGIKDPALKKVIQKIEAFEH 797

Query: 716  KLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
            +++ HPL+   + E+     ++KA +  +++  K  ++ ++     D+LK R RVL++LG
Sbjct: 798  RMYTHPLHSDPNLESVYSLCEKKALIAADVRTAKRDLKKARTILQMDQLKCRKRVLRRLG 857

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
                  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + +SE  
Sbjct: 858  FASPSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLTVEQATALLSCFVFQENASEMP 917

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             L  +LA PL+Q+QE A++IA++  + KLEV+ + Y+ +  +P LMDV+Y W+ GATFA+
Sbjct: 918  KLTEQLAAPLRQMQECAKRIAKVSADAKLEVDEESYL-NQFKPHLMDVVYAWANGATFAQ 976

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + +MTD+FEGSIIR  RRL+E L Q+ +A++A+G   LE KFA     ++R I+F+ SLY
Sbjct: 977  ICKMTDVFEGSIIRCMRRLEEVLRQMCSASKAIGNTELENKFAEGITKIKRDIVFAASLY 1036

Query: 955  L 955
            L
Sbjct: 1037 L 1037


>gi|194388308|dbj|BAG65538.1| unnamed protein product [Homo sapiens]
          Length = 941

 Score =  999 bits (2584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/922 (53%), Positives = 653/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS++ CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKGCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
            +KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+K
Sbjct: 501 VEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-S 859

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
           + +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 860 SFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|291244315|ref|XP_002742043.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Saccoglossus kowalevskii]
          Length = 1030

 Score =  999 bits (2584), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/954 (51%), Positives = 666/954 (69%), Gaps = 53/954 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNESV 94
            +C HEVAVP           H     P+     + AK Y F LDPFQ+ ++ CLE N+SV
Sbjct: 95   ACTHEVAVP-----------HDAEYEPLKPTGKKAAKEYPFILDPFQKEALKCLENNQSV 143

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIAM+ RDKQRVIYT+P+KALSNQKYREL++EF+DVGLMTGDVT
Sbjct: 144  LVSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTPIKALSNQKYRELYEEFQDVGLMTGDVT 203

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+II LP  +
Sbjct: 204  INPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEETIILLPDNV 263

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA QFAEWICHLHKQPCHVVYTD+RP PLQHY+FP GG GL+LVVDE  +
Sbjct: 264  HYVFLSATIPNAKQFAEWICHLHKQPCHVVYTDYRPVPLQHYIFPSGGDGLHLVVDENGE 323

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            FR+DNF          + GG    G  + R  KGG+  G S+ FKIVKMIMER F PVIV
Sbjct: 324  FRDDNFNAAMAIL---RDGGDAAKGDQALRGRKGGT-RGPSNCFKIVKMIMERNFSPVIV 379

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS++ECE +AM MSK++FNT  EK+ VE+VF NA+DCL++ED+ LP +E +LPLLKRG
Sbjct: 380  FSFSKKECEAYAMQMSKIEFNTSAEKNLVEEVFSNAIDCLSDEDKKLPQVESVLPLLKRG 439

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HHSGLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG   R+
Sbjct: 440  IGIHHSGLLPILKETIEILFSEGLIKALFATETFAMGLNMPARTVLFTNARKFDGKDFRW 499

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            I SGEYIQMSGRAGRRG DDRGI I+M+DE+M     K+++ GK   L S F L+Y  +L
Sbjct: 500  ITSGEYIQMSGRAGRRGLDDRGIVIMMIDEKMSAGVGKNLLQGKADALNSAFHLTYNMVL 559

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NL+ R E +   E++++ SF+QFQ   A+P++  K+ KLE++   +    E  V  Y+K+
Sbjct: 560  NLL-RVE-EINPEYMLERSFYQFQNYAAIPEMIDKLKKLEKDYNGVVIPNEDSVESYYKI 617

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
            +  + +L K++   I  P+  L YL  GRL++VR    D+ WGVVVN  KK +    + P
Sbjct: 618  RQQLDKLGKEVQRFINLPKYCLPYLQPGRLVRVRNDDEDFSWGVVVNFQKKANQSNKSNP 677

Query: 635  S--------------------------------RGGGYIVPVQLPLISTLSKIRLSVPPD 662
                                             +G   +VPV L L+  +S IRL +P D
Sbjct: 678  KEPVYVAEVLLECSKDSIKNSASESAKPPKPNEKGEMVVVPVMLHLLIQISSIRLYIPKD 737

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            LRP D RQS+L +++E+  RFP G+P L+P+ DM I++  +  ++ +IE  EH++++H L
Sbjct: 738  LRPYDNRQSVLKSIKEVRKRFPDGVPLLDPIDDMGIKESGLKKVIEKIEAFEHRMYSHSL 797

Query: 723  -NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
             N  Q E     +++KA++  E++ +K ++R ++     DELK R RVL++LG+     V
Sbjct: 798  HNDPQLEKLYDMYEKKAQLASEVKAVKQELRKAKTVLQMDELKCRKRVLRRLGYATVSDV 857

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            +++KGR AC I +GDELL+TE++FNG FN+L   Q+ AL S F+  +K++E   L  EL+
Sbjct: 858  IEMKGRVACEISSGDELLLTEMIFNGVFNELKCEQIIALLSVFVFQEKANEMPKLTEELS 917

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             PL+Q+QESAR+IA++ +E KLEV+ ++Y+ES   P LMDV Y W+ GA+F ++ QMTD+
Sbjct: 918  GPLRQMQESARRIAKVSSEAKLEVDEEDYIESFC-PHLMDVCYAWANGASFLQICQMTDV 976

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +EGSIIR  RRL+E L ++  AA+A+G  +LE KFA     ++R I+F+ SLYL
Sbjct: 977  YEGSIIRCMRRLEELLREMCQAAKAIGNTDLENKFAEGITKIKRDIVFAASLYL 1030


>gi|158256730|dbj|BAF84338.1| unnamed protein product [Homo sapiens]
          Length = 1042

 Score =  999 bits (2582), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 662/953 (69%), Gaps = 55/953 (5%)

Query: 38   CVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++  ++ N+SVL
Sbjct: 110  CTHEVALPAEEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQYVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K+    I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEFEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1042


>gi|345794053|ref|XP_859420.2| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 4
           [Canis lupus familiaris]
          Length = 941

 Score =  998 bits (2581), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/922 (53%), Positives = 653/922 (70%), Gaps = 42/922 (4%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+ AK Y F LD FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TS
Sbjct: 29  GKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTS 88

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 89  PIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YT
Sbjct: 149 IFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYT 208

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           D+RPTPLQHY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  
Sbjct: 209 DYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR-- 263

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           KGG+  G S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+V
Sbjct: 264 KGGT-KGPSNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEV 322

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F NA+DCL++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATE
Sbjct: 323 FSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATE 382

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M
Sbjct: 383 TFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKM 442

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
                K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P +
Sbjct: 443 SPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGV 500

Query: 547 GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
            +KV   EE+   +    E  V  Y+K++  +A+L K++   + +P+  L +L  GRL+K
Sbjct: 501 VEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYVHKPKYCLPFLQPGRLVK 560

Query: 607 VREGGTDWGWGVVVNVVKKP----------------------------SAGVGTLPS--- 635
           V+  G D+GWGVVVN  KK                             SA     P+   
Sbjct: 561 VKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPD 620

Query: 636 -RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ 
Sbjct: 621 EKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGVPLLDPID 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ 
Sbjct: 681 DMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKK 740

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL 
Sbjct: 741 ARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLS 800

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S
Sbjct: 801 AEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYLNS 860

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
             +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE
Sbjct: 861 -FKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELE 919

Query: 934 KKFAAASESLRRGIMFSNSLYL 955
            KFA     ++R I+F+ SLYL
Sbjct: 920 NKFAEGITKIKRDIVFAASLYL 941


>gi|156392405|ref|XP_001636039.1| predicted protein [Nematostella vectensis]
 gi|156223138|gb|EDO43976.1| predicted protein [Nematostella vectensis]
          Length = 1031

 Score =  998 bits (2581), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 501/1002 (50%), Positives = 691/1002 (68%), Gaps = 74/1002 (7%)

Query: 9    KRKAPEEDLHVTGTPEEES--TKKQR--------------------NLTRSCVHEVAVPS 46
            KR    E+   T  P++ES  TKKQR                    ++  +C HEVA P 
Sbjct: 49   KRDFDTEENEPTWDPDDESAATKKQRVEDTIESLLESVPQVDVVTLDILEACTHEVAFPK 108

Query: 47   GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTA 106
            G+  T    +  + A P      AK Y F LDPFQ+ ++ CLE N+SVL+SAHTSAGKT 
Sbjct: 109  GFEYT---PLVQSAAKP------AKEYPFILDPFQKEALRCLENNKSVLISAHTSAGKTV 159

Query: 107  VAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTT 166
            VAEYAIAM+ + KQRVIYT+P+KALSNQKYREL++EF+DVGLMTGDVT++P AS LVMTT
Sbjct: 160  VAEYAIAMSLQKKQRVIYTTPIKALSNQKYRELYEEFQDVGLMTGDVTINPTASALVMTT 219

Query: 167  EILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNA 226
            EILR MLYRGSEV++EVAWV+FDEIHYM+D+ERGVVWEE+II LP  +  VFLSAT+ NA
Sbjct: 220  EILRSMLYRGSEVMREVAWVVFDEIHYMRDKERGVVWEETIILLPDNVHYVFLSATIPNA 279

Query: 227  TQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT 286
             QFAEWI HLHKQPCHVVYTDFRPTPLQHY++P GG GL+LVVDEK  FRE+NF K    
Sbjct: 280  RQFAEWIVHLHKQPCHVVYTDFRPTPLQHYIYPAGGDGLFLVVDEKGDFREENFQKAMGV 339

Query: 287  FLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHA 346
                ++GG    G    +  + G   G S+ FKIVKMIMER FQPVI+FSFS++ECE +A
Sbjct: 340  I---RVGG----GDPGAQRGRKGGTKGPSNTFKIVKMIMERNFQPVIIFSFSKKECEAYA 392

Query: 347  MSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVI 406
            + MSKLDFNT +EK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +HHSGLLP++
Sbjct: 393  LQMSKLDFNTAQEKTLVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGIHHSGLLPIL 452

Query: 407  KELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGR 466
            KE +E+LF EGL+KALFATETFA+GLNMPA+TVVF+  +K+DG   R+I SGEYIQMSGR
Sbjct: 453  KETIEILFSEGLIKALFATETFALGLNMPARTVVFSNARKFDGKDFRFITSGEYIQMSGR 512

Query: 467  AGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTA 526
            AGRRG D+RGI I+++DE+M  +  K ++ G   PL S F L+Y  +LNL+ R E +   
Sbjct: 513  AGRRGLDERGIVILIIDEKMGPDVGKGLLKGHADPLNSAFHLTYNMVLNLL-RVE-EINP 570

Query: 527  EHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLM 586
            E +++ SF+QFQ   A+P + +K+  LE +   ++   E  +  Y+K++  + +L   ++
Sbjct: 571  EIMLEKSFYQFQNYAAIPAMIEKMKDLESKRDQVEIPNEESITAYYKIRQQLKKLADDML 630

Query: 587  SEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS------------------- 627
            + I +P+  L ++  GRL++V+    D+GWG V+N  KK +                   
Sbjct: 631  AFIHQPKYCLPFMQPGRLVRVQNNDEDFGWGAVLNFQKKANQKASGAVGDTLYVLEVLLK 690

Query: 628  -------AGVGTLPS------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILL 674
                   +  G +P       +G   +VPV + L+  +S +RL +P DLR LD+RQS+  
Sbjct: 691  CSPKAIKSADGDIPKPCGPDEKGEMQVVPVLMHLVKRISSVRLYIPKDLRSLDSRQSVGK 750

Query: 675  AVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCF 734
            ++QE++ RFP GLP L+P++DM I+D  +  +V +IE LEH+++ HPL+K  + +++   
Sbjct: 751  SIQEVKKRFPDGLPLLDPIEDMGIKDDGLKKIVRKIEMLEHRMYTHPLHKDPELDKLYSL 810

Query: 735  -QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
             ++KA V++EI+  + +++ ++     DELK R RVL++LG+  A  V+++KGR AC + 
Sbjct: 811  CEKKAMVSNEIRAARKELKRARTILQLDELKCRKRVLRRLGYATASDVIEVKGRVACELS 870

Query: 794  TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
            +GDELL+TE++FNG FN+L   Q  AL SCFI  ++S E   LR ELA PL+Q+QESAR+
Sbjct: 871  SGDELLLTEMIFNGVFNELTTEQSVALLSCFICEERSDEMPKLREELAGPLRQMQESARR 930

Query: 854  IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            IA++  E K+E++V+EYVE   RP +MDV++ W+ G++F+++ +MTDIFEGS+IR  RRL
Sbjct: 931  IAKVSQEAKMELDVEEYVEK-FRPHIMDVVFAWANGSSFSQICKMTDIFEGSVIRCMRRL 989

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  EELLRQMCQAAKAIGNTELENKFAEGIVKIKRDIVFAASLYL 1031


>gi|260811728|ref|XP_002600574.1| hypothetical protein BRAFLDRAFT_205455 [Branchiostoma floridae]
 gi|229285861|gb|EEN56586.1| hypothetical protein BRAFLDRAFT_205455 [Branchiostoma floridae]
          Length = 961

 Score =  996 bits (2574), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/956 (51%), Positives = 669/956 (69%), Gaps = 54/956 (5%)

Query: 36  RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           ++C HEVA P      K E +      P      AK Y F LDPFQ+ ++ CLE N+SVL
Sbjct: 24  QACTHEVAYPED---CKYEPVKELSTTP------AKVYPFVLDPFQKEALRCLESNQSVL 74

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT VAEYAIAM+ RDKQRVIYT+P+KALSNQKYREL++EF+DVGLMTGDVT+
Sbjct: 75  VSAHTSAGKTVVAEYAIAMSLRDKQRVIYTTPIKALSNQKYRELYEEFQDVGLMTGDVTI 134

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+II LP  + 
Sbjct: 135 NPTASCLVMTTEILRSMLYRGSELMREVAWVVFDEIHYMRDKERGVVWEETIILLPDNVH 194

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            VFLSAT+ NA QFAEWIC LHKQPCHVVYTD+RP PLQHY+FP GG GL+LVVDE   F
Sbjct: 195 YVFLSATIPNARQFAEWICWLHKQPCHVVYTDYRPVPLQHYIFPAGGDGLHLVVDETGSF 254

Query: 276 REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
           REDNF          + GG    G    R +K G   G S+ FKIVKMIMER F PVI F
Sbjct: 255 REDNFNTAMAVL---RDGGDNSKG---DRWSKKGFTKGPSNAFKIVKMIMERNFAPVIAF 308

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SFS++ECE +A+ MSKLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 309 SFSKKECEAYALQMSKLDFNTDEEKKLVEEVFFNAIDCLSDEDKKLPQVEHVLPLLKRGI 368

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP++KE +E+LF EGL+KALFATETF+MGLNMPA+TV+FT+ +K+DG   R++
Sbjct: 369 GIHHGGLLPILKETIEILFSEGLIKALFATETFSMGLNMPARTVLFTSARKFDGKDFRWV 428

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEYIQMSGRAGRRG D+RGI I+M+DE+M  +  K+++ G P PL S F L+Y  +LN
Sbjct: 429 SSGEYIQMSGRAGRRGLDERGIVILMIDEKMGPSVGKNLLKGAPDPLNSAFHLTYNMVLN 488

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
           L+ R E +   E +++ SF+Q+Q   ++P +  K+ KL+E+  ++    E  +  Y+KL+
Sbjct: 489 LL-RVE-EINPEFMLEKSFYQYQNYSSIPAMITKLQKLQEDYNAMSVPEEDSITAYYKLR 546

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS-------- 627
             + +  +++ + I +P+  L +L  GRL+KVR    D+GWGVV+N  KK +        
Sbjct: 547 QQLDKHGQEIEAFIQKPKYCLPFLQPGRLVKVRNEADDFGWGVVINFQKKANQKAPNNST 606

Query: 628 ------AGVGTL---------------PSRGGG----YIVPVQLPLISTLSKIRLSVPPD 662
                 A V  L               P R G      +VP+ L LI ++S +RL +P D
Sbjct: 607 AEPLYVAEVLLLCSKESVRNASTESAKPCRAGEKGEMVVVPIMLQLIRSISSVRLYIPKD 666

Query: 663 LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
           LRPLD R+S+L ++QE++ RFP G+P L+P++DM I+D ++   V +IE  EH++++HPL
Sbjct: 667 LRPLDNRESVLKSIQEVQRRFPHGVPLLDPIEDMGIKDDQLKTTVRKIEAFEHRMYSHPL 726

Query: 723 NKSQDENQIRCF-QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
           +  Q   ++    ++KA++  E++  K +++ ++     DELK R RVL++LG+     V
Sbjct: 727 HSDQRLPELYSLVEKKAQLAGELKAAKREVKKARTIIQMDELKCRKRVLRRLGYATTADV 786

Query: 782 VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
           +++KGR AC I + DELL+TE++FNG FNDLD HQ  AL S F+  +K+SE   L  ELA
Sbjct: 787 IEMKGRVACEISSADELLLTEMIFNGVFNDLDAHQCVALLSVFVFQEKASEMPRLTEELA 846

Query: 842 KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            PL+Q+QESAR+IA++  E K+ ++ ++YVES  RP +MDV + WSKGATF ++ +MTDI
Sbjct: 847 GPLRQMQESARRIAKVSAEAKMSIDEEDYVES-FRPHMMDVCHAWSKGATFGQICKMTDI 905

Query: 902 FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS--ESLRRGIMFSNSLYL 955
           FEGSIIR  RRL+E + ++  AA+A+G   LE KFA       ++R I+F+ SLYL
Sbjct: 906 FEGSIIRCMRRLEELMREMCHAAKAIGNTELENKFADGKCITKIKRDIVFAASLYL 961


>gi|405973895|gb|EKC38584.1| Superkiller viralicidic activity 2-like 2 [Crassostrea gigas]
          Length = 1025

 Score =  995 bits (2573), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/953 (52%), Positives = 671/953 (70%), Gaps = 51/953 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C+HEVA+P          +      P      AK Y F LDPFQ+ ++ CLE N+SVLV
Sbjct: 90   ACLHEVAIPPEAEFV---PLKPMMEKP------AKEYPFILDPFQKEALLCLENNQSVLV 140

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VA YAIAM+ RDKQRVIYTSP+KALSNQKYREL++EF+DVGLMTGDVT++
Sbjct: 141  SAHTSAGKTVVAVYAIAMSLRDKQRVIYTSPIKALSNQKYRELYEEFQDVGLMTGDVTIN 200

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P ASCLVMTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  +  
Sbjct: 201  PTASCLVMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDNVHY 260

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEWICHLH QPCHVVYTD+RPTPLQHY+FP G +G+Y+VVDE  +FR
Sbjct: 261  VFLSATIPNARQFAEWICHLHHQPCHVVYTDYRPTPLQHYIFPAGSNGIYMVVDENGEFR 320

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            E+NF          +  G    G   GR  +GG  +  S+ F IVKMIMER F PVIVFS
Sbjct: 321  EENFSTAMSVL---RDAGGAAKGDQRGR--RGGFKAAESNCFNIVKMIMERNFAPVIVFS 375

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FS+++CE +A+ MSKL+FN++EEK  V++VF NA+D L+++D+ LP +E +LPLL++GI 
Sbjct: 376  FSKKDCEAYALQMSKLNFNSEEEKALVDEVFNNAIDNLSDDDKKLPQVEHVLPLLRKGIG 435

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHHSGLLP++KE +E+LF EGL+KALFATETF+MGLNMPA+TV+FTA +K+DG   R++ 
Sbjct: 436  VHHSGLLPLLKETIEILFSEGLIKALFATETFSMGLNMPARTVLFTAARKFDGKDFRWVT 495

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRG DDRGI I+MVDE++  +  K +V G+  PL S F L+Y  +LNL
Sbjct: 496  SGEYIQMSGRAGRRGIDDRGIVILMVDEKISPSVGKQIVKGQADPLNSAFHLTYNMVLNL 555

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R E +   E++++ SF+QFQ   ++P++ +K+   EE+   L    E  VA Y+K++ 
Sbjct: 556  L-RVE-EINPEYMLERSFYQFQNYASIPELCEKLKDTEEKYNKLTVENEDSVASYYKIRQ 613

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK------PSAG- 629
             +  L K+L++ I +P+ +L +L  GRL++V+    D+GWG V+N  KK      PS   
Sbjct: 614  QLDNLGKELLTFIQKPQYILPFLQPGRLVQVKNEKDDFGWGAVINFQKKANQSKTPSGAE 673

Query: 630  --------------------VGTLP-----SRGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
                                V T+       +G   +VPV + LI  +S +RL +P DLR
Sbjct: 674  SSYVVEVLLNLSRETSRSKDVNTIKPCPKGEKGEMQVVPVLVHLIQAISAVRLYIPSDLR 733

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
            P D RQS+L ++QE+E RFP G+P L+P++DM I++  + D+V + E  EH++++HPL+K
Sbjct: 734  PPDNRQSVLKSIQEVEKRFPDGIPLLDPIEDMGIKEKGLKDIVKKTEAFEHRMYSHPLHK 793

Query: 725  SQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
              + EN    +Q KA+V +EI+ +KS+++  +     DELK R RVL+++G+  A  V++
Sbjct: 794  DSNLENLYTQYQSKAQVGNEIRAIKSELKKKKSLLQMDELKCRKRVLRRMGYCTASDVIE 853

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAK 842
            LKGR AC I +GDELL+TEL+FNG FNDL H Q  AL SCF+   + SSE   L  EL+ 
Sbjct: 854  LKGRVACEISSGDELLLTELLFNGVFNDLTHQQCCALVSCFVFQENASSETPKLTEELSG 913

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+ +Q++AR+IA +  E KLE+N ++YV ST +P +MDV+  W  GATF+++ +MT+IF
Sbjct: 914  PLRIMQDTARRIARVSIEAKLEMNEEDYV-STFKPHMMDVVNAWCNGATFSQICKMTNIF 972

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L QL  AA+A+G   LE KFA    S++R I+F+ SLYL
Sbjct: 973  EGSIIRCMRRLEETLRQLMQAAKAIGNSELENKFAEGIRSIKRDIVFAASLYL 1025


>gi|355719541|gb|AES06635.1| superkiller viralicidic activity 2-like 2 [Mustela putorius furo]
          Length = 1033

 Score =  993 bits (2566), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/943 (52%), Positives = 656/943 (69%), Gaps = 55/943 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKR 1032


>gi|431908599|gb|ELK12192.1| Superkiller viralicidic activity 2-like 2 [Pteropus alecto]
          Length = 1040

 Score =  993 bits (2566), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/953 (51%), Positives = 661/953 (69%), Gaps = 57/953 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSA   AGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSA--KAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 337  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 390

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 391  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 450

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 451  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 510

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 511  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 570

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 571  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 628

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 629  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 688

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 689  DPLYVVEVLLRCSRESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 749  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 809  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 869  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 928

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 929  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 987

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 988  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|395735808|ref|XP_002815609.2| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Pongo
            abelii]
          Length = 1049

 Score =  992 bits (2564), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/935 (52%), Positives = 653/935 (69%), Gaps = 55/935 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFA 1024


>gi|417405666|gb|JAA49537.1| Putative cytoplasmic exosomal rna helicase ski2 dead-box superfamily
            [Desmodus rotundus]
          Length = 1040

 Score =  991 bits (2561), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 502/954 (52%), Positives = 669/954 (70%), Gaps = 57/954 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ ++SVL
Sbjct: 108  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNSQSVL 156

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 157  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276  REDNFVKLQDTFLK-QKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            REDNF    DT ++  +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+
Sbjct: 337  REDNF----DTAMQVLRDAGDLAKGDLKGR--KGGT-RGPSNVFKIVKMIMERNFQPVII 389

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRG
Sbjct: 390  FSFSKKDCEAYALQMTKLDFNTDEEKRMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRG 449

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+
Sbjct: 450  IGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRW 509

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +L
Sbjct: 510  ISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVL 569

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NL+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K+
Sbjct: 570  NLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKSSEEQYNKIVIPNEESVVIYYKI 627

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP-------- 626
            +  +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK         
Sbjct: 628  RQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGE 687

Query: 627  --------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPD 662
                                SA     P+    +G   +VPV + L+S +S +RL +P D
Sbjct: 688  LDPLYVVEVLLRCSRESLENSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPRD 747

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            LRPLD RQS+L ++QE++ RFP G+P L+PV DM I+D  +  ++ ++E  EH++++HPL
Sbjct: 748  LRPLDNRQSVLKSIQEVQKRFPDGVPLLDPVDDMGIQDQGLKKIIQKVEAFEHRMYSHPL 807

Query: 723  -NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
             N    E      +RKA++  +I+  K +++ ++     DELK R RVL++LG   +  V
Sbjct: 808  HNDPGLETVYTLCERKAQIALDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDV 867

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            +++KGR AC I + DELL+TE+MFNG FNDL   Q AAL SCF+  + SSE   L  +LA
Sbjct: 868  IEMKGRVACEISSADELLLTEMMFNGLFNDLSAAQAAALLSCFVFQENSSEMPKLTEQLA 927

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV++ W+ GATFA + +MTD+
Sbjct: 928  GPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVHTWATGATFAHICKMTDV 986

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 987  FEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1040


>gi|281337521|gb|EFB13105.1| hypothetical protein PANDA_018033 [Ailuropoda melanoleuca]
          Length = 1026

 Score =  990 bits (2560), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/935 (52%), Positives = 653/935 (69%), Gaps = 55/935 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 931  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA
Sbjct: 990  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFA 1024


>gi|440795221|gb|ELR16357.1| hypothetical protein ACA1_204440 [Acanthamoeba castellanii str.
           Neff]
          Length = 986

 Score =  985 bits (2547), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 516/981 (52%), Positives = 674/981 (68%), Gaps = 56/981 (5%)

Query: 24  EEESTKKQR--NLTR--SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDP 79
           EE+ +K+Q   NL    +C HEV++P G+ +   E       NP       + Y F LDP
Sbjct: 13  EEQPSKEQADPNLRSYVACKHEVSIPVGFEVPGGEEGMRELMNPPDPVNPVRKYPFTLDP 72

Query: 80  FQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL 139
           FQR+S+ACLER +SVLVSAHTSAGKT VAEYAIAM  RDKQRVIYTSP+KALSNQKYREL
Sbjct: 73  FQRLSIACLERGDSVLVSAHTSAGKTVVAEYAIAMGLRDKQRVIYTSPIKALSNQKYREL 132

Query: 140 HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRER 199
            +EFKDVGLMTGDVT++P+ASCLVMTTEILR MLYRGSEV++EVAWV+FDEIHYM+D ER
Sbjct: 133 LEEFKDVGLMTGDVTINPSASCLVMTTEILRNMLYRGSEVMREVAWVVFDEIHYMRDLER 192

Query: 200 GVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFP 259
           GVVWEE++I LP  ++ VFLSAT+ NA +F +WI  LH QPCHVVYTD+RPTPLQHY+FP
Sbjct: 193 GVVWEETLILLPDKVRYVFLSATLPNAIEFTDWIASLHHQPCHVVYTDYRPTPLQHYIFP 252

Query: 260 VGGSGLYLVVDEKEQFREDNFVKL-------QDTFLKQKIGGRRENGKASGRMAKGGS-G 311
            GG GL+LVVDEK  FREDNF K        + T   Q+ GGR   GK     ++GG+  
Sbjct: 253 AGGDGLFLVVDEKSTFREDNFQKALAVLAAGEATSSGQRGGGRAGGGKGHRDGSRGGNRR 312

Query: 312 SGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV 371
           + GSD +KIVKMIMER +QPVIVFSFS+++CE  A+ MSKLD NT +EK  VE VF NA+
Sbjct: 313 NTGSDCYKIVKMIMERNYQPVIVFSFSKKDCEGMALQMSKLDLNTDDEKKLVESVFFNAI 372

Query: 372 DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
           D L+++D+ LP +E +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETFAMG
Sbjct: 373 DSLSDDDKKLPQVEHILPLLKRGIGIHHGGLLPILKEVIEILFQEGLLKCLFATETFAMG 432

Query: 432 LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTL 491
           LNMPAKTVVFT V+K+DG   R I SGEYIQMSGRAGRRG DDRGI I+MVDE+ME  T 
Sbjct: 433 LNMPAKTVVFTNVRKFDGSQFRVISSGEYIQMSGRAGRRGLDDRGIVIMMVDEKMEPQTA 492

Query: 492 KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS 551
           K M++GK   L S+F L Y  +LNL+ R EG    E++IK SFHQFQ +K+LP   KK+ 
Sbjct: 493 KGMLMGKADALNSSFHLGYNMLLNLL-RVEG-VDPEYLIKKSFHQFQSDKSLPMKEKKLL 550

Query: 552 KLEEEAA-SLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
            LEE+    +   GE  V EY+ L+  + +L++     + +P   L +L  GRL++V EG
Sbjct: 551 DLEEKVKREMAVQGEEIVEEYYLLREQLQKLKRVFTDTMNQPIYCLPFLQPGRLVRVTEG 610

Query: 611 GTDWGWGVVVNVVKKP---SAGVGTLPSRGGGYI-------------------------- 641
             +WGWGVVVN  KK      G+G+    GG YI                          
Sbjct: 611 KNEWGWGVVVNFQKKAGHDDRGMGS----GGHYIVDVLLKCAPADTNQKLFTPKPCPPGQ 666

Query: 642 ------VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKD 695
                 VPV LPLI  +S +R+ VP DLR  DAR+S+   + E+  RF  G+P L+P++D
Sbjct: 667 EGQIEVVPVLLPLIDGISSVRVYVPKDLRTPDARKSVGKTLAEVHKRFNDGVPLLDPIED 726

Query: 696 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS 754
           M IED     ++ +IE LE +L ++P  K    E +   + +K +  +EI+ L+ +++ S
Sbjct: 727 MHIEDDNFKKIIRKIEMLEDRLNSNPAFKEPSLEQRYALYVKKMDAENEIKLLRKQIKSS 786

Query: 755 QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
           +    +D+LK   RVL++LG  + D ++++KGR AC I + DEL++TEL+F G  NDL+ 
Sbjct: 787 EGIVLKDQLKCMKRVLRRLGLTNKDNIIEVKGRVACEISSADELVLTELIFTGVLNDLNV 846

Query: 815 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
            Q+ +L SCF+  +KS     L  ELA PL+ LQ++ARKIA I  ECKL + V++YVE  
Sbjct: 847 EQIVSLMSCFVFEEKSESAQRLADELAGPLRSLQDAARKIATISQECKLPMEVEDYVEK- 905

Query: 875 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            +P +MD++Y W KGA FA++ +MT+IFEGSIIR+ RRL+E L QL +A++A+G   LE 
Sbjct: 906 FKPHMMDIVYAWCKGAKFADICKMTNIFEGSIIRTMRRLEELLRQLCSASKAIGNTELEA 965

Query: 935 KFAAASESLRRGIMFSNSLYL 955
           KFA     ++R I+F+ SLYL
Sbjct: 966 KFAEGINKIKRDIVFAVSLYL 986


>gi|158298455|ref|XP_318627.4| AGAP009600-PA [Anopheles gambiae str. PEST]
 gi|157013889|gb|EAA14456.4| AGAP009600-PA [Anopheles gambiae str. PEST]
          Length = 1036

 Score =  984 bits (2544), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/954 (51%), Positives = 665/954 (69%), Gaps = 53/954 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEVAV   Y   K   +      P      AK Y+F LDPFQ+ ++ C+E N+SVLV
Sbjct: 101  ACTHEVAV---YPDQKYMPLAPATGKP------AKEYAFVLDPFQKEAILCIENNQSVLV 151

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA +  DKQRVIYT+P+KALSNQKYRE H+EFKDVGL+TGDVT++
Sbjct: 152  SAHTSAGKTVVAEYAIAKSLADKQRVIYTTPIKALSNQKYREFHEEFKDVGLVTGDVTIN 211

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 212  PSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 271

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++LVVDE+ QF+
Sbjct: 272  VFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYLFPAGGDGIHLVVDERGQFK 331

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            EDNF    +     +  G    G   GR  KGG   S +G ++IFKIVKMIMER F PVI
Sbjct: 332  EDNFNTAMNVL---QTAGEAAKGDQKGR--KGGLKASNAGETNIFKIVKMIMERSFAPVI 386

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFN+  EK  V++VF NA+D L EEDR LP +E +LPLL+R
Sbjct: 387  IFSFSKKDCEVYAMQMAKLDFNSSTEKKLVDEVFNNAMDVLTEEDRQLPQVENVLPLLRR 446

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT+ +K+DG   R
Sbjct: 447  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTSPRKFDGKDFR 506

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            ++ SGEYIQMSGRAGRRG DD+GI I+M+DE +     KD+V G+  P+ S F L+Y  +
Sbjct: 507  WVTSGEYIQMSGRAGRRGLDDKGIVILMIDEAVSPAVGKDIVQGRADPINSAFHLTYNMV 566

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF QFQ + ++P+I K+V K +++  +++   E  +  YH 
Sbjct: 567  LNLL-RVE-EINPEYMLERSFFQFQNQSSIPEIYKRVQKKQKQLLAVEIKDEQSIISYHH 624

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
            ++  + +L ++    ITRP  ++ +L  GR+IK++    ++ WG++VN  KK +A     
Sbjct: 625  VREQLDRLGQEFREYITRPVYLVPFLQPGRMIKIQSDAGEFEWGIIVN-FKKENADSKQN 683

Query: 634  P-------------------------------SRGGGYIVPVQLPLISTLSKIRLSVPPD 662
            P                                RG   +VPV   L+S +S +R+  P D
Sbjct: 684  PLKTEQKVVIDVLLHVADGFEKEGIPKPCPPGKRGSVEVVPVLHKLVSRISSLRVYYPND 743

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            LRP D R+S+L  ++E++ RFPQG P LNP+ DM I++ E   +V+ I++ E +LFAHPL
Sbjct: 744  LRPADNRRSVLKTIEEVKKRFPQGPPLLNPITDMHIKEKEFQGIVDMIDKFEKRLFAHPL 803

Query: 723  NKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            ++S    ++   +  K E+  E++  K+ +R+++      ELK+R RVL++LG+  A  V
Sbjct: 804  HESAGLERLYAQYMSKLELEKELRNEKNALREARSLLQMSELKHRKRVLRRLGYCTAADV 863

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            ++ KGR AC +   DELL+TE++FNGTF DL   Q  AL SCF+  +KSSE      EL+
Sbjct: 864  IEFKGRVACELSCADELLITEMVFNGTFTDLTPSQSCALLSCFVCDEKSSEMPAATHELS 923

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             PL+Q+Q+ AR+IA++ NECK+EV+ + YVES  +PFLMDV+ CW KGA+FA++ +MTDI
Sbjct: 924  GPLRQMQDLARRIAKVSNECKVEVDEERYVES-FKPFLMDVVLCWCKGASFAQLCKMTDI 982

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            FEGSIIR  RRL+E L Q+  A++ +G  +LE KF+ A   L+R I+F+ SLYL
Sbjct: 983  FEGSIIRCMRRLEELLRQMVQASKTIGNTDLENKFSEAIRLLKRDIVFAASLYL 1036


>gi|391335944|ref|XP_003742345.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Metaseiulus occidentalis]
          Length = 1020

 Score =  975 bits (2521), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/955 (51%), Positives = 661/955 (69%), Gaps = 52/955 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVAVPSG   T  E         V  G  A+ Y F LDPFQ+ ++ C+E  +SVLV
Sbjct: 82   SCSHEVAVPSGQEFTPLE---------VKVGAPAREYQFVLDPFQKEAILCIENEQSVLV 132

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA+A ++KQRVIYT+P+KALSNQKYRE ++EFKDVGLMTGDVT++
Sbjct: 133  SAHTSAGKTVVAEYAIALALKNKQRVIYTTPIKALSNQKYREFYEEFKDVGLMTGDVTIN 192

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  +  
Sbjct: 193  PTASCLIMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDNVHY 252

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEWIC+LHKQPCHVVYT++RP PLQHY+FP GG GL+LVVDEK  F+
Sbjct: 253  VFLSATIPNARQFAEWICYLHKQPCHVVYTEYRPVPLQHYIFPAGGDGLHLVVDEKGVFK 312

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            EDNF  L  T L+   G  +  G A  R  KGG  S  ++ +KIVKMIMER + PVI+FS
Sbjct: 313  EDNF-NLVMTTLQSAAGNAK--GDAGLRGKKGGFRS-DTNCYKIVKMIMERDYSPVIIFS 368

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FS+RECE +A  MSKLD N+ EEK  V +VF NA++ L++EDR LP ++ +LPLL RGIA
Sbjct: 369  FSKRECEAYATQMSKLDLNSAEEKKLVNEVFNNAMEALSDEDRELPQVQNVLPLLMRGIA 428

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG S R++ 
Sbjct: 429  IHHGGLLPILKETIEILFSEGLIKALFATETFAMGLNMPARTVLFTNARKYDGQSFRWVT 488

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRG DDRGI I+M+DE+M   + KD+V G P  + S F L+Y  +LNL
Sbjct: 489  SGEYIQMSGRAGRRGLDDRGIVILMIDEKMSSQSAKDIVKGAPDAINSAFHLTYNMVLNL 548

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R EG    E++++ SF QFQ   ++P + +++  L+E+  S+    E EVA Y K+  
Sbjct: 549  L-RVEG-INPEYMLERSFFQFQNYASIPQLYQRLDALQEQYDSMQVDREDEVAAYFKVDQ 606

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK----------- 625
             +++ + +L S I +P+ V+ +L +GR+I VR    D+GWG+V+N   K           
Sbjct: 607  QLSKCKNELRSFIFKPQYVVPFLQAGRMIHVRNKEDDFGWGIVINYKNKRIQSKVRMESL 666

Query: 626  ------------------PSA----GVGTLPS--RGGGYIVPVQLPLISTLSKIRLSVPP 661
                              P A     +   P   RG   +VP++L L+  +S +RL  P 
Sbjct: 667  HSELRDVQVIVEALIYVSPGATEAESIKPAPKGVRGEMQVVPIRLDLVEEISSVRLLYPS 726

Query: 662  DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
            DLRPLD R S+L ++ E+E RFP+G+P L+P+ D+ I++ E  +LV QI  L+ +L   P
Sbjct: 727  DLRPLDNRMSVLKSINEVEKRFPRGIPLLDPIDDLGIKEKEAKELVKQIAALDERLRTLP 786

Query: 722  LNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
            L+   D ++  + +  K  V  +++Q K+ ++  +     DELK R RVL++LGH +   
Sbjct: 787  LHTEPDLQSLYKAYLAKQGVAEQVKQCKNDIKRGKSLLQMDELKCRKRVLRRLGHCNNAD 846

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
            ++ +KGR AC I T DELL+TE++FN  FNDL+  Q  AL SC +  +KS+E   L  +L
Sbjct: 847  IIDVKGRIACEISTADELLLTEMIFNNVFNDLNPAQCNALLSCLVFQEKSNEMPKLTEDL 906

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
             +PL+ +Q+ AR+IA++ ++ KLEVN ++Y++   +P LMDV+Y WSKGA+FA++ +MTD
Sbjct: 907  MQPLRMMQDMARRIAQVAHDSKLEVNEEDYIDQ-FKPHLMDVVYGWSKGASFAQICKMTD 965

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +FEGSIIR  RRL+E L Q+  AA+++G   LE KF+ A   ++R I F+ SLYL
Sbjct: 966  VFEGSIIRCMRRLEELLRQMVQAAKSIGNTELETKFSEAIRLIKRDIAFAASLYL 1020


>gi|328792378|ref|XP_003251718.1| PREDICTED: superkiller viralicidic activity 2-like 2-like isoform 1
            [Apis mellifera]
          Length = 1035

 Score =  975 bits (2520), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/951 (51%), Positives = 659/951 (69%), Gaps = 52/951 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--AKTYSFELDPFQRVSVACLERNESV 94
            SC HEVAVP  Y              P+ N +   AK Y F LDPFQ+ ++ C+E N+SV
Sbjct: 105  SCTHEVAVPPDYEYI-----------PLENKQSKPAKEYKFVLDPFQKEAILCIENNQSV 153

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE  +EFKDVGL+TGDVT
Sbjct: 154  LVSAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFFEEFKDVGLVTGDVT 213

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +
Sbjct: 214  INPTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNV 273

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA QF EW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  Q
Sbjct: 274  HYVFLSATIPNARQFVEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEMGQ 333

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQP 331
            F+E+NF +     L+     +   G + GR  KGG   S +G ++IFK+VKMIMER F P
Sbjct: 334  FKEENFNRAM-ACLQHSDAAK---GDSKGR--KGGIRPSNAGQTNIFKMVKMIMERNFAP 387

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VI+FSFS+++CE +AM M+KLD NT EEK  V++VF NA+D LNEEDR LP +E +LPLL
Sbjct: 388  VIIFSFSKKDCEIYAMQMAKLDLNTLEEKKLVDEVFNNAMDVLNEEDRRLPQVENVLPLL 447

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG  
Sbjct: 448  RRGIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTASRKFDGKD 507

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y 
Sbjct: 508  FRWITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYN 567

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +LNL+ R E +   E++++ SF+QFQ + ++PD+  KV  L+    ++       ++ Y
Sbjct: 568  MVLNLL-RVE-EINPEYMLERSFYQFQNQASIPDLYNKVKDLQGAYNAVTIDRYNHISSY 625

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV--------- 622
            H ++  +  L  +    +T+PE +L +L  GRL+KV+     + WG++VN          
Sbjct: 626  HDIREQLEHLSTEFRCFLTKPEYLLPFLQPGRLVKVKNENEMFDWGIIVNFKKKNPKNPI 685

Query: 623  -------------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                         + K S+    +P R    G   +VPV   LIS +S +RL  P DLRP
Sbjct: 686  RENTVIIIDILLHISKNSSEGCPVPCREGEEGDMEVVPVIHTLISQISSLRLYYPKDLRP 745

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
             D R+S+L  +QE++ RFP G P LNP+ DM IED    D+V +IE LE KL+AHPL+K 
Sbjct: 746  SDNRKSVLKTIQEVKKRFPDGPPLLNPITDMHIEDDAFKDIVKKIEVLEEKLYAHPLHKD 805

Query: 726  QDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             + N +   F  K ++ ++++Q K +++ ++     DELK R RVL+++ +  A  V++L
Sbjct: 806  PNVNILYEQFLHKEDLGNQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIEL 865

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKS+E      EL+ PL
Sbjct: 866  KGRVACELNGADELLMTEMIFNGLFNSLSVPQMVALISCFVCDDKSNEMPKSTEELSGPL 925

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W KGATF ++ +MTDIFEG
Sbjct: 926  RQMQDLARRIAKVSTEANLELDEDTYVER-FKPYLMDVVYAWCKGATFLQICKMTDIFEG 984

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 985  SIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1035


>gi|390335872|ref|XP_001197942.2| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Strongylocentrotus purpuratus]
          Length = 1024

 Score =  974 bits (2518), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/952 (50%), Positives = 661/952 (69%), Gaps = 52/952 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P        E             + AK Y F LDPFQ+ ++ CLE N+SVLVS
Sbjct: 91   CTHEVAIPIEEEYKPLEPT---------TKKAAKDYPFILDPFQKEAIKCLENNQSVLVS 141

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIAM+ RDKQRVIYT+P+KALSNQKYREL +EF+DVGLMTGDVT++P
Sbjct: 142  AHTSAGKTVCAEYAIAMSLRDKQRVIYTTPIKALSNQKYRELFEEFQDVGLMTGDVTINP 201

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
            +ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ RGVVWEE+II LP  +  V
Sbjct: 202  SASCLIMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKNRGVVWEETIILLPDNVHYV 261

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHVVYT++RP PLQHY+FP GG GL+LVVDEK +FR+
Sbjct: 262  FLSATIPNAKQFAEWICHLHKQPCHVVYTEYRPVPLQHYIFPAGGDGLHLVVDEKCEFRQ 321

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          + GG    G   GR  +GG+  G S+IFKIVKM+MER FQPVIVFSF
Sbjct: 322  DNFNAAMQVL---RDGGDAAKGDQRGR--RGGT-KGPSNIFKIVKMVMERSFQPVIVFSF 375

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S++ECE + + +SKLDFNTQEEK  V +VF NA+DCL+EED+ LP +E +LPLLKRG+ +
Sbjct: 376  SKKECEAYGLQVSKLDFNTQEEKTLVVEVFNNAMDCLSEEDKKLPQVENVLPLLKRGVGI 435

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HHSGLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG   R+I S
Sbjct: 436  HHSGLLPILKETIEILFSEGLIKALFATETFAMGLNMPARTVIFTNPRKFDGKDFRWITS 495

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+M+DE+M     KD++ G+P PL S F L+Y  ++NL+
Sbjct: 496  GEYIQMSGRAGRRGLDDRGIVILMIDEKMSPGVGKDILQGQPDPLNSAFHLTYNMVMNLL 555

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R EG    E++++ SF QFQ   A+P++ +K+ KLEEE  ++    E  V  Y+K++  
Sbjct: 556  -RVEG-INPEYMLERSFFQFQSYTAIPELFEKLRKLEEEYNTMTIPQEDSVESYYKIRQQ 613

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            + +L K++ + IT+P+  L ++  GRL+KV+ G   +GWGVVVN  +K            
Sbjct: 614  LKKLAKEIQAFITKPKYCLPFMQPGRLLKVKNGEDLFGWGVVVNFRRKANQKMNNPKDDS 673

Query: 627  ------------------SAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDLR 664
                              +A     P + G      +VP+ L LIS +S +R+ +P DLR
Sbjct: 674  PLYIAEVLLNCSQESVKNAASESAKPPKEGEKGEMTVVPIMLHLISEVSSVRVYLPKDLR 733

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
            P D RQS+  ++QE++ RFP GLP L+PV+DM I+D  +  +V ++E  E ++++H L+ 
Sbjct: 734  PPDNRQSVGKSIQEVQRRFPDGLPLLDPVEDMGIKDEALRKVVEKVEAFEERMYSHKLHT 793

Query: 725  SQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
              + E     +++KA++  +I++ K +++ ++     DELK R RV++++G      V++
Sbjct: 794  DPELEKLYGLYEKKAQLADQIREAKRELKKARTIIQMDELKCRKRVIRRMGFATPADVIE 853

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC I + DEL++TE++FNG FN L   +   L SCF+  +KS E   L  ++A  
Sbjct: 854  TKGRVACEISSADELVLTEMIFNGLFNPLTAEECVTLMSCFVFEEKSKETPKLTSQVATA 913

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+QLQ++AR+IA++  E KLE++ ++YV S  +  LM+V+Y W+ GA+F+++ +MTD FE
Sbjct: 914  LRQLQDTARRIAKVSMEAKLEIDEEDYVMS-FKSTLMEVVYAWASGASFSQICKMTDTFE 972

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E + ++  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 973  GSIIRCMRRLEELMKEMCHAAKAIGNTELENKFAEGIVKIKRDIVFAASLYL 1024


>gi|307103160|gb|EFN51423.1| hypothetical protein CHLNCDRAFT_28067, partial [Chlorella
           variabilis]
          Length = 955

 Score =  974 bits (2518), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/949 (51%), Positives = 657/949 (69%), Gaps = 55/949 (5%)

Query: 58  GTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF- 116
           GT   P + G +AK Y F LDPFQ  ++AC+ER ESVLV+AHTSAGKT VAEYAIA AF 
Sbjct: 11  GTIEAPRWGGPLAKQYPFVLDPFQTAAIACIERRESVLVAAHTSAGKTVVAEYAIAKAFA 70

Query: 117 RDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
           +D QRV+YTSPLKALSNQKYREL +EF DVGLMTGDVTL+P A C+VMTTEILR M+YR 
Sbjct: 71  QDGQRVVYTSPLKALSNQKYRELAEEFGDVGLMTGDVTLNPTARCIVMTTEILRSMIYRA 130

Query: 177 SEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHL 236
           SE L+++AWV+FDE+HYM+DRERGVVWEE++IF+P   +MVFLSAT+ NA +FA+W+ +L
Sbjct: 131 SEFLRDIAWVVFDEVHYMQDRERGVVWEETMIFMPKTSRMVFLSATLPNAFEFAQWVSYL 190

Query: 237 HKQPCHVVYT---DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT-FLKQKI 292
           H QPCHVVYT   D+RPTPL HY FP GG GLYL+VDE+  FR++NF KL+      +++
Sbjct: 191 HTQPCHVVYTGAPDYRPTPLLHYAFPSGGKGLYLLVDERGNFRDENFAKLRRVGAAGRRL 250

Query: 293 GGRRENGKASGRMAKGGSGSGGS---DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
             R+  G+  G   K G   G S   D+ K+VK+I +R ++P IVFSFSRRECE +A  +
Sbjct: 251 HRRKSGGRGFGGEGKDGKQQGPSTSEDLQKLVKLIKDRSYEPAIVFSFSRRECELYANDL 310

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
            K     +EEKD V +VF +A+ CL EEDR+LP I  ML +L+ GI VHHSGLLP++KEL
Sbjct: 311 FK---KAKEEKDAVAEVFNSAIQCLKEEDRSLPFITAMLAMLQAGIGVHHSGLLPILKEL 367

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
           VE+LF E L+K LF+TETFAMGLNMPA+T VFTA++KWDG+ +R+IGSGEYIQMSGRAGR
Sbjct: 368 VEILFGEQLIKCLFSTETFAMGLNMPARTCVFTALRKWDGEENRWIGSGEYIQMSGRAGR 427

Query: 470 RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG-QFTAEH 528
           RGKDDRG+  +MVD  ++  T K M+ GK +PL+S+F+LSYY++LNLM R E  ++  E+
Sbjct: 428 RGKDDRGLVFLMVDGALDEPTAKSMMQGKASPLLSSFKLSYYTVLNLMRRLEDTEYDMEY 487

Query: 529 VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSE 588
           VI  SF QFQ+E+ LP +  ++  +E E+ ++ A+ +A   EY   K D+ +    + + 
Sbjct: 488 VIGKSFSQFQHERQLPQLESRLKAIESESTAITAATDAAAEEYSAGKQDLEEQLAVVRAA 547

Query: 589 ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-PSAGVGTLPSRGGGYIV----- 642
           + +P+  +++L  GR+++V EG   WG+GVVV+  +K P    G   +    Y+V     
Sbjct: 548 MQQPQHCVHFLRPGRIVRVTEGARQWGFGVVVSAFRKQPQERQGVSEAAAAAYVVDTLLC 607

Query: 643 ---------------------------------PVQLPLISTLSKIRLSVPPDLRPLDAR 669
                                            PV LPLI+ +  +R+S+P DLRP ++R
Sbjct: 608 CAAPSGANGGSNGGGGEPTPADLAAENAEMQVIPVPLPLITEICTLRISIPGDLRPAESR 667

Query: 670 QSILLAVQELESRFPQG-LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL--NKSQ 726
           +++LL ++EL  ++  G LP L+PV DM ++D +V   ++    +  +L  +PL      
Sbjct: 668 KAVLLTLRELSLKYAGGQLPLLDPVADMGVQDGKVAAALDAAAAIRRRLAGNPLWQQGGG 727

Query: 727 DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
           D +QI   +RK+E++ E   +K +MR+SQ+  F+ E + RS VL+KLG IDA G+VQ KG
Sbjct: 728 DPSQIEALRRKSELSQEAAGIKRRMRESQLSSFKLESRQRSAVLRKLGFIDAGGMVQPKG 787

Query: 787 RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
           R AC ID  DELL  EL+ NGTF  LD HQ+ AL SC +PVD+++E++ L  ++A PL Q
Sbjct: 788 RVACEIDAADELLTAELLVNGTFGGLDKHQLVALVSCLVPVDRTNEKVKLSAQMAAPLGQ 847

Query: 847 LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
           LQ  AR IAE+ NEC LEV+ DEYVES  RP LMDVIY WSKGA+F EV  MTDIFEGSI
Sbjct: 848 LQAVARHIAEVSNECGLEVDADEYVES-FRPSLMDVIYGWSKGASFGEVCGMTDIFEGSI 906

Query: 907 IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           IR+ RRLDE + QL AAA  VGE  L  KF A+ +++RR I+F+ SLY+
Sbjct: 907 IRATRRLDELMQQLEAAAAVVGEKELAAKFGASRDTIRRDIIFAASLYI 955


>gi|115673398|ref|XP_789631.2| PREDICTED: superkiller viralicidic activity 2-like 2
            [Strongylocentrotus purpuratus]
          Length = 1024

 Score =  973 bits (2516), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/952 (50%), Positives = 662/952 (69%), Gaps = 52/952 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P        E             + AK Y F LDPFQ+ ++ CLE N+SVLVS
Sbjct: 91   CTHEVAIPIEEEYKPLEPT---------TKKAAKDYPFILDPFQKEAIKCLENNQSVLVS 141

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT  AEYAIAM+ RDKQRVIYT+P+KALSNQKYREL +EF+DVGLMTGDVT++P
Sbjct: 142  AHTSAGKTVCAEYAIAMSLRDKQRVIYTTPIKALSNQKYRELFEEFQDVGLMTGDVTINP 201

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
            +ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ RGVVWEE+II LP  +  V
Sbjct: 202  SASCLIMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKNRGVVWEETIILLPDNVHYV 261

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEWICHLHKQPCHVVYT++RP PLQHY+FP GG GL+LVVDEK +FR+
Sbjct: 262  FLSATIPNAKQFAEWICHLHKQPCHVVYTEYRPVPLQHYIFPAGGDGLHLVVDEKCEFRQ 321

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF          + GG  +  KA  R  +GG+  G S+IFKIVKM+MER FQPVIVFSF
Sbjct: 322  DNFNAAMQVL---RDGG--DAAKADQRGRRGGT-KGPSNIFKIVKMVMERSFQPVIVFSF 375

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S++ECE + + +SKLDFNTQEEK  V +VF NA+DCL+EED+ LP +E +LPLLKRG+ +
Sbjct: 376  SKKECEAYGLQVSKLDFNTQEEKTLVVEVFNNAMDCLSEEDKKLPQVENVLPLLKRGVGI 435

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HHSGLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG   R+I S
Sbjct: 436  HHSGLLPILKETIEILFSEGLIKALFATETFAMGLNMPARTVIFTNPRKFDGKDFRWITS 495

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DDRGI I+M+DE+M     KD++ G+P PL S F L+Y  ++NL+
Sbjct: 496  GEYIQMSGRAGRRGLDDRGIVILMIDEKMSPGVGKDILQGQPDPLNSAFHLTYNMVMNLL 555

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R EG    E++++ SF QFQ   A+P++ +K+ KLEEE  ++    E  V  Y+K++  
Sbjct: 556  -RVEG-INPEYMLERSFFQFQSYTAIPELFEKLRKLEEEYNTMTIPQEDSVESYYKIRQQ 613

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------- 626
            + +L K++ + IT+P+  L ++  GRL+KV+ G   +GWGVVVN  +K            
Sbjct: 614  LKKLAKEIQAFITKPKYCLPFMQPGRLLKVKNGEDLFGWGVVVNFRRKANQKMNNPKDDS 673

Query: 627  ------------------SAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDLR 664
                              +A     P + G      +VP+ L LIS +S +R+ +P DLR
Sbjct: 674  PLYIAEVLLNCSQESVKNAASESAKPPKEGEKGEMTVVPIMLHLISEVSSVRVYLPKDLR 733

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
            P D RQS+  ++QE++ RFP GLP L+PV+DM I+D  +  +V ++E  E ++++H L+ 
Sbjct: 734  PPDNRQSVGKSIQEVQRRFPDGLPLLDPVEDMGIKDEALRKVVEKVEAFEERMYSHKLHT 793

Query: 725  SQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
              + E     +++KA++  +I++ K +++ ++     DELK R RV++++G      V++
Sbjct: 794  DPELEKLYGLYEKKAQLADQIREAKRELKKARTIIQMDELKCRKRVIRRMGFATPADVIE 853

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC I + DEL++TE++FNG FN L   +   L SCF+  +KS E   L  ++A  
Sbjct: 854  TKGRVACEISSADELVLTEMIFNGLFNPLTAEECVTLMSCFVFEEKSKETPKLTSQVATA 913

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+QLQ++AR+IA++  E KLE++ ++YV S  +  LM+V+Y W+ GA+F+++ +MTD FE
Sbjct: 914  LRQLQDTARRIAKVSMEAKLEIDEEDYVMS-FKSTLMEVVYAWASGASFSQICKMTDTFE 972

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E + ++  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 973  GSIIRCMRRLEELMKEMCHAAKAIGNTELENKFAEGIVKIKRDIVFAASLYL 1024


>gi|320162936|gb|EFW39835.1| SKIV2L2 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 997

 Score =  972 bits (2512), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 497/967 (51%), Positives = 656/967 (67%), Gaps = 58/967 (5%)

Query: 35  TRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
           T  C HEVA+ +        A +   ++       AK+Y F LDPFQR +V CLE +ESV
Sbjct: 43  TERCTHEVAILTS-------ADYRPLSDARMPATPAKSYPFTLDPFQREAVRCLEHHESV 95

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
           LVSAHTSAGKT VAEYAIAM+ RDKQR IYT+P+KALSNQKYREL++EF DVGLMTGDVT
Sbjct: 96  LVSAHTSAGKTVVAEYAIAMSLRDKQRCIYTTPIKALSNQKYRELNEEFGDVGLMTGDVT 155

Query: 155 LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
           ++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE++I LP  +
Sbjct: 156 INPGASCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETMILLPDNV 215

Query: 215 KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
             VFLSAT+ NA +FA+WICHLH+QPCHVVYT FRPTPLQHY+FP GG GLYLVVDEK +
Sbjct: 216 HYVFLSATIPNAREFAQWICHLHRQPCHVVYTSFRPTPLQHYIFPGGGEGLYLVVDEKGE 275

Query: 275 FREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGG-----SDIFKIVKMIM 325
           FR+DNF K    L DT     +     + K S     G     G     SDIFKIVKMIM
Sbjct: 276 FRDDNFAKAMAILADTPEANALAASGSSNKNSKGGPGGKRKGAGGTGGPSDIFKIVKMIM 335

Query: 326 ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
           +R +QPVIVFSFS+RECE++A+ MSKLDFN   EK  V++VF NA+D L+E+DR LP ++
Sbjct: 336 DRSYQPVIVFSFSKRECEEYALQMSKLDFNNDAEKKLVDEVFSNAIDSLSEDDRKLPQVD 395

Query: 386 LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
            +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+KALFATETF+MGLNMPAKTVVFT+V+
Sbjct: 396 NILPLLRRGIGIHHSGLLPILKEVIEILFQEGLLKALFATETFSMGLNMPAKTVVFTSVR 455

Query: 446 KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
           K+DG   R++ SGEYIQMSGRAGRRG DDRGI I+MVDE+ME    K+++ G+  PL S 
Sbjct: 456 KFDGKDFRWVSSGEYIQMSGRAGRRGLDDRGIVILMVDEKMEPAVAKNLLKGEADPLNSA 515

Query: 506 FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
           F LSY  ILNL+ R E +   E++++ SF QFQ   A+P + KK  +LE++  ++    E
Sbjct: 516 FYLSYNMILNLL-RVE-EINPEYMLQRSFRQFQNNAAVPALHKKARQLEQQRNAISIPNE 573

Query: 566 AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK 625
             VAEY+ L+  +  L   L   + +P   L +L +GRL+ V +   DWGWG VVN  KK
Sbjct: 574 DRVAEYYHLRQQLEHLRVNLKDIVMQPANSLPFLQAGRLVHVTDNDQDWGWGAVVNYHKK 633

Query: 626 PSAGVG--------------------TLPSRG--------------GGYIVPVQLPLIST 651
            +   G                    +L ++G                 +VPV L  +  
Sbjct: 634 LTNAKGMAAAVDGSDAVVVVDVLLRCSLKTKGIEQPRPVRFDNDKAEVQVVPVVLDKVDK 693

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
           +S IR+ +  DL+  D R+++  ++ E++ RFP G+P L+P++DM + D     +V QIE
Sbjct: 694 ISTIRIYLAKDLKSSDNRRTVEKSILEVKRRFPDGIPVLDPIEDMNVRDDGTRKVVKQIE 753

Query: 712 ELEHKLFAHPLNKSQDENQIRCFQRKAE---VNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            LE +LF+H L+K  D N    F R +E   +  E++  + +++ SQ     DELK R R
Sbjct: 754 SLEQRLFSHALHK--DANLESLFNRYSEKIALGEEVRAARKQLKQSQTVLQMDELKCRKR 811

Query: 769 VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           VL++LG   +  VV LKGR AC I + DELL+TE++FNG FN+L   Q  AL SCF+  +
Sbjct: 812 VLRRLGFTSSSDVVDLKGRVACEISSADELLLTEMIFNGAFNELAIEQAVALLSCFVFEE 871

Query: 829 KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
           K+     L+ ELA PL+Q+Q++AR+IAE+  + KL V+ +EYV S  R  +MDV++ WSK
Sbjct: 872 KTESSGALKEELAAPLRQMQDAARRIAEVSQDSKLVVDKEEYVNS-FRSEMMDVVHAWSK 930

Query: 889 GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           GA F ++  MT ++EGSIIR  RRL+E L Q+  AA+++G   LE KFAA    ++R I+
Sbjct: 931 GAKFIQICNMTRVYEGSIIRCMRRLEELLRQMCQAAKSIGNTELENKFAAGITLIKRDIV 990

Query: 949 FSNSLYL 955
           F+ SLYL
Sbjct: 991 FAASLYL 997


>gi|17864608|ref|NP_524929.1| lethal (2) 35Df [Drosophila melanogaster]
 gi|5052566|gb|AAD38613.1|AF145638_1 l.2.35Df [Drosophila melanogaster]
 gi|7298249|gb|AAF53481.1| lethal (2) 35Df [Drosophila melanogaster]
 gi|220943740|gb|ACL84413.1| l(2)35Df-PA [synthetic construct]
          Length = 1055

 Score =  971 bits (2511), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/953 (50%), Positives = 657/953 (68%), Gaps = 50/953 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNES 93
            +SC HEVA     A    E I      P+  ++G  AK Y F LDPFQR ++ C++ ++S
Sbjct: 120  KSCTHEVA-----AHPDQEYI------PLKPFSGVPAKEYPFVLDPFQRQAILCIDNSQS 168

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EFKDVGL+TGDV
Sbjct: 169  VLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDV 228

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+ASCL+MTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ERGVVWEE++I LP  
Sbjct: 229  TINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDN 288

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK 
Sbjct: 289  VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKG 348

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK-GGSGSGGSDIFKIVKMIMERKFQPV 332
            QF+EDNF             G+   G   GR     G+ +G ++IFKIVKMIMER F PV
Sbjct: 349  QFKEDNFTTAMAVLANAGEAGK---GDQKGRHGGIKGTNAGQTNIFKIVKMIMERNFAPV 405

Query: 333  IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
            I+FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L EEDR LP +E +LPLL+
Sbjct: 406  IIFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLR 465

Query: 393  RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
            RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   
Sbjct: 466  RGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKF 525

Query: 453  RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
            R+I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +D+V GK  P+ S F L+Y  
Sbjct: 526  RWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNM 585

Query: 513  ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYH 572
            +LNL+ R E +   E++++ SF+QFQ + ALP +  +V +   E   L    E  +A YH
Sbjct: 586  VLNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYH 643

Query: 573  KLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK------- 625
             ++  + Q  K+    IT+P+ +L +L  GRL+KV  G  ++ WG+V+N  K+       
Sbjct: 644  HIRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNP 703

Query: 626  ----PSAGVGTL-----------------PS-RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                PS  +  L                 P+ RG   +VPV   LI+ +S IR+  P DL
Sbjct: 704  LKAEPSVTIDVLLHVSEAAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDL 763

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            R  D R+++L  +QE + RFP G P LNP+ DM I+D E  D+VN I + E +L  HPL+
Sbjct: 764  RSADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDREFRDIVNTISQFEKRLEEHPLH 823

Query: 724  KSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            KS +  +I R +Q K  +  ++Q LK++++ ++     DELK+R RVL+++G+     V+
Sbjct: 824  KSPELERIHRRYQDKVTLQKQLQDLKAELKAARSLLQMDELKHRKRVLRRMGYCKPGDVI 883

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            + KGR AC + + DELL+TE++FNG FNDL   Q  AL SCF+  +KSSE +    EL+ 
Sbjct: 884  EFKGRVACELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSG 943

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+ +Q+ AR+IA++  ECKL+++ D YV+   +PFLMDV+  W KG++F  V +MTDIF
Sbjct: 944  PLRSMQDLARRIAKVSTECKLDLDADTYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIF 1002

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1003 EGSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1055


>gi|380026691|ref|XP_003697078.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 1 [Apis
            florea]
          Length = 1022

 Score =  971 bits (2510), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/949 (51%), Positives = 657/949 (69%), Gaps = 48/949 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVAVP  Y     E+            + AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 92   SCTHEVAVPPDYEYVPLES---------KQSKPAKEYKFVLDPFQKEAILCIENNQSVLV 142

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE  +EFKDVGL+TGDVT++
Sbjct: 143  SAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFFEEFKDVGLVTGDVTIN 202

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 203  PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 262

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QF EW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 263  VFLSATIPNARQFVEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEMGQFK 322

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF +     L+     +   G + GR  KGG   S +G ++IFK+VKMIMER F PVI
Sbjct: 323  EENFNRAM-ACLQHSDAAK---GDSKGR--KGGIRPSNAGQTNIFKMVKMIMERNFAPVI 376

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLD NT EEK  V++VF NA+D LNEEDR LP +E +LPLL+R
Sbjct: 377  IFSFSKKDCEIYAMQMAKLDLNTLEEKKLVDEVFNNAMDVLNEEDRRLPQVENVLPLLRR 436

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 437  GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTASRKFDGKDFR 496

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 497  WITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMV 556

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ++PD+  KV  L+    ++       ++ YH 
Sbjct: 557  LNLL-RVE-EINPEYMLERSFYQFQNQASIPDLYNKVKDLQGAYNAVTIDRYNHISSYHD 614

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
            ++  +  L  +    +T+PE +L +L  GRL+KV+     + WG++VN            
Sbjct: 615  IREQLEHLSSEFRCFLTKPEYLLPFLQPGRLVKVKNENEMFDWGIIVNFKKKNPKNPIRE 674

Query: 623  -----------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                       + K S+    +P R    G   +VPV   LIS +S +RL  P DLRP D
Sbjct: 675  NTVIIIDILLHISKNSSEGCPVPCREGEEGDMEVVPVIHTLISQISSLRLYYPKDLRPSD 734

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             R+S+L  +QE++ RFP G P LNP+ DM IED    D+V +IE LE KL+AH L+K  +
Sbjct: 735  NRKSVLKTIQEVKKRFPDGPPLLNPITDMHIEDDAFKDIVKKIEVLEEKLYAHSLHKDPN 794

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             N +   F  K ++ ++++Q K +++ ++     DELK R RVL+++ +  A  V++LKG
Sbjct: 795  VNILYEQFLHKEDLGNQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIELKG 854

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKS+E      EL+ PL+Q
Sbjct: 855  RVACELNGADELLMTEMIFNGLFNSLSVPQMVALISCFVCDDKSNEMPKSTEELSGPLRQ 914

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W KGATF ++ +MTDIFEGSI
Sbjct: 915  MQDLARRIAKVSTEANLELDEDTYVER-FKPYLMDVVYAWCKGATFLQICKMTDIFEGSI 973

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IR  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 974  IRCMRRLEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1022


>gi|156553729|ref|XP_001600961.1| PREDICTED: superkiller viralicidic activity 2-like 2-like isoform 1
            [Nasonia vitripennis]
 gi|345497584|ref|XP_003428027.1| PREDICTED: superkiller viralicidic activity 2-like 2-like isoform 2
            [Nasonia vitripennis]
          Length = 1001

 Score =  968 bits (2503), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/953 (51%), Positives = 654/953 (68%), Gaps = 57/953 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--AKTYSFELDPFQRVSVACLERNESV 94
            SC HEVAVP                 P+ N     AK Y F LDPFQ+ ++ C+E N+SV
Sbjct: 72   SCTHEVAVPPDQEYV-----------PLENATTKPAKEYKFVLDPFQKEAILCIENNQSV 120

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE ++EFKDVGL+TGDVT
Sbjct: 121  LVSAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFYEEFKDVGLVTGDVT 180

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +
Sbjct: 181  INPTASILIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNV 240

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA QFAEW+ HLH QPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  Q
Sbjct: 241  HYVFLSATIPNARQFAEWVAHLHHQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEHGQ 300

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQP 331
            F+EDNF +         + G    G   GR  KGG   + +G ++IFK+VKMIMER F P
Sbjct: 301  FKEDNFNRAMAC-----LQGDAAKGDTKGR--KGGMHKTNAGQTNIFKVVKMIMERNFAP 353

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VI+FSFS+++CE +AM ++KLD NT EEK  V++VF NA+D LNE+DR LP +E +LPLL
Sbjct: 354  VIIFSFSKKDCEVYAMQLAKLDLNTAEEKKLVDEVFNNAMDVLNEDDRKLPQVENVLPLL 413

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG  
Sbjct: 414  RRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKD 473

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQMSGRAGRRG DD+GI I+M+DEQ+  +  K++V GK  P+ S F L+Y 
Sbjct: 474  FRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPSVGKEIVQGKADPINSAFHLTYN 533

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +LNL+ R E +   E++++ SF+QFQ + A+P++  +V  L+ E   +       ++ Y
Sbjct: 534  MVLNLL-RVE-EINPEYMLERSFYQFQNQAAIPELYNQVKTLQNEYDEIQFDKYTLMSAY 591

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV--------- 622
            H ++  + +L     + +T+PE +L +L  GR+IKV+     + WG++VN          
Sbjct: 592  HDIREQLDRLSLDFRAFLTKPEYLLPFLQPGRMIKVKNEKESFDWGIIVNFKKKNPKNPE 651

Query: 623  -------------VKKPSAGVGTLPSRGGGYIVPVQL----PLISTLSKIRLSVPPDLRP 665
                         V K S      P   G       +     LIS +S +RL  P DLRP
Sbjct: 652  KEKTSIIVDILLHVAKDSTEAAPKPCPEGEEGEVEVVPVLHTLISQISSLRLYYPKDLRP 711

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
             D R+S+L  +QE++ RFP G P LNP+ DMKIEDP   D++N+IE LE +L+AHPL+K 
Sbjct: 712  ADNRKSVLKTIQEVKKRFPDGPPLLNPITDMKIEDPGFKDIINRIEVLEERLYAHPLHK- 770

Query: 726  QDENQIRCFQR---KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
             D N    +Q+   K E+  ++   K++++ ++     DELK R RVL++L +  A  V+
Sbjct: 771  -DPNLTDLYQKFLIKEEIGKKLINAKTELKRAKSVLQMDELKCRKRVLRRLAYCTAADVI 829

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            +LKGR AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKSSE      EL+ 
Sbjct: 830  ELKGRVACELNGADELLMTEMIFNGLFNALTVPQMTALISCFVCDDKSSETPKSIDELSG 889

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+Q+ AR+IA++  E  LE++ D YVE   +PFLMDV+Y W KGATF ++ +MTDIF
Sbjct: 890  PLRQMQDIARRIAKVSTEANLELDEDSYVEK-FKPFLMDVVYAWCKGATFLQICKMTDIF 948

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 949  EGSIIRCMRRLEEVLRQLLQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1001


>gi|224587915|gb|ACN58736.1| Superkiller viralicidic activity 2-like 2 [Salmo salar]
          Length = 906

 Score =  968 bits (2502), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/913 (52%), Positives = 646/913 (70%), Gaps = 44/913 (4%)

Query: 80  FQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL 139
           FQR ++ C++ N+SVLVSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+
Sbjct: 1   FQREAILCIDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREM 60

Query: 140 HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRER 199
           ++EF+DVGLMTGDVT++P ASCL+MTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ER
Sbjct: 61  YEEFQDVGLMTGDVTINPTASCLIMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDAER 120

Query: 200 GVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFP 259
           GVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHVVYTDFRPTPLQHY+FP
Sbjct: 121 GVVWEETIILLPDNVHYVFLSATIPNAKQFAEWICHLHKQPCHVVYTDFRPTPLQHYIFP 180

Query: 260 VGGSGLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGS 315
            GG GL+LVVDE  +FREDNF      L+DT      GG     K   +  KGG+  G S
Sbjct: 181 AGGDGLHLVVDENGEFREDNFNTAMQVLRDT---GDSGGSSGGSKWDPKGRKGGT-RGPS 236

Query: 316 DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
           ++FKIVKMIMER FQPVI+FSFS++ECE +A+ +SKLDFNT EEK  VE+VF NA+DCL+
Sbjct: 237 NVFKIVKMIMERNFQPVIIFSFSKKECEAYALQVSKLDFNTDEEKKLVEEVFNNAIDCLS 296

Query: 376 EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
           ++D+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMP
Sbjct: 297 DDDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLLKALFATETFAMGINMP 356

Query: 436 AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
           A+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG D+RGI I M DE+M     K ++
Sbjct: 357 ARTVLFTNARKFDGKDFRWITSGEYIQMSGRAGRRGMDERGIVIFMADEKMSPAVGKQLL 416

Query: 496 LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
            G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P + + ++KLEE
Sbjct: 417 KGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAVPGVVENMAKLEE 474

Query: 556 EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
              +++   E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+KV+    D+G
Sbjct: 475 MYNAIEIPNEESVVTYYKIRQQLAKLSKEIEEFIHKPKYCLPFLQPGRLVKVKNEDADFG 534

Query: 616 WGVVVNVVKKPSAGVGT--------------------------------LPSRGGGYIVP 643
           WGVVVN  KK +    T                                   +G   +VP
Sbjct: 535 WGVVVNFSKKSNVKAITGDADPLYVVEVLVHCSKESVKNTATEAAKPAAAGEKGEMQVVP 594

Query: 644 VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
           V L L++++S +RL  P DLRP D RQS+L ++QE++ RFP G+P L+P+ DM I+DP +
Sbjct: 595 VMLHLLTSISSVRLYSPKDLRPYDNRQSMLKSIQEVQKRFPDGVPLLDPIDDMGIKDPGL 654

Query: 704 VDLVNQIEELEHKLFAHPLNKSQDENQIRCF-QRKAEVNHEIQQLKSKMRDSQIQKFRDE 762
             ++ ++E  EH++++HP++       +    +RKA +  +I+  K +++ ++     DE
Sbjct: 655 KKVIQKVEAFEHRMYSHPMHSDPSLEAVYSLCERKALIAGDIKGAKRELKKARTVLQMDE 714

Query: 763 LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
           LK R RVL++LG   +  V+++KGR AC I + DELL+TE++FNG FNDL   QV AL S
Sbjct: 715 LKCRKRVLRRLGFASSSDVIEMKGRVACEISSADELLLTEMVFNGLFNDLSAEQVTALLS 774

Query: 823 CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  +  +E   L  +LA PL+Q+QE A+++A++  E KLEV+ D Y++   +P LMDV
Sbjct: 775 VFVFQENVNEMPKLTEQLAGPLRQMQECAKRVAKVSAEAKLEVDEDTYLDK-FKPHLMDV 833

Query: 883 IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
           +Y W+ G+TFA++ +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     
Sbjct: 834 VYTWANGSTFAQICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITK 893

Query: 943 LRRGIMFSNSLYL 955
           ++R I+F+ SLYL
Sbjct: 894 IKRDIVFAASLYL 906


>gi|195475478|ref|XP_002090011.1| GE21122 [Drosophila yakuba]
 gi|194176112|gb|EDW89723.1| GE21122 [Drosophila yakuba]
          Length = 1047

 Score =  967 bits (2500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/952 (50%), Positives = 660/952 (69%), Gaps = 48/952 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNES 93
            +SC HEVA     A    E I      P+  ++G  AK Y F LDPFQR ++ C++ ++S
Sbjct: 112  KSCTHEVA-----AHPDQEYI------PLQPFSGVPAKEYPFVLDPFQRQAILCIDNSQS 160

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EFKDVGL+TGDV
Sbjct: 161  VLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDV 220

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  
Sbjct: 221  TINPSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDN 280

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK 
Sbjct: 281  VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKG 340

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            QF+EDNF             G+ +    +G +   G+ +G ++IFKIVKMIMER F PVI
Sbjct: 341  QFKEDNFTTAMAVLANAGEAGKGDQKGRNGGIK--GTNAGQTNIFKIVKMIMERNFAPVI 398

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L+EEDR LP +E +LPLL+R
Sbjct: 399  IFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLSEEDRRLPQVENVLPLLRR 458

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 459  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 518

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +D+V GK  P+ S F L+Y  +
Sbjct: 519  WISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMV 578

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ALP +  +V +   E   L    E  +A YH 
Sbjct: 579  LNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVEEKTMELNKLTIKDEHNIASYHH 636

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-------- 625
            ++  + Q  K+    IT+P+ +L +L  GRL+KV  G  ++ WG+V+N  K+        
Sbjct: 637  IRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPL 696

Query: 626  ---PSAGVGTL-----------------PS-RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
               PS  +  L                 P+ RG   +VPV   LI+ +S IR+  P DLR
Sbjct: 697  KCEPSVTIDVLLHVSEAAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLR 756

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              D R+++L  +QE + RFP+G P LNP+ DM I++ E  D+VN I + E +L  HPL+K
Sbjct: 757  SADNRRAVLKTIQEAKKRFPKGPPVLNPIDDMNIKEREFRDIVNTIAQFETRLEEHPLHK 816

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            S +  +I R +Q K  +  ++Q LK++++ ++     +ELK+R RVL+++G+     V++
Sbjct: 817  SPELERIHRRYQDKVALQSQLQDLKAELKAARSLLQMEELKHRKRVLRRMGYCKPGDVIE 876

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC + + DELL+TE++FNG FNDL   Q  AL SCF+  +KSSE +    EL+ P
Sbjct: 877  FKGRVACELSSADELLMTEMIFNGIFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGP 936

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +Q+ AR+IA++  ECKL+++ D YV+   +PFLMDV+  W KG++F  V +MTDIFE
Sbjct: 937  LRSMQDLARRIAKVSTECKLDLDADTYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIFE 995

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L Q+  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 996  GSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1047


>gi|195579445|ref|XP_002079572.1| GD24019 [Drosophila simulans]
 gi|194191581|gb|EDX05157.1| GD24019 [Drosophila simulans]
          Length = 1051

 Score =  967 bits (2500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/952 (50%), Positives = 660/952 (69%), Gaps = 48/952 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNES 93
            +SC HEVA     A    E I      P+  ++G  AK Y F LDPFQR ++ C++ ++S
Sbjct: 116  KSCTHEVA-----AHPDQEYI------PLKPFSGVPAKEYPFVLDPFQRQAILCIDNSQS 164

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE  +EFKDVGL+TGDV
Sbjct: 165  VLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTEEFKDVGLVTGDV 224

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+ASCL+MTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ERGVVWEE++I LP  
Sbjct: 225  TINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDN 284

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK 
Sbjct: 285  VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKG 344

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            QF+EDNF             G+ +    +G +   G+ +G ++IFKIVKMIMER F PVI
Sbjct: 345  QFKEDNFTTAMAVLANAGEAGKGDQKGRNGGIK--GTNAGQTNIFKIVKMIMERNFAPVI 402

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L EEDR LP +E +LPLL+R
Sbjct: 403  IFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRR 462

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG + R
Sbjct: 463  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKNFR 522

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +D+V GK  P+ S F L+Y  +
Sbjct: 523  WISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMV 582

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ALP +  +V +   E   L    E  +A YH 
Sbjct: 583  LNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHH 640

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-------- 625
            ++  + Q  K+    IT+P+ +L +L  GRL+KV  G  ++ WG+V+N  K+        
Sbjct: 641  IRSQLDQHGKEFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPL 700

Query: 626  ---PSAGVGTL-----------------PS-RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
               PS  +  L                 P+ RG   +VPV   LI+ +S IR+  P DLR
Sbjct: 701  KAEPSVTIDVLLHVSEAAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLR 760

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              D R+++L  +QE + RFP G P LNP+ DM I+D +  D+VN I + E +L  HPL+K
Sbjct: 761  SADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDRDFRDIVNTIAQFEKRLEEHPLHK 820

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            S +  +I R +Q K  +  ++Q LK++++ ++     +ELK+R RVL+++G+     V++
Sbjct: 821  SPELERIHRRYQDKLTLQKQLQDLKAELKAARSLLQMEELKHRKRVLRRMGYCKPGDVIE 880

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC + + DELL+TE++FNG FNDL   Q  AL SCF+  +KSSE +    EL+ P
Sbjct: 881  FKGRVACELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGP 940

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +Q+ AR+IA++  ECKL+++ D YV+   +PFLMDV+  W KG++F  V +MTDIFE
Sbjct: 941  LRSMQDLARRIAKVSTECKLDLDADTYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIFE 999

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L Q+  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1000 GSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1051


>gi|195338646|ref|XP_002035935.1| GM16128 [Drosophila sechellia]
 gi|194129815|gb|EDW51858.1| GM16128 [Drosophila sechellia]
          Length = 1051

 Score =  967 bits (2500), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/952 (50%), Positives = 659/952 (69%), Gaps = 48/952 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNES 93
            +SC HEVA     A    E I      P+  ++G  AK Y F LDPFQR ++ C++  +S
Sbjct: 116  KSCTHEVA-----AHPDQEYI------PLKPFSGVPAKEYPFVLDPFQRQAILCIDNRQS 164

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE  +EFKDVGL+TGDV
Sbjct: 165  VLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTEEFKDVGLVTGDV 224

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+ASCL+MTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ERGVVWEE++I LP  
Sbjct: 225  TINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDN 284

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK 
Sbjct: 285  VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKG 344

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            QF+EDNF             G+ +    +G +   G+ +G ++IFKIVKMIMER F PVI
Sbjct: 345  QFKEDNFTTAMAVLANAGEAGKGDQKGRNGGIK--GTNAGQTNIFKIVKMIMERNFAPVI 402

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L EEDR LP +E +LPLL+R
Sbjct: 403  IFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRR 462

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG + R
Sbjct: 463  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKNFR 522

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +D+V GK  P+ S F L+Y  +
Sbjct: 523  WISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMV 582

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ALP +  +V +   E   L    E  +A YH 
Sbjct: 583  LNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHH 640

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-------- 625
            ++  + Q  K+    IT+P+ +L +L  GRL+KV  G  ++ WG+V+N  K+        
Sbjct: 641  IRSQLDQHGKEFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPL 700

Query: 626  ---PSAGVGTL-----------------PS-RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
               PS  +  L                 P+ RG   +VPV   LI+ +S IR+  P DLR
Sbjct: 701  KAEPSVTIDVLLHVSEAAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLR 760

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              D R+++L  +QE + RFP G P LNP+ DM I+D +  D+VN I + E +L  HPL+K
Sbjct: 761  SADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDRDFRDIVNTIAQFEKRLEEHPLHK 820

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            S +  +I R +Q K  +  ++Q LK++++ ++     +ELK+R RVL+++G+     V++
Sbjct: 821  SPELERIHRRYQDKLTLQKQLQDLKAELKAARSLLQMEELKHRKRVLRRMGYCKPGDVIE 880

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC + + DELL+TE++FNG FNDL   Q  AL SCF+  +KSSE +    EL+ P
Sbjct: 881  FKGRVACELSSADELLMTEMIFNGVFNDLTAPQAVALLSCFVCDEKSSESVKSATELSGP 940

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +Q+ AR+IA++  ECKL+++ D YV+   +PFLMDV+  W KG++F  V +MTDIFE
Sbjct: 941  LRSMQDLARRIAKVSTECKLDLDADTYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIFE 999

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L Q+  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1000 GSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1051


>gi|340708607|ref|XP_003392914.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Bombus
            terrestris]
          Length = 1079

 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/949 (51%), Positives = 651/949 (68%), Gaps = 48/949 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVAVP  Y     E            G+ AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 149  SCTHEVAVPPDYEYVSLEN---------KQGKPAKEYKFVLDPFQKEAILCIENNQSVLV 199

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE  +EF+D GL+TGDVT++
Sbjct: 200  SAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFFEEFEDAGLVTGDVTIN 259

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ RGVVWEE++I LP  +  
Sbjct: 260  PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKNRGVVWEETLILLPDNVHY 319

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QF EW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 320  VFLSATIPNARQFVEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDETGQFK 379

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF +           G    G   GR  KGG   S +G ++IFK+VKMIMER F PVI
Sbjct: 380  EENFNRAMACLHH----GDAAKGDTKGR--KGGIRPSNAGQTNIFKMVKMIMERNFAPVI 433

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM ++KLD NT EEK  V++VF NA+D LNEEDR LP +E +LPLL+R
Sbjct: 434  IFSFSKKDCEIYAMQLAKLDLNTLEEKKLVDEVFNNAMDVLNEEDRRLPQVENVLPLLRR 493

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FT+ +K+DG   R
Sbjct: 494  GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTSSRKFDGKDFR 553

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 554  WITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMV 613

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ++PD+  K   L+    ++       ++ YH 
Sbjct: 614  LNLL-RVE-EINPEYMLERSFYQFQNQASIPDLYNKAKDLQIAYNAVTIDRYNHISSYHD 671

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
            ++  +  L  +  S +T+P  +L +L  GRL+KV+     + WG++VN            
Sbjct: 672  IREQLDHLSTEFRSFLTKPVYLLPFLQPGRLVKVKNENEMFDWGIIVNFKKKSPKNPMKE 731

Query: 623  -----------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                       V K S     +P      G   +VPV   LIS +S +RL  P DLRP D
Sbjct: 732  STAIIIDILLHVSKDSKEGCPVPCHEGEEGDVEVVPVIHTLISQISSLRLYYPKDLRPSD 791

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             R+S+L  +QE++ RFP G P LNP+ DM IED    D+V +IE LE KL+AHPL+K  D
Sbjct: 792  NRKSVLKTIQEVKKRFPDGPPLLNPITDMHIEDEAFKDIVKKIEVLEEKLYAHPLHKDPD 851

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             N +   F  K +++++++Q K +++ ++     DELK R RVL+++ +  A  V++LKG
Sbjct: 852  VNTLYEQFLHKEDLSNQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIELKG 911

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKS+E +    EL+ PL+Q
Sbjct: 912  RVACELNGADELLMTEMIFNGLFNSLSVPQMVALISCFVCDDKSNEMLKCTEELSGPLRQ 971

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +Q+ AR+IA++  E  LE++ + YVE   +P+LMDV+Y W KGATF ++ +MTDIFEGSI
Sbjct: 972  MQDLARRIAKVSTEANLELDENAYVEQ-FKPYLMDVVYAWCKGATFLQICKMTDIFEGSI 1030

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IR  RR +E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 1031 IRCMRRSEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1079


>gi|350413173|ref|XP_003489905.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Bombus
            impatiens]
          Length = 1034

 Score =  967 bits (2499), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/949 (51%), Positives = 649/949 (68%), Gaps = 48/949 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVAVP  Y     E            G+ AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 104  SCTHEVAVPPDYEYVSLEN---------KQGKPAKEYKFVLDPFQKEAILCIENNQSVLV 154

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE  +EF+D GL+TGDVT++
Sbjct: 155  SAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFFEEFEDAGLVTGDVTIN 214

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 215  PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 274

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QF EW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 275  VFLSATIPNARQFVEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDETGQFK 334

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF +           G    G   GR  KGG   S +G ++IFK+VKMIMER F PVI
Sbjct: 335  EENFNRAMACLHH----GDAAKGDTKGR--KGGIRPSNAGQTNIFKMVKMIMERNFAPVI 388

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM ++KLD NT EEK  V++VF NA+D LNEEDR LP +E +LPLL+R
Sbjct: 389  IFSFSKKDCEIYAMQLAKLDLNTLEEKKLVDEVFNNAMDVLNEEDRRLPQVENVLPLLRR 448

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FT+ +K+DG   R
Sbjct: 449  GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTSSRKFDGKDFR 508

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 509  WITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMV 568

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ++PD+  K   L+    ++       ++ YH 
Sbjct: 569  LNLL-RVE-EINPEYMLERSFYQFQNQASIPDLYNKAKDLQIAYNAVTIDRYNHISSYHD 626

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
            ++  +  L  +  S +T+PE +L +L  GRL+KV+     + WG++VN            
Sbjct: 627  IREQLDHLSTEFRSFLTKPEYLLPFLQPGRLVKVKNENEMFDWGIIVNFKKKNPKNPMKE 686

Query: 623  -----------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                       V K S     +P      G   +VPV   LIS +S +RL  P DLRP D
Sbjct: 687  STAIIIDILLHVSKDSKEGCPIPCHEGEEGDVEVVPVIHTLISQISSLRLYYPRDLRPYD 746

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             R+ +L  +QE++ RFP G P LNP+ DM IED    D+V +IE LE KL+AHPL+K  D
Sbjct: 747  NRKGVLKTIQEVKKRFPDGPPLLNPITDMHIEDEAFKDIVKKIEVLEEKLYAHPLHKDPD 806

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             N +   F  K +++ +++Q K +++ ++     DELK R RVL+++ +  A  V++LKG
Sbjct: 807  VNTLYEQFLHKEDLSSQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIELKG 866

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKS+E      EL  PL+Q
Sbjct: 867  RVACELNGADELLMTEMIFNGLFNSLSVPQMVALISCFVCDDKSNEMPKCTEELGGPLRQ 926

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W KGATF ++ +MTDIFEGSI
Sbjct: 927  MQDLARRIAKVSTEANLELDEDAYVER-FKPYLMDVVYAWCKGATFLQICKMTDIFEGSI 985

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IR  RR +E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 986  IRCMRRSEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1034


>gi|194857599|ref|XP_001968990.1| GG25171 [Drosophila erecta]
 gi|190660857|gb|EDV58049.1| GG25171 [Drosophila erecta]
          Length = 1051

 Score =  966 bits (2497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/952 (50%), Positives = 659/952 (69%), Gaps = 48/952 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNES 93
            +SC HEVA     A    E I      P+  ++G  AK Y F LDPFQR ++ C++ ++S
Sbjct: 116  KSCTHEVA-----AHPDQEYI------PLQPFSGVPAKEYPFVLDPFQRQAILCIDNSQS 164

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EFKDVGL+TGDV
Sbjct: 165  VLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDV 224

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  
Sbjct: 225  TINPSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDN 284

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK 
Sbjct: 285  VRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKG 344

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            QF+EDNF             G+ +    +G +   G+ +G ++IFKIVKMIMER F PVI
Sbjct: 345  QFKEDNFTTAMAVLANAGEAGKGDQKGRNGGIK--GTNAGQTNIFKIVKMIMERNFAPVI 402

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L EEDR LP +E +LPLL+R
Sbjct: 403  IFSFSKKDCEIYAMQMAKLDFNTPDEKKLVDEVFNNAMDVLTEEDRRLPQVENVLPLLRR 462

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 463  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 522

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +D+V GK  P+ S F L+Y  +
Sbjct: 523  WISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMV 582

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ALP +  +V +   E   L    E  +A YH 
Sbjct: 583  LNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVEQKTLELNKLTIKDEHNIASYHH 640

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-------- 625
            ++  + Q  K+    IT+P+ +L +L  GRL+KV  G  ++ WG+V+N  K+        
Sbjct: 641  IRSQLDQHGKQFRQWITKPQYLLPFLQPGRLVKVAAGSQEYDWGIVLNFKKQDQSRKNPL 700

Query: 626  ---PSAGVGTL-----------------PS-RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
               PS  +  L                 P+ RG   +VPV   LI+ +S IR+  P DLR
Sbjct: 701  KCEPSVTIDVLLHVSEAAAKTGDTEPCKPNERGCMEVVPVAHTLITQISSIRVYFPNDLR 760

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              D R+++L  +QE + RFP G P LNP+ DM I++ E  D+VN I + E +L  HPL+K
Sbjct: 761  SADNRRAVLKTIQEAKKRFPMGPPVLNPIDDMNIKEREFRDIVNTIAQFEARLEEHPLHK 820

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            S +  +I R +Q K ++  ++Q LK++++ ++     +ELK+R RVL+++G+     V++
Sbjct: 821  SPELERIYRRYQDKVKLQSQLQDLKAELKAARSLLQMEELKHRKRVLRRMGYCKPGDVIE 880

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC + + DELL+TE++FNG FN+L   Q  AL SCF+  +KSSE +    EL+ P
Sbjct: 881  FKGRVACELSSADELLMTEMIFNGVFNELTAPQAVALLSCFVCDEKSSESVKSATELSGP 940

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +Q+ AR+IA++  ECKL+++ D YV+   +PFLMDV+  W KG++F  V +MTDIFE
Sbjct: 941  LRSMQDLARRIAKVSTECKLDLDADTYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIFE 999

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L Q+  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1000 GSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1051


>gi|427785387|gb|JAA58145.1| Putative cytoplasmic exosomal rna helicase ski2 dead-box superfamily
            [Rhipicephalus pulchellus]
          Length = 1031

 Score =  965 bits (2495), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/955 (50%), Positives = 664/955 (69%), Gaps = 54/955 (5%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            CVHEVA+P G  Y   K              G  A+ Y F LDPFQ+ ++ CLE N+SVL
Sbjct: 94   CVHEVAMPEGMEYVPLKRNR----------EGPAAREYPFILDPFQQEAILCLEHNQSVL 143

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT VAEYAI++AF++KQRVIYT+P+KALSNQK+RE   +F DVGLMTGDVT+
Sbjct: 144  VSAHTSAGKTVVAEYAISLAFQEKQRVIYTTPIKALSNQKFREFTDDFTDVGLMTGDVTI 203

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  ++
Sbjct: 204  NPSASCLIMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDNVR 263

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHVVYT++RP PLQHY+FP GGSGLYLVVDE   F
Sbjct: 264  YVFLSATIPNAKQFAEWICHLHKQPCHVVYTEYRPVPLQHYIFPAGGSGLYLVVDESGNF 323

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            +ED F    +     +  G    G ++ +  KGG   G S+ +KIVKMIMER + PVIVF
Sbjct: 324  KEDKF---NEAMALLQNAGDAAKGDSALKGRKGGF-KGESNCYKIVKMIMERDYAPVIVF 379

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS++ECE +A  +++LD  T +EK  V +VFQNA+D L+EED+ LP +E +LPLLKRGI
Sbjct: 380  SFSKKECEAYATQIARLDLTTFKEKKLVMEVFQNAMDSLSEEDQKLPQVEQVLPLLKRGI 439

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            AVHHSGLLP++KE +E+LF EGLVKALFATETFAMGLNMPA+TV+FT  +K+DG   R++
Sbjct: 440  AVHHSGLLPILKETIEILFAEGLVKALFATETFAMGLNMPARTVLFTNARKFDGKDFRWV 499

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     KD+V G P P+ S F L+Y  +LN
Sbjct: 500  TSGEYIQMSGRAGRRGLDDRGIVILMVDEKMSPAAGKDIVKGLPDPINSAFHLTYNMVLN 559

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            LM R E +   E++++ SF QFQ   ++P   +K+ KL+ E  S     E EVA Y+K++
Sbjct: 560  LM-RVE-EVNPEYILERSFFQFQNNASIPVHYQKLQKLQAELDSFKIPNEPEVAAYYKVR 617

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK---------- 625
              +A L ++L + +T+P+  + YL  GR++ +  G  D+GWGVVV   KK          
Sbjct: 618  QQLASLSRELQAFLTKPQYCVPYLQPGRMVHINTGTDDFGWGVVVAYSKKKVVTARGQSG 677

Query: 626  ---PSAGVGTLPS---------------------RGGGYIVPVQLPLISTLSKIRLSVPP 661
               P   V  L +                     +G   +VP+ +  I+ +S IRL    
Sbjct: 678  LKDPVVIVDVLLNVSKESAQTKLTSKLTPPKPGEKGEVQVVPLTIDNITKMSSIRLFYNQ 737

Query: 662  DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
            DL+  D R ++L +++E+E RFP+G+P ++P +D+ I+D  + ++V +IE  E++++AHP
Sbjct: 738  DLKSSDNRAAVLKSIKEVEERFPKGVPLVDPFEDLNIKDANMKEVVKKIEAFENRMYAHP 797

Query: 722  LNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
            ++   +  +I   +++K +V  EI+++K++++ ++     +ELK R RVL++LG+  A  
Sbjct: 798  MHSHPELPKIYAEYEKKMKVVQEIREVKNELKKAKALLQMEELKCRKRVLRRLGYATASD 857

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
            V+++KG+ AC + + DELLVTE++FN  FN+L+ HQ  AL SC +  +KS+E  NL  EL
Sbjct: 858  VMEIKGKVACEVSSADELLVTEMIFNNMFNELNAHQATALLSCLVFQEKSNEMPNLTEEL 917

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
            + PL+Q+Q+ AR+IA +  + KL ++ D YV S+ +P LMDVIY WSKGA+FA V +MTD
Sbjct: 918  SGPLRQMQDIARRIARVTKDAKLCIDEDTYV-SSFKPHLMDVIYAWSKGASFAHVCRMTD 976

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +FEGSIIR  RRL+E L Q+  AA+ +G   LE KF+ A + ++R I+F+ SLYL
Sbjct: 977  VFEGSIIRCMRRLEELLRQIVQAAKCIGNTELENKFSEAIKLMKRDIVFAASLYL 1031


>gi|443713660|gb|ELU06394.1| hypothetical protein CAPTEDRAFT_155216 [Capitella teleta]
          Length = 925

 Score =  964 bits (2491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/953 (50%), Positives = 661/953 (69%), Gaps = 75/953 (7%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C HEV++P G      + +      P      AK Y F LDPFQ+ ++ CLE N+SVLV
Sbjct: 14  ACTHEVSLPPGAEF---KPMQPAPDKP------AKEYPFILDPFQKEALLCLENNQSVLV 64

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT VAEYAIAM+   KQRVIYT+P+KALSNQKYREL +EF DVGLMTGDVT++
Sbjct: 65  SAHTSAGKTVVAEYAIAMSLAAKQRVIYTTPIKALSNQKYRELEEEFTDVGLMTGDVTIN 124

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P+ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+++ERGVVWEESII LP  +  
Sbjct: 125 PSASCLVMTTEILRSMLYRGSELMREVAWVIFDEIHYMRNKERGVVWEESIILLPDNVHY 184

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA QFAEWIC LHKQPCHVVYT++RPTPLQHY+FP GG G++LVV+EK +FR
Sbjct: 185 VFLSATIPNAKQFAEWICFLHKQPCHVVYTEYRPTPLQHYIFPSGGDGIHLVVNEKGEFR 244

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
           EDNF                             + +  S+ FKIVKMIMER   PVIVFS
Sbjct: 245 EDNF-----------------------------TTAMSSNCFKIVKMIMERNLAPVIVFS 275

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FS+++CE +AM MS+LDFNT EEK  VE+VF NA+D L++ED+ LP +E +LPLLK+GI 
Sbjct: 276 FSKKDCEAYAMQMSRLDFNTAEEKKLVEEVFNNAIDTLSDEDKKLPQVEHVLPLLKKGIG 335

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
           +HH GLLP++KE +E+LF EGL+K LFATETFAMGLNMPA+TV+FT  +K+DG   R++ 
Sbjct: 336 IHHGGLLPLLKETIEILFGEGLIKTLFATETFAMGLNMPARTVLFTNARKFDGKEFRWVS 395

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
           SGEYIQMSGRAGRRG DD+GI I+MVDE+M     K+++ G P  L S F L+Y  +LNL
Sbjct: 396 SGEYIQMSGRAGRRGLDDKGIVILMVDEKMSPAVGKNILKGLPDALNSAFHLTYNMVLNL 455

Query: 517 MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
           + R E +   E++++ SF+QFQ   A+P++ + + KLE E ++L    E  VA Y+K++ 
Sbjct: 456 L-RVE-EINPEYMLERSFYQFQNYAAIPELIENLKKLETEYSALSIPEEDSVASYYKIRQ 513

Query: 577 DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP---------- 626
            +  L K+L + IT+P+ VL +L  GRL+KV  G   + WGVVVN  KK           
Sbjct: 514 QLDNLGKELHAYITKPQYVLPFLQPGRLVKVVNGPDAFDWGVVVNFQKKSNQSETPGDKA 573

Query: 627 ---------------------SAGVGTLPS--RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                                ++ V   PS  +G   +VPV L LI+ +S +RL +P D+
Sbjct: 574 DPMFVVEVLMHLTKESAKQSRTSAVKPCPSGEKGEMQVVPVMLHLITHISAVRLYIPSDI 633

Query: 664 RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
           RPLD R S+L +VQE++ RFP GLP+L+P++DM I++  + +++ + E  EH++++H L+
Sbjct: 634 RPLDKRTSVLKSVQEVKKRFPDGLPQLDPIEDMGIKEKGLKEVIRKTEAFEHRMYSHTLH 693

Query: 724 KSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            S   +     +++KA +  EI+ +K++++  +     DELK R RVL+++G+ +A  V+
Sbjct: 694 NSDKLKEYYELYEKKANIGTEIKGVKAELKKKRSLLQMDELKCRKRVLRRMGYCNASDVI 753

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
           +LKGR AC ID+ DE+L+TEL+FNG FNDL   ++ AL SCF+  +K+S    L   L+ 
Sbjct: 754 ELKGRVACEIDSADEILLTELLFNGVFNDLKAEEMCALLSCFVFQEKASAMPKLTEALSG 813

Query: 843 PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
           PL+Q+Q++AR+IA++  E KLEV  +EYV+S  +P +MDV++ W KG++FA++ +MTDIF
Sbjct: 814 PLRQMQDTARRIAKVSAEAKLEVEEEEYVDS-FKPHMMDVVHAWCKGSSFAQICKMTDIF 872

Query: 903 EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           EGSIIR  RRL+E + Q+  A++A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 873 EGSIIRCMRRLEETMRQMVGASKAIGNTELENKFAEGIRMIKRDIVFAASLYL 925


>gi|170038918|ref|XP_001847294.1| ATP-dependent RNA helicase DOB1 [Culex quinquefasciatus]
 gi|167862535|gb|EDS25918.1| ATP-dependent RNA helicase DOB1 [Culex quinquefasciatus]
          Length = 1045

 Score =  962 bits (2488), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/950 (50%), Positives = 654/950 (68%), Gaps = 45/950 (4%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEVAV   +        +     P   G+ AK Y F LDPFQ+ ++ C+E  +SVLV
Sbjct: 110  ACTHEVAVYPDHK-------YMPLVAP--TGKPAKEYQFVLDPFQKEAILCIENQQSVLV 160

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA +  +KQRVIYT+P+KALSNQKYRE H+EFKDVGL+TGDVT++
Sbjct: 161  SAHTSAGKTVVAEYAIAKSLAEKQRVIYTTPIKALSNQKYREFHEEFKDVGLVTGDVTIN 220

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCL+MTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 221  PSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNVHY 280

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+CH+HKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDEK  F+
Sbjct: 281  VFLSATIPNARQFAEWVCHIHKQPCHVVYTDYRPTPLQHYLFPVGGDGIHLVVDEKGTFK 340

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            EDNF         Q  G   +  +   +     + SG ++IFKIVKMIMER F PVI+FS
Sbjct: 341  EDNFNTAMAVL--QNAGEAAKGDQKGKKGGLKATNSGETNIFKIVKMIMERNFAPVIIFS 398

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FS+++CE +AM MSKLDFN+  EK  V++VF NA+D L+EEDR LP +E +LPLL+RGI 
Sbjct: 399  FSKKDCEIYAMQMSKLDFNSTTEKKLVDEVFNNAMDVLSEEDRQLPQVENVLPLLRRGIG 458

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG   R++ 
Sbjct: 459  IHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTGPRKFDGKDFRWVT 518

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRG DD+GI I+M+DE +     K++V GKP P+ S F L+Y  +LNL
Sbjct: 519  SGEYIQMSGRAGRRGLDDKGIVILMIDEAVSPAVGKEIVQGKPDPINSAFHLTYNMVLNL 578

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R E +   E++++ SF QFQ + ++P+I KKV + ++E   +    E  +  YH ++ 
Sbjct: 579  L-RVE-EINPEYMLERSFFQFQNQSSIPEIYKKVQRKQKELEGVHIKDEQSIMTYHNVRE 636

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP-SAGVGTLPS 635
             +  L K+    ITRP  ++ +L  GR+IK++    ++ WG++VN  K+   A    L S
Sbjct: 637  QLDTLGKQFRDYITRPTYLVPFLQPGRMIKIKSDAGEFEWGIIVNFKKETVDAKANPLKS 696

Query: 636  -----------------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPL 666
                                         RG   +VPV   L+  +S +R+  P DLRP 
Sbjct: 697  ETKVIIDVLLHVDDGFEKEGVPKPCPPSKRGSVEVVPVLHSLVHRISSLRVYYPNDLRPA 756

Query: 667  DARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ 726
            D R+S+L  + E++ RFP G P LNP+ DM I++ +  D V+ I++ E +LFAHPL+ S 
Sbjct: 757  DNRRSVLKTINEVKKRFPAGPPLLNPINDMHIKEKDFQDTVDLIDKFEKRLFAHPLHDSP 816

Query: 727  DENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            + +++   +  K E+   ++Q K+ +R+++     DELK+R RVL++LG+     V++ K
Sbjct: 817  ELDKLYTKYMGKLEIERALKQEKNSLREAKSLLHMDELKHRKRVLRRLGYCTTADVIEFK 876

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
            GR AC +   DELL+TE++FNGTF +L   Q  AL SCF+  +KS+E      EL+ PL+
Sbjct: 877  GRVACELSCADELLLTEMIFNGTFTNLTTAQACALLSCFVCDEKSTELPAATEELSGPLR 936

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            Q+Q+ AR+IA++ NECK+E++ + YVES  +PFLMDV+  W KG++F ++ +MTDIFEGS
Sbjct: 937  QMQDLARRIAKVSNECKVELDEERYVES-FKPFLMDVVLAWCKGSSFLQLCKMTDIFEGS 995

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IIR  RRL+E L Q+  A++ +G  +LE KFA A   L+R I+F+ SLYL
Sbjct: 996  IIRCMRRLEELLRQMVQASKTIGNTDLENKFADAIRLLKRDIVFAASLYL 1045


>gi|312380113|gb|EFR26198.1| hypothetical protein AND_07887 [Anopheles darlingi]
          Length = 1062

 Score =  962 bits (2488), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/945 (50%), Positives = 654/945 (69%), Gaps = 50/945 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEVAV         + +  T A     G  AK Y F LDPFQR ++ C+E N+SVLV
Sbjct: 106  ACTHEVAV-----YPDQDYVPLTAAT----GPPAKEYPFVLDPFQREAILCIENNQSVLV 156

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA +  DKQRVIYT+P+KALSNQKYRE H+EFKDVGL+TGDVT++
Sbjct: 157  SAHTSAGKTVVAEYAIAKSLADKQRVIYTTPIKALSNQKYREFHEEFKDVGLVTGDVTIN 216

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 217  PTASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 276

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDEK QF+
Sbjct: 277  VFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYLFPVGGDGIHLVVDEKGQFK 336

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMA--KGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            EDNF    +     +  G    G   GR    K  S SG ++IFKIVKMIMER F PVI+
Sbjct: 337  EDNFNTAMNVL---QSAGEAAKGDQKGRKGGLKATSSSGETNIFKIVKMIMERNFAPVII 393

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS+++CE +AM M+KLDFN+  EK  V++VF NA+D L EEDR LP +E +LPLL+RG
Sbjct: 394  FSFSKKDCEVYAMQMAKLDFNSTVEKKLVDEVFNNAMDVLTEEDRQLPQVENVLPLLRRG 453

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT+ +K+DG   R+
Sbjct: 454  IGIHHGGLLPILKETIEILFGEGLLKALFATETFAMGLNMPARTVLFTSPRKFDGKDFRW 513

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            + SGEYIQMSGRAGRRG DD+GI I+M+DE +     K++V GK  P+ S F L+Y  +L
Sbjct: 514  VTSGEYIQMSGRAGRRGLDDKGIVILMIDEAVSPAVGKEIVQGKADPINSAFHLTYNMVL 573

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NL+ R E +   E++++ SF QFQ + ++PDI K+V + +++  S+    E  +  YH +
Sbjct: 574  NLL-RVE-EINPEYMLERSFFQFQNQSSIPDIYKRVQEKQQKLKSIHIKEEQSITSYHHI 631

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
            +  +  L K+    ITRP  ++ +L  GR+IK+     ++ WG++VN  KK +A     P
Sbjct: 632  REQLDTLGKQFREYITRPVYLVPFLQPGRMIKIESDVGEFEWGIIVN-FKKENANSKQNP 690

Query: 635  -------------------------------SRGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                                            RG   +VPV   L++ +S +R+  P DL
Sbjct: 691  LKTEQKVVIDVLLHVADGFEREGIPKPCPPGKRGSVEVVPVLHKLVTRVSSLRVYCPNDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            RP D R+S+L  ++E++ RFPQG P LNP++DM I++ +   +V+ I++ E +LFAHPL+
Sbjct: 751  RPADNRRSVLKTIEEVKKRFPQGPPLLNPIEDMHIKEKDFQGIVDMIDKFEKRLFAHPLH 810

Query: 724  KSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            ++ +  ++   +  K E+  +++  KS +R+++      ELK+R RVL+ LG+  A  V+
Sbjct: 811  EAPELTRLYSKYMEKLELEKDLKNEKSALREARSLLHMSELKHRKRVLRWLGYCTAADVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            + KGR AC +   DELL+TE++FNGTF DL   Q  AL SCF+  +KS+E  +   EL+ 
Sbjct: 871  EFKGRVACELSCADELLITEMVFNGTFTDLGPAQSCALLSCFVCDEKSNEVPSSAEELSG 930

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+Q+ AR+IA++ NECK+E++ + YVES  +PFLMDV+  W KGA+FA++ +MTDIF
Sbjct: 931  PLRQMQDLARRIAKVSNECKVELDEERYVES-FKPFLMDVVLAWCKGASFADLCKMTDIF 989

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            EGSIIR  RRL+E L Q+  A++ +G  +LE KF+ A   L+R I
Sbjct: 990  EGSIIRCMRRLEELLRQMVQASKTIGNTDLENKFSEAIRLLKRDI 1034


>gi|157120596|ref|XP_001659679.1| helicase [Aedes aegypti]
 gi|108874885|gb|EAT39110.1| AAEL009067-PA [Aedes aegypti]
          Length = 1035

 Score =  962 bits (2486), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/951 (49%), Positives = 654/951 (68%), Gaps = 47/951 (4%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEVAV   +        +     P   G+ AK Y F LDPFQ+ ++ C+E  +SVLV
Sbjct: 100  ACTHEVAVYPDHK-------YMPLVPP--TGKAAKEYPFVLDPFQKEAILCIENQQSVLV 150

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQKYRE H+EFKDVGL+TGDVT++
Sbjct: 151  SAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKYREFHEEFKDVGLVTGDVTIN 210

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 211  PSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 270

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+CH+HKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDEK QF+
Sbjct: 271  VFLSATIPNARQFAEWVCHIHKQPCHVVYTDYRPTPLQHYLFPVGGDGIHLVVDEKGQFK 330

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            +DNF         Q  G   +  +   +     + SG ++IFKIVKMIMER F PVI+FS
Sbjct: 331  DDNFNTAMAVL--QNAGDAAKGDQKGKKGGLKATNSGETNIFKIVKMIMERNFAPVIIFS 388

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FS+++CE +AM MSKLDFN+  EK  V++VF NA+D L+EEDR LP +E +LPLL+RGI 
Sbjct: 389  FSKKDCEIYAMQMSKLDFNSTTEKKLVDEVFNNAMDVLSEEDRQLPQVENVLPLLRRGIG 448

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG   R++ 
Sbjct: 449  IHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTGPRKFDGKDFRWVT 508

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRG DD+GI I+M+DE +     K++V GKP P+ S F L+Y  +LNL
Sbjct: 509  SGEYIQMSGRAGRRGLDDKGIVILMIDEAVSPAVGKEIVQGKPDPINSAFHLTYNMVLNL 568

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R E +   E++++ SF QFQ + ++P+I KKV   ++E  S+    E  +  YH ++ 
Sbjct: 569  L-RVE-EINPEYMLERSFFQFQNQSSIPEIYKKVQLKQKELESVHIKDEQSIVSYHHIRD 626

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-- 634
             +  L K+    ITRP  ++ +L  GR+IK++    ++ WG++VN  KK +      P  
Sbjct: 627  QLDTLGKQFRDYITRPTYLIPFLQPGRMIKIQSDAGEFEWGIIVN-FKKETVDAKANPLK 685

Query: 635  -----------------------------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                                          RG   +VPV   L+  +S +R+  P DLRP
Sbjct: 686  AETKVIIDVLLHVDDGFEKEGVPKPCPPNKRGSVEVVPVLHTLVHRVSSLRVYYPNDLRP 745

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
             D R+S+L  + E++ RFP G P LNP+ DM I++ +   +V+ I++ E +LF+HPL++S
Sbjct: 746  ADNRRSVLKTINEVKKRFPDGPPLLNPINDMHIKEKDFQTIVDMIDKFEKRLFSHPLHES 805

Query: 726  QDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             + +++   +  K E+  +++Q K+  R+++     DELK+R RVL++LG+     V++ 
Sbjct: 806  PELDKLYTKYMEKLELERQLKQEKNAFREAKSLLHMDELKHRKRVLRRLGYCTTADVIEF 865

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC +   DELL+TE++FNGTF +L   Q  AL SCF+  +KSSE      EL+ PL
Sbjct: 866  KGRVACELSCADELLLTEMIFNGTFTNLTTSQACALLSCFVCDEKSSEVPAATEELSGPL 925

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+Q+ AR+IA++ NECK++++ + YVES  +PFLMDV+  W KG++F ++ +MTDIFEG
Sbjct: 926  RQMQDLARRIAKVSNECKVDLDEERYVES-FKPFLMDVVLAWCKGSSFLQLCKMTDIFEG 984

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  A++ +G  +LE KF+ A   L+R I+F+ SLYL
Sbjct: 985  SIIRCMRRLEELLRQMVQASKTIGNTDLENKFSEAIRLLKRDIVFAASLYL 1035


>gi|198415884|ref|XP_002131169.1| PREDICTED: similar to superkiller viralicidic activity 2-like 2
            [Ciona intestinalis]
          Length = 1037

 Score =  959 bits (2479), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/968 (50%), Positives = 653/968 (67%), Gaps = 59/968 (6%)

Query: 28   TKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVAC 87
            TK   +L   C HEVA  SG  + +   +    A P      AK Y F LDPFQ+ ++ C
Sbjct: 89   TKSMESLITGCTHEVAFQSGSDVPR---LLPKAAEP------AKEYKFILDPFQQEALLC 139

Query: 88   LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVG 147
            L+ N+SVLVSAHTSAGKT VAEYAIAM  RDKQRVIYT+P+KALSNQKYR+L++EF DVG
Sbjct: 140  LDNNQSVLVSAHTSAGKTVVAEYAIAMCLRDKQRVIYTTPIKALSNQKYRDLYEEFSDVG 199

Query: 148  LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
            LMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV+FDEIHYM+++ERGVVWEE+I
Sbjct: 200  LMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVVFDEIHYMRNKERGVVWEETI 259

Query: 208  IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
            I LP  ++ VFLSAT+ NA QFA WICHLHKQPCHVVYTD+RP PLQHY+FP GG GL+L
Sbjct: 260  ILLPDNVRYVFLSATIPNARQFASWICHLHKQPCHVVYTDYRPVPLQHYIFPAGGDGLHL 319

Query: 268  VVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS-GRMAKGGSGSGGSDIFKIVKMIME 326
            VVD+   FREDNF          +  G  +N K+   R  K G   G S   +IV++IME
Sbjct: 320  VVDDNGDFREDNFNTAMAVL---RDAG--DNAKSDFNRRGKQGGQRGKSGCIQIVELIME 374

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            RKF P IVFSFS++ECE +A  + KL FN+ EE+  V++VF NA+D L+EEDR LP +E 
Sbjct: 375  RKFLPAIVFSFSKKECEFYANQVQKLKFNSTEERKLVQEVFDNAMDSLSEEDRRLPQVEA 434

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
             LP +  GI +HH GLLP+IKE +E+LF EGL+K LFATETF+MG+NMPA TVVFT+++K
Sbjct: 435  CLPFVLNGIGIHHGGLLPIIKETIEILFSEGLIKVLFATETFSMGVNMPAHTVVFTSIRK 494

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG   R+I  GEYIQMSGRAGRRG D+ G+ I+MVDE++  +  K +V G P PL S F
Sbjct: 495  FDGKDFRWITGGEYIQMSGRAGRRGMDENGLVIMMVDEKLSPSVGKALVKGSPDPLDSAF 554

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
            RL+Y  +LNL+ R E +   E++++ SF+QFQ+  A+P++ + VSKLE E + +    E 
Sbjct: 555  RLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYTAIPEMLENVSKLETEYSEMKIKNEE 612

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP 626
            E   Y++++  + +L  +L   +  P+  L +L  GRL+KVR G  ++GWGVVVN  KK 
Sbjct: 613  ESMTYYRIRQQLNKLASQLEEFVHLPKFCLPFLQPGRLVKVRNGEHEFGWGVVVNFQKKQ 672

Query: 627  SAGVGTLPSRGGG--------------------------------------YIVPVQLPL 648
                G  P RGG                                        +VP+ LPL
Sbjct: 673  PKSSG--PMRGGDEPQPEYVVDVLLNCDKEGLHSVAVRLPRPAKDSLKSEMAVVPIMLPL 730

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            I  LS +RL +P DLRPLD RQS+L A++E++ RFP G+P L+PV+DM I+D  +  +V 
Sbjct: 731  IKALSSVRLFLPKDLRPLDNRQSLLRALEEVKKRFPDGIPLLDPVEDMSIKDDRLKSIVK 790

Query: 709  QIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            + E  E +++ HPL+   D  Q+ +  + K ++ +++++ K  ++ ++     DELK R 
Sbjct: 791  KTEAFERRMYKHPLHTRSDVTQVYQLCENKTKLANKVKEAKRALKKARTILQMDELKCRK 850

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            RVL++LG+     V++ KGR AC I   DELL+TEL+FNG FN+L   Q AAL  CF+  
Sbjct: 851  RVLRRLGYATMSDVIETKGRVACEISAADELLLTELIFNGVFNNLTPAQCAALLCCFVFD 910

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
            +KS     L  ELA PL+QL E+ARKIA++ NE KL ++ +EYV+   +  LMDV++ W 
Sbjct: 911  EKSKSIPKLSEELATPLRQLHETARKIAKVSNESKLVLDEEEYVQK-FKTMLMDVVHSWC 969

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
             G++FA++ +MTD+FEGSIIR  RRL+E L ++  AA+A+G  +LE KF+   + ++R I
Sbjct: 970  NGSSFAKIAEMTDVFEGSIIRCMRRLEELLREMCHAAKAIGNTHLENKFSEGIQLIKRDI 1029

Query: 948  MFSNSLYL 955
            +F+ SLYL
Sbjct: 1030 IFAASLYL 1037


>gi|406601717|emb|CCH46678.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
          Length = 1066

 Score =  959 bits (2478), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/982 (49%), Positives = 666/982 (67%), Gaps = 57/982 (5%)

Query: 20   TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDP 79
            +G   + S + +  L+    H+VAVPSGY    D    G           A+TY F LDP
Sbjct: 96   SGLMPKTSEEAKVKLSHQVRHQVAVPSGY----DYKPIGEHKR----SNEARTYPFTLDP 147

Query: 80   FQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL 139
            FQ  +++C++R+ESVLVSAHTSAGKT VAEYAIA +  +KQRVIYTSP+KALSNQKYREL
Sbjct: 148  FQDTAISCIDRSESVLVSAHTSAGKTVVAEYAIAQSLGEKQRVIYTSPIKALSNQKYREL 207

Query: 140  HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRER 199
              EF DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ER
Sbjct: 208  LAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKER 267

Query: 200  GVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFP 259
            GVVWEE+II LP  +  VFLSAT+ NA +FAEWIC +H QPCHVVYTDFRPTPLQHY+FP
Sbjct: 268  GVVWEETIILLPDKVHYVFLSATIPNAMEFAEWICKIHSQPCHVVYTDFRPTPLQHYLFP 327

Query: 260  VGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGSD 316
              G G++LVVDEK  FRE+NF K   +   ++        K+ G+     KGG+  G SD
Sbjct: 328  ANGDGIHLVVDEKSTFREENFQKAMASISDKQGDDPSAVDKSKGKKGQTFKGGNKDGKSD 387

Query: 317  IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNE 376
            I+KIVKMI  +K+ PVIVFSFS+R+CE  A+ MSKLDFNT+EE+DT+ ++F NAVD L E
Sbjct: 388  IYKIVKMIWIKKYNPVIVFSFSKRDCESLALKMSKLDFNTEEERDTLTKIFNNAVDVLPE 447

Query: 377  EDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPA 436
             DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPA
Sbjct: 448  SDRELPQIKHILPLLRRGIGIHHSGLLPILKEIIEILFQEGLLKVLFATETFSIGLNMPA 507

Query: 437  KTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVL 496
            KTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV 
Sbjct: 508  KTVVFTSVRKWDGKGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVK 567

Query: 497  GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
            G+   L S F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + +K+ ++EE+
Sbjct: 568  GEADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNAASVPVLERKLYEIEEQ 625

Query: 557  AASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGW 616
              ++    E+ V EY+ L+  +    + +   IT P  +L +L  GRL+K++ G  D+GW
Sbjct: 626  LKTITIEDESTVREYYDLRKQLDVYNEDVRHIITHPAHILTFLQGGRLLKIQIGEFDYGW 685

Query: 617  GVVVNVVKK--------------------------------------PSAGVGTLPSRGG 638
            GVVV+  K+                                      P+   G  P++ G
Sbjct: 686  GVVVDFQKRQNKRNKSETYTDHQSYIVNVLVNTMFADSPTNLIKPFQPNFPEGIRPAKEG 745

Query: 639  ----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
                  ++P+ L  I ++  +RL +P D++    ++++  ++ E++ RFP G+P L+PV+
Sbjct: 746  EKSKNEVLPITLESIKSVGNLRLYLPKDMKSNQQKETVSKSISEVQRRFPDGIPLLDPVE 805

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRD 753
            +MKIED E   L+ +IE LE KL+++PL+ S     +   +  K  +N + + LK K+ +
Sbjct: 806  NMKIEDSEFKTLLRKIEVLESKLYSNPLSLSPRLKTLYEEYSAKVALNDDAKSLKDKILE 865

Query: 754  SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
            +Q     D+L++R RVL++LG   A  V++LKGR AC I TGDELL+TE++FNG FN++ 
Sbjct: 866  AQAVIQLDDLRHRKRVLRRLGFTTASDVIELKGRVACEISTGDELLLTEMIFNGNFNEIT 925

Query: 814  HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
              Q AAL SCF+  ++S E   L+ ELA+PL+Q+QE A KIA+I  E K+E+   +Y+E 
Sbjct: 926  PEQSAALLSCFVFQERSKETPRLKPELAEPLKQMQEMASKIAKISKESKIEIVEKDYIE- 984

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
            T RP LM++++ W KGATF ++ +MTD++EGS+IR  +RL+E L QL  AA+ +G V LE
Sbjct: 985  TFRPELMEIVFAWCKGATFTQICKMTDVYEGSLIRMFKRLEEMLRQLVVAAKTIGNVALE 1044

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
            +K   A E + R I+ + SLYL
Sbjct: 1045 EKMEKAIELVHRDIVSAGSLYL 1066


>gi|302853630|ref|XP_002958329.1| hypothetical protein VOLCADRAFT_121704 [Volvox carteri f.
           nagariensis]
 gi|300256354|gb|EFJ40622.1| hypothetical protein VOLCADRAFT_121704 [Volvox carteri f.
           nagariensis]
          Length = 991

 Score =  958 bits (2477), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/990 (50%), Positives = 660/990 (66%), Gaps = 125/990 (12%)

Query: 37  SCVHEVAVPSGY---ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
           +C HEVAVP G+    L  D  +HGT   P+Y G  AK Y F LDPFQ  S+ACLER+ES
Sbjct: 56  TCTHEVAVPEGFDESTLKHDPEVHGTLHEPIYKGSRAKEYPFVLDPFQETSIACLERHES 115

Query: 94  VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFK-DVGLMTGD 152
           VLVSAHTSAGKT VAEYAIAM FR  QR        ALSNQK+REL + F  DVGLMTGD
Sbjct: 116 VLVSAHTSAGKTVVAEYAIAMGFRSNQR--------ALSNQKFRELSEAFAGDVGLMTGD 167

Query: 153 VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
           V+L+PNASC+VMTTEILR M+YRGSE+L+EVAWV+FDE+HYM+DRERGVVWEE+IIFL  
Sbjct: 168 VSLNPNASCIVMTTEILRSMIYRGSELLREVAWVVFDEVHYMQDRERGVVWEETIIFLDH 227

Query: 213 AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
             KMVFLSAT+SN++QFA W+ HLHK PCHVVYTD+RPTPLQHY +P GG GLYL++DE+
Sbjct: 228 RTKMVFLSATLSNSSQFAAWVAHLHKSPCHVVYTDYRPTPLQHYAYPSGGRGLYLLLDER 287

Query: 273 EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
             FR +NF KL+++                                  +  I  + ++PV
Sbjct: 288 GNFRTENFDKLRESL--------------------------------SMTAIKFQNWEPV 315

Query: 333 IVFSFSRRECEQHAMSMSK--------------------LDFNTQEEKDTVEQVFQNAVD 372
           I FSF+RR+CE +A ++                       DFNT++EK  VE+++ NA+ 
Sbjct: 316 IFFSFARRDCESYANALLARKEVRGKGGDPDREREKELLFDFNTEDEKSQVEEIYDNALQ 375

Query: 373 CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
           CL+E DR L  I  MLPLLKRGI VHHSGLLP++KEL+E+LFQEGL+K LF TETFAMGL
Sbjct: 376 CLSEADRQLKPISRMLPLLKRGIGVHHSGLLPILKELIEILFQEGLLKVLFTTETFAMGL 435

Query: 433 NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLK 492
           NMPA+ VVFTA++KWDG   R+I SGEYIQMSGRAGRRG DDRG+ ++M+D ++E  T +
Sbjct: 436 NMPARCVVFTAMRKWDGAESRWISSGEYIQMSGRAGRRGMDDRGLVVMMLDAELEEQTCR 495

Query: 493 DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTA--EHVIKNSFHQFQYEKALPDIGKKV 550
            ++ GKP+PL+S+F+L+YY++LN++ R EG  T   E+VI++SF QFQ E  LP + +++
Sbjct: 496 AIMQGKPSPLLSSFKLTYYTMLNMLRRLEGSDTGTMEYVIRHSFQQFQQESQLPKLEREL 555

Query: 551 SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
           + LE E A+L   GE  +A Y +L+ +IA+   +L + IT+P   L +L +GRL++V  G
Sbjct: 556 ADLEAEMAALGREGEEAMAAYQRLRTEIAEAGTQLQALITKPAHCLTFLRAGRLVRVSSG 615

Query: 611 GTDWGWGVVVNVVKKPSAGVGT-------------------------------------- 632
           G D+G GVVV+V+++P A   T                                      
Sbjct: 616 GVDFGTGVVVSVLRRPDAPPATADGGEDDRDAYLVDCILSLDASSLPGQDGGGSGDSGGP 675

Query: 633 LPSRGG-----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ-G 686
            P+  G       +VPV L  ++ L  +R+S+PPDLRP +AR+ +++ V EL  R  + G
Sbjct: 676 QPAAPGAPGSVAEVVPVTLSCLAQLHSLRISLPPDLRPEEARRGVMVQVGELLRRHGEAG 735

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQ 745
           LP+L+P++DM I DP + +++ +IE LE +L  +P+ K++ D  +   + R+A +    +
Sbjct: 736 LPRLDPIEDMDIRDPGLSEVIARIEALEVQLQRNPVFKAEKDAAKFAPYLRRAALAARAE 795

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
            L+++MR SQ+  F++E   R+ VL++LGHIDA+GV+ LKGRAAC IDT DELL +EL+ 
Sbjct: 796 TLRAEMRTSQLSAFKEEAACRTAVLRRLGHIDAEGVMTLKGRAACEIDTADELLASELLL 855

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
           NGTF+ L+  Q+ ALASC IP             +A PL QLQ +AR IAE+  ECKL++
Sbjct: 856 NGTFSSLESAQLVALASCLIP-------------MAGPLAQLQAAARHIAEVSRECKLDL 902

Query: 866 NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
           + DEYVES  +P LMDVIY WSKGATFA+V  MTDIFEGS++R+ RRLDE L QL  AA 
Sbjct: 903 DPDEYVES-FKPALMDVIYSWSKGATFAQVCDMTDIFEGSLVRATRRLDELLGQLANAAA 961

Query: 926 AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           AVG+  L  K   A+ ++RR IMF+ SLY+
Sbjct: 962 AVGDHTLADKIREATNTIRRDIMFAASLYI 991


>gi|198473097|ref|XP_001356169.2| GA17990 [Drosophila pseudoobscura pseudoobscura]
 gi|198139299|gb|EAL33229.2| GA17990 [Drosophila pseudoobscura pseudoobscura]
          Length = 1057

 Score =  956 bits (2471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/978 (49%), Positives = 665/978 (67%), Gaps = 57/978 (5%)

Query: 16   DLHVTGTPEEESTKKQRNL---TRSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMA 70
            D+  +GT E  +T+   +L     SC HEVA     A    E I      P+  + G  A
Sbjct: 99   DVDDSGTLEALNTRIVTHLLEAPESCTHEVA-----AYPDQEYI------PLQPFAGIPA 147

Query: 71   KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
            K Y F LDPFQR ++ C++ ++SVLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KA
Sbjct: 148  KEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKA 207

Query: 131  LSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
            LSNQK+RE   EFKDVGL+TGDVT++P+ASCL+MTTEILR MLYRGSE+++EV WV+FDE
Sbjct: 208  LSNQKFREFTDEFKDVGLVTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDE 267

Query: 191  IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
            IHYM+D+ERGVVWEE++I LP  ++ VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RP
Sbjct: 268  IHYMRDKERGVVWEETLILLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRP 327

Query: 251  TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG-- 308
            TPLQHY+FP GG G++L+VDEK QF+EDNF     T     +    E GK   +  KG  
Sbjct: 328  TPLQHYIFPAGGDGIHLIVDEKGQFKEDNF-----TTAMAVLANAGEAGKGDQKGRKGGI 382

Query: 309  -GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
             G  SG ++IFKIVKMIMER F PVI+FSFS+++CE  AM M+KLDFNT +EK  V++VF
Sbjct: 383  KGHNSGQTNIFKIVKMIMERNFAPVIIFSFSKKDCEIFAMQMAKLDFNTADEKKLVDEVF 442

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
             NA+D L++EDR LP +E +LPLL+RGI +HH GLLP++KE +E+LF EGL+KALFATET
Sbjct: 443  NNAMDVLSDEDRRLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATET 502

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
            FAMGLNMPA+TV+FTA +K+DG   R+I SGEYIQM+GRAGRRG DD+GI I+M+DE++ 
Sbjct: 503  FAMGLNMPARTVLFTAPRKFDGKDFRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVS 562

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
                +D+V GK  P+ S F L+Y  +LNL+ R E +   E++++ SF+QFQ + ALP + 
Sbjct: 563  PAVGRDIVQGKADPINSAFHLTYNMVLNLL-RVE-EINPEYMLERSFYQFQNQAALPRLH 620

Query: 548  KKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
             +V +   E   L    E  +A YH ++  +    K+    +TRP+ +L +L  GRL+KV
Sbjct: 621  DQVEQKTIELNKLSIKDEHNIASYHHIREQLESHGKQFRQWLTRPQYLLPFLQPGRLVKV 680

Query: 608  REGGTDWGWGVVVNVVK-----------KPSAGVGTL-----------------PS-RGG 638
              G  ++ WG+V+N  K           +PS  +  L                 P+ RG 
Sbjct: 681  SAGTQEYDWGIVLNFKKHDQSRKNPLKSEPSVTIDVLLHVSEAAAKSGDTEPCQPNERGC 740

Query: 639  GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
              +VPV   LI+ +S IR+  P DLR  D R+++L  +QE + RFP G P LNP+ DM I
Sbjct: 741  MEVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNI 800

Query: 699  EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQ 757
            +D E  D+V+ I + E +L  HPL+ S +  +I + +Q K ++  ++  +K++++ ++  
Sbjct: 801  KDREFRDIVDAIAQFESRLEEHPLHNSAELGRIHKRYQDKVKLQAQLTAIKAELKAARSL 860

Query: 758  KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
               +ELK+R RVL+++G+     V++ KGR AC + + DELL+TE++FNG FNDL   Q 
Sbjct: 861  LQMEELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLMTEMIFNGVFNDLTAPQA 920

Query: 818  AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
             AL SCF+  +KS E      EL+ PL+ +Q+ AR+IA++ +ECKLE++ D YV+   +P
Sbjct: 921  VALLSCFVCDEKSQEAPKSATELSGPLRSMQDLARRIAKVSSECKLELDADSYVDK-FKP 979

Query: 878  FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            FLMDV+  W KG++F  V +MTDIFEGSIIR  RRL+E L Q+  A++ +G  +LE KF+
Sbjct: 980  FLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQMCQASKTIGNTDLENKFS 1039

Query: 938  AASESLRRGIMFSNSLYL 955
                 L+R I+F+ SLYL
Sbjct: 1040 EGIRLLKRDIVFAASLYL 1057


>gi|332233909|ref|XP_003266147.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Nomascus
            leucogenys]
          Length = 1036

 Score =  956 bits (2471), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/953 (50%), Positives = 649/953 (68%), Gaps = 61/953 (6%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 219  NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 278

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 279  YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 338

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 339  REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 392

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 393  SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 452

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++ E +++LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 453  GIHHGGLLPILIETIKILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 512

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 513  SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 572

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 573  LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 630

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
              +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 631  QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 690

Query: 627  -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                               SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 691  DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 750

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
            RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 751  RPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 810

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 811  NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 870

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            ++KGR AC I   + L      F      +      AL SCF+  + SSE   L  +LA 
Sbjct: 871  EMKGRVACEISRCEPLHPAPNPF------VPFCLATALLSCFVFQENSSEMPKLTEQLAG 924

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 925  PLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 983

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 984  EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1036


>gi|194758417|ref|XP_001961458.1| GF14920 [Drosophila ananassae]
 gi|190615155|gb|EDV30679.1| GF14920 [Drosophila ananassae]
          Length = 1047

 Score =  951 bits (2459), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/952 (49%), Positives = 645/952 (67%), Gaps = 50/952 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVA             H       + G  AK Y F LDPFQR ++ C++ ++SVLV
Sbjct: 113  SCTHEVAA---------HPDHEYIPLKPFTGVPAKEYPFVLDPFQRQAILCIDNSQSVLV 163

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EFKDVGL+TGDVT++
Sbjct: 164  SAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFKDVGLVTGDVTIN 223

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  ++ 
Sbjct: 224  PSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVRY 283

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK  F+
Sbjct: 284  VFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGHFK 343

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKG---GSGSGGSDIFKIVKMIMERKFQPVI 333
            EDNF           +    E  K   +  KG   G+ +G ++IFKIVKMIMER F PVI
Sbjct: 344  EDNFSTAMAV-----LANAGEAAKGDQKSRKGGIKGANAGQTNIFKIVKMIMERNFAPVI 398

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L+ EDR LP +E +LPLL+R
Sbjct: 399  IFSFSKKDCEIYAMQMAKLDFNTADEKKLVDEVFNNAMDVLSAEDRRLPQVENVLPLLRR 458

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 459  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 518

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG DD+GI I+M+DE++     + +V GK  P+ S F L+Y  +
Sbjct: 519  WISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPAVGRGIVQGKADPINSAFHLTYNMV 578

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ALP + +KV +   E   +    E  +A YH 
Sbjct: 579  LNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHEKVEQKTAELNKIVIKDEHNIASYHH 636

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
            ++  +    K+    ITRP+ +L +L  GRLIKV  G  ++ WG+V+N  K+  +    L
Sbjct: 637  IRSQLDHYGKQFRQWITRPQYLLPFLQPGRLIKVSAGSQEYDWGIVLNFKKQDQSRKNPL 696

Query: 634  PS-----------------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
             S                             RG   +VPV   L++ +S IR+  P DLR
Sbjct: 697  KSEMSVTIDVLLHVSDAAAKSGDTEPCGPNERGCMEVVPVAHTLVTQISSIRVYFPNDLR 756

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              D R+++L  +QE + RFP G P LNP+ DM I+D E  ++V+ I + E +L  HPL+K
Sbjct: 757  SADNRRAVLKTIQEAKKRFPLGPPVLNPIDDMNIKDREFREIVSAIAQFEQRLDEHPLHK 816

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            S +  +I R +Q K  +  E+ +LK++++ ++     +ELK R RVL+++G+     V++
Sbjct: 817  STELERIYRRYQEKVALQSELTELKNELKAARSLLQMEELKYRKRVLRRMGYCKPGDVIE 876

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC + + DELL+TE++FNG FN+L   Q  AL SCF+  +KS+E      EL+ P
Sbjct: 877  FKGRVACELSSADELLMTEMIFNGVFNELTAPQALALLSCFVCDEKSTESPKSATELSGP 936

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +Q+ AR+IA++ +ECKL ++ D YV+   +PFLMDV+  W KG++F  V +MTDIFE
Sbjct: 937  LRSMQDLARRIAKVSSECKLTIDADSYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIFE 995

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L Q+  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 996  GSIIRCMRRLEELLRQMCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1047


>gi|328792380|ref|XP_624031.2| PREDICTED: superkiller viralicidic activity 2-like 2-like isoform 2
            [Apis mellifera]
          Length = 1008

 Score =  951 bits (2457), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/951 (51%), Positives = 651/951 (68%), Gaps = 60/951 (6%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--AKTYSFELDPFQRVSVACLERNESV 94
            SC HEVAVP  Y              P+ N +   AK Y F LDPFQ+ ++ C+E N+SV
Sbjct: 86   SCTHEVAVPPDYEYI-----------PLENKQSKPAKEYKFVLDPFQKEAILCIENNQSV 134

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE  +EFKDVGL+TGDVT
Sbjct: 135  LVSAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFFEEFKDVGLVTGDVT 194

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +
Sbjct: 195  INPTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNV 254

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA QF EW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  Q
Sbjct: 255  HYVFLSATIPNARQFVEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEMGQ 314

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQP 331
            F+E+NF +     L+     +   G + GR  KGG   S +G ++IFK+VKMIMER F P
Sbjct: 315  FKEENFNRAM-ACLQHSDAAK---GDSKGR--KGGIRPSNAGQTNIFKMVKMIMERNFAP 368

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VI+FSFS+++CE +AM M+KLD NT EEK  V++VF NA+D LNEEDR LP +E +LPLL
Sbjct: 369  VIIFSFSKKDCEIYAMQMAKLDLNTLEEKKLVDEVFNNAMDVLNEEDRRLPQVENVLPLL 428

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG  
Sbjct: 429  RRGIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTASRKFDGKD 488

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y 
Sbjct: 489  FRWITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYN 548

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +LNL+ R E +   E++++ SF+QFQ + ++PD+  KV  L+    ++       ++ Y
Sbjct: 549  MVLNLL-RVE-EINPEYMLERSFYQFQNQASIPDLYNKVKDLQGAYNAVTIDRYNHISSY 606

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV--------- 622
            H ++  +  L  +    +T+PE +L +L  GRL+KV+     + WG++VN          
Sbjct: 607  HDIREQLEHLSTEFRCFLTKPEYLLPFLQPGRLVKVKNENEMFDWGIIVNFKKKNPKNPI 666

Query: 623  -------------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                         + K S+    +P R    G   +VPV   LIS +S +RL  P DLRP
Sbjct: 667  RENTVIIIDILLHISKNSSEGCPVPCREGEEGDMEVVPVIHTLISQISSLRLYYPKDLRP 726

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
             D R+S+L  +QE++ RFP G P LNP+ DM IED    D+V +IE LE KL+AHPL+K 
Sbjct: 727  SDNRKSVLKTIQEVKKRFPDGPPLLNPITDMHIEDDAFKDIVKKIEVLEEKLYAHPLHKD 786

Query: 726  QDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             + N +   F  K ++ ++++Q K +++ ++     DELK R RVL+++ +  A  V++L
Sbjct: 787  PNVNILYEQFLHKEDLGNQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIEL 846

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKS+E      EL+ PL
Sbjct: 847  KGRVACELNGADELLMTEMIFNGLFNSLSVPQMVALISCFVCDDKSNEMPKSTEELSGPL 906

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +Q+Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W KGATF ++         
Sbjct: 907  RQMQDLARRIAKVSTEANLELDEDTYVER-FKPYLMDVVYAWCKGATFLQIC-------- 957

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 958  SIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1008


>gi|448107036|ref|XP_004200892.1| Piso0_003502 [Millerozyma farinosa CBS 7064]
 gi|448110044|ref|XP_004201523.1| Piso0_003502 [Millerozyma farinosa CBS 7064]
 gi|359382314|emb|CCE81151.1| Piso0_003502 [Millerozyma farinosa CBS 7064]
 gi|359383079|emb|CCE80386.1| Piso0_003502 [Millerozyma farinosa CBS 7064]
          Length = 1070

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/976 (49%), Positives = 649/976 (66%), Gaps = 58/976 (5%)

Query: 26   ESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSV 85
            E    Q  L     H+VAVP G+        +      V   E A+TY F LDPFQ  S+
Sbjct: 107  EEKPAQLQLRHQVRHQVAVPPGFD-------YKPIGEHVRKSE-ARTYPFTLDPFQDTSI 158

Query: 86   ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
            +C++R ESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYREL  EF D
Sbjct: 159  SCIDRGESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYRELQAEFVD 218

Query: 146  VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEE 205
            VGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ RGVVWEE
Sbjct: 219  VGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKSRGVVWEE 278

Query: 206  SIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGL 265
            +II LP  +  VFLSAT+ NA +FAEWI  +HKQPCHVVYTDFRPTPLQHY+FP  G G+
Sbjct: 279  TIILLPDKVHYVFLSATIPNAMEFAEWIVKIHKQPCHVVYTDFRPTPLQHYLFPAAGDGI 338

Query: 266  YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGSDIFKIVK 322
            +LVVDEK  FRE+NF K   + +   +G    +  + G+     KGG+  G SDI+KIVK
Sbjct: 339  HLVVDEKGTFREENFQKAMAS-ISDNMGDDPSSADSRGKKGQTFKGGNKDGKSDIYKIVK 397

Query: 323  MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
            MI  +++ PVIVFSFS+R+CE  A+ MSKLDFN  +E++ + +VF NA++ L + D+ LP
Sbjct: 398  MIYMKRYNPVIVFSFSKRDCEALALKMSKLDFNNDDEREALTKVFNNAINLLPDADKELP 457

Query: 383  AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
             I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT
Sbjct: 458  QIKNILPLLRRGIGIHHSGLLPILKEIIEILFQEGLLKVLFATETFSIGLNMPAKTVVFT 517

Query: 443  AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPL 502
            +V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L
Sbjct: 518  SVRKWDGKGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRL 577

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S F L Y  ILNLM R EG  + E ++++SF QFQ   A+P + +K+  L+ +      
Sbjct: 578  DSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNATAVPVLEQKLGVLQSKYEDFHI 635

Query: 563  SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV--- 619
              E  V EY+ LK  +   +      IT P  +L +L  GR+IKVR G  D+GWG+V   
Sbjct: 636  DDEGSVKEYYDLKQQLQTYQNDAQRVITHPGHILPFLQPGRVIKVRVGKDDYGWGMVTSF 695

Query: 620  ---------------------------------VNVVK--KPSAGVGTLPSRGG----GY 640
                                             VN++K   P    G  PS+ G      
Sbjct: 696  SKRTNKRNPSQTYTDHESYIVQVFVYTMFVDSPVNLIKPFTPLLPEGIRPSKSGEKSRAE 755

Query: 641  IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
             +P+ L  I  +S +RL VP DL+   A++++L  +++L  R P G+P +NPV+ MKIED
Sbjct: 756  YIPITLDSIEKISSVRLKVPEDLKSSSAKKNLLRTMKDLPKRLPDGIPLMNPVESMKIED 815

Query: 701  PEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
             +   L  +I+ LE KLF++PL+ S     +   +  K  +  E++ L+ K+ ++Q    
Sbjct: 816  EDFKSLSRKIDVLESKLFSNPLHDSARLTDLYEKYSEKVAIESEMKSLREKILEAQAVIQ 875

Query: 760  RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
             D+L++R RVL++LG    + +++LKGR AC I TGDELL+TEL+FNGTF+DL   Q AA
Sbjct: 876  LDDLRHRKRVLRRLGFTTQEDIIELKGRVACEISTGDELLLTELIFNGTFSDLTPEQCAA 935

Query: 820  LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
            L SCF+  +++ E   L+ ELA+PL+ +Q+ A +IA+I  ECK+E+   EYVES  RP L
Sbjct: 936  LCSCFVFQERAKEVPKLKPELAEPLKSMQDMATRIAKISRECKIEMVEKEYVES-FRPEL 994

Query: 880  MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            M+V Y WSKGA+F ++ +MTD++EGS+IR  +RL+E L Q+  AA+ +G V LE K   A
Sbjct: 995  MEVTYAWSKGASFTQICKMTDVYEGSLIRMFKRLEEMLRQMIMAAKTIGNVELENKMEKA 1054

Query: 940  SESLRRGIMFSNSLYL 955
             E + R I+ + SLYL
Sbjct: 1055 IELVHRDIVSAGSLYL 1070


>gi|380026693|ref|XP_003697079.1| PREDICTED: superkiller viralicidic activity 2-like 2 isoform 2 [Apis
            florea]
          Length = 1010

 Score =  949 bits (2452), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/949 (51%), Positives = 649/949 (68%), Gaps = 56/949 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVAVP  Y     E+            + AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 88   SCTHEVAVPPDYEYVPLES---------KQSKPAKEYKFVLDPFQKEAILCIENNQSVLV 138

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE  +EFKDVGL+TGDVT++
Sbjct: 139  SAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFFEEFKDVGLVTGDVTIN 198

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 199  PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 258

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QF EW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 259  VFLSATIPNARQFVEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEMGQFK 318

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF +     L+     +   G + GR  KGG   S +G ++IFK+VKMIMER F PVI
Sbjct: 319  EENFNRAM-ACLQHSDAAK---GDSKGR--KGGIRPSNAGQTNIFKMVKMIMERNFAPVI 372

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLD NT EEK  V++VF NA+D LNEEDR LP +E +LPLL+R
Sbjct: 373  IFSFSKKDCEIYAMQMAKLDLNTLEEKKLVDEVFNNAMDVLNEEDRRLPQVENVLPLLRR 432

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 433  GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTASRKFDGKDFR 492

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 493  WITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMV 552

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ++PD+  KV  L+    ++       ++ YH 
Sbjct: 553  LNLL-RVE-EINPEYMLERSFYQFQNQASIPDLYNKVKDLQGAYNAVTIDRYNHISSYHD 610

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
            ++  +  L  +    +T+PE +L +L  GRL+KV+     + WG++VN            
Sbjct: 611  IREQLEHLSSEFRCFLTKPEYLLPFLQPGRLVKVKNENEMFDWGIIVNFKKKNPKNPIRE 670

Query: 623  -----------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                       + K S+    +P R    G   +VPV   LIS +S +RL  P DLRP D
Sbjct: 671  NTVIIIDILLHISKNSSEGCPVPCREGEEGDMEVVPVIHTLISQISSLRLYYPKDLRPSD 730

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             R+S+L  +QE++ RFP G P LNP+ DM IED    D+V +IE LE KL+AH L+K  +
Sbjct: 731  NRKSVLKTIQEVKKRFPDGPPLLNPITDMHIEDDAFKDIVKKIEVLEEKLYAHSLHKDPN 790

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             N +   F  K ++ ++++Q K +++ ++     DELK R RVL+++ +  A  V++LKG
Sbjct: 791  VNILYEQFLHKEDLGNQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIELKG 850

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  DKS+E      EL+ PL+Q
Sbjct: 851  RVACELNGADELLMTEMIFNGLFNSLSVPQMVALISCFVCDDKSNEMPKSTEELSGPLRQ 910

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W KGATF ++         SI
Sbjct: 911  MQDLARRIAKVSTEANLELDEDTYVER-FKPYLMDVVYAWCKGATFLQIC--------SI 961

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IR  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 962  IRCMRRLEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1010


>gi|195438088|ref|XP_002066969.1| GK24759 [Drosophila willistoni]
 gi|194163054|gb|EDW77955.1| GK24759 [Drosophila willistoni]
          Length = 1049

 Score =  947 bits (2448), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/995 (48%), Positives = 663/995 (66%), Gaps = 66/995 (6%)

Query: 12   APEEDLHVTGTPEEESTKKQRNL----------TRSCVHEVAVPSGYALTKDEAIHGTFA 61
            A EE + +    EE ST +Q +L          TR   H++  P       +   H   A
Sbjct: 70   AAEEKVKLEEDDEEPSTSRQLDLDDAATLDALRTRIVTHQLEAP-------ESCTHEVAA 122

Query: 62   NP--------VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIA 113
            +P         ++G  AK Y F LDPFQ+ ++ C++ ++SVLVSAHTSAGKT VAEYAIA
Sbjct: 123  HPDQEYIPLKPFSGVPAKEYPFVLDPFQKQAILCIDNSQSVLVSAHTSAGKTVVAEYAIA 182

Query: 114  MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGML 173
             +   KQRVIYT+P+KALSNQK+RE   EF DVGL+TGDVT++P+ASCL+MTTEILR ML
Sbjct: 183  KSLLAKQRVIYTTPIKALSNQKFREFTDEFTDVGLVTGDVTINPSASCLIMTTEILRNML 242

Query: 174  YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
            YRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  ++ VFLSAT+ NA QFAEW+
Sbjct: 243  YRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVRYVFLSATIPNARQFAEWV 302

Query: 234  CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG 293
            CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK QF+EDNF             
Sbjct: 303  CHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFKEDNFTTAMAVLAN---A 359

Query: 294  GRRENGKASGRMAKG---GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
            G    G   GR  KG   G+ +G ++IFKIVKMIMER F PVI+FSFS+++CE +AM M+
Sbjct: 360  GEAAKGDQKGR--KGGIKGANAGQTNIFKIVKMIMERNFAPVIIFSFSKKDCEIYAMQMA 417

Query: 351  KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
            KLDFNT EEK  V++VF NA++ L+EEDR LP +E +LPLL+RGI +HH GLLP++KE +
Sbjct: 418  KLDFNTPEEKKLVDEVFYNAMEVLSEEDRTLPQVENVLPLLRRGIGIHHGGLLPILKETI 477

Query: 411  ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
            E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R+I SGEYIQM+GRAGRR
Sbjct: 478  EILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFRWISSGEYIQMAGRAGRR 537

Query: 471  GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
            G DD+GI I+M+DE++     +++V GK  P+ S F L+Y  +LNL+ R E +   E+++
Sbjct: 538  GLDDKGIVILMIDEKVSPAVGREIVQGKADPINSAFHLTYNMVLNLL-RVE-EINPEYML 595

Query: 531  KNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEIT 590
            + SF+QFQ + ALP +  +V +   E        E  +A YH ++  + Q  K+  S IT
Sbjct: 596  ERSFYQFQNQAALPGLHDQVEEKTRELNKHSIKDEHNIASYHHIRDQLEQYGKQFRSWIT 655

Query: 591  RPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK---------KPSAGV----------- 630
            +P  +L +L  GRLIKV     ++ WG+V+N            KP  GV           
Sbjct: 656  KPHYLLPFLQPGRLIKVTADNQEYDWGIVLNFKNHEKARKNPLKPDPGVTIDVLLHVSEE 715

Query: 631  -----GTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
                  T P     RG   +VPV   LI+ +S IR+  P DLR  D R+++L  +QE + 
Sbjct: 716  ASKSGDTEPCKPNERGCMEVVPVANTLITQISSIRVYFPNDLRSADNRKAVLKTIQEAKK 775

Query: 682  RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEV 740
            RFP G P L+PV DM+I+D E  ++V  I + E  L  HPL+KS D  ++ + +  K ++
Sbjct: 776  RFPLGPPVLDPVDDMQIKDKEFRNIVAAIAQFEKNLEEHPLHKSADLERVHKRYLDKMKL 835

Query: 741  NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
              E+  LK +++ ++     +ELK+R RVL+++G+     V++ KGR AC + + DELL+
Sbjct: 836  LGELNDLKVELKAARSLLQMEELKHRKRVLRRMGYCKPGDVIEFKGRVACELSSADELLM 895

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            TE++FNG FN+L   Q  AL SCF+  +KS+E      EL+ PL+ +Q+ AR+IA++ +E
Sbjct: 896  TEMIFNGVFNELTPPQAVALLSCFVCDEKSNESPQSATELSGPLRSMQDLARRIAKVSSE 955

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            CKLE++ D YV+   +PFLMDV+  W KG++F  V +MTDIFEGSIIR  RRL+E L Q+
Sbjct: 956  CKLELDADSYVDK-FKPFLMDVVLAWCKGSSFLAVCKMTDIFEGSIIRCMRRLEELLRQM 1014

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1015 CQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1049


>gi|344299537|gb|EGW29890.1| hypothetical protein SPAPADRAFT_57398 [Spathaspora passalidarum NRRL
            Y-27907]
          Length = 1043

 Score =  947 bits (2447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/995 (49%), Positives = 660/995 (66%), Gaps = 61/995 (6%)

Query: 7    AGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYN 66
            A +  A    L  + TP  E   K R+  R   H+VA+P  Y  T   A H         
Sbjct: 64   ASREVAVSAGLLSSATPTPEDKLKLRHQVR---HQVAIPPSYPYTPI-AEHKRVKE---- 115

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
               A+TY F LDPFQ  S++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTS
Sbjct: 116  ---ARTYPFVLDPFQDTSISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTS 172

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYREL  EF DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWV
Sbjct: 173  PIKALSNQKYRELQAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWV 232

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HYM+D+ RGVVWEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYT
Sbjct: 233  IFDEVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYT 292

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG---GRRENGKA-S 302
            DFRPTPLQHY+FP GG G++LVVDEK  FRE+NF K   T +    G      + GK   
Sbjct: 293  DFRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMAT-ISDNTGDDPSSADKGKGKK 351

Query: 303  GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
            G+  KGG G   SDI+KIVKMI  +++ PVIVFSFS+R+CE+ A+ MSKLDFNT EE++ 
Sbjct: 352  GQTFKGGKGDASSDIYKIVKMIYMKRYNPVIVFSFSKRDCEKLALKMSKLDFNTDEEREA 411

Query: 363  VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            + ++FQNA++ L E D++LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K L
Sbjct: 412  LTKIFQNAINLLPEADKDLPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVL 471

Query: 423  FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
            FATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+
Sbjct: 472  FATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMI 531

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            DE+ME    K MV G+   L S F L Y  ILNLM R EG  + E ++++SF QFQ   +
Sbjct: 532  DEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLESSFFQFQNAAS 589

Query: 543  LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
            +P + K + +L  E   +    E  V +Y++ K  + + +  +   IT P  +L +L  G
Sbjct: 590  VPVMQKSMDELSVELEQIQVDDEPTVKDYYEFKAQLTKYQADMRKVITHPGHILPFLQEG 649

Query: 603  RLIKVREGGTDWGWGVVVNVVKK-----------------------------------PS 627
            R++KV+ G  D+ WG+VV+  K+                                   P 
Sbjct: 650  RVVKVKVGEHDYDWGMVVSFAKRNAKNQDFTPHEAYIVTVFVCTMFVDSPVNLIKSFNPV 709

Query: 628  AGVGTLPSRGG-----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
               G  P+  G        +P+ L  I  +S +RL VP DL+  +A++S++  +++L  R
Sbjct: 710  LPEGIRPAVRGSEKSRAEYIPITLDSIEKISSVRLRVPSDLKSAEAKRSLVKTLKDLPKR 769

Query: 683  FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVN 741
             P G+P ++PV+ MKI D E   L+ +I+ LE KL ++PL N ++       +  K E+ 
Sbjct: 770  LPDGIPLMDPVESMKINDNEFKLLLRKIDVLEAKLVSNPLHNTARLAPLYEKYASKVEIE 829

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLV 800
            ++I+ LK K+ +++     D+L+NR RVL++LG    D  +++LKGR AC I TGDELL+
Sbjct: 830  NKIKSLKEKILEAEAVIQLDDLRNRKRVLRRLGFTKTDNDIIELKGRVACEISTGDELLL 889

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            TEL+FNG FN+L   Q AAL SCF+  +++ E   L+ ELA+PL+ +QE A K+A++  E
Sbjct: 890  TELIFNGNFNELTPEQCAALLSCFVFQERAKEVPRLKPELAEPLKSMQEMATKVAKVSRE 949

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            CK+++   +YVES  R  LM+V + W KGATF+++ +MTD+FEGS+IR  RRL+E + QL
Sbjct: 950  CKIDIIEKDYVES-FRAELMEVTFAWCKGATFSQICKMTDVFEGSLIRMFRRLEELIRQL 1008

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              AA+A+G   LE K  AA E + R I+ + SLYL
Sbjct: 1009 VIAAKAIGNSELETKMEAALELVHRDIVSAGSLYL 1043


>gi|260946459|ref|XP_002617527.1| hypothetical protein CLUG_02971 [Clavispora lusitaniae ATCC 42720]
 gi|238849381|gb|EEQ38845.1| hypothetical protein CLUG_02971 [Clavispora lusitaniae ATCC 42720]
          Length = 1066

 Score =  947 bits (2447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/985 (48%), Positives = 657/985 (66%), Gaps = 69/985 (7%)

Query: 23   PEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM-----AKTYSFEL 77
            P E + K    L     H+VA+P  Y              P+  GE      A+TY F L
Sbjct: 99   PSENTEKTGLKLKHQVRHQVAIPPDYPYI-----------PI--GEHKRKSEARTYPFTL 145

Query: 78   DPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYR 137
            DPFQ  +++C++R+ESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYR
Sbjct: 146  DPFQDTAISCIDRDESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYR 205

Query: 138  ELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDR 197
            EL  EF DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+
Sbjct: 206  ELLAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDK 265

Query: 198  ERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYV 257
             RGVVWEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTDFRPTPLQHY+
Sbjct: 266  SRGVVWEETIILLPDKVHHVFLSATIPNAMEFAEWIVKIHNQPCHVVYTDFRPTPLQHYL 325

Query: 258  FPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG----GRRENGKASGRMAKGGSGSG 313
            FP  G G++LVVDE   FRE+NF K   + +   IG         GK +G+  KGG+  G
Sbjct: 326  FPAAGDGIHLVVDEMGTFREENFQKAMSS-ISNNIGDDPAATESRGKKNGQTFKGGNKDG 384

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
             SDI+KIVKMI  +++ PVIVFSFS+R+CE  A+ MSKLDFN  +E+  + ++F NA+  
Sbjct: 385  KSDIYKIVKMIYMKRYNPVIVFSFSKRDCESLALKMSKLDFNNDDERSALTKIFDNAISL 444

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLN
Sbjct: 445  LPEGDRELPQIKNILPLLRRGIGIHHSGLLPILKEIIEILFQEGLLKVLFATETFSIGLN 504

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
            MPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K 
Sbjct: 505  MPAKTVVFTSVRKWDGKGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKG 564

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            MV G+   L S F L Y  ILNLM R EG  + E ++++SF+QFQ   A+P + +++ KL
Sbjct: 565  MVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLESSFYQFQNASAVPVLEQQLQKL 622

Query: 554  EEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD 613
              E  S     E  V EY+ LK  +   E+ + S +T P  +L +L  GR+IK+R G  D
Sbjct: 623  TLEYNSTKVDDEYLVKEYYDLKKQLKTYEEDVRSVVTHPGHILPFLQPGRVIKIRVGEHD 682

Query: 614  WGWGVVVNVVKK--------------------------------------PSAGVGTLPS 635
            +GWG+V +  K+                                      P    G  P+
Sbjct: 683  YGWGMVASFSKRTNKRNPSQTYTDHESYVVSVFVCTMFVDSPVGLIKPFNPDLPEGIRPA 742

Query: 636  RGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN 691
            + G       +P+ L  I  +S +RL +P D +   A++S++  +++L  + P G+P +N
Sbjct: 743  QEGEKARAEYIPITLDSIQAISSVRLKIPEDFKSSSAKRSMVRTLKDLPKKLPDGIPLMN 802

Query: 692  PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSK 750
            PV  MKI+DP+   L+ +I+ LE KL ++PL++S     +   F +K +++ +I++ K K
Sbjct: 803  PVDSMKIDDPDFKMLLRKIDVLEGKLASNPLHESDRITDLYAKFSQKMDIDAKIRETKEK 862

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
            +  +Q     D+L++R RVL+KL  + A+ +++LKGR AC I TGDELL+TEL+FNGTFN
Sbjct: 863  ILQAQAVIQLDDLRHRKRVLRKLAFVTANDIIELKGRVACEISTGDELLLTELIFNGTFN 922

Query: 811  DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
            +L   Q AAL SCF+  +++ E   L+ ELA+PL+ +Q+ A ++A+   +CK+EV   +Y
Sbjct: 923  NLGPEQCAALLSCFVFQERAKEVPRLKPELAEPLKAMQDMATRLAKTYKDCKIEVVEKDY 982

Query: 871  VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
            VES  RP LM+V Y W KGA+F ++ +MTD++EGS+IR+ RRL+E + Q+ AAA+ +G V
Sbjct: 983  VES-FRPELMEVTYAWCKGASFTQICKMTDVYEGSLIRTFRRLEEMIRQMEAAAKTIGNV 1041

Query: 931  NLEKKFAAASESLRRGIMFSNSLYL 955
             L++K   A+E + R I+ + SLYL
Sbjct: 1042 ELQEKMEKAAELVHRDIVSAGSLYL 1066


>gi|384484103|gb|EIE76283.1| hypothetical protein RO3G_00987 [Rhizopus delemar RA 99-880]
          Length = 1061

 Score =  946 bits (2445), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/963 (49%), Positives = 652/963 (67%), Gaps = 51/963 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VAVP  Y        H   A+P      A+ Y F LDPFQRV+V+ +ERNES
Sbjct: 109  LSHQVRHQVAVPPNYPYVPISQ-HVPPADP------ARVYPFTLDPFQRVAVSSIERNES 161

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++KQRVIYTSP+KALSNQKYRE  +EF DVGLMTGDV
Sbjct: 162  VLVSAHTSAGKTVVAEYAIAQCLKNKQRVIYTSPIKALSNQKYREFTEEFGDVGLMTGDV 221

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSEV++EVAWV++DEIHYM+D ERGVVWEESII LP  
Sbjct: 222  TINPQASCLVMTTEILRSMLYRGSEVIREVAWVVYDEIHYMRDSERGVVWEESIILLPDV 281

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA +FAEWIC +H+QPCH+VYTDFRPTPLQHY+FP GG G++LVVDEK 
Sbjct: 282  VRYVFLSATIPNAMEFAEWICKIHQQPCHIVYTDFRPTPLQHYLFPAGGDGIHLVVDEKS 341

Query: 274  QFREDNFVKLQDTFLKQK---IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ 330
            +FRED+F K        K     G R  GK       G +  G +DI++I+KM+M + + 
Sbjct: 342  RFREDSFQKAIAALSDGKGDDPSGTRARGKKGKTYKGGNANDGPADIYRIIKMVMMKNYH 401

Query: 331  PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
            PVIVFSFS++ECE +A+ MSKLDFN + E+D V QVF NA+  LNE+DR LP I+ +LPL
Sbjct: 402  PVIVFSFSKKECEANALLMSKLDFNDENERDMVSQVFTNAISGLNEDDRQLPQIQQLLPL 461

Query: 391  LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
            L+RGI VHH GLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+DG 
Sbjct: 462  LRRGIGVHHGGLLPIMKETIEVLFQEGLLKVLFATETFSIGLNMPAKTVVFTSVRKYDGK 521

Query: 451  SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
              R++ SGEYIQMSGRAGRRG D+RG+ I+M+DE+ME    K MV G+   + S F LSY
Sbjct: 522  GTRWVTSGEYIQMSGRAGRRGLDERGVVIMMIDEKMEPAVAKGMVKGESDRMNSAFHLSY 581

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE 570
              ILNL+ R EG  + E++++  F+ FQ +  +P   K++ +LEEE  S+    E E++ 
Sbjct: 582  NMILNLL-RVEG-VSPEYMLEKCFYTFQSDSNIPQFEKQLKQLEEEKNSIIIKDEEEISG 639

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK------ 624
            Y++L+  I    + +   +  P   L ++  GRL++V     D+GWGV++N  K      
Sbjct: 640  YYELRKQIDTFTQDVHDVMIHPTYALPFMQPGRLVRVEHDKMDFGWGVILNHQKVFGKKR 699

Query: 625  -------------------------KPSAG--VGTLPSRGGG----YIVPVQLPLISTLS 653
                                     K +AG   G  P+         ++PV L  I ++S
Sbjct: 700  ASDGEREVNYVVDVLLNCSQDSSLAKDAAGQPTGVRPATNDDNRNLLVIPVSLRAIQSIS 759

Query: 654  KIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEEL 713
             IRL +P DLR  DAR+++  ++ E++ RF   +P L+P+ +M I+DP    LV++I  L
Sbjct: 760  HIRLVLPKDLRSSDARKTVYKSILEVKKRFQGNIPLLDPINNMGIKDPSFQKLVSKILNL 819

Query: 714  EHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKK 772
            E K+  HPL+KS+D  N    + +K E+  +++ LK K+ D+Q     +ELKNR RV+++
Sbjct: 820  EKKVMEHPLSKSEDLPNMYEVYTKKMEIVDKMKSLKRKLVDAQSIVQLEELKNRKRVMRR 879

Query: 773  LGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSE 832
            LG   +  VV++KGR AC I TGDELL+TE++F G FNDL   Q  A+ SCF+  +K   
Sbjct: 880  LGFTTSSDVVEMKGRVACEISTGDELLLTEMIFQGVFNDLTVDQSVAVLSCFVFDEKVDV 939

Query: 833  QINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATF 892
            +  L+ EL+ PL+ +QE+AR+IA++  ECK+ ++ +EYV +  +P LMDV++ W +GA F
Sbjct: 940  KAKLQEELSAPLRLMQETARRIAKVATECKMPLDEEEYV-AKFKPELMDVVFAWCQGAKF 998

Query: 893  AEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNS 952
            +++ +MT ++EGS+IR  RRL+E L Q+ AAA+++G   LE KF+     + R I+F+ S
Sbjct: 999  SQICKMTTVYEGSLIRVFRRLEELLRQMCAAAKSIGNTELENKFSEGINRIHRDIIFAAS 1058

Query: 953  LYL 955
            LYL
Sbjct: 1059 LYL 1061


>gi|383856639|ref|XP_003703815.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Megachile
            rotundata]
          Length = 1007

 Score =  945 bits (2442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/949 (50%), Positives = 648/949 (68%), Gaps = 56/949 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            S  HEVAVP  Y       +      P      AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 85   SSTHEVAVPPDYEYV---PLERKVTKP------AKEYKFLLDPFQKEAILCIENNQSVLV 135

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + RDKQRVIYT+P+KALSNQKYRE ++EFKDVGL+TGDVT++
Sbjct: 136  SAHTSAGKTVVAEYAIACSLRDKQRVIYTTPIKALSNQKYREFYEEFKDVGLVTGDVTIN 195

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 196  PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 255

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+  LHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 256  VFLSATIPNARQFAEWVADLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEMGQFK 315

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF +           G    G   GR  KGG   + +G ++IFK+VKMIMER F PVI
Sbjct: 316  EENFNRAMACLQH----GDAAKGDTKGR--KGGIRPTNAGQTNIFKMVKMIMERNFAPVI 369

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLD NT EEK  V++VF NA+D L+EEDR LP +E +LPLL+R
Sbjct: 370  IFSFSKKDCEIYAMQMAKLDLNTLEEKKLVDEVFNNAMDVLSEEDRRLPQVENVLPLLRR 429

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 430  GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTASRKFDGKDFR 489

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQMSGRAGRRG D++GI I+M+DEQ+     K ++ GKP P+ S F L+Y  +
Sbjct: 490  WITSGEYIQMSGRAGRRGLDEKGIVILMIDEQVSPVIGKAIIQGKPDPINSAFHLTYNMV 549

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ++P++  KV +L+    ++       ++ YH 
Sbjct: 550  LNLL-RVE-EINPEYMLERSFYQFQNQASIPNLYNKVKELQASYNAVTVDKYNHISSYHG 607

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
            ++  + +L  +  S +T+PE +L +L  GRL+KV+     + WG++VN            
Sbjct: 608  IREQLERLSTEFRSFLTKPEYLLPFLQPGRLVKVKNENETFDWGIIVNFKKKNPKNPVKE 667

Query: 623  -----------VKKPSAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                       + K S     +P R G      +VPV   LIS +S +RL  P DLRP D
Sbjct: 668  NTVIIIDILLHISKESTEGCPIPCRDGEEGDMEVVPVLHTLISQISSLRLYYPKDLRPSD 727

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             R+S+L  +QE++ RFP G P LNP  DM IED    D++ +IE LE KL+ HPL+K  +
Sbjct: 728  NRKSVLKTIQEVKKRFPNGPPLLNPTTDMHIEDEGFKDIIKKIEVLEEKLYVHPLHKDPN 787

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             N +   F  K E+ ++++Q K +++ ++     DELK R RVL+++ +  A  V++LKG
Sbjct: 788  VNTLYEQFLHKEELGNQLKQAKLELKQAKSILQMDELKCRKRVLRRMAYCTASDVIELKG 847

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC ++  DELL+TE++FNG FN L+  Q+ AL SCF+  DKS+E   +  EL+ PL+Q
Sbjct: 848  RVACELNGADELLMTEMIFNGLFNSLNVPQMVALISCFVCDDKSNEMPKITEELSGPLRQ 907

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W KGA+F ++         SI
Sbjct: 908  MQDLARRIAKVSTEANLELDEDTYVER-FKPYLMDVVYAWCKGASFLKIC--------SI 958

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IR  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 959  IRCMRRLEEVLRQLCQAAKNIGNTDLENKFSEAIKLIKRDIVFAASLYL 1007


>gi|194223879|ref|XP_001916412.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
            2-like 2-like [Equus caballus]
          Length = 1047

 Score =  945 bits (2442), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/958 (49%), Positives = 650/958 (67%), Gaps = 60/958 (6%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 159  VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 218

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKD-----RERGVVWEESIIFL 210
            +P ASCLVMTTE++   ++   E+ ++   ++F+++           ERGVVWEE+II L
Sbjct: 219  NPTASCLVMTTEVIYWSIFLIIELERKXFXILFNKVTLNSKVCLFFSERGVVWEETIILL 278

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVD
Sbjct: 279  PDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVD 338

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ 330
            E   FREDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQ
Sbjct: 339  ENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQ 392

Query: 331  PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
            PVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPL
Sbjct: 393  PVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPL 452

Query: 391  LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
            LKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG 
Sbjct: 453  LKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGK 512

Query: 451  SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
              R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y
Sbjct: 513  DFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTY 572

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE 570
              +LNL+ R E +   E++++ SF+QFQ+ +A+P + +KV   E++   +    E  V  
Sbjct: 573  NMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKSSEQQYNKIVIPNEESVVI 630

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP---- 626
            Y+K++  +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK     
Sbjct: 631  YYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKP 690

Query: 627  ------------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLS 658
                                    SA     P+    +G   +VPV + L+S +S +RL 
Sbjct: 691  NSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLY 750

Query: 659  VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
            +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH+++
Sbjct: 751  IPKDLRPMDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMY 810

Query: 719  AHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
            +HPL N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   
Sbjct: 811  SHPLHNDPNLETVYTLCEKKAQIAMDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFAT 870

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
            +  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L 
Sbjct: 871  SSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLT 930

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
             +LA PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +
Sbjct: 931  EQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICK 989

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 990  MTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 1047


>gi|344233814|gb|EGV65684.1| antiviral helicase [Candida tenuis ATCC 10573]
          Length = 1063

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/1008 (47%), Positives = 670/1008 (66%), Gaps = 83/1008 (8%)

Query: 1    MEESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTF 60
            + + L+A K   P+ + H +G         Q  L     H+VA+P G+            
Sbjct: 86   ISDGLLASK---PDPNGHPSG---------QLKLKHQVRHQVAIPPGFPYV--------- 124

Query: 61   ANPVYNGEM---AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFR 117
              P+   +    A+ Y F+LDPFQ  S++C++RNESVLVSAHTSAGKT VAEYAIA + R
Sbjct: 125  --PISEHKRQNDARRYPFKLDPFQDTSISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLR 182

Query: 118  DKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS 177
            DKQRVIYTSP+KALSNQKYREL  EF DVGLMTGDVT++P+A CLVMTTEILR MLYRGS
Sbjct: 183  DKQRVIYTSPIKALSNQKYRELQAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGS 242

Query: 178  EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH 237
            EV++EVAWVIFDE+HYM+D+ RGVVWEE++I LP  +  VFLSAT+ NA +FAEWI  +H
Sbjct: 243  EVMREVAWVIFDEVHYMRDKSRGVVWEETMILLPDKVHYVFLSATIPNAMEFAEWIVKIH 302

Query: 238  KQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE 297
            +QPCHVVYTDFRPTPLQHY+FP GG G++LVVDEK  FRE+NF K     + Q   G  E
Sbjct: 303  EQPCHVVYTDFRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKA----MAQISDGMGE 358

Query: 298  NGKA-------SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
            +  A        G+  KGG+  G +DI+KIVKMI  +++ PVIVFSFS+R+CE  A+ MS
Sbjct: 359  DPGAVDGKKGKKGQTWKGGNNDGKTDIYKIVKMIYMKRYNPVIVFSFSKRDCETLALKMS 418

Query: 351  KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
            +LDFN  +E+D + ++F NA+  L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++
Sbjct: 419  RLDFNNDDERDALTKIFNNAIGLLPESDRELPQIKNILPLLRRGIGIHHSGLLPILKEII 478

Query: 411  ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
            E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRR
Sbjct: 479  EILFQEGLLKVLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRR 538

Query: 471  GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
            G DDRGI I+M+DE+ME    K MV G+   L S F L Y  +LNLM R EG  + E ++
Sbjct: 539  GLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMLLNLM-RVEG-ISPEFML 596

Query: 531  KNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEIT 590
            ++SF QFQ   ++P +  ++ +L  + ++++   E  + EY++ K+ +++L++     IT
Sbjct: 597  ESSFFQFQSASSVPKMESQLVELTNQLSTINIDDENLIKEYYEFKVQLSKLQEDSQKIIT 656

Query: 591  RPERVLYYLGSGRLIKVREGGTDWGWGVV------------------------------- 619
             P  +L YL SGR+IKV+ G  D+GWG+V                               
Sbjct: 657  HPGHILPYLQSGRVIKVKIGDMDYGWGMVQSFSKRANKRNSSAIYSDHESYLVQVFIYSL 716

Query: 620  -----VNVVK--KPSAGVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDA 668
                 VN++K   P    G  PS+ G       +P+ L  I  +S +RL VP D +   A
Sbjct: 717  FVDSPVNLIKSFNPDLPEGIRPSKSGEQSRAEYIPITLSSIEKISSVRLKVPADFKSSSA 776

Query: 669  RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE 728
            ++++L  +++L  + P G+P ++PV  MKI+D E   L+ +I+ +E KL  +PL+ S   
Sbjct: 777  KRNLLKTLKDLPKKLPDGIPIMDPVNSMKIDDDEFKTLLRKIDVVESKLLGNPLHGSVRL 836

Query: 729  NQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            +++ + +  K ++  +I+ LK ++ +++     D+LK+R RVL++LG    + +++LKGR
Sbjct: 837  DELYQKYDSKVKIETQIKALKDQILETKAVIQLDDLKHRKRVLRRLGFTTQNDIIELKGR 896

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             AC I TGDELL+TEL+FNGTFNDL   Q AAL SC +  +K+ E   L+ ELA+PL+ L
Sbjct: 897  VACEISTGDELLLTELIFNGTFNDLTPEQCAALLSCCVFQEKAKETPRLKPELAEPLKNL 956

Query: 848  QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
            QE A KIA+I  ECK+E+   +Y+ES  RP LM+V Y W K ATF ++ +MTD++EGSII
Sbjct: 957  QEMALKIAKISKECKIEMVEKDYIES-FRPELMEVTYAWCKNATFTQICKMTDVYEGSII 1015

Query: 908  RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            R+ +RL+E + Q+ +AA+ +G + LE K   A E + R I+ + SLYL
Sbjct: 1016 RTFKRLEEMIRQMVSAAKTIGNMELETKMDKALELVHRDIVSAGSLYL 1063


>gi|321468914|gb|EFX79897.1| hypothetical protein DAPPUDRAFT_304340 [Daphnia pulex]
          Length = 1034

 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/993 (48%), Positives = 665/993 (66%), Gaps = 73/993 (7%)

Query: 2    EESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVP--SGYALTKDEAIHGT 59
            E+ LM+G R A    +H   T E+            C HEVAVP  + YA  +       
Sbjct: 76   EKLLMSGPRIA----IHTLDTIEQ------------CTHEVAVPPDADYAPLRP------ 113

Query: 60   FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
                 Y+G  AK Y F LDPFQ+ ++ CL+ ++SVLVSAHTSAGKT VAEYAIAM+ ++K
Sbjct: 114  -----YSGPPAKEYPFVLDPFQKEAILCLQNSQSVLVSAHTSAGKTVVAEYAIAMSLKEK 168

Query: 120  QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
            QRVIYT+P+KALSNQKYRE  +EFKDVGLMTGDVT++P ASCL+MTTEILR MLYRGSEV
Sbjct: 169  QRVIYTTPIKALSNQKYREFSEEFKDVGLMTGDVTINPTASCLIMTTEILRSMLYRGSEV 228

Query: 180  LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
            ++EVAWV+FDEIHYM+D+ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQ
Sbjct: 229  VREVAWVVFDEIHYMRDKERGVVWEETIILLPDNVHFVFLSATIPNARQFAEWICHLHKQ 288

Query: 240  PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
            PCHVVYTD+RP PLQHY+FP GG G++LVVDEK QFREDNF    +        G   +G
Sbjct: 289  PCHVVYTDYRPVPLQHYIFP-GGEGIHLVVDEKGQFREDNF---NEAMAVLHTVGDAASG 344

Query: 300  KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
               GR      G  GS  FKI+KMIME+ F PV+VFSFS++ECE +A+ MSKLDFN+ EE
Sbjct: 345  DKRGRRGGIKGGEAGSSCFKIIKMIMEKNFSPVVVFSFSKKECEFYALQMSKLDFNSNEE 404

Query: 360  KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
            K  V +VFQNA++ L+EEDR LP +E +LPLLKRGI +HH GLLP++KE VE+LF EGL+
Sbjct: 405  KKLVGEVFQNAMEVLSEEDRKLPQVEQVLPLLKRGIGIHHGGLLPILKETVEILFAEGLI 464

Query: 420  KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
            KALFATETFAMGLNMPA+TV FT  +K+DG  +R+I SGEYIQMSGRAGRRG D++GI I
Sbjct: 465  KALFATETFAMGLNMPARTVFFTNARKFDGKENRWISSGEYIQMSGRAGRRGLDEKGIVI 524

Query: 480  IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
            +M+DE+M     +++V G+   L S F L+Y  +LNL+ R E +   E++++ SF QFQ 
Sbjct: 525  LMIDEKMSPAVGRNLVKGQADLLNSAFHLTYNMVLNLL-RVE-EINPEYMLERSFFQFQQ 582

Query: 540  EKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
              A+P + + V + E++        E +V+ Y+ ++  +A L + L   + +P+ ++ +L
Sbjct: 583  YAAIPHLVENVRQKEKDFKKFSVPQEEDVSSYYTIRQQLANLNEGLHKYLVKPQYIVPFL 642

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG------TLPS------------------ 635
             +GR++ ++  G D+GWG++V+  K+   G G       L S                  
Sbjct: 643  QAGRMVHIKNKGDDFGWGIIVDYKKENLVGKGEDSKNKDLDSSYVVSVLMYISKASTESK 702

Query: 636  ------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF 683
                         G   +VP  L LI+ +S +RL    DLRPLD R  +   +QE+  RF
Sbjct: 703  VVSALKPCGPKEEGEMRVVPCFLNLITKISSVRLYFNEDLRPLDNRMEVYKRIQEVHRRF 762

Query: 684  PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNH 742
            PQG+P L+PVKDM I+D + V++V +    E +L AH L++ ++ E   + +  K  +  
Sbjct: 763  PQGVPLLDPVKDMHIKDKDFVEMVQRSRAFEERLTAHQLHRDTKVETLCQLYHDKQGLAA 822

Query: 743  EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
            +++  K +++ ++      ELK R RVL++LG+  A  V++LKGR AC + +GDELL+TE
Sbjct: 823  QLKHAKDELKKAKSLLQMTELKCRKRVLRRLGYCTAADVIELKGRVACELSSGDELLLTE 882

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            ++FNG FN LD  Q AAL SCF+  +KS+E   L   L+ PL+Q+Q+ AR+IA++  E K
Sbjct: 883  MIFNGLFNALDVTQTAALLSCFVCDEKSNEMPKLSEALSGPLKQMQDLARRIAKVSVEAK 942

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            LE+  DEYVE   +P++MD++  W +G++F ++ +MTD+FEGSIIR  RRL+E L Q+  
Sbjct: 943  LELEEDEYVEK-FKPYMMDLVAAWCRGSSFGDICKMTDLFEGSIIRCMRRLEELLRQMVQ 1001

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A++++G   LE KF+   + ++R I+F+ SLYL
Sbjct: 1002 ASKSIGNTELENKFSEGIKLIKRDIIFAASLYL 1034


>gi|353238716|emb|CCA70654.1| probable MTR4-involved in nucleocytoplasmic transport of mRNA
            [Piriformospora indica DSM 11827]
          Length = 1010

 Score =  942 bits (2434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 499/1017 (49%), Positives = 673/1017 (66%), Gaps = 96/1017 (9%)

Query: 10   RKAPEEDLHVTGTPEEESTKKQRNLTRSC--------VHEVAVPSGYALTKDEAIHGTFA 61
            RK P+ D       +E  T+ QR +  S          H+VAVP GY      + H   +
Sbjct: 19   RKRPKLDSPKPLVLDEFETEAQREVDASAGLTGAEIVRHQVAVPPGYNYVPI-STHEPDS 77

Query: 62   NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            NP      A+TY F+LDPFQ VS+  ++RNESVLVSAHTSAGKT VAEYA+A   R KQR
Sbjct: 78   NP------ARTYPFKLDPFQEVSIHAIQRNESVLVSAHTSAGKTVVAEYAVAQCLRSKQR 131

Query: 122  VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
            VIYTSP+KALSNQKYREL ++F DVGLMTGDVTL+PNASCLVMTTEILR MLYRGSEV++
Sbjct: 132  VIYTSPIKALSNQKYRELLKDFGDVGLMTGDVTLNPNASCLVMTTEILRSMLYRGSEVVR 191

Query: 182  EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            EVAWVIFDEIHYM+D+ERGVVWEE++I LP  +  VFLSAT+ NA QFAEWI  +H+QPC
Sbjct: 192  EVAWVIFDEIHYMRDKERGVVWEETLILLPKTVHFVFLSATIPNAKQFAEWISKVHEQPC 251

Query: 242  HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
            HVVYTDFRPTPLQHY+FPVGG G+YLVV+E+ +FREDNF K     L   + G   +   
Sbjct: 252  HVVYTDFRPTPLQHYLFPVGGEGIYLVVNERSEFREDNFQKAMG--LLSDLSGEDPSSIT 309

Query: 302  SGRMAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
            SG   +G S  GG    +DI+KIVKMIM + + PVIVFSFS+R+CE +A+ M+KL+ N+ 
Sbjct: 310  SGAGRQGKSRKGGQKGVADIYKIVKMIMTKGYNPVIVFSFSKRDCESNALMMAKLELNSV 369

Query: 358  EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
            EE+D V +VF NAV  L+E+DRNLP +E +LPLL+RGI +HH GLLP++KEL+E+LFQEG
Sbjct: 370  EEQDMVSKVFTNAVSGLSEDDRNLPQVEHLLPLLRRGIGIHHGGLLPILKELIEILFQEG 429

Query: 418  LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
            L+K LFATETF++GLNMPAKTVVFT+V+K+DG   R I SGEYIQMSGRAGRRG DDRG+
Sbjct: 430  LIKVLFATETFSIGLNMPAKTVVFTSVRKFDGHDFRTISSGEYIQMSGRAGRRGLDDRGV 489

Query: 478  CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
             I+MVD++++    K MV G+   L S F LSY  ILNLM R EG  + E+++++ F QF
Sbjct: 490  VIMMVDKKLDPEAAKTMVKGEADRLDSAFHLSYNMILNLM-RVEG-VSPEYMLEHCFFQF 547

Query: 538  QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
            Q   ++P + ++++  +E   ++    E  V EY++L+  +  LEK   + IT P  +L 
Sbjct: 548  QNSASVPQLEQELALAQERYENIHVPDEESVGEYYELRKHMENLEKDFHAVITHPSHILP 607

Query: 598  YLGSGRLIKVREGGTDWGWGVVVNVVKK-PSAG-----------------VGTLPS--RG 637
            +L  GRL++++ G  D+GWGVVVN  KK P  G                 V  L S  R 
Sbjct: 608  FLQPGRLVQIKHGFLDFGWGVVVNFSKKAPPKGRILSSNDDDSNAQSQYIVDVLLSCARS 667

Query: 638  GG-----------------------YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILL 674
             G                        +VPV L  + ++S +R+ +P DLRP  +R++   
Sbjct: 668  SGADARQLDDLLPAPKDASGSASVIQVVPVLLSTVYSISHLRIHLPKDLRPEPSRETAWK 727

Query: 675  AVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL------------ 722
            AV+E++ R+P  +P L+PV++M I+D   ++L+ +++ L+ ++  HPL            
Sbjct: 728  AVREIQRRWPSSIPLLDPVENMDIKDRGFLELIEKMKILDERISQHPLALDPNLPLRYDA 787

Query: 723  --NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
               K + + +IR  +++ +V H+I QL             +ELK R RVL++LG  D   
Sbjct: 788  FAQKEEAQAKIRALRKRIQVAHDIMQL-------------EELKCRKRVLRRLGFSDPSD 834

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
            VV++KGR AC I TGDELL+TE++F G FN L   Q AAL SCF+  +KSS+Q+ L+ EL
Sbjct: 835  VVEMKGRVACEISTGDELLLTEMIFEGIFNTLSPEQCAALLSCFVFGEKSSQQVKLKEEL 894

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
            A PL+ +QE ARKIA++  E KL++   +YV +  +  LMD +  W +GA F+E+ ++TD
Sbjct: 895  ASPLRSMQEIARKIAKVSKESKLDIVEADYV-AQFKVELMDAVMQWCRGAKFSEICKLTD 953

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
             FEG+IIR+ RRL E + Q+ AAA+A+G  +LEKKF  +   L R   ++F +SLYL
Sbjct: 954  QFEGTIIRAFRRLQELIRQMTAAAKAIGNSDLEKKFIDSLALLERQNSVIFCSSLYL 1010


>gi|427780069|gb|JAA55486.1| Putative cytoplasmic exosomal rna helicase ski2 dead-box
           superfamily [Rhipicephalus pulchellus]
          Length = 931

 Score =  939 bits (2428), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/904 (51%), Positives = 640/904 (70%), Gaps = 42/904 (4%)

Query: 87  CLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDV 146
           CLE N+SVLVSAHTSAGKT VAEYAI++AF++KQRVIYT+P+KALSNQK+RE   +F DV
Sbjct: 35  CLEHNQSVLVSAHTSAGKTVVAEYAISLAFQEKQRVIYTTPIKALSNQKFREFTDDFTDV 94

Query: 147 GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEES 206
           GLMTGDVT++P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+
Sbjct: 95  GLMTGDVTINPSASCLIMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEET 154

Query: 207 IIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLY 266
           II LP  ++ VFLSAT+ NA QFAEWICHLHKQPCHVVYT++RP PLQHY+FP GGSGLY
Sbjct: 155 IILLPDNVRYVFLSATIPNAKQFAEWICHLHKQPCHVVYTEYRPVPLQHYIFPAGGSGLY 214

Query: 267 LVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIME 326
           LVVDE   F+ED F    +     +  G    G ++ +  KGG   G S+ +KIVKMIME
Sbjct: 215 LVVDESGNFKEDKF---NEAMALLQNAGDAAKGDSALKGRKGGF-KGESNCYKIVKMIME 270

Query: 327 RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
           R + PVIVFSFS++ECE +A  +++LD  T +EK  V +VFQNA+D L+EED+ LP +E 
Sbjct: 271 RDYAPVIVFSFSKKECEAYATQIARLDLTTFKEKKLVMEVFQNAMDSLSEEDQKLPQVEQ 330

Query: 387 MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
           +LPLLKRGIAVHHSGLLP++KE +E+LF EGLVKALFATETFAMGLNMPA+TV+FT  +K
Sbjct: 331 VLPLLKRGIAVHHSGLLPILKETIEILFAEGLVKALFATETFAMGLNMPARTVLFTNARK 390

Query: 447 WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
           +DG   R++ SGEYIQMSGRAGRRG DDRGI I+MVDE+M     KD+V G P P+ S F
Sbjct: 391 FDGKDFRWVTSGEYIQMSGRAGRRGLDDRGIVILMVDEKMSPAAGKDIVKGLPDPINSAF 450

Query: 507 RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
            L+Y  +LNLM R E +   E++++ SF QFQ   ++P   +K+ KL+ E  S     E 
Sbjct: 451 HLTYNMVLNLM-RVE-EVNPEYILERSFFQFQNNASIPVHYQKLQKLQAELDSFKIPNEP 508

Query: 567 EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK- 625
           EVA Y+K++  +A L ++L + +T+P+  + YL  GR++ +  G  D+GWGVVV   KK 
Sbjct: 509 EVAAYYKVRQQLASLSRELQAFLTKPQYCVPYLQPGRMVHINTGTDDFGWGVVVAYSKKK 568

Query: 626 ------------PSAGVGTLPS---------------------RGGGYIVPVQLPLISTL 652
                       P   V  L +                     +G   +VP+ +  I+ +
Sbjct: 569 VVTARGQSGLKDPVVIVDVLLNVSKESAQTKLTSKLTPPKPGEKGEVQVVPLTIDNITKM 628

Query: 653 SKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEE 712
           S IRL    DL+  D R ++L +++E+E RFP+G+P ++P +D+ I+D  + ++V +IE 
Sbjct: 629 SSIRLFYNQDLKSSDNRAAVLKSIKEVEERFPKGVPLVDPFEDLNIKDANMKEVVKKIEA 688

Query: 713 LEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
            E++++AHP++   +  +I   +++K +V  EI+++K++++ ++     +ELK R RVL+
Sbjct: 689 FENRMYAHPMHSHPELPKIYAEYEKKMKVVQEIREVKNELKKAKALLQMEELKCRKRVLR 748

Query: 772 KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS 831
           +LG+  A  V+++KG+ AC + + DELLVTE++FN  FN+L+ HQ  AL SC +  +KS+
Sbjct: 749 RLGYATASDVMEIKGKVACEVSSADELLVTEMIFNNMFNELNAHQATALLSCLVFQEKSN 808

Query: 832 EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGAT 891
           E  NL  EL+ PL+Q+Q+ AR+IA +  + KL ++ D YV S+ +P LMDVIY WSKGA+
Sbjct: 809 EMPNLTEELSGPLRQMQDIARRIARVTKDAKLCIDEDTYV-SSFKPHLMDVIYAWSKGAS 867

Query: 892 FAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
           FA V +MTD+FEGSIIR  RRL+E L Q+  AA+ +G   LE KF+ A + ++R I+F+ 
Sbjct: 868 FAHVCRMTDVFEGSIIRCMRRLEELLRQIVQAAKCIGNTELENKFSEAIKLMKRDIVFAA 927

Query: 952 SLYL 955
           SLYL
Sbjct: 928 SLYL 931


>gi|195398015|ref|XP_002057620.1| GJ18233 [Drosophila virilis]
 gi|194141274|gb|EDW57693.1| GJ18233 [Drosophila virilis]
          Length = 1069

 Score =  937 bits (2423), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/954 (49%), Positives = 646/954 (67%), Gaps = 54/954 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNESV 94
            SC HEVA     A    E I      P+  + G  AK Y F LDPFQ+ ++ C++ ++SV
Sbjct: 135  SCTHEVA-----AHPDQEYI------PLQPFTGVPAKEYPFVLDPFQKQAILCIDNSQSV 183

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EF+DVGL+TGDVT
Sbjct: 184  LVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFQDVGLVTGDVT 243

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P+ASCL+MTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ERGVVWEE++I LP  +
Sbjct: 244  INPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNV 303

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            + VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK Q
Sbjct: 304  RYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQ 363

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG---GSGSGGSDIFKIVKMIMERKFQP 331
            F+EDNF             G    G   GR  KG   G  SG ++IFKIVKMIMER F P
Sbjct: 364  FKEDNFTTAMAVLAN---AGEAAKGDQKGR--KGGVKGHNSGQTNIFKIVKMIMERHFAP 418

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VI+FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L+EEDR LP +E +LPLL
Sbjct: 419  VIIFSFSKKDCEVYAMQMAKLDFNTIDEKKLVDEVFNNAMDVLSEEDRRLPQVENVLPLL 478

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG  
Sbjct: 479  RRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKD 538

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +++V GK   L S F L+Y 
Sbjct: 539  FRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPVVGREIVQGKADTLNSAFHLTYN 598

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +LNL+ R E +   E++++ SF+QFQ + ALP +  +V +  ++   L    E  +A Y
Sbjct: 599  MVLNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVQQKTQQLEKLTVKDEHNIASY 656

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK------- 624
            H ++  +     K    +T+P+ ++ +L  GRL+KV  G  ++ WG+V+N  K       
Sbjct: 657  HHIREQLELNGNKFREWLTKPQYLVPFLQPGRLVKVSAGKQEYDWGLVLNFKKQEQNRKN 716

Query: 625  --KPSAGV----------------GTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPD 662
              K   GV                 T P     RG   +VPV   LI+ +S IR+  P D
Sbjct: 717  PLKSETGVVIDMLLHVSEEAAKTGDTEPCKPNERGCMEVVPVANTLITQISSIRVYFPND 776

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            LR  D R+++L  +QE + RFP G P L+P+ DM I+DPE   +V+ I + E  L  HPL
Sbjct: 777  LRTADNRRAVLKTIQEAKKRFPLGPPVLHPIDDMNIKDPEFRQIVDTIAQFESLLEEHPL 836

Query: 723  NKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            +KS +  ++ + +  K ++  E+  LK++++ ++     DELK R RVL+++G+     V
Sbjct: 837  HKSPELERVHKRYIEKLKLQSELNGLKAELKAARSLLQMDELKYRKRVLRRMGYCKPGDV 896

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            ++ KGR AC + + DELL+TE++FNG FN+L   Q  AL SCF+  +KSSE      EL+
Sbjct: 897  IEFKGRVACELSSADELLITEMIFNGVFNELSAPQAVALLSCFVCDEKSSESPKSATELS 956

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             PL+ LQ  AR+IA++  ECKL ++ + YV+   +PFLMDV+  W KG++F  V +MTDI
Sbjct: 957  GPLRSLQSLARRIAKVSTECKLSLDEENYVDK-FKPFLMDVVLAWCKGSSFLSVCKMTDI 1015

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            FEGSIIR  RRL+E L QL  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1016 FEGSIIRCMRRLEELLRQLCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1069


>gi|328353048|emb|CCA39446.1| ATP-dependent RNA helicase DOB1 [Komagataella pastoris CBS 7435]
          Length = 1064

 Score =  937 bits (2422), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/967 (49%), Positives = 650/967 (67%), Gaps = 68/967 (7%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLERNESVLV 96
            H+VA+P+ Y  T           P+   E    A+TY F LDPFQ  S++C++RNESVLV
Sbjct: 115  HQVALPTDYKYT-----------PIGQHERTNEARTYPFTLDPFQDTSISCIDRNESVLV 163

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  EF DVGLMTGDVT++
Sbjct: 164  SAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTIN 223

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ RGVVWEE+II LP  +  
Sbjct: 224  PDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKARGVVWEETIILLPDKVHY 283

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FAEWIC +H QPCHVVYTDFRPTPLQHY+FP GG G++LVVDEK  FR
Sbjct: 284  VFLSATIPNAMEFAEWICTIHSQPCHVVYTDFRPTPLQHYLFPAGGDGIHLVVDEKSNFR 343

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG-----SDIFKIVKMIMERKFQP 331
            E+NF K   T +  K G   ++G  +G+  KG S  GG     SDI+KIVKMI  +K+ P
Sbjct: 344  EENFQKAMST-ISDKSG--EDSGAVNGKGKKGESFKGGPNNSKSDIYKIVKMIWIKKYNP 400

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VIVFSFS+R+CE  A+ MSKLDFNT EE+  + ++F+NA+  L + D++LP I+ +LPLL
Sbjct: 401  VIVFSFSKRDCESLALKMSKLDFNTDEERTALTKIFENAIGLLPDADKDLPQIKHILPLL 460

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+KWDG  
Sbjct: 461  RRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGKG 520

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y 
Sbjct: 521  FRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYN 580

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             ILNLM R EG  + E +++ SF+QFQ   ++P +  K++ LE + A++    E  + EY
Sbjct: 581  MILNLM-RVEG-ISPEFMLQQSFYQFQNAASIPHLENKLALLESQEATIQIEDEGTIKEY 638

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV------------ 619
            + ++  +    K +   IT P  +L +L  GR IKV+ G  ++ WGVV            
Sbjct: 639  YDIRQQLETYRKDMKFIITHPANLLQFLQPGRAIKVKVGEFNYDWGVVIECQKRTTKTGP 698

Query: 620  ------------------------VNVVK--KPSAGVGTLPSRGG----GYIVPVQLPLI 649
                                    VN++K   P    G  P+RG     G I+P+ L  I
Sbjct: 699  AKTFSDHESYIVNVFVNTMFVDSPVNLIKPFNPVFPEGIRPARGDEATKGEIIPITLDSI 758

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
              +S IR+ +P D     A++++   + EL+ R+P G+P L+P+++M I D +   L+ +
Sbjct: 759  QDISNIRMYIPKDYHSTQAKKTLNKTIVELKRRYPDGVPLLDPIENMGISDDDFKVLIRK 818

Query: 710  IEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            IE LE KL ++ L  +    ++   +  K     EI+++K+K+ ++Q     D+LK+R R
Sbjct: 819  IEVLETKLASNALTGTDKLAELYNVYSTKVSKQEEIKKIKAKLLETQAVIQLDDLKHRKR 878

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++L       +++LKGR AC I TGDELL+TEL+FNGTFNDLD +Q A++ SCF+  +
Sbjct: 879  VLRRLQFTTQQDIIELKGRVACEISTGDELLLTELIFNGTFNDLDVYQCASILSCFVFEE 938

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            ++ E   LR ELA+PL+ LQ+ A KIA++  E K+++   EYVES   P LM+V+Y W K
Sbjct: 939  RTKEIPRLRPELAEPLKALQDMASKIAKVSRESKIDLVEKEYVES-FNPGLMEVVYAWCK 997

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            GA F+++ +MTD++EGS+IR  +RL+E + Q+  AA+ +G   L+ K   A ES+ R I+
Sbjct: 998  GAAFSQICKMTDVYEGSLIRMFKRLEEMIRQMVTAAKTIGNEALQTKMEEAIESVHRDIV 1057

Query: 949  FSNSLYL 955
             + SLYL
Sbjct: 1058 SAGSLYL 1064


>gi|150866387|ref|XP_001385966.2| Dead-box family helicase required for mRNA export from nucleus
            [Scheffersomyces stipitis CBS 6054]
 gi|149387643|gb|ABN67937.2| Dead-box family helicase required for mRNA export from nucleus
            [Scheffersomyces stipitis CBS 6054]
          Length = 1068

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/966 (49%), Positives = 654/966 (67%), Gaps = 67/966 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEM-----AKTYSFELDPFQRVSVACLERNESV 94
            H+VA+P  Y              P+  GE      A+TY F LDPFQ  +++C++R+ESV
Sbjct: 120  HQVAIPPDYPYV-----------PI--GEHKRQKEARTYPFILDPFQDTAISCIDRDESV 166

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYREL  EF DVGLMTGDVT
Sbjct: 167  LVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVT 226

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P+A CLVMTTEILR MLYRGSE+++EVAWVIFDE+HYM+D+ RGVVWEE+II LP  +
Sbjct: 227  INPDAGCLVMTTEILRSMLYRGSEIMREVAWVIFDEVHYMRDKSRGVVWEETIILLPDKV 286

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA +FAEWI  +H QPCHVVYTDFRPTPLQHY+FP  G G++LVVDEK  
Sbjct: 287  HHVFLSATIPNAMEFAEWIVKIHAQPCHVVYTDFRPTPLQHYLFPAAGDGIHLVVDEKGT 346

Query: 275  FREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ 330
            FRE+NF K    + D        G +  GK  G+  KGG+  G SDI+KIVKMI  +++ 
Sbjct: 347  FREENFQKAMASISDAGGDDPASGDKSKGK-KGQTYKGGNKDGKSDIYKIVKMIYMKRYN 405

Query: 331  PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
            PVIVFSFS+R+CE  A+ MSKLDFN  +E+D + ++F NA++ L E D+ LP I+ +LPL
Sbjct: 406  PVIVFSFSKRDCESLALKMSKLDFNNDDERDALTKIFNNAINLLPEADKELPQIKNILPL 465

Query: 391  LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
            LKRGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+KWDG 
Sbjct: 466  LKRGIGIHHSGLLPILKEIIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTSVRKWDGV 525

Query: 451  SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
              R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y
Sbjct: 526  GFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGY 585

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE 570
              ILNLM R EG  + E +++NSF+QFQ   ++P + K +  L  +  +++   EA V E
Sbjct: 586  NMILNLM-RVEG-ISPEFMLENSFYQFQNAASVPVMEKTLQDLTLKYNTIEVDDEATVKE 643

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV----------- 619
            Y+ LK  + + ++ +   IT P  +L +L  GR+IKV+ G  D+GWG+V           
Sbjct: 644  YYDLKKQLDKYQEDVRKVITHPGYILPFLQEGRVIKVKIGDQDYGWGMVTSFSKRNNKRN 703

Query: 620  -----------------------VNVVK--KPSAGVGTLPSRGGGY----IVPVQLPLIS 650
                                   VN++K   P    G  P++ G       +P+ L  I 
Sbjct: 704  QSFTDYETYIVNVFVYTMFVDSPVNLIKPLNPMLPEGIRPAKAGEKSRVEYIPITLDSIE 763

Query: 651  TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
             +S +RL VP DL+   +++++L  +++L  R P G+P ++PV++MKI D +   L+ +I
Sbjct: 764  KISSVRLRVPEDLKSSASKKTLLKTMKDLPKRLPDGIPLMDPVENMKITDQDFQMLLKKI 823

Query: 711  EELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
            + L+ KL ++PL N ++ ++    +  K ++  +I+ LK K+ ++Q     D+L++R RV
Sbjct: 824  DVLDSKLISNPLYNSARLKDLYENYSEKEQIQEKIKNLKEKVLEAQAVIQLDDLRHRKRV 883

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            L++L  +  + +++LKGR AC I +GDELL+TEL+FNGTFNDL   Q AAL SCF+  ++
Sbjct: 884  LRRLDFVTQNDIIELKGRVACEISSGDELLLTELIFNGTFNDLTCEQCAALLSCFVFQER 943

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            + E   L+ ELA+PL+ +Q+ A KIA++  E K+E+   +YVES  RP LM+V Y W KG
Sbjct: 944  AKETPRLKPELAEPLKSMQDMASKIAKVTKESKIEIIEKDYVES-FRPELMEVTYAWCKG 1002

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            A+F ++ +MTD++EGS+IR+ +RL+E + QL  AA+ +G  +LE+K     E + R I+ 
Sbjct: 1003 ASFTQICKMTDVYEGSLIRTFKRLEELIRQLVQAAKTIGNTDLEEKMEKTIELVHRDIVS 1062

Query: 950  SNSLYL 955
            + SLYL
Sbjct: 1063 AGSLYL 1068


>gi|357507885|ref|XP_003624231.1| Helicase, putative [Medicago truncatula]
 gi|355499246|gb|AES80449.1| Helicase, putative [Medicago truncatula]
          Length = 983

 Score =  937 bits (2421), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/997 (48%), Positives = 659/997 (66%), Gaps = 68/997 (6%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGE 68
           KRK+P       G  E   + + +     CVH+V+ P GY      +   +   P     
Sbjct: 5   KRKSP------PGEEEPSPSHQAQQPLHDCVHDVSYPHGYVHPPPSSSSSSTKEP----- 53

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            AKT+ F LDPFQ  S+ CLE +ESV+VSAHTSAGKT VA YAIAM+ R+KQRVIYTSP+
Sbjct: 54  -AKTFPFTLDPFQSQSITCLENSESVMVSAHTSAGKTVVALYAIAMSLRNKQRVIYTSPI 112

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYRE  +EF DVGLMTGDVT+ PNASCLVMTTEI R M Y+GSEV +EVAW+IF
Sbjct: 113 KALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSEVTREVAWIIF 172

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +H+QPCH+VYTD+
Sbjct: 173 DEVHYMRDRERGVVWEESIVMSPKNARFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDY 232

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RPTPLQHY+FP G  GLYLVVDEK +FRED+F K  +  +    G R+   K + +  KG
Sbjct: 233 RPTPLQHYIFPSGSEGLYLVVDEKGKFREDSFQKALNALIPAADGDRK---KENAKWQKG 289

Query: 309 ---GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
              G  +  SDIFK+VKMI++R++ PVI+FSFS+RECE  AM M+K+D N   EKD +E+
Sbjct: 290 LVLGKAAEESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGDIEKDNIEK 349

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
           +F  A+D L+++D+ LP +  MLPLLKRGI VHHSGLLP++KE++E+LFQEGL+K LFAT
Sbjct: 350 IFWCAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFAT 409

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ETF++GLNMPAKTVVFT V+K+DGD  R+I SGEYIQMSGRAGRRG DDRG+CI+MVDE+
Sbjct: 410 ETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGIDDRGVCILMVDEK 469

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           ME +T K+MV G    L S F LSY  ILN M   +G    E++++NSF QFQ ++A+PD
Sbjct: 470 MEPSTAKNMVKGAADSLNSAFHLSYNMILNQMRCEDGD--PENLLRNSFFQFQADRAIPD 527

Query: 546 IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
           + K++  LEEE  S+    E  + +Y+ L      L K++   +  P   L YL  GRL+
Sbjct: 528 LEKQIKTLEEERESIVIDEEDSLKDYYNLLEQHRSLNKEVHDIVISPRHCLPYLQPGRLV 587

Query: 606 KVREGGTD-----------WGWGVVVN-----------------------------VVKK 625
            ++   ++             WG+++N                             VV K
Sbjct: 588 SLQCTSSEEDLVPIFIEDQLTWGLIINFERIKGVSEDDANIKPEDASYKVDILTRCVVTK 647

Query: 626 PSAG-----VGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
              G     +  L  RG   +V + +  ++ +S +RL +P DL PL+AR++ L  V E  
Sbjct: 648 DKLGKKSVEIVPLKERGEPIVVSIPISQVNAISSLRLYIPKDLLPLEARENTLKKVMETL 707

Query: 681 SRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKA 738
           SRF + GLP L+P +DMKI+         +IE LE     H + KS   + +++ FQRK 
Sbjct: 708 SRFSEKGLPLLDPEEDMKIQSNSYKKASRRIEALERLFERHEIAKSPLIKQKLKVFQRKQ 767

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
           E+  +I+ +K  +R S    F+DELK R RVL++LG+  +D VV LKG+ AC I + DEL
Sbjct: 768 ELTAKIKSIKKTLRSSTTLAFKDELKARKRVLRRLGYATSDNVVDLKGKVACEISSADEL 827

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            +TELMFNG F D+   ++ +L SCF+  +K ++    R EL     QLQ++AR++A++Q
Sbjct: 828 TLTELMFNGVFKDIKVEEMISLLSCFVWREKINDAAKPREELDLLYAQLQDTARRVAQLQ 887

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
            ECK++++V+ +V+S  RP +M+V+Y W+KG+ F E++++T +FEGS+IRS RRL+E L 
Sbjct: 888 LECKVQIDVETFVKS-FRPDIMEVVYAWAKGSKFYEIMEITQVFEGSLIRSIRRLEEVLQ 946

Query: 919 QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           QL  AA+++GE+ LE KF  A   ++R I+F+ SLYL
Sbjct: 947 QLIEAAKSIGEIELEAKFEEAVSKIKRDIVFAASLYL 983


>gi|326436235|gb|EGD81805.1| DEAD/DEAH box helicase [Salpingoeca sp. ATCC 50818]
          Length = 1034

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/954 (50%), Positives = 640/954 (67%), Gaps = 54/954 (5%)

Query: 35   TRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
            ++ C+HEVA+P G+  T        F       + AKTY F LDPFQRVSV CLERNESV
Sbjct: 102  SKDCLHEVAIPPGHEYT-------PFDETPAPEKPAKTYPFTLDPFQRVSVQCLERNESV 154

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIAM+ RD QRVIYTSP+KALSNQKYREL +EFKDVGLMTGD T
Sbjct: 155  LVSAHTSAGKTVVAEYAIAMSLRDGQRVIYTSPIKALSNQKYRELAEEFKDVGLMTGDTT 214

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P+ASCLVMTTEILR MLYRGSE+++EV WV+FDEIHYM+D  RGVVWEE++I LP  +
Sbjct: 215  INPSASCLVMTTEILRSMLYRGSEIMREVGWVVFDEIHYMRDANRGVVWEETLILLPDNV 274

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA QFA+WI H+H QPCHVVYTD+RPTPLQHY++P G  GLYL+V     
Sbjct: 275  HYVFLSATIPNALQFAQWISHIHNQPCHVVYTDYRPTPLQHYIYPSGAEGLYLIVGPDGG 334

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            FR+DNF K        +I G    G+A GR        G S+I  IV MIM+RK  P IV
Sbjct: 335  FRDDNFTK---AMASMQISGAANKGRAKGR------SKGQSNISAIVGMIMKRKLHPCIV 385

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS+RECE +AM +SKLDFNT++EK  +E +F NA+  L+EEDR LP+IE +LPL+KRG
Sbjct: 386  FSFSKRECETYAMDLSKLDFNTEDEKKNIELIFTNAIASLSEEDRALPSIENLLPLMKRG 445

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            + VHHSGLLP++KE+ ELLF EGLVK LFATETFAMGLNMPAKTVVF+ VKK+DG   R 
Sbjct: 446  VGVHHSGLLPIMKEVTELLFGEGLVKVLFATETFAMGLNMPAKTVVFSNVKKFDGKEFRP 505

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            + SGEYIQMSGRAGRRG D  GI I+M+ E++E    K M+ G+   L S FRL+Y  +L
Sbjct: 506  LSSGEYIQMSGRAGRRGLDTNGIVILMMQEKLEPQNAKGMLQGQADKLNSAFRLTYNMVL 565

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NL+ R E +   E+++  SF++FQ  + +P + K+V +L  E        E EV  YH L
Sbjct: 566  NLL-RVE-EINPEYMLNKSFYKFQNTQDIPAMRKRVEELAAEHKRFTVDREDEVEMYHTL 623

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV-KKPSAGVG-- 631
                  LE KL + IT  + +L YL  GRL+ V++   DWGWG VVN   KKP    G  
Sbjct: 624  VTSKDTLEGKLSTAITETKHILRYLNPGRLVHVQDSQQDWGWGAVVNFQRKKPQQLPGQA 683

Query: 632  --------------------------TLPSRGGG--YIVPVQLPLISTLSKIRLSVPPDL 663
                                        P+ G G   ++PV L  I  LS++ + +P  +
Sbjct: 684  QQTKEVVIVDVLLNCDATVVKGDKPRPCPANGSGDPQVIPVVLGAIKGLSRLCMRLPRSI 743

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            +P D R+ +   ++E   R  +G   L+PVK+MKI+D  +V L +QI++L  ++  HPL+
Sbjct: 744  KPADERKRLYKNIRETLRR--KGPCPLHPVKEMKIQDEAIVHLCSQIDDLHQRIETHPLH 801

Query: 724  KSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            K ++ E+ +  F++K ++  E+   K +++ S+  +  DELK+R RVL++L     D V+
Sbjct: 802  KDENRESLLALFRKKRDIYEELLATKRQLKMSESIQQLDELKSRKRVLRRLKFCTDDDVI 861

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN-LRMELA 841
            ++KGR AC I+TGDELL+TE++FNG FNDL   QV +L SCF+      E  + ++ EL+
Sbjct: 862  EMKGRVACEINTGDELLITEMIFNGVFNDLSVVQVVSLMSCFVASPTKDETPSKMKEELS 921

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             P +Q+QE AR+IA++  E ++ ++ +EYV S   P +MD++  W  GA F+++ ++T +
Sbjct: 922  GPFKQMQEMARRIAKVSIESRITLDEEEYV-SQFAPDMMDIVNQWCCGARFSDICKITTM 980

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +EGSIIRS RRL+E L Q+ AAA+A+G   LE KFA     ++R I+F+NSLYL
Sbjct: 981  YEGSIIRSMRRLEELLRQMAAAAKAIGNSELEHKFAEGMSLIKRDIVFANSLYL 1034


>gi|356527455|ref|XP_003532326.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Glycine
           max]
          Length = 981

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/997 (48%), Positives = 663/997 (66%), Gaps = 70/997 (7%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNG- 67
           KRK+PEE    T  P              CVH V+ P GY       +H + ++P +   
Sbjct: 5   KRKSPEEPSSSTLQP-----------LHDCVHHVSYPDGY-----NNVHASSSSPTHTTT 48

Query: 68  -EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            E AK + F LDPFQ  S++CLE  ESV+VSAHTSAGKT VA YAIAM+ R+ QRV+YTS
Sbjct: 49  SEPAKNFPFPLDPFQSKSISCLENGESVMVSAHTSAGKTVVALYAIAMSLRNGQRVVYTS 108

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKYRE  +EF DVGLMTGDVT+ PNASCLVMTTEI R M Y+GSE+ +EVAW+
Sbjct: 109 PIKALSNQKYREFKEEFSDVGLMTGDVTIDPNASCLVMTTEIWRSMQYKGSELTREVAWI 168

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           +FDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +H+QPCHVVYT
Sbjct: 169 VFDEVHYMRDRERGVVWEESIVLSPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHVVYT 228

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG-RRENGKASGRM 305
           D+RPTPLQHY+FP GG GLYLVVDEK +FRED+F K  +  +    G  ++ENGK    +
Sbjct: 229 DYRPTPLQHYLFPSGGDGLYLVVDEKGKFREDSFQKSLNALIPATEGDKKKENGKWQKGL 288

Query: 306 AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
             G SG   SDIFK+VKMI++R++ PVI+FSFS+RECE  AM M+K+D N   EKD +EQ
Sbjct: 289 VLGRSGE-ESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNGDNEKDNIEQ 347

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
           +F +A+D L+++D+ LP +  MLPLLKRGI VHHSGLLP++KE++E+LFQEGL+K LFAT
Sbjct: 348 IFCSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFAT 407

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ETF++GLNMPAKTVVFT V+K+DGD  R+I SGEYIQMSGRAGRRG D+RGICI+MVDE+
Sbjct: 408 ETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGIDERGICILMVDEK 467

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           ME +T K+MV G    L S F LSY  ILN M   +G    E++++NSF QFQ ++A+PD
Sbjct: 468 MEPSTAKNMVKGAADSLNSAFHLSYNMILNQMRCEDGD--PENLLRNSFFQFQADRAIPD 525

Query: 546 IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
           + K++  LEEE  S+    E+ + +Y  L      L K++   +  P   L +L  GRL+
Sbjct: 526 LEKQIKSLEEERESIVIEEESSLKDYFNLLEQHRALNKEIRDIVLSPRHCLPFLQPGRLV 585

Query: 606 KVREGGTD-----------WGWGVVVN-----------------------------VVKK 625
            +    +D             WG+V+N                             VV+K
Sbjct: 586 SLECTSSDEDLPLIFIEDQLTWGLVINFERVKSVSEDDASIKPEDASYIVDVLTRCVVRK 645

Query: 626 PSAG---VGTLPSRGGGYIVPVQLPL--ISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
              G   +  +P +  G  + V +P+  I+T+S +RL +P DL PL+AR++ L  V E  
Sbjct: 646 DKIGKKSIKIVPLKEVGEPLVVSVPISQINTISSLRLYIPKDLLPLEARENTLKKVLETL 705

Query: 681 SRF-PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKA 738
           +RF  +GLP L+P +DMKI+         +IE LE     H + KS   + +++ FQRK 
Sbjct: 706 TRFGEKGLPLLDPEEDMKIQSSSYKKASRRIEALESLFEKHEIAKSPLIKQKLKVFQRKQ 765

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
           E+  +I+ +K  +R S    F+DELK R RVL++LG+  +D VV+LKGR AC I + DEL
Sbjct: 766 ELTAKIKSIKKALRSSSALAFKDELKARKRVLRRLGYATSDNVVELKGRVACEISSADEL 825

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            +TELMFNG   D+   ++ +L SCF+  +K  +    R EL     QLQ++AR++A++Q
Sbjct: 826 TLTELMFNGVLKDIKVEEMVSLLSCFVWQEKIHDAAKPREELDFLFMQLQDTARRVAQLQ 885

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
            ECK+E++V+ +V+S  RP +M+ +Y W+KG+ F E++++T +FEGS+IR+ RRL+E L 
Sbjct: 886 LECKVEIDVESFVKS-FRPDIMEAVYAWAKGSKFYEIMEITQVFEGSLIRAIRRLEEVLQ 944

Query: 919 QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           QL  AA+++GE  LE KF  A   ++R I+F+ SLYL
Sbjct: 945 QLIEAAKSIGETQLEAKFEEAVSKIKRDIVFAASLYL 981


>gi|66819831|ref|XP_643574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
 gi|60471611|gb|EAL69567.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
          Length = 1128

 Score =  934 bits (2414), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/967 (47%), Positives = 653/967 (67%), Gaps = 59/967 (6%)

Query: 35   TRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
            ++SC+HEV +P G  +  D  ++    NP    + A+TY F+LDPFQ  S+AC+ERNESV
Sbjct: 175  SKSCIHEVLLPPG-EVNDDPNLY----NPPEPIKPARTYPFKLDPFQATSIACIERNESV 229

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEY+IA A RD QRVIYTSP+KALSNQK+R+L + F+DVGLMTGD+T
Sbjct: 230  LVSAHTSAGKTVVAEYSIATALRDGQRVIYTSPIKALSNQKFRDLQETFQDVGLMTGDIT 289

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++ NASCLVMTTEILR MLYRGSE ++EV+WVIFDEIHY++D+ERGVVWEE+II LP ++
Sbjct: 290  INANASCLVMTTEILRSMLYRGSETMREVSWVIFDEIHYLRDKERGVVWEETIILLPDSV 349

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            K VFLSAT+ NA +FA WI  +HKQPCHVVYT++RP PLQHY+FP GG GL+LVVDE   
Sbjct: 350  KFVFLSATIPNAREFAAWIAKIHKQPCHVVYTEYRPIPLQHYIFPSGGDGLHLVVDENGV 409

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            FRE+NF+K      + ++G     G++     +GG   G SD +KIVKMIMER +QPVI+
Sbjct: 410  FREENFLKSLSNLQQPEMG-----GQSGASRKRGGGNKGPSDCYKIVKMIMERNYQPVII 464

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS++ECE +A+ MSKLDFN  +EK+ VE +F NA+D L+E D+ LPA+  +LPLLKRG
Sbjct: 465  FSFSKKECETYALQMSKLDFNNDDEKNAVETIFNNAIDSLSESDKQLPAVINILPLLKRG 524

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HH+GLLP++KE++E+LFQ G +KALFATETF++GLNMPAKTV+FT+V+K+DG+  R+
Sbjct: 525  IGIHHAGLLPILKEIIEILFQYGYIKALFATETFSIGLNMPAKTVIFTSVRKFDGEGMRW 584

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            I  GEYIQMSGRAGRRG D+RGI I+MVDE+ME    K MV G+   L S+F + Y  +L
Sbjct: 585  ISGGEYIQMSGRAGRRGLDERGIVILMVDEKMEPAIAKGMVKGQADRLTSSFWIGYSMLL 644

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            N++ R E     E+++K SFHQ+Q E  +P +  K  ++E+E   +    E  V EY  +
Sbjct: 645  NML-RVE-DIDPENLLKRSFHQYQQESFIPQLVDKCDQMEQEKKEIIIRDETSVTEYSSI 702

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--SAGVG- 631
            K  +A+L + +   I +P  V  +L +GR++++REG TDWG+GV++N  K+P  S+G G 
Sbjct: 703  KAQLAKLREAMRDFINQPTYVQPFLTAGRIVRIREGSTDWGYGVILNFSKRPIKSSGSGV 762

Query: 632  ------------------TLPSRGGGY----------------IVPVQLPLISTLSKIRL 657
                              + P+  GGY                I+PV + L   ++ + L
Sbjct: 763  SDKSFEVIADILLECAISSDPTSNGGYIGTPKPCVPGEVGEGQIIPVSIKLFDGITSVCL 822

Query: 658  SVPPDLRPLDARQSILLAVQELESRFPQ--GLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
             V  +    + +  +   ++E E+RF +  G+P ++P++DMKI+DP    L+ +IE LE 
Sbjct: 823  YVKKEQPTQEFKTHLFKTLKETENRFKKDGGIPLIDPIEDMKIKDPNFKKLIKKIETLES 882

Query: 716  KLFAHP-LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
            +  +    N +  E +    ++K E+  EI+QL+ +++       +D+L++  R+L +LG
Sbjct: 883  RFSSTACFNDTDIEERCNLLEKKNEITKEIKQLQKQIKSGDEVILKDDLRSMKRILTRLG 942

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
            +I  DGVV LKGR AC I  GDEL+++EL+F G FNDL   Q  A+ SCF+  ++ S   
Sbjct: 943  YITDDGVVALKGRVACEISAGDELVISELLFAGLFNDLSVEQCVAVFSCFVFQNEGSANN 1002

Query: 835  NLRMELAKP-----LQQLQESARKIAEIQNECKLEVNVDEYVE-STVRPFLMDVIYCWSK 888
            ++     KP      + ++++A K+  +  ECKL  +VDE    ++  P  MDV + W+ 
Sbjct: 1003 DVNNPKIKPDLVPLYRVIRDTASKVVTVSQECKL-TSVDEKTYLASFNPNFMDVTFAWAS 1061

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            GA+FA++++MTD FEG++IR  RRLDE + Q+  A++++G   LE KF+ A+  ++R I 
Sbjct: 1062 GASFADIVKMTDTFEGNLIRGIRRLDELIRQMVIASKSIGNTELEAKFSEATVKIKRDIP 1121

Query: 949  FSNSLYL 955
            F+ SLYL
Sbjct: 1122 FAGSLYL 1128


>gi|164658239|ref|XP_001730245.1| hypothetical protein MGL_2627 [Malassezia globosa CBS 7966]
 gi|159104140|gb|EDP43031.1| hypothetical protein MGL_2627 [Malassezia globosa CBS 7966]
          Length = 1046

 Score =  934 bits (2413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/987 (50%), Positives = 646/987 (65%), Gaps = 87/987 (8%)

Query: 33   NLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
             L+ S  H+VA+P+GY        +   +  V     ++++ FELDPFQR SV C+ER+E
Sbjct: 83   QLSHSVRHQVAIPAGYD-------YLPLSKHVPRDPPSRSWPFELDPFQRTSVYCIERSE 135

Query: 93   SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGD 152
            SVLVSAHTSAGKT VAEYAIA A RD QRV+YTSP+KALSNQKYRE   EF DVGLMTGD
Sbjct: 136  SVLVSAHTSAGKTIVAEYAIAQALRDGQRVVYTSPIKALSNQKYREFSAEFGDVGLMTGD 195

Query: 153  VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
            VT++P+ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+II LP 
Sbjct: 196  VTINPSASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEETIILLPR 255

Query: 213  AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
             +  VFLSAT+ NA QFAEWI H+H QPCHVVYTDFRPTPLQHY+FP GG G++LVVDEK
Sbjct: 256  KVHYVFLSATIPNAMQFAEWIAHIHAQPCHVVYTDFRPTPLQHYLFPEGGQGIHLVVDEK 315

Query: 273  EQFREDNFVKLQDTF--LKQKIGGRRENGKA-SGRMAKGGSGSGGSDIFKIVKMIMERKF 329
              FREDNF K       ++       E+GK   G+  KGG  SG SDI+KI+KMIM +++
Sbjct: 316  GVFREDNFQKAMGALSEVRGDDPASTESGKGRKGQSKKGGGTSGPSDIYKIIKMIMLKQY 375

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             PVIVF+FS+R+CE  A+ M KL+FNT +EK+ V  VF+NA+D L+E+DRNLP IE +LP
Sbjct: 376  NPVIVFAFSKRQCEALALQMCKLEFNTDDEKEMVSTVFRNAIDALSEDDRNLPQIEQILP 435

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LL+RGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFTAV+KWDG
Sbjct: 436  LLRRGIGIHHGGLLPILKEVIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTAVRKWDG 495

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
            +  R + SGE+IQMSGRAGRRG DDRGI I+M DE++E +  K MV G+   L S F L 
Sbjct: 496  NEFRNLSSGEFIQMSGRAGRRGLDDRGIVIMMFDEKLEPSAAKLMVKGEADRLNSAFHLG 555

Query: 510  YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
            Y  ILNLM R EG  + E+++ N F QFQ   ++P++  K++  EE   ++    E ++A
Sbjct: 556  YNMILNLM-RVEG-ISPEYMLTNCFFQFQQAASVPELESKLADAEERRDAIHVPDEDDIA 613

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-PSA 628
             Y+ +   +AQL+      +  P   L +L +GRL+ VR    D+GW +VV   K+ P  
Sbjct: 614  AYYTMHKTLAQLDDDRREVLRHPSYALPFLQAGRLVNVRHEDVDFGWAIVVAYHKRMPPK 673

Query: 629  G----------------------VGTL----------------PSRGG-----GYIVPVQ 645
            G                       GT+                P++G        +VP+ 
Sbjct: 674  GQEFDPRAPPHSLYVLDVLLHCAAGTIVPKQRESAPSFSGIEPPAKGSHGNGEWLVVPIL 733

Query: 646  LPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVD 705
            L  +  LS IR+ +P DLR  DAR  +   + E+  RFP GLP L+PVKDMKI+D     
Sbjct: 734  LSHVEELSGIRVFLPKDLRLRDARAQVGKNLAEVCRRFPSGLPLLDPVKDMKIDDVSFQQ 793

Query: 706  LVNQIEELEHK---------------LFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSK 750
            L+ ++E L+ K               LFA    K    +Q++  Q +  V H + QL   
Sbjct: 794  LLGKMEILQSKMKQAPITQDKPRFEELFALYKTKQAAADQVKSIQDQIHVAHNVLQL--- 850

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
                      DELK R RVL++LG   ++ +V+ KGR AC I TGDELL+TELMFNGTFN
Sbjct: 851  ----------DELKCRRRVLRRLGFTSSEDIVEKKGRVACEISTGDELLLTELMFNGTFN 900

Query: 811  DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
            +L     AAL SCF+  ++S   + L+ +LA PL+ LQ++AR+IA++  EC+L V   EY
Sbjct: 901  ELLPEHCAALLSCFVFGERSEHPVRLKEDLAAPLRILQDTARRIAKVSVECRLPVVEQEY 960

Query: 871  VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
            V+S  +  LMD +  W +GA FA++ +MTD+FEGSIIR+ RRL E L Q+  AA+A+G  
Sbjct: 961  VQS-FKVELMDAVLQWCQGARFADICKMTDVFEGSIIRAFRRLQELLRQMAMAAKAIGND 1019

Query: 931  NLEKKFAAASESLRR--GIMFSNSLYL 955
             L  KF  A   L R   I+FS SLYL
Sbjct: 1020 ELVHKFEQALVKLERPNSIIFSPSLYL 1046


>gi|307208188|gb|EFN85662.1| Superkiller viralicidic activity 2-like 2 [Harpegnathos saltator]
          Length = 1001

 Score =  934 bits (2413), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/949 (50%), Positives = 647/949 (68%), Gaps = 62/949 (6%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVAVP    L   E             + AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 85   SCTHEVAVPYEQELVPLER---------KESKPAKEYKFILDPFQKEAILCIENNQSVLV 135

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEY+IA + R+KQRVIYT+P+KALSNQKYRE ++EFKDVGL+TGDVT++
Sbjct: 136  SAHTSAGKTVVAEYSIACSLREKQRVIYTTPIKALSNQKYREFYEEFKDVGLVTGDVTIN 195

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 196  PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 255

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+ HLHKQPCHVVYTD+RPTPLQHY+FPVGG G++LVVDE   F+
Sbjct: 256  VFLSATIPNARQFAEWVAHLHKQPCHVVYTDYRPTPLQHYIFPVGGDGIHLVVDEMGHFK 315

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF +       Q +G   + G   GR  KGG   S SG ++IFK+VKMIMER F PVI
Sbjct: 316  EENFNRAMACL--QNMGDAAK-GDTKGR--KGGLRPSNSGQTNIFKMVKMIMERNFAPVI 370

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM MSKLDFNT EEK  V++VF NA+D LN+ED+ LP +E +LPLL+R
Sbjct: 371  IFSFSKKDCEVYAMQMSKLDFNTLEEKKLVDEVFNNAIDVLNDEDKKLPQVENVLPLLRR 430

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 431  GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 490

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG D++GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 491  WITSGEYIQMAGRAGRRGLDEKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMV 550

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF QFQ + ++P +  +V +L      ++     E++ YH 
Sbjct: 551  LNLL-RVE-EINPEYMLERSFFQFQNQSSIPVLYNRVKELYAAYNIVNVEKYEEISSYHD 608

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
            ++  + +L  +  S +T+PE +L +L  GRL++V+     + WG+VVN            
Sbjct: 609  IRERLNRLSGEFQSFLTQPEYLLPFLQPGRLVQVKNEIGTFDWGIVVNFKKKNPKNPVKD 668

Query: 623  -----------VKKPSAGVGTLPSRGGG----YIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                       + K S     +P R G      +VP+   LIS +S +RL  P DLRPLD
Sbjct: 669  KTVIIIDILLHISKKSKEGNPIPCRDGEEGDVEVVPILHNLISQISALRLKCPKDLRPLD 728

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             R+++L  +QE + R+P+GLP LNP++DM I+D    D+V +IE LE KL+AH L+K  +
Sbjct: 729  TRKNVLKTIQEAKKRYPEGLPLLNPIEDMNIQDESFKDIVKKIELLEEKLYAHTLHKDPN 788

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             N+I   F  K E+   +++ K ++++++     DELK R RVLK++ +  A  V++LKG
Sbjct: 789  INKIYEQFLHKEELAANLKRAKQELKEAKSILQMDELKCRKRVLKRMAYCTAADVIELKG 848

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  +KS+E      EL  PL+Q
Sbjct: 849  RVACELNGADELLLTEMLFNGLFNVLSVPQMVALISCFVCDEKSTEMPKSTEELRGPLRQ 908

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +Q+ AR+IA++  E  LE++ D YVE   +P+LMDV+Y W K               GSI
Sbjct: 909  MQDLARRIAKVSTEVNLELDEDAYVEK-FKPYLMDVMYAWCK---------------GSI 952

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IR  RRL+E L QL  AA+ +G V LE KF+ A + ++R I+F+ SLYL
Sbjct: 953  IRCMRRLEEVLRQLCQAAKGIGNVELENKFSEAIKLIKRDIVFAASLYL 1001


>gi|448536760|ref|XP_003871188.1| hypothetical protein CORT_0G03860 [Candida orthopsilosis Co 90-125]
 gi|380355544|emb|CCG25063.1| hypothetical protein CORT_0G03860 [Candida orthopsilosis]
          Length = 1052

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/980 (48%), Positives = 657/980 (67%), Gaps = 65/980 (6%)

Query: 26   ESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQR 82
            E    +  L     H+VAVP  Y              P+   +    A+TY F LDPFQ 
Sbjct: 88   EDPNSKLKLRHQVRHQVAVPPSYPYV-----------PISEHKREKEARTYPFTLDPFQD 136

Query: 83   VSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQE 142
             +++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYREL  E
Sbjct: 137  TAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYRELQAE 196

Query: 143  FKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVV 202
            F+DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ RGVV
Sbjct: 197  FQDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKSRGVV 256

Query: 203  WEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGG 262
            WEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTDFRPTPLQHY+FP GG
Sbjct: 257  WEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTDFRPTPLQHYLFPAGG 316

Query: 263  SGLYLVVDEKEQFREDNFVKLQDTFLKQKIG---GRRENGKA-SGRMAKGGSGSGGSDIF 318
             G++LVVDEK  FRE+NF K   T +    G      E GK   G+  KGG+    +DI+
Sbjct: 317  DGIHLVVDEKGTFREENFQKAMTT-IGDNTGDDPASAEKGKGRKGQSFKGGNKDSKTDIY 375

Query: 319  KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEED 378
            KIVKMI  +K+ PVIVFSFS+R+CE+ A+ MSKLDFNT EE+  + +++ NA+  L E D
Sbjct: 376  KIVKMIYMKKYNPVIVFSFSKRDCEKLALQMSKLDFNTDEERTALTEIYNNAIGLLPESD 435

Query: 379  RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
            + LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKT
Sbjct: 436  KELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMPAKT 495

Query: 439  VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGK 498
            VVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+
Sbjct: 496  VVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQ 555

Query: 499  PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
               L S F L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + +K+  L++E  
Sbjct: 556  ADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLESSFYQFQNAASVPALEQKMQSLQKEIE 613

Query: 559  SLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
             +    EA V EY+ L   + +    +   +T P  +L +L  GR+IK++ G  D+GWG+
Sbjct: 614  GVHIDDEATVKEYYDLSQQLNKYTADVRKVVTHPGHILPFLQDGRVIKIKVGDYDYGWGM 673

Query: 619  VVNVVKK--------------------------------------PSAGVGTLPSRGG-- 638
            V + VK+                                      P    G  P+R G  
Sbjct: 674  VTSFVKRKTSRYQAQEFTAHESYIVNVFVYTMFVDSPINLIKPFNPLLPEGIRPARPGEK 733

Query: 639  --GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
                 +P+ L  I  +S +RL VP D +   A+++++  ++EL  RF  G+PK++PV+ M
Sbjct: 734  SRAEYIPITLDSIEKISSVRLRVPDDYKSAQAKRTLVKTMKELPKRFKDGIPKMDPVESM 793

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQ 755
            KI+D +   L+ +I+ +E KL+++PL+ +     +   +  KA++  +I++LK K+ +++
Sbjct: 794  KIDDDDFRTLLRKIDVIESKLYSNPLHDTARLQDLYAKYSHKADIEKKIKELKEKILEAE 853

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
                 D+L++R RVL++LG I  + +++LKGR AC I +GDELL+TEL+FNG FNDL   
Sbjct: 854  AVIQLDDLRHRKRVLRRLGFITQNDIIELKGRVACEISSGDELLLTELIFNGNFNDLSSE 913

Query: 816  QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV 875
            Q AAL SCF+  +++ E   L+ ELA+PL+ +QE A K+A++  ECK+++   +YVES  
Sbjct: 914  QSAALLSCFVFQERAKEVPRLKPELAEPLKLMQEMAAKVAKVSKECKIDITEQDYVES-F 972

Query: 876  RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
            RP LM+V++ W KGA+F ++ +MTD++EGS+IR  RRL+E + QL  AA+A+G V L++K
Sbjct: 973  RPELMEVVFAWCKGASFTQICKMTDVYEGSLIRMFRRLEELIRQLVVAAKAIGNVELQEK 1032

Query: 936  FAAASESLRRGIMFSNSLYL 955
               + E + R I+ + SLYL
Sbjct: 1033 MEKSLELVHRDIVSAGSLYL 1052


>gi|354548619|emb|CCE45356.1| hypothetical protein CPAR2_703690 [Candida parapsilosis]
          Length = 1051

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/980 (48%), Positives = 651/980 (66%), Gaps = 65/980 (6%)

Query: 26   ESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQR 82
            E    +  L     H+VAVP  Y              P+   +    A+TY F LDPFQ 
Sbjct: 87   EDPNSKLKLRHQVRHQVAVPPSYPYV-----------PISEHKREKEARTYPFTLDPFQD 135

Query: 83   VSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQE 142
             +++C++RNESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  E
Sbjct: 136  TAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELQAE 195

Query: 143  FKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVV 202
            F+DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ RGVV
Sbjct: 196  FQDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKARGVV 255

Query: 203  WEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGG 262
            WEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTDFRPTPLQHY+FP GG
Sbjct: 256  WEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTDFRPTPLQHYLFPAGG 315

Query: 263  SGLYLVVDEKEQFREDNFVKLQDTFLKQKIG---GRRENGKA-SGRMAKGGSGSGGSDIF 318
             G++LVVDEK  FRE+NF K   T +    G      E GK   G+  KGG+    +DI+
Sbjct: 316  DGIHLVVDEKGTFREENFQKAMTT-IGDNTGDDPASAEKGKGRKGQSFKGGNKDSKTDIY 374

Query: 319  KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEED 378
            KIVKMI  +K+ PVIVFSFS+++CE+ A+ MSKLDFNT EE+  + +++ NA+  L E D
Sbjct: 375  KIVKMIYMKKYNPVIVFSFSKKDCEKLALQMSKLDFNTDEERTALTEIYNNAIGLLPESD 434

Query: 379  RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
            + LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKT
Sbjct: 435  KELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMPAKT 494

Query: 439  VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGK 498
            VVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+
Sbjct: 495  VVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQ 554

Query: 499  PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
               L S F L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + +K+  L+ E  
Sbjct: 555  ADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLESSFYQFQNAASVPAMEQKMQSLQHEIE 612

Query: 559  SLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
             +    EA V EY+ L   + +    +   +T P  +L +L  GR+IKV+    D+GWG+
Sbjct: 613  GVHIDDEATVKEYYDLSQQLNKYTADVRKVVTHPGHILPFLQDGRVIKVKVSDHDYGWGM 672

Query: 619  VVNVVKK--------------------------------------PSAGVGTLPSRGG-- 638
            V + VK+                                      P    G  P+R G  
Sbjct: 673  VTSFVKRKTSRYQTQEFSAHESYIVNVFVYTMFVDSPVNLIKPFNPVLPEGIRPARPGEK 732

Query: 639  --GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
                 + + L  I  +S +RL VP D +   A+++++  ++EL  RF  G+P ++PV+ M
Sbjct: 733  SRAEYISITLDSIEKISSVRLRVPDDYKSAQAKRTLVKTMKELPKRFKDGIPLMDPVESM 792

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQ 755
            KI+D +   L+ +I+ +E KL+++PL+ +     +   +  KA+   +I+ LK K+ +++
Sbjct: 793  KIDDDDFRTLLRKIDVIESKLYSNPLHDTARLQDLYAKYSHKADTEKKIKDLKEKILEAE 852

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
                 D+L++R RVL++LG I  + +++LKGR AC I +GDELL+TEL+FNG FNDL   
Sbjct: 853  AVIQLDDLRHRKRVLRRLGFITQNDIIELKGRVACEISSGDELLLTELIFNGNFNDLSSE 912

Query: 816  QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV 875
            Q AAL SCF+  +++ E   L+ ELA+PL+ +QE A K+A++  ECK+++   +Y+ES  
Sbjct: 913  QSAALLSCFVFQERAKEAPRLKPELAEPLKLMQEMATKVAKVSKECKIDITEQDYLES-F 971

Query: 876  RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
            RP LM+V+Y W KGA+F ++ +MTD++EGS+IR  RRL+E + QL  AA+A+G V L++K
Sbjct: 972  RPELMEVVYAWCKGASFTQICKMTDVYEGSLIRMFRRLEELIRQLVVAAKAIGNVELQEK 1031

Query: 936  FAAASESLRRGIMFSNSLYL 955
               + E + R I+ + SLYL
Sbjct: 1032 MEKSLELVHRDIVSAGSLYL 1051


>gi|195050120|ref|XP_001992832.1| GH13429 [Drosophila grimshawi]
 gi|193899891|gb|EDV98757.1| GH13429 [Drosophila grimshawi]
          Length = 1067

 Score =  933 bits (2412), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/952 (49%), Positives = 641/952 (67%), Gaps = 50/952 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVA          + I G           AK Y F LDPFQ+ ++ C++ ++SVLV
Sbjct: 133  SCTHEVAAHPDQEYIPLQPIVGV---------PAKEYPFVLDPFQKQAILCIDNSQSVLV 183

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EF+DVGL+TGDVT++
Sbjct: 184  SAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFQDVGLVTGDVTIN 243

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCL+MTTEILR MLYRGSEV++EV WV+FDEIHYM+D+ERGVVWEE++I LP  ++ 
Sbjct: 244  PSASCLIMTTEILRNMLYRGSEVMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNVRY 303

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK QF+
Sbjct: 304  VFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFK 363

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKG---GSGSGGSDIFKIVKMIMERKFQPVI 333
            EDNF             G    G   GR  KG   G  SG ++IFKIVKMIMER F PVI
Sbjct: 364  EDNFTTAMAVLAN---AGEAAKGDQKGR--KGGVKGHNSGQTNIFKIVKMIMERNFAPVI 418

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+++CE +AM M+KLDFNT +EK  V++VF NA+D L+EEDR LP +E +LPLL+R
Sbjct: 419  IFSFSKKDCEVYAMQMAKLDFNTVDEKKLVDEVFHNAMDVLSEEDRRLPQVENVLPLLRR 478

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 479  GIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 538

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +++V GK   L S F L+Y  +
Sbjct: 539  WISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPVVGREIVQGKADTLNSAFHLTYNMV 598

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R E +   E++++ SF+QFQ + ALP +  +V + +++   L    E  +A YH 
Sbjct: 599  LNLL-RVE-EINPEYMLERSFYQFQNQAALPGLHDQVQQKQQQLEKLSIKDEHNIASYHH 656

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
            ++  +     K    +T+P+ ++ +L  GRL+KV  G  ++ WG+V+N  K+  +    L
Sbjct: 657  IRDQLEINGTKFREWLTKPQYLVPFLQPGRLVKVSAGKQEYDWGIVLNFKKQDQSRKNPL 716

Query: 634  PS-----------------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
             S                             RG   +VPV   L++ +S IR+  P DLR
Sbjct: 717  KSDPNVVIDVLLHVSEEAAKTGDTEPCPLNERGCMEVVPVANTLLTQISSIRVYFPSDLR 776

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              D R+++L  +QE + RFP G P L+PV DM I+D E   +V+ I + E  L  HPL+K
Sbjct: 777  TADNRRAVLKTIQEAKKRFPLGPPVLHPVDDMNIKDAEFRKIVDTIAQFERLLEEHPLHK 836

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            S +  +I + +  K ++  E+  LK++++ ++     DELK R RVL+++G+     V++
Sbjct: 837  SPELERIHKRYLDKLKLQSELSALKTELKAARSLLQMDELKYRKRVLRRMGYCKPGDVIE 896

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR AC + + DELL+TE++FNG FN+L   Q  AL SCF+  +KSSE      EL+ P
Sbjct: 897  FKGRVACELSSADELLITEMIFNGVFNELSAPQAVALLSCFVCDEKSSEAPKSATELSGP 956

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ LQ  AR+IA++  ECKL ++ D YVE   +PFLMDV+  W KG+TF  V +MTDIFE
Sbjct: 957  LRALQNLARRIAKVSTECKLNLDEDNYVEK-FKPFLMDVVLAWCKGSTFLSVCKMTDIFE 1015

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L QL  A++ +G  +LE KF+     ++R I+F+ SLYL
Sbjct: 1016 GSIIRCMRRLEELLRQLCQASKTIGNTDLENKFSEGIRLIKRDIVFAASLYL 1067


>gi|91092470|ref|XP_970408.1| PREDICTED: similar to helicase [Tribolium castaneum]
          Length = 1052

 Score =  932 bits (2409), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/967 (48%), Positives = 659/967 (68%), Gaps = 69/967 (7%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            SC HEVA P G   T  +   G         E AKTY F LD FQ+ S+ C++ N+SVLV
Sbjct: 107  SCTHEVACPPGQEYTPLKTCRG---------EPAKTYPFVLDSFQKESILCVDNNQSVLV 157

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT +AEYAIA++ ++KQRVIYT+P+KALSNQKYRE   EFKDVGL+TGDVT++
Sbjct: 158  SAHTSAGKTVIAEYAIALSLKNKQRVIYTTPIKALSNQKYREFLDEFKDVGLITGDVTIN 217

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCL+MTTEILR MLYRGSEV++EV WV+FDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 218  PSASCLIMTTEILRNMLYRGSEVMREVGWVVFDEIHYMRDKERGVVWEETLILLPHNVHF 277

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEW+ HLH QPCHVVYTD+RPTPLQH+++P GGSG+++VVDE   F+
Sbjct: 278  VFLSATIPNARQFAEWVAHLHDQPCHVVYTDYRPTPLQHFIYPAGGSGIHMVVDETGTFK 337

Query: 277  EDNF----VKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKF 329
            +D++      LQ++       G    G   GR  +GG     +  +DIFK++KMIMER F
Sbjct: 338  DDSYNAAMAVLQNS-------GDAAKGDEKGR--RGGIKNKDATQTDIFKVIKMIMERNF 388

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             PVIVFSFS+++CE  AM M+KLDFNT  EK  V++VF NA+D L+++DR+LP +E +LP
Sbjct: 389  APVIVFSFSKKDCEVFAMQMTKLDFNTTAEKHLVDEVFNNAMDVLSDDDRHLPQVENLLP 448

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LL+RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT ++K+DG
Sbjct: 449  LLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTGMRKFDG 508

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
              +R+I SGEYIQMSGRAGRRG DD+GI I+MVDE++     +++V G P P+ S F L+
Sbjct: 509  HEYRWITSGEYIQMSGRAGRRGLDDKGIVILMVDEKVPPAAGRNIVKGLPDPINSAFHLT 568

Query: 510  YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
            Y  +LNL+ R E +   E++++ SF+QFQ + A+P +  K  +  EE  +L    E ++A
Sbjct: 569  YNMVLNLL-RVE-EINPEYMLERSFYQFQNQTAIPGLYDKYKEKLEEFNNLQIESEPQIA 626

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK----- 624
             YH ++ ++ +L  +  S +T+P  ++ +L  GRL+K++ G T++ WG VVN  K     
Sbjct: 627  SYHTIRQELDKLGLQFRSYLTKPNYLIPFLQPGRLVKIKVGETEYDWGAVVNFKKVSENI 686

Query: 625  -----------KPSAGV------------------GTLP------SRGGGYIVPVQLPLI 649
                       K S  V                    +P       +G   IV V+  LI
Sbjct: 687  PGRKHGKANPAKTSTKVQVDLLLHVMSSEDGSNNKDVIPKPCLDGQKGEVEIVSVESTLI 746

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
            + +S +RL  P DLR  D R+ +  +++E++ RFP+G P LNP+ DMKI + + VD+V +
Sbjct: 747  THISTVRLYCPNDLRQKDTRKGVYKSIKEVKKRFPEGPPLLNPIDDMKITESDFVDIVKK 806

Query: 710  IEELEHKLFAHPLNKSQDEN-QIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            IE+LE K++ HPL+K    N +   +++K +   E+   + K+ +++     DELK R R
Sbjct: 807  IEQLEKKMYDHPLHKHSLLNTEYEKYEQKVKCKEELAVARQKLLEAKSVLQLDELKCRKR 866

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++LG+     V+QLKGR AC + + DELL+TE++FNG F +L   Q  AL S F+  +
Sbjct: 867  VLRRLGYCTNTDVIQLKGRVACELSSADELLITEMIFNGVFGNLSPAQACALLSTFVCDE 926

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            KS+E   L  EL+ PL+Q+Q+ AR+IA++  E +L ++ D YVE   +P LMDV++ W  
Sbjct: 927  KSNEMPKLSEELSGPLRQMQDLARRIAKVSTEARLPLDEDAYVER-FKPGLMDVVFSWCN 985

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            G++F+++ +MT+IFEGSI+R  RRL+E L Q+  A++ +G  +LE KF  A + ++R I+
Sbjct: 986  GSSFSDLCKMTEIFEGSIVRCMRRLEELLRQMIQASKTIGNTDLEDKFNTAIKVIKRDII 1045

Query: 949  FSNSLYL 955
            FS+SLYL
Sbjct: 1046 FSSSLYL 1052


>gi|328851703|gb|EGG00855.1| hypothetical protein MELLADRAFT_111500 [Melampsora larici-populina
            98AG31]
          Length = 1026

 Score =  932 bits (2408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/976 (50%), Positives = 654/976 (67%), Gaps = 62/976 (6%)

Query: 30   KQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLE 89
            +Q  L+    H+VA+P  Y      A H    NP      A++Y F LDPFQ+VS++ +E
Sbjct: 63   EQVTLSHQVRHQVAIPPTYPYVPISA-HKPPINP------ARSYPFTLDPFQKVSISSIE 115

Query: 90   RNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLM 149
            RNESVLVSAHTSAGKT VAEYAIA    +KQRVIYTSP+KALSNQKYRE+  EF DVGLM
Sbjct: 116  RNESVLVSAHTSAGKTVVAEYAIAQCLANKQRVIYTSPIKALSNQKYREMTAEFGDVGLM 175

Query: 150  TGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIF 209
            TGDVT++P+ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ERGVVWEE+II 
Sbjct: 176  TGDVTINPSASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKERGVVWEETIIL 235

Query: 210  LPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVV 269
            LP  ++ VFLSAT+ NA QFAEWIC  H QPCHVVYTDFRPTPLQHY+FP GG G++LVV
Sbjct: 236  LPHTVRYVFLSATIPNAMQFAEWICKTHDQPCHVVYTDFRPTPLQHYLFPAGGDGIHLVV 295

Query: 270  DEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG----SDIFKIVKMIM 325
            DEK  FREDNF+K   +    K  G       SGR  +G +  GG    SDI+KIVKMIM
Sbjct: 296  DEKSVFREDNFMKAMGSLKDSK--GEDPASANSGRNKQGKTKKGGTKGPSDIYKIVKMIM 353

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVF+FS+RECE  A+ MSKL+FN+ EEKDTVE VF NA+  L+E+D++LP I 
Sbjct: 354  VKNYNPVIVFAFSKRECEALALQMSKLEFNSTEEKDTVETVFNNAISGLSEDDQSLPQIA 413

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+
Sbjct: 414  HILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTTVR 473

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG   R + SGEYIQMSGRAGRRG DDRGI I+M DEQ+E    ++MV G+   L S 
Sbjct: 474  KFDGKDFRSLSSGEYIQMSGRAGRRGLDDRGIVIMMCDEQLEPTVARNMVKGEADRLDSA 533

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E++++  F+QFQ    LP +  ++  L+   A +    E
Sbjct: 534  FHLGYNMILNLM-RVEG-VSPEYMLERCFYQFQSSDQLPVLENEIRGLQAARAEITVPHE 591

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK- 624
            + V EY+ ++ ++    + L   I  P   L +L  GRL++V+ G  D+ WG VVN  K 
Sbjct: 592  SLVKEYYDIRHELNIQNQDLREVINHPTYSLPFLQPGRLVRVKFGEIDYDWGCVVNFQKR 651

Query: 625  -----KP-------------------------SAGVGTL----------PSRGGG--YIV 642
                 KP                           G GTL          P    G   +V
Sbjct: 652  LGDRGKPLGPDVPAQQTFIVDVLLHIASAQEVQKGKGTLGGSSNFVKPCPEGDAGEFAVV 711

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            PV L  +  +S+IR+ +P DL+PL++RQ+ L AV+E++ RFP+G+  L+PV++M I+D E
Sbjct: 712  PVLLSTLDGISRIRIFLPKDLKPLESRQTALKAVKEVKRRFPEGIALLDPVENMGIQDEE 771

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQ-IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
               L+ +IE LE  L  H L K    ++    + +K ++++ I+ ++ K+ D+    + +
Sbjct: 772  FHKLLKRIETLESSLKNHKLIKEDKLSEWYELYSKKEQISNSIKLIRHKISDTHNVIYME 831

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +LKNR + L++LG  + D VV++KGR AC I +GDELL+TE++FNG F++L   Q AAL 
Sbjct: 832  DLKNRKKALRRLGFSNKDDVVEIKGRVACEISSGDELLLTEMIFNGAFSELTPEQCAALL 891

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF+  +KS +   L+ EL  P+++++E+A KIA    E  + ++  EYV S  +  +MD
Sbjct: 892  SCFVFTEKSEQITKLKAELEGPMKKMKEAATKIAHEIKEAHIAIDEVEYVNS-FKTEMMD 950

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
             +Y W KG+TFAE+ +MTDIFEGS+IR  RRL E + Q+  AA+A+G V LE+KF  + E
Sbjct: 951  AVYNWCKGSTFAEICKMTDIFEGSLIRCFRRLQELIRQMSMAAKAIGNVELEEKFNQSLE 1010

Query: 942  SLRR--GIMFSNSLYL 955
             L R   ++F+ SLYL
Sbjct: 1011 KLERPLSVVFNPSLYL 1026


>gi|50419435|ref|XP_458244.1| DEHA2C13068p [Debaryomyces hansenii CBS767]
 gi|49653910|emb|CAG86320.1| DEHA2C13068p [Debaryomyces hansenii CBS767]
          Length = 1062

 Score =  931 bits (2406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/977 (48%), Positives = 655/977 (67%), Gaps = 69/977 (7%)

Query: 31   QRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM-----AKTYSFELDPFQRVSV 85
            Q  L     H+VA+P  Y              P+  GE      A+TY F LDPFQ  ++
Sbjct: 103  QLQLRHQVRHQVAIPPEYPYV-----------PI--GEHKRQNEARTYPFVLDPFQDTAI 149

Query: 86   ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
            +C++R+ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  EF D
Sbjct: 150  SCIDRSESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELLAEFGD 209

Query: 146  VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEE 205
            VGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ RGVVWEE
Sbjct: 210  VGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKARGVVWEE 269

Query: 206  SIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGL 265
            +II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTDFRPTPLQHY+FP  G G+
Sbjct: 270  TIILLPDKVHYVFLSATIPNAMEFAEWIVKIHAQPCHVVYTDFRPTPLQHYLFPAAGDGI 329

Query: 266  YLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIV 321
            +LVVDEK  FRE+NF K    + D          +  GK  G+  KGG+  G SDI+KIV
Sbjct: 330  HLVVDEKGTFREENFQKAMASISDNVGDDPSSADKSKGK-KGQTYKGGNKDGKSDIYKIV 388

Query: 322  KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
            KMI  +++ PVIVFSFS+R+CE  A+ MSKLDFNT +E++ + ++F NA++ L + D+ L
Sbjct: 389  KMIYMKRYNPVIVFSFSKRDCESLALKMSKLDFNTDDEREALTKIFNNAIELLPDADKEL 448

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
            P I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 449  PQIKNILPLLRRGIGIHHSGLLPILKEIIEILFQEGLLKVLFATETFSIGLNMPAKTVVF 508

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
            T+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   
Sbjct: 509  TSVRKWDGKGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADR 568

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S F L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + K + +L  ++ S+ 
Sbjct: 569  LDSAFHLGYNMILNLM-RVEG-ISPEFMLESSFYQFQNAASVPVLEKNLQELTLKSNSIQ 626

Query: 562  ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV-- 619
               EA V EY+ LK      +  +   +T P  +L +L +GR+IKV+ G  D+GWG+V  
Sbjct: 627  IDDEATVREYYDLKKQFDIYQDDVRQVVTHPGHILPFLQAGRVIKVKVGDMDYGWGMVTS 686

Query: 620  ----------------------------------VNVVK--KPSAGVGTLPSRGG----G 639
                                              VN++K   P   +G  P+  G     
Sbjct: 687  FTKRTNKRNPSQTYSDHEAYIVNVFVYTMFVDSPVNLIKSFNPDLPIGIRPANAGEKSRA 746

Query: 640  YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE 699
              +P+ L  I  +S +RL VP + +   A++++L  +++L  R P G+P ++P++ MKI+
Sbjct: 747  EYIPITLDSIEKISSVRLRVPDEFKSSSAKKNLLKTMKDLPKRLPDGIPLMDPIESMKID 806

Query: 700  DPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
            D +   L+ +I+ LE K+ ++PL++S + ++    +  K E+ ++I+ LK K+ ++Q   
Sbjct: 807  DNDFKLLLRKIDVLESKMLSNPLHESVRLKDLYEKYSEKVEIENKIKSLKDKILEAQAVI 866

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              D+L++R RVL++LG    + +++LKGR AC I TGDELL+TEL+FNGTFNDL   Q A
Sbjct: 867  QLDDLRHRKRVLRRLGFTTQNDIIELKGRVACEISTGDELLLTELIFNGTFNDLTCEQCA 926

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
            +L SCF+  +K+ E   L+ ELA+PL+ +Q+ A KIA++  ECK+E+   EYVES  RP 
Sbjct: 927  SLLSCFVFQEKAKEVPRLKPELAEPLKSMQDMASKIAKVFKECKIELVEKEYVES-FRPE 985

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            LM+V Y W KGA+F ++ +MTD++EGS+IR  +RL+E L Q+  AA+ +G   LE+K   
Sbjct: 986  LMEVTYAWCKGASFTQICKMTDVYEGSLIRMFKRLEEMLRQMVTAAKTIGNAELEEKMEK 1045

Query: 939  ASESLRRGIMFSNSLYL 955
            +   + R I+ + SLYL
Sbjct: 1046 SMGLVHRDIVSAGSLYL 1062


>gi|50550521|ref|XP_502733.1| YALI0D12210p [Yarrowia lipolytica]
 gi|49648601|emb|CAG80921.1| YALI0D12210p [Yarrowia lipolytica CLIB122]
          Length = 1041

 Score =  930 bits (2404), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/973 (50%), Positives = 656/973 (67%), Gaps = 66/973 (6%)

Query: 26   ESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSV 85
            +S+  +  L     H+VAVP GY   K  + H    +P      A+TY F LDPFQ VS+
Sbjct: 92   DSSDGKVKLQHQVRHQVAVPPGYDY-KSISDH-VIVDP------ARTYPFTLDPFQAVSI 143

Query: 86   ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
              ++R+ESVLVSAHTSAGKT VAEYAIA   R+KQRVIYTSP+KALSNQKYREL ++F D
Sbjct: 144  QSIDRHESVLVSAHTSAGKTVVAEYAIAQCLRNKQRVIYTSPIKALSNQKYRELLEDFGD 203

Query: 146  VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEE 205
            VGLMTGDVT++PNASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE
Sbjct: 204  VGLMTGDVTINPNASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDTERGVVWEE 263

Query: 206  SIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGL 265
            +II LP  ++ VFLSAT+ NA QFAEWI  +H+QPCHVVYT+FRPTPLQHY+FP GG G+
Sbjct: 264  TIILLPDTVRYVFLSATIPNALQFAEWIVKIHQQPCHVVYTNFRPTPLQHYLFPSGGDGI 323

Query: 266  YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA-SGRMAKGGSG-SGGSDIFKIVKM 323
            +LVVDE+ QFRE+NF         QK  G+ +N    + + A GG G +G SDI+KI+KM
Sbjct: 324  HLVVDERSQFREENF---------QKAMGQLQNKDGETKKQAGGGKGVTGNSDIYKIIKM 374

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            IM + + PVIVFSFS+++CE  AM MSKLDFNT +E   V++VF NA+  L+E+DR+LP 
Sbjct: 375  IMMKNYNPVIVFSFSKKDCEALAMKMSKLDFNTADEHAMVQKVFTNALSQLSEDDRSLPQ 434

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT 
Sbjct: 435  IKHILPLLKRGIGIHHSGLLPILKEVIEILFQEGLLKCLFATETFSIGLNMPAKTVVFTG 494

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
            V+KWDG + R++  GEYIQMSGRAGRRG DDRGI I+M+DEQME    K MV G+   L 
Sbjct: 495  VRKWDGKALRWVSGGEYIQMSGRAGRRGLDDRGIVILMLDEQMEPAVAKGMVKGEADRLN 554

Query: 504  STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
            S F L Y  ILNLM R EG  + E++++  F QFQ    +P++  K  ++E EA ++  +
Sbjct: 555  SAFHLGYNMILNLM-RVEG-ISPEYMLERCFFQFQNVSQIPELEDKRREVEAEAEAIKIT 612

Query: 564  GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR----EGGT----DWG 615
                V EY+ LK  IA   + +   IT P  VL +L  GRL++V+    +GG     D+G
Sbjct: 613  N-PNVKEYYDLKESIASYGEDMRHIITHPSNVLSFLQPGRLVEVKDEIEDGGKKVQRDFG 671

Query: 616  WGVVVNVVKKP---------------------SAGVGTLPSR-----------GGGYIVP 643
            WG VV+  K P                         G+L S+           G   +VP
Sbjct: 672  WGAVVSFAKVPPKLQLQKNLSDHEIYIVDVLLPVKEGSLSSKQPNSIRPDLENGQFEVVP 731

Query: 644  VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
            V L  +  ++ IR+ +P  L+    R+ +  +++E++ RFP  +P+L+P+++MKI+D   
Sbjct: 732  VTLKSLKAIANIRIVLPKSLKSASERRVVAKSIKEVKRRFPD-VPQLDPIENMKIKDETF 790

Query: 704  VDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDE 762
              L+ ++E LE KL  +P     D +++   +  K  +  ++++L   +         DE
Sbjct: 791  QSLIKKMEVLEGKLAKNPFASEPDRDEVYAEYAGKMALEKKVKELSDDIAKHYSILQLDE 850

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
            LKNR RVL++LG I+ D V+QLKGR AC I +GDELL+TE++FNG FNDL     AAL S
Sbjct: 851  LKNRKRVLRRLGFIE-DDVIQLKGRVACEISSGDELLLTEMLFNGNFNDLTPEVTAALMS 909

Query: 823  CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            CF+  + + EQ  LR EL  PL+ +QE AR +A++  ECKL+V VD+YV +  +  LMDV
Sbjct: 910  CFVFDEMTKEQPKLRAELDTPLKAMQEVARNVAKVSRECKLDVVVDDYV-NKFKMQLMDV 968

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            +Y W  GA+F+++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G   LE KF  A E 
Sbjct: 969  VYAWCNGASFSQICKMTDVYEGSLIRMFRRLEELLRQMAMAAKTIGNEKLEDKFNLALEK 1028

Query: 943  LRRGIMFSNSLYL 955
            ++R ++ + SLYL
Sbjct: 1029 IKRDLVSAASLYL 1041


>gi|328768590|gb|EGF78636.1| hypothetical protein BATDEDRAFT_20298 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1115

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/990 (49%), Positives = 656/990 (66%), Gaps = 75/990 (7%)

Query: 27   STKKQRNLTRSCVHEVAVPSGY---ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRV 83
            STK+Q  ++    H+VAVP+GY    L+ D+      ANP      A+TY F+LDPFQ  
Sbjct: 140  STKEQLVISHQVRHQVAVPTGYDYTPLSHDKPP----ANP------ARTYPFKLDPFQAT 189

Query: 84   SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
            S+  +ER ESVLVSAHTSAGKT VAEYAIA +   KQRVIYTSP+KALSNQKYREL QEF
Sbjct: 190  SITSIERGESVLVSAHTSAGKTVVAEYAIAKSLLQKQRVIYTSPIKALSNQKYRELLQEF 249

Query: 144  KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
             DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D+ RGVVW
Sbjct: 250  GDVGLMTGDVTINPGASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKARGVVW 309

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EE++I LP  ++ VFLSAT+ NA QFAEWIC +HKQPCHVVYTD+RPTPLQHY+FP GG 
Sbjct: 310  EETLIMLPDKVRFVFLSATIPNAMQFAEWICKIHKQPCHVVYTDYRPTPLQHYLFPSGGE 369

Query: 264  GLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFK 319
            G+YL VDEK  FR+ NF K    L D       G   +    S R  + GS  G SD+FK
Sbjct: 370  GIYLAVDEKSVFRQANFQKAISALGDDATDPTTGASIKKSTGSSR-KRDGSTKGPSDLFK 428

Query: 320  IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
            I++MIM + + PVIVFSFS+RECE +A+ +SKLDFN  +EK  V+ VF+NA+  L+E+DR
Sbjct: 429  ILRMIMVKNYHPVIVFSFSKRECEANALQLSKLDFNDDDEKQLVKSVFENAITSLSEDDR 488

Query: 380  NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
             LP IE +LPLLKRGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTV
Sbjct: 489  GLPQIEHILPLLKRGIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSIGLNMPAKTV 548

Query: 440  VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKP 499
            VFTAV+K+DG   R++  GEYIQMSGRAGRRG DDRG+ I+M+DE+ME N  KDM+ G  
Sbjct: 549  VFTAVRKFDGKETRWLSGGEYIQMSGRAGRRGLDDRGVVILMIDEKMEPNVAKDMLKGVS 608

Query: 500  APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
             PL S F L+Y  ILNL+ R EG  + E++++ SF QFQ    +P + K +   E+    
Sbjct: 609  DPLNSAFHLTYTMILNLL-RIEG-VSPEYMLQGSFFQFQNSVRVPQLIKDMDIFEKRRDG 666

Query: 560  LDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV-REGGT-----D 613
            +    E  V EY++++  +    + +   + +P   + +L  GRL+++ RE  T     D
Sbjct: 667  ILVEDEQLVGEYYQIRSQLELYRRDMRDVLNQPAYSVPFLQPGRLVRIARESTTENPNGD 726

Query: 614  WGWGVVVNVVK--KPSAGVG----TLP--------------------------------- 634
            +GWG++VN VK  +P A +G    TL                                  
Sbjct: 727  FGWGIIVNFVKPQQPKAKMGGNIKTLTEEPQYIVDVLLNCAPAENDDSSASSLLSTSVQP 786

Query: 635  -----SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                  RG   IVP  L     +S +R+++P D+R L +R+  L  ++E+ESRF   +P 
Sbjct: 787  CPKDIKRGSALIVPCLLNAFDGISSVRINMPKDMRLLASRRQCLATIKEVESRFKDKVPI 846

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLK 748
            L+P+KDM+IED     LV++I  LE +L+ H L N  +       ++ K  +  +I+ ++
Sbjct: 847  LDPIKDMRIEDALFQKLVSKIHVLEPRLYEHALHNDPRLPELYSSYESKMILVAKIKDIR 906

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
             ++  ++     DELK R RVL++LG+ +A  ++++KGR AC I  GDEL++TEL+FNG 
Sbjct: 907  RQITQAESVLQMDELKARRRVLRRLGYTNAQDIIEIKGRVACEISAGDELVLTELLFNGV 966

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQ---INLRMELAKPLQQLQESARKIAEIQNECKLEV 865
            F DL   Q  +L SCF   ++S  +   ++    L +PL+ L+E+ARKIA++  E K+ +
Sbjct: 967  FTDLTVDQTVSLLSCFTFGERSGGEDPTVSFPDTLKQPLRILRETARKIAQVSQESKMTI 1026

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
            +  EYVES  RP LM ++  W +GA FA++ +MTDIFEGSIIRS RRL+E L Q+ AA++
Sbjct: 1027 DEKEYVES-FRPDLMQIVMSWCQGARFADICRMTDIFEGSIIRSMRRLEELLRQMVAASK 1085

Query: 926  AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ++G  +LE KF      ++R I+F+ SLYL
Sbjct: 1086 SIGNSDLETKFTEGIAKIKRDIVFAASLYL 1115


>gi|302786352|ref|XP_002974947.1| hypothetical protein SELMODRAFT_174598 [Selaginella moellendorffii]
 gi|300157106|gb|EFJ23732.1| hypothetical protein SELMODRAFT_174598 [Selaginella moellendorffii]
          Length = 986

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/1002 (48%), Positives = 656/1002 (65%), Gaps = 72/1002 (7%)

Query: 7   AGKRKAPEEDLHVTGTPEEESTKKQRNLT-----RSCVHEVAVPSGYALTKDEAIHGTFA 61
           A  ++  E+DL    +P  +  K    L      R C+HE+A P G+  + ++      A
Sbjct: 4   ASAKRGAEDDL---ASPSLKQAKISETLAPAAIERGCIHEIAYPDGFQASGEK--RDAPA 58

Query: 62  NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            P      AK Y F LD FQR ++A LE  ESV+VSAHTSAGKT VAEYAIAMA RD+QR
Sbjct: 59  KP------AKEYPFTLDAFQREAIAALEAGESVMVSAHTSAGKTVVAEYAIAMALRDQQR 112

Query: 122 VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           V+YTSP+KALSNQK+REL +EF DVGLMTGDVT+SPNASCLVMTTEILR M YRGSEV++
Sbjct: 113 VLYTSPIKALSNQKFRELAEEFSDVGLMTGDVTISPNASCLVMTTEILRSMQYRGSEVMR 172

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           EVAW+IFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +H+QPC
Sbjct: 173 EVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPC 232

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
           H+VYTDFRPTPLQHY+FP GG GLYLVVDE+  FRED+F K  +      I   +++GK 
Sbjct: 233 HIVYTDFRPTPLQHYIFPAGGDGLYLVVDEQGTFREDSFSKAVNAV---AIADPKKDGKW 289

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
             R  +G      SDI+KIVKMI+ R++ PVIVFSFS+R+CE  AM MSK+D N+++EK 
Sbjct: 290 QKRKEEGKDEP--SDIWKIVKMIIARQYDPVIVFSFSKRDCEHLAMQMSKMDLNSEDEKK 347

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            VE +F+NA+D L+E+D+ LP + L LP LKRGI VHHSGLLP++KE++E+LFQEGLVK 
Sbjct: 348 LVEGIFRNAMDSLSEDDKKLPQVSLALPYLKRGIGVHHSGLLPILKEVIEILFQEGLVKC 407

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETF++GLNMPAKTVVFT V+K+DGD  R+I SGEYIQMSGRAGRRG D+ G+CI M
Sbjct: 408 LFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGLDNFGVCIFM 467

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           +DE++E    K +V G   PL S F LSY  ILN M   E     E +++ SFHQFQ ++
Sbjct: 468 LDEKLEPAVAKQIVKGTADPLNSAFHLSYNMILNQMRCEES--NPEDLLRQSFHQFQSDR 525

Query: 542 ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
           +LP + ++V  LEEE AS+    E ++AEY+     + +++ ++   I  P   L +L  
Sbjct: 526 SLPILEQRVKNLEEERASVLIEEEEKLAEYYSSVNQLRKIKNQIREIILAPRSCLPFLQP 585

Query: 602 GRLIKVREGG-------------TDWGWGVVVNVVKKPSAGVGTLPSRGG--GYIV---- 642
           GRL+++                     WGV++N  K  S         G    Y+V    
Sbjct: 586 GRLVRIFRSADAVEQQNSVLMEQDPAVWGVIINFEKAQSKDSDEGKPNGAHLKYVVDVLV 645

Query: 643 ---------------PVQL-----PLIS--------TLSKIRLSVPPDLRPLDARQSILL 674
                          PV L     PL++        +LS +R+ +P DLRP +AR+  L 
Sbjct: 646 NCVTEKEGDRPKVARPVSLDEDGQPLVTAFPLSQVESLSAVRIRIPRDLRPAEAREQTLR 705

Query: 675 AVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ-IRC 733
            V E+  RFP GL  L+P  DMK+E  +   LV ++E LE  +  HP+ KS   N+ +R 
Sbjct: 706 TVLEVLKRFPDGLQLLDPEDDMKVESSDYKKLVRRVEALETLIAKHPVAKSPTLNERLRL 765

Query: 734 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
            Q+K ++   I+  + ++R +    F+DELK R RVL++L +   D VVQLKG  AC I 
Sbjct: 766 LQKKEDLAETIRVARKEVRAASALIFKDELKARRRVLRRLSYATRDDVVQLKGLVACEIS 825

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
           + DEL+VTEL+FNG F D+   Q AAL SCF+  +K+     L  ELA    QLQ++AR+
Sbjct: 826 SADELIVTELIFNGVFKDVTAEQAAALLSCFVWQEKTKMAKPLSQELAGLFSQLQDTARQ 885

Query: 854 IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
           + ++Q ECK+ V+V+EYV S  RP +M+ ++ W  G +F EV+++ ++FEGS+IR+ RRL
Sbjct: 886 VGKLQVECKVPVDVEEYVNS-FRPDIMEGVHAWCTGKSFLEVLKVAEVFEGSLIRALRRL 944

Query: 914 DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +E + QL  A++A+GE ++E KF  AS  ++R I+F+ SLYL
Sbjct: 945 EELVQQLVTASKAIGEADMEAKFQDASTKMKRDIVFAASLYL 986


>gi|195115276|ref|XP_002002190.1| GI13953 [Drosophila mojavensis]
 gi|193912765|gb|EDW11632.1| GI13953 [Drosophila mojavensis]
          Length = 1063

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/955 (49%), Positives = 648/955 (67%), Gaps = 55/955 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMAKTYSFELDPFQRVSVACLERNESV 94
            SC HEVA     A    E I      P+  + G  AK Y F LDPFQ+ ++ C++ ++SV
Sbjct: 128  SCTHEVA-----AHPDQEYI------PLQPFTGVPAKQYPFVLDPFQKQAILCIDNSQSV 176

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA +   KQRVIYT+P+KALSNQK+RE   EF+DVGL+TGDVT
Sbjct: 177  LVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKALSNQKFREFTDEFEDVGLVTGDVT 236

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++P+ASCL+MTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +
Sbjct: 237  INPSASCLIMTTEILRNMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNV 296

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            + VFLSAT+ NA QFAEW+CHLHKQPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK Q
Sbjct: 297  RYVFLSATIPNARQFAEWVCHLHKQPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQ 356

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG---GSGSGGSDIFKIVKMIMERKFQP 331
            F+E+NF             G    G   GR  KG   G   G ++IFKIVKMIMER F P
Sbjct: 357  FKEENFTTAMAVLAN---AGEAAKGDQKGR--KGGIKGHNEGQTNIFKIVKMIMERHFAP 411

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VI+FSFS+++CE +AM M+KLDFNT +EK  V++VF+NA+D L+E+DR LP +E +LPLL
Sbjct: 412  VIIFSFSKKDCEVYAMQMAKLDFNTVDEKKLVDEVFKNAMDVLSEDDRRLPQVENVLPLL 471

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG  
Sbjct: 472  RRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKD 531

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQM+GRAGRRG DD+GI I+M+DE++     +++V G+   L S F L+Y 
Sbjct: 532  FRWISSGEYIQMAGRAGRRGLDDKGIVILMIDEKVSPVVGREIVQGQADTLNSAFHLTYN 591

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +LNL+ R E +   E++++ SF+QFQ +  LP +  +V +  ++   +    E  +A Y
Sbjct: 592  MVLNLL-RVE-EINPEYMLERSFYQFQNQATLPGLYDQVQQKTQQLEKIKIKDEHNIASY 649

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV--------- 622
            H ++  +     K    +T+P+ +  +L  GRL+KV  G  ++ WG+V+N          
Sbjct: 650  HNIRDQLEIYGNKYREWMTKPQYLASFLQPGRLVKVSAGKHEYDWGLVLNFKRKQDLNRK 709

Query: 623  ----------------VKKPSAGVG-TLPS----RGGGYIVPVQLPLISTLSKIRLSVPP 661
                            V + SA  G T P     RG   +VPV   LI+ +S IR+  P 
Sbjct: 710  NPLESEPGIVIDVLLHVSEESAKTGDTEPCPPNERGCMEVVPVSNSLITQISSIRVYFPS 769

Query: 662  DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
            DLR  D R+++L  +QE + RFP G P L+P+KDM I+D E   +++ I + E  L AHP
Sbjct: 770  DLRTADNRRAVLKTIQEAKKRFPLGPPLLHPIKDMNIKDGEFRKIMDTIAQFEQLLEAHP 829

Query: 722  LNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
            L+KS + +++ + +  K ++ +E++ LK++++ ++     DELK R RVL+++G+     
Sbjct: 830  LHKSPELDRVHKRYIEKLKLQNEVKDLKAELKAARSLLQMDELKFRKRVLRRMGYCKPGD 889

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
            V++ KGR AC + + DELL+TE++FNG FNDL   Q  AL SCF+  +KSSE      EL
Sbjct: 890  VIEFKGRVACELSSADELLITEMIFNGVFNDLTAPQAVALLSCFVCDEKSSEAPKSATEL 949

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
            + PL+ LQ  AR+IA++  ECKL ++ + YVE   +P+LMDV+  W  G++F  V +MTD
Sbjct: 950  SGPLRSLQSLARRIAKVSTECKLNLDEESYVEK-FKPYLMDVVLAWCNGSSFLNVCKMTD 1008

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IFEGSIIR  RRL+E L QL  A++ +G  +LE KF+     L+R I+F+ SLYL
Sbjct: 1009 IFEGSIIRCMRRLEELLRQLCQASKTIGNTDLENKFSEGIRLLKRDIVFAASLYL 1063


>gi|320580337|gb|EFW94560.1| Dead-box family helicase [Ogataea parapolymorpha DL-1]
          Length = 1045

 Score =  929 bits (2402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/982 (49%), Positives = 656/982 (66%), Gaps = 62/982 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +  T  + S  K R+  R   H+VAVP GY    D    G           A+TY F LD
Sbjct: 81   LASTDTDASKVKLRHQVR---HQVAVPPGY----DYVPIGQHKRKTE----ARTYPFTLD 129

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ  S++C++R ESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYRE
Sbjct: 130  PFQDTSISCIDRQESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYRE 189

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            L  +F DVGLMTGDVT++P+A CLVMTTEILR MLYRGSE+++EVAWVIFDE+HYM+D+ 
Sbjct: 190  LQADFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEIMREVAWVIFDEVHYMRDKS 249

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  +  VFLSAT+ NA +FAEWIC +H QPCHVVYTDFRPTPLQHY+F
Sbjct: 250  RGVVWEETIILLPDNVHHVFLSATIPNAMEFAEWICKVHNQPCHVVYTDFRPTPLQHYLF 309

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG---GRRENGKASGRMAKGGSGSGGS 315
            P  G G++LVVDEK  FRE+NF K   + +  K+G   G  E    +G+  KGG   G S
Sbjct: 310  PADGEGIHLVVDEKGTFREENFQKAMAS-ISNKMGDDPGAIET--KNGKSWKGGVKEGKS 366

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
            DI+KIVKMI  +K+ PVIVFSFS+R+CE  AM MSKLDFNT EE++ + ++F NA+  L+
Sbjct: 367  DIYKIVKMIWMKKYNPVIVFSFSKRDCEALAMKMSKLDFNTDEEREMLTKIFNNAISILS 426

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
            ++D+ LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMP
Sbjct: 427  DDDKELPQIKHILPLLRRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMP 486

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
            AKTVVFT+V+KWDG+  R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV
Sbjct: 487  AKTVVFTSVRKWDGNGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMV 546

Query: 496  LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
             G    L S F L Y  ILNLM R EG  + E ++ +SF QFQ   + P++ K+++K E+
Sbjct: 547  KGVADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLGSSFFQFQNSISEPELKKQLAKYEQ 604

Query: 556  EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
            E  S+       + EY++L+  + Q  + +   +T P  +L +L  GRL++V   G D+G
Sbjct: 605  ELDSIVIDDMENIKEYYELQKQLDQYNEDVRKIVTHPGNILPHLKGGRLVEVNINGMDYG 664

Query: 616  WGVVVNVVKK----------------------------PSAGV---------GTLPSRGG 638
            W +V++  K+                            P   +         G  P++ G
Sbjct: 665  WAIVIDFSKRNNKRNQAQYSDHESYVVNVFVNTMFVDSPVNLIKPFQVQLVEGIRPAKEG 724

Query: 639  ----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
                  ++P+ L  I  +S  R  +P D++   AR+++  A++E+  R P GLP L+PV 
Sbjct: 725  EETRSEVIPITLDSIKKISSCRSILPQDMKNSQARKTLRKALKEIVKRHPDGLPILDPVT 784

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRD 753
             M I+D E   L+ +IE LE KL ++PL +S    ++   +  +  +  +I + K K+ +
Sbjct: 785  KMHIKDEEFKVLLRKIEILESKLHSNPLAQSARLKELYDQYSHRMSIVDKINETKKKISE 844

Query: 754  SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
             Q     D+LK+R RVL++LG    D +V++KGR AC I TGDELL+TEL+FNGTFN+LD
Sbjct: 845  VQSLIQMDDLKHRKRVLRRLGFTTQDDIVEMKGRVACEISTGDELLLTELIFNGTFNELD 904

Query: 814  HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
              Q AAL SCF+  +++     L+ ELA+PL+ L+E A KIA++  ECKLEV   +YVES
Sbjct: 905  PSQCAALLSCFVFQERTKVTPRLKPELAEPLKALKEMASKIAKVCRECKLEVVEKDYVES 964

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
              +P LM+V+Y W +GA+F ++  MTD++EGS+IRS RRL+E + QL  AA+ +G V LE
Sbjct: 965  -FKPDLMEVVYAWCQGASFTQICIMTDVYEGSLIRSFRRLEELIKQLVDAARTIGNVALE 1023

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
            +K   ++E + R I+ + SLYL
Sbjct: 1024 EKLTRSAELIHRDIVSAASLYL 1045


>gi|357606471|gb|EHJ65082.1| hypothetical protein KGM_17243 [Danaus plexippus]
          Length = 1036

 Score =  929 bits (2401), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/952 (49%), Positives = 644/952 (67%), Gaps = 51/952 (5%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C HEVA+P      +   I           E AK YSF LDPFQ+ ++ C++  +SVLVS
Sbjct: 102  CTHEVAIPPNQEYAQLMPI---------TSEPAKQYSFILDPFQKEAIMCIDNLQSVLVS 152

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT VAEYAIA++ ++KQRVIYT+P+KALSNQKYRE  +EF DVGL+TGDVT++P
Sbjct: 153  AHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINP 212

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
            +ASCL+MTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ERGVVWEE++I LP  +  V
Sbjct: 213  SASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVVWEETLILLPDNVHYV 272

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA QFAEW+C LH QPCHV+YT++RPTPLQHY+FP  G G++LVVDEK QF+E
Sbjct: 273  FLSATIPNARQFAEWVCRLHSQPCHVIYTEYRPTPLQHYIFPASGDGIHLVVDEKGQFKE 332

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF     T L    G      +      KGGS S    IF IVKMIMER F PVI+FSF
Sbjct: 333  DNF-NTAMTVLSNAGGASAGGERGRRGGLKGGSSS----IFNIVKMIMERNFAPVIIFSF 387

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+++CE +AM M+KLDFNT EEK  V++VF NA+D L+E+DR LP +E ++PLL+RGI +
Sbjct: 388  SKKDCELYAMQMAKLDFNTIEEKKLVDEVFNNAMDVLSEDDRKLPQVENVIPLLRRGIGI 447

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE +E+LF  GL+KALFATETFAMGLNMPA+TVVFT  +K+DG   R+I S
Sbjct: 448  HHGGLLPILKETIEILFGLGLIKALFATETFAMGLNMPARTVVFTNCQKFDGKDFRFITS 507

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRG DD+GI I+M+D+++  + +K MV GK  P+ S F L+Y  +LNL+
Sbjct: 508  GEYIQMSGRAGRRGLDDKGIVILMIDQKVTPSVVKSMVQGKADPINSAFHLTYNMVLNLL 567

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E +   E++++ SF+QFQ +  +PD+  KV   ++E ++L    E  +A Y  ++  
Sbjct: 568  -RVE-EINPEYMLERSFYQFQNQAVIPDLIDKVKAKQKEYSALSIEEEHSIASYCNIRSQ 625

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV--------------- 622
            +  L  +  S IT+PE +  +L  GRL+KV+    ++ WG++VN                
Sbjct: 626  LELLGSQFRSFITKPEYIKPFLQPGRLVKVKTEKYEYDWGIIVNFKHKTGKSKKDENPLT 685

Query: 623  ------------VKKPSA-----GVGTLPSRGGGY-IVPVQLPLISTLSKIRLSVPPDLR 664
                        VKK  A      V   P   G   +VP+   LI  +S +R+  P DLR
Sbjct: 686  ADTVIVVDVLLHVKKSKADEADTNVPCPPGETGDVEVVPILHTLIYQISSLRVYYPKDLR 745

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
            P D R+S+L  + E++ RFP+G P LNP+KDMKIED    + V +I+ LE +L++HPL+ 
Sbjct: 746  PPDNRKSVLKTIGEVKKRFPEGPPLLNPIKDMKIEDSVFKECVERIKLLEERLYSHPLHN 805

Query: 725  SQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
             ++   +   +  K E+  E+   KS++R ++     DELK R RVL++LG+     V++
Sbjct: 806  DKNRGALTAAYDAKQEIYEELTLAKSELRRAKSILQMDELKKRKRVLRRLGYCTLSDVIE 865

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            LKGR AC + + DELL+TEL+FNG FN+L   Q AAL SCF+  + S++      EL   
Sbjct: 866  LKGRIACELSSADELLLTELIFNGVFNNLSAEQSAALVSCFVCDENSTQTSATGEELRGV 925

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+QLQE AR+IA++  + K++++ DEYV    +  LMDV+  W+KGA+F ++ +MTD+FE
Sbjct: 926  LRQLQEYARRIAKVSIDAKMDLDEDEYV-GKFKCTLMDVVLAWAKGASFLQICKMTDVFE 984

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L QL  AA+ +G  +LE KF+ A + L+R I+F+ SLY+
Sbjct: 985  GSIIRCMRRLEEVLRQLCQAAKNIGNTDLENKFSDAIKMLKRDIVFAASLYM 1036


>gi|358056838|dbj|GAA97188.1| hypothetical protein E5Q_03864 [Mixia osmundae IAM 14324]
          Length = 1720

 Score =  929 bits (2400), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/957 (50%), Positives = 640/957 (66%), Gaps = 45/957 (4%)

Query: 33   NLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
            +LT    H+VA+P  Y  T         ++ V + E A+TY F LDPFQ+VS+  +ERNE
Sbjct: 775  SLTHQVRHQVAIPPDYPYTP-------ISSHVQSKEPARTYPFVLDPFQQVSINSIERNE 827

Query: 93   SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGD 152
            SVLVSAHTSAGKT VAEYAIA   RDKQRVIYTSP+KALSNQKYRE+  EF DVGLMTGD
Sbjct: 828  SVLVSAHTSAGKTVVAEYAIAQCLRDKQRVIYTSPIKALSNQKYREMAAEFGDVGLMTGD 887

Query: 153  VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
            VT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D+ERGVVWEE+II LP 
Sbjct: 888  VTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERGVVWEETIILLPH 947

Query: 213  AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
             +  VFLSAT+ NA QFAEWIC +H+QPCHVVYT+FRPTPLQHY+FP GG G++LVVDE+
Sbjct: 948  KVHYVFLSATIPNAFQFAEWICKIHEQPCHVVYTEFRPTPLQHYLFPAGGEGIHLVVDER 1007

Query: 273  EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG--GSGSGGSDIFKIVKMIMERKFQ 330
              FREDNF K   +  K + G    +  A G+  K       G SDI+KI+KMIM + + 
Sbjct: 1008 GAFREDNFQKAMSSLNKGQ-GDDPSSPFARGKQGKTRKPQQKGLSDIYKIIKMIMTKNYH 1066

Query: 331  PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
            PVIVF+FS+RECE  A+ MSKL+FNT++EK  V  VF NA+  L+++DR LP IE +LPL
Sbjct: 1067 PVIVFAFSKRECESLALQMSKLEFNTEDEKAMVADVFNNAIAALSDDDRTLPQIEHILPL 1126

Query: 391  LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
            LKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFTAV+KWDG 
Sbjct: 1127 LKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTAVRKWDGT 1186

Query: 451  SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
              R +  GEYIQMSGRAGRRGKDDRGI I+M D++ME ++ K MV G    L S F L Y
Sbjct: 1187 DTRDLSGGEYIQMSGRAGRRGKDDRGIVILMCDDKMEPSSAKSMVKGVADRLDSAFHLGY 1246

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE 570
              ILNLM R EG  + E++++  F QFQ   ++P    ++ + E+E  ++    EA+VAE
Sbjct: 1247 NMILNLM-RVEG-ISPEYMLERCFFQFQSTGSVPQYEAELRQAEDEFDAIAIDREADVAE 1304

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK----- 625
            Y+ ++  +  L K L   +T P   L ++  GR++KV+    D+GW  VV+  K+     
Sbjct: 1305 YYDMRQQLMLLNKDLHDVVTHPSYALPFMQPGRVVKVQHNNLDFGWACVVDFTKRRGEKG 1364

Query: 626  --------------------PSAGVGTLPSRGGGYIVPVQLPLIST---LSKIRLSVPPD 662
                                  A     PS G      + L L+ST   +S IRL +P  
Sbjct: 1365 RELNVPAQEEFVVTVLLCCATGASEAVPPSNGDKGRFELHLVLLSTIQQISMIRLKLPTT 1424

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            L+  D RQ  L +++E+E RFP G   L+PVK+M I DP    LV +I  LE K     +
Sbjct: 1425 LKSPDQRQVALQSLREVERRFPDGFGLLDPVKNMGITDPNFQALVERIAMLESKAAKCSI 1484

Query: 723  NKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
              S    Q+   ++ K  +   I+  K K+ D+      DELKNR RVL++LG  +A+ V
Sbjct: 1485 VDSPQLQQLYGQYEAKQAIQQRIRAAKKKVSDAHSVLHLDELKNRKRVLRRLGFANAEDV 1544

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN-LRMEL 840
            V++KGR AC I TGDELL+TE++F+G FN+L   Q AAL SCF+  +KS++  N LR EL
Sbjct: 1545 VEMKGRVACEISTGDELLLTEMIFHGVFNELTPEQSAALLSCFVFDEKSNDSTNKLRTEL 1604

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
            A PL+ +QE+A++IA++  E  + ++ + YV S  +P L+D  Y W KGA F++V + TD
Sbjct: 1605 AGPLRVMQETAKRIAQVCKESHMVIDEEAYVAS-FKPELIDATYQWVKGAKFSDVSKQTD 1663

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            +FEGS+IR  RRL E + Q+ +AA+A+G   LE KF  A + L R   ++F+ SLYL
Sbjct: 1664 VFEGSLIRVFRRLGELIRQMASAAKAIGNTELETKFVDALKLLERPQSVVFNPSLYL 1720


>gi|242009954|ref|XP_002425746.1| helicase, putative [Pediculus humanus corporis]
 gi|212509650|gb|EEB13008.1| helicase, putative [Pediculus humanus corporis]
          Length = 1011

 Score =  928 bits (2399), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/956 (48%), Positives = 648/956 (67%), Gaps = 65/956 (6%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--AKTYSFELDPFQRVSVACLERNESV 94
            +C HEVAVP                 P+  G    AK Y F LD FQ  ++ C+E N+SV
Sbjct: 84   ACTHEVAVPPNQEYV-----------PLVKGNCPRAKEYKFVLDAFQEEAILCIENNQSV 132

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEY+IA + RDKQRVIYT+P+KALSNQK+RE  +EF +VGL+TGDVT
Sbjct: 133  LVSAHTSAGKTVVAEYSIAKSLRDKQRVIYTTPIKALSNQKFREFTEEFGEVGLITGDVT 192

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++ NAS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +
Sbjct: 193  INQNASLLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNV 252

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
              VFLSAT+ NA QFAEW+ HLH QPCHVVYTD+RPTPLQHY+FP GG G++LV+DE  +
Sbjct: 253  HYVFLSATIPNARQFAEWVAHLHNQPCHVVYTDYRPTPLQHYIFPAGGDGIHLVLDENGK 312

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG----SGSGGSDIFKIVKMIMERKFQ 330
            F+EDNF                   + +G  AKG     + + GS+ FKIVKMIMER F 
Sbjct: 313  FKEDNFNTAMAVL------------QNAGDAAKGDRLNRNNARGSNAFKIVKMIMERNFA 360

Query: 331  PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
            PVI FSFS+++CE +A+ M+KLDFN+ EEK  V++VF NA+D L+EEDR LP +E +LPL
Sbjct: 361  PVICFSFSKKDCEAYALQMAKLDFNSVEEKKLVDEVFNNAMDVLSEEDRKLPQVENVLPL 420

Query: 391  LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
            L+RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT  +K+DG 
Sbjct: 421  LRRGIGIHHGGLLPILKETIEILFAEGLIKALFATETFAMGLNMPARTVLFTGCRKFDGK 480

Query: 451  SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
             +R++ SGEYIQMSGRAGRRG DD+GI I+M+DEQ+  +  +++V G P P+ S F L+Y
Sbjct: 481  DYRFVTSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPSVGREIVKGAPDPINSAFHLTY 540

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE 570
              +LNL+ R E +   E++++ SF+QFQ + A+P I + V K  EE   +    E++VA 
Sbjct: 541  NMVLNLL-RVE-EINPEYMLERSFYQFQNQSAIPQIYENVKKTLEEYEKIIIPKESQVAS 598

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-------- 622
            Y  ++  +  L K+  + +T+P  +L +L  GRL+K  +   ++ WG++VN         
Sbjct: 599  YFSIREQLKDLGKQFQTFLTKPNYLLPFLQPGRLVKCED--LEFDWGMIVNYKNRENFDK 656

Query: 623  ----------------------VKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVP 660
                                   K+P        +RG   +VPV   LI+ +S IRL  P
Sbjct: 657  DNPLKSSPRLILVDILLHLDENYKEPDIRPCPKNARGSCEVVPVLHTLITHISSIRLKTP 716

Query: 661  PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAH 720
             DLR  DA++SI+  +QE++ RFP+GLP L+P+ DMKI++   +D+V +I   E +LF H
Sbjct: 717  NDLRSADAKRSIIKTIQEVKKRFPEGLPLLDPIVDMKIKEKVFLDIVKKITTFEERLFDH 776

Query: 721  PL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD 779
            PL N S   N    + +K E+  ++++ K++ + ++     +ELK R RVL+++G+  A 
Sbjct: 777  PLHNDSNLGNLFDLYSKKGELGVKLKEYKTQFKKAKSLLQMNELKCRKRVLRRMGYCTAS 836

Query: 780  GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME 839
             V++ KG+ AC + +G+ELL+TEL+FNG FNDL   Q  AL SCF+  +KSSE   L  +
Sbjct: 837  DVIETKGKIACELSSGEELLLTELIFNGVFNDLSVAQCVALLSCFVCDEKSSELPKLTDQ 896

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            L+ PL+++Q  AR+IA I  E KLE++ ++Y+ +  +P+LMDV++ W  GA F ++ QMT
Sbjct: 897  LSGPLKEMQNLARRIARISQEAKLEIDENDYI-NGFKPYLMDVMFAWCNGANFGKICQMT 955

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            DI+EGSIIR+ RRL+E L Q+  A+ ++G+ +L +KF    ++++R I+F+ SLYL
Sbjct: 956  DIYEGSIIRAMRRLEEMLRQMVQASISIGDQSLIEKFNEGIKAIKRDIVFAASLYL 1011


>gi|303274743|ref|XP_003056687.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461039|gb|EEH58332.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 979

 Score =  927 bits (2395), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 488/978 (49%), Positives = 655/978 (66%), Gaps = 66/978 (6%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           SCVH+VA+P  +   +D        NP Y+G  AK Y F LD FQ  S+A LERNESV+V
Sbjct: 9   SCVHQVAIPECWDGDRD-----ALNNPTYDGARAKAYPFVLDAFQETSIAVLERNESVMV 63

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF-----KDVGLMTG 151
           +AHTSAGKT VAEYAIAMAFRDKQRVIYTSP+KALSNQK+REL +EF      +VGLMTG
Sbjct: 64  AAHTSAGKTVVAEYAIAMAFRDKQRVIYTSPIKALSNQKFRELAEEFGGDAGAEVGLMTG 123

Query: 152 DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
           DV ++ NA+C+VMTTE+LRGMLYRGSE+++EV W+IFDE+HYM+D+ERGVVWEESII  P
Sbjct: 124 DVCINKNATCIVMTTEVLRGMLYRGSEIVREVKWIIFDEVHYMRDKERGVVWEESIIHAP 183

Query: 212 PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
              KMVFLSAT+ N+ QFA+WI  LH  PCHVVYTD RPTPLQHY FP GGSGL+L+VD+
Sbjct: 184 EGSKMVFLSATLPNSFQFAQWITRLHDHPCHVVYTDHRPTPLQHYAFPKGGSGLHLIVDD 243

Query: 272 KEQFREDNFVKLQDTF-----------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKI 320
           +  FR++N+  L +                  GG    G   G    GG  +GG DI K+
Sbjct: 244 RGNFRDENYRALSNAIDDVEAKRKAGGKGGGRGGGGRGGGRGGGAGAGGDDAGGEDISKV 303

Query: 321 VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV-DCLNEEDR 379
           + MI ++   PVI FSFSRRECE+H  ++  +DF   EEK  +  +F +A+  C+ EEDR
Sbjct: 304 MTMIKKKDMYPVICFSFSRRECEEHPKALKNVDFTNDEEKAHIRTIFNHALTQCMAEEDR 363

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
           +L A+  +LPLL++G+ +HHSGLLP++KELVE+LF E LVK LFATETFAMGLNMPAKTV
Sbjct: 364 DLDAVTKILPLLEKGVGIHHSGLLPIVKELVEILFGESLVKCLFATETFAMGLNMPAKTV 423

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKP 499
           VFT+ +K+DG   R +  GEY QMSGRAGRRGKDDRG CIIMVD+++E   L+ + LG P
Sbjct: 424 VFTSTEKFDGTEMRLLAPGEYTQMSGRAGRRGKDDRGTCIIMVDKKLEKEQLRGVCLGTP 483

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
            PL S F+L+YYSILNL+ RAEG   AE+VI+ SFHQFQ+ +A+P    ++ ++EEE  +
Sbjct: 484 QPLNSEFKLTYYSILNLLKRAEGVVNAEYVIERSFHQFQHAEAVPRHKARLVEIEEEMTA 543

Query: 560 LDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV- 618
           +    EA V  YH L+ +I+  E ++ + I  PE  + +L  GR+I+V+  G D+GWGV 
Sbjct: 544 MTHEHEAGVKAYHDLRREISACEAEMRARIVSPENAMRFLKPGRMIRVKHDGLDFGWGVV 603

Query: 619 ------------VVNVVKK--PSAGVGTL--PSRGG-----------GYIVPVQLP-LIS 650
                       VV+ + +  P A  G L   SRGG             ++PV L   + 
Sbjct: 604 VHVAADAAGNDHVVDTLLQCAPGASEGKLAPASRGGPPSRAIDPDATCEVLPVSLAECVH 663

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFP-QGLPKLNPVKDMKIEDPEVVDLVNQ 709
            LS IR+++P DLR    R+S+ LA+ EL  R+     P+++P+ DM I+D        +
Sbjct: 664 ELSAIRVTLPDDLRLRKNRESVGLALNELHQRYADDAFPRIDPIADMGIDDDAFAATAAR 723

Query: 710 IEELEHKLFAHPLNKS-----------QDENQIRCFQRKAEVNHEIQQLKSKMRD-SQIQ 757
            E LE KL      K+           ++  ++  ++++A++  E   L+SK+R  S + 
Sbjct: 724 CEALEKKLAKTTTFKALQKEKKGDEGGEETKRVALYEKRAKLEEEAATLRSKVRSLSAVG 783

Query: 758 KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           +FR ELK+R++VLK+LGH+D   VV+LKGRAAC IDT DELLVTELMFNG F  LD  Q+
Sbjct: 784 EFRKELKSRAKVLKRLGHVDDALVVKLKGRAACEIDTADELLVTELMFNGCFTRLDASQL 843

Query: 818 AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            AL S F+PV+K          L   +++L  +AR+IA +Q ECKL+++VDE+V+S  +P
Sbjct: 844 VALCSMFMPVEKVKHYTTPEA-LTPAIEELTTAAREIATLQKECKLDIDVDEFVDS-FKP 901

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            L +V++ WSKGA F +V++ TD+FEG++IR+ RRLDE + +L  AA AVG+  L KKF 
Sbjct: 902 VLCEVVFDWSKGARFDDVMKKTDLFEGTVIRALRRLDELMMELHRAACAVGDEALAKKFE 961

Query: 938 AASESLRRGIMFSNSLYL 955
             ++SLR G++F+ SLYL
Sbjct: 962 EGAKSLRHGVVFATSLYL 979


>gi|328865723|gb|EGG14109.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
          Length = 1058

 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/956 (48%), Positives = 645/956 (67%), Gaps = 47/956 (4%)

Query: 33   NLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
            ++ ++C HEV +P G      + +H     P  N   A+TY F LDPFQ  SVAC+ER E
Sbjct: 117  SMPKTCTHEVVLPPGVTSDDPDLLH---PKPPVNP--ARTYPFTLDPFQATSVACIERKE 171

Query: 93   SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGD 152
            SVLVSAHTSAGKT VAEYAIA A R  QRVIYTSP+KALSNQKYR+L++ F DVGLMTGD
Sbjct: 172  SVLVSAHTSAGKTVVAEYAIATALRSGQRVIYTSPIKALSNQKYRDLNETFGDVGLMTGD 231

Query: 153  VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
            +T+SPNASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHY++D+ERGVVWEE+II LP 
Sbjct: 232  ITISPNASCLVMTTEILRSMLYRGSELMREVAWVIFDEIHYLRDKERGVVWEETIILLPD 291

Query: 213  AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
            ++K VFLSAT+ NA +FA WI  +H QPCHVVYTD+RP PLQHY+FP GG GL+LVVDEK
Sbjct: 292  SVKFVFLSATIPNAKEFAAWIAKIHSQPCHVVYTDYRPIPLQHYIFPSGGDGLHLVVDEK 351

Query: 273  EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
              FRE+NF+K      + ++GG   N +  G      +  G +D +KIVKMIMER +QPV
Sbjct: 352  GVFREENFIKSLSGLNQPELGG---NNRKKG---PNNAKKGPNDCYKIVKMIMERNYQPV 405

Query: 333  IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
            I+FSFS+++CE +A+ MSKLDFN +EE+  VE +F NA+D L+E D++L A+  +LPLLK
Sbjct: 406  IIFSFSKKDCETYALQMSKLDFNNEEERKAVETIFNNAIDSLSESDKSLTAVVNILPLLK 465

Query: 393  RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
            RGI +HH+GLLP++KE++E+LFQ G +KALFATETF++GLNMPAKTV+FT V+K+DGD  
Sbjct: 466  RGIGIHHAGLLPILKEIIEILFQYGYIKALFATETFSIGLNMPAKTVIFTNVRKFDGDQL 525

Query: 453  RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
            R++  GEYIQMSGRAGRRG D+RGI I+MVDE+ME +  K MV G    L S+F + Y  
Sbjct: 526  RWVSGGEYIQMSGRAGRRGLDERGIVIMMVDEKMEPDVAKGMVKGVADRLTSSFWIGYSM 585

Query: 513  ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYH 572
            +LN+M R E     E ++K SFHQ+Q E  +P +  KV K+E E   +    E  V E+ 
Sbjct: 586  LLNMM-RVE-DIDPEKLLKRSFHQYQQESIIPQLTDKVQKIEAEKDQIQIKNETAVQEFF 643

Query: 573  KLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK---KPSA- 628
             LK  +A+L   +   + +P     YL  GR++K+R+   +WG+GV++N  K   KP+  
Sbjct: 644  GLKQQLAKLRDGMREFMNQPSCAQPYLTPGRVVKIRDETNEWGYGVILNFYKRQTKPNGI 703

Query: 629  ------------------GVGT---LPSR--GGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                               VG    +P+   G   IVPV L +   ++ I L +  DL  
Sbjct: 704  TDQSFEIVVDILLNCDPKAVGVPKPMPAGQVGEPQIVPVSLKMFDGITSICLVIKKDLSQ 763

Query: 666  LDARQSILLAVQELESRFPQ--GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
             D +  +  A++E E+RF +  G+P ++P++DMKI D     LV +IE LE +  +H   
Sbjct: 764  QDLKVQLFKALRETENRFKKDGGMPMIDPIEDMKITDQNFKKLVRKIESLESRFISHECY 823

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N S  E++I+  Q K E + EI++ K ++++      +++L++  R+LK+L +I  D VV
Sbjct: 824  NDSDIESRIKLVQEKMEFDKEIKECKKQIKNGDEMILKEDLRSMKRILKRLDYISQDDVV 883

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN---LRME 839
              KGR AC I  GDEL+++EL+F G FNDL   Q  A+ SCF+   +S + +    ++ E
Sbjct: 884  LTKGRVACEISAGDELIISELLFMGAFNDLTVEQCVAILSCFVFQVESEKDLTGAKVKPE 943

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            LA   + +Q++AR+IA++  ECKL+++  EY+ +   P  MD+ + W+ G++FAE+ +MT
Sbjct: 944  LAPLYRTIQDTARRIAQVSQECKLQLDEKEYL-NRFNPKYMDLTFAWASGSSFAEICKMT 1002

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            D FEG +IR  RRLDE L Q+  A++++G  +LEKKF+ A+  + R I F+ SLYL
Sbjct: 1003 DAFEGYLIRCIRRLDELLKQMATASKSIGNTDLEKKFSDATLKVHRDIPFAGSLYL 1058


>gi|331233829|ref|XP_003329575.1| hypothetical protein PGTG_11325 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
 gi|309308565|gb|EFP85156.1| hypothetical protein PGTG_11325 [Puccinia graminis f. sp. tritici CRL
            75-36-700-3]
          Length = 1059

 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/992 (49%), Positives = 664/992 (66%), Gaps = 73/992 (7%)

Query: 21   GTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPF 80
            GT EE+   +Q  L+    H+VA+P  Y      A H   + P      A+TY F LDPF
Sbjct: 84   GTGEEKP--QQLTLSHQVRHQVALPPNYNYIPISA-HRAPSKP------ARTYPFTLDPF 134

Query: 81   QRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELH 140
            Q+VS+  ++RNESVLVSAHTSAGKT VAEYAIA    +KQRVIYTSP+KALSNQKYREL 
Sbjct: 135  QQVSITSIQRNESVLVSAHTSAGKTVVAEYAIAQCLENKQRVIYTSPIKALSNQKYRELM 194

Query: 141  QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG 200
             EF DVGLMTGDVT++P+ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D+ERG
Sbjct: 195  AEFGDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERG 254

Query: 201  VVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPV 260
            VVWEE+II LP +++ VFLSAT+ NA QFAEWICH H QPCHVVYT+FRPTPLQHY+FP 
Sbjct: 255  VVWEETIILLPHSVRYVFLSATIPNAMQFAEWICHTHDQPCHVVYTNFRPTPLQHYLFPS 314

Query: 261  GGSGLYLVVDEKEQFREDNFVKLQDTFLKQK-------IGGRRENGKASGRMAKGGSGSG 313
            GG G++LVVDEK  FREDNF+K   +    +       + GR + GK      KGG+ + 
Sbjct: 315  GGDGIHLVVDEKGVFREDNFLKAMGSLNDSRGEDPASSMSGRNKQGKTK----KGGNSTK 370

Query: 314  G-SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
            G SDI+KI+KMIM + + PVIVF+FS+RECE  A+ MSKL+FN++EEK+TV+ VF+NA+ 
Sbjct: 371  GPSDIYKIIKMIMVKNYNPVIVFAFSKRECEALAIQMSKLEFNSEEEKETVDTVFKNAIS 430

Query: 373  CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
             L+E+D+ LP IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GL
Sbjct: 431  NLSEDDQALPQIEHILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGL 490

Query: 433  NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLK 492
            NMPAKTVVFT V+K+DG   R + SGEYIQMSGRAGRRG DDRGI I+M DEQ+E  T K
Sbjct: 491  NMPAKTVVFTTVRKFDGKDFRSLSSGEYIQMSGRAGRRGLDDRGIVIMMCDEQLEPATAK 550

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
            +MV G    L S F L Y  ILNLM R EG  + E++++  F QFQ    LP +  ++ +
Sbjct: 551  NMVKGDADRLDSAFHLGYNMILNLM-RVEG-VSPEYMLEKCFFQFQTHANLPLLENELRE 608

Query: 553  LEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
            L+   + +    E  +A+Y KL+ ++    +     I  P   L +L  GRL+KV+ G  
Sbjct: 609  LQRMRSKIVVPDEESIADYAKLQEELEIRNQDFRDVINHPTHALPFLQPGRLVKVKFGTM 668

Query: 613  DWGWGVVVN-------------------------VVKKPSAGVG---TLPSR-------- 636
            D+GWG VVN                         V+ K SAG       PS+        
Sbjct: 669  DFGWGCVVNFQRRLGDRGKSLGPETKPQDSFIVDVLLKISAGKSGPKQPPSKMIGGNQTS 728

Query: 637  ----------GGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG 686
                      G   +VPV L  +  +SKIR+ +  DL+P+DAR+  L AV E++ RFP G
Sbjct: 729  LVKPCEPGEEGECAVVPVLLSTLDGISKIRIFLAQDLKPMDARKGALDAVAEVKRRFPNG 788

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQ 745
            +  L+PV++M I D     L+++IE L+  +  H +   +D  +Q + +Q K +V   I+
Sbjct: 789  IGLLDPVENMGIVDETFKKLISRIENLKESIKDHKVITQEDFHDQYKLYQEKQQVYQLIK 848

Query: 746  QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
            Q+K K+ +++   + ++LK R  VL+ LG  + D +VQ+KGR AC I +GDELL+TEL+F
Sbjct: 849  QIKQKISNAENVIYIEDLKKRKTVLRSLGFCNVDDIVQVKGRVACEISSGDELLLTELIF 908

Query: 806  NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
            NG FNDL   Q AAL SCF+  +KS +   L+ EL +P+++++E+A+KIAE      +++
Sbjct: 909  NGAFNDLSPEQCAALLSCFVFTEKSEQITRLKNELEEPMKKMKEAAKKIAEEIKSAGIDI 968

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
              +EY++S  +  LMDV++ W KG+TF+E+ +MTDIFEGS+IR  RRL E + Q+  AA+
Sbjct: 969  KEEEYIDS-FKTELMDVVFHWCKGSTFSEICKMTDIFEGSLIRCFRRLQELIRQMSCAAK 1027

Query: 926  AVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            ++G   LE KF  + + L R   ++++ SLYL
Sbjct: 1028 SIGNEELETKFTQSLDCLERPSSVVYNPSLYL 1059


>gi|302791203|ref|XP_002977368.1| hypothetical protein SELMODRAFT_107227 [Selaginella moellendorffii]
 gi|300154738|gb|EFJ21372.1| hypothetical protein SELMODRAFT_107227 [Selaginella moellendorffii]
          Length = 987

 Score =  926 bits (2392), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/1003 (48%), Positives = 656/1003 (65%), Gaps = 73/1003 (7%)

Query: 7   AGKRKAPEEDLHVTGTPEEESTKKQRNLT-----RSCVHEVAVPSGYALTKDEAIHGTFA 61
           A  ++  E+DL    +P  +  K    L      R C+HE+A P G+  + ++      A
Sbjct: 4   ASTKRGAEDDL---ASPSLKQAKISETLAPAAIERGCIHEIAYPDGFQASGEK--RDAPA 58

Query: 62  NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            P      AK Y F LD FQR ++A LE  ESV+VSAHTSAGKT VAEYAIAMA RD+QR
Sbjct: 59  KP------AKEYPFTLDAFQREAIAALEAGESVMVSAHTSAGKTVVAEYAIAMALRDQQR 112

Query: 122 VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           V+YTSP+KALSNQK+REL +EF DVGLMTGDVT+SPNASCLVMTTEILR M YRGSEV++
Sbjct: 113 VLYTSPIKALSNQKFRELAEEFSDVGLMTGDVTISPNASCLVMTTEILRSMQYRGSEVMR 172

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           EVAW+IFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +H+QPC
Sbjct: 173 EVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARFVFLSATVPNAKEFADWVAKVHQQPC 232

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
           H+VYTDFRPTPLQHY+FP GG GLYLVVDE+  FRED+F K  +      I   +++GK 
Sbjct: 233 HIVYTDFRPTPLQHYIFPAGGDGLYLVVDEQGTFREDSFSKAVNAV---AIADPKKDGKW 289

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
             R  +G      SDI+KIVKMI+ R++ PVIVFSFS+R+CE  AM MSK+D N+++EK 
Sbjct: 290 QKRKEEGKDEP--SDIWKIVKMIIARQYDPVIVFSFSKRDCEHLAMQMSKMDLNSEDEKK 347

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            VE +F+NA+D L+E+D+ LP + L LP LKRGI VHHSGLLP++KE++E+LFQEGLVK 
Sbjct: 348 LVEGIFRNAMDSLSEDDKKLPQVSLALPYLKRGIGVHHSGLLPILKEVIEILFQEGLVKC 407

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETF++GLNMPAKTVVFT V+K+DGD  R+I SGEYIQMSGRAGRRG D+ G+CI M
Sbjct: 408 LFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWITSGEYIQMSGRAGRRGLDNFGVCIFM 467

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           +DE++E    K +V G   PL S F LSY  ILN M   E     E +++ SFHQFQ ++
Sbjct: 468 LDEKLEPAVAKQIVKGTADPLNSAFHLSYNMILNQMRCEES--NPEDLLRQSFHQFQSDR 525

Query: 542 ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
           +LP + ++V  LEEE AS+    E ++AEY+     + +++ ++   I  P   L +L  
Sbjct: 526 SLPILEQRVKNLEEERASVLIEEEEKLAEYYSSVNQLRKIKNQIREIILAPRSCLPFLQP 585

Query: 602 GRLIKVREGGTDWG-------------WGVVVNVVKKPSAGVGTLPSRGG--GYIV---- 642
           GRL+++                     WGV++N  K  S         G    Y+V    
Sbjct: 586 GRLVRIFRSADAVEQQNSVLMEQDPAVWGVIINFEKAQSKDSDEGKPNGAHLKYVVDVLV 645

Query: 643 ---------------PVQL-----PLIS--------TLSKIRLSVPPDLRPLDARQSILL 674
                          PV L     PL++        +LS +R+ +P DLRP +AR+  L 
Sbjct: 646 NCVTEKEGDRPKVARPVSLDEDGQPLVTAFPLSQVESLSAVRIRIPRDLRPAEAREQTLR 705

Query: 675 AVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ-IRC 733
            V E+  RFP GL  L+P  DMK+E  +   LV ++E LE  +  HP+ KS   N+ +R 
Sbjct: 706 TVLEVLKRFPDGLQLLDPEDDMKVESSDYKKLVRRVEALETLIAKHPVAKSPTLNERLRL 765

Query: 734 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
            Q+K ++   I+  + ++R +    F+DELK R RVL++L +   D VVQLKG  AC I 
Sbjct: 766 LQKKEDLAETIRVARKEVRAASALIFKDELKARRRVLRRLSYATRDDVVQLKGLVACEIS 825

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
           + DEL+VTEL+FNG F D+   Q AAL SCF+  +K+     L  ELA    QLQ++AR+
Sbjct: 826 SADELIVTELIFNGVFKDVTAEQAAALLSCFVWQEKTKMAKPLSQELAGLFSQLQDTARQ 885

Query: 854 IAEIQNECK-LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           + ++Q ECK + V+V+EYV S  RP +M+ ++ W  G +F EV+++ ++FEGS+IR+ RR
Sbjct: 886 VGKLQVECKVVPVDVEEYVNS-FRPDIMEGVHAWCTGKSFLEVLKVAEVFEGSLIRALRR 944

Query: 913 LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L+E + QL  A++A+GE ++E KF  AS  ++R I+F+ SLYL
Sbjct: 945 LEELVQQLVTASKAIGEADMEAKFQDASTKMKRDIVFAASLYL 987


>gi|343428173|emb|CBQ71703.1| probable MTR4-involved in nucleocytoplasmic transport of mRNA
            [Sporisorium reilianum SRZ2]
          Length = 1121

 Score =  924 bits (2387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/988 (50%), Positives = 640/988 (64%), Gaps = 74/988 (7%)

Query: 30   KQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLE 89
            K+ ++T S  H+VA+P  Y        +   +  V N   AK Y F LDPFQR SV+C+E
Sbjct: 146  KKMHVTHSVRHQVALPPDYP-------YVPLSQHVPNDPPAKEYKFTLDPFQRNSVSCIE 198

Query: 90   RNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLM 149
            RNESVLVSAHTSAGKT VAEYAIA   ++ QRV+YTSP+KALSNQK+REL  EF DVGLM
Sbjct: 199  RNESVLVSAHTSAGKTVVAEYAIAQCLKNGQRVVYTSPIKALSNQKFRELTAEFGDVGLM 258

Query: 150  TGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIF 209
            TGDVT++P+ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+II 
Sbjct: 259  TGDVTINPSASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEETIIL 318

Query: 210  LPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVV 269
            LP  ++ VFLSAT+ NA QFAEWI H H QPCHVVYTDFRPTPLQHY+FP GG G++LVV
Sbjct: 319  LPRKVRYVFLSATIPNAMQFAEWIAHTHAQPCHVVYTDFRPTPLQHYLFPQGGEGIHLVV 378

Query: 270  DEKEQFREDNFVKLQDTFLKQK--------IGGRRENGKASGRMAKGGSGSGGSDIFKIV 321
            DE+  FREDNF K        K         GG +  G+       G  G   SDI+KIV
Sbjct: 379  DERGTFREDNFQKAMGALADSKGEDVADPNAGGGKRRGQVKKGGNAGKKGP--SDIYKIV 436

Query: 322  KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
            KMIM + + PVIVF+FS+RECE  A+ MSKL+FNT +EK+ V  VF NA++ L+EEDR L
Sbjct: 437  KMIMVKNYNPVIVFAFSKRECEALALQMSKLEFNTDDEKEMVSTVFTNAINALSEEDRGL 496

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
            P IE +LPLL+RGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 497  PQIEHILPLLRRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVF 556

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
            TAV KWDG   R + SGE+IQMSGRAGRRG DDRGI I+M DE++E +  K MV G+   
Sbjct: 557  TAVNKWDGKEFRNLTSGEFIQMSGRAGRRGLDDRGIVIMMFDEKLEPSAAKTMVKGEADR 616

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S F L Y  ILNLM R EG  + E++++  F QFQ   ++P +  +    EE+   + 
Sbjct: 617  LNSAFHLGYNMILNLM-RVEG-ISPEYMLERCFFQFQNAASVPALEAEQKAAEEQRDLIK 674

Query: 562  ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
               E EVAEY+ +K  +  L K + + IT P  VL +L  GRL+KV     D+GWG VV+
Sbjct: 675  VEREEEVAEYYDVKHQLETLRKDVQTVITHPSYVLPFLQPGRLVKVCHEDLDFGWGAVVS 734

Query: 622  VVKK-------------PSA----------------------------------GVGTLP 634
              K+             P+A                                      LP
Sbjct: 735  YEKRLPNTPGKRGPAIDPNAPPQNHYVVDVLLHCASGSVVANSSSDKKSSKNDNATHLLP 794

Query: 635  S----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
                 +G   +VPV L  I +LS IR+ +  DLRP + R+++   + E+  RFP+G+P L
Sbjct: 795  CPEGKKGEMVVVPVLLSTIQSLSGIRIFLAKDLRPTEPRETVRKNLVEVRRRFPKGVPLL 854

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKS 749
            +P+KDMKI+D     LV +I+ L+ KL + PL K +D  ++   + +K E    +  +  
Sbjct: 855  DPIKDMKIKDESFAHLVEKIKILDDKLSSSPLRKDKDLPRLYSAYAKKQEAQEVVSGIAK 914

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            K+  +      DELK R RVL++LG   +D VV+ KGR AC I TGDELL+TE++FNG F
Sbjct: 915  KIAAAHSVLQLDELKCRKRVLRRLGFTTSDDVVEKKGRVACEISTGDELLLTEMIFNGVF 974

Query: 810  NDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 869
            NDL   Q AAL SCF+  +KS+ Q  L   LA PL+ +QE+AR+IA++  E KL +  +E
Sbjct: 975  NDLSPPQCAALLSCFVFGEKSTTQTRLNETLAAPLRIMQETARRIAKVSIESKLPLVEEE 1034

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            YV S+ +  LMD++  W  GA FAE+ +M+D+FEGSIIR  RRL E + QL  AA+A+G 
Sbjct: 1035 YV-SSFKVELMDLVMQWCNGAKFAEICKMSDVFEGSIIRCFRRLQELIRQLVQAAKAIGN 1093

Query: 930  VNLEKKFAAASESLRR--GIMFSNSLYL 955
              L  KF      L R   I+FS SLYL
Sbjct: 1094 EGLADKFEKTLAMLEREGSIIFSPSLYL 1121


>gi|443899111|dbj|GAC76442.1| nuclear exosomal RNA helicase MTR4 [Pseudozyma antarctica T-34]
          Length = 1126

 Score =  923 bits (2386), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/980 (50%), Positives = 644/980 (65%), Gaps = 61/980 (6%)

Query: 27   STKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVA 86
            + +K+ ++T S  H+VA+P  Y        +   +  V N   AK Y F LDPFQR SV+
Sbjct: 157  AAEKKMHVTHSVRHQVALPPDYP-------YVPLSQHVPNDPPAKHYKFTLDPFQRNSVS 209

Query: 87   CLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDV 146
            C+ERNESVLVSAHTSAGKT VAEYAIA   ++ QRV+YTSP+KALSNQK+REL  EF DV
Sbjct: 210  CIERNESVLVSAHTSAGKTVVAEYAIAQCLKNGQRVVYTSPIKALSNQKFRELTAEFGDV 269

Query: 147  GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEES 206
            GLMTGDVT++P+ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+
Sbjct: 270  GLMTGDVTINPSASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEET 329

Query: 207  IIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLY 266
            II LP  ++ VFLSAT+ NA QFAEWI H H QPCHVVYTDFRPTPLQHY+FP GG G++
Sbjct: 330  IILLPRKVRYVFLSATIPNAMQFAEWIAHTHAQPCHVVYTDFRPTPLQHYLFPQGGEGIH 389

Query: 267  LVVDEKEQFREDNFVKLQDTFLKQK------IGGRRENGKASGRMAKGGSGSGGSDIFKI 320
            LVVDE+  FREDNF K        K              K   +   GG   G SDI+KI
Sbjct: 390  LVVDERGTFREDNFQKAMGALADSKGEDVADPNAGGGKRKGQVKKGGGGGKKGPSDIYKI 449

Query: 321  VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
            VKMIM + + PVIVF+FS+RECE  A+ MSKL+FNT++EK+ V  VF NA++ L+EEDR 
Sbjct: 450  VKMIMVKNYNPVIVFAFSKRECEALALQMSKLEFNTEDEKEMVSTVFTNAINALSEEDRG 509

Query: 381  LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
            LP IE +LPLL+RGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVV
Sbjct: 510  LPQIEHILPLLRRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVV 569

Query: 441  FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA 500
            FTAV KWDG   R + SGE+IQMSGRAGRRG DDRGI I+M DE++E +  K MV G+  
Sbjct: 570  FTAVNKWDGKEFRNLTSGEFIQMSGRAGRRGLDDRGIVIMMFDEKLEPSAAKTMVKGEAD 629

Query: 501  PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL 560
             L S F L Y  ILNLM R EG  + E++++  F QFQ   ++P +  ++   E+E   +
Sbjct: 630  RLNSAFHLGYNMILNLM-RVEG-ISPEYMLERCFFQFQNAASVPALEAELKAAEDERDDV 687

Query: 561  DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV 620
                E EVAEY+ +K  +  L + + + +T P  VL +L  GRL+KV     D+GWG VV
Sbjct: 688  KVEREDEVAEYYDVKHQLETLRRDVQAVVTHPSYVLPFLQPGRLVKVCHDELDFGWGAVV 747

Query: 621  NVVKK-----------------------------PSAGVGT---------LPS----RGG 638
            +  K+                              +AG G          +P     +G 
Sbjct: 748  SYEKRLPNTPGKRGPAIDPNAPPQSQYVVDVLLHCAAGSGEKKGKEAAPFVPCPEGKKGE 807

Query: 639  GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
              +VPV L  +  LS IR+ +  DLRP + R+++   + E+  RFP+G+P L+P+KDMKI
Sbjct: 808  MVVVPVLLSTVEALSGIRIFLAKDLRPSEPRETVRKNLVEVRRRFPKGVPLLDPIKDMKI 867

Query: 699  EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQ 757
            +D     LV +I+ L+ KL + PL   +   Q+   + +K +    ++ +  K+  +   
Sbjct: 868  KDDAFAHLVEKIKILDEKLASSPLRTDKALPQLYAAYAKKQQAQEVVEGVAKKIAAAHSV 927

Query: 758  KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
               DELK R RVL++LG   AD VV+ KGR AC I TGDELL+TE++FNG FNDL+  Q 
Sbjct: 928  LQLDELKCRKRVLRRLGFTTADDVVEKKGRVACEISTGDELLLTEMIFNGVFNDLEPAQC 987

Query: 818  AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            AAL SCF+  +KS+ Q  L   LA PL+ +QE+AR+IA++  E KLE+  +EYV S+ + 
Sbjct: 988  AALLSCFVFGEKSTTQTRLAENLAAPLRIMQETARRIAKVSIESKLELVEEEYV-SSFKV 1046

Query: 878  FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
             LMD++  W +GA FAE+ ++TD+FEGSIIR  RRL E + QL  AA+A+G   L  KF 
Sbjct: 1047 ELMDLVLQWCQGAKFAEICKLTDVFEGSIIRCMRRLQELIRQLVQAAKAIGNEGLATKFE 1106

Query: 938  AASESLRR--GIMFSNSLYL 955
                 L R   I+FS SLYL
Sbjct: 1107 QTLAMLEREGSIIFSPSLYL 1126


>gi|330794782|ref|XP_003285456.1| hypothetical protein DICPUDRAFT_53548 [Dictyostelium purpureum]
 gi|325084631|gb|EGC38055.1| hypothetical protein DICPUDRAFT_53548 [Dictyostelium purpureum]
          Length = 1118

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/957 (48%), Positives = 641/957 (66%), Gaps = 51/957 (5%)

Query: 35   TRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
            ++SC+HEV +P G  +T DE       NP      A+ Y F+LDPFQ  SVAC+ERNESV
Sbjct: 177  SKSCIHEVLLPPG--VTNDEP---ELYNPPEPKNPARQYPFKLDPFQATSVACIERNESV 231

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            LVSAHTSAGKT VAEYAIA A R  QR IYTSP+KALSNQKYR+L + F DVGLMTGD+T
Sbjct: 232  LVSAHTSAGKTVVAEYAIATALRGGQRCIYTSPIKALSNQKYRDLQETFNDVGLMTGDIT 291

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            ++PNASCLVMTTEILR MLYRGSE ++EV+WVIFDEIHY++D+ERGVVWEE+II LP +I
Sbjct: 292  INPNASCLVMTTEILRSMLYRGSETMREVSWVIFDEIHYLRDKERGVVWEETIILLPDSI 351

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            K VFLSAT+ NA +FA WI  +HKQPCHVVYT++RP PLQHY+FP GG GL+LVVDE   
Sbjct: 352  KFVFLSATIPNAREFAAWIAKIHKQPCHVVYTEYRPIPLQHYIFPSGGDGLHLVVDENGV 411

Query: 275  FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            FRE+NF+K      + +  GR   GK   R        G SD +KIVKMIMER +QPVIV
Sbjct: 412  FREENFLKSLSNLQQTEDTGRGGRGKRQNR--------GPSDCYKIVKMIMERNYQPVIV 463

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS++ECE +A+ MSKLDFN +EEK+ VE +F NA+D L+EED+ LPA+  +LPLLKRG
Sbjct: 464  FSFSKKECELYALQMSKLDFNNEEEKNAVETIFNNAIDSLSEEDKKLPAVINILPLLKRG 523

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HH+GLLP++KE++E+LFQ G +KALFATETF++GLNMPAKTV+FT+V+K+DG+  R+
Sbjct: 524  IGIHHAGLLPILKEIIEILFQYGYIKALFATETFSIGLNMPAKTVIFTSVRKFDGEGTRW 583

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            +  GEYIQMSGRAGRRG D+RGI I+MVDE+ME    K MV G+   L S+F + Y  +L
Sbjct: 584  VTGGEYIQMSGRAGRRGLDERGIVILMVDEKMEPAVAKGMVKGQADRLTSSFWIGYSMLL 643

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            N++ R E     EH++K SFHQ+Q E  +P +  K   LE +   L    E+ V EY  +
Sbjct: 644  NMI-RVE-DIDPEHLLKRSFHQYQQEGFIPQLVAKCDDLETQKKELTIRDESVVVEYASI 701

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK---------- 624
            K  + +L + +     +   VL +L +GRL+++R+G  +WG+G+++N  K          
Sbjct: 702  KGQLQKLSEAMRDFTNQATYVLPFLNAGRLVRIRDGSVEWGYGIILNYSKRSIKSHGISD 761

Query: 625  --------------KPSAGVGTLPSR------GGGYIVPVQLPLISTLSKIRLSVPPDLR 664
                          K ++   + P        G   ++PV + L   ++ I L +  D  
Sbjct: 762  KSFEVIADVLLNCQKVTSDSSSAPKPCPPGEIGEPQVIPVSIKLFDGITSICLHINKDQD 821

Query: 665  PLDARQSILLAVQELESRFPQ--GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            P + +  +L  ++E E+RF +  GLP ++P++DMKI+DP    L+ +IE LE +  +   
Sbjct: 822  PNEFKHHLLKKLRETENRFKKEGGLPMIDPIEDMKIKDPNFKKLIRKIETLESRFASSAG 881

Query: 723  NKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
             K  D E + +  ++K +++ EI+ LK ++R       +D+L++  R+L +LG+I  DGV
Sbjct: 882  FKDSDIEERAKLLEQKNDIDKEIKSLKKQIRVGDEVILKDDLRSMKRILTRLGYITEDGV 941

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN---LRM 838
            V LKGR AC I  GDEL+++EL+F G FNDL   Q  A+ SCF+  ++S+   N   ++ 
Sbjct: 942  VALKGRVACEISAGDELVISELLFMGLFNDLTVEQCVAVFSCFVFPNESNNDPNNPKIKP 1001

Query: 839  ELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQM 898
            +L    + ++++A KI  +  ECKL    ++   ++  P  MDV + W+ GATF+E+++M
Sbjct: 1002 DLVPLFRAIKDTASKIVTVSQECKLTSMDEKTYLNSFNPNYMDVTFSWASGATFSEIVKM 1061

Query: 899  TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            T+ FEG++IR  RRLDE + Q+  AA+A+G   LE KF+ A+  ++R I F+ SLYL
Sbjct: 1062 TETFEGNLIRGIRRLDELIRQMVVAAKAIGNNELEAKFSEATIKIKRDIPFAGSLYL 1118


>gi|190348463|gb|EDK40919.2| hypothetical protein PGUG_05017 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1060

 Score =  922 bits (2382), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/965 (48%), Positives = 644/965 (66%), Gaps = 64/965 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYN---GEMAKTYSFELDPFQRVSVACLERNESVLV 96
            H+VA+P  Y              P+ +      A+TY F LDPFQ  +++C++RNESVLV
Sbjct: 111  HQVAIPPDYPYV-----------PIGDHKRANEARTYPFTLDPFQDTAISCIDRNESVLV 159

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYREL  EF DVGLMTGDVT++
Sbjct: 160  SAHTSAGKTVVAEYAIAQSLREHQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTIN 219

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+A CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ RGVVWEE+II LP  +  
Sbjct: 220  PDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKSRGVVWEETIILLPDKVHY 279

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY+FP  G G++LVVDEK  FR
Sbjct: 280  VFLSATIPNAMQFAEWIVDIHAQPCHVVYTDFRPTPLQHYLFPASGDGIHLVVDEKGTFR 339

Query: 277  EDNFVKLQDTFLKQK---IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF K   +               GK  G+  KGG   G SDI+KIVKMI  +++ PVI
Sbjct: 340  EENFQKAMASISDNSGDDPASDTSRGK-KGQTYKGGQKDGKSDIYKIVKMIYMKRYNPVI 398

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            VFSFS+R+CE  A+ MSKLDFN  EE+D + Q+F NA+  L E D+ LP I+ +LPLLKR
Sbjct: 399  VFSFSKRDCESLALKMSKLDFNNDEERDALTQIFNNAISLLPESDKELPQIKNILPLLKR 458

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+KWDG   R
Sbjct: 459  GIGIHHSGLLPILKEIIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKWDGKGFR 518

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            ++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y  I
Sbjct: 519  WVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMI 578

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNLM R EG  + E ++ +SF QFQ   ++P +  ++ KL +E  ++    E+ + EY +
Sbjct: 579  LNLM-RVEG-ISPEFMLAHSFFQFQNASSVPVMETQLRKLTDEIEAIHIDDESTIKEYFE 636

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV-------------- 619
            +   + Q ++ +   IT P  +L +L  GR++K++ G  D+GWG+V              
Sbjct: 637  INKQLQQYKEDMRQVITHPGHILPFLQPGRVVKIKVGSDDYGWGMVTSYQKRNNKRNPSD 696

Query: 620  ----------------------VNVVK--KPSAGVGTLPSRGG----GYIVPVQLPLIST 651
                                  VN++K   P    G  PS+ G       +P+ L  I  
Sbjct: 697  TYKDHESYIVTVFVCTMFVDSPVNLIKPFNPVFPEGIRPSKPGEKSRAEYIPITLDSIQA 756

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            +S +RL VP + +   A+++++  +++L  R   G+P+L+PV+ MKI+D +  +L+ +IE
Sbjct: 757  ISSVRLKVPTEFKSSSAKRNLVKTMKDLPKRLADGIPELDPVETMKIDDGDFKNLLRKIE 816

Query: 712  ELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             LE +LF++PL+ S+   ++   +  K +  +E  +L+ K+ +++     D+L++R RVL
Sbjct: 817  VLESRLFSNPLHDSERLKELYDQYDAKIKKENEANELREKILETKAVIQLDDLRHRKRVL 876

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            ++L     + +++LKGR AC I TGDELL+TEL+F+GTFN+L   Q AAL SCF+  +++
Sbjct: 877  RRLAFTTPEDIIELKGRVACEISTGDELLLTELIFSGTFNELSPEQCAALLSCFVFQERA 936

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
             E   L+ ELA+PL+ +Q+ A KIA++  ECK+E+   EYVE   RP LM+V + W KGA
Sbjct: 937  KETPRLKPELAEPLKTMQDMATKIAKVFRECKIEIVEKEYVEQ-FRPELMEVTHAWCKGA 995

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            +F ++ +MTD++EGS+IR  +RL+E L QL  AA+ +G   L++K   A+E + R I+ +
Sbjct: 996  SFTQICKMTDVYEGSLIRMFKRLEEMLRQLVTAAKTIGNQALQEKMEKATEMVHRDIVSA 1055

Query: 951  NSLYL 955
             SLYL
Sbjct: 1056 GSLYL 1060


>gi|325193485|emb|CCA27801.1| AGAP009600PA putative [Albugo laibachii Nc14]
          Length = 1100

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/954 (50%), Positives = 647/954 (67%), Gaps = 71/954 (7%)

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            G  AK Y F+LDPFQ+ +V  +  NESVLVSAHTSAGKTAVAEYAIA + RDKQRVIYTS
Sbjct: 153  GPPAKEYPFQLDPFQQAAVDFISINESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTS 212

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYR+L QEF DVGLMTGDVT++P+A+CL+MTTEILR MLYRGSE+++EVAWV
Sbjct: 213  PIKALSNQKYRDLEQEFSDVGLMTGDVTINPSATCLIMTTEILRSMLYRGSEIMREVAWV 272

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            I+DEIHYM+D+ERGVVWEESII LP  ++ VFLSAT+ N+ +FA WIC++H QPCHVVYT
Sbjct: 273  IYDEIHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAAWICYIHHQPCHVVYT 332

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL---------QDT---FLKQKIGG 294
            D+RPTPLQHYVFP GG+GL+LVVDEK +FREDNF K          QDT    +    G 
Sbjct: 333  DYRPTPLQHYVFPAGGNGLHLVVDEKGKFREDNFQKAIATLTNCVSQDTESSDMTTSGGP 392

Query: 295  RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
            RR+ GK  G  AK      GSD+++IVK+IMER++ PVIVFSFS+RECE +A+ M+KLDF
Sbjct: 393  RRKRGKTGGMSAKKKV---GSDVYRIVKLIMERQYDPVIVFSFSKRECEAYALLMAKLDF 449

Query: 355  NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
            N++ EK+ V+QVF+NA+D L+++D+ LP ++ +LPLL+RGI +HH GLLP++KE++E++F
Sbjct: 450  NSEAEKEMVDQVFRNAMDSLSDDDKTLPQVDAILPLLRRGIGIHHGGLLPILKEVIEIMF 509

Query: 415  QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
             EGL+K LFATETF+MGLNMPAKTVVFT  +K+DG   R+I SGEYIQMSGRAGRR  D 
Sbjct: 510  GEGLLKCLFATETFSMGLNMPAKTVVFTNCRKYDGKDFRWITSGEYIQMSGRAGRRSVDS 569

Query: 475  RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            RGI I M+ EQME +  K ++ G+  PL S F L Y  +LNL+ R E     E++IK SF
Sbjct: 570  RGIVIQMLSEQMEPHVAKGILYGQADPLYSAFHLGYNMLLNLL-RVEDA-NPEYMIKQSF 627

Query: 535  HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPER 594
            HQFQ E+A P + +   +   E   +    EAEVAEY+ L     +L+++ ++    P+ 
Sbjct: 628  HQFQSEQAAPALQEAAERFRSEKDQIRIKDEAEVAEYYFLSKSTVKLKERFLAIRNEPDH 687

Query: 595  VLYYLGSGRLIKV--REGGTD---------WGWGVVVNVVKK------------------ 625
            ++ +L +GRLIK+  + G  D         W WGV+VN   K                  
Sbjct: 688  LVRFLNAGRLIKLYSKPGSGDSSSDVEEEQWDWGVIVNFTTKVAKDATLARPDVTVHVLL 747

Query: 626  ----PSAG---------------VGTLPSRGGGY---IVPVQLPLISTLSKIRLSVPPDL 663
                P A                +GTL S    Y   I PV L L+ ++S +R+ +P DL
Sbjct: 748  NCQNPGASKPHESRDIGLPRPAPLGTLGSASSKYEMKICPVPLGLVDSISSLRVFIPKDL 807

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            R +++R SI  +V+E+  RFP+G P L+P++D+ IE+ E   ++ Q+ E E  +     +
Sbjct: 808  RTVESRLSIGKSVKEVLRRFPEGPPLLDPIEDLAIENEEFTQIIKQLTETEETIKLSAFH 867

Query: 724  KSQDE-NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
             ++D+  +   +  K E   +I++L+ ++RDS+    RD+L+ R R+L++L  +  DGV+
Sbjct: 868  SAKDKLTRFALYNHKMECEAKIRELERQIRDSKSPVLRDDLRRRRRILRRLEFVGKDGVI 927

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSE-QINLRMELA 841
            Q KGR AC + T DELLVTE+MFNG FN L  +++ AL SC I  +K  E Q      L 
Sbjct: 928  QRKGRTACEVSTADELLVTEMMFNGVFNQLSVNEIVALLSCLINTEKVKEGQKPPTTTLE 987

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             P++QL+E+AR+IA I  + KL +NV+EYVES     L+DV+  W +GA F+++ +MTD+
Sbjct: 988  APVRQLRETARRIANIMQDAKLSINVEEYVES-YSTTLVDVMIAWCEGAKFSQICKMTDM 1046

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            FEGS+IRS RRL+E L QL  AA  +G+V  EKKF      ++R I+F+ SLYL
Sbjct: 1047 FEGSVIRSIRRLEELLRQLTVAAHTIGDVEFEKKFEEGCRKIKRDIVFAASLYL 1100


>gi|328711657|ref|XP_001949040.2| PREDICTED: superkiller viralicidic activity 2-like 2-like
            [Acyrthosiphon pisum]
          Length = 1021

 Score =  921 bits (2381), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/953 (47%), Positives = 655/953 (68%), Gaps = 51/953 (5%)

Query: 37   SCVHEVAVPSGY---ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            SC HE+A+P  +    L +D            N + AK Y F+LDPFQ+ ++ C+E N+S
Sbjct: 86   SCTHEIALPLNFDYIPLNRDT-----------NRKPAKVYEFDLDPFQKEAIVCIENNQS 134

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEY+IA++ R+ +RVIYT+P+KALSNQKYRE H+EF DVGL+TGDV
Sbjct: 135  VLVSAHTSAGKTVVAEYSIALSLRESKRVIYTTPIKALSNQKYREFHEEFVDVGLITGDV 194

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+ASCL+MTTEILR MLYRGSE+LKEV WVIFDEIHYM+D+ERG VWEE++I LP  
Sbjct: 195  TINPSASCLIMTTEILRSMLYRGSEILKEVGWVIFDEIHYMRDKERGYVWEETLILLPDN 254

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            +++VFLSAT+ NA QFAEW+ HLH QPCHVVYT++RPTPLQHY++P GG GL+L+VDE  
Sbjct: 255  VRLVFLSATIPNARQFAEWVAHLHNQPCHVVYTEYRPTPLQHYLYPAGGEGLHLIVDENN 314

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            +FREDNF    +      +    +N     R     +    S+ FK+VKMIMER F PVI
Sbjct: 315  KFREDNFAAAMNVL--SNVTQPVKNWGQPNR-PTANNPDNESNCFKLVKMIMERNFAPVI 371

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            VFSFS+++CE +AM MSKLDF +  EK  ++++F+NA   L+EEDR LPA+  ++PL++R
Sbjct: 372  VFSFSKKDCENYAMQMSKLDFTSDTEKGLIDKLFENATKVLSEEDRKLPAVINIIPLIRR 431

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HH GLLP++KE +E+LF EGL+K L+ATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 432  GIGIHHGGLLPILKETIEILFGEGLLKVLYATETFAMGLNMPARTVLFTAPRKFDGKERR 491

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +I SGEYIQMSGRAGRRG DD+GI ++++DE++  +T++++V GKP  L S F L+Y  +
Sbjct: 492  FITSGEYIQMSGRAGRRGLDDKGIVMLIIDEKVSPDTVRNIVQGKPDSLNSAFHLTYNMV 551

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNLM R E +   E++++ SF QFQ + A+P++ +KV +L      +    E +V  Y  
Sbjct: 552  LNLM-RVE-EIDPEYMLERSFFQFQNQSAIPELVEKVKELSLNKNKIIIKNEFDVRSYFL 609

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN---VVKKPSAGV 630
            ++  +  L K+  S IT P+ ++ +   GRL+K+++   D+GWGV+VN   V+K    G 
Sbjct: 610  IRQQLEDLGKQYHSFITDPKNLVPFCNPGRLVKIKKNDVDFGWGVIVNFKSVMKSKHEGG 669

Query: 631  GT----------------------LPSRGGGY----IVPVQLPLISTLSKIRLS-VPPDL 663
            G                       +P   G      I+ ++  ++  LS +RL+ +P DL
Sbjct: 670  GIGEAILNVLLNLERSVENTEEEPIPCAPGKLGEPEIINIRHNMVEDLSSLRLNKMPNDL 729

Query: 664  RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
            +  D+R  +   V+E+  R    +P L+P+ DM I+D E   +++QIE+ E +LFAHPL+
Sbjct: 730  KSRDSRMLLYNNVKEVLQRCSTDIPLLDPINDMNIKDAEFDKVIDQIEKFESRLFAHPLH 789

Query: 724  KSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            + +D +++   +  K +V+ E+ + K++++ ++     D+LK R R+L+++G+  A  V+
Sbjct: 790  EKEDVDELYNQYLEKDKVDRELLKSKTELKKARSLMQMDDLKCRKRILRRMGYCTAGEVI 849

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            + KGR AC + + DELL+TEL+FNG FNDL   Q  AL SCF+  +KS+E      ELA 
Sbjct: 850  ETKGRIACELSSADELLMTELIFNGVFNDLSVPQTVALLSCFVCDEKSNELPAKTAELAG 909

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            PL+++QE ARKIA++  + KL++  D YVE   +PFLMDV Y W +GATF ++ QMTDIF
Sbjct: 910  PLRKMQELARKIAKVCKDAKLDIEEDSYVEG-FKPFLMDVCYEWCRGATFYQICQMTDIF 968

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGSIIR+ RRL+E L QL  A++++G  +LE KF+ + + ++R I+F+ SLYL
Sbjct: 969  EGSIIRAMRRLEEILRQLIQASKSIGNTDLENKFSESVKIVKRDIVFAASLYL 1021


>gi|385302494|gb|EIF46623.1| dead-box family helicase required for mrna export from nucleus
           [Dekkera bruxellensis AWRI1499]
          Length = 991

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/995 (47%), Positives = 651/995 (65%), Gaps = 62/995 (6%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQR-NLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNG 67
           KRK  +         + ++ KKQ+  L     H+VAVP GY              P+   
Sbjct: 11  KRKTADNGAQTLDKGBSDTDKKQKVKLKHQVRHQVAVPPGYKYI-----------PIGQH 59

Query: 68  EM---AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIY 124
           +    AKTY F+LDPFQ  S++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIY
Sbjct: 60  KRKNDAKTYPFKLDPFQDTSISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIY 119

Query: 125 TSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           T+P+KALSNQKYREL  EF DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVA
Sbjct: 120 TAPIKALSNQKYRELQAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVA 179

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           WVIFDE+HYM+D+ RGVVWEE+II LP  +  VFLSAT+ NA +FA+WIC +H QPCH+V
Sbjct: 180 WVIFDEVHYMRDKIRGVVWEETIIMLPDKVHYVFLSATIPNAMEFAQWICKIHNQPCHIV 239

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-NGKASG 303
           YTDFRPTPLQHY+FP  G G+YLVVDEK  FRE+NF +        +       N +  G
Sbjct: 240 YTDFRPTPLQHYLFPANGDGIYLVVDEKSNFREENFQRAMACITNHEGDDPGSINSRKGG 299

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
           +  KGG     SDI+KIVKMI  +K+ PVIVFSFS+R+CE  AM MSKLDFNT++EK  +
Sbjct: 300 KSWKGGVHDSKSDIYKIVKMIWMKKYNPVIVFSFSKRDCEALAMKMSKLDFNTEDEKKML 359

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
            ++F NA+D L++ED+ LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K LF
Sbjct: 360 TKIFHNAIDLLSDEDKELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLF 419

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+D
Sbjct: 420 ATETFSIGLNMPAKTVVFTSVRKWDGTEFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMID 479

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           E+ME    K M+ G+   L S F L Y  ILNL+ R EG  + E++++NSF+QFQ  +++
Sbjct: 480 EKMEPQVAKGMLKGQADRLDSAFHLGYNMILNLL-RVEG-VSPEYMMENSFYQFQKTESV 537

Query: 544 PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
           P I  ++ +L++E ++       ++ EY+ LK  + +  +     IT P  +L +L SGR
Sbjct: 538 PKIQNQIXELKDEVSASHIDHYDDIKEYYDLKEQLTRYXEDERKIITHPSHILPHLKSGR 597

Query: 604 LIKVREGGTDWGWGVVVNVVKK-------------------------------------- 625
           +I V+ G   +GW +V++  K+                                      
Sbjct: 598 IINVKVGNQKFGWAIVIDYHKRNRQRRFSENYXDHDSYLVDVFVNTMFEDAPLKLIKPFS 657

Query: 626 PSAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
           P    G  P+    +    I+P+ L  I  +S  R  +P D++   +++++  A++E+  
Sbjct: 658 PLLPSGVRPATKKEKSTIAIIPITLNSIQEISSCRSIMPKDIKNSRSQKTLDKALKEIVR 717

Query: 682 RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEV 740
           R P GLP LN +  M I D + + L  +I  L+ K+ +  +  S D E  +  + +    
Sbjct: 718 RHPNGLPILNAINKMHINDKDFLQLEKKISILKKKVSSTSIANSPDLEXLVXQYSKFVSX 777

Query: 741 NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
            + I+ L++K ++ Q     D+LK+R RVL++LG I  D VVQ+KGR AC I TGDELL+
Sbjct: 778 KNNIKILETKXKEVQSIIQLDDLKHRKRVLRRLGFISQDDVVQMKGRVACEISTGDELLL 837

Query: 801 TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
           TEL+FNG FN+L   Q AAL SCF+  ++S+E   L  ELA+PL+ L+E A KIA++  E
Sbjct: 838 TELIFNGXFNELKPEQCAALLSCFVFEERSNEVPRLTPELAEPLKTLREMATKIAKVSRE 897

Query: 861 CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           CK+++   +YVES  R  LM+V+  W KGATF ++ +MTD++EGS+IR  RRL+E + QL
Sbjct: 898 CKIDMIEKDYVES-FRYELMEVVLSWCKGATFTQICKMTDVYEGSLIRMFRRLEEMIKQL 956

Query: 921 RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             AA+ +G V LE+K   + E + R I+ + SLYL
Sbjct: 957 ADAAKTIGNVALEQKMNQSYELVHRDIVSAGSLYL 991


>gi|449545648|gb|EMD36619.1| hypothetical protein CERSUDRAFT_66166 [Ceriporiopsis subvermispora
           B]
          Length = 993

 Score =  920 bits (2377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/983 (48%), Positives = 650/983 (66%), Gaps = 65/983 (6%)

Query: 26  ESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSV 85
           E+   +  L     H+VAVP GY        +   AN V   + A+ Y F LDPFQ+VSV
Sbjct: 23  EAAGSRLELRHQVRHQVAVPPGYP-------YIPIANHVPPAKPAREYKFTLDPFQQVSV 75

Query: 86  ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
             ++RNESVLVSAHTSAGKT VAEYAIA   ++KQRVIYTSP+KALSNQKYRE+  EF D
Sbjct: 76  HAIQRNESVLVSAHTSAGKTVVAEYAIAQCLQNKQRVIYTSPIKALSNQKYREMLAEFGD 135

Query: 146 VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEE 205
           VGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE
Sbjct: 136 VGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEE 195

Query: 206 SIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGL 265
           +II LP +++ VFLSAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+FP GG G+
Sbjct: 196 TIILLPHSVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLFPAGGEGI 255

Query: 266 YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG----SDIFKIV 321
           +LVV+EK +FREDNF K     L++++G    + K+           G     SDI KI+
Sbjct: 256 FLVVNEKSEFREDNFSKAMG-MLQERMGEDPADPKSGKGKKGKSKKGGEKKGLSDIQKII 314

Query: 322 KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
           KMIM + + PVIVF+FS+RECE  A+ MSK++FNT +E+D V  +F NA+D L  +DR L
Sbjct: 315 KMIMTKNYNPVIVFAFSKRECEALALQMSKMEFNTTDEQDLVANIFNNAIDNLAPDDRQL 374

Query: 382 PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
           P I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 375 PQISNLLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVF 434

Query: 442 TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
           T  +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E    K+M+ G+   
Sbjct: 435 TTTRKFDGREFRNLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPAAAKEMIKGEADR 494

Query: 502 LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
           L S F L Y  +LNLM + EG  + E +++  F QFQ    +P +  ++ + EE+  S+ 
Sbjct: 495 LDSAFHLGYNMLLNLM-KVEG-ISPEFMLERCFFQFQNNAGVPLLEDELGREEEKKQSIV 552

Query: 562 ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
              E  V++Y+  +  + Q+       I+ P   + +L  GRL+KV+    D+GWG +VN
Sbjct: 553 VPDEESVSDYYDYRQQLDQMAADFKEVISHPTYSVPFLQPGRLVKVKHQKLDFGWGTIVN 612

Query: 622 VVKK------------------------------------------PSAGVGTLPS---- 635
             K+                                          P+ G G +P     
Sbjct: 613 YQKRLPPKNRPGPKLDDIPPHEQYIVDVLLHCSTGSTLPKDRNTTAPTPG-GVVPCQPGQ 671

Query: 636 RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKD 695
           +G   +VPV L  I  +S++R+ +P DLRPL AR++   +VQE++ RFP G+P L+P++D
Sbjct: 672 KGEPLVVPVLLSTIDAISRLRIFLPKDLRPLPARETAWKSVQEVQRRFPDGIPLLDPIQD 731

Query: 696 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDS 754
           M I+D +  +LV +I+ +E KLF+ PL+K     ++   + +K E  + I++LK +++ +
Sbjct: 732 MDIKDEKFKELVKRIDVMEKKLFSSPLHKDPRLPELYTLYAKKQESQNRIRELKKRIQAT 791

Query: 755 QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
                 +ELK R RVL++LG   +  +V +KGR AC I TGDELL+TEL+FNG FN L  
Sbjct: 792 NDILQMEELKARKRVLRRLGFTTSADIVDVKGRVACEISTGDELLLTELIFNGVFNPLSP 851

Query: 815 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
            Q A L SCF+  +KS +   L+ ELA PL+ +QE AR+IA++  E KL VN DEYV+S 
Sbjct: 852 EQCAGLLSCFVFTEKSEQVTKLKEELAAPLRVMQEYARRIAKVSKESKLTVNEDEYVQS- 910

Query: 875 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            +  LMD +  W +GA+FA++ ++TD FEG++IR  RRL E + Q+ AAA+ +G   L++
Sbjct: 911 FKVELMDAVVQWCRGASFADICKLTDQFEGNLIRVFRRLQELIRQMSAAAKVIGNTELQE 970

Query: 935 KFAAASESLRR--GIMFSNSLYL 955
           KF  ASE L R   ++F +SLYL
Sbjct: 971 KFEKASEMLERPNSVIFCSSLYL 993


>gi|413953571|gb|AFW86220.1| hypothetical protein ZEAMMB73_184778 [Zea mays]
          Length = 1000

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/965 (48%), Positives = 645/965 (66%), Gaps = 55/965 (5%)

Query: 37   SCVHEVAVPSGY--ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
            +CVH+V+ P GY  + +   AI G         E AK + F+LDPFQ  ++ CL+  ESV
Sbjct: 45   ACVHDVSYPEGYDPSASTSRAIAGG----ADASEPAKKFPFQLDPFQAEAIRCLDNGESV 100

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            +VSAHTSAGKT VA YAIAM+ R++QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT
Sbjct: 101  MVSAHTSAGKTVVALYAIAMSLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVT 160

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            + PNASCLVMTTEI R M Y+GSEV++EVAWVIFDE+HYM+DRERGVVWEESI+  P   
Sbjct: 161  IEPNASCLVMTTEIWRSMQYKGSEVMREVAWVIFDEVHYMRDRERGVVWEESIVMAPKNS 220

Query: 215  KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            + VFLSAT+ NA +FA+W+  +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVDEK +
Sbjct: 221  RFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVDEKGK 280

Query: 275  FREDNFVKLQDTFLKQKIGG-RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            FRED+F K  +  +       ++ENGK   +    G+ S  SDIFK+VKMI++R++ PVI
Sbjct: 281  FREDSFQKALNALVPASDSAKKKENGKRQ-KFTMAGTSSEESDIFKMVKMIIQRQYDPVI 339

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +FSFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP +  MLPLLKR
Sbjct: 340  LFSFSKRECEFLAMQMAKMDLNEDDEKANIETIFWSAMDMLSDDDKKLPQVSNMLPLLKR 399

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  R
Sbjct: 400  GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDRFR 459

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            ++ SGEYIQMSGRAGRRG D RGICI+MVDE+ME +T K M+ G    L S F LSY  +
Sbjct: 460  WLSSGEYIQMSGRAGRRGIDLRGICILMVDEKMEPSTAKMMLKGSADSLNSAFHLSYNML 519

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LN M   +G    E ++++SF+QFQ +++LPD+ K++ +LE E  S+       + +Y+ 
Sbjct: 520  LNQMRSEDGD--PEKLLRHSFYQFQADRSLPDLEKQIKELESERNSMVIEEAESLKDYYD 577

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD----------WGWGVVVNVV 623
            L      L+K +   +  P+ VL +L  GRL+++ E  TD            WG+++N  
Sbjct: 578  LLQQHRSLKKDVHDIVLSPKHVLPFLQPGRLVRI-EYSTDEPANFSIDENVTWGIIINFE 636

Query: 624  KKPSAG-------------------------------VGTLPSRGGGYIVPVQLPLISTL 652
            K  S G                               V  L +RG   +V + L  I  L
Sbjct: 637  KVKSHGEDKRPEDSDYTVDVLTRCSVTKDNSGKKTMKVVPLKARGEPVVVSLSLSQIDGL 696

Query: 653  SKIRLSVPPDLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIE 711
            S IR+ +P DL P++ R++ L  V+E+  RF + G+P L+P +DMK++         +IE
Sbjct: 697  SSIRMYIPKDLIPVEVRENTLRKVEEVLLRFAKDGVPLLDPEEDMKVQSKSFRKATRRIE 756

Query: 712  ELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             LE     H + N    + +++ F  K E++ +I+ +K  MR S    F+DELK R RVL
Sbjct: 757  ALESLFEKHDIRNSPHIQQKLKVFHAKQELSAKIKSIKKTMRSSTALAFKDELKARKRVL 816

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            ++LG++ +D VV++KG+ AC I + DEL +TELMF+G   D    QV AL SCF+  +K 
Sbjct: 817  RRLGYVTSDDVVEVKGKVACEISSADELTLTELMFSGALKDATVEQVVALLSCFVWQEKL 876

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
             +    R EL     QLQE+AR++A +Q ECK++++V+ +V S  RP +M+ +Y W++G+
Sbjct: 877  QDAPKPREELDLLFYQLQETARRVANLQLECKIQIDVESFVNS-FRPDIMEAVYSWARGS 935

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
             F ++++MT +FEGS+IR+ RRL+E L QL  A++++GE  LE K   A   ++R I+F+
Sbjct: 936  KFYQIMEMTQVFEGSLIRAIRRLEEVLQQLILASKSIGETELEAKLEEAVNKIKRDIVFA 995

Query: 951  NSLYL 955
             SLYL
Sbjct: 996  ASLYL 1000


>gi|452821286|gb|EME28318.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
          Length = 1062

 Score =  918 bits (2373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/981 (48%), Positives = 641/981 (65%), Gaps = 66/981 (6%)

Query: 26   ESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSV 85
            E+     +L  SC+H+V++P+ Y           F     + + AK Y F LD FQR S+
Sbjct: 97   ETCTTDSDLKTSCIHDVSLPAEYG-------EYLFEPKETSRKPAKEYKFTLDAFQRESI 149

Query: 86   ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
             CLERNESVLVSAHTSAGKTA+AEYA+AM+ RD QRVIYTSP+KALSNQKYREL++EF D
Sbjct: 150  RCLERNESVLVSAHTSAGKTAIAEYAVAMSLRDGQRVIYTSPIKALSNQKYRELYEEFID 209

Query: 146  VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEE 205
            VGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE
Sbjct: 210  VGLMTGDVTINPSAGCLVMTTEILRSMLYRGSEVIREVAWVIFDEVHYMRDKERGVVWEE 269

Query: 206  SIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGL 265
            +II +P  ++ VFLSAT+ NA +FAEWI  L  QPCH +YTD RP PLQHY+FP GG GL
Sbjct: 270  TIIMVPENVRFVFLSATIPNAREFAEWIVQLKNQPCHTIYTDSRPVPLQHYLFPAGGDGL 329

Query: 266  YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG---RMAKGGSGSGGSDIFKIVK 322
            YLVVDEK QFR+D F K        KIG       + G         +  G SD+++I+K
Sbjct: 330  YLVVDEKGQFRDDTFEKAL-----SKIGENSIKDTSKGAEMNKKNKKAAKGASDVYRIIK 384

Query: 323  MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
            +IMER++ PVIVF+FSRRECE  A+ +SKL+ NT E+K  VEQVF NA+D L+E+D+ LP
Sbjct: 385  LIMEREYDPVIVFAFSRRECEALALQLSKLELNTDEQKSLVEQVFVNAMDSLSEDDKKLP 444

Query: 383  AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
             I   LPLLKRGI +HHSGLLP++KE+ E+LFQEGL+K LFATETFAMGLNMPAKTVVFT
Sbjct: 445  QITAALPLLKRGIGIHHSGLLPILKEVTEILFQEGLIKVLFATETFAMGLNMPAKTVVFT 504

Query: 443  AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPL 502
            AV+K+DG++ R+I  GEYIQMSGRAGRRG D+RGI I+ VDE+++  T + ++ G   PL
Sbjct: 505  AVRKFDGEAFRFISGGEYIQMSGRAGRRGLDERGISILTVDERIQPETARAILKGNADPL 564

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S+F L Y  +LNL+   E     E+VI  S  QFQ ++ALPD   K+++L  +   L  
Sbjct: 565  RSSFHLEYNMLLNLLRSEEA--NPEYVISRSLAQFQADRALPDNEAKLNELLRQKDELKI 622

Query: 563  SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK--VREGGT-DWGWGVV 619
            S E +V E+   K  + +L  K+ + + + + VL +L  GRL +  V++    D+GWGVV
Sbjct: 623  SMEDDVKEFAAYKDQLERLRSKVRNIVFQAKNVLPFLQVGRLARFCVQDKEVRDFGWGVV 682

Query: 620  VNVVKKPSAGVGT--------------------------LPSRG-------GGYIVPVQL 646
            VN  K  ++ V                            +P +G          ++P  L
Sbjct: 683  VNFTKMNTSQVKEQGLRDKFLIDALVFSKPLTETNEKVFVPPKGEEDIAQASWNVLPFHL 742

Query: 647  PLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
              +  LS IR+ +P DLRP + R ++  +V E+  +FP+G+P L+PV+DM I+D E   L
Sbjct: 743  SALDGLSSIRVYMPKDLRPRENRSAVGKSVSEVMRQFPKGIPLLDPVEDMGIKDEEFRKL 802

Query: 707  VNQIEELEHKLFA-----------HPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ 755
            + Q E +E +LF+           H     +    +  +QRK ++  EI+ +K ++R  Q
Sbjct: 803  IRQAESVEDQLFSSKLAQKYSLSLHTTYPEELSRLMDSYQRKEQILVEIKAVKRQIRLGQ 862

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
                R+ELK   RVL++LG I+ + +V+ KGR AC ++T DEL++TELMF+G FN++   
Sbjct: 863  GLILREELKRMLRVLRRLGFINHENIVEKKGRTACEVNTADELVLTELMFHGAFNEIKAE 922

Query: 816  QVAALASCFIPVDKSSEQINLR-MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
               AL SCF+  +K  EQ+     EL    Q LQ  AR++  +  ECK+ ++VDEYV+S 
Sbjct: 923  VAVALLSCFVYDEKQDEQLQFSDEELKAAFQTLQNIARRVGTVTKECKIPIDVDEYVQS- 981

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
              P +M+V+Y W +GA FAE+ +MT IFEGSIIR  RRL+E L QL AAA ++G   LE 
Sbjct: 982  FDPSMMNVVYAWCRGAIFAEICKMTHIFEGSIIRCMRRLEELLRQLSAAAHSIGNEELEH 1041

Query: 935  KFAAASESLRRGIMFSNSLYL 955
             F   S+ L+R I F  SLYL
Sbjct: 1042 LFEKGSQLLKRDIAFQASLYL 1062


>gi|409075084|gb|EKM75469.1| hypothetical protein AGABI1DRAFT_46451 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1001

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 492/1002 (49%), Positives = 649/1002 (64%), Gaps = 91/1002 (9%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TGT  E  ++ +  L     H+VAVP GY  T   A H   A P       + Y FELD
Sbjct: 26   LTGTTTEAGSRLE--LRHQVRHQVAVPPGYNYTPI-AKHVPPAKP------DREYEFELD 76

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQRVSV  ++RNESVLVSAHTSAGKT VAEYAIA     KQRVIYTSP+KALSNQKYR+
Sbjct: 77   PFQRVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQCLNRKQRVIYTSPIKALSNQKYRD 136

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            + +EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 137  MLKEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 196

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWIC+ H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 197  RGVVWEETIILLPHTVRYVFLSATIPNAMQFAEWICNSHEQPCHVVYTDFRPTPLQHYLF 256

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSG-SG 313
            P GG G++LVV+EK +FREDNF K     L++  G    + KA     G+  KGG    G
Sbjct: 257  PAGGEGIFLVVNEKGEFREDNFTKAMGK-LQESAGDDPADPKAGKGRKGKSRKGGPDKKG 315

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
             SDI KIVKMIM + + PVIVFSFS+RECE  A++MSK +FN +EE+  V  +F NA+  
Sbjct: 316  SSDISKIVKMIMVKNYNPVIVFSFSKRECEGLAVNMSKFEFNNEEEQTLVADIFNNAIAN 375

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L E DR LP I  +LPLL+RG+ VHH GLLP++KE++E+LFQEGL+K LFATETF++GLN
Sbjct: 376  LAEVDRQLPQIANILPLLRRGVGVHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLN 435

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
            MPAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+MVDE++E    K 
Sbjct: 436  MPAKTVVFTAARKFDGREIRNLSSGEYIQMSGRAGRRGLDDRGVVIMMVDEKLEPVAAKA 495

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            MV G+   L S F L Y  ILNLM + EG  + E++++  F QFQ    +P + +++   
Sbjct: 496  MVKGEADRLDSAFHLGYNMILNLM-KVEG-ISPEYMLERCFFQFQSSAGIPKLAEELKHE 553

Query: 554  EEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD 613
            EE   S     E  VAEY++ +  + QL       IT P   L +L  GRL+KV+   ++
Sbjct: 554  EESKNSTVIPDEERVAEYYEYRQQLDQLNADFREVITHPTYSLPFLLPGRLVKVKYQKSE 613

Query: 614  WGWGVVVNVVKK------------------------------------------PSAGVG 631
            +GWG+V+N  K+                                           S G+ 
Sbjct: 614  FGWGIVINFQKRLPPKNRPVPESDLPPHEQYIVDVLLNCAKGSTATQGHNTLAIQSTGIE 673

Query: 632  TLP--SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
              P   +G   IVPV L  I ++S +RL VP DLR   AR+ +  +V E++ RFP GL  
Sbjct: 674  PCPPGQKGQPIIVPVLLSTIESISSLRLFVPKDLRQESAREHLWKSVLEVQGRFPNGLTL 733

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL--------------NKSQDENQIRCFQ 735
            L+PV+ M I+D +  DLV +I  LE+K+F+ PL              NK   +++IR  +
Sbjct: 734  LDPVQHMGIQDQKFKDLVKKISILENKMFSSPLHDSPQLPHLYTLYSNKRARQDKIRDLK 793

Query: 736  RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
            ++ +  H++ QL             +ELK R RVL++L   ++  +V +KGR AC I +G
Sbjct: 794  KRIQATHDVLQL-------------EELKCRKRVLRRLNFTNSADIVDMKGRVACEISSG 840

Query: 796  DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            DELL+TEL+FNG FN L     A L SCF+  +KS +Q NL+ ELA PL+ +QE AR+IA
Sbjct: 841  DELLLTELIFNGVFNSLQPEHCAGLLSCFVFAEKSEKQTNLKEELAAPLRVMQEFARRIA 900

Query: 856  EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            ++  E K+ ++ +EYV S+ +  LMD +  W +G++F ++++MTD FEGSIIR  RRL E
Sbjct: 901  KVSKESKVSIDENEYV-SSFKVELMDAVVHWCRGSSFTDILKMTDQFEGSIIRVFRRLGE 959

Query: 916  FLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
             L Q+  AA+ +G   L++KF  ASE L R   ++F +SLYL
Sbjct: 960  LLRQMAQAAKVIGNEELKEKFEKASEMLERPNSVIFCSSLYL 1001


>gi|344272294|ref|XP_003407969.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Loxodonta
           africana]
          Length = 994

 Score =  917 bits (2371), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/947 (49%), Positives = 626/947 (66%), Gaps = 97/947 (10%)

Query: 38  CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 109 CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 157

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 158 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 217

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 218 NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 277

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 278 YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 337

Query: 276 REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
           REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 338 REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 391

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 392 SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGI 451

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG      
Sbjct: 452 GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDG------ 505

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
                                               KD   G   PL S F L+Y  +LN
Sbjct: 506 ------------------------------------KDFRWGSADPLNSAFHLTYNMVLN 529

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
           L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 530 LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 587

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
             +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 588 QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 647

Query: 627 -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                              SA     P+    +G   +VPV + L++ +S +RL +P DL
Sbjct: 648 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLTAISSVRLYIPKDL 707

Query: 664 RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
           RP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 708 RPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 767

Query: 723 NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
           N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 768 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 827

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
           ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 828 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 887

Query: 843 PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
           PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+F
Sbjct: 888 PLRQMQECAKRIAKVSAEAKLEIDEESYL-SSFKPHLMDVVYTWATGATFAHICKMTDVF 946

Query: 903 EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
           EGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+ 
Sbjct: 947 EGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVL 993


>gi|388852709|emb|CCF53627.1| probable MTR4-involved in nucleocytoplasmic transport of mRNA
            [Ustilago hordei]
          Length = 1139

 Score =  916 bits (2368), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/997 (49%), Positives = 648/997 (64%), Gaps = 77/997 (7%)

Query: 24   EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRV 83
            ++ + +K+ ++T S  H+VA+P  Y        +   +  V N   AK Y F LDPFQR 
Sbjct: 155  DKNAAEKKMHVTHSVRHQVALPPDYP-------YIPLSQHVPNDPPAKEYKFTLDPFQRN 207

Query: 84   SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
            SV+C+ERNESVLVSAHTSAGKT VAEYAIA   +  QRV+YTSP+KALSNQK+REL  EF
Sbjct: 208  SVSCIERNESVLVSAHTSAGKTVVAEYAIAQCLKRGQRVVYTSPIKALSNQKFRELTAEF 267

Query: 144  KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
             DVGLMTGDVT++P+ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVW
Sbjct: 268  GDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVW 327

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EE+II LP  ++ VFLSAT+ NA QFAEWI H H QPCHVVYTDFRPTPLQHY+FP GG 
Sbjct: 328  EETIILLPRKVRYVFLSATIPNAMQFAEWIAHTHAQPCHVVYTDFRPTPLQHYLFPQGGE 387

Query: 264  GLYLVVDEKEQFREDNFVKLQDTFLKQK--------IGGRRENGKASGRMAKGGSGSGGS 315
            G++LVVDE+  FREDNF K        K         GG +  G+       G  G   S
Sbjct: 388  GIHLVVDERGTFREDNFQKAMGALADSKGEDVADPNAGGGKRCGQVKKGGNGGKKGP--S 445

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
            DI+KIVKMIM + + PVIVF+FS+RECE  A+ MSKL+FNT +EK+ V  VF NA++ L+
Sbjct: 446  DIYKIVKMIMVKNYNPVIVFAFSKRECEALALQMSKLEFNTDDEKEMVSTVFTNAINALS 505

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
            EEDR LP IE +LPLL+RGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMP
Sbjct: 506  EEDRGLPQIEHILPLLRRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMP 565

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
            AKTVVFTAV KWDG   R + SGE+IQMSGRAGRRG DDRGI I+M DE++E +  K MV
Sbjct: 566  AKTVVFTAVNKWDGKEFRNLTSGEFIQMSGRAGRRGLDDRGIVIMMFDEKLEPSAAKTMV 625

Query: 496  LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
             G+   L S F L Y  ILNLM R EG  + E++++  F QFQ   ++P +  +    EE
Sbjct: 626  KGEADRLNSAFHLGYNMILNLM-RVEG-ISPEYMLERCFFQFQNAASVPALEAEQKAAEE 683

Query: 556  EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
            +   +    E EVAEY+ +K  +  L K + + IT P  VL +L  GRL+KV     D+G
Sbjct: 684  QRDLIKVEREEEVAEYYDVKHQLETLRKDVQTVITHPSYVLPFLQPGRLVKVCHEDLDFG 743

Query: 616  WGVVVNVVKK-------------PSA----------------GVGT-------------- 632
            WG VV+  K+             P+A                G G+              
Sbjct: 744  WGAVVSYEKRLPNTPGKRGPAIDPNAPPQNQYVVDVLLHCASGPGSSSSDKDKKGGKTDN 803

Query: 633  -------LPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
                   LP     +G   +VPV L  I +LS IR+ +  DLRP + R+++   + E++ 
Sbjct: 804  GAPAGNFLPCPQGKKGEMVVVPVLLSTIQSLSGIRIFLAKDLRPTEPRETVRKNLVEVKR 863

Query: 682  RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEV 740
            RFP+G+P L+P+KDMKI+D     LV +I+ L+ KL +  L + +D  ++   + +K E 
Sbjct: 864  RFPKGVPLLDPIKDMKIKDESFAHLVEKIKILDDKLSSSSLRRDKDLPRLYAAYAQKQEA 923

Query: 741  NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
               +  +  K+  +      DELK R RVL++LG   +D VV+ KGR AC I TGDELL+
Sbjct: 924  EEIVAGIAKKIAAAHSVLQLDELKCRKRVLRRLGFTTSDDVVEKKGRVACEISTGDELLL 983

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            TE++FNG FNDL   Q AAL SCF+  +KS+ Q  L  +LA PL+ +QE+AR+IA++  E
Sbjct: 984  TEMIFNGVFNDLTPPQCAALLSCFVFGEKSTTQTRLNEQLAAPLRIMQETARRIAKVSIE 1043

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
             KL +  +EYV S+ +  LMD++  W  GA FAE+ ++TD+FEGSIIR  RRL E + QL
Sbjct: 1044 SKLPLVEEEYV-SSFKVELMDLVMQWCNGAKFAEICKLTDVFEGSIIRCMRRLQELIRQL 1102

Query: 921  RAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
              AA+A+G   L +KF      L R   I+FS SLYL
Sbjct: 1103 VQAAKAIGNEGLAEKFEKTLAMLEREGSIIFSPSLYL 1139


>gi|426193348|gb|EKV43282.1| hypothetical protein AGABI2DRAFT_77358 [Agaricus bisporus var.
            bisporus H97]
          Length = 1001

 Score =  916 bits (2367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/1002 (49%), Positives = 649/1002 (64%), Gaps = 91/1002 (9%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG   E  ++ +  L     H+VAVP GY  T   A H   A P       + Y FELD
Sbjct: 26   LTGATTEAGSRLE--LRHQVRHQVAVPPGYNYTPI-AKHVPPAKP------DREYEFELD 76

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQRVSV  ++RNESVLVSAHTSAGKT VAEYAIA     KQRVIYTSP+KALSNQKYR+
Sbjct: 77   PFQRVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQCLNRKQRVIYTSPIKALSNQKYRD 136

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            + +EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 137  MLKEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 196

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWIC+ H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 197  RGVVWEETIILLPHTVRYVFLSATIPNAMQFAEWICNSHEQPCHVVYTDFRPTPLQHYLF 256

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSGS-G 313
            P GG G++LVV+EK +FREDNF K     L++  G    + KA     G+  KGG    G
Sbjct: 257  PAGGEGIFLVVNEKGEFREDNFTKAMGK-LQESAGDDPADPKAGKGRKGKSRKGGPDKRG 315

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
             SDI KIVKMIM + + PVIVFSFS+RECE  A++MSK +FN +EE+  V  +F NA+  
Sbjct: 316  SSDISKIVKMIMVKNYNPVIVFSFSKRECEGLAVNMSKFEFNNEEEQTLVADIFNNAIAN 375

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L E DR LP I  +LPLL+RG+ VHH GLLP++KE++E+LFQEGL+K LFATETF++GLN
Sbjct: 376  LAEVDRQLPQIANILPLLRRGVGVHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLN 435

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
            MPAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+MVDE++E    K 
Sbjct: 436  MPAKTVVFTAARKFDGREIRNLSSGEYIQMSGRAGRRGLDDRGVVIMMVDEKLEPVAAKA 495

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            MV G+   L S F L Y  ILNLM + EG  + E++++  F QFQ    +P + +++   
Sbjct: 496  MVKGEADRLDSAFHLGYNMILNLM-KVEG-ISPEYMLERCFFQFQSSAGIPKLAEELKHE 553

Query: 554  EEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD 613
            EE   S   + E  VAEY++ +  + QL       IT P   L +L  GRL+KV+   ++
Sbjct: 554  EESKNSTVITDEERVAEYYEYRQQLDQLNADFREVITHPTYSLPFLLPGRLVKVKYQKSE 613

Query: 614  WGWGVVVNVVKK------------------------------------------PSAGVG 631
            +GWG+V+N  K+                                           S G+ 
Sbjct: 614  FGWGIVINFQKRLPPKNRPVPESDLPPHEQYIVDVLLNCAKGSTATQGHNTLAIQSTGIE 673

Query: 632  TLP--SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
              P   +G   IVPV L  I ++S +RL VP DLR   AR+ +  +V E++ RFP GL  
Sbjct: 674  PCPPGQKGQPIIVPVLLSTIESISSLRLFVPKDLRQESAREHLWKSVLEVQGRFPNGLTL 733

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL--------------NKSQDENQIRCFQ 735
            L+PV+ M I+D +  DLV +I  LE+K+F+ PL              NK   +++IR  +
Sbjct: 734  LDPVQHMGIQDQKFKDLVKKISILENKMFSSPLHDSPQLPHLYTLYSNKRARQDKIRDLK 793

Query: 736  RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
            ++ +  H++ QL             +ELK R RVL++L   ++  +V +KGR AC I +G
Sbjct: 794  KRIQATHDVLQL-------------EELKCRKRVLRRLNFTNSADIVDMKGRVACEISSG 840

Query: 796  DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            DELL+TEL+FNG FN L     A L SCF+  +KS +Q NL+ ELA PL+ +QE AR+IA
Sbjct: 841  DELLLTELIFNGVFNSLQPEHCAGLLSCFVFAEKSEKQTNLKEELAAPLRVMQEFARRIA 900

Query: 856  EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            ++  E K+ ++ +EYV S+ +  LMD +  W +G++F ++++MTD FEGSIIR  RRL E
Sbjct: 901  KVSKESKVSIDENEYV-SSFKVELMDAVVHWCRGSSFTDILKMTDQFEGSIIRVFRRLGE 959

Query: 916  FLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
             L Q+  AA+ +G   L++KF  ASE L R   ++F +SLYL
Sbjct: 960  LLRQMAQAAKVIGNEELKEKFEKASEMLERPNSVIFCSSLYL 1001


>gi|357110946|ref|XP_003557276.1| PREDICTED: superkiller viralicidic activity 2-like 2-like
           [Brachypodium distachyon]
          Length = 993

 Score =  916 bits (2367), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/1002 (48%), Positives = 662/1002 (66%), Gaps = 68/1002 (6%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTR------SCVHEVAVPSGY-ALTKDEAIHGTFA 61
           KRKAPE       +P +                 +CVH+V+ P GY A T    + G   
Sbjct: 5   KRKAPEVPAARANSPTKAPRDDDAPAAPAASEPVACVHDVSYPEGYDASTSSRIVAG--- 61

Query: 62  NPVYNGE---MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
                GE    AKT+ F+LDPFQ  ++ CL+  ESV+VSAHTSAGKT VA Y IAM+ R+
Sbjct: 62  ----GGEGVAPAKTFPFKLDPFQSEAIRCLDNGESVMVSAHTSAGKTVVALYVIAMSLRN 117

Query: 119 KQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE 178
           +QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT+ PNASCLVMTTEI R M Y+GSE
Sbjct: 118 QQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSE 177

Query: 179 VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK 238
           V++EVAWVIFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +HK
Sbjct: 178 VMREVAWVIFDEVHYMRDRERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHK 237

Query: 239 QPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG--RR 296
           QPCH+VYTD+RPTPLQHYVFP GG GLYLVVDE  +FRED+F K  +  L    GG  +R
Sbjct: 238 QPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVDENGKFREDSFQKSLNV-LAPASGGDKKR 296

Query: 297 ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
           ENGK    ++ G  G   SDIFK+VKMI++R++ PVI+FSFS+RECE  AM M+K+D N 
Sbjct: 297 ENGKRQKGISAGKPGE-ESDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMAKMDLNE 355

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
            +EK  +E +F +A+D L+++D+ LP +  MLPLLKRGI VHHSGLLP++KE++E+LFQE
Sbjct: 356 DDEKVNIETIFWSAMDLLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQE 415

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GL+K LFATETF++GLNMPAKTVVFT V+K+DGD  R++ SGEYIQMSGRAGRRG DDRG
Sbjct: 416 GLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDRFRWLSSGEYIQMSGRAGRRGIDDRG 475

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
           ICI+MVD++ME +T K M+ G    L S F LSY  +LN M   +G    E ++++SF+Q
Sbjct: 476 ICILMVDDKMEPSTAKMMLKGGADSLNSAFHLSYNMLLNQMRCEDGD--PEKLLRHSFYQ 533

Query: 537 FQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVL 596
           FQ ++ALPD+ K+V +LE E  S+    E  + +Y+ L      L+K +   +  P+ VL
Sbjct: 534 FQADRALPDLEKRVRELEIERNSMVIDEEESLKDYYDLLEQYKTLKKDVRDIVLSPKYVL 593

Query: 597 YYLGSGRLIKVREGGTD----------WGWGVVVNV------------------------ 622
            +L SGRL++V +  TD            WG+++N                         
Sbjct: 594 PFLQSGRLVRV-QFSTDEQPTFSIDENVTWGIIINFEKVKTQAEDRKPEDCDYAVDILTR 652

Query: 623 --VKKPSAGVGTL---PSRGGGYIVPVQLPL--ISTLSKIRLSVPPDLRPLDARQSILLA 675
             V K  +G  T+   P +  G  V + LPL  I  LS +R+ +P DL P++AR++ L  
Sbjct: 653 CSVNKDISGKKTMKIIPLKDRGEPVVISLPLSQIDGLSSVRMYIPKDLLPVEARENTLRK 712

Query: 676 VQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRC 733
           V+E+ SRF + G+P L+P +DM+++         +IE LE     H + N    + +++ 
Sbjct: 713 VEEVISRFAKDGIPLLDPEEDMEVKSSSYRKATRRIEALESLFEKHDVRNSPHIQQRLKI 772

Query: 734 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
           F  K E++ +I+ +K  MR S    F+DELK R RVL++LG+I ++ VV++KG+ AC I 
Sbjct: 773 FHAKKEISAKIKSIKKTMRASTALAFKDELKARKRVLRRLGYITSEDVVEVKGKVACEIS 832

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
           + DEL +TELMF+G   D    Q+ AL SCF+  +K  +    R EL     QLQE+AR+
Sbjct: 833 SADELTLTELMFSGALKDATVEQMVALLSCFVWQEKLQDAPKPRDELDLLFYQLQETARR 892

Query: 854 IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
           +A +Q ECK++++V+ +V S  RP +M+ +Y W++G+ F ++++MT +FEGS+IR+ RRL
Sbjct: 893 VANLQLECKIQIDVETFVNS-FRPDVMEAVYSWARGSKFHQIMEMTQVFEGSLIRAIRRL 951

Query: 914 DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +E L QL  A++++GE  LE K   A   ++R I+F+ SLYL
Sbjct: 952 EEVLQQLILASKSIGETELEAKLEEAVSKIKRDIVFAASLYL 993


>gi|19114214|ref|NP_593302.1| ATP-dependent RNA helicase, TRAMP complex subunit Mtr4
            [Schizosaccharomyces pombe 972h-]
 gi|3287946|sp|O14232.1|MTR4_SCHPO RecName: Full=ATP-dependent RNA helicase mtr4
 gi|2330862|emb|CAB11099.1| ATP-dependent RNA helicase, TRAMP complex subunit Mtr4
            [Schizosaccharomyces pombe]
          Length = 1117

 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/996 (48%), Positives = 652/996 (65%), Gaps = 71/996 (7%)

Query: 14   EEDLHVTG----TPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM 69
            E  L V G    T  + ST++   L     H+V++P  Y    D        +P+     
Sbjct: 139  EASLQVAGKVGMTEAKSSTEEVVELRHQVRHQVSIPPNY----DYVPISKHKSPI---PP 191

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+TY F LDPFQ VS+AC+ER ESVLVSAHTSAGKT VAEYA+A + RDKQRVIYTSP+K
Sbjct: 192  ARTYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVVAEYAVAQSLRDKQRVIYTSPIK 251

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYREL  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSEV++EVAWVIFD
Sbjct: 252  ALSNQKYRELLAEFGDVGLMTGDVTINPDATCLVMTTEILRSMLYRGSEVMREVAWVIFD 311

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            EIHYM+D+ERGVVWEE+II LP     VFLSAT+ NA QFAEWI  +H+QPCHVVYTDFR
Sbjct: 312  EIHYMRDKERGVVWEETIILLPDKSHFVFLSATIPNAMQFAEWITKIHRQPCHVVYTDFR 371

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
            PTPLQHY+FP G  G++LVVDEK  FRE+NF +     ++++       G     MA  G
Sbjct: 372  PTPLQHYLFPSGSDGIHLVVDEKSNFREENFQRAMSALMEKQ-------GDDPAAMATKG 424

Query: 310  SGSGG----------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
            +   G          SDI+KIVKMIM + + PVIVFSFS+RECE  A+ MSKLD N Q E
Sbjct: 425  NAKKGKTGKGGVKGPSDIYKIVKMIMVKNYNPVIVFSFSKRECEALALQMSKLDMNDQTE 484

Query: 360  KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
            +D V  +F NAV+ L+E+DR LP IE +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+
Sbjct: 485  RDLVTTIFNNAVNQLSEKDRELPQIEHILPLLRRGIGIHHSGLLPILKEVIEILFQEGLL 544

Query: 420  KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
            K LFATETF++GLNMPAKTVVFT V+K+DG + R+I  GEYIQMSGRAGRRG DDRGI I
Sbjct: 545  KVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIVI 604

Query: 480  IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
            +M+DE+M+    K M+ G+   L S F LSY  ILNL+ R EG  + E +++  F QFQ 
Sbjct: 605  LMIDEKMDPPVAKSMLKGEADRLDSAFHLSYNMILNLL-RVEG-ISPEFMLERCFFQFQN 662

Query: 540  EKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
               +P +  K+ + ++   S     E  + EYH LK  + +    + + +  P   L +L
Sbjct: 663  SLEVPKLEAKLEESQQHYDSFTILDERPLEEYHTLKTQLERYRTDVRTVVNHPNFCLSFL 722

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKP-----------------------SAGVGTLPSR 636
              GRL++V+ G  D+ WGVVVNV K+P                       ++  G L  R
Sbjct: 723  QGGRLVRVKVGNEDFDWGVVVNVSKRPLPKGQSNEYLPQESYIVHTLVMVASDTGPLRIR 782

Query: 637  GGGY---------------IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
             G                 +VP  L  +  ++ IR+ +P DL+    + ++  A+ E++ 
Sbjct: 783  SGHLPEVHPPAAEDKGKFEVVPFLLSSLDGIAHIRVFLPNDLKSQGQKLTVGKALSEVKR 842

Query: 682  RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEV 740
            RFP+G+  L+PV++M I++P  + L+ ++  LE +L ++PL N S+ E +   + RK  +
Sbjct: 843  RFPEGITLLDPVENMNIKEPTFIKLMKKVNILESRLLSNPLHNFSELEEKYAEYLRKLAL 902

Query: 741  NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
              E++ LK K+  ++     DEL +R RVL++LG   +D V+++KGR AC I +GD LL+
Sbjct: 903  LEEVKDLKKKLSKARSIMQLDELNSRKRVLRRLGFTTSDDVIEVKGRVACEISSGDGLLL 962

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKSS-EQINLRMELAKPLQQLQESARKIAEIQN 859
            TEL+FNG FNDL   Q AAL SC +  +KS  E   ++ ELA PL+ LQE AR+IA++  
Sbjct: 963  TELIFNGMFNDLTPEQCAALLSCLVFQEKSEVENQRMKEELAGPLKILQEMARRIAKVSK 1022

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            E K E+N +EYV S  +P LM+V+Y W+ GA+FA++ +MTD++EGS+IR  RRL+E + Q
Sbjct: 1023 ESKQELNEEEYVNS-FKPSLMEVVYAWAHGASFAQICKMTDVYEGSLIRMFRRLEELIRQ 1081

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  AA+ +G  +L++K       + R I+FS SLYL
Sbjct: 1082 MVDAAKVIGNTSLQQKMEDTIACIHRDIVFSASLYL 1117


>gi|392562656|gb|EIW55836.1| antiviral helicase [Trametes versicolor FP-101664 SS1]
          Length = 1063

 Score =  915 bits (2365), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/989 (49%), Positives = 651/989 (65%), Gaps = 66/989 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  +  S  + R+  R   H+VAVP GY        +   AN V   + A+ Y F LD
Sbjct: 89   LTGAVDAGSRLELRHQVR---HQVAVPPGYP-------YVPIANHVPPEKPAREYKFVLD 138

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA     KQRVIYTSP+KALSNQKYRE
Sbjct: 139  PFQQVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQCLLQKQRVIYTSPIKALSNQKYRE 198

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDE+HYM+D+E
Sbjct: 199  MLAEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEVHYMRDKE 258

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP +++ VFLSAT+ NA QFAEWIC  H+QPCH+VYTDFRPTPLQHY+F
Sbjct: 259  RGVVWEETIILLPHSVRYVFLSATIPNAMQFAEWICKSHEQPCHIVYTDFRPTPLQHYLF 318

Query: 259  PVGGSGLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGG 314
            P GG G+YLVV+EK +FREDNF K    LQDT +       +      G+  KG    G 
Sbjct: 319  PAGGEGIYLVVNEKGEFREDNFTKAMGMLQDT-MGDDPADPKAGKGRKGKTKKGTEKKGS 377

Query: 315  SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            SDI KI+KMIM + + PVIVF+FS+RECE  A+++SKL+FN+ +E+D V  +F NA++ L
Sbjct: 378  SDIQKIIKMIMLKNYNPVIVFAFSKRECEALALTLSKLEFNSTDEQDLVANIFNNAIENL 437

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
              +DR LP I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNM
Sbjct: 438  APDDRQLPQIANLLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNM 497

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
            PAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E    K+M
Sbjct: 498  PAKTVVFTAARKFDGRDFRNLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPVAAKEM 557

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            + G+   L S F L Y  +LNLM + EG  + E +++  F+QFQ    +P I  ++ K E
Sbjct: 558  IKGEADRLDSAFHLGYNMVLNLM-KVEG-ISPEFMLERCFYQFQSNAEVPVIEGELRKEE 615

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
            E   ++    E  VA Y+  +  + Q+       IT P   L +L  GRL+KV+    D+
Sbjct: 616  ELKDAIVVPDEELVASYYDFRQQLDQMAADFREVITHPNYSLPFLQPGRLVKVKHQKLDF 675

Query: 615  GWGVVVNVVKK----------------------------------PSAGVGTLPSRGG-- 638
            GWGV+VN  K+                                  P     T P+ GG  
Sbjct: 676  GWGVIVNYQKRLPPKNRPGPKPEDVPAHEQYIVDVLLYCTKGSTLPKDRNVTTPTPGGIQ 735

Query: 639  ---------GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                       +VPV L  I ++S++R+ +P DLRPL  R++   AV E++SRFP G+P 
Sbjct: 736  PCLAGRGGEPLVVPVTLSTIDSISRLRIFMPKDLRPLQQRETTWKAVLEVQSRFPTGIPL 795

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLK 748
            L+P+ DMKI D +  +LV +I+ +E K+F+  L+      ++   + RK E    I++L+
Sbjct: 796  LDPIADMKITDAKFKELVQKIDTMEKKMFSSTLHSDPRLPELYTLYARKQEHQARIRELR 855

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
             +++ ++     +ELK R RVL++LG  +A  +V +KGR AC I TGDELL+TEL+FNG 
Sbjct: 856  KRVQATEDVLQMEELKCRKRVLRRLGFTNASDIVDMKGRVACEISTGDELLLTELIFNGV 915

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            FN L   Q A L SCF+  +KS +   L+ ELA PL+ +QE AR+IA++  E KL VN D
Sbjct: 916  FNTLTPEQCAGLLSCFVFTEKSEQVTKLKEELAAPLRVMQEIARRIAKVSKESKLPVNED 975

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            EYV+S  +  LMD +  W +GA+F+++ ++TD FEGS+IR  RRL E + Q+  AA+ +G
Sbjct: 976  EYVQS-FKVELMDAVVQWCRGASFSDICKLTDQFEGSLIRVFRRLQELIRQMAQAAKVIG 1034

Query: 929  EVNLEKKFAAASESLRR--GIMFSNSLYL 955
               L++KF  ASE L R   ++F +SLYL
Sbjct: 1035 NNELQEKFEKASEMLERPNSVIFCSSLYL 1063


>gi|413953570|gb|AFW86219.1| hypothetical protein ZEAMMB73_184778 [Zea mays]
          Length = 1004

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/969 (48%), Positives = 645/969 (66%), Gaps = 59/969 (6%)

Query: 37   SCVHEVAVPSGY--ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
            +CVH+V+ P GY  + +   AI G         E AK + F+LDPFQ  ++ CL+  ESV
Sbjct: 45   ACVHDVSYPEGYDPSASTSRAIAGG----ADASEPAKKFPFQLDPFQAEAIRCLDNGESV 100

Query: 95   LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
            +VSAHTSAGKT VA YAIAM+ R++QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT
Sbjct: 101  MVSAHTSAGKTVVALYAIAMSLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVT 160

Query: 155  LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
            + PNASCLVMTTEI R M Y+GSEV++EVAWVIFDE+HYM+DRERGVVWEESI+  P   
Sbjct: 161  IEPNASCLVMTTEIWRSMQYKGSEVMREVAWVIFDEVHYMRDRERGVVWEESIVMAPKNS 220

Query: 215  KMVFLSATMSNATQFAEWIC----HLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            + VFLSAT+ NA +FA+W+      +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVD
Sbjct: 221  RFVFLSATVPNAKEFADWVAKVCSQVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVD 280

Query: 271  EKEQFREDNFVKLQDTFLKQKIGG-RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKF 329
            EK +FRED+F K  +  +       ++ENGK   +    G+ S  SDIFK+VKMI++R++
Sbjct: 281  EKGKFREDSFQKALNALVPASDSAKKKENGKRQ-KFTMAGTSSEESDIFKMVKMIIQRQY 339

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             PVI+FSFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP +  MLP
Sbjct: 340  DPVILFSFSKRECEFLAMQMAKMDLNEDDEKANIETIFWSAMDMLSDDDKKLPQVSNMLP 399

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LLKRGI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DG
Sbjct: 400  LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 459

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
            D  R++ SGEYIQMSGRAGRRG D RGICI+MVDE+ME +T K M+ G    L S F LS
Sbjct: 460  DRFRWLSSGEYIQMSGRAGRRGIDLRGICILMVDEKMEPSTAKMMLKGSADSLNSAFHLS 519

Query: 510  YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
            Y  +LN M   +G    E ++++SF+QFQ +++LPD+ K++ +LE E  S+       + 
Sbjct: 520  YNMLLNQMRSEDGD--PEKLLRHSFYQFQADRSLPDLEKQIKELESERNSMVIEEAESLK 577

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD----------WGWGVV 619
            +Y+ L      L+K +   +  P+ VL +L  GRL+++ E  TD            WG++
Sbjct: 578  DYYDLLQQHRSLKKDVHDIVLSPKHVLPFLQPGRLVRI-EYSTDEPANFSIDENVTWGII 636

Query: 620  VNVVKKPSAG-------------------------------VGTLPSRGGGYIVPVQLPL 648
            +N  K  S G                               V  L +RG   +V + L  
Sbjct: 637  INFEKVKSHGEDKRPEDSDYTVDVLTRCSVTKDNSGKKTMKVVPLKARGEPVVVSLSLSQ 696

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLV 707
            I  LS IR+ +P DL P++ R++ L  V+E+  RF + G+P L+P +DMK++        
Sbjct: 697  IDGLSSIRMYIPKDLIPVEVRENTLRKVEEVLLRFAKDGVPLLDPEEDMKVQSKSFRKAT 756

Query: 708  NQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             +IE LE     H + N    + +++ F  K E++ +I+ +K  MR S    F+DELK R
Sbjct: 757  RRIEALESLFEKHDIRNSPHIQQKLKVFHAKQELSAKIKSIKKTMRSSTALAFKDELKAR 816

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++LG++ +D VV++KG+ AC I + DEL +TELMF+G   D    QV AL SCF+ 
Sbjct: 817  KRVLRRLGYVTSDDVVEVKGKVACEISSADELTLTELMFSGALKDATVEQVVALLSCFVW 876

Query: 827  VDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
             +K  +    R EL     QLQE+AR++A +Q ECK++++V+ +V S  RP +M+ +Y W
Sbjct: 877  QEKLQDAPKPREELDLLFYQLQETARRVANLQLECKIQIDVESFVNS-FRPDIMEAVYSW 935

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            ++G+ F ++++MT +FEGS+IR+ RRL+E L QL  A++++GE  LE K   A   ++R 
Sbjct: 936  ARGSKFYQIMEMTQVFEGSLIRAIRRLEEVLQQLILASKSIGETELEAKLEEAVNKIKRD 995

Query: 947  IMFSNSLYL 955
            I+F+ SLYL
Sbjct: 996  IVFAASLYL 1004


>gi|449505096|ref|XP_004162375.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
           2-like 2-like [Cucumis sativus]
          Length = 993

 Score =  913 bits (2359), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/966 (47%), Positives = 644/966 (66%), Gaps = 54/966 (5%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+V+ P G       +   +    +   E AK + F LDPFQ  ++ CLE  ESV+V
Sbjct: 35  ACLHDVSYPEGSFNPLPSSSLSSTGEEL---EPAKVFPFSLDPFQSEAIKCLETGESVMV 91

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT VA YAIAM+ R+KQRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT+ 
Sbjct: 92  SAHTSAGKTVVALYAIAMSLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTID 151

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           PNASCLVMTTEI R M Y+GSEV +EVAW+IFDE+HYM+DRERGVVWEESI+  P   + 
Sbjct: 152 PNASCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARF 211

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA +FA+W+  +H QPCH+VYTD+RPTPLQHY+FP G  GLYLVVDEK  FR
Sbjct: 212 VFLSATVPNAKEFADWVAKVHHQPCHIVYTDYRPTPLQHYIFPSGSEGLYLVVDEKGHFR 271

Query: 277 EDNFVKLQDTFLKQKIGG-RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
           ED+F K  +  +    G  ++ENGK    +  G +G   SDIFK+VKMI++R++ PVI+F
Sbjct: 272 EDSFQKALNALVPVSDGDKKKENGKWQKSLTLGKTGE-DSDIFKMVKMIIQRQYDPVILF 330

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SFS+RECE  AM M+KLD N  +EK  +E +F +A+D L+++D+ LP +  MLPLLKRGI
Sbjct: 331 SFSKRECEFLAMQMAKLDLNGDDEKVNIETIFWSAMDMLSDDDKKLPQVSNMLPLLKRGI 390

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF+ V+K+DGD  R++
Sbjct: 391 GVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRWL 450

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEYIQMSGRAGRRG D RGICI+MVDE++E +T K M+ G    L S F LSY  +LN
Sbjct: 451 SSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLLN 510

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            +   +G    E++++NSF+QFQ ++ +P++ K+V  LEEE  S+    E  +  Y+ L 
Sbjct: 511 QIRSEDG--NPENLLRNSFYQFQADRNIPNLEKQVKSLEEERDSIVIEEEDSLKNYYDLL 568

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-----------WGWGVVVNVVK 624
                L+K + + +  P   L +L  GRL+ +     D             WG+++N  +
Sbjct: 569 NQYKSLKKDIRNIVLSPRYCLPFLQPGRLVSIECNRNDEISSTFSIKDQVTWGLIINFQR 628

Query: 625 -----------KPSA----------------GVGT-------LPSRGGGYIVPVQLPLIS 650
                      KP +                G+G        L   G  ++V + +  I+
Sbjct: 629 VKGVSEEDASMKPESANYTVDVLTRCIVSKDGIGKKNVRIIQLKEHGEPHVVSIPISQIN 688

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
           TL+ IR+ +P DL PL+AR++ L  + E+ SRFP+G+P L+P +DMKI+       V + 
Sbjct: 689 TLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRRT 748

Query: 711 EELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
           E LE     H + KS   E +++    K E+  +I+ +K ++R S +  F+DELK R RV
Sbjct: 749 EALESLFDKHEVAKSTLVEEKLKALHLKQELTAKIRSIKKQLRSSSVLAFKDELKARKRV 808

Query: 770 LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
           L++LG+  +D VV+LKG+ AC I + +EL ++ELMFNG F D    ++ AL SCF+  +K
Sbjct: 809 LRRLGYTTSDDVVELKGKVACEISSANELTLSELMFNGVFKDTKVEEIVALLSCFVWQEK 868

Query: 830 SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
             +    R EL     QLQ++AR++A++Q ECK+E++V+ +V S+ RP +M+ +Y W+KG
Sbjct: 869 LQDAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFV-SSFRPDIMEAVYAWAKG 927

Query: 890 ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
           + F E++++T +FEGS+IR+ RRL+E L QL  A++++GE  LE KF  A   ++R I+F
Sbjct: 928 SKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILASKSIGETELETKFEEAVSKIKRDIVF 987

Query: 950 SNSLYL 955
           + SLYL
Sbjct: 988 AASLYL 993


>gi|392586720|gb|EIW76056.1| antiviral helicase [Coniophora puteana RWD-64-598 SS2]
          Length = 1041

 Score =  912 bits (2358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/987 (49%), Positives = 646/987 (65%), Gaps = 64/987 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  EE S  + R+  R   H+VAVP  Y+       H   A P      A+TY F LD
Sbjct: 69   LTGAVEEGSRLELRHQVR---HQVAVPPAYSYIPISQ-HVPPAKP------ARTYKFTLD 118

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA    +KQRVIYTSP+KALSNQKYRE
Sbjct: 119  PFQQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLDNKQRVIYTSPIKALSNQKYRE 178

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            L  +F DVGLMTGDVT++P+ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D+E
Sbjct: 179  LLADFGDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKE 238

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP +++ VFLSAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 239  RGVVWEETIILLPHSVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLF 298

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG---- 314
            P GG G+YLVV+EK +FREDNF K     L+ K+G    + K+           G     
Sbjct: 299  PAGGEGIYLVVNEKGEFREDNFTKAMG-LLQDKMGEDPADPKSGKNRKGKTKKGGDKKGP 357

Query: 315  SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            SDI KI+KMIM + + PVIVF+FS+RECE  A++M K +FNT +E++ V  +F NA++ L
Sbjct: 358  SDISKIIKMIMLKNYNPVIVFAFSKRECEALALTMVKFEFNTADEQELVANIFTNAIENL 417

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
            +  DR L  IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNM
Sbjct: 418  SPADRQLAQIENLLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNM 477

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
            PAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E    K+M
Sbjct: 478  PAKTVVFTAARKFDGQEFRNLASGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPAAAKEM 537

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            + G+   L S F L Y  +LNLM + EG  + E++++  F QFQ    +P +   +   E
Sbjct: 538  IKGEANRLDSAFHLGYNMVLNLM-KVEG-ISPEYMLERCFFQFQSSAGIPLLQGDLEAEE 595

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
             + + +    E +VAEY++ +  +  + +   + IT P   L +L  GRL+KV+    D+
Sbjct: 596  RKLSEMVVPDEKQVAEYYEYRQKLESMGEDFRTVITHPSYSLPFLQPGRLVKVKYKKLDF 655

Query: 615  GWGVVVNVVKK---------------------------PS--------------AGVGTL 633
            GWGV+VN  K+                           P+              AGV   
Sbjct: 656  GWGVIVNYQKRTHPKGEVSLEPIPPHEQYVVDVLLNCAPASSIPKDRNVTTATPAGVQPC 715

Query: 634  P--SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN 691
            P   +G   +VP+ L  I  +S IRL +P DLRP  AR+++  +V E++ RFP G+  L+
Sbjct: 716  PPGEKGTPLVVPILLSTIHGISHIRLFLPKDLRPEAARETVWKSVGEVQRRFPDGIALLD 775

Query: 692  PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSK 750
            P+++M I+D +  +LV +IE  E ++FA PL+K     ++   +  K E    ++ LKSK
Sbjct: 776  PIQNMDIKDDKFKELVKRIESTERQMFASPLHKDPRLPELYSLYSTKEETRARVRALKSK 835

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
            + ++       ELK R RVL+KLG   AD +V +KGR AC I TGDELL+TEL+FNG FN
Sbjct: 836  ISETYDVLQLHELKCRKRVLRKLGFTSADDIVDMKGRVACEISTGDELLLTELIFNGAFN 895

Query: 811  DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
             L   Q A+L SCF+  +KS +Q  L  ELA PL+ +QE AR+IA++  E  L +  DEY
Sbjct: 896  SLLPEQCASLLSCFVFTEKSEKQTKLGEELAAPLRVMQELARRIAKVAKESNLPIQEDEY 955

Query: 871  VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
            V S+ +  LMD +  W +GA+FA++ ++TD FEG++IR  RRL E L Q+  AA+ +G  
Sbjct: 956  V-SSFKVELMDSVMQWCRGASFADICKLTDQFEGNLIRVFRRLGELLRQMAQAAKVIGNA 1014

Query: 931  NLEKKFAAASESLRR--GIMFSNSLYL 955
             LE KF  ASE L R   ++F +SLYL
Sbjct: 1015 ELEDKFNQASEMLERPNSVIFCSSLYL 1041


>gi|409043841|gb|EKM53323.1| hypothetical protein PHACADRAFT_259600 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1076

 Score =  912 bits (2356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/968 (48%), Positives = 647/968 (66%), Gaps = 63/968 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+VAVP GY        +   AN V   + A+ Y F LDPFQ+VSV  ++RNESVLVSAH
Sbjct: 120  HQVAVPPGYP-------YIPIANHVPPAKPAREYKFTLDPFQQVSVHAIQRNESVLVSAH 172

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA   ++KQRVIYTSP+KALSNQKYRE+  EF DVGLMTGDVT++P+A
Sbjct: 173  TSAGKTVVAEYAIARCLQNKQRVIYTSPIKALSNQKYREMLAEFGDVGLMTGDVTINPSA 232

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
            +CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ERGVVWEE+II LP  ++ VFL
Sbjct: 233  TCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKERGVVWEETIILLPHTVRYVFL 292

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+FP GG G+YLVV+EK +FREDN
Sbjct: 293  SATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLFPAGGEGIYLVVNEKGEFREDN 352

Query: 280  FVKLQDTFLKQKIGGRREN----GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            F K     L+++ G    +        G+  KGG   G SDI KI++MIM++ + PVI+F
Sbjct: 353  FTKAMG-MLQERQGEDPADPKGGRGRKGKTKKGGDKKGPSDIQKIIRMIMQKNYNPVIIF 411

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            +FS+RECE  A++M+K +FN+ +E+D V  +F NA+D L+ +DR LP I  +LPLLKRGI
Sbjct: 412  AFSKRECEALALTMTKFEFNSTDEQDMVTNIFNNAIDNLSADDRQLPQISNLLPLLKRGI 471

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFTA +K+DG   R +
Sbjct: 472  GIHHGGLLPILKEVIEILFQEGLIKILFATETFSIGLNMPAKTVVFTAARKFDGREFRNL 531

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRG+ I+M DE++E    K+M+ G+   L S F L Y  +LN
Sbjct: 532  SSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPTAAKEMIKGEADRLDSAFHLGYNMVLN 591

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            LM + EG  + E++++  F QFQ    +P +  ++ + E++ AS+  S E  V+EY++ +
Sbjct: 592  LM-KVEG-ISPEYMLERCFLQFQSNAGVPVLEDELRREEQKKASIVVSDEELVSEYYEYR 649

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS-------- 627
              + Q+       IT P   L +L  GRL+K++    D+GWGV++N  K+ S        
Sbjct: 650  QQLDQMAADFREVITHPSYSLPFLQPGRLVKIKYQDLDFGWGVIINYQKRQSPKNRPTPV 709

Query: 628  ------------------AGVGTLP-------------------SRGGGYIVPVQLPLIS 650
                              A  GTLP                    +G   +VPV L  + 
Sbjct: 710  AEDVPPHEQYVVDVLLNCAFGGTLPKDRATTTPTPAGILPCPPGQKGDPQVVPVLLSTLE 769

Query: 651  TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
            ++S +R+ +P D+R   AR+++   +QE+  RFP G+P L+PV++M I D +   LV +I
Sbjct: 770  SISHLRVHLPKDIRSSQARETVWKTIQEVHRRFPDGIPLLDPVQNMHITDDKFKQLVKKI 829

Query: 711  EELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
            E +E K+F+  L+K     ++   +++K      +++LK K++ +      +ELK R RV
Sbjct: 830  EIMEQKMFSSSLHKDPRLPELYTLYKQKVSSQERMRELKRKIQATHDVLQMEELKARKRV 889

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            L++LG   +  +V +KGR AC I TGDELL+TEL+FNG FN L   Q A L SCF+  +K
Sbjct: 890  LRRLGFTSSADIVDMKGRVACEISTGDELLLTELIFNGAFNTLSPEQSAGLLSCFVFTEK 949

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            S +Q  L+ ELA PL+ +QE AR+IA++  E KL +  DEYV+S  +  LMD +  W +G
Sbjct: 950  SEQQTRLKEELAAPLRVMQEIARRIAKVSKESKLPIVEDEYVQS-FKVELMDAVVQWCRG 1008

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR--GI 947
            A+F+E+ ++TD FEGS+IR  RRL E + Q+  AA+ +G   L++KF  ASE L R   +
Sbjct: 1009 ASFSEICKLTDQFEGSLIRVFRRLQELIRQMSQAAKVIGNTELQEKFDKASEMLERPNSV 1068

Query: 948  MFSNSLYL 955
            +F +SLYL
Sbjct: 1069 IFCSSLYL 1076


>gi|146414183|ref|XP_001483062.1| hypothetical protein PGUG_05017 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1060

 Score =  912 bits (2356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/965 (47%), Positives = 641/965 (66%), Gaps = 64/965 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYN---GEMAKTYSFELDPFQRVSVACLERNESVLV 96
            H+VA+P  Y              P+ +      A+TY F LDPFQ  +++C++RNE VLV
Sbjct: 111  HQVAIPPDYPYV-----------PIGDHKRANEARTYPFTLDPFQDTAISCIDRNELVLV 159

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYREL  EF DVGLMTGDVT++
Sbjct: 160  SAHTSAGKTVVAEYAIAQSLREHQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTIN 219

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+A CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ RGVVWEE+II LP  +  
Sbjct: 220  PDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKSRGVVWEETIILLPDKVHY 279

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY+FP  G G++LVVDEK  FR
Sbjct: 280  VFLSATIPNAMQFAEWIVDIHAQPCHVVYTDFRPTPLQHYLFPASGDGIHLVVDEKGTFR 339

Query: 277  EDNFVKLQDTFLKQK---IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            E+NF K   +               GK  G+  KGG   G  DI+KIVKMI  +++ PVI
Sbjct: 340  EENFQKAMASISDNSGDDPASDTSRGK-KGQTYKGGQKDGKLDIYKIVKMIYMKRYNPVI 398

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            VFSFS+R+CE  A+ MSKLDFN  EE+D + Q+F NA+  L E D+ LP I+ +LPLLKR
Sbjct: 399  VFSFSKRDCESLALKMSKLDFNNDEERDALTQIFNNAISLLPESDKELPQIKNILPLLKR 458

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+KWDG   R
Sbjct: 459  GIGIHHSGLLPILKEIIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKWDGKGFR 518

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            ++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y  I
Sbjct: 519  WVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMI 578

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNLM R EG  + E ++ +SF QFQ   ++P +  ++ KL +E  ++    E+ + EY +
Sbjct: 579  LNLM-RVEG-ISPEFMLAHSFFQFQNASSVPVMETQLRKLTDEIEAIHIDDESTIKEYFE 636

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV-------------- 619
            +   + Q ++ +   IT P  +L +L  GR++K++ G  D+GWG+V              
Sbjct: 637  INKQLQQYKEDMRQVITHPGHILPFLQPGRVVKIKVGSDDYGWGMVTSYQKRNNKRNPSD 696

Query: 620  ----------------------VNVVK--KPSAGVGTLPSRGG----GYIVPVQLPLIST 651
                                  VN++K   P    G  PS+ G       +P+ L  I  
Sbjct: 697  TYKDHELYIVTVFVCTMFVDSPVNLIKPFNPVFPEGIRPSKPGEKSRAEYIPITLDSIQA 756

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            +S +RL VP + +   A+++++  +++L  R   G+P+L+PV+ MKI+D +  +L+ +IE
Sbjct: 757  ISSVRLKVPTEFKLSSAKRNLVKTMKDLPKRLADGIPELDPVETMKIDDGDFKNLLRKIE 816

Query: 712  ELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             LE +LF++PL+ S+   ++   +  K +  +E  +L+ K+ +++     D+L++R RVL
Sbjct: 817  VLESRLFSNPLHDSERLKELYDQYDAKIKKENEANELREKILETKAVIQLDDLRHRKRVL 876

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            ++L     + +++LKGR AC I TGDELL+TEL+F+GTFN+L   Q AAL SCF+  +++
Sbjct: 877  RRLAFTTPEDIIELKGRVACEISTGDELLLTELIFSGTFNELSPEQCAALLSCFVFQERA 936

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
             E   L+ ELA+PL+ +Q+ A KIA++  ECK+E+   EYVE   RP LM+V + W KGA
Sbjct: 937  KETPRLKPELAEPLKTMQDMATKIAKVFRECKIEIVEKEYVEQ-FRPELMEVTHAWCKGA 995

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            +F ++ +MTD++EGS+IR  +RL+E L QL  AA+ +G   L++K   A+E + R I+ +
Sbjct: 996  SFTQICKMTDVYEGSLIRMFKRLEEMLRQLVTAAKTIGNQALQEKMEKATEMVHRDIVSA 1055

Query: 951  NSLYL 955
              LYL
Sbjct: 1056 GLLYL 1060


>gi|430811605|emb|CCJ30916.1| unnamed protein product [Pneumocystis jirovecii]
          Length = 1052

 Score =  911 bits (2354), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/961 (49%), Positives = 644/961 (67%), Gaps = 52/961 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        +   +  V   E A+ Y FELDPFQ+V++A +E+NES
Sbjct: 97   LSHQVRHQVALPVNYN-------YIPISQHVPPAEPARKYEFELDPFQKVAIASIEKNES 149

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT +AEYAIA + RDKQRVIYTSP+KALSNQKYREL  EF DVGLMTGDV
Sbjct: 150  VLVSAHTSAGKTVIAEYAIAQSLRDKQRVIYTSPIKALSNQKYRELLSEFGDVGLMTGDV 209

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T+SPN+SCLVMTTEILR MLYRGSEV++E+AWVIFDEIHYM+D+ERGVVWEE+II LP  
Sbjct: 210  TISPNSSCLVMTTEILRSMLYRGSEVMREMAWVIFDEIHYMRDKERGVVWEETIILLPDK 269

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            +  VFLSAT+ NA QFAEWIC  H QPCHVVYTDFRPTPLQHY+FP  G G++LVVDEK 
Sbjct: 270  VHYVFLSATIPNAMQFAEWICKTHVQPCHVVYTDFRPTPLQHYIFPADGDGIHLVVDEKG 329

Query: 274  QFREDNFVKLQDTFLKQKIG--GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
             FREDNF K   + L +K              +     S  G SDI+KI+KMIM + + P
Sbjct: 330  VFREDNFQK-AISVLTEKFEDLDTFSKKSGKKKKTGKSSQKGPSDIYKIIKMIMIKNYNP 388

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VIVFSFS+R+CE  A+ MSKLD N   E+D +  VF NA++ L+E DR LP I+ +LPLL
Sbjct: 389  VIVFSFSKRDCENLALQMSKLDMNDDSERDLISSVFNNAINSLSEVDRQLPQIQYILPLL 448

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DG  
Sbjct: 449  RRGIGIHHSGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTNVRKFDGKD 508

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQMSGRAGRRG DDRGI I+M+DE+ME    K+M+ G+   L S F L Y 
Sbjct: 509  FRWISSGEYIQMSGRAGRRGLDDRGIVILMIDEKMEPPIAKNMLKGEADRLESAFHLGYN 568

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             ILNLM R EG  + E +++ SF+QFQ    +P I  ++ KLE E  S+    E  VA Y
Sbjct: 569  MILNLM-RVEG-ISPEFMLERSFYQFQNNAEVPKIESELLKLERERDSIVIDDEFNVANY 626

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA--- 628
            ++L+  +     ++ + I  P+  L ++  GRL++V++  +D+GWG VVN  K+ S    
Sbjct: 627  YELRQQLEAYSNEMRNIINHPDHCLRFMQPGRLVRVKDKLSDFGWGAVVNYCKRVSPKGS 686

Query: 629  -------------------------------GVGTLPSRGGG---YIVPVQLPLISTLSK 654
                                             G  P +G      ++PV L  I  +  
Sbjct: 687  SQEYPPHESYIIDVLLWVAADSQVTKANQNFTQGIRPPKGDAGKMEVIPVLLSSIDGIGH 746

Query: 655  IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELE 714
            IR+ +P DL PLD R ++  +++E++ RFP G+  L+P+++M I+D  + +L+ +IE LE
Sbjct: 747  IRIFLPKDLNPLDQRLTVYKSIEEVKRRFPDGIALLDPIENMNIKDESLKNLLRKIEILE 806

Query: 715  HKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKL 773
            HK+  +P   SQ   ++   + RK  +  +I+  K ++ ++Q     +ELK R RVL++L
Sbjct: 807  HKILTNPFFNSQQLPELYEKYTRKMAIKSQIKATKKRISETQSIIQMNELKCRKRVLRRL 866

Query: 774  GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ 833
            G   ++ ++++KGR AC I TGDEL++TE++FNG FN+L   Q AAL SCF+  +KS E 
Sbjct: 867  GFTTSEDIIEMKGRVACEISTGDELILTEMIFNGVFNNLTSEQCAALLSCFVFQEKSEEA 926

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
            + L+ ELA PL+ +QE  R+IA++  E KL++  +EYV +  +P LMDV+Y W++G +F 
Sbjct: 927  LKLKEELASPLRAMQEIVRRIAKVSRESKLDIVEEEYV-NQFKPTLMDVVYTWAQGKSFF 985

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            ++ +MTD++EGSIIR+ RRL+E L Q+ +AA+ +G + LE K   A   ++R I  S  L
Sbjct: 986  QICKMTDVYEGSIIRAFRRLEELLRQMSSAAKVIGNLELEAKMNNAITLIKR-IHSSTLL 1044

Query: 954  Y 954
            Y
Sbjct: 1045 Y 1045


>gi|449445443|ref|XP_004140482.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Cucumis
           sativus]
          Length = 994

 Score =  910 bits (2353), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/967 (47%), Positives = 644/967 (66%), Gaps = 55/967 (5%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+V+ P G       +   +    +   E AK + F LDPFQ  ++ CLE  ESV+V
Sbjct: 35  ACLHDVSYPEGSFNPLPSSSLSSTGEEL---EPAKVFPFSLDPFQSEAIKCLETGESVMV 91

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT VA YAIAM+ R+KQRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT+ 
Sbjct: 92  SAHTSAGKTVVALYAIAMSLRNKQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTID 151

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           PNASCLVMTTEI R M Y+GSEV +EVAW+IFDE+HYM+DRERGVVWEESI+  P   + 
Sbjct: 152 PNASCLVMTTEIWRSMQYKGSEVTREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNARF 211

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA +FA+W+  +H QPCH+VYTD+RPTPLQHY+FP G  GLYLVVDEK  FR
Sbjct: 212 VFLSATVPNAKEFADWVAKVHHQPCHIVYTDYRPTPLQHYIFPSGSEGLYLVVDEKGHFR 271

Query: 277 EDNFVKLQDTFLKQKIGGRRE--NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
           ED+F K  +  +    G +++  NGK    +  G +G   SDIFK+VKMI++R++ PVI+
Sbjct: 272 EDSFQKALNALVPVSDGDKKKENNGKWQKSLTLGKTGE-DSDIFKMVKMIIQRQYDPVIL 330

Query: 335 FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           FSFS+RECE  AM M+KLD N  +EK  +E +F +A+D L+++D+ LP +  MLPLLKRG
Sbjct: 331 FSFSKRECEFLAMQMAKLDLNGDDEKVNIETIFWSAMDMLSDDDKKLPQVSNMLPLLKRG 390

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           I VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF+ V+K+DGD  R+
Sbjct: 391 IGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFRW 450

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
           + SGEYIQMSGRAGRRG D RGICI+MVDE++E +T K M+ G    L S F LSY  +L
Sbjct: 451 LSSGEYIQMSGRAGRRGIDKRGICILMVDEKLEPSTAKMMLKGNADCLNSAFHLSYNMLL 510

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
           N +   +G    E++++NSF+QFQ ++ +P++ K+V  LEEE  S+    E  +  Y+ L
Sbjct: 511 NQIRSEDG--NPENLLRNSFYQFQADRNIPNLEKQVKSLEEERDSIVIEEEDSLKNYYDL 568

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-----------WGWGVVVNVV 623
                 L+K + + +  P   L +L  GRL+ +     D             WG+++N  
Sbjct: 569 LNQYKSLKKDIRNIVLSPRYCLPFLQPGRLVSIECNRNDEISSTFSIKDQVTWGLIINFQ 628

Query: 624 K-----------KPSA----------------GVGT-------LPSRGGGYIVPVQLPLI 649
           +           KP +                G+G        L   G  ++V + +  I
Sbjct: 629 RVKGVSEEDASMKPESANYTVDVLTRCIVSKDGIGKKNVRIIQLKEHGEPHVVSIPISQI 688

Query: 650 STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
           +TL+ IR+ +P DL PL+AR++ L  + E+ SRFP+G+P L+P +DMKI+       V +
Sbjct: 689 NTLASIRILIPNDLLPLEARENTLKKISEVLSRFPKGVPLLDPEEDMKIQSSSYRKAVRR 748

Query: 710 IEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            E LE     H + KS   E +++    K E+  +I+ +K ++R S +  F+DELK R R
Sbjct: 749 TEALESLFDKHEVAKSTLVEEKLKALHLKQELTAKIRSIKKQLRSSSVLAFKDELKARKR 808

Query: 769 VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           VL++LG+  +D VV+LKG+ AC I + +EL ++ELMFNG F D    ++ AL SCF+  +
Sbjct: 809 VLRRLGYTTSDDVVELKGKVACEISSANELTLSELMFNGVFKDTKVEEIVALLSCFVWQE 868

Query: 829 KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
           K  +    R EL     QLQ++AR++A++Q ECK+E++V+ +V S+ RP +M+ +Y W+K
Sbjct: 869 KLQDAAKPREELELLFIQLQDTARRVAKVQLECKVEIDVEGFV-SSFRPDIMEAVYAWAK 927

Query: 889 GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           G+ F E++++T +FEGS+IR+ RRL+E L QL  A++++GE  LE KF  A   ++R I+
Sbjct: 928 GSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLILASKSIGETELETKFEEAVSKIKRDIV 987

Query: 949 FSNSLYL 955
           F+ SLYL
Sbjct: 988 FAASLYL 994


>gi|390596101|gb|EIN05504.1| antiviral helicase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1041

 Score =  910 bits (2352), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/993 (48%), Positives = 651/993 (65%), Gaps = 69/993 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG   EE ++ +  L     H+VAVP GY        +   +  V   + A+TY F LD
Sbjct: 62   LTGASVEEGSRLE--LRHQVRHQVAVPPGYP-------YVPISQHVPPAKPARTYKFTLD 112

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA     KQRVIYTSP+KALSNQKYRE
Sbjct: 113  PFQQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLERKQRVIYTSPIKALSNQKYRE 172

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 173  MLAEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 232

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP +++ VFLSAT+ NA QFAEWI   H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 233  RGVVWEETIILLPHSVRYVFLSATIPNAMQFAEWIAKSHEQPCHVVYTDFRPTPLQHYLF 292

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----GRRENGKASGRMAKGGSGSG 313
            P GG G+YLVV+EK +FREDNF K   T L +K G      +       G+  KGG   G
Sbjct: 293  PAGGEGIYLVVNEKGEFREDNFSKAMGT-LAEKQGEDPADPKSGGKGRKGKTKKGGDKKG 351

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
             SDI KI+KMIM + + PVI+F+FS+RECE  A+ +SK +FNTQ+E+D V  +F NA++ 
Sbjct: 352  PSDISKIIKMIMLKNYNPVIIFAFSKRECEALALQLSKQEFNTQDEQDLVTNIFNNAIEN 411

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L   DR+LP I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+KALFATETF++GLN
Sbjct: 412  LAPADRSLPQITNLLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKALFATETFSIGLN 471

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
            MPAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E    K+
Sbjct: 472  MPAKTVVFTATRKFDGREFRDLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPAAAKN 531

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            M+ G+   L S F L Y  +LNLM + EG  + E +++  F QFQ +  +P +  ++ K 
Sbjct: 532  MIKGEADRLDSAFHLGYNMVLNLM-KVEG-ISPEFMLERCFFQFQNQAGVPMLEDQLKKE 589

Query: 554  EEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD 613
            EE   ++    E  +AEY++ +  + Q+       +T P   L +L  GRL+KV+    D
Sbjct: 590  EEARDAIVVEDEKAIAEYYQCRQQLDQMSADFREVVTHPTYSLPFLQPGRLVKVKHKDLD 649

Query: 614  WGWGVVVNVVKK--------------------------------------------PSAG 629
            +GWG+++N  K+                                             S  
Sbjct: 650  FGWGIIINYQKRLPPKNRPMPKSEEIPPHEQYILDVLLNCATGSASSLPKDKSSVTTSTP 709

Query: 630  VGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ 685
             G  P + G      +VPV L  I  +S +R+ +P DLR   AR++   +V E++ RFP 
Sbjct: 710  GGIRPCKSGEKSEALVVPVLLSTIDAISHLRIYLPKDLRQPQARETTWKSVLEVQKRFPD 769

Query: 686  GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEI 744
            G+P L+PV++MKI+D + ++L+ +I+ LE K+F+ PL+K     Q+   + +K E    I
Sbjct: 770  GIPLLDPVENMKIDDAKFMELIKKIDTLEKKMFSSPLHKDPRLPQLYSAYAKKEEARERI 829

Query: 745  QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
            + LK +++ +      +ELK R RVL++LG  ++  +V +KGR AC I TGDELL+TEL+
Sbjct: 830  RALKKRIQATNDVLQLEELKCRKRVLRRLGFTNSADIVDMKGRVACEISTGDELLLTELI 889

Query: 805  FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
            FNG FN L   Q A L SCF+  +KS +   L+ ELA PL+ +QE AR+IA++  E KL 
Sbjct: 890  FNGVFNPLSPEQCAGLLSCFVFTEKSEQVTKLKEELAAPLRVMQEIARRIAKVSQESKLP 949

Query: 865  VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
            V  DEYV S+ +  LMD +  W +GA+F++++++TD FEGS+IR  RRL E L Q+  AA
Sbjct: 950  VVEDEYV-SSFKVELMDAVVQWCRGASFSDILKLTDQFEGSLIRVFRRLQELLRQMNQAA 1008

Query: 925  QAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            + +G   L++KF  ASE L R   ++F +SLYL
Sbjct: 1009 KVIGNTELQEKFDKASEMLERPNSVIFCSSLYL 1041


>gi|395331576|gb|EJF63957.1| antiviral helicase [Dichomitus squalens LYAD-421 SS1]
          Length = 1093

 Score =  907 bits (2344), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/1008 (48%), Positives = 653/1008 (64%), Gaps = 85/1008 (8%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E  S  + R+  R   H+VAVP GY        +   +  V   + A+ Y F LD
Sbjct: 100  LTGAVEAGSRLELRHQVR---HQVAVPPGYP-------YIPISQHVPPEKPAREYKFTLD 149

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA-------- 130
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA   + KQRVIYTSP+KA        
Sbjct: 150  PFQQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLQQKQRVIYTSPIKASNYSPVRD 209

Query: 131  -----------LSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
                       LSNQKYRE+  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+
Sbjct: 210  LNESSFCSIQALSNQKYREMLAEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEI 269

Query: 180  LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
            ++EVAWVIFDEIHYM+D+ERGVVWEE+II LP  ++ VFLSAT+ NA QFAEWIC  H+Q
Sbjct: 270  MREVAWVIFDEIHYMRDKERGVVWEETIILLPHTVRYVFLSATIPNAMQFAEWICKSHEQ 329

Query: 240  PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
            PCHVVYTDFRPTPLQHY+FP GG G+YLVV+EK +FREDNF K     L+++ G    + 
Sbjct: 330  PCHVVYTDFRPTPLQHYLFPAGGEGIYLVVNEKGEFREDNFTKAMG-MLQERSGEDPADP 388

Query: 300  KASGRMAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
            K+           G     SDI KIVKMIM + + PVIVF+FS+RECE  A++MSKL+FN
Sbjct: 389  KSGKGKKGKTKKGGEKKGPSDIQKIVKMIMLKNYNPVIVFAFSKRECEALALTMSKLEFN 448

Query: 356  TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
            T EE+D +  +F NA++ L+ +DR LP I  +LPLLKRGI +HH GLLP++KE++E+LFQ
Sbjct: 449  TTEEQDLITNIFNNAMENLSPDDRQLPQISNLLPLLKRGIGIHHGGLLPILKEVIEILFQ 508

Query: 416  EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
            EG +K LFATETF++GLNMPAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDR
Sbjct: 509  EGFIKVLFATETFSIGLNMPAKTVVFTAARKFDGHDFRNLSSGEYIQMSGRAGRRGLDDR 568

Query: 476  GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
            G+ I+M DE++E    K M+ G+   L S F L Y  +LNLM + EG  + E +++  F+
Sbjct: 569  GVVIMMCDEKLEPTAAKGMIKGEADRLDSAFHLGYNMVLNLM-KVEG-ISPEFMLERCFY 626

Query: 536  QFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERV 595
            QFQ++  +P I  ++ K EE+ A++    E  VA Y+ L+  + Q+       IT P   
Sbjct: 627  QFQHQAEVPVIEAELEKEEEKKAAMTIPDEELVASYYDLRQQLDQMASDFREVITHPNYS 686

Query: 596  LYYLGSGRLIKVREGGTDWGWGVVVNVVKK------------------------------ 625
            L YL  GRLIKV+    D+GWGV+VN  K+                              
Sbjct: 687  LPYLQPGRLIKVKYQKLDFGWGVIVNYQKRLPPKGRPGPKLEDIPAHEQYIIDVLLYCSK 746

Query: 626  ----PSAGVGTLPSRGG-----------GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQ 670
                P     T P+ GG             +VPV L  + ++S++RL +P DLRP++ R 
Sbjct: 747  GSTVPKDRNTTTPTPGGVQPCLSGKGGEPLVVPVLLSTVDSISRLRLFLPKDLRPVEQRN 806

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ 730
            +   +V E++SRFP G+P L+PV DMKI D +  +LV +I+ LE K+F+ PL+K     +
Sbjct: 807  NTWKSVLEVQSRFPDGIPLLDPVADMKITDEKFKELVQKIDTLERKMFSSPLHKDPRLPE 866

Query: 731  IRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAA 789
            +   + RK E    I++LK +++ +      +ELK R RVL++LG  +A  +V +KGR A
Sbjct: 867  LYTLYARKQEHQTRIRELKKRVQATHDVLQMEELKCRKRVLRRLGFTNASDIVDMKGRVA 926

Query: 790  CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            C I TGDELL+TEL+FNG FN L   Q A L SCF+  +KS +   L+ ELA PL+ +QE
Sbjct: 927  CEISTGDELLLTELIFNGVFNPLSPEQCAGLLSCFVFTEKSEQVTKLKEELAAPLRVMQE 986

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRS 909
             AR+IA++  E KL +N DEYV+S  +  LMD +  W +GA+F+++ ++TD FEGS+IR 
Sbjct: 987  IARRIAKVSKESKLPINEDEYVKS-FKVELMDAVVQWCRGASFSDICKLTDQFEGSLIRV 1045

Query: 910  ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
             RRL E + Q+  AA+ +G   L++KF  ASE L R   ++F +SLYL
Sbjct: 1046 FRRLQELIRQMAQAAKVIGNQELQEKFEKASEMLERPNSVIFCSSLYL 1093


>gi|407929005|gb|EKG21844.1| Helicase [Macrophomina phaseolina MS6]
          Length = 1023

 Score =  905 bits (2340), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/1020 (47%), Positives = 655/1020 (64%), Gaps = 82/1020 (8%)

Query: 2    EESLMAGKRKAPEEDLHVTGTPEEESTKK---------QRN-----LTRSCVHEVAVPSG 47
            +E L A + +  E D  VT + E E +++         Q++     L+    H+VA+P  
Sbjct: 20   QEQLAAKRLRRDEPDPVVTDSFETEQSREVAAAAGLQAQKDGTAVVLSHQVRHQVALPPD 79

Query: 48   YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
            Y        H     P      A+ Y F LDPFQ+VSV  ++RNESVLVSAHTSAGKT V
Sbjct: 80   YDYIPISE-HKPPEKP------AREYPFTLDPFQQVSVHSIQRNESVLVSAHTSAGKTVV 132

Query: 108  AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTE 167
            AEYAIA   ++ QRVIYTSP+KALSNQKYRE   +F DVGLMTGDVT++P A+CLVMTTE
Sbjct: 133  AEYAIAHCLKNNQRVIYTSPIKALSNQKYREFMADFGDVGLMTGDVTINPTATCLVMTTE 192

Query: 168  ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
            ILR MLYRGSE+++EVAWVIFDE+HYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA 
Sbjct: 193  ILRSMLYRGSEIMREVAWVIFDEVHYMRDKSRGVVWEETIILLPDKVRYVFLSATIPNAM 252

Query: 228  QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
            QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK  FRE+NF K   T 
Sbjct: 253  QFAEWITKTHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLIVDEKGVFREENFQKAMQT- 311

Query: 288  LKQKIGGRRENGKASGRMAKGGSG------SGGSDIFKIVKMIMERKFQPVIVFSFSRRE 341
            +  K G    +  A  +              G SDI+KIVKMIM + + PVIVFSFS+RE
Sbjct: 312  ISDKQGDDPADAMAKRKGKGKDKKLNKGGQKGPSDIYKIVKMIMMKNYNPVIVFSFSKRE 371

Query: 342  CEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
            CE  A+ MS L FN + EK  V +VF +A++ L+E+DR LP I+ +LPLLKRGI VHHSG
Sbjct: 372  CENLALQMSTLSFNDESEKQLVTKVFNSAIESLSEQDRELPQIQHLLPLLKRGIGVHHSG 431

Query: 402  LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
            LLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+DG S R++   E+I
Sbjct: 432  LLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGVSQRWVTPSEFI 491

Query: 462  QMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
            QMSGRAGRRG DDRGI I+M+DE+ME    K++V G+   L S F LSY  ILNLM R E
Sbjct: 492  QMSGRAGRRGLDDRGIVIMMIDEKMEPTVAKEIVRGEQDKLNSAFYLSYNMILNLM-RVE 550

Query: 522  GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQL 581
            G  + E +++  F QFQ   ++  + K +++LE E A +    E+ + EY+ L+  + Q 
Sbjct: 551  G-ISPEFMLERCFFQFQNTASVSGLEKHLNELEHEKAGIQIQDESTIREYYDLRQQLNQY 609

Query: 582  EKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV------------------- 622
             K +   IT P   L ++ SGRL++++    D+GWG VVN                    
Sbjct: 610  TKDMRDVITHPNYCLQFMQSGRLVRIKHKDYDFGWGAVVNFTHRKPGKNQKASDISPQQS 669

Query: 623  --------------------------VKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIR 656
                                      V+ PS G      +G   +VPV L  I ++  +R
Sbjct: 670  YVVDVLLQVANDVNFAPQPNQDLPQGVRPPSPG-----EKGKMEVVPVLLSCIDSIGHLR 724

Query: 657  LSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
            + +P DL+  + R S+  A++E++ RFP G+  L+P+++M I D     L+ +IE LE +
Sbjct: 725  IFLPSDLKSSEQRNSVRKALEEVKKRFPDGIAILDPIENMGITDESFKKLLRKIEVLESR 784

Query: 717  LFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGH 775
            L ++PL+ S    ++   +  K E+ ++I+++K ++ ++      DELK R RVL++LG 
Sbjct: 785  LLSNPLHNSPRLPELYDQYAGKVELGNKIKEVKKQISNALSIMQLDELKCRKRVLRRLGF 844

Query: 776  IDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN 835
            I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   Q A+  SCFI  +KS+E   
Sbjct: 845  INEADVVQLKARVACEISTGDELVLSELLFNGFFNELTPEQCASALSCFIFEEKSNETPT 904

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
            LR ELAKP + +Q  AR IA++  E KL +N DEYV+   +  LM+V++ WSKGATFA++
Sbjct: 905  LREELAKPFRDIQAQARIIAKVSQESKLAINEDEYVDG-FKYQLMEVVFAWSKGATFADI 963

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +MTD++EGS+IR  RRL+E L Q+   A+ +G  +LE+KF  A E++RR ++ + SLYL
Sbjct: 964  CKMTDVYEGSLIRLFRRLEELLRQIAQGAKVMGNSDLEQKFEKALEAIRRDLVAAQSLYL 1023


>gi|392575492|gb|EIW68625.1| hypothetical protein TREMEDRAFT_63092 [Tremella mesenterica DSM 1558]
          Length = 1091

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/969 (49%), Positives = 629/969 (64%), Gaps = 57/969 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L     H+VAVP  Y      A H     P      A+TY FELDPFQ V+ +C+ERNES
Sbjct: 133  LVHQVRHQVAVPPDYPYIPI-AQHKRLDPP------ARTYKFELDPFQFVATSCIERNES 185

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAE+AIA   ++ +RV+YTSP+KALSNQKYRE  + F DVGLMTGDV
Sbjct: 186  VLVSAHTSAGKTVVAEFAIATCLKEGRRVVYTSPIKALSNQKYREFLEIFTDVGLMTGDV 245

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ERGVVWEE+II LP  
Sbjct: 246  TINPTASCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETIILLPHT 305

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ N+ +FAEWIC  H+QPCHVVYTDFRPTPLQHY+FP G  G+YLVVDE+ 
Sbjct: 306  VRYVFLSATIPNSMEFAEWICQTHQQPCHVVYTDFRPTPLQHYLFPAGSEGIYLVVDERS 365

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMA----KGGSGSGGSDIFKIVKMIMERKF 329
             FREDNF K        +     +     GR      KGG+    SDI+KIV++IM R  
Sbjct: 366  NFREDNFQKAMAALAAGQGEDSADPNAGKGRKGQKTRKGGALKEKSDIYKIVRLIMTRSL 425

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             PVI+F+FS+RECE  A+ MSKL+FNT++E  TV QVF+NA+  L+E+DR LP IE +LP
Sbjct: 426  NPVIIFAFSKRECEALALQMSKLEFNTEDESTTVGQVFENAIGGLSEDDRKLPQIEALLP 485

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+DG
Sbjct: 486  LLKRGIGIHHGGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTSVRKFDG 545

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
               R +  GEYIQMSGRAGRRG D RGI I+M DE++E +  K MV G+   L S F L 
Sbjct: 546  KDFRNLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKLEPDIAKSMVKGQADRLDSAFHLG 605

Query: 510  YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
            Y  I+NLM R EG  + E++++  F+QFQ  K++P +  ++ K   E  S+    E  + 
Sbjct: 606  YNMIINLM-RVEG-VSPEYMLERCFYQFQNSKSVPVLEAQLKKAIAERDSIKIEQEESIK 663

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV--NVVKKPS 627
            +Y+ L+  ++       S IT P   L +L SGRLI+VR+G  D+GWGVVV  N V  P 
Sbjct: 664  DYYDLRSLLSDKGADFQSVITHPSYSLPFLQSGRLIEVRDGDKDFGWGVVVAYNKVTPPK 723

Query: 628  ------------------------AGVGTLP-SRGGGYIVP-------------VQLPLI 649
                                    A   T+P  R G  I+P             V L  +
Sbjct: 724  GRPPVITENDPPQKGYIVDVLIKIASDSTIPRDRSGASILPPPKNDPGVVAIISVLLSTV 783

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
             ++S+ R+++P  L+  + +     AV E+  R P G   L+P+K+M I+D    DLV Q
Sbjct: 784  QSISQFRINLPKMLKGQEEKNVAFKAVNEILRRMPDGPTLLDPIKNMGIQDKSFKDLVKQ 843

Query: 710  IEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            I  LE K+ +  +  S    Q+   + RK  V+ EI+ LK ++         +ELK R R
Sbjct: 844  ISLLEQKIQSLEITSSPLLPQLYDAYSRKQRVSEEIRTLKRRINGVHDVLQLEELKARKR 903

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++LG    D VV++KGR AC I TGDEL++TE+MF G FN L   Q A L SCF+  +
Sbjct: 904  VLRRLGFTTHDDVVEMKGRVACEISTGDELMLTEMMFGGVFNPLSPEQCAGLLSCFVFQE 963

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            KS  ++ L+ +LA PL+ LQE+AR+IA++ NE  + +  DEYV+   +  +MD +  W K
Sbjct: 964  KSEAKVRLKEDLAAPLRVLQETARRIAKVSNESGIALVEDEYVQG-FKVEMMDAVLQWCK 1022

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR--G 946
            GA FAE+ ++TDIFEGSIIR  RRL E L Q+  AA A+G   LE+KF A+ + L R   
Sbjct: 1023 GAKFAEICKLTDIFEGSIIRCFRRLQELLRQMGQAAHAIGNTELEEKFGASLQMLERPNT 1082

Query: 947  IMFSNSLYL 955
            ++F+ SLYL
Sbjct: 1083 VVFNPSLYL 1091


>gi|326509011|dbj|BAJ86898.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 995

 Score =  905 bits (2338), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/964 (48%), Positives = 644/964 (66%), Gaps = 53/964 (5%)

Query: 37  SCVHEVAVPSGYALTKDEAIHG--TFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
           +CVH+V+ P GY    D +  G    A        AKT+ F LDPFQ  ++ CL+  ESV
Sbjct: 40  ACVHDVSYPEGY----DASAPGPRIVAGGGEGAAPAKTFPFPLDPFQSEAIRCLDNGESV 95

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
           +VSAHTSAGKT VA YAIAM+ R++QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT
Sbjct: 96  MVSAHTSAGKTVVALYAIAMSLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVT 155

Query: 155 LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
           + PNASCLVMTTEI R M Y+GSEV++EVAWVIFDE+HYM+DRERGVVWEESI+  P   
Sbjct: 156 IEPNASCLVMTTEIWRSMQYKGSEVMREVAWVIFDEVHYMRDRERGVVWEESIVMAPKNS 215

Query: 215 KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
           + VFLSAT+ NA +FA+W+  +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVDE  +
Sbjct: 216 RFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPAGGDGLYLVVDENGK 275

Query: 275 FREDNFVKLQDTFLKQKIGG--RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           FRED+F K  +  L    G   +RENGK    +   G  +  SDIFK+VKMI++R++ PV
Sbjct: 276 FREDSFQKSLNV-LAPASGNDKKRENGKRQKGVVSAGKTNEESDIFKMVKMIIQRQYDPV 334

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           I+FSFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP +  MLPLLK
Sbjct: 335 ILFSFSKRECEFLAMQMAKMDLNGDDEKVNIETIFWSAMDLLSDDDKKLPQVSNMLPLLK 394

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  
Sbjct: 395 RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDRF 454

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R++ SGEYIQMSGRAGRRG D RG+CI+MVDE+ME +T K M+ G    L S F LSY  
Sbjct: 455 RWLSSGEYIQMSGRAGRRGIDQRGVCILMVDEKMEPSTAKMMLKGGADSLNSAFHLSYNM 514

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYH 572
           +LN +   +G    E ++++SF+QFQ ++ALPD+ K+V +LE E +S+    E  V +Y+
Sbjct: 515 LLNQLRSEDGD--PEKLLRHSFYQFQADRALPDLEKQVRELEVERSSMVIEDEESVKDYY 572

Query: 573 KLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD--------WGWGVVVNVVK 624
            L      L+K +   +  P+ VL +L SGRL++V+    +          WG+++N  K
Sbjct: 573 DLLQQYRTLKKDVRDIVLSPKYVLPFLQSGRLVRVQYTTDESTFSIDESVSWGIIINFEK 632

Query: 625 -------------------------------KPSAGVGTLPSRGGGYIVPVQLPLISTLS 653
                                          K +  V  L SRG   ++ + L  I  LS
Sbjct: 633 VKTNAEERKPEDCDYTVDVLTRCSVIKDVNGKKAMKVIPLKSRGEPVVISLPLSQIDGLS 692

Query: 654 KIRLSVPPDLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEE 712
            +R+ +P DL P++AR++ L  ++E+ SRF + G+P L+P +DM+++         +IE 
Sbjct: 693 SVRMYIPKDLLPVEARENTLRKIEEVLSRFAKDGVPLLDPEEDMEVKSSSYRKATRRIEA 752

Query: 713 LEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
           LE     H + N    + +++    K E+  +I+ +K  MR S    F+DELK R RVL+
Sbjct: 753 LESLFEKHDIRNAPHIQQKLKVLHAKQEIKAKIKSIKKTMRASTSLAFKDELKARKRVLR 812

Query: 772 KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS 831
           +LG+I  + VV++KG+ AC I + DEL +TELMF+GT  D    Q+ AL SCF+  +K  
Sbjct: 813 RLGYITNEDVVEIKGKVACEISSADELTLTELMFSGTLKDATVEQMVALLSCFVWQEKLQ 872

Query: 832 EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGAT 891
           +    R EL     QLQE+AR++A +Q ECK++++V+ +V S  RP +M+ +Y W++G+ 
Sbjct: 873 DAPKPREELDLLFYQLQETARRVANLQLECKIQIDVESFVNS-FRPDVMEAVYSWARGSK 931

Query: 892 FAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
           F ++++MT +FEGS+IR+ RRL+E L QL  A+Q++GE  LE K   A   ++R I+F+ 
Sbjct: 932 FHQIMEMTQVFEGSLIRAIRRLEEVLQQLILASQSIGETQLEAKLEEAVSKIKRDIVFAA 991

Query: 952 SLYL 955
           SLYL
Sbjct: 992 SLYL 995


>gi|225435997|ref|XP_002273102.1| PREDICTED: superkiller viralicidic activity 2-like 2 [Vitis
           vinifera]
          Length = 994

 Score =  903 bits (2334), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/999 (46%), Positives = 657/999 (65%), Gaps = 61/999 (6%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTR-----SCVHEVAVPSGYALTKDEAIHGTFANP 63
           KRK+ E+      +P+++  +   +L       +C+H+V+ P GY     E      ++P
Sbjct: 5   KRKSTEDPSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGY-----EPRSSFSSSP 59

Query: 64  VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVI 123
             + + AK + F LDPFQ  ++ CL+  ESV+VSAHTSAGKT VA YAIAM+ ++ QRVI
Sbjct: 60  RKDSKPAKEFPFTLDPFQSEAIKCLDAEESVMVSAHTSAGKTVVALYAIAMSLQNNQRVI 119

Query: 124 YTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEV 183
           YTSP+KALSNQKYRE  +EF DVGLMTGDVT+ PNASCLVMTTEI R M Y+GSE+++EV
Sbjct: 120 YTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREV 179

Query: 184 AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHV 243
           AWVIFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +H+QPCH+
Sbjct: 180 AWVIFDEVHYMRDRERGVVWEESIVMAPRNSRFVFLSATVPNAKEFADWVAKVHQQPCHI 239

Query: 244 VYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG-RRENGKAS 302
           VYTD+RPTPLQHY+FP GG GLYLVVDEK +FRED+F K  +  +    G  +RENGK  
Sbjct: 240 VYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKALNALVPAGEGDKKRENGKRQ 299

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             +  G +G   SDIFK+VKMI++R++ PVI+FSFS+R+CE  AM M+++D N   EK  
Sbjct: 300 KGLVVGRAGE-ESDIFKMVKMIIQRQYDPVILFSFSKRDCEFLAMQMARMDLNDDNEKVN 358

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +E +F +A+D L+++D+ LP +  MLPLLKRGI VHHSGLLP++KE++E+LFQEGL+K L
Sbjct: 359 IETIFWSAMDMLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCL 418

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETF++GLNMPAKTVVFT V+K+DGD  R+I SGE+IQMSGRAGRRG D+RGICI+MV
Sbjct: 419 FATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEFIQMSGRAGRRGIDERGICILMV 478

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE++E +T K M+ G    L S F LSY  +LN M   +G    E +++NSF+QFQ ++A
Sbjct: 479 DEKLEPSTAKMMLKGSADCLNSAFHLSYNMLLNQMRSEDGD--PEKLLRNSFYQFQADRA 536

Query: 543 LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
           +PD+ K+   LEEE  S+    E  +  Y+ L      L+K +   +  P   L +L  G
Sbjct: 537 IPDLEKQAKNLEEERDSIIIEEEDSLENYYNLIQQYKSLKKDVRDIVFSPRYCLPFLQPG 596

Query: 603 RLIKVREGGTDWG-----------WGVVVN----------VVKKP--------------- 626
           RL+ ++   T+             W V++N          V +KP               
Sbjct: 597 RLVCIQCTKTEENSPSFCIKDQTTWAVIINFERVKGTEDDVSRKPEDADYMVDVLTRCTV 656

Query: 627 --------SAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
                   +  + +L   G   +V V +  I  LS +RL +  DL PL+AR++ L  V E
Sbjct: 657 SRDGVLKKTIKIVSLKEPGEPVVVTVPISQIDGLSSVRLIISKDLLPLEARENTLKKVSE 716

Query: 679 LESRFP-QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQR 736
           + SRF  +G+P L+P +DMK++  +    V +IE LE     H + KS   E +++    
Sbjct: 717 VLSRFAKEGMPLLDPEEDMKVQSSQYRKAVRRIEALESLFDKHEVAKSPLIEQKLKVLHM 776

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
           K E+  +I+ +K  MR S    F+DELK R RVL+KLG++ +D VV+LKG+ AC I + D
Sbjct: 777 KKELTAKIKSIKRTMRSSTALAFKDELKARKRVLRKLGYVTSDNVVELKGKVACEISSAD 836

Query: 797 ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
           EL +TELMFNG F D+    + +L SCF+  +K  +    + EL     QLQ++AR++A+
Sbjct: 837 ELTLTELMFNGVFKDIKVEDMVSLLSCFVWREKLQDAQKPKDELELLFTQLQDTARRVAK 896

Query: 857 IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
           +Q E K++++V+ +V S  RP +M+ ++ W+KG+ F +++++T +FEGS+IR+ RRL+E 
Sbjct: 897 VQLESKVQIDVESFVNS-FRPDIMEAVHAWAKGSKFYQIMEITQVFEGSLIRAIRRLEEV 955

Query: 917 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L QL  AA+++GE  LE KF  A   ++R I+F+ SLYL
Sbjct: 956 LQQLIQAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 994


>gi|402219586|gb|EJT99659.1| antiviral helicase [Dacryopinax sp. DJM-731 SS1]
          Length = 1000

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/976 (48%), Positives = 642/976 (65%), Gaps = 64/976 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VAVP GY        +   +  V   + A+ Y F LDPFQ+VSV  +ERNES
Sbjct: 35   LSHQVRHQVAVPPGYP-------YIPISQHVSPSKPAREYKFVLDPFQKVSVHAIERNES 87

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   RDKQRVIYTSP+KALSNQKYR+  + F DVGLMTGDV
Sbjct: 88   VLVSAHTSAGKTVVAEYAIAQCLRDKQRVIYTSPIKALSNQKYRDFAEVFGDVGLMTGDV 147

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ERGVVWEE+II LP  
Sbjct: 148  TINPSATCLVMTTEILRSMLYRGSEIVREVAWVIFDEIHYMRDKERGVVWEETIILLPHK 207

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            +  VFLSAT+ NA +FA+WI  LH QPCHVVYTDFRPTPLQHY++P G +G++LVV+EK 
Sbjct: 208  VHFVFLSATIPNALEFAQWISKLHNQPCHVVYTDFRPTPLQHYLYPAGSNGIFLVVNEKS 267

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSG-------SGGSDIFKIVKMIME 326
            +F+EDNF +        K     +    SGR  K   G       S  SDI K+VKMI +
Sbjct: 268  EFKEDNFQRAMAAIADAKGDDPSDPNAGSGRKGKSKKGVDRGMCYSSQSDIHKLVKMISQ 327

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSF++RECE  AM++SKLDFNT +E + VE+V++ A++ L EEDR LP I+ 
Sbjct: 328  KGYGPVIVFSFNKRECEALAMAISKLDFNTDDEANMVEEVYKKAINALTEEDRKLPQIQH 387

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLLKRGI VHH GLLP++KE+VE+LFQE L+K LFATETF++GLNMPA+TVVFT V+K
Sbjct: 388  LLPLLKRGIGVHHGGLLPILKEVVEVLFQEALIKVLFATETFSIGLNMPARTVVFTTVRK 447

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG   R + SGEYIQMSGRAGRRG DDRGI ++MVDE++E    K+MV G+   L S F
Sbjct: 448  YDGREFRSLSSGEYIQMSGRAGRRGLDDRGIVVMMVDEKLEPAVAKNMVKGEADRLNSAF 507

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  +LNLM R EG  + E++++  F QFQ    +P +    S+ EEE A++    E 
Sbjct: 508  HLGYNMVLNLM-RVEG-ISPEYMLERCFFQFQNAATVPTLKTDFSRKEEEEAAIVVPEEE 565

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK-- 624
            EVA+   ++  + +L   +   IT P  ++ +L SGRL+++   G D+GWGV++N  K  
Sbjct: 566  EVAQIFDIRKQLEELRADMTEVITHPTYIVPFLQSGRLVQIVVDGVDFGWGVIINYTKRT 625

Query: 625  ----KPSAG---------------------------VGTLPSR-----------GGGYIV 642
                +P+                             +GT  SR           G   +V
Sbjct: 626  PPKNRPTPNIKEKPQLQYILDVLLNISTESGSSKDPIGTGSSRLDKRPVLSGEKGEPLVV 685

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
               L  ++ +S  R+ +P DLR   AR     +V E++ RFP G+ +L+PVK++ I+D  
Sbjct: 686  GCLLSTVNAISAFRIYLPKDLRSGPARDQAWRSVLEVQKRFPDGITRLDPVKNIGIKDES 745

Query: 703  VVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +IE LE +L  +PL+   +  +    + +K E + +++Q++ +++ +      +
Sbjct: 746  FLKLIKKIEMLEDRLLTNPLHSDPRLPDLYELYAQKKEKHEQVRQIRRRIQAANDVLQLE 805

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            ELK+R RVL++LG  +++ VV +KGR AC I  GDELL+TE+MFNG FN L   Q AA+ 
Sbjct: 806  ELKSRRRVLRRLGFTNSNDVVDVKGRVACEISAGDELLLTEMMFNGAFNPLSPEQCAAVL 865

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF+  +KS + + L  ELA PL+QLQE AR+IA++  E KL V  +EYV S  R  LMD
Sbjct: 866  SCFVFTEKSEKSLKLGEELAAPLRQLQELARRIAKVAQESKLPVVEEEYVMS-FRVELMD 924

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+  W +GA+F E+I++TD FEG++IR  R L E + Q+  A+QA+G   L++KF  A +
Sbjct: 925  VVIRWCRGASFGEIIKLTDQFEGNLIRVFRLLGELIRQMVEASQAIGNEELKEKFQKARD 984

Query: 942  SLRR--GIMFSNSLYL 955
             L R   ++F+ SLYL
Sbjct: 985  MLERPNSVIFTGSLYL 1000


>gi|410074153|ref|XP_003954659.1| hypothetical protein KAFR_0A00860 [Kazachstania africana CBS 2517]
 gi|372461241|emb|CCF55524.1| hypothetical protein KAFR_0A00860 [Kazachstania africana CBS 2517]
          Length = 1067

 Score =  901 bits (2329), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/972 (48%), Positives = 651/972 (66%), Gaps = 64/972 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        +   A      E A+TY F LDPFQ  +++C++R ES
Sbjct: 110  LSHQVRHQVALPPNYD-------YKPIAEHKRTNE-ARTYPFTLDPFQDTAISCIDRGES 161

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  EF DVGLMTGD+
Sbjct: 162  VLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDI 221

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+A CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ERGVVWEE+II LP  
Sbjct: 222  TINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETIILLPDK 281

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVDEK 
Sbjct: 282  VRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVDEKS 341

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSGSGGS--DIFKIVKMIMER 327
             FRE+NF K   +   Q   G   N   S    G+  KGG+  G +  DI+KIVKMI ++
Sbjct: 342  TFREENFQKAMASISNQV--GDDPNSIDSRGKKGQTYKGGAAKGDAKGDIYKIVKMIWKK 399

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
            K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD + ++F NA+  L E DR LP I+ +
Sbjct: 400  KYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDALTKIFNNAIALLPETDRELPQIKHI 459

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+KW
Sbjct: 460  LPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKW 519

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F 
Sbjct: 520  DGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFH 579

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E ++++SF QFQ   A+P + KK+ ++  EA S+    E  
Sbjct: 580  LGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVVAVPVMEKKLIEIGREAESIHIEDEQN 637

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-- 625
            + EY++++  +    + +   +  P  +L +L  GRL++VR  G ++GW  V++  K+  
Sbjct: 638  IKEYYEIQQTLKGYNEDVRHIMNHPANILSFLQPGRLVEVRIDGQNYGWAAVIDFAKRVN 697

Query: 626  ------------------------------------PSAGVGTLPSRGG----GYIVPVQ 645
                                                P+   G  P++ G      I+PV 
Sbjct: 698  KRNPTAVYTDHESYIVNVVVNTMYVDAPINLIKPFNPTFPEGVRPAQEGEKSVCAILPVT 757

Query: 646  LPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVD 705
            L  I+++  +RL +P D+R    ++++  ++QE+  RFP G+P L+PVK+MKIED +   
Sbjct: 758  LEAINSVGNLRLFMPKDIRAGGQKETVGKSLQEVRRRFPNGIPLLDPVKNMKIEDADFQK 817

Query: 706  LVNQIEELEHKLFAHPLNKSQ--DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
            L+ +I  LE+KL  +PL  S   DE  I+ + +K ++N E++QLK K+ +SQ     D+L
Sbjct: 818  LLRKINVLENKLTTNPLQGSVKFDEYYIQ-YGKKHKLNEEMKQLKHKISESQSVIQLDDL 876

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            + R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL SC
Sbjct: 877  RRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSC 936

Query: 824  FIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVI 883
            F   ++  E   L+ EL++PL+ ++E+A KIA+I  + K+EV   EYVES  R  LM+V+
Sbjct: 937  FAFQERCKETPRLKPELSEPLKAMRETAAKIAKIMKDSKIEVVEKEYVES-FRHELMEVV 995

Query: 884  YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
            Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G   L++K     + +
Sbjct: 996  YEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELIDVANTIGNAALKEKMENVVKLI 1055

Query: 944  RRGIMFSNSLYL 955
             R I+ + SLYL
Sbjct: 1056 HRDIVSAGSLYL 1067


>gi|393222424|gb|EJD07908.1| antiviral helicase [Fomitiporia mediterranea MF3/22]
          Length = 1000

 Score =  901 bits (2328), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/988 (48%), Positives = 645/988 (65%), Gaps = 64/988 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E  S  + R+  R   H+VAVP GY  T         AN V   +  + Y F LD
Sbjct: 26   LTGQVEAGSRLELRHQVR---HQVAVPPGYNYT-------PIANHVPPAKPVREYKFTLD 75

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA    +KQRVIYTSP+KALSNQKYRE
Sbjct: 76   PFQQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLENKQRVIYTSPIKALSNQKYRE 135

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 136  MLAEFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 195

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 196  RGVVWEETIILLPHTVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLF 255

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK---IGGRRENGKASGRMAKGGSGSGGS 315
            P GG G+YLVV+EK +FREDNF K   + + ++       +      G+  KGG   G S
Sbjct: 256  PQGGEGIYLVVNEKGEFREDNFSKAMGSLVDKQGDDPADPKAGKGRKGKTKKGGEKKGPS 315

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
            DI KI+KMIM + F PVIVF+FS+RECE  A++MSKL+FN+ EE+D +  +F NA+D L 
Sbjct: 316  DISKIIKMIMLKNFNPVIVFAFSKRECESLALTMSKLEFNSAEEQDLITNIFNNAIDNLA 375

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
             +DR LP I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMP
Sbjct: 376  PDDRQLPQISNILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMP 435

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
            AKTVVFT VKK+DG   R + SGEYIQMSGRAGRRG DDRG+ I+MVDE++E +  K+M+
Sbjct: 436  AKTVVFTDVKKFDGHEFRNLSSGEYIQMSGRAGRRGLDDRGVVIMMVDEKLEPSAAKNMI 495

Query: 496  LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
             G+   L S F L Y  +LNLM + EG  + E +++  F+QFQ    +P + K++  LEE
Sbjct: 496  KGEADRLDSAFHLGYNMVLNLM-KVEG-ISPEFMLERCFYQFQNSANIPILEKELKALEE 553

Query: 556  EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
            + AS+    E  VAEY++ +  + Q+       IT P   L +L  GRL+KVR    D+G
Sbjct: 554  KKASMKIPDEKLVAEYYEYRTQLDQMGADFREVITHPTYSLPFLQPGRLVKVRYQKLDFG 613

Query: 616  WGVVVNVVK------KPSAGVGTLPS---------------------------------- 635
            WGV++N  K      +P   V  +P                                   
Sbjct: 614  WGVIINYQKRLPPKNRPGPTVEEVPPHEQYIVDVLLNCSKGSSLPKDRNVTTATPNGVQP 673

Query: 636  -----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
                 +G   +VP+ L  I  +S IR+ +P DLRPL AR++   ++ E+  R   G+  L
Sbjct: 674  CPPGEKGEPLVVPILLSTIEGISLIRIFLPKDLRPLQARETAWKSILEVHRRMADGITLL 733

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKS 749
            +P+++M I+D +   LV +IE +E K+F+ PL+K     ++   +  K +    I++L  
Sbjct: 734  DPIQNMNIKDDKFKQLVKKIEIMEGKMFSSPLHKDPRLPELYTLYHEKRQCQTRIRELNK 793

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            +++ +      +ELK+R RVL++LG   +  +V +KGR AC I TGDELL+TEL+FNG F
Sbjct: 794  RVQATLDIMQLEELKSRKRVLRRLGFTSSSDIVDMKGRVACEISTGDELLLTELIFNGVF 853

Query: 810  NDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 869
            N L   Q AAL SCF+  +KS +   L  ELA PL+ +Q  AR+IA++  E K+ +  D+
Sbjct: 854  NPLLPEQCAALLSCFVFEEKSQQVTKLSEELAAPLRIMQGMARRIAKVMIESKMTIKEDD 913

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            YV+S  +  LMD +  W +GA+F+E+ ++TD FEG++IR  RRL E L Q+  AA+ +G 
Sbjct: 914  YVKS-FKVELMDAVIQWCRGASFSEICKLTDQFEGNVIRVFRRLQELLRQMSQAAKVIGN 972

Query: 930  VNLEKKFAAASESLRR--GIMFSNSLYL 955
              L +KF  A E L R   ++F +SLYL
Sbjct: 973  DELREKFDKALEMLARPNSVIFCSSLYL 1000


>gi|345561609|gb|EGX44697.1| hypothetical protein AOL_s00188g35 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1089

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/975 (48%), Positives = 651/975 (66%), Gaps = 65/975 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H +  NP      A+ YSF+LDPFQ VS+A +ER ES
Sbjct: 127  LSHQVRHQVALPPDYPYVPISE-HKSPENP------ARKYSFKLDPFQAVSIASIERGES 179

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE  QEF DVGLMTGDV
Sbjct: 180  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFSQEFGDVGLMTGDV 239

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 240  TINPSATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKVRGVVWEETIILLPDK 299

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWIC  H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 300  VRYVFLSATIPNAMQFAEWICKTHVQPCHVVYTDFRPTPLQHYLFPAGADGIHLVVDEKG 359

Query: 274  QFREDNFVKLQDTFLKQKIG-------GRREN-GKASGRMAKGGSGSGGSDIFKIVKMIM 325
             FREDNF K   + L  K+G       GRR   GK   +  KGG+  G +DI+KIVKMIM
Sbjct: 360  VFREDNFQKAMTSLL-DKMGDDPANPNGRRGGPGKKKWQTNKGGN-KGPNDIYKIVKMIM 417

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVFSFS+RECE HA+ MSKL FN ++EK+ V +VF+NA+  L++ED+ L  I+
Sbjct: 418  IKNYNPVIVFSFSKRECENHALQMSKLAFNDEDEKELVGRVFENAISSLSDEDKELSQIQ 477

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT+++
Sbjct: 478  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSLR 537

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG + R++   E+IQMSGRAGRRG DDRGI I M+DE++E NT +D+V G+   L S 
Sbjct: 538  KFDGIAQRWVSPSEFIQMSGRAGRRGLDDRGIVICMIDEKIEPNTARDIVKGEQDKLNSA 597

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E++++  F QFQ       + K++ +++ E  ++    E
Sbjct: 598  FYLGYNMILNLM-RVEG-ISPEYMLERCFFQFQNTANASGLEKELQEIDAERHAIQIEDE 655

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK 625
              + EY  L+  +    +++   +  P   L ++  GRL++V+  G D+GWG VVN  K+
Sbjct: 656  GTIREYFDLRQQLDTYGQQMRDVVNHPNYCLQFMQPGRLVRVKHKGVDFGWGAVVNYSKR 715

Query: 626  ---------------------------------PSAGV--GTLP----SRGGGYIVPVQL 646
                                              SAG+  G  P     RG   +VPV L
Sbjct: 716  IKGKNATEDFSAQESYIVDVLLNIAEGRTTNFSNSAGLPDGVYPPGEDERGVMEVVPVVL 775

Query: 647  PLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
              +  +  IR+ +P DL+  + R S+  +++E++ RFP G+  L+P+++M+I +     L
Sbjct: 776  SCLDGIGHIRIFLPKDLKAAEQRTSVQKSIEEVKRRFPDGIALLDPIENMQITEESFKKL 835

Query: 707  VNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            + +IE LE KL ++PL+ S    ++   +  K E+  +I+ L+  ++ +      DELK 
Sbjct: 836  MRKIEVLESKLLSNPLHSSPRLKELYTKYSHKVELTTKIKTLRKTIQSAHSVMQLDELKY 895

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R RVL++LG I  + ++QLK R AC I + DELL++ELMFN  FN+L   Q AA+ SC +
Sbjct: 896  RKRVLRRLGFISENDIIQLKARVACEISSADELLLSELMFNRMFNELTPEQCAAVLSCVV 955

Query: 826  PVDKS-----SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLM 880
              +KS     + +  ++ +LAKP + L E AR IA+I  E KL+VN +EY+++ +   LM
Sbjct: 956  FDEKSNNKDANNKPAMKDQLAKPYRALIEQARIIAKIAIESKLQVNEEEYIKA-ITSDLM 1014

Query: 881  DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
            +V++ W++GA+FA + +MTD++EGS+IR  RRL+E L Q+ AAA+ +G   LEKKF AA 
Sbjct: 1015 EVVFAWTQGASFATICKMTDVYEGSLIRMFRRLEELLLQMVAAAKVMGSEELEKKFEAAL 1074

Query: 941  ESLRRGIMFSNSLYL 955
              ++R I+ + SLYL
Sbjct: 1075 ALIKRDIVAAQSLYL 1089


>gi|336366009|gb|EGN94357.1| hypothetical protein SERLA73DRAFT_62726 [Serpula lacrymans var.
            lacrymans S7.3]
          Length = 1066

 Score =  900 bits (2327), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/988 (48%), Positives = 642/988 (64%), Gaps = 67/988 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E  S  + R+  R   H+VAVP  Y  T         +  V   + A+ Y F LD
Sbjct: 95   LTGGVEAGSRLELRHQVR---HQVAVPHNYPYT-------PISKHVPPSKPAREYKFTLD 144

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA   RDKQRVIYTSP+KALSNQKYRE
Sbjct: 145  PFQQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLRDKQRVIYTSPIKALSNQKYRE 204

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 205  MLAEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 264

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP +++ VFLSAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 265  RGVVWEETIILLPHSVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLF 324

Query: 259  PVGGSGLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGG 314
            P GG G+YLVV+EK +FREDNF K    LQ+   +     R   G+  G+  KGG   G 
Sbjct: 325  PAGGEGIYLVVNEKGEFREDNFSKAMGVLQERMGEDPADPRSGKGR-KGKSRKGGDKKGP 383

Query: 315  SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            SDI KI+K IM   + PVIVF+FS+RECE  A+++SK +FNT +E+D V  +F NA++ L
Sbjct: 384  SDISKIIKRIMLMNYNPVIVFAFSKRECEALALTLSKYEFNTSDEQDLVANIFDNAINNL 443

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
              +DR LP I  +LPLLKRG+ +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNM
Sbjct: 444  APDDRQLPQISNLLPLLKRGVGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNM 503

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
            PAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E  + K+M
Sbjct: 504  PAKTVVFTAARKFDGREFRDLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPTSAKEM 563

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            V G+   L S F L Y  ILNLM + EG  + E +++  F QFQ    +P +  ++   E
Sbjct: 564  VKGEADRLDSAFHLGYNMILNLM-KVEG-ISPEFMLERCFFQFQSSAGIPLLEDELKTEE 621

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
            +   ++    EA VA Y+  +  + Q+       IT P   L +L  GRL+KV+    D+
Sbjct: 622  KNKDAIAVPDEALVAVYYNYRQQLDQMATDFRDVITHPIYSLPFLQPGRLVKVKYQKIDF 681

Query: 615  GWGVVVNVVK------KPSAGVGTLP---------------------------------- 634
            GWGV++N  K      +P   +  LP                                  
Sbjct: 682  GWGVIINYQKRLPPKNRPMPQLEELPPHEQYVIDVLLNCAVGSALSKDNNVTATPGGIQP 741

Query: 635  ----SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
                 +G   +VPV L  I  +S IRL +P DLR   AR+++  +V E++ RFP G+  L
Sbjct: 742  CPHGQKGVPLVVPVLLSTIDGISHIRLFLPKDLRQDQARETMWKSVLEVQRRFPDGIALL 801

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKS 749
            +P+K+M I D +   LV +IE +E K+F+ PL+K  +  +    + +K E   +I+ LK 
Sbjct: 802  DPIKNMGINDDKFKALVKKIEVMEQKMFSSPLHKDPRLPDLYTLYSQKQEAQTKIRALKK 861

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            +++ +      +ELK R RVL++LG  +A  +V +KGR AC I TGDELL+TEL+FNG F
Sbjct: 862  RIQTTHDILQLEELKCRKRVLRRLGFTNASDIVDMKGRVACEISTGDELLLTELIFNGVF 921

Query: 810  NDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 869
            N L   Q A L SCF+  +K+  +  L  ELA PL+ +QE AR+IA++  E KL +  DE
Sbjct: 922  NTLSPEQSAGLLSCFVFTEKAFTK--LTEELASPLRVMQEIARRIAKVSQESKLPLVEDE 979

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            YV+S  +  LMD +  W +GA+F+++ ++TD FEG++IR  RRL E L Q+  AA+ +G 
Sbjct: 980  YVQS-FKVELMDAVVQWCRGASFSDICRLTDQFEGNLIRVFRRLGELLRQMTQAAKVIGN 1038

Query: 930  VNLEKKFAAASESLRR--GIMFSNSLYL 955
              L+ K   ASE L R   ++F +SLYL
Sbjct: 1039 SELQTKLKKASEMLERPNSVIFCSSLYL 1066


>gi|378729065|gb|EHY55524.1| hypothetical protein HMPREF1120_03657 [Exophiala dermatitidis
            NIH/UT8656]
          Length = 1075

 Score =  900 bits (2326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/967 (47%), Positives = 642/967 (66%), Gaps = 56/967 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H   A P      A+T+ F+LDPFQ+VS+A +ERNES
Sbjct: 120  LSHQVRHQVALPPDYDYVPISE-HKPPAEP------ARTWKFQLDPFQQVSIASIERNES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   +F DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFQADFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EV WVIFDEIHY++D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVGWVIFDEIHYLRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKTHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLIVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQK------IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
             FREDNF K   T   ++         RR+      ++ KGG+  G SDI+KIV+MIM +
Sbjct: 353  VFREDNFQKAMSTIAAKQGDDPANAMARRKGRGKDKKLNKGGN-KGPSDIYKIVRMIMTK 411

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+R+CE +A+ MS + FN + EK  V +VF +A++ L+ ED+NLP I+ +
Sbjct: 412  NYNPVIVFSFSKRDCEAYAIQMSTMSFNDESEKAMVSKVFDSALEMLSPEDKNLPQIQHL 471

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI +HHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 472  LPLLRRGIGIHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 531

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S R++   E+IQMSGRAGRRG D+RGI I+M+DEQME    K++V G+   L S F 
Sbjct: 532  DGISQRWVTPSEFIQMSGRAGRRGLDERGIVIMMIDEQMEPTVAKEIVRGEQDKLNSAFY 591

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNL+ R EG  + E +++  FHQFQ   ++  + +++ +LE E +++    E+ 
Sbjct: 592  LGYNMILNLL-RVEG-ISPEFMLERCFHQFQNTASVSGLERELQQLETEKSTMVIEDESA 649

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-- 625
            +  Y++L+  +    + + + I  P   L ++  GRL+++++G  D+GWG V+N  ++  
Sbjct: 650  IRAYYELRKQLDVYAEDMRNVIIHPNYSLPFMQPGRLVEIKDGENDFGWGAVINFARRGQ 709

Query: 626  ---------------------------PSAGVGTLPS---------RGGGYIVPVQLPLI 649
                                        +    TLP+         +    +VPV L  +
Sbjct: 710  GRSNEKLTPQEEWVLDIALEVAEGSTPATKTFQTLPAGIRPPQPGEKSKVEVVPVLLKCV 769

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
              +S +R+  P D+   + R+ I  ++ E++ RFP GL  L+P+++MKI D    +L+ +
Sbjct: 770  QKISHVRIFPPQDMTNPEERKKIQKSLAEVKRRFPDGLAVLDPIENMKITDNSFKELLRK 829

Query: 710  IEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            IE +E +L A+PL N  + E+    + +K  + ++I+ LK +++D+      DELK R R
Sbjct: 830  IEIMESRLVANPLHNSPRLESLYNKYAQKVALTNKIRSLKKQIQDAHAIMQLDELKCRKR 889

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++L  I+ D VVQLK R AC I TGDEL+++EL+FN  FNDL   Q AA+ SCF+  +
Sbjct: 890  VLRRLQFINEDEVVQLKARVACEISTGDELMLSELLFNRFFNDLTPEQCAAVMSCFVFEE 949

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            K +EQ  L  +LA+PL+++Q  AR IA +  E KL +N DEYV+S  +  LM VI+ W+ 
Sbjct: 950  KVNEQPTLPEDLARPLREIQRQARVIARVSAESKLAINEDEYVQS-FKWQLMPVIFAWAT 1008

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            G +F E+ +MTD++EGS+IR+ RRL+E L Q+  A++ +G   LEKKF  A   +RR I+
Sbjct: 1009 GKSFGEICKMTDVYEGSLIRTFRRLEEALRQMAEASKVMGSEELEKKFEEALSKVRRDIV 1068

Query: 949  FSNSLYL 955
             + SLYL
Sbjct: 1069 AAQSLYL 1075


>gi|412990612|emb|CCO17984.1| ATP-dependent RNA helicase DOB1 [Bathycoccus prasinos]
          Length = 1127

 Score =  900 bits (2326), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/1027 (47%), Positives = 646/1027 (62%), Gaps = 105/1027 (10%)

Query: 31   QRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGE-MAKTYSFELDPFQRVSVACLE 89
            QR    SCVHEVA+P    L+  E        P ++ E  AK Y+FELD FQ  +VA LE
Sbjct: 104  QRQKRTSCVHEVAIPKSLKLSAMEV--SLLKTPTFSSEKYAKKYAFELDAFQSTAVAVLE 161

Query: 90   RNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLM 149
            R ESV+V+AHTSAGKT VAEYAIAMAFRDKQRVIYTSPLKALSNQK+REL +EF DVGLM
Sbjct: 162  RGESVMVAAHTSAGKTVVAEYAIAMAFRDKQRVIYTSPLKALSNQKFRELEEEFGDVGLM 221

Query: 150  TGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIF 209
            TGD  ++PNA+CLVMTTE+LR MLYRG EV++EV W+IFDE+HYM+DRERGVVWEESI+F
Sbjct: 222  TGDTVINPNATCLVMTTEVLRSMLYRGGEVIREVRWIIFDEVHYMRDRERGVVWEESIVF 281

Query: 210  LPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVV 269
             P   ++VFLSAT+ NA +FAEW+  LH+   HVVYTD RPTPLQHY FP GG GL+L+V
Sbjct: 282  APKNARLVFLSATLPNALEFAEWVASLHEHCVHVVYTDHRPTPLQHYGFPKGGKGLHLIV 341

Query: 270  DEKEQFREDNFVKLQDTF----------------LKQKIGGRRENGKASGRMAKGGSGSG 313
            DE   FR +NF KL+                        GGR   G       + G+   
Sbjct: 342  DEVGNFRRENFEKLRAALKNSGGNSGNSGGGRGGRGPGRGGRGGRGGGGRGNGQHGNTQD 401

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
             SDI +I +MI  ++F PVIVFSFSRRECE++A    K+ FN +EE + VE+V+ NA+ C
Sbjct: 402  ESDILRITRMIKNKEFFPVIVFSFSRRECEEYAKQCKKIHFNDEEEAEAVEEVYTNALKC 461

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L+EEDR LPA++ +LPLLK GI +HHSGLLP +KELVE+LF E L+K LFATETFAMGLN
Sbjct: 462  LDEEDRKLPAVQGILPLLKAGIGIHHSGLLPCLKELVEILFSESLIKCLFATETFAMGLN 521

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
            MPA+TVVFTAVKK+DG+  R I  GEY QMSGRAGRRGKDDRGICI+M DE+ME + +++
Sbjct: 522  MPARTVVFTAVKKFDGNEERVIAPGEYTQMSGRAGRRGKDDRGICIVMADEKMEESAMRE 581

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            M+ GKP  L S F+LSYYSILNL+ RA G   AE VI+ SFH +Q+ KA+P +  +  ++
Sbjct: 582  MLQGKPQALNSEFKLSYYSILNLLKRASGTMDAEFVIQRSFHSYQHAKAVPGMKVERDRV 641

Query: 554  EEEAASLD---ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
             EE A +D    +   E  EY KL     +LEK+L      P R + +L  GRL+K+R G
Sbjct: 642  REEIAGIDEKLKNVSKESTEYGKLIERARRLEKELKRHELEPTRAMKFLTPGRLLKIRNG 701

Query: 611  GTDWGWGVVVNVVK-------------------------------KPSAGVGTLP----- 634
              D+GWG VVN  +                                P A  G L      
Sbjct: 702  YDDFGWGCVVNAYQLSDEMLRMRGIDPSTKDIAPETVVVDCLMRVGPGASEGILTPADVN 761

Query: 635  ---------------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
                            R    IVPV L L++ + ++ L +  DLR   +R ++  +V+ +
Sbjct: 762  IDAGGTILEGEKKKRKRNTTEIVPVSLALVANIGELILELSDDLRDSTSRDAVYESVRTI 821

Query: 680  ESRFPQ-----GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ---- 730
               F +      +P L+ V  +   +     +V ++E +  K+  H L ++ D+ +    
Sbjct: 822  VHTFKEKKGLRDVPSLDAVNALGCVEVSYASMVQELESVREKIKTHQLYEAGDDEEEMYY 881

Query: 731  -----IRC-----------------FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
                 +R                  F++KA +    + L S+++ S++ KFRDEL +RS+
Sbjct: 882  EKQKTLRAKMKDKNAPKEDFDEKAMFEKKATLEERSRVLSSRIKTSELSKFRDELSSRSK 941

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL+KL H+DA+GVV  KGR AC IDT DELL TELMFNG F      ++ AL S F+P +
Sbjct: 942  VLRKLNHVDAEGVVLPKGRCACEIDTADELLATELMFNGAFAKATPRELVALCSMFVPTE 1001

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            KS+++  +   L  P++ + ++A+ IA  Q E KLE++V++YV+S  R FL+++++ W+ 
Sbjct: 1002 KSNQKPTIPKNLEVPIKGVLDAAKLIANTQLEQKLEIDVEKYVDS-FRTFLVEIVHDWAG 1060

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            G TF+EV+  TD+FEG+I+R+ RRLDE + +L  AA A G+ NL +KF   +E LRRGI+
Sbjct: 1061 GKTFSEVLLRTDLFEGTIVRAMRRLDELMLELGRAAMACGDENLREKFEKGAELLRRGIV 1120

Query: 949  FSNSLYL 955
            F+ SLY+
Sbjct: 1121 FAPSLYV 1127


>gi|366988167|ref|XP_003673850.1| hypothetical protein NCAS_0A09110 [Naumovozyma castellii CBS 4309]
 gi|342299713|emb|CCC67469.1| hypothetical protein NCAS_0A09110 [Naumovozyma castellii CBS 4309]
          Length = 1064

 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/974 (48%), Positives = 653/974 (67%), Gaps = 68/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+ + +    A+TY F LDPFQ  +++C++R
Sbjct: 107  LSHQVRHQVALPPNYDYT-----------PIADHKRVNEARTYPFTLDPFQDTAISCIDR 155

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 156  GESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 215

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ERGVVWEE+II L
Sbjct: 216  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETIILL 275

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 276  PDKVRYVFLSATIPNAMEFAEWICKIHTQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 335

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSGSGGS--DIFKIVKMI 324
            EK  FRE+NF K   +   Q+  G   N   S    G+  KGG+  G +  DI+KIVKMI
Sbjct: 336  EKSTFREENFQKAMASISTQE--GDDPNSINSRGKKGQTFKGGAAKGDAKGDIYKIVKMI 393

Query: 325  MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
             ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+++EK+ + ++F NA+  L E DR LP I
Sbjct: 394  WKKKYNPVIVFSFSKRDCEELALKMSKLDFNSEDEKEALTKIFNNAIALLPETDRELPQI 453

Query: 385  ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
            + +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V
Sbjct: 454  KHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSV 513

Query: 445  KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVS 504
            +KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S
Sbjct: 514  RKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDS 573

Query: 505  TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG 564
             F L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + KK+ +L +E   +    
Sbjct: 574  AFHLGYNMILNLM-RVEG-ISPEFMLEHSFYQFQNVISVPIMEKKIVELNKEIEDIQVDD 631

Query: 565  EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK 624
            E  V +Y++++  +    + +   IT P  +L +L  GRLI+V  G   +GW  VV+ VK
Sbjct: 632  EENVKDYYEVRQTLDNYNEDVRHIITHPANILSFLQPGRLIEVSVGKQYYGWAAVVDFVK 691

Query: 625  K-----PSAGV---------------------------------GTLPSRGG----GYIV 642
            +     PSA                                   G  P+  G      I+
Sbjct: 692  RMNKRNPSAEFTDHESYIVNVVVNTMYVDSPLNLLKPFNPEFPEGIRPAEDGEQAVSAII 751

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I  +  +RL +P D++  + ++++  +++E+  RFP G+P ++P+K+MKIED +
Sbjct: 752  PITLDSIRAVGNLRLFMPKDVKAGNQKETVGKSLKEVGRRFPDGVPLIDPIKNMKIEDTD 811

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +IE LE KLFA+PL +S   +++   + +K  + H+ +QLK K+ +SQ     D
Sbjct: 812  FLKLMKKIEVLESKLFANPLAQSVRLSELYEKYSKKHALIHDTKQLKQKINESQAVIQLD 871

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG      +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 872  DLRRRKRVLRRLGFSTPSDIIELKGRVACEISSGDELLLTELIFNGNFNELTPEQSAALL 931

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ EL++PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 932  SCFAFQERCKEAPRLKPELSEPLKAMRELASKIAKIMKDSKIEVVEKDYVES-FRHELME 990

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W KGATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G   L++K     +
Sbjct: 991  VVYEWCKGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNAALKEKMETVLK 1050

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1051 LIHRDIVSAGSLYL 1064


>gi|255573838|ref|XP_002527838.1| helicase, putative [Ricinus communis]
 gi|223532762|gb|EEF34541.1| helicase, putative [Ricinus communis]
          Length = 991

 Score =  899 bits (2322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/968 (48%), Positives = 645/968 (66%), Gaps = 61/968 (6%)

Query: 37  SCVHEVAVPSGYALTK--DEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
           +C+H+V+ P  Y      D ++           + AK + F LDPFQ  ++ CL   ESV
Sbjct: 36  ACLHDVSYPENYVPPPRLDSSVQKDL-------KPAKEFPFTLDPFQSEAIKCLNNGESV 88

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
           +VSAHTSAGKT VA YAIAM+ R++QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT
Sbjct: 89  MVSAHTSAGKTVVALYAIAMSLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVT 148

Query: 155 LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
           + PNASCLVMTTEI R M Y+GSE+ +EVAWVIFDE+HYM+DRERGVVWEESI+  P   
Sbjct: 149 IEPNASCLVMTTEIWRSMQYKGSEITREVAWVIFDEVHYMRDRERGVVWEESIVMAPKNS 208

Query: 215 KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
           + VFLSAT+ NA +FA+W+  +H+QPCH+VYTD+RPTPLQHY+FP G  GLYLVVDEK +
Sbjct: 209 RFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIFPAGADGLYLVVDEKGK 268

Query: 275 FREDNFVKLQDTFLKQKIG-GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
           FRED+F K  +  + +  G  +RENGK    +  G  G   SDIFK+VKMI+ER++ PVI
Sbjct: 269 FREDSFQKAVNALVPKSEGEKKRENGKWQKGLVMGKLGE-ESDIFKMVKMIIERQYDPVI 327

Query: 334 VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
           +FSFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP +  MLPLLKR
Sbjct: 328 LFSFSKRECEFLAMQMAKMDLNEDDEKVNIETIFWSAMDMLSDDDKKLPQVSNMLPLLKR 387

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           GI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVF+ V+K+DGD  R
Sbjct: 388 GIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFSNVRKFDGDKFR 447

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
           ++ SGEYIQMSGRAGRRG D+RGICI+MVDE++E +T K M+ G    L S F LSY  +
Sbjct: 448 WLSSGEYIQMSGRAGRRGIDERGICILMVDEKLEPSTAKMMLKGSADSLNSAFHLSYNML 507

Query: 514 LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           LN M   +G    E++++NSF+QFQ ++A+PD+ K+V  LE+E  S+    E  +  Y+ 
Sbjct: 508 LNQMRCEDGD--PENLLRNSFYQFQADRAIPDLEKQVKVLEDERNSMIIEEEDSLKNYYD 565

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG-----------WGVVV-- 620
           L      L+K     +  P+  L +L  GR++ ++  G D             WGVV+  
Sbjct: 566 LIQQYKSLKKDARDIVFSPKYCLPFLQPGRIVCIQCSGVDENSPSFSVEDHVTWGVVISF 625

Query: 621 ---------NVVKKPSAGVGTLP-------SRGGGY-----IVP---------VQLPL-- 648
                    +  +KP     T+        SR G       IVP         V +P+  
Sbjct: 626 DRVKSFSEDDASRKPEDSNYTVDVLTRCVVSRDGVAEKSFKIVPLKEPGEPLVVSIPISE 685

Query: 649 ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
           I++LS  RL +  DL PL+ R++ L  V E  SR P GLP L+P  DMKI+       V 
Sbjct: 686 ITSLSSARLYMAKDLLPLEVRENTLKQVIEFLSRKPTGLP-LDPEADMKIKSSSYKKAVW 744

Query: 709 QIEELEHKLFAHPLNKSQDENQ-IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
           +IE LE+    H + KS   +Q ++   +K E+  +I+ +K  +R S    F+DELK R 
Sbjct: 745 RIEALENLFEKHEIAKSPLIDQKLKVLHKKQELTAKIKSVKKTLRSSTALAFKDELKARK 804

Query: 768 RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
           RVL++LG++ +D V++LKG+ AC I + DEL +TELMFNG   D+   ++ +L SCF+  
Sbjct: 805 RVLRRLGYVTSDDVLELKGKVACEISSADELTLTELMFNGVLKDIKVEEMVSLLSCFVWQ 864

Query: 828 DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
           +K  +    R EL     QLQ++AR++A++Q ECK++++V+++V S+ RP +M+ +Y W+
Sbjct: 865 EKLQDAGKPREELDMLFTQLQDTARRVAKLQLECKVQIDVEDFV-SSFRPDIMEAVYAWA 923

Query: 888 KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
           KG+ F E++++T +FEGS+IR+ RRL+E L QL  AA+++GE  LE KF  A   ++R I
Sbjct: 924 KGSKFYEIMEITQVFEGSLIRAIRRLEEVLQQLIQAAKSIGETELEAKFEEAVSKIKRDI 983

Query: 948 MFSNSLYL 955
           +F+ SLYL
Sbjct: 984 VFAASLYL 991


>gi|452984270|gb|EME84027.1| hypothetical protein MYCFIDRAFT_202861 [Pseudocercospora fijiensis
            CIRAD86]
          Length = 1085

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/938 (48%), Positives = 628/938 (66%), Gaps = 54/938 (5%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+ + F+LDPFQ VS+A +ERNESVLVSAHTSAGKT VAEYAIA   ++ QR+IYTSP
Sbjct: 152  EPARVWPFQLDPFQEVSIASIERNESVLVSAHTSAGKTVVAEYAIAQCLKNNQRIIYTSP 211

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYRE   EF DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 212  IKALSNQKYREFQAEFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVV 271

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI   H QPCHVVYTD
Sbjct: 272  FDEVHYMRDKSRGVVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKTHNQPCHVVYTD 331

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA- 306
            FRPTPLQHY FP G  G++LVVDEK  FRE+NF K     + +K G    +  A  +   
Sbjct: 332  FRPTPLQHYFFPAGAEGIHLVVDEKGVFREENFNKAMAA-IAEKAGDDGSDPMAKRKGRG 390

Query: 307  ------KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
                  KGG   G +DI+KIVKMIM + + PVIVFSFS+RECE +A+ MS+L FN   EK
Sbjct: 391  KDKKTNKGGKKEGPTDIYKIVKMIMMKNYNPVIVFSFSKRECETYALQMSQLAFNDDSEK 450

Query: 361  DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
              V++VF +A++ L+EED+ LP I  +LPLL+RGI +HHSGLLP++KE +E+LFQEGL+K
Sbjct: 451  QMVQKVFDSAIEMLSEEDKQLPQILHLLPLLRRGIGIHHSGLLPILKETIEILFQEGLIK 510

Query: 421  ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
             LFATETF++GLNMPAKTVVFT+V+K+DG + R++   E+IQMSGRAGRRG D+RGI I+
Sbjct: 511  VLFATETFSIGLNMPAKTVVFTSVRKFDGVTQRWVTPSEFIQMSGRAGRRGLDERGIVIM 570

Query: 481  MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            M+DE+M+    K++V G+   L S F L Y  +LNL+ R EG  + E +++  F QFQ  
Sbjct: 571  MIDEKMDPTVAKEIVRGEQDKLNSAFHLGYNMVLNLI-RVEG-ISPEFMLERCFFQFQNA 628

Query: 541  KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
             ++  + K++ +LE++ A +    EAE+ EY+ L+  +      +   I  P+ +  +L 
Sbjct: 629  ASVSGLEKQLMELEQKRADMIIEDEAEIKEYYDLRQSLTNYANDMKKVINHPQYLTRFLQ 688

Query: 601  SGRLIKVREGGTDWGWGVVVN------------------------VVKKPSAGV------ 630
            SGRL+K++    D+GWG VVN                        V+   +A V      
Sbjct: 689  SGRLVKIKYKDHDFGWGAVVNFTNVRPGRNQTAEDIPSSQRVVVDVIMNVAADVTPPDRS 748

Query: 631  --------GTLPSRGGGY----IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
                    G  P   G      +VPV    I ++  +R+ +P DLR  + R ++  A++E
Sbjct: 749  QLKDDLPPGVRPPAPGEKSKMEVVPVMNGTIDSVGHLRVFMPNDLRAQEQRNTVRKALEE 808

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRK 737
            +  RFP G+  L+P+++M I D     L+ +IE LEHKL +HPL+KS+   ++   +  K
Sbjct: 809  ISRRFPDGVAILDPIENMGINDDGFKKLLRKIEVLEHKLLSHPLHKSERLPELYDKYAAK 868

Query: 738  AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
             E+  EI+ L+ KM D+      DELKNR RVL++LG ++   VVQ+K R AC I TGDE
Sbjct: 869  VELGTEIKNLRKKMTDALSVLQLDELKNRKRVLRRLGFVNEADVVQIKARVACEISTGDE 928

Query: 798  LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
            L+++EL+FNG FNDL   Q AA+ SCFI  +KS +   L+ EL K  +++Q +AR++A++
Sbjct: 929  LVISELLFNGFFNDLTPEQCAAVLSCFIFEEKSDDAPQLKEELGKAFREVQAAARQVAKV 988

Query: 858  QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ECK+ VN +EY++S  +P LM+V+Y W  G TFA++  MTD++EGS+IR  RRL+E L
Sbjct: 989  SMECKVLVNEEEYLQS-FKPQLMEVVYAWCHGETFAKICTMTDVYEGSLIRLFRRLEELL 1047

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             Q   AA+ +G   L++KF  +   +RR I+ + SLYL
Sbjct: 1048 RQTAEAAKVMGSEELKEKFEQSLTKVRRDIVAAQSLYL 1085


>gi|168024035|ref|XP_001764542.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684120|gb|EDQ70524.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1002

 Score =  898 bits (2321), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/958 (50%), Positives = 634/958 (66%), Gaps = 50/958 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C+HEV+ P GY    D A  G    P    + AK Y F LDPFQR ++ CLE  ESVLV
Sbjct: 56   ACLHEVSYPEGY----DHANGGERLAP---AKPAKEYPFTLDPFQREAIRCLEAGESVLV 108

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIAMA RDKQRV+YTSP+KALSNQKYRE+ +EF DVGLMTGDVT+S
Sbjct: 109  SAHTSAGKTVVAEYAIAMALRDKQRVVYTSPIKALSNQKYREMLEEFTDVGLMTGDVTIS 168

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PNASCLVMTTEILR M YRGSEV +EVAW+IFDE+HYM+DRERGVVWEESI   P   + 
Sbjct: 169  PNASCLVMTTEILRSMQYRGSEVNREVAWIIFDEVHYMRDRERGVVWEESIAMAPKNARF 228

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FA+W+  +HKQPCH+VYTD+RPTPLQHY++P GG GLY+VVDEK  FR
Sbjct: 229  VFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYIYPAGGDGLYMVVDEKAVFR 288

Query: 277  EDNFVKLQDTFLKQKIG-GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            + +F K  +       G G ++N   + +  KGG  +  SD+FKIVKMIM+R+F PVIVF
Sbjct: 289  DSSFQKAVNALSSNAGGDGSKKNNGKTQKGGKGGVPAEPSDMFKIVKMIMQRQFDPVIVF 348

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+R CE++A  M+KLD N + EK  V+ VF NA+D L+++D+ LP +  +LPLLKRGI
Sbjct: 349  SFSKRNCEENANQMAKLDLNDENEKKLVDGVFWNAMDNLSDDDKKLPQVSHLLPLLKRGI 408

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  R+I
Sbjct: 409  GVHHSGLLPILKEVIEILFQEGLLKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWI 468

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGICI+M+DE++E    KDM+ G   PL S F LSY  +LN
Sbjct: 469  SSGEYIQMSGRAGRRGLDDRGICILMLDEKLEPAIAKDMIKGAADPLNSAFHLSYNMLLN 528

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
             M   E     E +++ SFHQFQ ++ALP + K+V  ++EE  ++    E +V +Y  L 
Sbjct: 529  QMRSEES--NPEELLRRSFHQFQCDRALPKLQKRVKDMDEERQNIVIEEEDQVKDYRNLL 586

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK----------- 624
              +  L   + S    P   L YL    L    +  T   WGV+VN  K           
Sbjct: 587  EQLYSLRADIRSIAFAPRYSLPYLQPDDLTVPVKKVTPV-WGVIVNFEKVQTAAKESFDG 645

Query: 625  ---KPS---------AGVGTLPSRGGGYIVP------------VQLPL--ISTLSKIRLS 658
                PS         A   T+   G   +V             V LPL  I  LS +R+ 
Sbjct: 646  ESQGPSETKFKVDILANCKTVEDEGRTKLVQPVSLNETGEPAVVSLPLNQIEHLSVVRIF 705

Query: 659  VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
            +P DLRP++AR+  L  V E+  RFP+G   L+P  DM++++      V + E +E  L 
Sbjct: 706  IPKDLRPVEARERCLRTVIEVLRRFPEGPQLLDPEDDMEVKNDSYKKAVRRAEAVEALLE 765

Query: 719  AHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
             H L  S   E ++R   +K  +  +I+  +  +R +    F+DELK R RVL++LG+  
Sbjct: 766  KHALADSPTLEPRLRALGQKEALTSKIRIARKDVRAATTLVFKDELKARRRVLRRLGYAT 825

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
            A+ VV+LKGR AC I + DEL++TELMF G FND    Q+ AL SC +  +K      L 
Sbjct: 826  AEEVVELKGRVACEISSADELVLTELMFGGVFNDSTVEQIVALLSCLVWQEKLKSMAKLP 885

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
             ELA    QL+E AR++ ++Q ECK+ V+V+EYV S  RP +M+++Y W KGA F +V++
Sbjct: 886  EELAGIYAQLREVARRVGKVQVECKMAVDVEEYVNS-FRPDIMELVYAWCKGAKFIDVMK 944

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  +FEGS+IR+ RRL+E L QL  AA+A+GE++LE KF  AS  ++R I+F+ SLYL
Sbjct: 945  LAQVFEGSLIRALRRLEEVLQQLLLAARAIGELDLEAKFEEASTRIKRDIVFAASLYL 1002


>gi|302307885|ref|NP_984680.2| AEL181Cp [Ashbya gossypii ATCC 10895]
 gi|299789216|gb|AAS52504.2| AEL181Cp [Ashbya gossypii ATCC 10895]
 gi|374107897|gb|AEY96804.1| FAEL181Cp [Ashbya gossypii FDAG1]
          Length = 1071

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/981 (47%), Positives = 652/981 (66%), Gaps = 64/981 (6%)

Query: 24   EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRV 83
            EE    K R+  R   H+VA+P  Y        +      +   E A+TY F LDPFQ  
Sbjct: 106  EENGKMKLRHQVR---HQVALPPNYD-------YKPIGQHIRTNE-ARTYPFTLDPFQDT 154

Query: 84   SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
            +V+C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  EF
Sbjct: 155  AVSCIDRGESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELLAEF 214

Query: 144  KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
             DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVW
Sbjct: 215  GDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVW 274

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EE+II LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYTDFRPTPLQHY+FP  G 
Sbjct: 275  EETIILLPDKVRYVFLSATIPNAMEFAEWICRIHSQPCHIVYTDFRPTPLQHYLFPAHGD 334

Query: 264  GLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIF 318
            G++LVVDEK  FRE+NF K   +   Q +G    +  + G+     KGG+  G +  DI+
Sbjct: 335  GIHLVVDEKGTFREENFQKAMASISNQ-LGDDSNSATSKGKRGQTYKGGAAKGDAKGDIY 393

Query: 319  KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEED 378
            KIVKMI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ EEKD + ++F NA+  L E D
Sbjct: 394  KIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDEEKDALTKIFNNAISLLPEAD 453

Query: 379  RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
            R LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKT
Sbjct: 454  RELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKT 513

Query: 439  VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGK 498
            VVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+
Sbjct: 514  VVFTSVRKWDGKQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQ 573

Query: 499  PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
               L S F L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + KK+++L ++  
Sbjct: 574  ADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFYQFQNITSMPVMEKKMNELSKKLE 631

Query: 559  SLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT-DWGWG 617
             +    E+ V +Y+ ++  +    + +   +T P  VL +L  GRLIK+  GG  D+GWG
Sbjct: 632  DIHVDDESNVKDYYDIRQTLDAYNEDVRKVMTHPANVLSFLQPGRLIKINVGGKQDYGWG 691

Query: 618  VVVNVVKK--------------------------------------PSAGVGTLPSRGG- 638
             VV+  K+                                      P    G  P+  G 
Sbjct: 692  AVVDFAKRINKRDPTAVYADHDSYIVNVVVNTMYKDSPLNLLKPFNPVLPEGIRPAADGE 751

Query: 639  ---GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKD 695
                 ++ + L  I  L  +R+ +P D++    ++ +   ++E++ RFP+G+P L+P+K+
Sbjct: 752  KTTCALISITLDSIQGLGNLRIFMPSDIKADSQKEVVGKTLKEVQRRFPKGIPLLDPIKN 811

Query: 696  MKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 754
            MK+ED E + L+ +IE LE K+ ++P+ N  + +     +  K  + ++I+ LKSKM ++
Sbjct: 812  MKLEDEEFLKLLKKIEILESKMNSNPIANSVKLQELYEKYSEKVAMQNDIKHLKSKMNEA 871

Query: 755  QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
            Q     D+L+ R RVL++LG   A  +++LKGR AC I +GDELL+TEL+ NG FN+L  
Sbjct: 872  QAVIQLDDLRRRKRVLRRLGFCSASDIIELKGRVACDISSGDELLLTELILNGNFNELKP 931

Query: 815  HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
             Q AAL SCF   ++  E   L+ ELA+PL+ ++E A KIA++  + KLE+   +YVES 
Sbjct: 932  EQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREVAAKIAKVIKDSKLEIVEKDYVES- 990

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
             R  LM+V+Y W +GA+F ++ +MTD++EGS+IR  +RL+E + +L   +  +G V L++
Sbjct: 991  FRHELMEVVYEWCRGASFTQICKMTDVYEGSLIRMFKRLEELIKELIDVSNTIGNVTLKE 1050

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            K  AA   + R I+ + SLYL
Sbjct: 1051 KMEAALHMIHRDIVSAGSLYL 1071


>gi|299688859|pdb|2XGJ|A Chain A, Structure Of Mtr4, A Dexh Helicase Involved In Nuclear Rna
            Processing And Surveillance
 gi|299688860|pdb|2XGJ|B Chain B, Structure Of Mtr4, A Dexh Helicase Involved In Nuclear Rna
            Processing And Surveillance
          Length = 1010

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/974 (47%), Positives = 653/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 52   LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 100

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 101  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 160

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 161  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 220

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 221  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 280

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 281  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 339

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 340  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 399

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 400  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 459

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 460  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 519

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+++L+++   ++   E
Sbjct: 520  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 577

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EYH+++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 578  ENVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 637

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 638  RINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVI 697

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 698  PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDED 757

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S    ++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 758  FLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISESQAVIQLD 817

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 818  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 877

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 878  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 936

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 937  VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 996

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 997  LIHRDIVSAGSLYL 1010


>gi|452842557|gb|EME44493.1| hypothetical protein DOTSEDRAFT_53576 [Dothistroma septosporum NZE10]
          Length = 1077

 Score =  897 bits (2319), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/945 (48%), Positives = 632/945 (66%), Gaps = 65/945 (6%)

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
             E A+T+ F+LDPFQ VS++ +ERNESVLVSAHTSAGKT VAEYAIA   ++ QRVIYTS
Sbjct: 142  AEPARTWPFQLDPFQEVSISSIERNESVLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTS 201

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYRE   EF DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV
Sbjct: 202  PIKALSNQKYREFQAEFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWV 261

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            +FDE+HYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI   H QPCHVVYT
Sbjct: 262  VFDEVHYMRDKSRGVVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKTHNQPCHVVYT 321

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
            DFRPTPLQHY FP G  G++LVVDEK  FRE+NF K   T         R     S  MA
Sbjct: 322  DFRPTPLQHYFFPAGADGIHLVVDEKGVFREENFNKAMATI------AERAGDDGSDPMA 375

Query: 307  KGGSGSGG------------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
            K                   +DI+KIVKMIM + + PVIVFSFS+R+CE +A+ MS+L F
Sbjct: 376  KRKGKGKDKKVNKGGKKDGPTDIYKIVKMIMMKNYNPVIVFSFSKRDCENYALQMSQLAF 435

Query: 355  NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
            N   EK  V +VF +A++ L++ED+ LP I+ +LPLL+RGI +HHSGLLP++KE +E+LF
Sbjct: 436  NDDSEKAMVSKVFNSAIEMLSDEDKELPQIQHLLPLLRRGIGIHHSGLLPILKETIEILF 495

Query: 415  QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
            QEGL+K LFATETF++GLNMPAKTVVFT+V+K+DG S R++   E+IQMSGRAGRRG D+
Sbjct: 496  QEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGISLRWVTPSEFIQMSGRAGRRGLDE 555

Query: 475  RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            RGI I+M+DE+ME    K++V G+   L S F L Y  ILNLM R EG  + E +++  F
Sbjct: 556  RGIVIMMIDEKMEPGVAKEIVRGEQDKLNSAFYLGYNMILNLM-RVEG-ISPEFMLERCF 613

Query: 535  HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPER 594
             QFQ   ++  + K++ +LE++ A +    E E+ EY+ L+ ++     ++ + IT P+ 
Sbjct: 614  FQFQNAASVSGLEKQLLELEQKRAEMIIDNEPEIKEYYDLRQNLTNYADEMKAVITHPQY 673

Query: 595  VLYYLGSGRLIKVREGGTDWGWGVVVNVVK-KPSAGVGT--LPS---------------- 635
            +  +L  GRL+KV+    D+GWG VVN +  +P  G     +PS                
Sbjct: 674  LTKFLQQGRLVKVKYKNHDFGWGAVVNFMSVRPGKGQKQEDIPSSAAVVVDVLMSVAADV 733

Query: 636  ------------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQS 671
                                    +G   +VPV    I ++  +R+ +P DLR  + R +
Sbjct: 734  TPPPPGSKLSDDLPPGVRPPGPGEKGKMEVVPVMNGTIDSVGHLRVFLPNDLRTQEQRNT 793

Query: 672  ILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI 731
            +  A++E+  RFP G+  L+P+++M I D     L+ +IE LEHKL + PL+K +   ++
Sbjct: 794  VRKALEEIARRFPDGIAILDPIENMGINDDGFKKLLRKIEVLEHKLLSSPLHKDERLAEL 853

Query: 732  -RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
               +  K E+++EI+ L+ KM D+      DELKNR RVL++LG ++   VVQLK R AC
Sbjct: 854  YDQYNAKVELSNEIKALRKKMSDALSVLQLDELKNRKRVLRRLGFVNDADVVQLKARVAC 913

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             I TGDEL+++EL+FN  FN+L   Q AA+ SCFI  +KS E+  L+ ELAKP +++Q  
Sbjct: 914  EISTGDELVLSELLFNRFFNELTPEQCAAVLSCFIFEEKSEEKGQLKEELAKPFREIQAQ 973

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            AR++A++  E K+ VN +EY++S  +P LM+V+Y W++GA+FA + +MTD++EGS+IR  
Sbjct: 974  ARQVAKVSMESKVVVNEEEYLQS-FKPELMEVVYAWTQGASFAAICKMTDVYEGSLIRLF 1032

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RRL+E L Q+  A++ +G   LE+KF AA   +RR I+ + SLYL
Sbjct: 1033 RRLEELLRQVAQASKVMGSAELEQKFEAALTKVRRDIVAAQSLYL 1077


>gi|224129500|ref|XP_002328732.1| predicted protein [Populus trichocarpa]
 gi|222839030|gb|EEE77381.1| predicted protein [Populus trichocarpa]
          Length = 1012

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/975 (47%), Positives = 639/975 (65%), Gaps = 65/975 (6%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C+H+V+ P  Y      ++         + + AK + F LDPFQ  +++CL+  +SV+V
Sbjct: 47   ACLHDVSYPENYVRPSSSSV----TQIQKDSKPAKEFPFTLDPFQSEAISCLDSGQSVMV 102

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VA YAIAM+ +++QRV+YTSP+KALSNQK+RE  +EF DVGLMTGDVT+ 
Sbjct: 103  SAHTSAGKTVVALYAIAMSLKNQQRVVYTSPIKALSNQKFREFKEEFSDVGLMTGDVTID 162

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PNASCLVMTTEI R M Y+GSE  +EVAW+IFDE+HYM+DRERGVVWEESI+  P   + 
Sbjct: 163  PNASCLVMTTEIWRSMQYKGSETTREVAWIIFDEVHYMRDRERGVVWEESILMAPKNARF 222

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FA+W+  +H+QPCH+VYTD+RPTPLQHY+FP GG GLYLVVDEK +FR
Sbjct: 223  VFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYIFPSGGEGLYLVVDEKAKFR 282

Query: 277  EDNFVKLQDTFLKQKIG-GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            ED+F K  +  + +  G  +RENGK    +     G   SDIFK+VKMI+ R++ PVI+F
Sbjct: 283  EDSFQKAVNALVPKAEGEKKRENGKWQKGLNVSRLGE-ESDIFKMVKMIIRRQYDPVILF 341

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP---------AIEL 386
            SFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP          +  
Sbjct: 342  SFSKRECEFLAMQMAKMDLNQDDEKANIETIFWSAMDMLSDDDKKLPQASCPPLLLCVSN 401

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            MLPLLKRGI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K
Sbjct: 402  MLPLLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRK 461

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DGD  R++ SGEYIQMSGRAGRRG DDRG+CI+MVDE++E +T K M+ G    L S F
Sbjct: 462  FDGDKFRWLSSGEYIQMSGRAGRRGIDDRGVCILMVDEKLEPSTAKMMLKGSADSLNSAF 521

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             LSY  +LN M   +G    E++++NSF QFQ ++ALPD+ K+   LEEE  S+    E 
Sbjct: 522  HLSYNMLLNQMRCEDGDL--ENLLRNSFFQFQADRALPDLEKQAKVLEEERNSMVIEEEE 579

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-----------WG 615
             +  Y+ L      L+K +   +  P+  L YL SGRL+ ++   +D             
Sbjct: 580  NLKNYYDLIQQYKSLKKDVRDIVFSPKHCLSYLQSGRLVCIQCTESDDKSPSFLIEDLVT 639

Query: 616  WGVVVN-----------VVKKPSAG---------------------VGTLPSRGGGYIVP 643
            WGV+VN            ++KP                        +  +P +  G  + 
Sbjct: 640  WGVIVNFDRVKGVSDDDAIRKPENANYTVDVLTRCVVTKDGVAKKKIKVVPLKEPGEPLI 699

Query: 644  VQLPL--ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
            V +P+  I+ LS  RL +  DL PL+ R++ L  V E  SR P GLP L+P  DM I+  
Sbjct: 700  VSIPIDQINILSSARLYMSKDLLPLEVRENTLKQVSEFLSRKPSGLP-LDPEGDMNIQSS 758

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
                 V +IE LEH    H + KS   + +++    K E+   I+ ++  MR S    F+
Sbjct: 759  SYKKAVRRIEALEHLFEKHEIAKSPLIKEKLKVLHTKQELTARIKLIRKSMRSSTSLAFK 818

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            DELK R RVL++LG+I +D VV+LKG+ AC I + DEL +TELMFNG   D+   ++ +L
Sbjct: 819  DELKARKRVLRRLGYITSDDVVELKGKVACEISSADELTLTELMFNGVLKDIKVEEMVSL 878

Query: 821  ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLM 880
             SCF+  +K  +    R EL     QLQ++AR++A++Q ECK++++V+ +V S+ RP +M
Sbjct: 879  LSCFVWQEKLQDAAKPREELDLLFTQLQDTARRVAKLQLECKVQIDVENFV-SSFRPDIM 937

Query: 881  DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
            + +Y W+KG+ F E++++T +FEGS+IR+ RRL+E L QL  AA+++GE  LE KF  A 
Sbjct: 938  EAVYAWAKGSKFYEIMEITKVFEGSLIRAIRRLEEVLQQLIEAAKSIGETELEAKFEEAV 997

Query: 941  ESLRRGIMFSNSLYL 955
              ++R I+F+ SLYL
Sbjct: 998  SKIKRDIVFAASLYL 1012


>gi|6322411|ref|NP_012485.1| Mtr4p [Saccharomyces cerevisiae S288c]
 gi|1352980|sp|P47047.1|MTR4_YEAST RecName: Full=ATP-dependent RNA helicase DOB1; AltName: Full=mRNA
            transport regulator MTR4
 gi|1008185|emb|CAA89341.1| MTR4 [Saccharomyces cerevisiae]
 gi|285812851|tpg|DAA08749.1| TPA: Mtr4p [Saccharomyces cerevisiae S288c]
 gi|392298385|gb|EIW09482.1| Mtr4p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1073

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/974 (47%), Positives = 653/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 115  LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 163

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 164  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 223

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 224  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 283

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 284  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 343

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 344  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 402

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 403  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 462

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 463  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 522

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 523  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 582

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+++L+++   ++   E
Sbjct: 583  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 640

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EYH+++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 641  ENVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 700

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 701  RINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVI 760

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 761  PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDED 820

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S    ++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 821  FLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISESQAVIQLD 880

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 881  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 940

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 941  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 999

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 1000 VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1059

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1060 LIHRDIVSAGSLYL 1073


>gi|297787672|pdb|3L9O|A Chain A, Crystal Structure Of Mtr4, A Co-Factor Of The Nuclear
            Exosome
          Length = 1108

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/974 (47%), Positives = 653/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 150  LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 198

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 199  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 258

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 259  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 318

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 319  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 378

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 379  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 437

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 438  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 497

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 498  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 557

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 558  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 617

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+++L+++   ++   E
Sbjct: 618  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 675

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EYH+++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 676  ENVKEYHEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 735

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 736  RINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTLPEGIRPAEEGEKSICAVI 795

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 796  PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDED 855

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S    ++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 856  FLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISESQAVIQLD 915

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 916  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 975

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 976  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 1034

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 1035 VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1094

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1095 LIHRDIVSAGSLYL 1108


>gi|256271011|gb|EEU06122.1| Mtr4p [Saccharomyces cerevisiae JAY291]
          Length = 1073

 Score =  897 bits (2318), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/974 (47%), Positives = 654/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 115  LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 163

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 164  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 223

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 224  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 283

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 284  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 343

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 344  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 402

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 403  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 462

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 463  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 522

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 523  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 582

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+++L+++   ++   E
Sbjct: 583  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 640

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 641  ENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 700

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 701  RINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPAFPEGIRPAEEGEKSICAVI 760

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 761  PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDGD 820

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S   +++   + +K ++N +++QLK K+ +SQ     D
Sbjct: 821  FLKLMKKIDVLNTKLSSNPLTNSMRLDELYGKYSKKHDLNEDMKQLKRKISESQAVIQLD 880

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 881  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 940

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 941  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 999

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 1000 VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1059

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1060 LIHRDIVSAGSLYL 1073


>gi|365764987|gb|EHN06505.1| Mtr4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1031

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/974 (47%), Positives = 654/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 73   LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 121

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 122  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 181

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 182  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 241

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 242  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 301

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 302  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 360

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 361  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 420

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 421  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 480

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 481  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 540

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+++L+++   ++   E
Sbjct: 541  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 598

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 599  ENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 658

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 659  RTNKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICAVI 718

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 719  PITLDSIKSIGNLRLYMPKDIRXSGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDED 778

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S   +++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 779  FLKLMKKIDVLNTKLSSNPLTNSMRLDELYGKYSRKHDLHEDMKQLKRKISESQAVXQLD 838

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 839  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 898

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 899  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 957

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 958  VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1017

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1018 LIHRDIVSAGSLYL 1031


>gi|299739082|ref|XP_001835034.2| MTR4 [Coprinopsis cinerea okayama7#130]
 gi|298403614|gb|EAU86800.2| MTR4 [Coprinopsis cinerea okayama7#130]
          Length = 1059

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 485/998 (48%), Positives = 643/998 (64%), Gaps = 82/998 (8%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E  S  + R+  R   H+VAVP GY  T         +  V   +  + Y FELD
Sbjct: 83   LTGAAETNSRLELRHQVR---HQVAVPPGYDYT-------PISKHVPPAKWDREYKFELD 132

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQRVSV  ++RNESVLVSAHTSAGKT VAEYAIA     KQRVIYTSP+KALSNQKYRE
Sbjct: 133  PFQRVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQCLNRKQRVIYTSPIKALSNQKYRE 192

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P+ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D E
Sbjct: 193  MLAEFGDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEIVREVAWVIFDEIHYMRDAE 252

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE++I LP +++ VFLSAT+ NA QFAEWIC  H QPCHVVYTDFRPTPLQHY+F
Sbjct: 253  RGVVWEETLILLPHSVRYVFLSATIPNAMQFAEWICKSHDQPCHVVYTDFRPTPLQHYLF 312

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN-----------GKASGRMAK 307
            P GG G+YLVV+EK +FR+DNF K         +G  +EN               G+  K
Sbjct: 313  PAGGEGIYLVVNEKGEFRDDNFAK--------AMGKIQENMADDPADPFAGKGRKGKSKK 364

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG   G SDI KI+KMIM + + PVIVFSFS+RECE  A+++SK +F  QEE+D +  +F
Sbjct: 365  GGEKKGPSDISKIIKMIMVKNYNPVIVFSFSKRECEGLALTLSKFEFTNQEEQDLIANIF 424

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            +NA+D L++EDR LP I  +LPLLKRGI  HH GLLP++KE++E+LFQEGL+K LFATET
Sbjct: 425  ENAIDNLSKEDRQLPQIVNLLPLLKRGIGFHHGGLLPILKEVIEILFQEGLIKVLFATET 484

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
            F++GLNMPAKTVVFTA +K+DG   R I  GEYIQMSGRAGRRG DDRG+ I+M DE++E
Sbjct: 485  FSIGLNMPAKTVVFTATRKFDGKDFRNISGGEYIQMSGRAGRRGLDDRGVVIMMCDEKLE 544

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
             +  K M+ G    L S F L Y  ILNLM + EG  + E +++  F QFQ   A+P + 
Sbjct: 545  PSAAKGMLKGVADRLDSAFHLGYNMILNLM-KVEG-ISPEFMLERCFFQFQSSAAIPQLE 602

Query: 548  KKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
             ++   +E    +    EA V++Y+ L+  + Q+       +T P   L ++  GRL+KV
Sbjct: 603  DELKAEQEAHRKIVVPDEALVSQYYDLRQQLDQMGADFREIVTHPAYSLPFMKPGRLVKV 662

Query: 608  REGGTDWGWGVVVNVVK------KPSAGVGTLP--------------------------- 634
            + G  D+GWG+VVN  K      +P   V +LP                           
Sbjct: 663  KHGKHDFGWGIVVNYQKRTPPRNRPGPSVDSLPPHEQYVIDVLLNLASTHSPSAKDRDAM 722

Query: 635  -------------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
                          +G   +VPV L  I ++S +R+ +P DLR   AR++   +V E++ 
Sbjct: 723  AATPDGIQPCPQGQKGAPQVVPVLLSTIDSISHLRIVLPKDLRQDQARETAWKSVLEVQR 782

Query: 682  RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEV 740
            RFP+G+  L+PV++M I+D +  +LV +I   E KLF+ PL+K     ++   F +K E 
Sbjct: 783  RFPKGIALLDPVENMNIKDEKFKELVKKIAATEQKLFSSPLHKDPRLPELYTLFSQKKES 842

Query: 741  NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
               I  LK +++ +Q     +ELK R RVL+KLG   A+ +V +KGR AC I +GDELL+
Sbjct: 843  LERISALKKRIQSTQDVLQMEELKCRKRVLRKLGFTTANDIVDVKGRVACEISSGDELLL 902

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            TEL+FNG FN L   Q AAL SCF+  +KS +Q  L  EL  PL+ +QE AR+IA++  E
Sbjct: 903  TELIFNGAFNTLKPEQCAALLSCFVFGEKSDQQTKLTEELTAPLRVMQELARRIAKVSKE 962

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD-IFEGSIIRSARRLDEFLNQ 919
              L ++ DEYV S+ +  LM+ +  W +GA+F+++ ++TD +FEGS+IR  RRL E L Q
Sbjct: 963  SLLTIDEDEYV-SSFKVELMEAVVQWCRGASFSDICKLTDQLFEGSLIRVFRRLGELLRQ 1021

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            +  AA  +G   L++KF  A E L R   ++F +SLYL
Sbjct: 1022 MAQAANVIGNEELKEKFETALEMLERPNSVIFCSSLYL 1059


>gi|403216027|emb|CCK70525.1| hypothetical protein KNAG_0E02660 [Kazachstania naganishii CBS 8797]
          Length = 1054

 Score =  897 bits (2317), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 481/991 (48%), Positives = 662/991 (66%), Gaps = 72/991 (7%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM-----AKTY 73
             T T  +E+  K R L+    H+VA+P  Y              P+  GE      A+TY
Sbjct: 82   TTLTAADEAEGKMR-LSHQVRHQVALPPNYDY-----------KPI--GEHKRVNEARTY 127

Query: 74   SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
             F LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSN
Sbjct: 128  PFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSN 187

Query: 134  QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
            QKYREL  +F DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HY
Sbjct: 188  QKYRELLADFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHY 247

Query: 194  MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
            M+D+ERGVVWEE+II LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPL
Sbjct: 248  MRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPL 307

Query: 254  QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGS 310
            QHY+FP  G G+YLVVDEK  FRE+NF K   +   Q+ G    +  A G+     KGG+
Sbjct: 308  QHYLFPSHGDGIYLVVDEKSTFREENFQKAMASISNQE-GDDPNSVNARGKKGQTFKGGA 366

Query: 311  GSGGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
              G S  DI+KIVKMI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD + ++F 
Sbjct: 367  AKGDSKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDALTKIFT 426

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            NA+  L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF
Sbjct: 427  NAIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETF 486

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
            ++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME 
Sbjct: 487  SIGLNMPAKTVVFTSVRKWDGKQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEP 546

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
               K MV G+   L S F L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + K
Sbjct: 547  QVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFYQFQNVVSVPVMEK 604

Query: 549  KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            K+ +L +EA S+    E  V  Y++L+  +    + +   +T P   L +L  GRL++V 
Sbjct: 605  KLLELGKEAESIHVEDEENVKSYYELRQTLDSYNEDVRHIMTHPANALSFLQPGRLVEVV 664

Query: 609  EGGT-DWGWGVVVNVVKK-----PSA------------GVGTL----------------- 633
              GT ++GWG VV+  K+     P+A             VGT+                 
Sbjct: 665  VNGTENYGWGAVVDFAKRINKRNPTAVYTDHESYIVNVVVGTMYIDSPVNLLKPFTTDFP 724

Query: 634  ----PSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ 685
                P++ G      I+PV L  I  +  +RL +P D++    + ++  +++E+E R P+
Sbjct: 725  EGIRPAKEGEKSMCVIIPVTLESIHAIGNLRLYMPKDVKASGQKDTVGKSLKEVERRHPK 784

Query: 686  GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEI 744
            G+P L+P+K+MKIED +   L+ +I+ LE KL+++PL+ S   +++   F RK  +  ++
Sbjct: 785  GIPLLDPIKNMKIEDEDFQKLLRKIKVLEAKLYSNPLSGSAKLSELYNQFSRKHAIETDM 844

Query: 745  QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
            +QLK K+ +SQ     D+L+ R RVL++LG    + V++LKGR AC I +GDELL+TEL+
Sbjct: 845  RQLKHKITESQSVIQLDDLRRRKRVLRRLGFCTPNDVIELKGRVACDISSGDELLLTELI 904

Query: 805  FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
            FNG FN+L   Q AAL SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+E
Sbjct: 905  FNGNFNELKPEQAAALLSCFSFQERCKEAPRLKPELAEPLKNMRELASKIAKIMKDSKME 964

Query: 865  VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
            V   +YVES  R  LM+V+Y W KGATF ++ +MTD++EGS+IR  +RL+E + +L   A
Sbjct: 965  VVEKDYVES-FRHELMEVVYEWCKGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVA 1023

Query: 925  QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +G   L +K     + + R I+ + SLYL
Sbjct: 1024 NTIGNTALREKMETVLKLIHRDIVSAGSLYL 1054


>gi|336378682|gb|EGO19839.1| ATP-dependent RNA helicase [Serpula lacrymans var. lacrymans S7.9]
          Length = 1083

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/1003 (48%), Positives = 645/1003 (64%), Gaps = 80/1003 (7%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E  S  + R+  R   H+VAVP  Y  T         +  V   + A+ Y F LD
Sbjct: 95   LTGGVEAGSRLELRHQVR---HQVAVPHNYPYT-------PISKHVPPSKPAREYKFTLD 144

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA   RDKQRVIYTSP+KALSNQKYRE
Sbjct: 145  PFQQVSVHAIQRNESVLVSAHTSAGKTVVAEYAIAQCLRDKQRVIYTSPIKALSNQKYRE 204

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 205  MLAEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 264

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP +++ VFLSAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 265  RGVVWEETIILLPHSVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLF 324

Query: 259  PVGGSGLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGG 314
            P GG G+YLVV+EK +FREDNF K    LQ+   +     R   G+  G+  KGG   G 
Sbjct: 325  PAGGEGIYLVVNEKGEFREDNFSKAMGVLQERMGEDPADPRSGKGR-KGKSRKGGDKKGA 383

Query: 315  --------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
                    SDI KI+K IM   + PVIVF+FS+RECE  A+++SK +FNT +E+D V  +
Sbjct: 384  LQILLTSPSDISKIIKRIMLMNYNPVIVFAFSKRECEALALTLSKYEFNTSDEQDLVANI 443

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
            F NA++ L  +DR LP I  +LPLLKRG+ +HH GLLP++KE++E+LFQEGL+K LFATE
Sbjct: 444  FDNAINNLAPDDRQLPQISNLLPLLKRGVGIHHGGLLPILKEVIEILFQEGLIKVLFATE 503

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
            TF++GLNMPAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++
Sbjct: 504  TFSIGLNMPAKTVVFTAARKFDGREFRDLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKL 563

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
            E  + K+MV G+   L S F L Y  ILNLM + EG  + E +++  F QFQ    +P +
Sbjct: 564  EPTSAKEMVKGEADRLDSAFHLGYNMILNLM-KVEG-ISPEFMLERCFFQFQSSAGIPLL 621

Query: 547  GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
              ++   E+   ++    EA VA Y+  +  + Q+       IT P   L +L  GRL+K
Sbjct: 622  EDELKTEEKNKDAIAVPDEALVAVYYNYRQQLDQMATDFRDVITHPIYSLPFLQPGRLVK 681

Query: 607  VREGGTDWGWGVVVNVVK------KPSAGVGTLP-------------------------- 634
            V+    D+GWGV++N  K      +P   +  LP                          
Sbjct: 682  VKYQKIDFGWGVIINYQKRLPPKNRPMPQLEELPPHEQYVIDVLLNCAVGSALSKDNNVT 741

Query: 635  ------------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
                         +G   +VPV L  I  +S IRL +P DLR   AR+++  +V E++ R
Sbjct: 742  ATPGGIQPCPHGQKGVPLVVPVLLSTIDGISHIRLFLPKDLRQDQARETMWKSVLEVQRR 801

Query: 683  FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVN 741
            FP G+  L+P+K+M I D +   LV +IE +E K+F+ PL+K  +  +    + +K E  
Sbjct: 802  FPDGIALLDPIKNMGINDDKFKALVKKIEVMEQKMFSSPLHKDPRLPDLYTLYSQKQEAQ 861

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
             +I+ LK +++ +      +ELK R RVL++LG  +A  +V +KGR AC I TGDELL+T
Sbjct: 862  TKIRALKKRIQTTHDILQLEELKCRKRVLRRLGFTNASDIVDMKGRVACEISTGDELLLT 921

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKS------SEQIN-LRMELAKPLQQLQESARKI 854
            EL+FNG FN L   Q A L SCF+  +K+      SEQ+  L  ELA PL+ +QE AR+I
Sbjct: 922  ELIFNGVFNTLSPEQSAGLLSCFVFTEKACLIISISEQVTKLTEELASPLRVMQEIARRI 981

Query: 855  AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLD 914
            A++  E KL +  DEYV+S  +  LMD +  W +GA+F+++ ++TD FEG++IR  RRL 
Sbjct: 982  AKVSQESKLPLVEDEYVQS-FKVELMDAVVQWCRGASFSDICRLTDQFEGNLIRVFRRLG 1040

Query: 915  EFLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            E L Q+  AA+ +G   L+ K   ASE L R   ++F +SLYL
Sbjct: 1041 ELLRQMTQAAKVIGNSELQTKLKKASEMLERPNSVIFCSSLYL 1083


>gi|190409449|gb|EDV12714.1| ATP-dependent RNA helicase DOB1 [Saccharomyces cerevisiae RM11-1a]
          Length = 1073

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/974 (47%), Positives = 653/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 115  LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 163

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 164  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 223

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 224  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 283

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 284  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 343

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 344  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 402

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 403  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 462

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 463  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 522

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 523  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 582

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK ++L+++   ++   E
Sbjct: 583  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKFAELKKDFDGIEVEDE 640

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 641  ENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 700

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 701  RINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICAVI 760

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 761  PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDED 820

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S   +++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 821  FLKLMKKIDVLNTKLSSNPLTNSMRLDELYGKYSRKHDLHEDMKQLKRKISESQAVIQLD 880

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 881  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 940

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 941  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 999

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 1000 VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1059

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1060 LIHRDIVSAGSLYL 1073


>gi|151945035|gb|EDN63286.1| DEAD box family ATP dependent helicase required for mRNA export from
            the nucleus [Saccharomyces cerevisiae YJM789]
          Length = 1073

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/974 (47%), Positives = 653/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 115  LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 163

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 164  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 223

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 224  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 283

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 284  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 343

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 344  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 402

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 403  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 462

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 463  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 522

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 523  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 582

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK ++L+++   ++   E
Sbjct: 583  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKFAELKKDFDGIEVEDE 640

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 641  ENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 700

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 701  RINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICAVI 760

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 761  PITLDSIKSIGNLRLYMPKDIRASGQKETVGNSLREVNRRFPDGIPVLDPVKNMKIEDED 820

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S   +++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 821  FLKLMKKIDVLNTKLSSNPLTNSMRLDELYGKYSRKHDLHEDMKQLKRKISESQAVIQLD 880

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 881  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 940

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 941  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 999

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 1000 VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1059

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1060 LIHRDIVSAGSLYL 1073


>gi|349579147|dbj|GAA24310.1| K7_Mtr4p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1073

 Score =  895 bits (2312), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/974 (47%), Positives = 653/974 (67%), Gaps = 67/974 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLER 90
            L+    H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R
Sbjct: 115  LSHQVRHQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDR 163

Query: 91   NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMT 150
             ESVLVSAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMT
Sbjct: 164  GESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMT 223

Query: 151  GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
            GD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II L
Sbjct: 224  GDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILL 283

Query: 211  PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
            P  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVD
Sbjct: 284  PDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVD 343

Query: 271  EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIM 325
            EK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKMI 
Sbjct: 344  EKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKMIW 402

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP I+
Sbjct: 403  KKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQIK 462

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 463  HILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVR 522

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S 
Sbjct: 523  KWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSA 582

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+++L+++   ++   E
Sbjct: 583  FHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKLAELKKDFDGIEVEDE 640

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVK 624
              V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+  K
Sbjct: 641  ENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDFAK 700

Query: 625  K--------------------------------------PSAGVGTLPSRGG----GYIV 642
            +                                      P+   G  P+  G      ++
Sbjct: 701  RINKRNPSALYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICAVI 760

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED +
Sbjct: 761  PITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIEDED 820

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             + L+ +I+ L  KL ++PL  S    ++   + RK +++ +++QLK K+ +SQ     D
Sbjct: 821  FLKLMKKIDVLNTKLSSNPLTNSMRLEELYGKYSRKHDLHEDMKQLKRKISESQAVIQLD 880

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL 
Sbjct: 881  DLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALL 940

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  LM+
Sbjct: 941  SCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHELME 999

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
            V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  +
Sbjct: 1000 VVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLK 1059

Query: 942  SLRRGIMFSNSLYL 955
             + R I+ + SLYL
Sbjct: 1060 LIHRDIVSAGSLYL 1073


>gi|254578738|ref|XP_002495355.1| ZYRO0B09306p [Zygosaccharomyces rouxii]
 gi|238938245|emb|CAR26422.1| ZYRO0B09306p [Zygosaccharomyces rouxii]
          Length = 1065

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/964 (48%), Positives = 646/964 (67%), Gaps = 59/964 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+VA+P  Y   K    H            A+TY F LDPFQ  +++C++R ESVLVSAH
Sbjct: 113  HQVALPPNYDY-KPIGDHKRMNE-------ARTYPFTLDPFQDTAISCIDRGESVLVSAH 164

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYREL  +F DVGLMTGD+T++P+A
Sbjct: 165  TSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYRELLADFGDVGLMTGDITINPDA 224

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
             CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ERGVVWEE+II LP  +  VFL
Sbjct: 225  GCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETIILLPDKVHYVFL 284

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ NA +FAEWIC +H QPCH+VYTDFRPTPLQHY+FP  G G+YLVVDEK  FRE+N
Sbjct: 285  SATIPNAMEFAEWICKIHVQPCHIVYTDFRPTPLQHYLFPAHGDGIYLVVDEKSTFREEN 344

Query: 280  FVKLQDTFLKQ--KIGGRRENGKASGRMAKGGSGSGGS--DIFKIVKMIMERKFQPVIVF 335
            F K   +   Q  +  G  ++    G+  KGG+  G S  DI+KIVKMI +R++ PVI+F
Sbjct: 345  FQKAMASISSQSGEDSGAVDSKGKKGQSFKGGASKGDSKGDIYKIVKMIWKRRYNPVIIF 404

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS+R+CE+ A+ MSKLDFN ++EK  + ++F NAV  L E DR LP I  +LPLLKRGI
Sbjct: 405  SFSKRDCEELALKMSKLDFNNEDEKVALTKIFNNAVALLPETDRELPQIVHLLPLLKRGI 464

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+KWDG   R++
Sbjct: 465  GIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWV 524

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
              GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y  ILN
Sbjct: 525  SGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILN 584

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            LM R EG  + E ++++SF+QFQ   ++P + KK+++L +E  S+    E  V +Y++++
Sbjct: 585  LM-RVEG-ISPEFMLESSFYQFQNVISVPIMEKKLAELVKEVDSIHVDDEENVKDYYEIR 642

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT-DWGWGVVVNVVKK--------- 625
              +      +   IT P  +L +L  GRL++V  GG   +GWG VV  VK+         
Sbjct: 643  QTLEGYNDDVRQVITHPANILSFLQPGRLVQVVIGGKYSYGWGAVVEFVKRVNRRNPTAV 702

Query: 626  -----------------------------PSAGVGTLPSRGG----GYIVPVQLPLISTL 652
                                         P+   G  P++ G      I+P+ L  I T+
Sbjct: 703  YSDHESYIVNVVVNTMYADSPMNLVKPFNPNFPEGIRPAQEGEKSICTIIPITLDSIRTV 762

Query: 653  SKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEE 712
              +RL +P D++    ++++  ++ E++ RF +G+P ++P+K+MKIED +   L+ +IE 
Sbjct: 763  GNLRLFMPKDVKASGQKETVGKSLMEIQRRFEKGIPLIDPMKNMKIEDDDFKKLLRKIEV 822

Query: 713  LEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
            LE KLF++P+ +S    ++   + +K+ +N++I  LK K+ +SQ     D+L+ R RVL+
Sbjct: 823  LESKLFSNPIAQSVRLKELYEKYSKKSALNNDINNLKHKITESQAVIQLDDLRRRKRVLR 882

Query: 772  KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS 831
            +LG    + V++LKGR AC I +GDELL+TE++FNG FNDL   Q AAL SCF   ++  
Sbjct: 883  RLGFCTQNDVIELKGRVACDITSGDELLLTEMIFNGNFNDLKPEQAAALLSCFSFQERCK 942

Query: 832  EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGAT 891
            E   L+ ELA+PL+ ++E+A KIA+I  + KLE+   +YVES  R  LM+V+Y W +GA 
Sbjct: 943  EAPRLKPELAEPLKAMREAAAKIAKIMKDSKLEIVEKDYVES-FRHELMEVVYEWCRGAN 1001

Query: 892  FAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
            F ++ +MTD++EGS+IR  +RL+E + +L   +  +G   L +K  A +  + R I+ + 
Sbjct: 1002 FTQICKMTDVYEGSLIRMFKRLEELVKELIDVSNTIGNSALREKMEAVANLIHRDIVSAG 1061

Query: 952  SLYL 955
            SLYL
Sbjct: 1062 SLYL 1065


>gi|367012988|ref|XP_003680994.1| hypothetical protein TDEL_0D01990 [Torulaspora delbrueckii]
 gi|359748654|emb|CCE91783.1| hypothetical protein TDEL_0D01990 [Torulaspora delbrueckii]
          Length = 1075

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/936 (49%), Positives = 633/936 (67%), Gaps = 55/936 (5%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+TY F LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+K
Sbjct: 145  ARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIK 204

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYREL  EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWV+FD
Sbjct: 205  ALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFD 264

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HYM+D+ERGVVWEE+II LP  +  VFLSAT+ NA +FAEWIC +H QPCH+VYTDFR
Sbjct: 265  EVHYMRDKERGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWICKIHVQPCHIVYTDFR 324

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRM 305
            PTPLQHY+FP  G G+YLVVDEK  FRE+NF K   +   Q   G   N   S    G+ 
Sbjct: 325  PTPLQHYLFPAHGEGIYLVVDEKSTFREENFQKAMASISNQ--SGDDPNSVDSRGKKGQS 382

Query: 306  AKGGSGSGGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
             KGG+  G +  DI+KIVKMI +RK+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD +
Sbjct: 383  FKGGAAKGDAKGDIYKIVKMIWKRKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDAL 442

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
             ++F NA+  L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LF
Sbjct: 443  TKIFNNAIALLPEVDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLF 502

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+D
Sbjct: 503  ATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMID 562

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            E+ME    K MV G+   L S F L Y  ILNLM R EG  + E +++NSF QFQ   ++
Sbjct: 563  EKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLENSFFQFQNIVSV 620

Query: 544  PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
            P + KK+ +L+ EA  ++   E  V E+++++  +    + +   IT P  +L +L  GR
Sbjct: 621  PAMEKKLIELQTEADKIEIEDEDNVKEFYEIRQTLDGYNEDVRHVITHPANILSFLQPGR 680

Query: 604  LIKVREGGTD-WGWGVVVNVVKK-----PSAGV--------------------------- 630
            +++V     D +GW VVV+  K+     PSA                             
Sbjct: 681  MVEVMVDNKDTYGWAVVVDFAKRMSKRDPSAEYTDHESYIVNVVVNTMYADSPLNLIKPF 740

Query: 631  ------GTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
                  G  P+  G      I+P+ L  I  +  +RL +P D++    ++ +  ++QE+ 
Sbjct: 741  NPRFPEGIRPALEGEKTVCAIIPITLESIRRVGNLRLFMPKDIKASGQKEVVGKSLQEVA 800

Query: 681  SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAE 739
             RFP G+P ++PV++MKIED +   L+ ++E LE KLF++PL +S    ++   F RK  
Sbjct: 801  RRFPDGIPLIDPVRNMKIEDDDFTKLLKKVEVLEKKLFSNPLAESVRLKELYENFSRKRA 860

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +  E +QLK K+ +SQ     D+L+ R RVL++LG      +++LKGR AC I +GDELL
Sbjct: 861  LIDETKQLKHKISESQAVIQLDDLRRRKRVLRRLGFCTQSDIIELKGRVACEISSGDELL 920

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+FNG FNDL   Q AAL SCF   ++  E   L+ ELA+PL+ ++E+A KIA+I  
Sbjct: 921  LTELIFNGNFNDLTPQQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREAAAKIAKIMK 980

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            + K+EV   +YVES  R  LM+V+Y W KGA+F ++ +MTD++EGS+IR  +RL+E + +
Sbjct: 981  DSKIEVVEKDYVES-FRHELMEVVYEWCKGASFTQICKMTDVYEGSLIRMFKRLEELVKE 1039

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L   A  +G   L++K  A    + R I+ + SLYL
Sbjct: 1040 LVDVANTIGNSALKEKMEAVLNLIHRDIVSAGSLYL 1075


>gi|156844001|ref|XP_001645065.1| hypothetical protein Kpol_1035p20 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156115721|gb|EDO17207.1| hypothetical protein Kpol_1035p20 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1077

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/991 (47%), Positives = 654/991 (65%), Gaps = 76/991 (7%)

Query: 20   TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM-----AKTYS 74
            T   EE+   K ++  R   H+VA+P  Y              P+  GE      A+TY 
Sbjct: 108  TAPVEEDGKVKLKHQVR---HQVALPPNYDY-----------QPI--GEHKRQNEARTYP 151

Query: 75   FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
            F LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQ
Sbjct: 152  FTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQ 211

Query: 135  KYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM 194
            KYREL  EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM
Sbjct: 212  KYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYM 271

Query: 195  KDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQ 254
            +D+ERGVVWEE+II LP  ++ VFLSAT+ N+ +FAEWIC +H QPCH+VYTDFRPTPLQ
Sbjct: 272  RDKERGVVWEETIILLPDKVRYVFLSATIPNSMEFAEWICKIHSQPCHIVYTDFRPTPLQ 331

Query: 255  HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGS 310
            HY+FP  G G+YLVVDEK  FRE+NF K   +       G   N   S    G+  KGGS
Sbjct: 332  HYLFPAHGDGIYLVVDEKSTFREENFQKAMASITNST--GDDPNSADSRGKNGKSFKGGS 389

Query: 311  GSGGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
              G +  DI+KIVKMI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD + ++F 
Sbjct: 390  SKGDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDALTKIFN 449

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            NA+  L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF
Sbjct: 450  NAIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETF 509

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
            ++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME 
Sbjct: 510  SIGLNMPAKTVVFTSVRKWDGKQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEP 569

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
               K MV G+   L S F L Y  ILNLM R EG  + E +++NSF+QFQ   ++P + K
Sbjct: 570  QVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLENSFYQFQNVISVPVMEK 627

Query: 549  KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            ++ +L+ E   +    E  + EY+ +K  +   ++ L   IT P  +L +L  GRL+KV 
Sbjct: 628  QLVELQNEVDEIYVEEEDSIKEYYDVKKTLETYKQDLRHIITHPANILSFLQPGRLVKVE 687

Query: 609  EG-GTDWGWGVVVNVVKK--------------------------------------PSAG 629
             G   D+GW  V++  K+                                      P+  
Sbjct: 688  VGEKQDYGWATVIDFAKRVNKRDPSAIYTDHESYLVNVVVNTMYVDAPINLIKQFNPALP 747

Query: 630  VGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ 685
             G  P+  G      I+PV L  ++++  +RL +P D++    ++++  ++QE++ RFP 
Sbjct: 748  EGIRPAAEGEKSICCILPVTLESVTSVGNLRLFMPKDIKASGQKETVGKSLQEVQRRFPN 807

Query: 686  GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEI 744
            G+P+++PVK+MKI+D +   L+ +I  LE KL ++PL  S    ++   + +K  +N +I
Sbjct: 808  GIPEIDPVKNMKIDDEDFHKLLRKINVLESKLNSNPLTDSIRLPELYEKYSKKHTINDDI 867

Query: 745  QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
            ++LK+K+ +SQ     D+L+ R RVL++LG      +++LKGR AC I +GDELL+TEL+
Sbjct: 868  KKLKTKINESQAVIQLDDLRKRKRVLRRLGFCTPSDIIELKGRVACEISSGDELLLTELI 927

Query: 805  FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
            FNG FN+L   Q AAL SCF   ++  E   L+ EL +PL+ ++E A KIA++  + K+E
Sbjct: 928  FNGNFNELTPEQAAALLSCFAFQERCKEAPRLKPELGEPLKAMREVAAKIAKVMKDSKIE 987

Query: 865  VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
            V   +YVES  R  LM+V+Y W KGATF ++ +MTD++EGS+IR  +RL+E + +L   +
Sbjct: 988  VVEKDYVES-FRHELMEVVYEWCKGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVS 1046

Query: 925  QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +G   L++K  A  + + R I+ + SLYL
Sbjct: 1047 NTIGNTALKEKMEAILKLIHRDIVSAGSLYL 1077


>gi|15218905|ref|NP_176185.1| RNA helicase [Arabidopsis thaliana]
 gi|5080810|gb|AAD39319.1|AC007258_8 Very similar to helicases [Arabidopsis thaliana]
 gi|51971869|dbj|BAD44599.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195495|gb|AEE33616.1| RNA helicase [Arabidopsis thaliana]
          Length = 988

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/979 (47%), Positives = 640/979 (65%), Gaps = 61/979 (6%)

Query: 24  EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRV 83
           E++ST+        CVH+V+ P  Y            A  V+N   AK + F LD FQ  
Sbjct: 24  EDDSTQIINEELVGCVHDVSFPENYV---------PLAPSVHNKPPAKDFPFTLDSFQSE 74

Query: 84  SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
           ++ CL+  ESV+VSAHTSAGKT VA YAIAM+ ++ QRVIYTSP+KALSNQKYR+  +EF
Sbjct: 75  AIKCLDNGESVMVSAHTSAGKTVVASYAIAMSLKENQRVIYTSPIKALSNQKYRDFKEEF 134

Query: 144 KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
            DVGLMTGDVT+ PNASCLVMTTEILR M Y+GSE+++EVAW+IFDE+HYM+D ERGVVW
Sbjct: 135 SDVGLMTGDVTIDPNASCLVMTTEILRSMQYKGSEIMREVAWIIFDEVHYMRDSERGVVW 194

Query: 204 EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
           EESI+  P   + VFLSAT+ NA +FA+W+  +H+QPCH+VYTD+RPTPLQHYVFP GG+
Sbjct: 195 EESIVMAPKNSRFVFLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYVFPAGGN 254

Query: 264 GLYLVVDEKEQFREDNFVKLQDTFL-KQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVK 322
           GLYLVVDEK +F ED+F K  +  +   +   +R+NGK    +  G  G   SDIFK+VK
Sbjct: 255 GLYLVVDEKSKFHEDSFQKSLNALVPTNESDKKRDNGKFQKGLVIGKLGE-ESDIFKLVK 313

Query: 323 MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
           MI++R++ PVI+FSFS++ECE  AM MSK+  N+ +EKD VE +F +A+D L+++D+ LP
Sbjct: 314 MIIQRQYDPVILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDKKLP 373

Query: 383 AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
            +  +LP+LKRGI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT
Sbjct: 374 QVSNILPILKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFT 433

Query: 443 AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPL 502
            V+K+DGD  R++ SGEYIQMSGRAGRRG D RGICI+MVDE+ME    K M+ G    L
Sbjct: 434 NVRKFDGDKFRWLSSGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSADSL 493

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
            S F LSY  +LN +   EG    E++++NSF QFQ ++A+PD+ K++  LEEE  SL  
Sbjct: 494 NSAFHLSYNMLLNQLRCEEGD--PENLLRNSFFQFQADRAIPDLEKQIKSLEEERDSLVI 551

Query: 563 SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW-------- 614
             E  +  Y+ L L    L+K +   +  P+  L +L   R + +     D         
Sbjct: 552 EEEESLKNYYNLILQYKSLKKDIREIVFTPKYCLPFLLPNRAVCLDCTNDDEEPQSFSIE 611

Query: 615 ---GWGVVV--NVVK---------KPSAGVGT-----------------------LPSRG 637
               WGV++  N VK         +P     T                       +  RG
Sbjct: 612 DQDTWGVIMKFNKVKSLSEDDDSRRPEDANYTVDVLTRCMVSKDGVGKKKVKAVPIKERG 671

Query: 638 GGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
              +V V L  I +LS   +++P DL PL+AR++ L  V EL SR P G+P L+P  DMK
Sbjct: 672 EPVVVTVPLSQIKSLSSAIMNIPKDLVPLEARENALKKVSELLSRHPDGIP-LDPEVDMK 730

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQI 756
           I+       V ++E LE+    H + KS     +++  Q K E+  +I+ LK  +R S  
Sbjct: 731 IKSSSYKKTVRRLEALENLFEKHKIAKSPLITEKLKVLQMKEELIAKIKSLKKTVRSSTA 790

Query: 757 QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ 816
             F+DELK R RVL++LG+I +D VV+LKG+ AC I + +EL +TELMF+G F D    +
Sbjct: 791 LAFKDELKARKRVLRRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKVEE 850

Query: 817 VAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
           + +L SCF+  ++  +    R EL     QLQ++AR++AE+Q +CK+E++V+ +V+S  R
Sbjct: 851 LVSLLSCFVWRERLPDAAKPREELDLLFIQLQDTARRVAEVQLDCKVEIDVESFVQS-FR 909

Query: 877 PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
           P +M+ +Y W+KG+ F EV+++  +FEGS+IR+ RR++E L QL  AA+++GE  LE K 
Sbjct: 910 PDIMEAVYAWAKGSKFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKL 969

Query: 937 AAASESLRRGIMFSNSLYL 955
             A   ++R I+F+ SLYL
Sbjct: 970 EEAVSKIKRDIVFAASLYL 988


>gi|393230036|gb|EJD37648.1| antiviral helicase [Auricularia delicata TFB-10046 SS5]
          Length = 1037

 Score =  894 bits (2310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 478/990 (48%), Positives = 639/990 (64%), Gaps = 68/990 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E +   + R+  R   H+VAVP GY        H    NP      A+ Y F LD
Sbjct: 63   LTGAVEADQRLELRHQVR---HQVAVPPGYDYVPISQ-HVPSPNP------ARVYPFTLD 112

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+V++  +ER ESVLVSAHTSAGKT VAEYAIA   R+KQRVIYTSP+KALSNQKYRE
Sbjct: 113  PFQQVAIHAIERTESVLVSAHTSAGKTVVAEYAIAQCLRNKQRVIYTSPIKALSNQKYRE 172

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
               EF DVGLMTGD+T+ P++SCLVMTTEILR MLYR S+V+ EV W+IFDEIH+M+D +
Sbjct: 173  FKAEFGDVGLMTGDITIEPSSSCLVMTTEILRSMLYRRSDVIAEVGWIIFDEIHWMRDAD 232

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP ++  VFLSAT+ NA +FAEW+C  H QPCHVVYTDFRPTPLQHY+F
Sbjct: 233  RGVVWEETIILLPHSVHHVFLSATIPNAMEFAEWVCKTHGQPCHVVYTDFRPTPLQHYLF 292

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR------MAKGGSGS 312
            P GG G+YLVV+EK +FREDNF K     +++  GG       SGR         G +  
Sbjct: 293  PQGGEGIYLVVNEKGEFREDNFQKAMGMLVEK--GGEDPASATSGRNKKGKTKKGGDAKK 350

Query: 313  GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
             GSDI KIVKMI+ + + PVI+F+FS+R+CE  A++MSK++ NT EE+D V+ +F NA++
Sbjct: 351  SGSDISKIVKMILLKNYHPVIIFAFSKRDCEGLALNMSKVEINTAEEQDMVQTIFTNAIE 410

Query: 373  CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
             L+E DR LP I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GL
Sbjct: 411  NLSEADRALPQISQILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGL 470

Query: 433  NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLK 492
            NMPAKTVVFT+V+K+DG   R +  GEYIQMSGRAGRRG DDRG+ I+M DEQ+E    K
Sbjct: 471  NMPAKTVVFTSVRKFDGRDFRDLSGGEYIQMSGRAGRRGLDDRGVVIMMCDEQLEPAAAK 530

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
             MV G+   L S F LSY  ILNLM R EG  + E +++  F QFQ    +P + K++ +
Sbjct: 531  AMVKGEADRLNSAFHLSYNMILNLM-RVEG-VSPEFMLERCFFQFQTTAEVPKLEKELRE 588

Query: 553  LEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
             +E    L    E  + +Y+ L+  +  L       IT P   L +L  GRL+KV+    
Sbjct: 589  AQEAEKKLVVEDEELIKDYYDLRQQLDLLNADFRDVITHPTYCLPFLQVGRLVKVKHDDV 648

Query: 613  DWGWGVVVNVVKK-PSAG---------------------------------------VGT 632
            D+GWGVV+N  K+ P  G                                       VG 
Sbjct: 649  DFGWGVVINYQKRLPPKGKAVTESGPPQSQYVVDVLLNCASGTAIGKDARSGANATPVGV 708

Query: 633  LP----SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
             P     +G   +VPV L  + ++S +R+ +P DLRP +AR +   AV+E++ RFP GL 
Sbjct: 709  RPCAPDGKGEPVVVPVLLSTLESISHLRIHLPKDLRPREARDTAWRAVREVQRRFPGGLG 768

Query: 689  KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQL 747
             L+PV++M I+D +   L+ +I  LE +L A+ L N ++       ++RK +    ++ +
Sbjct: 769  LLDPVENMGIKDDKFRTLLAKIASLEGRLVANKLHNDARLPRLYEAYKRKVDAGERVKAI 828

Query: 748  KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
            + +++ +      +ELK R RVL++LG   A+ +V  KGR AC I TGDELL+TEL+FNG
Sbjct: 829  RRRVQQALDVTQLEELKGRKRVLRRLGFTTAEDIVDTKGRVACEISTGDELLLTELIFNG 888

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
             FN L   Q AAL SCF+  +KS     LR EL  PL+ LQE+A++IA++  E KL V  
Sbjct: 889  VFNTLAPEQCAALLSCFVFDEKSEAPTKLREELTAPLRVLQETAKRIAKVARESKLPVVE 948

Query: 868  DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
            DEYV S  +  LM+ +  W +GA+F+E++++TD FEGS+IR  RRL E L Q+ AAA+A+
Sbjct: 949  DEYVMS-FKVELMESVLLWCRGASFSELLKLTDTFEGSLIRVFRRLQELLRQMTAAARAI 1007

Query: 928  GEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            G   LE+KF  +SE L R   ++F +SLYL
Sbjct: 1008 GNEELEEKFKKSSEMLERPNSVIFCSSLYL 1037


>gi|367007627|ref|XP_003688543.1| hypothetical protein TPHA_0O01420 [Tetrapisispora phaffii CBS 4417]
 gi|357526852|emb|CCE66109.1| hypothetical protein TPHA_0O01420 [Tetrapisispora phaffii CBS 4417]
          Length = 1075

 Score =  894 bits (2309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/965 (48%), Positives = 644/965 (66%), Gaps = 61/965 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+VA+P  Y   K    H            A+TY F LDPFQ  +++C++R ESVLVSAH
Sbjct: 123  HQVALPPNYDY-KPIGQHKRV-------NQARTYPFTLDPFQDTAISCIDRGESVLVSAH 174

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA + RDKQRVIYTSP+KALSNQKYREL  EF DVGLMTGD+T++P+A
Sbjct: 175  TSAGKTVVAEYAIAQSLRDKQRVIYTSPIKALSNQKYRELSAEFGDVGLMTGDITINPDA 234

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
             CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ERGVVWEE+II LP  ++ VFL
Sbjct: 235  GCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETIILLPDKVRYVFL 294

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ N+ +FAEWIC +H QPCH+VYTDFRPTPLQHY+FP  G G+YLVVDEK  FRE+N
Sbjct: 295  SATIPNSMEFAEWICKIHSQPCHIVYTDFRPTPLQHYLFPAHGDGIYLVVDEKSTFREEN 354

Query: 280  FVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKMIMERKFQPVIV 334
            F K   + +    G    +  A G+     KGG+  G +  DI+KIVKMI ++K+ PVIV
Sbjct: 355  FQKAMAS-ISNGAGDDPNSAVAKGKKGQSFKGGASKGDAKGDIYKIVKMIWKKKYNPVIV 413

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS+R+CE+ A+ MSKLDFN+++EKD + ++F NA+  L E DR LP I+ +LPLL+RG
Sbjct: 414  FSFSKRDCEELALKMSKLDFNSEDEKDALSKIFNNAIALLPENDRELPQIKHILPLLRRG 473

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+KWDG   R+
Sbjct: 474  IGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGKQFRW 533

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            +  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y  IL
Sbjct: 534  VSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMIL 593

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NLM R EG  + E ++++SF+QFQ   ++P + K   +LE++A  +    E  + EY+ +
Sbjct: 594  NLM-RVEG-ISPEFMLEHSFYQFQNVISVPIMEKTYLELEKKADEIYIEDEENIREYYDI 651

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGG-TDWGWGVVVNVVKK-------- 625
            +  +    + L   IT P  +L +L  GRLI V  GG  D+GW VV++ VK+        
Sbjct: 652  RKTLDGYNEDLRHVITHPANLLSFLQPGRLINVNIGGEQDYGWAVVIDFVKRVNKRDTSV 711

Query: 626  ------------------------------PSAGVGTLPSRGG----GYIVPVQLPLIST 651
                                          P    G  P   G      I+P+ L  I +
Sbjct: 712  VYSDHESYIVNVVVNTMYSNAPVNIIKPFNPVLPEGIRPIVKGEQPICAIIPITLESIKS 771

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            +  +RL +P D++    ++++  ++ E++ RFP G+P ++PVK+MKIED +   L+ +I 
Sbjct: 772  VGNLRLFMPKDIKASGQKETVAKSLNEVKRRFPDGVPLIDPVKNMKIEDEDFKTLLKKIV 831

Query: 712  ELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             LE KL+++PL  S   +++   F  K  ++ ++++LK K+ +SQ     D+L+ R RVL
Sbjct: 832  VLEEKLYSNPLANSVRLSELYDKFSIKFALHEDMKKLKKKINESQAVIQLDDLRRRKRVL 891

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            ++LG      +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL SCF   ++ 
Sbjct: 892  RRLGFSTPSDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQERC 951

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
             E   L+ ELA+PL+ ++E A KIA++  + K+EV   EYVES  R  LM+V+Y W KGA
Sbjct: 952  KEAPRLKPELAEPLKAMREVASKIAKVMKDSKIEVIEKEYVES-FRHELMEVVYEWCKGA 1010

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            TF ++ +MTD++EGS+IR  +RL+E +N+L   A+ +G   LE+K     + + R I+ +
Sbjct: 1011 TFTQICKMTDVYEGSLIRMFKRLEELVNELVNVARTIGNSALEEKMETIVKLIHRDIVSA 1070

Query: 951  NSLYL 955
             SLYL
Sbjct: 1071 GSLYL 1075


>gi|170116686|ref|XP_001889533.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635535|gb|EDQ99841.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1004

 Score =  892 bits (2306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/972 (48%), Positives = 633/972 (65%), Gaps = 67/972 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+VAVP GY  T     H     P       + Y FELDPFQ+VSV  ++RNESVLVSAH
Sbjct: 44   HQVAVPPGYDYTPISK-HTPPTKP------DREYKFELDPFQKVSVYAIQRNESVLVSAH 96

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA     KQRVIYTSP+KALSNQKYRE+  EF DVGLMTGDVT++P A
Sbjct: 97   TSAGKTVVAEYAIAQCLNRKQRVIYTSPIKALSNQKYREMLAEFGDVGLMTGDVTINPTA 156

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
            SCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ERGVVWEE+II LP +++ VFL
Sbjct: 157  SCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKERGVVWEETIILLPHSVRYVFL 216

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+FP GG G+YLVV+EK +FREDN
Sbjct: 217  SATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLFPAGGEGIYLVVNEKGEFREDN 276

Query: 280  FVKLQDTFLKQKIGGRRENGKASGRMAKGGSGS--------GGSDIFKIVKMIMERKFQP 331
            F K     L+  +G    + +A                   G SDI KI+KMIM + + P
Sbjct: 277  FSKAMGK-LQDNMGDDPADSRAGKGKKGKIKKGGDKKGLYLGPSDISKIIKMIMLKNYNP 335

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VIVFSFS+RECE  A++MSK +F + +E+D V  +F NA++ L E DR LP I  +LPLL
Sbjct: 336  VIVFSFSKRECEGLALTMSKFEFTSTDEQDLVTNIFNNAIENLAEADRQLPQISNLLPLL 395

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFTA +K+DG  
Sbjct: 396  RRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTAARKFDGRE 455

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R + SGEYIQMSGRAGRRG DDRG+ I+M DE+++    K MV G+   L S F L Y 
Sbjct: 456  FRNLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLDPAAAKGMVKGEADRLDSAFHLGYN 515

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +LNLM + EG  + E++++  F QFQ    +P +  ++   EEE + +    E  V++Y
Sbjct: 516  MVLNLM-KVEG-ISPEYMLERCFFQFQSSAGIPKLEDELKVEEEERSRVVIPDEELVSQY 573

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA-GV 630
            +  +  + Q+       +T PE  + +L  GRL+KV+    D+GWG+ VN  K+  A G 
Sbjct: 574  YDYRQQLDQMAADFREVVTHPEYSIPHLKPGRLVKVKYQKLDFGWGIAVNWQKRTDAKGR 633

Query: 631  G-----TLPS---------------------------------------RGGGYIVPVQL 646
            G     TLP+                                       +G   +VPV L
Sbjct: 634  GGPKTETLPAHEQYVVDVLLNCAPGGSVPKDRNVTAATPGGIQPCAPGQKGVPLVVPVLL 693

Query: 647  PLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
              I  +S +R+ +P DLRP   R++   ++ E++ RFP G+  L+P+++M I+D + +DL
Sbjct: 694  STIEGISHLRIYLPKDLRPDAGRETAWKSLLEVQRRFPDGIALLDPIENMGIKDSKFLDL 753

Query: 707  VNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            V +I+ +E K+F+ PL+K     ++   + +K E    I+ LK +++ +      +ELK 
Sbjct: 754  VKKIDIMEKKMFSSPLHKDPRLPELYTLYAKKKESQERIRSLKKRIQATYDVLQLEELKC 813

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R RVL++L    +  +V +KGR AC I +GDELL+TEL+FNG FN L   Q AAL SCF+
Sbjct: 814  RKRVLRRLAFTTSADIVDMKGRVACEISSGDELLLTELIFNGVFNPLTPEQCAALLSCFV 873

Query: 826  PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
              +KS +   L+ ELA PL+ +QE AR+IA++  E KL V+ DEYV S+ +  LMD +  
Sbjct: 874  FTEKSEQATKLKEELAAPLRVMQEIARRIAKVSKESKLAVDEDEYV-SSFKVELMDAVVQ 932

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W +GA+F+EV ++TD FEGS+IR  RRL E L Q+  AA+ +G   L++KF  ASE L R
Sbjct: 933  WCRGASFSEVCKLTDQFEGSLIRVFRRLSELLRQMTQAAKVIGNAELKEKFEKASEMLER 992

Query: 946  --GIMFSNSLYL 955
               ++F +SLYL
Sbjct: 993  PNSVIFCSSLYL 1004


>gi|297837559|ref|XP_002886661.1| hypothetical protein ARALYDRAFT_893587 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332502|gb|EFH62920.1| hypothetical protein ARALYDRAFT_893587 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  892 bits (2306), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/965 (47%), Positives = 636/965 (65%), Gaps = 61/965 (6%)

Query: 38  CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           CVH+V+ P  Y            A  V+    AK + F LD FQ  ++ CL+  ESV+VS
Sbjct: 38  CVHDVSFPENYV---------PLAPSVHAKPPAKNFPFTLDSFQSEAIKCLDNGESVMVS 88

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT VA YAIAM+ ++ QRVIYTSP+KALSNQKYR+  +EF DVGLMTGDVT+ P
Sbjct: 89  AHTSAGKTVVASYAIAMSLKENQRVIYTSPIKALSNQKYRDFKEEFSDVGLMTGDVTIDP 148

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
           NASCLVMTTEILR M Y+GSE+++EVAW+IFDE+HYM+D ERGVVWEESI+  P   + V
Sbjct: 149 NASCLVMTTEILRSMQYKGSEIMREVAWIIFDEVHYMRDSERGVVWEESIVMAPKNSRFV 208

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA +FA+W+  +H+QPCH+VYTD+RPTPLQHYVFP GG+GLYLVVDEK +F E
Sbjct: 209 FLSATVPNAKEFADWVAKVHQQPCHIVYTDYRPTPLQHYVFPAGGNGLYLVVDEKAKFHE 268

Query: 278 DNFVKLQDTFLKQKIGG-RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
           D+F K  +  +    G  +R+NGK+   +  G  G   SDIFK+VKMI++R++ PVI+FS
Sbjct: 269 DSFQKSLNALVPTNEGDKKRDNGKSQKGLVMGKLGE-ESDIFKLVKMIIQRQYDPVILFS 327

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FS++ECE  AM MSK+D N+ +EKD VE +F +A+D L+++D+ LP +  +LP+LKRGI 
Sbjct: 328 FSKKECEALAMQMSKMDLNSDDEKDAVETIFTSAIDMLSDDDKKLPQVSNILPILKRGIG 387

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
           VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  R++ 
Sbjct: 388 VHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLS 447

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
           SGEYIQMSGRAGRRG D RGICI+MVDE+ME    K M+ G    L S F LSY  +LN 
Sbjct: 448 SGEYIQMSGRAGRRGIDKRGICILMVDEKMEPAVAKSMLKGSADSLNSAFHLSYNMLLNQ 507

Query: 517 MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
           +   EG    E++++NSF QFQ ++A+PD+ K++  LEEE  S+    E  +  Y+ L L
Sbjct: 508 LRCEEGD--PENLLRNSFFQFQADRAIPDLEKQIKSLEEERDSMVIEEEESLKNYYNLIL 565

Query: 577 DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW-----------GWGVVV--NVV 623
               L+K +   +  P+  L +L   R + +     D             WGV++  N V
Sbjct: 566 QYKSLKKDIREIVFIPKYCLPFLLPNRAVCLDCTNDDEETQSFSIEDQDTWGVIMKFNKV 625

Query: 624 K---------KP-----SAGVGT------------------LPSRGGGYIVPVQLPLIST 651
           K         +P     S  V T                  +  RG   +V V L  I +
Sbjct: 626 KSLSEDDDNRRPEDANYSVDVLTRCMVSKDGVGKKKVKAVPIKERGEPVVVTVLLSQIKS 685

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
           LS   +++P DL PL+AR++ L  V EL +R P G+P L+P  DMKI+       V ++E
Sbjct: 686 LSSAIMNIPKDLVPLEARENALKKVSELLARHPDGIP-LDPEVDMKIKSSSYKKTVRRLE 744

Query: 712 ELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
            LE+    H + KS     +++    K E+  +I+ LK  +R S    F+DELK R RVL
Sbjct: 745 ALENLFEKHKIAKSPLITEKLKVLHMKEELTAKIKSLKKTVRSSTALAFKDELKARKRVL 804

Query: 771 KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
           ++LG+I +D VV+LKG+ AC I + +EL +TELMF+G F D    ++ +L SCF+  ++ 
Sbjct: 805 RRLGYITSDNVVELKGKVACEISSAEELTLTELMFSGIFKDAKVEELVSLLSCFVWRERV 864

Query: 831 SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
            +    R EL     QLQ++AR++AE+Q +CK+E++V+ +V+S  RP +M+ ++ W+KG+
Sbjct: 865 PDAAKPREELDLLFIQLQDTARRVAELQLDCKVEIDVESFVQS-FRPDIMEAVHAWAKGS 923

Query: 891 TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            F EV+++  +FEGS+IR+ RR++E L QL  AA+++GE  LE K   A   ++R I+F+
Sbjct: 924 KFYEVMEIARVFEGSLIRAIRRMEEVLQQLIVAAKSIGETQLEAKLEEAVSKIKRDIVFA 983

Query: 951 NSLYL 955
            SLYL
Sbjct: 984 ASLYL 988


>gi|296475815|tpg|DAA17930.1| TPA: superkiller viralicidic activity 2-like 2 [Bos taurus]
          Length = 935

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/846 (52%), Positives = 587/846 (69%), Gaps = 54/846 (6%)

Query: 38  CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 108 CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 156

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 157 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 216

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 217 NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 276

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   F
Sbjct: 277 YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDF 336

Query: 276 REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
           REDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+F
Sbjct: 337 REDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIF 390

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI
Sbjct: 391 SFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVENVLPLLKRGI 450

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I
Sbjct: 451 GIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWI 510

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LN
Sbjct: 511 SSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLN 570

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
           L+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++
Sbjct: 571 LL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIR 628

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--------- 626
             +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK          
Sbjct: 629 QQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGEL 688

Query: 627 -------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDL 663
                              SA     P+    +G   +VPV + L+S +S +RL +P DL
Sbjct: 689 DPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDL 748

Query: 664 RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL- 722
           RPLD RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL 
Sbjct: 749 RPLDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLH 808

Query: 723 NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
           N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+
Sbjct: 809 NDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVI 868

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
           ++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA 
Sbjct: 869 EMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAG 928

Query: 843 PLQQLQ 848
           PL+Q+Q
Sbjct: 929 PLRQMQ 934


>gi|50310243|ref|XP_455141.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644277|emb|CAG97848.1| KLLA0F01364p [Kluyveromyces lactis]
          Length = 1073

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/988 (47%), Positives = 654/988 (66%), Gaps = 68/988 (6%)

Query: 20   TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDP 79
            T T + ES  K + L     H+VA+P  Y        +    + V   E A+TY F LDP
Sbjct: 102  TQTVQLESDGKVK-LRHQVRHQVALPPNYD-------YKPIGDHVRTNE-ARTYPFTLDP 152

Query: 80   FQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL 139
            FQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL
Sbjct: 153  FQDTAISCIDRMESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYREL 212

Query: 140  HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRER 199
              EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ER
Sbjct: 213  LAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKER 272

Query: 200  GVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFP 259
            GVVWEE+II LP  +  VFLSAT+ NA +FAEWIC +H QPCH+VYTDFRPTPLQHY+FP
Sbjct: 273  GVVWEETIILLPDKVHYVFLSATIPNAMEFAEWICRIHSQPCHIVYTDFRPTPLQHYLFP 332

Query: 260  VGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ------KIGGRRENGKASGRMAKGGSGSG 313
              G G++LVVDEK  FRE+NF K   +   Q       I GR + G++     KGG+  G
Sbjct: 333  AHGDGIHLVVDEKGTFREENFQKAMASISNQTGDDVHTINGRGKKGQS----YKGGAAKG 388

Query: 314  GS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV 371
             +  DI+KIV+MI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN++EEK+ + ++F+NA+
Sbjct: 389  DAKGDIYKIVRMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSEEEKEALTKIFKNAI 448

Query: 372  DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
            D L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++G
Sbjct: 449  DLLPESDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIG 508

Query: 432  LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTL 491
            LNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    
Sbjct: 509  LNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVA 568

Query: 492  KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS 551
            K MV G+   L S F L Y  ILNLM R EG  + E +++NSF QFQ   ++P + KKV+
Sbjct: 569  KGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLENSFFQFQNAISVPVMEKKVA 626

Query: 552  KLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EG 610
            +L     S+    E  V EY++++  +    + + + IT P   L +L  GRLI V+ + 
Sbjct: 627  ELTSVLESIKVDDEPAVKEYYEIRKTLDGYNEDVRTIITHPANSLAFLQPGRLINVKIDN 686

Query: 611  GTDWGWGVVVNVVKK--------------------------------------PSAGVGT 632
              D+GW  VV+ VK+                                      P+   G 
Sbjct: 687  KYDYGWAAVVDFVKRTNKRNPTAVYSDEESYIVNVVVNTMYADSPINLIKPFNPTFPEGI 746

Query: 633  LPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
             P+  G      I+P+ L  I ++  IRL +P D++    + ++   ++E   RFP G+P
Sbjct: 747  RPAEQGEKSTCTIIPITLSSIQSIGNIRLYMPNDIKAESQQATVGKTLREALRRFPDGVP 806

Query: 689  KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQL 747
             ++PVK+MKI+D + + L+ +IE LE +L+++PL  +    ++   +  K  +  +I+ L
Sbjct: 807  IVDPVKNMKIDDDDFLKLLKKIEVLEGRLYSNPLTNTVRLRELYEKYSNKVAIEADIKNL 866

Query: 748  KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
            K K+ ++Q     D+L+ R RVL++LG      +++LKGR AC I +GDELL+TEL+FNG
Sbjct: 867  KHKINEAQAVIQLDDLRRRKRVLRRLGFCTQSDIIELKGRVACEISSGDELLLTELIFNG 926

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
             FN+L   Q AAL SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+E+  
Sbjct: 927  NFNELSPAQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREVAGKIAKIIKDSKIELVE 986

Query: 868  DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
             EYVES  R  LM+V+Y W +GA+F ++ +MTD++EGS+IR  +RL+E + +L   ++ +
Sbjct: 987  KEYVES-FRHELMEVVYEWCQGASFTQICKMTDVYEGSLIRMFKRLEEMIKELIDVSKTI 1045

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G   L++K  AA   + R I+ + SLYL
Sbjct: 1046 GNATLKEKMEAALNLIHRDIVSAGSLYL 1073


>gi|444321068|ref|XP_004181190.1| hypothetical protein TBLA_0F01280 [Tetrapisispora blattae CBS 6284]
 gi|387514234|emb|CCH61671.1| hypothetical protein TBLA_0F01280 [Tetrapisispora blattae CBS 6284]
          Length = 1071

 Score =  892 bits (2305), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 477/989 (48%), Positives = 654/989 (66%), Gaps = 72/989 (7%)

Query: 20   TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFE 76
            T   EE+   K ++  R   H+VA+P  Y  +           P+   E    A+TY F 
Sbjct: 102  TTQVEEDGKVKLKHQVR---HQVALPPNYDYS-----------PIAEHERKNEARTYPFT 147

Query: 77   LDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKY 136
            LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKY
Sbjct: 148  LDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKY 207

Query: 137  RELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKD 196
            REL  EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D
Sbjct: 208  RELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRD 267

Query: 197  RERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHY 256
            +ERGVVWEE+II LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYTDFRPTPLQHY
Sbjct: 268  KERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHFQPCHIVYTDFRPTPLQHY 327

Query: 257  VFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSGS 312
            +FP  G G+YLVVDEK  FRE+NF K   +   Q   G   N   S    G+  KGGS  
Sbjct: 328  LFPAHGDGIYLVVDEKSTFREENFQKAMASISNQ--SGDDPNSVNSRGKKGQTFKGGSSK 385

Query: 313  GGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
            G +  DI+KIVKMI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN++EEKDT+ ++F NA
Sbjct: 386  GDARGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSEEEKDTLSKIFNNA 445

Query: 371  VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
            +  L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++
Sbjct: 446  IALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSI 505

Query: 431  GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT 490
            GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME   
Sbjct: 506  GLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQV 565

Query: 491  LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
             K MV G+   L S F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK+
Sbjct: 566  AKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPKMEKKL 623

Query: 551  SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-E 609
             +L ++   +    E  + +Y++LK  + +  + +   IT P  VL +L  GR+I+V+  
Sbjct: 624  IELNKDYEGIKIEDEEIIKDYYELKQTLDKYYQDVRHVITHPANVLSFLQPGRMIQVKIN 683

Query: 610  GGTDWGWGVVVNVVKK-----PSAG---------------------------------VG 631
               D+GWGVV++  K+     P+AG                                 +G
Sbjct: 684  NQIDYGWGVVIDFNKRLNKRNPTAGYSDHESYIVNVVVNTMYGDSPINLIKPHNPDLPIG 743

Query: 632  TLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL 687
              P+    +    I+P+ L  IS +  +RL +P D+R    ++ +  ++ E++ RFP G+
Sbjct: 744  IRPALPNEKKICAIIPITLESISQVGSLRLYMPKDIRASGQKEVVGKSLVEVKRRFPDGI 803

Query: 688  PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQ 746
            PK++P+K+MKIED E V L  +I  LE KL ++ L  S   + +   +++K  +   IQ 
Sbjct: 804  PKIDPIKNMKIEDDEFVKLNRKINVLEEKLKSNALTGSVKLDSLYEQYKKKNGIRENIQV 863

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            LK K+ + Q     ++L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FN
Sbjct: 864  LKHKIMECQSVIQLEDLRRRKRVLRRLGFCTMNDIIELKGRVACEISSGDELLLTELIFN 923

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
            G FN+L   Q AAL SCF   ++  E   L+ EL +PL+ L+E A  IA+I  E K+E+ 
Sbjct: 924  GNFNELSAEQCAALLSCFAFQERCKETPRLKPELGEPLKNLKELASNIAKIMKESKIEIV 983

Query: 867  VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
              +YV+S  R  LM+V++ W KGATF ++ +MTD++EGS+IR  +RL+E + +L   A  
Sbjct: 984  EKDYVDS-FRHELMEVVFEWCKGATFTQICKMTDVYEGSLIRMFKRLEELVKELVEVANT 1042

Query: 927  VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +G V L++K     E + R I+ + SLYL
Sbjct: 1043 IGNVALKEKMELILELIHRDIVSAGSLYL 1071


>gi|453080597|gb|EMF08648.1| ATP-dependent RNA helicase DOB1 [Mycosphaerella populorum SO2202]
          Length = 1084

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/937 (49%), Positives = 626/937 (66%), Gaps = 55/937 (5%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            AK + F LDPFQ VSVA +ERNESVLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+K
Sbjct: 152  AKVFPFTLDPFQEVSVASIERNESVLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIK 211

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYRE + EF D GLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+FD
Sbjct: 212  ALSNQKYREFNAEFGDCGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFD 271

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HYM+DR RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFR
Sbjct: 272  EVHYMRDRARGVVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKIHNQPCHVVYTDFR 331

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA--- 306
            PTPLQHY FP    G++L+VDEK  FRE+NF K     +  K G    +  A  +     
Sbjct: 332  PTPLQHYFFPASADGIHLIVDEKGVFREENFNKAM-AAIADKAGDDGSDPLAKRKGRGKD 390

Query: 307  ----KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
                KGG   G +DI+KIVKMIM + + PVIVFSFS+R+CE +A+ MS+L FN + EK  
Sbjct: 391  KKTNKGGKKDGPTDIYKIVKMIMLKNYNPVIVFSFSKRDCENYALQMSQLAFNDESEKAM 450

Query: 363  VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            V +VF +A++ L++ED+ LP I+ +LPLL+RGI +HHSGLLP++KE +E+LFQEGL+K L
Sbjct: 451  VSKVFDSAIEMLSDEDKQLPQIQHILPLLRRGIGIHHSGLLPILKETIEILFQEGLIKVL 510

Query: 423  FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
            FATETF++GLNMPAKTVVFTAV+K+DG   R++   E+IQMSGRAGRRG D+RGI I+M+
Sbjct: 511  FATETFSIGLNMPAKTVVFTAVRKFDGRELRWVTPSEFIQMSGRAGRRGLDERGIVIMMI 570

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            DE+M+    K++V G+   L S F L Y  ILNLM R EG  + E +++  F QFQ   +
Sbjct: 571  DEKMDPPVAKEIVKGEQDKLNSAFYLGYNMILNLM-RVEG-ISPEFMLERCFFQFQNAAS 628

Query: 543  LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
            +  I K++ +LE++ A      EA++ EY+ L+  +      +   I+ P+ +  ++ SG
Sbjct: 629  VSSIEKQLMELEQKRADAVIEDEAQIKEYYDLRQSLETYSSDMKKVISHPQYLCKFMQSG 688

Query: 603  RLIKVREGGTDWGWGVVVNVVK-KPSAG--------------------------VGT--- 632
            RL+KV+  G D+GWGVVVN +K KP+ G                           GT   
Sbjct: 689  RLVKVKHNGQDFGWGVVVNFMKVKPARGQSEDDMNIGHSVVIDVLLNIAADSSAPGTSSQ 748

Query: 633  ----LPS---------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
                +P          +G   +VPV    I  +  IR+ +P DLR  + R ++  +++E+
Sbjct: 749  LRDDMPKEVRPCEPGEKGKMEVVPVMNGTIDAVGHIRVFLPNDLRTSEQRNTVRKSLEEV 808

Query: 680  ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKA 738
              RFP G+  L+P+++M I+D     L+ +IE LEHKL  +PL+ S    +    +  K 
Sbjct: 809  ARRFPDGVAVLDPIENMGIDDDSFKKLLRKIEVLEHKLLNNPLHTSDKLPDLYDRYAAKI 868

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
            E+ +EI+  + KM D+      DELKNR RVL++LG ++   VVQLK R AC I TGDEL
Sbjct: 869  EITNEIKATRKKMTDALSVLQLDELKNRKRVLRRLGFVNEADVVQLKARVACEISTGDEL 928

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            +++EL+FN  FN+L   Q AA  S FI  +KS E   L+ +LAK  +++Q  AR+IA++ 
Sbjct: 929  VLSELLFNRFFNELTPEQCAATLSVFIFEEKSDEAPALKEDLAKAFREIQAQARQIAKVS 988

Query: 859  NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
             ECK+ VN +EY++   +  LMDV++ W  GA+FAE+ +MTD++EGS+IR  RRL+E L 
Sbjct: 989  MECKVLVNEEEYIQG-FKHQLMDVVFSWCNGASFAEICKMTDVYEGSLIRLFRRLEELLR 1047

Query: 919  QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            Q+  A++ +G  +LEKKF  A   +RR I+ + SLYL
Sbjct: 1048 QMAQASKVMGSEDLEKKFEGALGKVRRDIVAAQSLYL 1084


>gi|302690984|ref|XP_003035171.1| hypothetical protein SCHCODRAFT_51157 [Schizophyllum commune H4-8]
 gi|300108867|gb|EFJ00269.1| hypothetical protein SCHCODRAFT_51157 [Schizophyllum commune H4-8]
          Length = 1020

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 479/1005 (47%), Positives = 647/1005 (64%), Gaps = 72/1005 (7%)

Query: 7    AGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYN 66
            A +  AP   L  TG P E +  +  ++ R   H+VAVP GY        H   A P   
Sbjct: 32   AKREVAPSAGL--TGGPAETAPVQLGHMVR---HKVAVPQGYNYIPISQ-HVPPAKP--- 82

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
                + Y FELDPFQRVSV  ++RNESVLVSAHTSAGKT VAEYAIA     KQRVIYTS
Sbjct: 83   ---DREYKFELDPFQRVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQCLNRKQRVIYTS 139

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYRE+  EF DVGLMTGD T++P+A+CLVMTTEILR MLYRGSE+++EVAWV
Sbjct: 140  PIKALSNQKYREMSSEFGDVGLMTGDTTINPSATCLVMTTEILRSMLYRGSEIMREVAWV 199

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDEIHYM+D+ERGVVWEE+II LP +++ VFLSAT+ NA +FAEWI   H+QPCHVVYT
Sbjct: 200  IFDEIHYMRDKERGVVWEETIILLPHSVRYVFLSATIPNAMEFAEWITQSHEQPCHVVYT 259

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
            DFRPTPLQHY+FP GG G+YLVV+EK +FREDNF K     L+   G    +  A     
Sbjct: 260  DFRPTPLQHYLFPAGGEGIYLVVNEKSEFREDNFAKAMGK-LQDGTGDDPSDPFAGKGKG 318

Query: 307  KGGSGSGG------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
            K     G       SDI KI+K+IM + + PVIVFSF++R+CE +AMSMSK+++N  +E+
Sbjct: 319  KKLKKGGDKKGICPSDIAKIIKVIMNKNYNPVIVFSFAKRDCESNAMSMSKMEYNNADEQ 378

Query: 361  DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             TV ++F+NA   ++  DR LP I  +LPLL+RGI +HH GLLP++KE++E+LFQ GL+K
Sbjct: 379  ATVTEIFENATASISPSDRQLPQITNLLPLLRRGIGIHHGGLLPILKEMIEILFQAGLIK 438

Query: 421  ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
             LFATETF++GLNMPAKTVVFT V+K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+
Sbjct: 439  VLFATETFSIGLNMPAKTVVFTDVQKFDGREFRNLSSGEYIQMSGRAGRRGLDDRGVVIM 498

Query: 481  MVDE-QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
            MV+E        + M+ G+   L S F L Y  I+NLM + EG  + E +++  F QFQ 
Sbjct: 499  MVNERLSRRRQARRMIKGEADRLDSAFHLGYNMIINLM-KVEG-ISPEFMLERCFFQFQS 556

Query: 540  EKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            + ++P + K + K E E   +    E  +AEY+  +  + QL +     IT P   L +L
Sbjct: 557  KASVPVLQKDLEKAEAERDKMKIPDEHLIAEYYDCRQQLDQLGEDFRQVITHPTYSLPFL 616

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKK-----PSAGVGTLPS------------------- 635
              GRLIKV+    D+GWGVV+N  K+         +G LP                    
Sbjct: 617  QPGRLIKVKYKKLDFGWGVVINYQKRLPPKNRPVDLGNLPPHSQYIVDVLLNIARAPYQP 676

Query: 636  ----------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSIL 673
                                  RG   +VP+ L +I  +S +R+ +P D+R  +AR+++ 
Sbjct: 677  LPKGQTWSPEKAAFVQPCPPGERGLPVVVPILLDVIEGISHVRIFLPKDMRSENARETVW 736

Query: 674  LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-R 732
             +V E++ RFP+G+  L+PV++M I+D +   L+ +I  LE KLF+ P++K     ++  
Sbjct: 737  KSVLEVQRRFPEGIALLDPVQNMGIKDDKFQALLKKIALLESKLFSSPMHKDPRLPELFT 796

Query: 733  CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
             +  K +    +++LK +++ +      DELK R RVL++LG   AD +V +KGR AC I
Sbjct: 797  AYALKHQAMERVRELKQRIQQTHDILQLDELKCRKRVLRRLGFTTADDIVDMKGRVACEI 856

Query: 793  DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
             TGDELL+TEL+FNG FN L     AAL SCF+  +KS + + L+ +LA PL+ LQE+AR
Sbjct: 857  STGDELLLTELVFNGVFNPLSPEHCAALLSCFVFDEKSEQVVKLKEDLAGPLRTLQETAR 916

Query: 853  KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            +IA++  ECKL V+ D YV+S  +  LMD +  W KGA+FAE+ ++TD+FEGS+IR  RR
Sbjct: 917  RIAKVSKECKLPVDEDAYVQS-FKVELMDCVLQWCKGASFAEICKLTDVFEGSLIRVFRR 975

Query: 913  LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            L E L Q+  AA+ +G   L++KF  A+E L R   ++F +SLYL
Sbjct: 976  LGELLRQMSTAAKVIGNTELQEKFDKATEILERPNSVIFCSSLYL 1020


>gi|241957593|ref|XP_002421516.1| DEAD-box ATP-dependent RNA helicase, putative; mRNA export/exosome
            component, putative [Candida dubliniensis CD36]
 gi|223644860|emb|CAX40855.1| DEAD-box ATP-dependent RNA helicase, putative [Candida dubliniensis
            CD36]
          Length = 1068

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/993 (46%), Positives = 644/993 (64%), Gaps = 69/993 (6%)

Query: 13   PEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--- 69
            P E L  + T + ++  K ++  R   H+VA+P  Y              P+  GE    
Sbjct: 95   PSEGLSNSATTDPDNKLKLKHQIR---HQVAIPPSYPYV-----------PI--GEHKRK 138

Query: 70   --AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
              A+TY F LDPFQ  +++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP
Sbjct: 139  HEARTYPFTLDPFQDTAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSP 198

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+REL   F DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWV+
Sbjct: 199  IKALSNQKFRELQAIFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVV 258

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HYM+D+ RGVVWEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTD
Sbjct: 259  FDEVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD 318

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASG 303
            FRPTPLQHY+FP GG G++LVVDEK  FRE+NF K    + D             G   G
Sbjct: 319  FRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMATISDNSGDDPAANDSGRGNKKG 378

Query: 304  RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
            +  KG +  G  DI+KIVKMI  +K+ PVIVFSFS+R+CE  A+ MSKLDFNT EE++++
Sbjct: 379  KTNKGRNHDGKGDIYKIVKMIYMKKYNPVIVFSFSKRDCESLALKMSKLDFNTDEERNSL 438

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
             Q+F NA++ L E DR LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K LF
Sbjct: 439  TQIFYNAIELLPEADRELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLF 498

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+D
Sbjct: 499  ATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMID 558

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            E+ME    K MV G+   L S F L Y  ILNLM R EG  + E +++NSF QFQ   ++
Sbjct: 559  EKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLENSFFQFQKASSV 616

Query: 544  PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
            P +  K+++ ++E A +    E  + +Y+ LK  + +  + +   IT P  +L +L  GR
Sbjct: 617  PVLEGKLAQCKQEFADITIEDEPIIKDYYDLKQQLLKYNEDVRKVITHPGNILAFLQDGR 676

Query: 604  LIKVREGGTDWGWGVV----------------------------------VNVVKK--PS 627
            +IKV+ G  D+GWG+V                                  VN++KK  P 
Sbjct: 677  VIKVKIGDHDYGWGMVTTFTKRNRRHQEEFTPHEAYVVEVFVTTMFIDSPVNLIKKFNPL 736

Query: 628  AGVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF 683
               G  P++ G       + + L  I  +S +RL VP D +   A+++++  +++L  R 
Sbjct: 737  LPEGIRPAKAGEQTRAEFISITLSSIEKISTVRLRVPDDYKSSTAKRTLVKTLKDLPKRL 796

Query: 684  PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNH 742
            P G+P ++PV+ MKI D +   L+ +I+ L+ K+ ++PLN S   + +   +  K ++N 
Sbjct: 797  PDGIPLIDPVQSMKITDDDFKKLLQKIDILDSKIVSNPLNNSARLDDLYAKYTAKVDLNK 856

Query: 743  EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
            +I++L+ ++  ++     D+L N  RVLKKL    ++ VV+LKGR A  + TGDEL++TE
Sbjct: 857  QIKKLEDQIFQAKSIIQLDQLANMKRVLKKLEFTGSEEVVELKGRVAAELSTGDELMITE 916

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+F+G FN+L   Q+  L S FI  +++ E   L+ ELA+P + + E+A KIA+I  +  
Sbjct: 917  LLFSGFFNELTPQQICGLLSAFIFQERAKELPKLKPELAEPAKVIHETANKIAKISKQSG 976

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            LE+   +Y+E      L++V++ WS GA+F+ + +MTDI+EGSIIR+ RR  E + QL  
Sbjct: 977  LEIVEKDYIEQ-FNLALVEVVFVWSNGASFSSICKMTDIYEGSIIRALRREIELIKQLVD 1035

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A++ +G   L  KF    E + R  +  +SLY+
Sbjct: 1036 ASKIIGNQELVDKFEKCIELINRDFVQVSSLYM 1068


>gi|405119973|gb|AFR94744.1| ATP-dependent RNA helicase DOB1 [Cryptococcus neoformans var. grubii
            H99]
          Length = 1068

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/989 (47%), Positives = 638/989 (64%), Gaps = 62/989 (6%)

Query: 15   EDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYS 74
            +D      P +E+  K   L     H+VA+P  Y        H     P      A+TY 
Sbjct: 94   KDFADVTAPGQEAKLK---LVHQVRHQVAIPPDYPYIPINQ-HKRKDPP------ARTYK 143

Query: 75   FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
            FELDPFQ VS +C+ERNESVLVSAHTSAGKT VAE+AIA   ++ +RV+YTSP+KALSNQ
Sbjct: 144  FELDPFQFVSTSCIERNESVLVSAHTSAGKTVVAEFAIATCLKEGRRVVYTSPIKALSNQ 203

Query: 135  KYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM 194
            K+RE  + F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM
Sbjct: 204  KFREFTETFGDVGLMTGDVTINPEASCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYM 263

Query: 195  KDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQ 254
            +D+ERGVVWEE+II LP +++ VFLSAT+ N+ +FAEWIC  H+QPCHVVYTDFRPTPLQ
Sbjct: 264  RDKERGVVWEETIILLPHSVRYVFLSATIPNSMEFAEWICRTHEQPCHVVYTDFRPTPLQ 323

Query: 255  HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG- 313
            HY+FP G  G+YLVVDEK  FR+DNF K     L Q  G    N              G 
Sbjct: 324  HYLFPAGSEGIYLVVDEKSNFRDDNFQKAMAA-LAQGQGEDPANPSGGKGKKGKTKKGGA 382

Query: 314  ----GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                 SDI+KIV++IM R   PVI+F+FS+RECE  AM M K DFNT +E  TV QVF++
Sbjct: 383  LKGETSDIYKIVQLIMRRNLNPVIIFAFSKRECEDLAMQMQKFDFNTPDEAATVAQVFES 442

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            A+  L+E+D+ L  IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+KALFATETF+
Sbjct: 443  AIGSLSEDDKKLSQIEGILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKALFATETFS 502

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
            +GLNMPAKTVVFT+V+K+DG   R +  GEYIQMSGRAGRRG D RGI I+M DE++E  
Sbjct: 503  IGLNMPAKTVVFTSVRKFDGKDFRNLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPE 562

Query: 490  TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
              K MV G+   L S F L Y  I+NLM R EG  + E++++  F QFQ   ++P + K+
Sbjct: 563  AAKGMVKGQADRLDSAFHLGYNMIINLM-RVEG-VSPEYMLERCFFQFQNSMSVPVLEKQ 620

Query: 550  VSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
            + + E E  ++    E E+ EY+ L+  + +  +   + IT P   L +L +GRL+++R+
Sbjct: 621  LKEAETEKDAIVIEREDEIEEYYDLRQQLKERGQDFQAVITHPAYCLRFLQAGRLVEIRD 680

Query: 610  GGTDWGWGVVV-------------------------------------NVVKKPSAGVGT 632
            G  D+GWGVVV                                     ++ +  SA   +
Sbjct: 681  GDKDFGWGVVVAFNKVVNQRGRPPIWTDQDPPQKQYIVDVLTRVETGASIPRDRSASEIS 740

Query: 633  LPS---RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
             PS   +G   I+   L  + ++S+ R+++P DLR    + +   AV E++ R P G P 
Sbjct: 741  PPSGADKGEVAIIACSLSTVQSISQYRVNLPKDLRGQQEKNTAFRAVIEIKKRMPDGPPL 800

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLK 748
            L+P+K M I D   VDLV +I  LE++L A  + KS +  ++   + RK +    ++ LK
Sbjct: 801  LDPIKSMGISDKSFVDLVKKIALLENRLQALEITKSPELPRLYDLYDRKQKSIQSVKSLK 860

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
             ++         +ELK+R RVL++LG   AD VV++KGR AC I TGDEL++TE+MF GT
Sbjct: 861  RRINSVHDILQLEELKSRKRVLRRLGFTTADDVVEMKGRVACEISTGDELMLTEMMFGGT 920

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            F  L   Q AAL SCF+  +KS  ++ L+ ELA PL+ LQE+A++IA++ NE  + +  D
Sbjct: 921  FGTLAPEQCAALLSCFVFQEKSEAKVRLKEELAAPLRTLQETAKRIAKVSNESGIAIVED 980

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            EYV+S  +  +MDV+  W KGA F+++ +MTD+FEGSIIR  RRL E + Q+  AA A+G
Sbjct: 981  EYVQS-FKVEMMDVVLQWCKGAKFSQICEMTDVFEGSIIRCFRRLQELIRQMGQAAHAIG 1039

Query: 929  EVNLEKKFAAASESLRR--GIMFSNSLYL 955
               LE+KFA + E L R   ++F+ SLYL
Sbjct: 1040 NTELEEKFAKSMELLERPNTVVFNPSLYL 1068


>gi|222616907|gb|EEE53039.1| hypothetical protein OsJ_35761 [Oryza sativa Japonica Group]
          Length = 991

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/965 (48%), Positives = 639/965 (66%), Gaps = 63/965 (6%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGE---MAKTYSFELDPFQRVSVACLERNES 93
           +CVH+V+ P GY  +   A H    N V   E    AKT+ F+LDPFQ  ++ CL+  ES
Sbjct: 44  ACVHDVSYPEGYDPSA-PATH--LLNGVGGAEGAGPAKTFPFQLDPFQAEAIRCLDNGES 100

Query: 94  VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
           V+VSAHTSAGKT VA YAIAM+ R++QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDV
Sbjct: 101 VMVSAHTSAGKTVVALYAIAMSLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDV 160

Query: 154 TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
           T+ PNASCLVMTTEI R M Y+GSEV++EVAW+IFDE+HYM+DRERGVVWEESI+  P  
Sbjct: 161 TIEPNASCLVMTTEIWRSMQYKGSEVMREVAWIIFDEVHYMRDRERGVVWEESIVMAPKN 220

Query: 214 IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            + VFLSAT+ NA +FA+W+  +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVDEK 
Sbjct: 221 SRFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVDEKS 280

Query: 274 QFREDNFVK-LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           +FRED+F K L       +   +RENGK    +   G  S  SDIFK+VKMI++R++ PV
Sbjct: 281 KFREDSFQKGLNALVPASENDKKRENGKWQKGLLT-GKPSEDSDIFKMVKMIIQRQYDPV 339

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           I+FSFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP +  MLPLLK
Sbjct: 340 ILFSFSKRECEFLAMQMAKMDLNDDDEKANIETIFWSAMDLLSDDDKKLPQVSNMLPLLK 399

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  
Sbjct: 400 RGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDRF 459

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R++ SGEYIQMSGRAGRRG D RGICI+MVDE+ME +T K ++ G    L S F LSY  
Sbjct: 460 RWLSSGEYIQMSGRAGRRGIDQRGICILMVDEKMEPSTAKMILKGSADSLNSAFHLSYNM 519

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYH 572
           +LN +   +G    E ++++SF+QFQ ++ LPD+ K+V +LE E  S+    E  +  Y+
Sbjct: 520 LLNQIRCEDGD--PEKLLRHSFYQFQADRVLPDLEKQVKELELERNSMIIEEEENLKSYY 577

Query: 573 KLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR----EGGT-----DWGWGVVVNV- 622
            L      L+K +   +  P+ VL +L  GRL +V+    E  T     +  WGV +N  
Sbjct: 578 DLLQQYKNLKKDVRDIVHSPKYVLPFLQPGRLARVQYSTDEQSTFSIDENITWGVTINFE 637

Query: 623 -------------------------VKKPSAGVGTL---PSRGGGYIVPVQLPL--ISTL 652
                                    V K  +G  T+   P +  G  V + LPL  I  L
Sbjct: 638 KVKTHSEDRRPEDSDYTVDVLTRCSVSKDKSGKKTMKIIPLKDRGEPVVISLPLSQIDGL 697

Query: 653 SKIRLSVPPDLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIE 711
           S IR+ +P DL P++AR++ L  V E+ SRF + G+P L+P +DMK++         +IE
Sbjct: 698 SSIRMHIPKDLLPVEARENTLRKVDEVISRFAKDGIPLLDPEEDMKVQSSSFRKASRRIE 757

Query: 712 ELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
            LE     H + N    + +++    K E++ +I+ +K  MR S    F+DELK R RVL
Sbjct: 758 ALESLFEKHDVHNSPHIKQKLKVLHAKQELSTKIKAIKRTMRSSTALAFKDELKARKRVL 817

Query: 771 KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
           ++LG+I ++ VV++KG+ AC I + DEL +TELMF+GT  D    Q+  L     P    
Sbjct: 818 RRLGYITSEDVVEVKGKVACEISSADELTLTELMFSGTLKDATVEQMEKLQDAPKP---- 873

Query: 831 SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
                 R EL     QLQE+AR++A +Q +CK++++V+ +V S  RP +M+ +Y W+KG+
Sbjct: 874 ------REELDLLFFQLQETARRVANLQLDCKIQIDVESFVNS-FRPDIMEAVYSWAKGS 926

Query: 891 TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            F ++++MT +FEGS+IR+ RRL+E L QL  A++++GE  LE K   A   ++R I+F+
Sbjct: 927 KFYQIMEMTQVFEGSLIRAIRRLEEVLQQLILASKSIGETQLEAKLEEAVSKIKRDIVFA 986

Query: 951 NSLYL 955
            SLYL
Sbjct: 987 ASLYL 991


>gi|224003637|ref|XP_002291490.1| helicase [Thalassiosira pseudonana CCMP1335]
 gi|220973266|gb|EED91597.1| helicase, partial [Thalassiosira pseudonana CCMP1335]
          Length = 947

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/954 (48%), Positives = 632/954 (66%), Gaps = 75/954 (7%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AK Y F+LDPFQ+ ++  +E+NESVLV+AHTSAGKT VAEYAIA + RD QRV+YTSP+K
Sbjct: 1   AKVYPFQLDPFQQTAINYVEKNESVLVAAHTSAGKTVVAEYAIAKSLRDGQRVVYTSPIK 60

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYR+L +EF+DVGLMTGD+T++P+A+CLVMTTEILR MLYRGSEV++EVAWVI+D
Sbjct: 61  ALSNQKYRDLQEEFEDVGLMTGDITINPSATCLVMTTEILRSMLYRGSEVMREVAWVIYD 120

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HYM+D+ERGVVWEESII LP  ++ VFLSAT+ NA QF  WI  +H QPCHVVYT++R
Sbjct: 121 EVHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNAKQFVNWIAKIHHQPCHVVYTNYR 180

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           PTPLQHY+FP GG GL+LVVDEK +FRE NF K   T      GG   +G  +  M   G
Sbjct: 181 PTPLQHYIFPQGGDGLHLVVDEKGKFREANFQKAMSTLQ----GGGGTDGAIADAMMDSG 236

Query: 310 ---------------SGSG-GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD 353
                          +G G  SD+ +IVK++M R   PVIVFSFS+++CE++A+ + + D
Sbjct: 237 GGKGGRGQKRKRGGPAGKGPNSDLHRIVKLVMTRNLNPVIVFSFSKKDCEKYALELKRED 296

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
           +  + EKD + QV+ NA++ L+E+DR LP +E +LPLLKRGI +HH GLLP++KE+VE+L
Sbjct: 297 YTDEVEKDLITQVYSNAIESLSEDDRTLPQVEALLPLLKRGIGIHHGGLLPILKEIVEIL 356

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F EGL+KALFATETFA+G+NMPAKTVVFT  +K+DG   R++ SGEYIQMSGRAGRRGKD
Sbjct: 357 FSEGLIKALFATETFAIGINMPAKTVVFTNTRKFDGKEIRWVTSGEYIQMSGRAGRRGKD 416

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
           DRG+ I M+DE+ME    K ++ G P PL S++++SY  +LN+M R E     E++++ S
Sbjct: 417 DRGVVIQMMDEKMEPTVCKGILYGDPDPLNSSYKISYNMLLNMM-RVE-DVDPEYLLRAS 474

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLD--ASGEAE----VAEYHKLKLDIAQLEKKLMS 587
           FHQ+Q E   P +  K  + E+EA +++    G  +    V EY+ +   +   ++K+M 
Sbjct: 475 FHQYQQESEAPALEIKADEAEDEANAIEIVPGGSTDDLTAVGEYYGMDKQLLLTQRKMMK 534

Query: 588 EITRPERVLYYLGS-GRLIKVREGGTDWGWGVVVNVVKKP------SAGVGTLPSRGGGY 640
              RPE +L ++ S GRLI V   G  +GWGV+V   +K       SAG   L + G  +
Sbjct: 535 IQRRPEHILPFVQSGGRLIDVSIDGESYGWGVIVRYKRKAGTGTAGSAGQTALNAEGPLH 594

Query: 641 IVPVQLPL-------------------------------ISTLSKIRLSVPPDLRPLDAR 669
            + V LP                                I  +S +RL VP D +P +AR
Sbjct: 595 SIDVLLPCVDRTARHCRPESTKDPPNIVSMREFTVGLDTIDRISAVRLFVPQDTKPQEAR 654

Query: 670 QSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDEN 729
           ++I  +++E++ RFP GLP L+PVKD+KI   E   L+ +  EL+++L  H L+   DE 
Sbjct: 655 KNISNSLKEVQRRFPDGLPLLDPVKDLKINVSEFNKLLERASELKNRLATHKLSTDIDEE 714

Query: 730 Q----IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
           +    +  +++K ++  + + L+ + R  Q    +D+L+   RVLK+LGH+D  GV+Q K
Sbjct: 715 ERIKRVSAYEQKNDLMDQSRALRREARACQTMVMKDDLRKMKRVLKELGHVDGQGVIQTK 774

Query: 786 GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN----LRMELA 841
           GR AC I+T +EL+V ELMF G FNDL   Q  AL SC I  +KS +  +    L+  L+
Sbjct: 775 GRTACEINTANELVVVELMFAGLFNDLTVEQCVALLSCLIFDEKSKDDEDPAQGLKAYLS 834

Query: 842 KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            P  +L E AR +A++Q  C +EVN DE+V     P LM+ +Y W KGA F EV ++T  
Sbjct: 835 GPYYKLIELARTVAKVQISCNIEVNEDEFV-GKFNPGLMEAVYAWCKGAKFVEVQKLTGT 893

Query: 902 FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           FEGS IRS RRL+E + QL +A++++G + L+ KF   SE L+R I+F +SLYL
Sbjct: 894 FEGSTIRSLRRLEELVRQLASASKSIGNLELQAKFEKGSELLKRDIVFCSSLYL 947


>gi|255731826|ref|XP_002550837.1| ATP-dependent RNA helicase DOB1 [Candida tropicalis MYA-3404]
 gi|240131846|gb|EER31405.1| ATP-dependent RNA helicase DOB1 [Candida tropicalis MYA-3404]
          Length = 1056

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/999 (47%), Positives = 644/999 (64%), Gaps = 76/999 (7%)

Query: 11   KAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPV---YNG 67
            KA E  L    T + ++  K R+  R   H+VA+P  Y              P+      
Sbjct: 80   KASEGLLSKPSTSDADNKLKLRHQVR---HQVAIPPSYPYI-----------PIGEHKRK 125

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+TY F LDPFQ  +++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP
Sbjct: 126  EDARTYPFVLDPFQDTAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSP 185

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYREL   F DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVI
Sbjct: 186  IKALSNQKYRELQAIFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVI 245

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HYM+D+ RGVVWEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTD
Sbjct: 246  FDEVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD 305

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            FRPTPLQHY+FP GG G++LVVDEK  FRE+NF K   T     IG    +  AS   ++
Sbjct: 306  FRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMAT-----IGDNTGDDPASADKSR 360

Query: 308  ---------GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
                     GG+  G SDI+KIVKMI  +K+ PVIVFSFS+RECE  A+ MSKLDFNT E
Sbjct: 361  NGKKGKTFKGGNKDGKSDIYKIVKMIYMKKYNPVIVFSFSKRECESLALKMSKLDFNTDE 420

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            E++ + ++F NA++ L E DR LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG 
Sbjct: 421  EREALVKIFNNAIELLPENDRELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGF 480

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            +K LFATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI 
Sbjct: 481  LKVLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIV 540

Query: 479  IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            I+M+DE+ME    K MV G+   L S F L Y  I+NLM R EG  + E +++NSF QFQ
Sbjct: 541  IMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMIVNLM-RVEG-ISPEFMLENSFFQFQ 598

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
               ++P +  K+   ++E   +  + E  + EY++L+  + +    +   IT P   L +
Sbjct: 599  KAASVPVMEDKMLTYKKELEDIHINDEGIIKEYYELQQQLDKYNSDVQKVITHPGNSLPF 658

Query: 599  LGSGRLIKVREGGTDWGWGVV-----------------------------------VNVV 623
            L  GR+IKV+ G  D+GWG+V                                   VN++
Sbjct: 659  LQDGRVIKVKIGNQDYGWGMVTTFVKRNRKSQQEEFTPHEAYVVEVFITSMFIDSPVNLI 718

Query: 624  KK--PSAGVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
            KK  P    G  P++ G       + + L  I  +S +RL VP D +   A+++++  ++
Sbjct: 719  KKFNPLLPEGIRPAKSGEQTRAEFISITLDSIEKISTVRLRVPDDYKSSTAKRTLVKTLK 778

Query: 678  ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQR 736
            +L  + P G+P ++PV  MKI D +   L+N+I+ LE K+ A+PL N ++ ++    +  
Sbjct: 779  DLPKKLPDGIPLIDPVGSMKITDEDFKKLLNKIDILESKISANPLHNSARLKDLYEQYSY 838

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            K ++  +I+QLK K+  ++     ++L N  RVLKKL     + +V+LKGR A  I TGD
Sbjct: 839  KVKLETQIKQLKEKIFQAEAVVQLEQLGNMKRVLKKLELTGPNDIVELKGRVAAEISTGD 898

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            EL++TEL+F+G FNDL   Q+  L SCFI  +++ E   L+ ELA+P + + E+A KIA+
Sbjct: 899  ELMITELLFSGFFNDLTPQQICGLLSCFIFQERAKELPKLKPELAEPAKFIHETASKIAK 958

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            I   C LE+   +YVES     L++V++ WS  A+F+ + +MTDI+EGSIIR+ RR  E 
Sbjct: 959  ISKNCNLEIVEKDYVES-FNLALVEVVFAWSNNASFSSICKMTDIYEGSIIRALRREIEL 1017

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L QL  AA+ +G   L  KF   +E L R  +  +SLY+
Sbjct: 1018 LKQLVDAAKIIGNQELVDKFDKCTELLNRDFVQVSSLYM 1056


>gi|58266562|ref|XP_570437.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|134110500|ref|XP_776077.1| hypothetical protein CNBD1250 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50258745|gb|EAL21430.1| hypothetical protein CNBD1250 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|57226670|gb|AAW43130.1| conserved hypothetical protein [Cryptococcus neoformans var.
            neoformans JEC21]
          Length = 1068

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/989 (47%), Positives = 637/989 (64%), Gaps = 62/989 (6%)

Query: 15   EDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYS 74
            +D      P +E+  K   L     H+VA+P  Y        H     P      A+TY 
Sbjct: 94   KDFADVTAPGQEAKLK---LVHQVRHQVAIPPDYPYIPINQ-HKRKDPP------ARTYK 143

Query: 75   FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
            FELDPFQ VS +C+ERNESVLVSAHTSAGKT VAE+AIA   ++ +RV+YTSP+KALSNQ
Sbjct: 144  FELDPFQFVSTSCIERNESVLVSAHTSAGKTVVAEFAIATCLKEGRRVVYTSPIKALSNQ 203

Query: 135  KYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM 194
            K+RE  + F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM
Sbjct: 204  KFREFTETFGDVGLMTGDVTINPEASCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYM 263

Query: 195  KDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQ 254
            +D+ERGVVWEE+II LP  ++ VFLSAT+ N+ +FAEWIC  H+QPCHVVYTDFRPTPLQ
Sbjct: 264  RDKERGVVWEETIILLPHTVRYVFLSATIPNSMEFAEWICATHEQPCHVVYTDFRPTPLQ 323

Query: 255  HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG- 313
            HY+FP G  G+YLVVDEK  FR+DNF K     L Q  G    N              G 
Sbjct: 324  HYLFPAGSEGIYLVVDEKSNFRDDNFQKAMAA-LAQGQGEDPANPSGGKGKKGKTKKGGA 382

Query: 314  ----GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                 SDI+KIV++IM R   PVI+F+FS+RECE  AM M K DFNT +E  TV QVF++
Sbjct: 383  LKGETSDIYKIVQLIMRRNLNPVIIFAFSKRECEDLAMQMQKFDFNTPDEAATVAQVFES 442

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            A+  L+E+D+ L  IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+KALFATETF+
Sbjct: 443  AIGSLSEDDKKLSQIEGILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKALFATETFS 502

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
            +GLNMPAKTVVFT+V+K+DG   R +  GEYIQMSGRAGRRG D RGI I+M DE++E  
Sbjct: 503  IGLNMPAKTVVFTSVRKFDGKDFRNLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPE 562

Query: 490  TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
              K MV G+   L S F L Y  I+NLM R EG  + E++++  F QFQ   ++P + K+
Sbjct: 563  AAKGMVKGQADRLDSAFHLGYNMIINLM-RVEG-VSPEYMLEKCFFQFQNSMSVPVLEKQ 620

Query: 550  VSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
            + + E E  ++    E E+ EY++L+  + +  +   + IT P   L +L +GRL+++R+
Sbjct: 621  LKEAEAERDAIVIEREDEIEEYYELRQQLKERGQDFQAVITHPAYCLRFLQAGRLVEIRD 680

Query: 610  GGTDWGWGVVV-------------------------------------NVVKKPSAGVGT 632
            G  D+GWGVVV                                     ++ +  SA   +
Sbjct: 681  GDKDFGWGVVVAFNKVVNQRGRPPIWTDQDPPQKQYIVDVLTRVETGASIPRDRSASEIS 740

Query: 633  LPS---RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
             PS   +G   I+   L  + ++S+ R+++P DLR    + +   AV E++ R P G P 
Sbjct: 741  PPSGADKGEVAIIACSLSTVQSISQYRVNLPKDLRGQQEKNTAFRAVNEIKKRMPDGPPL 800

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLK 748
            L+P+K M I D   VDLV +I  LE++L    + KS +  ++   + RK +    ++ LK
Sbjct: 801  LDPIKSMGISDKSFVDLVKKIALLENRLQTLEITKSPELPRLYDLYDRKQKSIQSVKSLK 860

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
             ++         +ELK+R RVL++LG   AD VV++KGR AC I TGDEL++TE+MF GT
Sbjct: 861  RRINSVHDILQLEELKSRKRVLRRLGFTTADDVVEMKGRVACEISTGDELMLTEMMFGGT 920

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            F  L   Q AAL SCF+  +KS  ++ L+ ELA PL+ LQE+A++IA++ NE  + +  D
Sbjct: 921  FGTLAPEQCAALLSCFVFQEKSEAKVRLKEELAVPLRTLQETAKRIAKVSNESGIAIVED 980

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            EYV+S  +  +MDV+  W KGA F+++ +MTD+FEGSIIR  RRL E + Q+  AA A+G
Sbjct: 981  EYVQS-FKVEMMDVVLQWCKGAKFSQICEMTDVFEGSIIRCFRRLQELIRQMGQAAHAIG 1039

Query: 929  EVNLEKKFAAASESLRR--GIMFSNSLYL 955
               LE+KFA + E L R   ++F+ SLYL
Sbjct: 1040 NTELEEKFAKSMELLERPNTVVFNPSLYL 1068


>gi|365759958|gb|EHN01710.1| Mtr4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1058

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/968 (48%), Positives = 652/968 (67%), Gaps = 67/968 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEM---AKTYSFELDPFQRVSVACLERNESVLV 96
            H+VA+P  Y  T           P+   +    A+TY F LDPFQ  +++C++R ESVLV
Sbjct: 106  HQVALPPNYDYT-----------PIAEHKRVNEARTYPFTLDPFQDTAISCIDRGESVLV 154

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA + ++KQRVIYTSP+KALSNQKYREL  EF DVGLMTGD+T++
Sbjct: 155  SAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDITIN 214

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+A CLVMTTEILR MLYRGSEV++EVAWV+FDE+HYM+D+ERGVVWEE+II LP  ++ 
Sbjct: 215  PDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDKERGVVWEETIILLPDKVRY 274

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVDEK  FR
Sbjct: 275  VFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVDEKSTFR 334

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGR---MAKGGSGSGGS--DIFKIVKMIMERKFQP 331
            E+NF K   +   Q +G    + ++ G+     KGGS  G +  DI+KIVKMI ++K+ P
Sbjct: 335  EENFQKAMASISNQ-VGDDPNSTESRGKKNQTYKGGSAKGDAKGDIYKIVKMIWKKKYNP 393

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VIVFSFS+R+CE+ A+ MSKLDFN+ +EKD + ++F NA+  L E DR LP I+ +LPLL
Sbjct: 394  VIVFSFSKRDCEELALKMSKLDFNSDDEKDALTKIFNNAIALLPETDRELPQIKHILPLL 453

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+KWDG  
Sbjct: 454  RRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQ 513

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F L Y 
Sbjct: 514  FRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFHLGYN 573

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             ILNLM R EG  + E ++++SF QFQ   ++P + KK+++LE+E+  ++   E  V EY
Sbjct: 574  MILNLM-RVEG-ISPEFMLEHSFFQFQSVISVPVMEKKLAELEKESNDIEVEDEENVKEY 631

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNVVKK----- 625
            ++++  I    + +   IT P   L +L  GRL+++   G D +GWG VV+  K+     
Sbjct: 632  YEIEQSIKSYREDVRQIITHPANALSFLQPGRLVEISVHGKDNYGWGAVVDFAKRINKRN 691

Query: 626  ---------------------------------PSAGVGTLPSRGG----GYIVPVQLPL 648
                                             P+   G  P+  G      ++P+ L  
Sbjct: 692  PTAVYTDHESYIVNVMVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICAVIPITLDS 751

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            I  +  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED + + L+ 
Sbjct: 752  IKAIGNLRLYMPKDIRASGQKETVGKSLKEVNRRFPDGIPMLDPVKNMKIEDEDFLKLIK 811

Query: 709  QIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            +I+ L  KL ++PL  S   +++   + RK ++  +++QLK K+ +SQ     D+L+ R 
Sbjct: 812  KIDVLGTKLSSNPLTNSMRLDELYGKYSRKHDLQKDMKQLKHKISESQAVIQLDDLRRRK 871

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AAL SCF   
Sbjct: 872  RVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAALLSCFAFQ 931

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
            ++  E   L+ ELA+PL+ ++E A KIA+I  + K+E+   +YVES  R  LM+V+Y W 
Sbjct: 932  ERCKEAPRLKPELAEPLKAMREIAAKIAKIAKDSKIELVEKDYVES-FRHELMEVVYEWC 990

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            KGATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A  + + R I
Sbjct: 991  KGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAVLKLIHRDI 1050

Query: 948  MFSNSLYL 955
            + + SLYL
Sbjct: 1051 VSAGSLYL 1058


>gi|340376971|ref|XP_003387004.1| PREDICTED: superkiller viralicidic activity 2-like 2-like [Amphimedon
            queenslandica]
          Length = 1011

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/951 (48%), Positives = 631/951 (66%), Gaps = 67/951 (7%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEV+VP+ Y   K E++      P      AK Y F+LD FQR ++ C+E N+SVLV
Sbjct: 96   TCTHEVSVPANY---KFESLKPLNEKP------AKEYPFKLDSFQRKAIQCIENNQSVLV 146

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VAEYAIA++ RD+QRVIYT+PLKALSNQKYRE+++EFKDVGLMTGD T++
Sbjct: 147  SAHTSAGKTVVAEYAIAVSLRDRQRVIYTTPLKALSNQKYREMYEEFKDVGLMTGDTTIN 206

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P ASC+VMTTEILR MLYRGSEV++EV WV+FDEIHYM+D+   +V    ++ +      
Sbjct: 207  PTASCIVMTTEILRSMLYRGSEVMREVGWVVFDEIHYMRDKVL-LVHMSVLVIISILCVT 265

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VF   T+S+              PCHVVYT+ RP PLQHY++P G  GLYLVVDE  +FR
Sbjct: 266  VFKMMTLSS--------------PCHVVYTEQRPVPLQHYLYPAGADGLYLVVDENGKFR 311

Query: 277  EDNFVKLQDTFLKQKIGGRRENG--KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            EDNF        +  +   +E+G     G         G S+ +K+VKMIMER  QPVI+
Sbjct: 312  EDNF--------QTAMSCLQESGIGNKKGTKGNKKGTKGPSNCYKVVKMIMERSLQPVII 363

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFSRRECE  A+ MSKLDFNT  EK+ V++VF NA+DCL+++D+ LP +  +LPLLKRG
Sbjct: 364  FSFSRRECEALALQMSKLDFNTAREKELVDEVFTNAIDCLSDDDKQLPQVVHLLPLLKRG 423

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I +HHSGLLP++KE +E+LF EGL+KALFATETFA+GLNMPA+TVVFT  +K+DG   R+
Sbjct: 424  IGIHHSGLLPILKETIEILFSEGLIKALFATETFALGLNMPARTVVFTNARKFDGKDFRW 483

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            I SGEYIQMSGRAGRRG D+RGI ++M+DEQM+    K ++ G+P PL S F L+Y  +L
Sbjct: 484  ITSGEYIQMSGRAGRRGLDERGIVMLMIDEQMDSTIGKTLLKGQPDPLNSAFHLTYNMVL 543

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NL+ R E +   E++++ SF+QFQ    +PD+ +KV  LE++  +L    E  V  Y+K+
Sbjct: 544  NLL-RVE-EINPEYMLERSFYQFQNNSTIPDLEEKVKVLEKKRDALVIEDEDNVTSYYKM 601

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV---- 630
            +  I++L  ++   IT+P   + ++  GRL+ V   G D+GWG V+N  KK S  V    
Sbjct: 602  RDHISKLSMQMQRFITKPTYCIPFMQPGRLVNVIVDGADFGWGAVINFQKKTSQTVIIHT 661

Query: 631  GT------------------LPSRGGGY-------IVPVQLPLISTLSKIRLSVPPDLRP 665
            GT                  +P    G+       I+P  L  +  LS +R+ +P DLRP
Sbjct: 662  GTTQTIYIVEVLLRCSTDSAVPKPATGHNNREEMRIIPSSLNSLHKLSSVRVYLPKDLRP 721

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
             D+R  +  ++ E+  RFP GLP L+PV DM I+D E   +V +IE LE +L     +K+
Sbjct: 722  SDSRFMVGKSIDEVIKRFPDGLPLLDPVADMNIKDEEFKKIVKKIEALEKRLVTSVAHKN 781

Query: 726  QDENQIRCF-QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +  Q+    QRK E++  +++ K +++ +Q     DELK R RVL++LG+ ++  V++L
Sbjct: 782  PNLEQLNSLCQRKIELSSAVRESKRELKKAQTIMQMDELKCRKRVLRRLGYANSSDVIEL 841

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC ID G+ELL+TE++FNG FNDL   Q  AL SCF+  +K+ E   L  EL+ PL
Sbjct: 842  KGRVACEIDCGEELLLTEMIFNGAFNDLSVEQCVALLSCFVFQEKTDEMPKLTEELSGPL 901

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            + +Q+SARKIA++  E KL+++ D YVES  RP LMDV++ WS GA F+++ +MTD+FEG
Sbjct: 902  RLMQDSARKIAKVAKEAKLDIDEDTYVES-FRPHLMDVLHAWSTGAAFSQICKMTDVFEG 960

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            SIIR  RRL+E L Q+  AA+ +G   LE KFA     ++R I+F+ SLYL
Sbjct: 961  SIIRCIRRLEEILRQMCQAAKTIGNTELENKFAQGIMRIKRDIVFAASLYL 1011


>gi|410730847|ref|XP_003980244.1| hypothetical protein NDAI_0G05850 [Naumovozyma dairenensis CBS 421]
 gi|401780421|emb|CCK73568.1| hypothetical protein NDAI_0G05850 [Naumovozyma dairenensis CBS 421]
          Length = 1087

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/977 (48%), Positives = 643/977 (65%), Gaps = 68/977 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y  T   A H            A+TY F LDPFQ  +V+C++R ES
Sbjct: 124  LSHQVRHQVALPPNYDYTPI-AEHKRINE-------ARTYPFTLDPFQDTAVSCIDRGES 175

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYREL  EF DVGLMTGD+
Sbjct: 176  VLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDI 235

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II LP  
Sbjct: 236  TINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETIILLPDK 295

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLVVDEK 
Sbjct: 296  VRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLVVDEKS 355

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSGSGGS--DIFKIVKMIMER 327
             FRE+NF K   +   Q   G   N   S    G+  KGG+  G +  DI+KIVKMI ++
Sbjct: 356  TFREENFQKAMASISNQ--SGDDPNSTNSRGKKGQTFKGGAAKGDAKGDIYKIVKMIWKK 413

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
            K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD + ++F NA+  L E DR LP I+ +
Sbjct: 414  KYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDALSKIFNNAIALLPETDRELPQIKHI 473

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+V+KW
Sbjct: 474  LPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTSVRKW 533

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L S F 
Sbjct: 534  DGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLDSAFH 593

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E ++++SF+QFQ   ++P + KK+ +L +E   +    E  
Sbjct: 594  LGYNMILNLM-RVEG-ISPEFMLEHSFYQFQNVISVPIMEKKLIELNKEIDDIQIDDEEN 651

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT------DWGWGVVVN 621
            + EY++++  +    + +   +T P  VL +L  GRLI+V  GG       ++GW  V++
Sbjct: 652  IKEYYEVRQTLDSYNEDVRHIMTHPANVLSFLQPGRLIEVNIGGKTGDNKQNYGWAAVID 711

Query: 622  VVKK--------------------------------------PSAGVGTLPSRGG----G 639
              K+                                      P+   G  P+  G     
Sbjct: 712  FAKRINKRNPTAVYTDHESYIVNVVVNSMYADSPVNLLKPFNPTFPEGIRPAEEGEKSIC 771

Query: 640  YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE 699
              +P+ L  I +L  IRL +P D+R    ++ +  ++ E++ RFP G+P ++P+K+MKIE
Sbjct: 772  AAIPITLDSIQSLGNIRLHMPKDIRASGQKEIVGKSLSEVQRRFPDGIPLIDPIKNMKIE 831

Query: 700  DPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQK 758
            D +   L+ +IE LE KLF++ L+ S    ++   + RK  + ++ +QLK K+ +SQ   
Sbjct: 832  DDDFTKLLKKIEVLEGKLFSNQLSNSVRLAELYEKYSRKHALINDTKQLKHKINESQAVI 891

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              D+L+ R RVL++LG      +++LKGR AC I +GDELL+TEL+FNG FN+L   Q A
Sbjct: 892  QLDDLRRRKRVLRRLGFSTPSDIIELKGRVACEISSGDELLLTELIFNGNFNELTPEQSA 951

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
            AL SCF   ++  E   L+ EL +PL+ ++E A KIA+I  + K+E+   +YVES  R  
Sbjct: 952  ALLSCFAFQERCKEAPRLKPELGEPLKAMRELASKIAKIMKDSKIEIVEKDYVES-FRHE 1010

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            LM+V+Y W KGATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G   L++K   
Sbjct: 1011 LMEVVYEWCKGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNTALKEKMET 1070

Query: 939  ASESLRRGIMFSNSLYL 955
              + + R I+ + SLYL
Sbjct: 1071 VIKLIHRDIVSAGSLYL 1087


>gi|428173804|gb|EKX42704.1| hypothetical protein GUITHDRAFT_111376 [Guillardia theta CCMP2712]
          Length = 1039

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/983 (47%), Positives = 636/983 (64%), Gaps = 80/983 (8%)

Query: 22   TPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQ 81
            TPE + + +     ++C H +A+P    L +          PV     AK Y F+LDPFQ
Sbjct: 88   TPEGQESGR-----KACRHHIAIPPTMTLEE-------VQRPVPPKPPAKEYKFQLDPFQ 135

Query: 82   RVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQ 141
              +V  LE+ +SVLVSAHTSAGKTAVAEYAIAMA RDKQRV+YTSP+KALSNQK+REL  
Sbjct: 136  AAAVKSLEKGQSVLVSAHTSAGKTAVAEYAIAMALRDKQRVVYTSPIKALSNQKFRELTD 195

Query: 142  EFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGV 201
            EF+DVGLMTGD+T++P AS LVMTTEILR MLY+GSE+++E+ W+I+DEIHYM+DRERGV
Sbjct: 196  EFQDVGLMTGDITINPEASLLVMTTEILRSMLYKGSELIRELVWIIYDEIHYMRDRERGV 255

Query: 202  VWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVG 261
            VWEESI+ +P  I+ VFLSAT+ NA  FA W+  +H QPC+V+YTD+RPTPLQHY+FP G
Sbjct: 256  VWEESIVLVPSKIRFVFLSATIPNAPDFACWVSRVHSQPCNVIYTDYRPTPLQHYMFPAG 315

Query: 262  GSGLYLVVDEKEQFREDNF----VKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDI 317
            G GLYLVVDE   FRE+NF     +L  +    +I  R++ G  +          GGSDI
Sbjct: 316  GEGLYLVVDEDGNFREENFHKALARLDTSAANTEIAARKKGGPGTKGKI---KERGGSDI 372

Query: 318  FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
            +KI+KMIME+ + PVIVF FS+++CE  A+ MSKLDFN  +EK  ++ +F +AVD L+ +
Sbjct: 373  YKIIKMIMEKNYDPVIVFCFSKKDCEALALQMSKLDFNNDDEKANIDMIFNSAVDSLSAD 432

Query: 378  DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
            DR +PA+E +LPLLKRGI +HHSGLLP++KE++E+LFQEGL+K L ATETF+MGLNMPAK
Sbjct: 433  DRKIPAVEGILPLLKRGIGIHHSGLLPILKEVIEILFQEGLIKCLCATETFSMGLNMPAK 492

Query: 438  TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLG 497
            T VFT V+KWDGDS R++  GEYIQMSGRAGRRG DDRGI I+MVDE+ME +  K MV G
Sbjct: 493  TCVFTGVRKWDGDSFRWVSGGEYIQMSGRAGRRGLDDRGIVILMVDEKMEPDVAKGMVKG 552

Query: 498  KPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEA 557
            +  PL S+FRL Y  +LNL+ R EG    E++IK SF+QFQ +K  PD+  ++  LE E 
Sbjct: 553  QSDPLNSSFRLGYNMLLNLL-RFEGA-DPEYLIKRSFYQFQMDKQAPDLQGQIEDLEVER 610

Query: 558  ASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT---DW 614
              L    E  VAEYH+L     ++E+++ S +  P+  + +L  GR ++     T    W
Sbjct: 611  RQLVVHDEGLVAEYHELVTQRGKVEEEMRSYVLSPKVAVNFLNPGRFVECFADETHAQTW 670

Query: 615  GWGVVVNVVK------KPSAGVGTL------------------------------PSRGG 638
            GWGV+V+  K      K S G   L                              P R G
Sbjct: 671  GWGVLVSFKKAEKEKDKGSPGASYLLDLLLPCSTRKTIILPTGKEMPVGDNDSFHPPREG 730

Query: 639  GY--IVPVQLPL--ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
                I  VQLPL  + +LS IR+ VP DLR  + R+S+   +  ++ RFP G+P L+PV+
Sbjct: 731  EKHEIQVVQLPLSMVKSLSSIRVYVPQDLRSAENRRSVGKTMSVVQERFPDGIPLLDPVE 790

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE--NQIRCFQRKAEVNHEIQQLKSKMR 752
            DM+I++ E   LV + E LE K+  H +NKS  +       +++K  +   I  L+  M+
Sbjct: 791  DMQIKEEEFQRLVRKSESLETKVKQHKVNKSSSKYAKAYESYKKKLAIASSIAVLQKSMK 850

Query: 753  DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
             +    FR ELK   RVL++L + D + VVQ+KGRAA  ID GDEL++TEL+F G FNDL
Sbjct: 851  GASGMVFRSELKGMKRVLRRLKYTDGEDVVQIKGRAAAEIDCGDELVLTELIFEGVFNDL 910

Query: 813  DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
                 AA+ SCF+  +K+ E + L  EL +P             I +E KL+V+V+EYV+
Sbjct: 911  APEVCAAVLSCFVFDEKTDENLRLPDELKRP-------------IDSESKLQVDVEEYVK 957

Query: 873  STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
               +  L ++   W +G  F +++  ++IFEGS+IR  RRL+E + QL    + +G   L
Sbjct: 958  K-FKAGLAEMTLRWCQGVKFVDLMAKSEIFEGSVIRCIRRLEELVTQLAGVCKVIGNTEL 1016

Query: 933  EKKFAAASESLRRGIMFSNSLYL 955
            EKKF  AS+ ++R I+F+ SLYL
Sbjct: 1017 EKKFKEASKMMKRDIVFAASLYL 1039


>gi|212528460|ref|XP_002144387.1| ATP dependent RNA helicase (Dob1), putative [Talaromyces marneffei
            ATCC 18224]
 gi|210073785|gb|EEA27872.1| ATP dependent RNA helicase (Dob1), putative [Talaromyces marneffei
            ATCC 18224]
          Length = 1077

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/969 (47%), Positives = 636/969 (65%), Gaps = 59/969 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        +   +  V   E A+ + F LDPFQ+ +V  ++R ES
Sbjct: 121  LSHQVRHQVAIPPNYP-------YIPISQHVPPEEPARVWPFTLDPFQQTAVHSIQREES 173

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + +  QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 174  VLVSAHTSAGKTVVAEYAIAQSLKKNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 233

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D  RGVVWEE+II LP  
Sbjct: 234  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDATRGVVWEETIILLPDK 293

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI +LH QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 294  VRYVFLSATIPNAMQFAEWIVNLHHQPCHVVYTDFRPTPLQHYFFPAGAEGIHLVVDEKG 353

Query: 274  QFREDNFVKLQDTFLKQK-------IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIME 326
             FREDNF K   T  + K       +  R+  GK   +    G+  G SDIFKIV+MIM 
Sbjct: 354  VFREDNFQKAMSTIAENKGDDPANALANRK--GKGKDKKFNKGANKGPSDIFKIVRMIML 411

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            R + PVIVFSFS+RECE +A+ MSK+ FN   EK+ V +VF +A++ L+EEDR L  I+ 
Sbjct: 412  RSYNPVIVFSFSKRECEANALQMSKMAFNDDSEKEMVSKVFNSAIEMLSEEDRQLKQIQN 471

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI +HH GLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 472  LLPLLRRGIGIHHGGLLPILKETIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTSVRK 531

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG   R++   E+IQMSGRAGRRG D+RGI I+MV E+ME +  K++V G+   L S F
Sbjct: 532  FDGIDTRWVTPSEFIQMSGRAGRRGLDERGIVIMMVGEEMEPSVAKEIVRGEQDRLNSAF 591

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNL+ R +G  + E +++  F+QFQ   ++  + K++++LE +  ++    E 
Sbjct: 592  HLGYNMILNLI-RVDG-ISPEFMLRKCFYQFQNTSSVAGLEKELAELETKRINMSIPDEP 649

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN----- 621
             + +Y+ L+  + +    +   IT P+  L +L  GRL+ +   G D GWG +VN     
Sbjct: 650  TIQDYYDLRKQLTRFTADMQEVITHPDYCLQFLQPGRLVHIMHQGNDLGWGAIVNYKQRR 709

Query: 622  ---------------------VVKKPSAGV--------GTLPSRGGG----YIVPVQLPL 648
                                 V +  S G         G  P + G      +VPV L  
Sbjct: 710  SKNPNEVLAPQESYIVDVLLQVAEGSSTGTRTHTDLPAGIRPPKEGEKSHMQVVPVLLKC 769

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            + ++S +R+ +P +++ +D+R S+  +V E++ RFP GLP L+P+++M I D     L+ 
Sbjct: 770  LQSISHVRIFLPKEVQTVDSRASVKRSVDEIKKRFPDGLPLLDPIENMNITDDSFKKLMR 829

Query: 709  QIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            ++E LE +L A+PL+ S    ++   +  K E+  +I+ +K K+ D+      DELK R 
Sbjct: 830  KVEVLESRLLANPLHNSPRLPELYDQYSEKVELGVQIKDIKKKISDAMSVIQMDELKCRK 889

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            RVL++L  I+ + VVQLK R AC I TGDEL+++EL+FNG FN+L   Q+AA+ SCF+  
Sbjct: 890  RVLRRLDFINKEDVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQIAAVLSCFVFE 949

Query: 828  DKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
            +K  +   L R EL+KPL+++Q  AR IA++  E KL VN +EYV+S     LMDVIY W
Sbjct: 950  EKVKDAPALTRDELSKPLKEIQSQARIIAKMSMESKLAVNEEEYVQS-FHWELMDVIYEW 1008

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            + G +FA++  MTD++EGS+IR  RRL+E + Q+  AA+ +G   LE+KF  +   +RR 
Sbjct: 1009 AHGMSFAKICTMTDVYEGSLIRVFRRLEELMRQMAQAAKVMGNDELEQKFETSLTKVRRD 1068

Query: 947  IMFSNSLYL 955
            I+ + SLYL
Sbjct: 1069 IVAAQSLYL 1077


>gi|388578815|gb|EIM19150.1| antiviral helicase [Wallemia sebi CBS 633.66]
          Length = 1067

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/988 (47%), Positives = 633/988 (64%), Gaps = 63/988 (6%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            + GT EE     Q +L     H VA+P  Y        +   +  V   E A++Y F LD
Sbjct: 92   LAGTTEEGDAAGQISLQHQVRHRVALPPNYP-------YVPISQHVPAKEPARSYPFTLD 144

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQRVSV  +ER+ESVLVSAHTSAGKT VAEYAIA   +  +RV+YTSP+KALSNQKYRE
Sbjct: 145  PFQRVSVNSIERDESVLVSAHTSAGKTVVAEYAIAQCLKRGERVVYTSPIKALSNQKYRE 204

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  +F DVGLMTGDVT++P+ASCLVMTTEILR MLYRGSE+++EV+WVIFDEIHYM+D+E
Sbjct: 205  MLADFGDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEIMREVSWVIFDEIHYMRDKE 264

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  ++ VFLSAT+ NA +FA W+CH H QP HVVYT++RPTPLQHY+F
Sbjct: 265  RGVVWEETIILLPHKVRYVFLSATIPNAHEFAAWVCHTHNQPVHVVYTNYRPTPLQHYLF 324

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA----SGRMAKGGSGSGG 314
            P GG G++LVVDEK QFRE+NFVK     +    GG      A    S +  K G     
Sbjct: 325  PAGGEGIHLVVDEKGQFREENFVKAMGALMDA--GGEAPADAAKGKSSKKGTKKGGNKDQ 382

Query: 315  SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            SDI+KIVKMIM R + PVIVF+FS+RECE  A+ MSKL+FN+ +E+D V +VF NA+  L
Sbjct: 383  SDIYKIVKMIMMRNYNPVIVFAFSKRECENLALQMSKLEFNSDQERDMVSKVFTNAIANL 442

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
            N+ED+NLP I+ +LPLL+RGI +HH GLLP++KE +E+LFQEGL+K LFATETF++GLNM
Sbjct: 443  NDEDKNLPQIQQILPLLRRGIGIHHGGLLPILKETIEILFQEGLLKVLFATETFSIGLNM 502

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
            PAKTVVFT V+K+DG   R +  GEYIQMSGRAGRRG DDRGI I+M DE++E    K M
Sbjct: 503  PAKTVVFTNVRKFDGKDFRTLTGGEYIQMSGRAGRRGLDDRGIVIMMCDEKLEPTNAKGM 562

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            V G+   L S F L Y  ILNLM R EG  + E+++   F+Q Q  +++P + K++ + E
Sbjct: 563  VKGEADRLDSAFHLGYNMILNLM-RVEG-ISPEYMLNRCFYQHQQTQSVPQLEKELKEWE 620

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
             E  ++    E  + EY+ LK  +      +      P+  L +L  GRL+KVR    ++
Sbjct: 621  AERNNIVVPEETAITEYYNLKKQLEDFSSDIRQAQNLPQYALPFLQPGRLVKVRHQDLNF 680

Query: 615  GWGVVVNVVKKPSAGVGTLPS--------------------------------------- 635
            GWGVVVN  K+       LP+                                       
Sbjct: 681  GWGVVVNYNKRVGPAKKPLPADTKPQETYIVDVLLNCASGSSVPKDRNSNNSDQSLTFKP 740

Query: 636  -----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
                 +G   +VPV L  +  +S IRL +P DLRP  A++    +V+E++ RFP+G+  L
Sbjct: 741  CPTGEKGEAMVVPVLLSTLDGISHIRLFLPKDLRPAQAKEQAYKSVREVQKRFPKGVAML 800

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKS 749
            +PV++M I+D     L+N++  LE K+  + L   +  ++I + +  K  + +++++ K 
Sbjct: 801  DPVENMNIKDEGFKKLINRVAILETKIKENKLTSDERLDEIYQAYLNKLNIINKVKETKK 860

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            K++ +Q     DELK R RVL++LG      V+++KGR AC I TGDELL+TE++FNG F
Sbjct: 861  KIQTTQDVIQLDELKCRKRVLRRLGFTSQSDVIEMKGRVACEISTGDELLLTEMIFNGVF 920

Query: 810  NDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 869
            N L   Q AAL SCF+  +KS     L  EL  PL  LQE AR+IA++  E KL  + + 
Sbjct: 921  NQLTSEQCAALLSCFVFDEKSEANQTLDNELKAPLHVLQEGARRIAKVSLESKLTFDEEV 980

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            YV S  +  LM+V+  W KG TFA +  +TD+FEGSIIR+ RRL E L Q+ +AA A+G 
Sbjct: 981  YVRS-FKVELMNVVMEWCKGKTFAHLCTLTDVFEGSIIRAFRRLQELLRQMASAANAIGN 1039

Query: 930  VNLEKKFAAASESLRR--GIMFSNSLYL 955
             +L++KF  A E + R   ++   SLYL
Sbjct: 1040 NDLKEKFEKALELVDRPNSVVSCQSLYL 1067


>gi|121706716|ref|XP_001271607.1| ATP dependent RNA helicase (Dob1), putative [Aspergillus clavatus
            NRRL 1]
 gi|119399755|gb|EAW10181.1| ATP dependent RNA helicase (Dob1), putative [Aspergillus clavatus
            NRRL 1]
          Length = 1082

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/970 (48%), Positives = 635/970 (65%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+V+VA +ER ES
Sbjct: 125  LSHQVRHQVAIPPNYPYVPISQ-HKAPENP------ARVWPFTLDPFQQVAVASIEREES 177

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 178  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 237

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D  RGVVWEE+II LP  
Sbjct: 238  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDAIRGVVWEETIILLPDK 297

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP GG G++LVVDEK 
Sbjct: 298  VRYVFLSATIPNAMQFAEWIVKMHNQPCHVVYTDFRPTPLQHYFFPAGGEGIHLVVDEKG 357

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   +   +K G    +  A         ++ KGG+  G +DI+KIVKMIM 
Sbjct: 358  VFREENFQKAMSSIADKK-GDDPADAMAKRKGRGKDKKLNKGGN-EGPTDIYKIVKMIML 415

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A++MS L FN   EK+ V +VF +A++ L+EEDRNLP I+ 
Sbjct: 416  KNLNPVIVFSFSKRECEACALNMSALAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQN 475

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 476  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 535

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E++QMSGRAGRRG D+RGI I+MV E+M+    K++V G+   L S F
Sbjct: 536  FDGFSQRWVTPSEFVQMSGRAGRRGLDERGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF 595

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ      ++ K++  LEE+ A++  S E 
Sbjct: 596  HLGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGAAELEKELKALEEKKANMTISDEG 653

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN----- 621
             + EY+ L++ + +    + + I+ P+  L ++  GRL+ V+    D+GWGVVVN     
Sbjct: 654  TIREYYDLRVQLDKYADDIQAVISHPDHCLTFMTPGRLVHVKHKDKDFGWGVVVNYKQRR 713

Query: 622  ----------------------VVKKPSAGVGTL--------PSRGGGY----IVPVQLP 647
                                  + + PS    T         P++ G      +VP+   
Sbjct: 714  PAKNSHEEIPREQQYIVDVLMKIAEGPSVATKTFEELPSGVRPAKEGENSRMEVVPIVTG 773

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I  +S +RL VP +L   ++R  +   V E+  RFP G+  L+P++DMKI+  E    +
Sbjct: 774  CIRAISHVRLRVPKELNSKESRNGVKKLVDEVMRRFPDGIALLDPLEDMKIQGEEFKKTL 833

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             ++E LE +L A+PL+ S    ++ + +  K E+  +I++ KSK+ D+      DELK R
Sbjct: 834  RKVEVLESRLLANPLHNSPRLPELYQQYAEKEELGAKIKETKSKISDAMSIMQLDELKCR 893

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN L   Q AA  S F+ 
Sbjct: 894  KRVLRRFGFINEADVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQAAAALSVFVF 953

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +K+ E   L R ELAKPL+++Q  AR +A++  E KL VN +EYV+S     LM+VIY 
Sbjct: 954  EEKTKETPALTREELAKPLKEIQAQARIVAKVSQESKLAVNEEEYVQS-FHWELMEVIYE 1012

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++  MTD++EGS+IR  RRL+E L Q+  A++ +G   LE KF  A   +RR
Sbjct: 1013 WANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQASKVMGNEELESKFEEALTKVRR 1072

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1073 DIVAAQSLYL 1082


>gi|398389134|ref|XP_003848028.1| hypothetical protein MYCGRDRAFT_111559 [Zymoseptoria tritici IPO323]
 gi|339467902|gb|EGP83004.1| hypothetical protein MYCGRDRAFT_111559 [Zymoseptoria tritici IPO323]
          Length = 1083

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/937 (48%), Positives = 624/937 (66%), Gaps = 55/937 (5%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ F LDPFQ VS++ +ERNESVLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+K
Sbjct: 140  ARTWPFTLDPFQEVSISSIERNESVLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIK 199

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYRE   EF DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+FD
Sbjct: 200  ALSNQKYREFQAEFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFD 259

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFR
Sbjct: 260  EVHYMRDKTRGVVWEETIILLPDKVRYVFLSATIPNAMQFAEWIVKTHNQPCHVVYTDFR 319

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
            PTPLQHY FP G  G++L+VDEK  FREDNF K     +  K G    +  A  +     
Sbjct: 320  PTPLQHYFFPAGADGIHLIVDEKGTFREDNFNKAM-AAIADKAGDDGTDPMAKRKGKGKD 378

Query: 310  S-------GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
                      G +DI+KIVKMIM + + PVIVFSFS+R+CE +A+ MS+L FN + EK  
Sbjct: 379  KKINKGGRKDGPTDIYKIVKMIMMKNYNPVIVFSFSKRDCENYALQMSQLAFNDESEKAM 438

Query: 363  VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            V +VF +A++ L++ED+ LP I+ +LPLL+RGI +HHSGLLP++KE +E+LFQEGL+K L
Sbjct: 439  VSKVFSSAIEMLSDEDKELPQIQHLLPLLRRGIGIHHSGLLPILKETIEILFQEGLIKVL 498

Query: 423  FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
            FATETF++GLNMPAKTVVFT+V+K+DG S RY+   E+IQMSGRAGRRG D+RGI I+M+
Sbjct: 499  FATETFSIGLNMPAKTVVFTSVRKFDGISLRYVTPSEFIQMSGRAGRRGLDERGIVIMMI 558

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            DE+ME    KD+V G+   L S F L Y  ILNLM R EG  + E +++  F+QFQ   +
Sbjct: 559  DEKMEPVAAKDIVRGEQDKLNSAFYLGYNMILNLM-RVEG-ISPEFMLERCFYQFQNAAS 616

Query: 543  LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
            +  + K++ +LE++   +    E EV EY+ L+  +      +   IT P+ +L +L +G
Sbjct: 617  VNGLEKQLVELEQKRLDMIIPNEGEVKEYYDLRQALTNYATDMREVITHPQYLLKFLQAG 676

Query: 603  RLIKVREGGTDWGWGVVVNVVK-KPSAG----------------------------VGT- 632
            RL+K++    ++GWGVVVN +K KP+ G                            VG  
Sbjct: 677  RLVKIKYKDYEFGWGVVVNFMKVKPARGQKEEDIKASQSVVVDVLMSVAVDGATPQVGAK 736

Query: 633  ----LP---------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
                LP          +G   +VPV    I ++  IR+ +P DLR  + R ++  +++E+
Sbjct: 737  LTEDLPPGVRPPAPGEKGKMEVVPVMNGTIDSIGHIRVFLPNDLRTQEQRNTVRKSLEEV 796

Query: 680  ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKA 738
              RFP G+  L+P+++M I D     L+ +IE LEHK+  H L+ S     +   +  K 
Sbjct: 797  SKRFPDGIAILDPIENMGINDEGFKKLLRKIEVLEHKMLNHSLHNSDALPALYDQYHTKV 856

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
             +++EI+  + K+ D+      DELKNR RVL++L  ++   VVQLK R AC I TGDEL
Sbjct: 857  LLSNEIKDTRKKINDALSVLQLDELKNRKRVLRRLTFVNDQDVVQLKARVACEISTGDEL 916

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            +++EL+FNG FNDL     AA+ S FI  +KS +  NL+ ELAKP +++Q  AR IA+I 
Sbjct: 917  VLSELLFNGFFNDLQPEVCAAVLSVFIFEEKSDDPPNLKEELAKPFREIQAQARTIAKIS 976

Query: 859  NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
             E K+ VN +EY++   +P LM+V+Y W+ GA+FA + +MTD++EGS+IR  RRL+E L 
Sbjct: 977  MESKVLVNEEEYLQG-FKPQLMEVVYAWTNGASFATICKMTDVYEGSLIRLFRRLEELLR 1035

Query: 919  QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            Q+  AA+ +G   LE+KF  A   +RR I+ + SLYL
Sbjct: 1036 QIAQAAKVMGSEELEQKFELALTKVRRDIVAAQSLYL 1072


>gi|321262713|ref|XP_003196075.1| ATP-dependent RNA helicase (mRNA transport regulator MTR4)
            [Cryptococcus gattii WM276]
 gi|317462550|gb|ADV24288.1| ATP-dependent RNA helicase (mRNA transport regulator MTR4), putative
            [Cryptococcus gattii WM276]
          Length = 1065

 Score =  886 bits (2290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/977 (47%), Positives = 630/977 (64%), Gaps = 60/977 (6%)

Query: 15   EDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYS 74
            +D      P +E+  K   L     H+VA+P  Y        H     P      A+TY 
Sbjct: 94   KDFADVAAPGQEAKLK---LVHQVRHQVAIPPDYPYIPINQ-HKRKDPP------ARTYK 143

Query: 75   FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
            FELDPFQ VS +C+ERNESVLVSAHTSAGKT VAE+AIA   ++ +RV+YTSP+KALSNQ
Sbjct: 144  FELDPFQFVSTSCIERNESVLVSAHTSAGKTVVAEFAIATCLKEGRRVVYTSPIKALSNQ 203

Query: 135  KYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM 194
            K+RE  + F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM
Sbjct: 204  KFREFTETFGDVGLMTGDVTINPEASCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYM 263

Query: 195  KDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQ 254
            +D+ERGVVWEE+II LP +++ VFLSAT+ N+ +FAEWIC  H+QPCHVVYTDFRPTPLQ
Sbjct: 264  RDKERGVVWEETIILLPHSVRYVFLSATIPNSMEFAEWICATHQQPCHVVYTDFRPTPLQ 323

Query: 255  HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG- 313
            HY+FP G  G+YLVVDEK  FR+DNF K     L Q  G    N              G 
Sbjct: 324  HYLFPAGSEGIYLVVDEKSNFRDDNFQKAM-AALAQGQGEDPANPSGGKGKKGKTKKGGA 382

Query: 314  ----GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                 SDI+KIV++IM R   PVI+F+FS+RECE  AM M K DFNT +E  TV QVF++
Sbjct: 383  LKGETSDIYKIVQLIMRRNLNPVIIFAFSKRECEDLAMQMQKFDFNTPDEAATVAQVFES 442

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            A+  L+E+D+ L  IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+KALFATETF+
Sbjct: 443  AIGSLSEDDKKLSQIEGILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKALFATETFS 502

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
            +GLNMPAKTVVFT+V+K+DG   R +  GEYIQMSGRAGRRG D RGI I+M DE++E  
Sbjct: 503  IGLNMPAKTVVFTSVRKFDGKDFRNLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPE 562

Query: 490  TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
              K MV G+   L S F L Y  I+NLM R EG  + E++++  F QFQ   ++P + K+
Sbjct: 563  AAKGMVKGQADRLDSAFHLGYNMIINLM-RVEG-VSPEYMLERCFFQFQNSMSVPVLQKQ 620

Query: 550  VSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
            + + E E  ++    E E+ EY+ L+  + +  +   + IT P   L +L +GRL+++R+
Sbjct: 621  LKEAEAERDAIVIEREDEIEEYYDLRQQLKERGQDFQAVITHPAYCLRFLQAGRLVEIRD 680

Query: 610  GGTDWGWGVVV-------------------------------------NVVKKPSAGVGT 632
            G  D+GWGVVV                                     ++ +  SA   +
Sbjct: 681  GDKDFGWGVVVAFNKVVNQRGRPPIWTDQDPPQKQYIVDVLTRIESGASIPRDRSASEIS 740

Query: 633  LPS---RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
             PS   +G   I+   L  + ++S+ R+++P DLR    + +   AV E++ R P G P 
Sbjct: 741  PPSGADKGEVAIIACSLSTVQSISQYRVNLPKDLRGQQEKNTAFRAVNEIKKRMPDGPPL 800

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLK 748
            L+P+K M I D   +DLV +I  LE++L +  + KS +  ++   + RK +    ++ LK
Sbjct: 801  LDPIKSMGISDKSFIDLVKKIALLENRLQSLEITKSPELPRLYDLYDRKQKSIQSVKSLK 860

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
             ++         +ELK+R RVL++LG   AD VV++KGR AC I TGDEL++TE+MF GT
Sbjct: 861  RRIDSVHDILQLEELKSRKRVLRRLGFTTADDVVEMKGRVACEISTGDELMLTEMMFGGT 920

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            FN L   Q AAL SCF+  +KS  ++ L+ ELA PL+ LQE+A+ IA++ NE  + +  D
Sbjct: 921  FNTLAPEQCAALLSCFVFQEKSEAKVRLKEELAAPLRTLQETAKGIAKVSNESGIAIVED 980

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            EYV+S  +  +MDV+  W KGA F+++ +MTD+FEGSIIR  RRL E + Q+  AA A+G
Sbjct: 981  EYVQS-FKVEMMDVVLQWCKGAKFSQICEMTDVFEGSIIRCFRRLQELIRQMGQAAHAIG 1039

Query: 929  EVNLEKKFAAASESLRR 945
               LE+KFA + E L R
Sbjct: 1040 NTELEEKFAKSMELLER 1056


>gi|242766394|ref|XP_002341161.1| ATP dependent RNA helicase (Dob1), putative [Talaromyces stipitatus
            ATCC 10500]
 gi|218724357|gb|EED23774.1| ATP dependent RNA helicase (Dob1), putative [Talaromyces stipitatus
            ATCC 10500]
          Length = 1078

 Score =  886 bits (2290), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/969 (47%), Positives = 642/969 (66%), Gaps = 59/969 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        +   +  V   E A+T+ F LDPFQ+ +V  ++R ES
Sbjct: 122  LSHQVRHQVALPPNYP-------YVPISQHVPPEEPARTWPFTLDPFQQTAVHSIQREES 174

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + +  QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 175  VLVSAHTSAGKTVVAEYAIAQSLKKNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 234

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EV WV+FDEIHYM+D  RGVVWEE+II LP  
Sbjct: 235  TINPTATCLVMTTEILRSMLYRGSEIMREVGWVVFDEIHYMRDATRGVVWEETIILLPDK 294

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI +LHKQPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 295  VRYVFLSATIPNAMQFAEWIVYLHKQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 354

Query: 274  QFREDNFVKLQDTFLKQK-------IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIME 326
             FREDNF K   +  + K       +  R+  GK   +  KGG     SDIFKIVKMIM 
Sbjct: 355  VFREDNFQKAMSSIAENKGDDPANALANRKGKGK-DKKFNKGGK-KDQSDIFKIVKMIML 412

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            R + PVIVFSFS+RECE +A++MSKL FN   EK+ V +VF +A++ L+EEDR L  I+ 
Sbjct: 413  RSYNPVIVFSFSKRECEANALAMSKLAFNDDSEKEMVSKVFNSAIEMLSEEDRKLKQIQN 472

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI +HH GLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 473  LLPLLRRGIGIHHGGLLPILKETIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTSVRK 532

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG   R++   E+IQMSGRAGRRG D+RGI I+MV E+ME    K++V G+   L S F
Sbjct: 533  FDGIDTRWVTPSEFIQMSGRAGRRGLDERGIVIMMVGEEMEPAVAKEIVRGEQDRLNSAF 592

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + +++++  F+QFQ   ++  + K++++LE +  +++   EA
Sbjct: 593  HLGYNMILNLM-RVEG-ISPDYMLEKCFYQFQNTASVAGLEKELAELETKRVNMNIPDEA 650

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN----- 621
             + +Y++L+  +++    +   I+ P+  L +L  GRL+ ++  G D+GWG VVN     
Sbjct: 651  TIQDYYELRKQLSKYTDDMQEVISHPDYCLPFLQPGRLVHIKHQGNDFGWGAVVNYKQRR 710

Query: 622  ---------------------VVKKPSAGV--------GTLPSRGGG----YIVPVQLPL 648
                                 V +  + G         G  P + G      +VPV L  
Sbjct: 711  SKDPKEILSAQESYIVDVLLEVAEGSATGTRTHTGLPPGVRPPKEGEKSHMQVVPVLLRC 770

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            + ++S +R+ +P +++ +D+R S+  +++E++ RFP GL  L+P+++M I+D     L+ 
Sbjct: 771  LQSISHVRIFLPKEVQTVDSRASVKRSLEEIKKRFPDGLALLDPIENMNIKDISFKKLMR 830

Query: 709  QIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            ++E LE +L A+PL+ S    ++   +  K E+  +I+ +K K+ D+      DELK R 
Sbjct: 831  KVEVLESRLLANPLHNSPRLPELYDQYSEKVELGVQIKAIKKKISDAMSIIQLDELKCRK 890

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            RVL++L  I+ + VVQLK R AC I TGDEL+++EL+FN  FN L   Q AA+ SCF+  
Sbjct: 891  RVLRRLDFINKEEVVQLKARVACEISTGDELMLSELLFNSFFNTLTPEQCAAVLSCFVFE 950

Query: 828  DKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
            +K+ +   L R EL KPL+++Q  AR IA+I  E KL +N +EYV+S     LMDVIY W
Sbjct: 951  EKAKDTPELTREELIKPLKEIQAQARVIAKISMESKLAINEEEYVQS-FHWELMDVIYEW 1009

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            + G +FA + QMTD++EGS+IR  RRL+E L Q+  AA+ +G   LE+KF  +   +RR 
Sbjct: 1010 AHGMSFAGICQMTDVYEGSLIRVFRRLEELLRQMGEAAKVMGNEELEQKFETSLTKVRRD 1069

Query: 947  IMFSNSLYL 955
            I+ + SLYL
Sbjct: 1070 IVAAQSLYL 1078


>gi|169604472|ref|XP_001795657.1| hypothetical protein SNOG_05249 [Phaeosphaeria nodorum SN15]
 gi|111066520|gb|EAT87640.1| hypothetical protein SNOG_05249 [Phaeosphaeria nodorum SN15]
          Length = 1060

 Score =  886 bits (2289), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 484/1037 (46%), Positives = 653/1037 (62%), Gaps = 93/1037 (8%)

Query: 8    GKRKAPEEDLHVTGTP-------EEEST--------KKQR-----------NLTRSCVHE 41
            G  K+P ED H++  P       +E+ST        K+QR           +       E
Sbjct: 28   GDVKSPVEDAHMSDAPAEVPEAAQEDSTENESAQILKRQRRDEEPEPIVTDDFETEQSRE 87

Query: 42   VAVPSGYALTKD--------EAIHGTFANPVYN----------GEMAKTYSFELDPFQRV 83
            VA  +G   T+D        +  H     P Y+           E A+T+ F LDPFQ+V
Sbjct: 88   VAAAAGLQATQDGQAVVLSHQVRHQVALPPDYDYVPISEHKPPQEPARTWPFTLDPFQQV 147

Query: 84   SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
            S+A ++RNESVLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF
Sbjct: 148  SIASIQRNESVLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFMAEF 207

Query: 144  KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
             DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDE+HY++D+ RGVVW
Sbjct: 208  GDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEVHYLRDKSRGVVW 267

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EE+II LP  ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  
Sbjct: 268  EETIILLPDKVRYVFLSATIPNAMQFAEWITKTHGQPCHVVYTDFRPTPLQHYFFPQGAD 327

Query: 264  GLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS------GRMAKGGSGSGGSDI 317
            G++LVVDEK  FRE+NF K   + +  K G   ++  A        +    G     SDI
Sbjct: 328  GIHLVVDEKGVFREENFQKAMAS-IADKAGTTADDKLAKMKGKGKNKKTNTGGNKEQSDI 386

Query: 318  FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
            +KIVKMIM + + PVIVFSFS+RECE +A+SMS L FN   EK  V +VF +A++ L+EE
Sbjct: 387  YKIVKMIMVKSYNPVIVFSFSKRECENYALSMSSLAFNDDSEKAMVTKVFNSAIEMLSEE 446

Query: 378  DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
            DR LP I+ +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAK
Sbjct: 447  DRALPQIQHILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAK 506

Query: 438  TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLG 497
            TVVFT+V+K+DG + R++  GE+IQMSGRAGRRG DDRGI I+M+D  ME     ++V G
Sbjct: 507  TVVFTSVRKFDGVAQRWVTPGEFIQMSGRAGRRGLDDRGIVIMMIDHSMEPAVANEIVRG 566

Query: 498  KPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEA 557
            +   L S F L Y  ILNLM R EG  + E +++  F QFQ    +  + K++  LE E 
Sbjct: 567  QQDNLNSAFHLGYNMILNLM-RVEG-ISPEFMLERCFFQFQNTAGVSTLEKQLQALENER 624

Query: 558  ASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWG 617
             +   + EA V +Y+ L+  +    K +   I  P   L +L SGR++KV+    D+GWG
Sbjct: 625  LNTIITDEATVKDYYNLRQQLDTHTKDIRDVIMHPNYCLQFLQSGRMVKVKYQDHDFGWG 684

Query: 618  VV---------------------VNVVKKPSAGVGTLPSRGGGY---------------- 640
             V                     V+V+    A    +P    G                 
Sbjct: 685  AVVGFQARRANKGEVIPPQESYLVDVLLSVDANTKYIPQSSNGVLPPGVRPPPPGEKGKM 744

Query: 641  -IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE 699
             +V V L  I ++  +R+ +P +L+  D + S+  A+ E++ RFP G+  L+P+++MKI 
Sbjct: 745  EVVSVVLNCIESIGHLRVFLPSELKTTDQKNSVRKALDEVKKRFPDGIAVLDPIENMKIG 804

Query: 700  DPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQK 758
            D     L+ +IE LE +L ++PL+ S    ++   +  K  +  +I++ K ++ D+    
Sbjct: 805  DDSFKRLLRKIEVLESRLLSNPLHNSPRLPELYSQYANKMTIGDKIKKTKKEIADALSVI 864

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              DELK+R RVL++LG ID   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q A
Sbjct: 865  QLDELKSRKRVLRRLGFIDDADVVQLKARVACEISTGDELVLSELLFNRFFNELTPEQCA 924

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
            A  SCFI  +KS E   L+ ELAKP +++Q+ AR IA+I  E KL VN +EY++S  +  
Sbjct: 925  ACLSCFIFEEKSKEVPALKEELAKPYREIQQQARVIAKISVESKLTVNEEEYLKS-FKFE 983

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            LMDV+Y WSKGATFAE+ +MTD++EGS+IR  RRL+E L Q+  A++ +G   LE+KF A
Sbjct: 984  LMDVVYAWSKGATFAEICKMTDVYEGSLIRLFRRLEELLRQIAQASKVMGSEELEQKFTA 1043

Query: 939  ASESLRRGIMFSNSLYL 955
            A + +RR ++ + SLYL
Sbjct: 1044 ALDLVRRDLVAAQSLYL 1060


>gi|119501106|ref|XP_001267310.1| ATP dependent RNA helicase (Dob1), putative [Neosartorya fischeri
            NRRL 181]
 gi|119415475|gb|EAW25413.1| ATP dependent RNA helicase (Dob1), putative [Neosartorya fischeri
            NRRL 181]
          Length = 1082

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/970 (48%), Positives = 633/970 (65%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+V+VA ++R ES
Sbjct: 125  LSHQVRHQVAIPPNYPYVPISQ-HKPPENP------ARVWPFTLDPFQQVAVASIQREES 177

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 178  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 237

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 238  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLPDK 297

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP GG G++LVVDEK 
Sbjct: 298  VRYVFLSATIPNAMQFAEWIVKMHNQPCHVVYTDFRPTPLQHYFFPAGGEGIFLVVDEKG 357

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   +   +K G    +  A         R+ KGG+  G SDI+KIVKMIM 
Sbjct: 358  AFREENFQKAMGSIADKK-GDDPSDAMAKRKGKGKDKRLNKGGN-EGPSDIYKIVKMIML 415

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A+ MS L FN   EK+ V +VF +A++ L+EEDRNLP I+ 
Sbjct: 416  KNLNPVIVFSFSKRECEACALKMSTLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQN 475

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 476  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 535

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E++QMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F
Sbjct: 536  FDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF 595

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ    + D+ K++ + EE+ A++  S E 
Sbjct: 596  HLGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGVADLEKQLQEFEEKRANMTISDEG 653

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV------ 620
             + EY++L+  + +    + + I+ P+  L ++  GRL+ ++    D+GWGVVV      
Sbjct: 654  TIREYYELRTQLDKFADDIQAVISHPDYSLTFMSPGRLVHIKHKDKDFGWGVVVNYKQRK 713

Query: 621  ---------------------NVVKKPSAGVGTLPSRGGGY------------IVPVQLP 647
                                 N+ + PS    T      G             +VPV   
Sbjct: 714  PPKNSTEEIPRDKRYVVDVLLNIAEGPSVATKTFEELPSGVRPVKEGDNSRMEVVPVLTQ 773

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I  +S +R+ +P DL P +A+  +  ++ E+  RFP G+  L+P++DM I+D     L+
Sbjct: 774  CIRAISHVRMKLPKDLNPKEAKNGVKKSLAEIHKRFPDGIATLDPIEDMNIKDESFKKLL 833

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             ++E LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      DELK R
Sbjct: 834  RKVEVLESRLLSNPLHNSPRLPELYEQYSEKVELGTKIKETKKKISEAMSIMQLDELKCR 893

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN L   Q+AA+ S F+ 
Sbjct: 894  KRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQIAAVLSVFVF 953

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +KS E   L R ELAKPL+++Q  AR +A++  E KL VN +EYV S     LM+VIY 
Sbjct: 954  EEKSKETPALTRDELAKPLKEIQAQARIVAKVSQESKLAVNEEEYVNS-FHWELMEVIYE 1012

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++  MTD++EGS+IR  RRL+E L Q+  A++ +G   LE KF  A   +RR
Sbjct: 1013 WANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQASKVMGNEELESKFEEALTKVRR 1072

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1073 DIVAAQSLYL 1082


>gi|238883476|gb|EEQ47114.1| ATP-dependent RNA helicase DOB1 [Candida albicans WO-1]
          Length = 1062

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/996 (46%), Positives = 645/996 (64%), Gaps = 74/996 (7%)

Query: 13   PEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--- 69
            P E L  + T + ++  K ++  R   H+VA+P  Y              P+  GE    
Sbjct: 88   PSEGLSNSATVDADNKLKLKHQIR---HQVAIPPSYPYV-----------PI--GEHKRK 131

Query: 70   --AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
              A+TY F LDPFQ  +++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP
Sbjct: 132  HEARTYPFTLDPFQDTAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSP 191

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+REL   F DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWV+
Sbjct: 192  IKALSNQKFRELQAIFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVV 251

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HYM+D+ RGVVWEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTD
Sbjct: 252  FDEVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD 311

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            FRPTPLQHY+FP GG G++LVVDEK  FRE+NF K   T       G       SGR  K
Sbjct: 312  FRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMATISDN--SGDDPASSDSGRGNK 369

Query: 308  GGSGS-------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
             G  +       G  DI+KIVKMI  +K+ PVIVFSFS+R+CE  A+ MSKLDFNT EE+
Sbjct: 370  KGKTNKGRNHQDGKGDIYKIVKMIYMKKYNPVIVFSFSKRDCESLALKMSKLDFNTDEER 429

Query: 361  DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
            +++ Q+F NA++ L E DR LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K
Sbjct: 430  NSLTQIFYNAIELLPEADRELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLK 489

Query: 421  ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
             LFATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+
Sbjct: 490  VLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIM 549

Query: 481  MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            M+DE+ME    K MV G+   L S F L Y  ILNLM R EG  + E ++++SF QFQ  
Sbjct: 550  MIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQKA 607

Query: 541  KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
             ++P +  K+++ ++E A +    E  + +Y+ LK  + +  + +   IT P  +L +L 
Sbjct: 608  SSVPILEGKLAQCKQEFADITIEDEPIIKDYYDLKQQLLKYNEDVRKVITHPGNILPFLQ 667

Query: 601  SGRLIKVREGGTDWGWGVV----------------------------------VNVVKK- 625
             GR+IKV+ G  D+GWG+V                                  VN++KK 
Sbjct: 668  DGRVIKVKIGDLDYGWGMVTTFTKRNRRHQEEFAPHDAYVVEVFITTMFIDSPVNLIKKF 727

Query: 626  -PSAGVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
             P    G  P++ G       + + L  I  +S +RL VP D +   A+++++  +++L 
Sbjct: 728  NPMLPEGIRPAKSGEQTRAEFISITLSSIEKISTVRLRVPDDYKSSTAKRTLVKTLKDLP 787

Query: 681  SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAE 739
             R P G+P ++PV+ MKI D +   L+ +I+ L+ K+ ++PLN S   + +   +  K +
Sbjct: 788  KRLPDGIPLIDPVQSMKITDDDFKKLLQKIDILDSKIVSNPLNNSARLDDLYAKYTAKVD 847

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +N++I++L+ ++  ++     D+L N  RVLKKL    ++ VV+LKGR A  + TGDEL+
Sbjct: 848  LNNQIKKLEEQIFQAKSIIQLDQLSNMKRVLKKLEFTGSEEVVELKGRVAAELSTGDELM 907

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+F+G FN+L   Q+  L S FI  +++ E   L+ ELA+P + + E+A KIA+I  
Sbjct: 908  ITELLFSGFFNELTPQQICGLLSAFIFQERAKELPKLKPELAEPAKVIHETANKIAKISK 967

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            +  LE+   +Y+E      L++V++ WS GA+F+ + +MTDI+EGSIIR+ RR  E + Q
Sbjct: 968  QSGLEIVEKDYIEQ-FNLALVEVVFVWSNGASFSSICKMTDIYEGSIIRALRREIELIKQ 1026

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L  A++ +G   L  KF    E + R  +  +SLY+
Sbjct: 1027 LVDASKIIGNQELVDKFEKCIELINRDFVQVSSLYM 1062


>gi|68488964|ref|XP_711675.1| hypothetical protein CaO19.1335 [Candida albicans SC5314]
 gi|68489001|ref|XP_711657.1| hypothetical protein CaO19.8915 [Candida albicans SC5314]
 gi|77023008|ref|XP_888948.1| hypothetical protein CaO19_1335 [Candida albicans SC5314]
 gi|46432976|gb|EAK92435.1| hypothetical protein CaO19.8915 [Candida albicans SC5314]
 gi|46432995|gb|EAK92453.1| hypothetical protein CaO19.1335 [Candida albicans SC5314]
 gi|76573761|dbj|BAE44845.1| hypothetical protein [Candida albicans]
          Length = 1106

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/996 (46%), Positives = 645/996 (64%), Gaps = 74/996 (7%)

Query: 13   PEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--- 69
            P E L  + T + ++  K ++  R   H+VA+P  Y              P+  GE    
Sbjct: 132  PSEGLSNSATVDADNKLKLKHQIR---HQVAIPPSYPYV-----------PI--GEHKRK 175

Query: 70   --AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
              A+TY F LDPFQ  +++C++RNESVLVSAHTSAGKT VAEYAIA + RDKQRVIYTSP
Sbjct: 176  HEARTYPFTLDPFQDTAISCIDRNESVLVSAHTSAGKTVVAEYAIAQSLRDKQRVIYTSP 235

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+REL   F DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWV+
Sbjct: 236  IKALSNQKFRELQAIFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVV 295

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HYM+D+ RGVVWEE+II LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTD
Sbjct: 296  FDEVHYMRDKSRGVVWEETIILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD 355

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            FRPTPLQHY+FP GG G++LVVDEK  FRE+NF K   T       G       SGR  K
Sbjct: 356  FRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMATISDN--SGDDPASSDSGRGNK 413

Query: 308  GGSGS-------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
             G  +       G  DI+KIVKMI  +K+ PVIVFSFS+R+CE  A+ MSKLDFNT EE+
Sbjct: 414  KGKTNKGRNHQDGKGDIYKIVKMIYMKKYNPVIVFSFSKRDCESLALKMSKLDFNTDEER 473

Query: 361  DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
            +++ Q+F NA++ L E DR LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K
Sbjct: 474  NSLTQIFYNAIELLPEADRELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLK 533

Query: 421  ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
             LFATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+
Sbjct: 534  VLFATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGGEYIQMSGRAGRRGLDDRGIVIM 593

Query: 481  MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            M+DE+ME    K MV G+   L S F L Y  ILNLM R EG  + E ++++SF QFQ  
Sbjct: 594  MIDEKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQKA 651

Query: 541  KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
             ++P +  K+++ ++E A +    E  + +Y+ LK  + +  + +   IT P  +L +L 
Sbjct: 652  SSVPILEGKLAQCKQEFADITIEDEPIIKDYYDLKQQLLKYNEDVRKVITHPGNILPFLQ 711

Query: 601  SGRLIKVREGGTDWGWGVV----------------------------------VNVVKK- 625
             GR+IKV+ G  D+GWG+V                                  VN++KK 
Sbjct: 712  DGRVIKVKIGDLDYGWGMVTTFTKRNRRHQEEFAPHDAYVVEVFITTMFIDSPVNLIKKF 771

Query: 626  -PSAGVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
             P    G  P++ G       + + L  I  +S +RL VP D +   A+++++  +++L 
Sbjct: 772  NPMLPEGIRPAKSGEQTRAEFISITLSSIEKISTVRLRVPDDYKSSTAKRTLVKTLKDLP 831

Query: 681  SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAE 739
             R P G+P ++PV+ MKI D +   L+ +I+ L+ K+ ++PLN S   + +   +  K +
Sbjct: 832  KRLPDGIPLIDPVQSMKITDDDFKKLLQKIDILDSKIVSNPLNNSARLDDLYAKYTAKVD 891

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +N++I++L+ ++  ++     D+L N  RVLKKL    ++ VV+LKGR A  + TGDEL+
Sbjct: 892  LNNQIKKLEEQIFQAKSIIQLDQLSNMKRVLKKLEFTGSEEVVELKGRVAAELSTGDELM 951

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+F+G FN+L   Q+  L S FI  +++ E   L+ ELA+P + + E+A KIA+I  
Sbjct: 952  ITELLFSGFFNELTPQQICGLLSAFIFQERAKELPKLKPELAEPAKVIHETANKIAKISK 1011

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            +  LE+   +Y+E      L++V++ WS GA+F+ + +MTDI+EGSIIR+ RR  E + Q
Sbjct: 1012 QSGLEIVEKDYIEQ-FNLALVEVVFVWSNGASFSSICKMTDIYEGSIIRALRREIELIKQ 1070

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L  A++ +G   L  KF    E + R  +  +SLY+
Sbjct: 1071 LVDASKIIGNQELVDKFEKCIELINRDFVQVSSLYM 1106


>gi|389742734|gb|EIM83920.1| antiviral helicase [Stereum hirsutum FP-91666 SS1]
          Length = 1030

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/996 (47%), Positives = 637/996 (63%), Gaps = 72/996 (7%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG+ E   ++ +  L     H+VAVP GY        H   A P      A+ Y F LD
Sbjct: 48   LTGSTEAAGSRLE--LKHQVRHQVAVPPGYNYIPISQ-HVPPAKP------AREYKFTLD 98

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA A  +KQRVIYTSP+KALSNQKYRE
Sbjct: 99   PFQQVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQALANKQRVIYTSPIKALSNQKYRE 158

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT +P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 159  MEAEFGDVGLMTGDVTRNPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 218

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  ++ VFLSAT+ NA QF EWIC  H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 219  RGVVWEETIILLPHTVRYVFLSATIPNAMQFCEWICKSHEQPCHVVYTDFRPTPLQHYLF 278

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSG------- 311
            P GG G+YLV+DEK +FRED F K     L+   G    + K+                 
Sbjct: 279  PAGGEGIYLVLDEKGEFREDMFTKAMG-MLQASKGEDPADSKSGAGRKGKSKKGGDKKAI 337

Query: 312  --SGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
               G SDI KI++MIM + + PVIVF+FS+RECE  A+ +SK +FN+ +E+ TV ++F+N
Sbjct: 338  HLKGPSDISKIIRMIMLKNYNPVIVFAFSKRECEALALQLSKFEFNSADEQLTVSKIFEN 397

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            A+  L+ +DR LP I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF+
Sbjct: 398  AIASLSPDDRTLPQIANILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKTLFATETFS 457

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
            +GLNMPAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E  
Sbjct: 458  IGLNMPAKTVVFTAARKFDGREFRDLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPP 517

Query: 490  TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
              K+M+ G+   L S F L Y  +LNLM       + E++++  F QFQ    +P +  +
Sbjct: 518  AAKNMIKGEADRLDSAFHLGYNMVLNLMKIE--VISPEYMLERCFFQFQSSAGVPMLEDE 575

Query: 550  VSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
            + K EE+ +S+    E  VAEY++ +  + Q+       IT P   L +L  GRL+KV+ 
Sbjct: 576  LKKEEEKKSSMVIQDEDRVAEYYEFRQQLEQMNADFRDVITHPNYSLPFLQPGRLVKVKH 635

Query: 610  GGTDWGWGVVVNVVK------KPSAGVGTLP---------------------------SR 636
               D+GWGV++N  K      +P      LP                           + 
Sbjct: 636  KELDFGWGVILNYSKRLPGKNRPMPKAEELPPHEQYILDVLLNCVKGSVVPKDRNNMTAT 695

Query: 637  GGG--------------YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
             GG               +VPV L  I  +S +R+ +P DLR L +R+++  +VQE+  R
Sbjct: 696  PGGIQPWTPGCGLKSEPLVVPVLLSTIEGISHLRIFLPKDLRNLQSRETVWKSVQEVHRR 755

Query: 683  FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVN 741
             P G+  L+P+++M I D +   LV +I+ +E K+FA PL+K     ++   +  K E  
Sbjct: 756  CPDGIALLDPIENMGITDDKFKALVKKIQTMEQKMFASPLHKDPRLPELYSQYTLKKESQ 815

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
               + LK +++ +      +ELK+R RVL++LG   AD +V +KGR AC I TGDELL+T
Sbjct: 816  ERARALKKRIQATNDVLQMEELKSRKRVLRRLGFTTADDIVDMKGRVACEISTGDELLLT 875

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+FNG FN L   Q A L SCF+  +KS +   L+ ELA PL+ +QE AR+IA++  E 
Sbjct: 876  ELIFNGAFNPLTPEQCAGLLSCFVFTEKSEQVTKLKEELAAPLRVMQEIARRIAKVSRES 935

Query: 862  KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            KL +  +EYV+S  +  LMD +  W +GA+F+++ ++TD FEGS+IR  RRL E + Q+ 
Sbjct: 936  KLPLVEEEYVQS-FKVELMDAVVQWCRGASFSDICKLTDQFEGSLIRVFRRLQELIRQMC 994

Query: 922  AAAQAVGEVNLEKKFAAASESLRR--GIMFSNSLYL 955
            +AA+ +G   LE+KF  ASE L R   ++F +SLYL
Sbjct: 995  SAAKVIGNTELEQKFTKASEMLERPNSVIFCSSLYL 1030


>gi|189195840|ref|XP_001934258.1| ATP-dependent RNA helicase DOB1 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187980137|gb|EDU46763.1| ATP-dependent RNA helicase DOB1 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1054

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/966 (47%), Positives = 634/966 (65%), Gaps = 55/966 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y    D         P    E A+T+ F LDPFQ+VS+A ++RNES
Sbjct: 100  LSHQVRHQVALPPDY----DYVPINEHKPP---QEPARTWPFTLDPFQQVSIASIQRNES 152

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 153  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFMAEFGDVGLMTGDV 212

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDE+HY++D  RGVVWEE+II LP  
Sbjct: 213  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEVHYLRDPARGVVWEETIILLPDK 272

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 273  VRYVFLSATIPNAMQFAEWITKNHSQPCHVVYTDFRPTPLQHYFFPAGAEGIHLVVDEKG 332

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA------SGRMAKGGSGSGGSDIFKIVKMIMER 327
             FRE+NF K   + +  K G   ++  A        +    G     +DI+KIVKMIM +
Sbjct: 333  VFREENFQKAMSS-IADKAGTDSKDFLAKRKGKGKDKKTNTGGNKDQTDIYKIVKMIMVK 391

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+RECE +A++MS L FN   EK  V +VF +A++ L+EEDR LP I+ +
Sbjct: 392  SYNPVIVFSFSKRECENYALAMSSLAFNDDSEKAMVTKVFNSAIEMLSEEDRQLPQIQHI 451

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 452  LPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 511

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG + R++   E+IQMSGRAGRRG DDRGI I+M++EQME    K++V G+   L S F 
Sbjct: 512  DGVAQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMINEQMEPAVAKEIVRGQQDNLNSAFH 571

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F QFQ    +  + K++ +LE E A+ +   E  
Sbjct: 572  LGYNMILNLM-RVEG-ISPEFMLERCFFQFQSTAGVSHLEKQLEELEHEKANTNIVDEPA 629

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-- 625
            + EY+ L+  +    K +   I +P   L +L  GRL+K++    D+GWG VV    +  
Sbjct: 630  IKEYYNLRQQLDAHTKDMRDVIMQPTYCLQFLQGGRLVKIKYKDFDFGWGAVVAFTPRKG 689

Query: 626  ---------------------------PSAGVGTLP--------SRGGGYIVPVQLPLIS 650
                                       P+   G  P         +G   +VPV L  I 
Sbjct: 690  NKGEIFPPHESYIVDVLLPVASDTKFAPAVNDGLPPGVRPPTAGDKGKMEVVPVVLNCIE 749

Query: 651  TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
            ++  +R+ +P +L+  + R ++  A+ E++ RFP G+  L+P+++M I+D     L+ +I
Sbjct: 750  SIGHLRVFLPNELKSAEQRNNVRKALAEVKKRFPDGIAILDPIENMNIKDDSFKKLLRRI 809

Query: 711  EELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
            E LE +L  +PL+ S    ++   + +K  +  +I+ ++ ++ ++      DELK+R RV
Sbjct: 810  EVLESRLLTNPLHNSPRLPELYSQYAQKIAIGEKIKNVRKEIANALSVIQLDELKSRKRV 869

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            L++LG ID   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q AA  SCFI  +K
Sbjct: 870  LRRLGFIDEADVVQLKARVACEISTGDELVLSELLFNRFFNELTPEQCAACLSCFIFEEK 929

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            + E   L+ ELAKP +++Q+ AR IA++  E KL VN +EY++ T +  LM+V+Y WSKG
Sbjct: 930  TQEVPALKEELAKPYREIQQQARVIAKMSQESKLAVNEEEYLK-TFKYELMEVVYAWSKG 988

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            ATFA++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G   LE+KF A+ E +RR ++ 
Sbjct: 989  ATFAQICKMTDVYEGSLIRLFRRLEELLRQIAQAAKVMGSEELEQKFTASLELVRRDLVA 1048

Query: 950  SNSLYL 955
            + SLYL
Sbjct: 1049 AQSLYL 1054


>gi|403411793|emb|CCL98493.1| predicted protein [Fibroporia radiculosa]
          Length = 1133

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/975 (48%), Positives = 631/975 (64%), Gaps = 70/975 (7%)

Query: 19   VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
            +TG  E  S  + R+  R   H+VAVP  Y        +   +N V     A+ Y F LD
Sbjct: 95   LTGAVEAGSRLELRHQVR---HQVAVPPAYP-------YVPISNHVPPSNPAREYKFTLD 144

Query: 79   PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            PFQ+VSV  ++RNESVLVSAHTSAGKT VAEYAIA   R+KQR        ALSNQKYRE
Sbjct: 145  PFQQVSVYAIQRNESVLVSAHTSAGKTVVAEYAIAQCLRNKQR--------ALSNQKYRE 196

Query: 139  LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
            +  EF DVGLMTGDVT++P+A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+E
Sbjct: 197  MLAEFGDVGLMTGDVTINPSATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKE 256

Query: 199  RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
            RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWIC  H+QPCHVVYTDFRPTPLQHY+F
Sbjct: 257  RGVVWEETIILLPHTVRYVFLSATIPNAMQFAEWICKSHEQPCHVVYTDFRPTPLQHYLF 316

Query: 259  PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG---- 314
            P GG G+YLVV+EK +FREDNF K     L+ K+G    + K+           G     
Sbjct: 317  PAGGEGIYLVVNEKSEFREDNFTKAMG-MLQDKMGDDPADPKSGRGRKGKSKKGGEKKGP 375

Query: 315  SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            SDI KIVKMIM + + PVI+F+FS+RECE  A++MSKL+FN  EE++ +  +F NA+D L
Sbjct: 376  SDIQKIVKMIMLKNYNPVIIFAFSKRECEGLALTMSKLEFNATEEQEIITNIFNNAMDNL 435

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
            +E+DR LP I  +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNM
Sbjct: 436  SEDDRKLPQISNLLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNM 495

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
            PAKTVVFTA +K+DG   R + SGEYIQMSGRAGRRG DDRG+ I+M DE++E    K M
Sbjct: 496  PAKTVVFTAARKFDGREFRNLSSGEYIQMSGRAGRRGLDDRGVVIMMCDEKLEPTAAKGM 555

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            + G+   L S F L Y  +LNLM + EG  + E++++  F QFQ    +P +  ++ + E
Sbjct: 556  IKGEADRLDSAFHLGYNMVLNLM-KVEG-ISPEYMLERCFFQFQSSMGIPVLEDELRREE 613

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
            E   S   + E  V+EY+  +  + Q+       IT P   L +L  GRL+KV+    D+
Sbjct: 614  ERKESFVIADEELVSEYYDYRQQLDQMTADFNEVITHPTYSLPFLQPGRLVKVKYKTLDF 673

Query: 615  GWGVVVNVVK----------------------------------KPSAGVGTLP------ 634
            GWG V+N  K                                  K  + +   P      
Sbjct: 674  GWGAVINFQKRLPPKNSPVPDELPPHEQYIVDVALYCATGSSPPKDRSSIAATPISIQPC 733

Query: 635  ---SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN 691
                +G   +VPV L  I  LS++R+ +P DLR    R+++  +VQE++SRFP+G+P L+
Sbjct: 734  PAGQKGEPLVVPVLLSTIHALSRLRIHLPKDLRSQQPRETVCKSVQEVQSRFPKGIPLLD 793

Query: 692  PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSK 750
            P++DM I+D +   LV +I+ +E KLF+ PL+K    +++   F RK E    I++L+ +
Sbjct: 794  PIQDMDIKDEKFKALVKKIDLMERKLFSSPLHKDPRLSELYTQFVRKQECQTHIRELRKR 853

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
            ++ +      +ELK R RVL++LG   +  +V +KGR AC I TGDELL+TEL+FNG FN
Sbjct: 854  IQATNDVLQMEELKCRKRVLRRLGFTTSADIVDMKGRVACEISTGDELLLTELIFNGVFN 913

Query: 811  DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
             L   Q A L SCF+  +KS +   L+ ELA PL+ +QE AR+IA++  E KL +N ++Y
Sbjct: 914  QLSPEQCAGLLSCFVFTEKSEQITKLKEELAAPLRVMQEIARRIAKVSKESKLPINEEDY 973

Query: 871  VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
            V S  +  LMD +  W +GA+FAE+ ++TD FEGS+IR  RRL E + Q+  AA+ +G  
Sbjct: 974  VLS-FKVELMDAVVQWCRGASFAEICKLTDQFEGSLIRVFRRLQELIRQMSQAAKVIGNT 1032

Query: 931  NLEKKFAAASESLRR 945
             L++KF  ASE L R
Sbjct: 1033 ELQEKFDKASEMLER 1047


>gi|363754569|ref|XP_003647500.1| hypothetical protein Ecym_6303 [Eremothecium cymbalariae DBVPG#7215]
 gi|356891137|gb|AET40683.1| hypothetical protein Ecym_6303 [Eremothecium cymbalariae DBVPG#7215]
          Length = 1075

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/937 (48%), Positives = 633/937 (67%), Gaps = 57/937 (6%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+TY F LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+K
Sbjct: 145  ARTYPFNLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAKSLREKQRVIYTSPIK 204

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYREL  EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWV+FD
Sbjct: 205  ALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFD 264

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HYM+D+ERGVVWEE+II LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYTDFR
Sbjct: 265  EVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTDFR 324

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRM 305
            PTPLQHY+FP  G G++LVVDEK  FRE+NF K   +   Q   G   N   S    G+ 
Sbjct: 325  PTPLQHYLFPAHGDGIHLVVDEKGAFREENFQKAMASISSQT--GDDPNSVNSKGGKGQT 382

Query: 306  AKGGSGSGGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
             KGG+  G S  DI+KIVKMI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD++
Sbjct: 383  FKGGAAKGDSKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDSL 442

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
             ++F+NA+D L E DR LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEG +K LF
Sbjct: 443  AKIFKNAIDLLPETDRELPQIKHLLPLLKRGIGIHHSGLLPILKEVIEILFQEGFLKVLF 502

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRG+ I+M+D
Sbjct: 503  ATETFSIGLNMPAKTVVFTSVRKWDGKQFRWVSGGEYIQMSGRAGRRGLDDRGVVIMMLD 562

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            E+ME    K MV G+   L S F L Y  ILNLM R EG  + E ++++SF+QFQ   ++
Sbjct: 563  EKMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFYQFQNITSV 620

Query: 544  PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
            P + +K+ +L      ++   E  V +Y+ ++  + +  + +   I  P  +L +L  GR
Sbjct: 621  PVMERKLIELTSRLEVIEIDDEKNVKDYYDVRQTLDEYNEDVRKIIAHPSNILSFLQPGR 680

Query: 604  LI--KVREGGTDWGWGVVVNVVKK------------------------------------ 625
            LI  KV E G D+GW  VVN  K+                                    
Sbjct: 681  LIRVKVNEKG-DYGWAAVVNFAKRVNKRDPSVVYADHQSYIVNVIVNTMFADAPINLLKP 739

Query: 626  --PSAGVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
              P    G  P+  G      ++P+ L  I TL  +R+ +P D++    ++ +   ++E+
Sbjct: 740  FNPVLPEGIRPAVEGEKSISTMLPIVLDSIQTLGNLRIFMPSDIKADSQKEVVGKTLKEV 799

Query: 680  ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKA 738
            + RFP+G+P ++P+K MKIED + + L+N+IE LE  + ++P+  S    Q+   +  K 
Sbjct: 800  QRRFPKGIPLIDPIKHMKIEDEDFLKLLNKIEILETNMNSNPIANSAKLRQLYEKYCEKV 859

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
             +  +I+QLK K+ ++Q     D+L+ R RVL++LG   +  +++LKGR AC I +GDEL
Sbjct: 860  AIEGDIKQLKFKINEAQAVIQLDDLRRRKRVLRRLGFCTSSDIIELKGRVACEISSGDEL 919

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            L+TEL+ NG FN+L   Q AAL SCF   ++  E   L+ ELA+PL+ ++E A KIA+I 
Sbjct: 920  LLTELILNGNFNELKPEQAAALLSCFAFQERCKEAPRLKPELAEPLKAMREVASKIAKIV 979

Query: 859  NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
             + K+E+   +YVES  R  LM+V+Y W KGATF ++ +MTD++EGS+IR  +RL+E + 
Sbjct: 980  KDSKIEIVEKDYVES-FRHELMEVVYEWCKGATFTQICKMTDVYEGSLIRMFKRLEELIK 1038

Query: 919  QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +L   +  +G   L++K  AA   + R I+ + SLYL
Sbjct: 1039 ELIDVSNTIGNSALKEKMEAALSMIHRDIVSAGSLYL 1075


>gi|219130196|ref|XP_002185257.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403436|gb|EEC43389.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 998

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/994 (46%), Positives = 650/994 (65%), Gaps = 61/994 (6%)

Query: 2   EESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFA 61
           E +++  K +  E +   + +P E+     R+ +        +P+G+A  + E       
Sbjct: 26  EPAVLPKKPRLEERNSQRSSSPPEDELSNIRSYS---AFPKNLPAGFAPPRVEPPQ---- 78

Query: 62  NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
                 E AKTY+F+LDPFQ  +VA +++ ESVLV+AHTSAGKTAVAEYA+A + +  QR
Sbjct: 79  ------EPAKTYAFKLDPFQAQAVAYIDKEESVLVAAHTSAGKTAVAEYAVAKSLKAGQR 132

Query: 122 VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           VIYTSP+KALSNQK+R+L +EF DVGLMTGD+T++P+A+CLVMTTEILR MLYRGSE+++
Sbjct: 133 VIYTSPIKALSNQKFRDLQEEFDDVGLMTGDITINPDATCLVMTTEILRSMLYRGSELMR 192

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           E++WVI+DE+HYM+D ERGVVWEESII LP  ++ VFLSAT+ NATQFA+WI  +H QPC
Sbjct: 193 EISWVIYDEVHYMRDAERGVVWEESIILLPHRVRFVFLSATIPNATQFADWIAEIHHQPC 252

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
           HVVYT++RPTPLQHY+FP GG GL+LVVDE+ +FRE NF K   +   Q   G   N K 
Sbjct: 253 HVVYTNYRPTPLQHYIFPQGGEGLHLVVDERGKFREANFQKAMASL--QSGNG---NAKK 307

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            GR  +GG     +D+ +IVK+IMER   P I+FSFS+++CE++A+++++ D+    EKD
Sbjct: 308 RGRGKQGGGAGQFADLHRIVKLIMERNLNPCIIFSFSKKDCEKYALALNQEDYTDDVEKD 367

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            V QV+ NA+D L+++DR LP +E +LPLLKRGI +HH GLLP++KE+VE+LF EGL+KA
Sbjct: 368 LVAQVYHNAIDSLSDDDRKLPQVEALLPLLKRGIGIHHGGLLPILKEIVEILFTEGLIKA 427

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETF++G+N PAKTVVFT  +KWDG   R++ SGEYIQMSGRAGRRGKDDRGI I M
Sbjct: 428 LFATETFSIGINAPAKTVVFTNTRKWDGKDFRWVSSGEYIQMSGRAGRRGKDDRGIVIQM 487

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           VDE+ME    KDM+ G P PL S++R+SY  +LNLM R E     E++I+ SFHQFQ EK
Sbjct: 488 VDEKMEPAVCKDMLYGAPNPLNSSYRISYNMLLNLM-RVE-DVDPEYLIRASFHQFQREK 545

Query: 542 ALPDIGKKVSKLEEEAASLDASGEAE---VAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
             P +      LE +A ++D   E E   VAEY+++   +    +K+ + + +P  VL +
Sbjct: 546 DAPGLIADAEILESQAETVDFQSEEEVTLVAEYYQMDQQLLLTRRKIGTIVRKPGYVLKF 605

Query: 599 L-GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGG------YIVPVQLP---- 647
           L   GR + V   G ++GWGV+V+  K+   G G    R         YI+ V L     
Sbjct: 606 LQAPGRFLDVILDGEEFGWGVLVSCKKRQGIGSGGEAGRIASLTNQPEYILDVLLNCVDR 665

Query: 648 ------------------LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                             LI  LS +R+ +P D+   +AR+ +  +V+E+  RFP G+P 
Sbjct: 666 HFDKNRKGKDEDAENVNLLIERLSAVRIFIPQDITTPEARRKVSTSVKEVSKRFPDGIPL 725

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQR---KAEVNHEIQ 745
           L+PV D+ I D   + L+ + E L + L  H L N   D +++   QR   KA++    +
Sbjct: 726 LDPVADLGINDDAFMTLLKRAETLTNLLAEHKLANDFVDSSRLELVQRYEKKADMLERAK 785

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
            L+ + R+ Q    +D+LK   RVLKKLGH+DA GV+Q KGR AC I+T DEL+V EL+F
Sbjct: 786 TLREEARNCQTMAMKDDLKKMKRVLKKLGHVDAGGVIQTKGRTACEINTSDELVVVELIF 845

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQIN----LRMELAKPLQQLQESARKIAEIQNEC 861
            G FNDL   Q  AL SC    +++  + +    L+  L+ P  +LQE AR +A +   C
Sbjct: 846 GGIFNDLSVEQSVALLSCMTFDERNKNEDDPASGLKSFLSNPFYKLQEVARTVARVVISC 905

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            +++N DE+V+    P +M+ ++ W KGA F EV ++T  FEG+ IR+ RRL+E + Q+ 
Sbjct: 906 GIDLNEDEFVDK-FNPGMMEAVFAWCKGAKFIEVQKLTGSFEGTTIRTLRRLEELVRQIT 964

Query: 922 AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           AAA+A+G   LE KF   SE ++R I+F +SLYL
Sbjct: 965 AAAKAIGNHELEAKFEKGSELIKRDIVFCSSLYL 998


>gi|255949946|ref|XP_002565740.1| Pc22g18350 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592757|emb|CAP99123.1| Pc22g18350 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1078

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/962 (48%), Positives = 633/962 (65%), Gaps = 56/962 (5%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+VA+P  Y        H   ANP      AKT+ F LDPFQ+V+V+ ++R ESVLVSAH
Sbjct: 127  HQVAIPPNYPYVPISQ-HKAPANP------AKTWPFTLDPFQQVAVSSIQREESVLVSAH 179

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA + +  QRVIYTSP+KALSNQKYRE   EF DVGLMTGDVT++P A
Sbjct: 180  TSAGKTVVAEYAIAQSLKQNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDVTINPTA 239

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
            +CLVMTTEILR MLYRGSE+++EV WV+FDEIHYM+D  RGVVWEE+II LP  ++ VFL
Sbjct: 240  TCLVMTTEILRSMLYRGSEIMREVQWVVFDEIHYMRDVNRGVVWEETIILLPDKVRYVFL 299

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ NA QFAEWI  +H QPCHVVYT++RPTPLQ+Y FP GG G++LVVDEK  FRE+N
Sbjct: 300  SATIPNAMQFAEWIVKMHDQPCHVVYTNYRPTPLQNYFFPAGGEGIHLVVDEKGVFREEN 359

Query: 280  FVKLQDTFLKQKIGG-----RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            F K       +K         +  GK   +    G   G SDI+KIV+MIM + + PVIV
Sbjct: 360  FQKAMSAIADKKGDDPADALAKRKGKGKDKQINKGGIKGPSDIYKIVRMIMLKNYNPVIV 419

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS+RECE  A+ MSKL FN   EK+ V +VF++A++ L+ EDR LP I+ +LPLL++G
Sbjct: 420  FSFSKRECEAGALQMSKLTFNDDSEKNMVSKVFESAIEMLSPEDRQLPQIQNILPLLQQG 479

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+DG S R+
Sbjct: 480  IGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGTSQRW 539

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            +   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F L Y  IL
Sbjct: 540  VTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAFHLGYNMIL 599

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NLM R EG  + E++++  F QFQ   ++  + K++  LEE+ A++  S E  + EY+ L
Sbjct: 600  NLM-RVEG-ISPEYMLERCFKQFQNTGSVSGLEKELEGLEEKRANMIISDEGTIREYYDL 657

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG----- 629
            +  +      +   IT P   L Y+  GRLI V+    D+GWGVV+N  K+  A      
Sbjct: 658  RKQLDAFADDVQHVITHPNYSLTYIHPGRLIHVKYKDADFGWGVVINQKKRKQANNETEK 717

Query: 630  ------------------------------VGTLPSRGG----GYIVPVQLPLISTLSKI 655
                                           G  P++ G      +VP+ L  I+ +S I
Sbjct: 718  FSPHQSHIVDVLMRMSGGSSIGTKSFQDLPPGVRPAKEGEPTRSEVVPIVLSCITEISHI 777

Query: 656  RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
            R+ +P D+    +R  ++ +V E++ RFP G+P L+P+++M+I+D     L+ +IE LE 
Sbjct: 778  RIMLPKDITSPGSRNDVMKSVDEVKRRFPDGVPLLDPIENMQIKDESFKKLLRKIEVLES 837

Query: 716  KLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
            +L ++PL+ S    ++   +  K ++   I+ +K ++ ++      DELK R RVL++ G
Sbjct: 838  RLLSNPLHNSPRLTELYEQYAEKVDLTANIKAIKKQITEAMSILQLDELKCRKRVLRRFG 897

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
             I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   QVA++ SCF+  +K  E  
Sbjct: 898  FINEADVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVASVMSCFVFEEKVKEAP 957

Query: 835  NL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             L + ELAKPL+++Q  AR IA++  E K+ VN DEYV+S     LM+VIY WS+G +FA
Sbjct: 958  TLTKDELAKPLKEIQSQARIIAKVSQESKMAVNEDEYVQS-FHWELMEVIYEWSQGKSFA 1016

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            ++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G  +LE KF  A   +RR I+ + SL
Sbjct: 1017 DICKMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEDLESKFEEALGKVRRDIVAAQSL 1076

Query: 954  YL 955
            YL
Sbjct: 1077 YL 1078


>gi|70994666|ref|XP_752110.1| ATP dependent RNA helicase (Dob1) [Aspergillus fumigatus Af293]
 gi|66849744|gb|EAL90072.1| ATP dependent RNA helicase (Dob1), putative [Aspergillus fumigatus
            Af293]
          Length = 1082

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/970 (48%), Positives = 632/970 (65%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+V+VA ++R ES
Sbjct: 125  LSHQVRHQVAIPPNYPYVPISQ-HKPPENP------ARVWPFTLDPFQQVAVASIQREES 177

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 178  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 237

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 238  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLPDK 297

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP GG G++LVVDEK 
Sbjct: 298  VRYVFLSATIPNAMQFAEWIVKMHNQPCHVVYTDFRPTPLQHYFFPAGGEGIFLVVDEKG 357

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   +   +K G    +  A         R+ KGG+  G SDI+KIVKMIM 
Sbjct: 358  AFREENFQKAMGSIADKK-GDDPSDAMAKRKGKGKDKRLNKGGN-EGPSDIYKIVKMIML 415

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A+ MS L FN   EK+ V +VF +A++ L+EEDRNLP I+ 
Sbjct: 416  KNLNPVIVFSFSKRECEACALKMSTLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQN 475

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 476  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 535

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E++QMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F
Sbjct: 536  FDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF 595

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ    + D+ K++ + EE+ A++    E 
Sbjct: 596  HLGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGVADLEKQLQEFEEKRANMTIPDEG 653

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV------ 620
             + EY++L+  + +    + + I+ P+  L ++  GRL+ ++    D+GWGVVV      
Sbjct: 654  TIREYYELRTQLDKYADDIQAVISHPDYSLPFMLPGRLVHIKHKDKDFGWGVVVNYKQRK 713

Query: 621  ---------------------NVVKKPSAGVGTLPSRGGGY------------IVPVQLP 647
                                 N+ + PS    T      G             +VPV   
Sbjct: 714  PPKNSTEEIPRDKRYVVDVLLNIAEGPSVATKTFEELPSGVRPVKEGENSRMEVVPVLTE 773

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I  +S IR+ +P DL P +A+  +  ++ E+  RFP G+  L+P++DM I+D     L+
Sbjct: 774  CIRAISHIRMKLPKDLNPKEAKNGVKKSLAEIHKRFPDGIATLDPIEDMNIKDESFKKLL 833

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             ++E LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      DELK R
Sbjct: 834  RKVEVLESRLLSNPLHNSPRLPELYEQYSEKVELGTKIKETKKKISEAMSIMQLDELKCR 893

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN L   Q+AA+ S F+ 
Sbjct: 894  KRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQIAAVLSVFVF 953

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +KS E   L R ELAKPL+++Q  AR +A++  E KL VN +EYV S     LM+VIY 
Sbjct: 954  EEKSKETPALTRDELAKPLKEIQAQARIVAKVSQESKLAVNEEEYVNS-FHWELMEVIYE 1012

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++  MTD++EGS+IR  RRL+E L Q+  A++ +G   LE KF  A   +RR
Sbjct: 1013 WANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQASKVMGNEELESKFEEALTKVRR 1072

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1073 DIVAAQSLYL 1082


>gi|159124976|gb|EDP50093.1| ATP dependent RNA helicase (Dob1), putative [Aspergillus fumigatus
            A1163]
          Length = 1082

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/970 (48%), Positives = 632/970 (65%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+V+VA ++R ES
Sbjct: 125  LSHQVRHQVAIPPNYPYVPISQ-HKPPENP------ARVWPFTLDPFQQVAVASIQREES 177

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 178  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 237

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 238  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLPDK 297

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP GG G++LVVDEK 
Sbjct: 298  VRYVFLSATIPNAMQFAEWIVKMHNQPCHVVYTDFRPTPLQHYFFPAGGEGIFLVVDEKG 357

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   +   +K G    +  A         R+ KGG+  G SDI+KIVKMIM 
Sbjct: 358  AFREENFQKAMGSIADKK-GDDPSDAMAKRKGKGKDKRLNKGGN-EGPSDIYKIVKMIML 415

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A+ MS L FN   EK+ V +VF +A++ L+EEDRNLP I+ 
Sbjct: 416  KNLNPVIVFSFSKRECEACALKMSTLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQN 475

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 476  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 535

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E++QMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F
Sbjct: 536  FDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF 595

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ    + D+ K++ + EE+ A++    E 
Sbjct: 596  HLGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGVADLEKQLQEFEEKRANMTIPDEG 653

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV------ 620
             + EY++L+  + +    + + I+ P+  L ++  GRL+ ++    D+GWGVVV      
Sbjct: 654  TIREYYELRTQLDKYADDIQAVISYPDYSLPFMLPGRLVHIKHKDKDFGWGVVVNYKQRK 713

Query: 621  ---------------------NVVKKPSAGVGTLPSRGGGY------------IVPVQLP 647
                                 N+ + PS    T      G             +VPV   
Sbjct: 714  PPKNSTEEIPRDKRYVVDVLLNIAEGPSVATKTFEELPSGVRPVKEGENSRMEVVPVLTE 773

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I  +S IR+ +P DL P +A+  +  ++ E+  RFP G+  L+P++DM I+D     L+
Sbjct: 774  CIRAISHIRMKLPKDLNPKEAKNGVKKSLAEIHKRFPDGIATLDPIEDMNIKDESFKKLL 833

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             ++E LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      DELK R
Sbjct: 834  RKVEVLESRLLSNPLHNSPRLPELYEQYSEKVELGTKIKETKKKISEAMSIMQLDELKCR 893

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN L   Q+AA+ S F+ 
Sbjct: 894  KRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQIAAVLSVFVF 953

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +KS E   L R ELAKPL+++Q  AR +A++  E KL VN +EYV S     LM+VIY 
Sbjct: 954  EEKSKETPALTRDELAKPLKEIQAQARIVAKVSQESKLAVNEEEYVNS-FHWELMEVIYE 1012

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++  MTD++EGS+IR  RRL+E L Q+  A++ +G   LE KF  A   +RR
Sbjct: 1013 WANGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQASKVMGNEELESKFEEALTKVRR 1072

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1073 DIVAAQSLYL 1082


>gi|449301702|gb|EMC97713.1| hypothetical protein BAUCODRAFT_147755 [Baudoinia compniacensis UAMH
            10762]
          Length = 1074

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/973 (47%), Positives = 644/973 (66%), Gaps = 62/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+V++P  Y        H     P      A+ + F LDPFQ VS+A +ERNES
Sbjct: 113  LSHQVRHQVSLPPDYEYVPISQ-HKRPEKP------AREWPFTLDPFQEVSIASIERNES 165

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 166  VLVSAHTSAGKTVVAEYAIAQCLQNNQRVIYTSPIKALSNQKYREFSAEFGDVGLMTGDV 225

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLY+GSE+++EVAWV+FDE+HYM+D+ RGVVWEE+II LP  
Sbjct: 226  TINPTATCLVMTTEILRSMLYKGSEIMREVAWVVFDEVHYMRDKSRGVVWEETIILLPDK 285

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 286  VRYVFLSATIPNAMQFAEWITKTHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 345

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMA-------KGGSGSGGSDIFKIVKMIME 326
             FRE+NF K     ++++ G    +  A  +         KGG   G +DI+KIVKMIM 
Sbjct: 346  VFREENFNKAMSA-IQERAGDDGSDPMAKRKGKGKDKRTNKGGRRDGPTDIYKIVKMIMM 404

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSFS+RECE +A+ MS+L FN + EK  V +VF +A++ L++ED+ LP I+ 
Sbjct: 405  KNYNPVIVFSFSKRECENYALQMSQLAFNDESEKAMVTKVFNSAIEMLSDEDKELPQIQH 464

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI +HHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 465  ILPLLRRGIGIHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 524

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E+IQMSGRAGRRG D+RGI I+M+DE+ME    KD+V G+   L S F
Sbjct: 525  FDGVSQRWVTPSEFIQMSGRAGRRGLDERGIVIMMIDEKMEPAVAKDIVRGEQDKLNSAF 584

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R E   + E +++  F QFQ   ++  + K++ +LE++ A +    E 
Sbjct: 585  YLGYNMILNLM-RVEA-ISPEFMLERCFFQFQNAASVSGLEKELHELEQKRADMVVENEQ 642

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK-K 625
            E+ EY+ ++ ++     ++ + ITR E +L +L SGRL++V+    D+GWG VVN +K K
Sbjct: 643  EIKEYYDIRQNLNSYAAEMKATITREEYLLKFLQSGRLVRVKYKDYDFGWGAVVNFMKVK 702

Query: 626  PSAG----------------------------VGT-----LP---------SRGGGYIVP 643
            P  G                            VG      LP          +G   +  
Sbjct: 703  PGRGQTAEDIPPGHAVVIDVLMAVAADSTPPPVGARLNDDLPPGVRPPAPGEKGKMEVFS 762

Query: 644  VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
            +    I  +  +R+ +P +LR  ++R ++   ++E+++RFP G+  L+P+++M I D   
Sbjct: 763  IMNGTIDAVGHLRVFLPAELRTQESRNTMRKTLEEVKARFPDGIAILDPIENMHITDEGF 822

Query: 704  VDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDE 762
              L+ +IE LEHKL  +PL+KS+   ++   +  K E+  +I+  + ++ D+      DE
Sbjct: 823  KRLLRKIEVLEHKLLNNPLHKSERLPELYEQYAAKVELTTQIKAKRKQISDALSVLQLDE 882

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
            LKNR RVL++LG I+   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q AA  S
Sbjct: 883  LKNRKRVLRRLGFINDADVVQLKARVACEISTGDELVLSELLFNRFFNELTPEQCAAALS 942

Query: 823  CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            CFI  +KS+E   L+ ELAK  ++++E AR++A++ +E K+ VN +EY++S  +  LM+V
Sbjct: 943  CFIFEEKSNETPTLKDELAKVFREIREQARQVAKVSSESKVVVNEEEYLQS-FKCELMEV 1001

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            ++ W +GA+FA + +MTD++EGS+IR  RRL+E L Q+  A + +G   LE+KF +A   
Sbjct: 1002 VFAWCQGASFATICKMTDVYEGSLIRLFRRLEELLRQMAQAGKVMGSEELEQKFESALTK 1061

Query: 943  LRRGIMFSNSLYL 955
            +RR I+ + SLYL
Sbjct: 1062 VRRDIVAAQSLYL 1074


>gi|238491802|ref|XP_002377138.1| ATP dependent RNA helicase (Dob1), putative [Aspergillus flavus
            NRRL3357]
 gi|220697551|gb|EED53892.1| ATP dependent RNA helicase (Dob1), putative [Aspergillus flavus
            NRRL3357]
 gi|391869301|gb|EIT78502.1| nuclear exosomal RNA helicase MTR4, DEAD-box superfamily [Aspergillus
            oryzae 3.042]
          Length = 1080

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/969 (48%), Positives = 630/969 (65%), Gaps = 58/969 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+VS+A ++R ES
Sbjct: 123  LSHQIRHQVAIPPNYPYVPISE-HKPPENP------ARVWPFTLDPFQQVSIASIQREES 175

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 176  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 235

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D  RGVVWEE+II LP  
Sbjct: 236  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDATRGVVWEETIILLPDK 295

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTD+RPTPLQHY FP G  G++LVVDEK 
Sbjct: 296  VRYVFLSATIPNAMQFAEWIVKMHNQPCHVVYTDYRPTPLQHYFFPAGADGIHLVVDEKG 355

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA------SGRMAKGGSGSGGSDIFKIVKMIMER 327
             FRE+NF K   T   +K G    +  A        +    G   G SDI+KIVKMIM +
Sbjct: 356  VFREENFQKAMSTIADKK-GDDPADAMAKRKGKGKDKKLNKGGNKGPSDIYKIVKMIMIK 414

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+RECE  A+ MS L FN   EK+ V +VF +A++ L+EEDRNLP I+ +
Sbjct: 415  NYNPVIVFSFSKRECESGALQMSNLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQNI 474

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 475  LPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 534

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S R++   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F 
Sbjct: 535  DGFSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAFH 594

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F+QFQ    +  + K++++LEE+ A++  S E  
Sbjct: 595  LGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGVATLEKELAELEEKRANMTISDEGT 652

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN------ 621
            + EY+ L+  I Q    + + I+ P   L ++  GRLI ++    D+GWGVVVN      
Sbjct: 653  IREYYDLRKQIRQFTDDMQAVISHPNYCLPFIQPGRLISIKHKDVDFGWGVVVNYKQRKA 712

Query: 622  ---------------------VVKKPSAGVGTLPSRGGGY------------IVPVQLPL 648
                                 +   PS G  T      G             +VPV L  
Sbjct: 713  PKNSTEEPTPYQKYVVDVLLRIADGPSVGTKTFEDLPSGVRPPKEGENSRMEVVPVVLSC 772

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            + ++S IR+ +P DL   D+R  +  A+ E++ RFP G+  L+P+++M I+D     L+ 
Sbjct: 773  LQSISHIRIFLPKDLHSADSRNGVKKALDEVQKRFPDGIAVLDPIENMNIKDDNFKKLLR 832

Query: 709  QIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            +IE LE +L ++PL+ S    ++   +  K E   +I+  K K+ ++      DELK R 
Sbjct: 833  KIEVLESRLLSNPLHNSPRLPELYEQYSDKVETGSKIKATKKKISEAMSIMQLDELKCRK 892

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   QVA++ S F+  
Sbjct: 893  RVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVASVLSVFVFE 952

Query: 828  DKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
            +KS E   L R ELAKPL+++Q  AR +A++  E KL VN +EYV+S     LM+VIY W
Sbjct: 953  EKSKETPALTRDELAKPLKEIQAQARIVAKVSQESKLAVNEEEYVQS-FHWELMEVIYEW 1011

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            + G +F ++ +MTD++EGS+IR  RRL+E L Q+  A++ +G   LE KF  A   +RR 
Sbjct: 1012 ANGKSFVDICKMTDVYEGSLIRVFRRLEECLRQMAQASKVMGSEELESKFETALTKVRRD 1071

Query: 947  IMFSNSLYL 955
            I+ + SLYL
Sbjct: 1072 IVAAQSLYL 1080


>gi|154278623|ref|XP_001540125.1| ATP-dependent RNA helicase DOB1 [Ajellomyces capsulatus NAm1]
 gi|150413710|gb|EDN09093.1| ATP-dependent RNA helicase DOB1 [Ajellomyces capsulatus NAm1]
          Length = 1081

 Score =  880 bits (2275), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/973 (48%), Positives = 643/973 (66%), Gaps = 62/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYIPISE-HKPPQTP------ARTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG--------SGSGGSDIFKIVKMIM 325
             FRE+NF K  +T + +K G    N  A  +             S  G SDI+KIVKMIM
Sbjct: 353  VFREENFHKAMET-IAEKQGDDPANVMAKRKGKGKDKKTNKGGESNKGPSDIYKIVKMIM 411

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVFSFS+RECE  A+ MSK+ FN + EK+ V +VF +A++ L++ED+ LP I+
Sbjct: 412  LKNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKEMVSKVFNSAIEMLSDEDKELPQIK 471

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 472  HILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVR 531

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S 
Sbjct: 532  KFDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSA 591

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + +++++LE E A +    E
Sbjct: 592  FYLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNAASVAGLERELAELENEYAVMTIPDE 649

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK- 624
              + EY++L+ +IA     + S I+ P   + Y+  GRL++++    D+GWG VV+  K 
Sbjct: 650  GTIREYYELRQNIATYTSDMRSVISLPNYCVRYIQPGRLVQIQYMDYDFGWGAVVSCQKR 709

Query: 625  KPS----------------------AGVGTLPSRGGGY------------------IVPV 644
            KP                       A   + P+R G                    ++PV
Sbjct: 710  KPPRNAPNEEYPPHESFIVDVLLQVAEGSSSPTRAGQQPLPPGIRPSQPEGKSKLEVIPV 769

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             L  + T+S +R+ +P DL+P+ AR  +   + E++ RFP G+P L+P++DM I+D    
Sbjct: 770  LLSCLKTISHLRIRLPQDLKPISARSEVKKHIVEIQRRFPDGIPLLDPIEDMGIKDDSFR 829

Query: 705  DLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
             L+ +IE LE +L ++PL+ S    ++   +  K E+  +I+  K K+ ++      DEL
Sbjct: 830  KLLRKIEVLESRLMSNPLHNSPRLPELYDQYAAKTELGSKIKATKKKIAEAMSIIQLDEL 889

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            K R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S 
Sbjct: 890  KCRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSV 949

Query: 824  FIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+V
Sbjct: 950  FVFEESSKETPPISKEELAKPLRDIQAQARIIAKVSQESKLAVNEDEYVKG-FRWELMEV 1008

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            IY W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E 
Sbjct: 1009 IYEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEM 1068

Query: 943  LRRGIMFSNSLYL 955
            ++R I+ + SLYL
Sbjct: 1069 VKRDIVAAQSLYL 1081


>gi|451855147|gb|EMD68439.1| hypothetical protein COCSADRAFT_178265 [Cochliobolus sativus ND90Pr]
          Length = 1060

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/966 (48%), Positives = 639/966 (66%), Gaps = 55/966 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y    D         P    E A+T+ F LDPFQ+VS+A ++RNES
Sbjct: 106  LSHQVRHQVALPPDY----DYVPISEHKPPT---EPARTWPFALDPFQQVSIASIQRNES 158

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 159  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFMAEFGDVGLMTGDV 218

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDE+HY++D+ RGVVWEE+II LP  
Sbjct: 219  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEVHYLRDKSRGVVWEETIILLPDK 278

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ N+ QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 279  VRYVFLSATIPNSMQFAEWITKTHSQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 338

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA--SGRMAKGGSGSGG----SDIFKIVKMIMER 327
             FRE+NF K   + +  K G   ++  A   G+     + +GG    +DI+KIVKMIM +
Sbjct: 339  MFREENFQKAMSS-IADKAGTDAKDFMAKRKGKGKDKKTNTGGNREQTDIYKIVKMIMVK 397

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+RECE +A++MS L FN + EK  V +VF +A++ L+EEDR LP I+ +
Sbjct: 398  SYNPVIVFSFSKRECENYALAMSSLAFNDESEKAMVTKVFNSAIEMLSEEDRQLPQIQNI 457

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RG+ VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 458  LPLLRRGVGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 517

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S R++   E+IQMSGRAGRRG DDRGI I+M+DEQME    K++V G+   L S F 
Sbjct: 518  DGVSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMIDEQMEPAVAKEIVRGQQDNLNSAFH 577

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F+QFQ    + ++ K++ +LE+E  +     EA 
Sbjct: 578  LGYNMILNLM-RVEG-ISPEFMLERCFYQFQSTAGVSNLEKQLEELEQEKLNTTIIDEAA 635

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
            V +Y+ L+  +    K +   I  P   L +L  GRL+KV     D+GWG VV    + +
Sbjct: 636  VKDYYNLRQQLDTHTKDMRDVIMHPNYCLPFLQGGRLVKVSYKDHDFGWGAVVAFAPRKA 695

Query: 628  AGVGTLP-------------------------------------SRGGGYIVPVQLPLIS 650
                 LP                                      +G   +VPV L  I 
Sbjct: 696  NKGEVLPPQESYIVDVLLIVGSDNKFAPVVNDGLPPGVRPPAPGDKGKMEVVPVVLNCIE 755

Query: 651  TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
            ++  +R+ +P DL+  + R ++  A+ E+E RFP G+  L+P+++M I+D     L+ +I
Sbjct: 756  SIGHLRVFLPNDLKSTEQRNNVRKALNEVEKRFPDGIAILDPIENMNIKDESFKRLLRKI 815

Query: 711  EELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
            E LE +L ++PL+ S    ++   + +K  +  +I+  K ++ ++      DELK+R RV
Sbjct: 816  EVLESRLLSNPLHNSPRLPELYSQYAKKIAIGEKIKNTKKEIANALSVIQLDELKSRKRV 875

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            L++LG ID   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q AA  SCFI  +K
Sbjct: 876  LRRLGFIDDADVVQLKARVACEISTGDELVLSELLFNRFFNELTPEQCAACLSCFIFEEK 935

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            + E   L+ ELAKP +++Q+ AR IA++  E KL +N +EY++S  +  LM+V++ WSKG
Sbjct: 936  TQEVPALKEELAKPYREIQQQARVIAKMSQESKLTLNEEEYLKS-FKYELMEVVFAWSKG 994

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            ATF+E+ +MTD++EGS+IR  RRL+E L Q+  AA+ +G   LE+KF AA E +RR ++ 
Sbjct: 995  ATFSEICKMTDVYEGSLIRLFRRLEELLRQIAQAAKVMGSEELEQKFTAALELVRRDLVA 1054

Query: 950  SNSLYL 955
            + SLYL
Sbjct: 1055 AQSLYL 1060


>gi|255720086|ref|XP_002556323.1| KLTH0H10406p [Lachancea thermotolerans]
 gi|238942289|emb|CAR30461.1| KLTH0H10406p [Lachancea thermotolerans CBS 6340]
          Length = 1075

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/932 (48%), Positives = 632/932 (67%), Gaps = 50/932 (5%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+TY F LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+K
Sbjct: 148  ARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSMRNKQRVIYTSPIK 207

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYREL  +F DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWV+FD
Sbjct: 208  ALSNQKYRELLADFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFD 267

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HYM+D+ERGVVWEE+II LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYTDFR
Sbjct: 268  EVHYMRDKERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTDFR 327

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ---KIGGRRENGKASGRMA 306
            PTPLQHY+FP  G G++LVVDEK  FRE+NF K   +   Q     G     GK  G+  
Sbjct: 328  PTPLQHYLFPAHGDGIHLVVDEKSTFREENFQKAMASISNQVGDNPGSTNSRGK-KGQTY 386

Query: 307  KGGSGSGGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
            KGG+  G S  DI+KIV+MI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+++EK+ + 
Sbjct: 387  KGGASKGDSKGDIYKIVRMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSEDEKEALT 446

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            ++F NA++ L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFA
Sbjct: 447  KIFTNAIELLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFA 506

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETF++GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE
Sbjct: 507  TETFSIGLNMPAKTVVFTSVRKWDGKQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDE 566

Query: 485  QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            +ME    K MV G+   L S F L Y  ILNLM R EG  + E ++++SF QFQ   ++P
Sbjct: 567  KMEPQVAKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNATSVP 624

Query: 545  DIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRL 604
             + KK+++L  ++ S+    E  + +Y++++  +    + +   +T P  VL +L  GRL
Sbjct: 625  LMEKKLTELSAKSESMVIEDEQNIKDYYEIQKTLDGYSEDIRQIVTHPSNVLSFLQPGRL 684

Query: 605  IKVREGGTDWGWGVVVNVVKK------------------------------------PSA 628
            I+V+ G  ++ W  VV+  K+                                    P  
Sbjct: 685  IEVQVGNANYCWAAVVDCTKRTSKLSAVYSDHESWIVKVVVNTMYVDAPLNLIKPFNPVF 744

Query: 629  GVGTLPSRGG----GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
              G  P+  G      I+P+ L  I ++  +RL +P D+     + ++  +++E+  RF 
Sbjct: 745  PEGIRPASVGEKSVSTIIPITLNSIKSVGNLRLHMPKDILAGSQQVAVGKSIKEVRRRFS 804

Query: 685  QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHE 743
              +P ++P+K+MKIED +   L+ + E L+ +  ++PL+ S + ++  + +  K  +N E
Sbjct: 805  DKVPVMDPIKNMKIEDEDFQKLLQKSEVLKSRQSSNPLSGSVRLDDLYQKYNEKVSINSE 864

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I+QLK K++++Q     D+L+ R RVL++L     + +++LKGR AC I +GDELL+TEL
Sbjct: 865  IRQLKKKIQEAQAVTQLDDLRRRKRVLRRLDFCTPNDIIELKGRVACEISSGDELLLTEL 924

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +FNG FNDL   Q AAL SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+
Sbjct: 925  IFNGNFNDLTPEQAAALLSCFAFQERCKEAPRLKPELAEPLKNMREVAAKIAKIVKDSKI 984

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
            E+   +YVES  R  LM+V+Y W KGATF ++ +MTD++EGS+IR  +RL+E + +L   
Sbjct: 985  EIVEKDYVES-FRHELMEVVYEWCKGATFTQICKMTDVYEGSLIRMFKRLEELIKELVEV 1043

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  +G   L +K  AA   + R I+ + SLYL
Sbjct: 1044 SNTIGNSMLREKMEAALNLIHRDIVSAGSLYL 1075


>gi|261206458|ref|XP_002627966.1| ATP-dependent RNA helicase DOB1 [Ajellomyces dermatitidis SLH14081]
 gi|239593025|gb|EEQ75606.1| ATP-dependent RNA helicase DOB1 [Ajellomyces dermatitidis SLH14081]
 gi|327350333|gb|EGE79190.1| ATP-dependent RNA helicase DOB1 [Ajellomyces dermatitidis ATCC 18188]
          Length = 1081

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/973 (48%), Positives = 642/973 (65%), Gaps = 62/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYVPISE-HKPPETP------ARTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA--------SGRMAKGGSGSGGSDIFKIVKMIM 325
             FRE+NF K  +T + +K G    N  A              G    G SDI+KIVKMIM
Sbjct: 353  VFREENFHKAMET-IAEKQGDDPANAMAKRKGKGKDKKTNKGGDGNKGPSDIYKIVKMIM 411

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVFSFS+RECE  A+ MSK+ FN + EK+ V +VF +A++ L++ED+ LP I+
Sbjct: 412  LKNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKEMVSKVFNSAIEMLSDEDKELPQIK 471

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 472  HILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVR 531

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S 
Sbjct: 532  KFDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSA 591

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  +LNL+ R EG  + E +++  F+QFQ   ++  + +++++LE+E A +  + E
Sbjct: 592  FYLGYNMVLNLL-RVEG-ISPEFMLERCFYQFQNAASVSGLERELAELEKEYAGMVIADE 649

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK- 624
              + EY+ L+ +IA     + + I+ P     Y+  GRL++++    D+GWG VVN  K 
Sbjct: 650  GTIREYYDLRQNIATYTSDMRTVISLPNYCARYMQPGRLVQIQYKDHDFGWGAVVNSQKR 709

Query: 625  KP-------------------------------SAGVGTL-----PSRGGGY----IVPV 644
            KP                                AG   L     PSR GG     +VPV
Sbjct: 710  KPPRNAPNEEYPPHESFILDVLLQVAEDSSSPTKAGQNPLPPGIGPSRPGGKFKVEVVPV 769

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             +  + ++S IR+ +P DL+P+ AR      + E++ RFP G+P L+P++DM I D    
Sbjct: 770  LIGCLKSISHIRIRLPQDLKPISARNEANKHIVEIQRRFPDGVPLLDPIEDMGIRDDSFK 829

Query: 705  DLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
             L+ +IE LE +L ++PL+ S    ++   +  K E+  +I+  K K+ ++      DEL
Sbjct: 830  KLLRKIEVLESRLISNPLHNSPRLPELYDQYAAKTELGSKIKATKKKITEAMSIIQLDEL 889

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            K R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S 
Sbjct: 890  KCRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSV 949

Query: 824  FIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+V
Sbjct: 950  FVFEESSKETPPISKEELAKPLRDIQAQARIIAKVSQESKLAVNEDEYVKG-FRWELMEV 1008

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            IY W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E 
Sbjct: 1009 IYEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEM 1068

Query: 943  LRRGIMFSNSLYL 955
            ++R I+ + SLYL
Sbjct: 1069 VKRDIVAAQSLYL 1081


>gi|239610801|gb|EEQ87788.1| ATP-dependent RNA helicase DOB1 [Ajellomyces dermatitidis ER-3]
          Length = 1081

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/973 (48%), Positives = 642/973 (65%), Gaps = 62/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYVPISE-HKPPETP------ARTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA--------SGRMAKGGSGSGGSDIFKIVKMIM 325
             FRE+NF K  +T + +K G    N  A              G    G SDI+KIVKMIM
Sbjct: 353  VFREENFHKAMET-IAEKQGDDPANAMAKRKGKGKDKKTNKGGDGNKGPSDIYKIVKMIM 411

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVFSFS+RECE  A+ MSK+ FN + EK+ V +VF +A++ L++ED+ LP I+
Sbjct: 412  LKNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKEMVSKVFNSAIEMLSDEDKELPQIK 471

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 472  HILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVR 531

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S 
Sbjct: 532  KFDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSA 591

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  +LNL+ R EG  + E +++  F+QFQ   ++  + +++++LE+E A +  + E
Sbjct: 592  FYLGYNMVLNLL-RVEG-ISPEFMLERCFYQFQNAASVSGLERELAELEKEYAGMVIADE 649

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK- 624
              + EY+ L+ +IA     + + I+ P     Y+  GRL++++    D+GWG VVN  K 
Sbjct: 650  GTIREYYDLRQNIATYTSDMRTVISLPNYCSRYMQPGRLVQIQYKDHDFGWGAVVNSQKR 709

Query: 625  KPS-------------------------------AGVGTL-----PSRGGGY----IVPV 644
            KP                                AG   L     PSR GG     +VPV
Sbjct: 710  KPPRNAPNEEYPPHESFILDVLLQVAEDSSSPTRAGQNPLPPGIGPSRPGGKFKVEVVPV 769

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             +  + ++S IR+ +P DL+P+ AR      + E++ RFP G+P L+P++DM I D    
Sbjct: 770  LIGCLKSISHIRIRLPQDLKPISARNEANKHIVEIQRRFPDGVPLLDPIEDMGIRDDSFK 829

Query: 705  DLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
             L+ +IE LE +L ++PL+ S    ++   +  K E+  +I+  K K+ ++      DEL
Sbjct: 830  KLLRKIEVLESRLISNPLHNSPRLPELYDQYAAKTELGSKIKATKKKITEAMSIIQLDEL 889

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            K R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S 
Sbjct: 890  KCRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSV 949

Query: 824  FIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+V
Sbjct: 950  FVFEESSKETPPISKEELAKPLRDIQAQARIIAKVSQESKLAVNEDEYVKG-FRWELMEV 1008

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            IY W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E 
Sbjct: 1009 IYEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEM 1068

Query: 943  LRRGIMFSNSLYL 955
            ++R I+ + SLYL
Sbjct: 1069 VKRDIVAAQSLYL 1081


>gi|225560526|gb|EEH08807.1| ATP-dependent RNA helicase DOB1 [Ajellomyces capsulatus G186AR]
          Length = 1081

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/973 (48%), Positives = 642/973 (65%), Gaps = 62/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYIPISE-HKPPETP------ARTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG--------SGSGGSDIFKIVKMIM 325
             FRE+NF K  +T + +K G    N  A  +             S  G SDI+KIVKMIM
Sbjct: 353  VFREENFHKAMET-IAEKQGDDPANVMAKRKGKGKDKKTNKGGESNKGPSDIYKIVKMIM 411

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVFSFS+RECE  A+ MSK+ FN + EK+ V +VF +A++ L++ED+ LP I+
Sbjct: 412  LKNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKEMVSKVFNSAIEMLSDEDKELPQIK 471

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 472  HILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVR 531

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S 
Sbjct: 532  KFDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSA 591

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + +++++LE E A +    E
Sbjct: 592  FYLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNAASVVGLERELAELENEYAVMTIPDE 649

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK- 624
              + EY++L+ +IA     + S I+ P   + Y+  GRL++++    D+GWG VV+  K 
Sbjct: 650  GTIREYYELRQNIATYTSDMRSVISLPNYCVRYIQPGRLVQIQYMDYDFGWGAVVSCQKR 709

Query: 625  KPS----------------------AGVGTLPSRGGGY------------------IVPV 644
            KP                       A   + P+R G                    +VPV
Sbjct: 710  KPPRNAPNEEYPPHESFIVDVLLQVAEGSSSPTRAGQQPLPPGIRPSQPEGKSKLEVVPV 769

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             L  + T+S +R+ +P DL+P  AR  +   + E++ RFP G+P L+P++DM I+D    
Sbjct: 770  LLSCLKTISHLRIRLPQDLKPTGARSEVKKHIVEIQRRFPDGIPLLDPIEDMGIKDDSFR 829

Query: 705  DLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
             L+ +IE LE +L ++PL+ S    ++   +  K E+  +I+  K K+ ++      DEL
Sbjct: 830  KLLRKIEVLESRLMSNPLHNSPRLPELYDQYAAKTELGSKIKTTKKKIAEAMSIIQLDEL 889

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            K R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S 
Sbjct: 890  KCRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSV 949

Query: 824  FIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+V
Sbjct: 950  FVFEESSKETPPISKEELAKPLRDIQAQARIIAKVSQESKLAVNEDEYVKG-FRWELMEV 1008

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            IY W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E 
Sbjct: 1009 IYEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEM 1068

Query: 943  LRRGIMFSNSLYL 955
            ++R I+ + SLYL
Sbjct: 1069 VKRDIVAAQSLYL 1081


>gi|452004177|gb|EMD96633.1| hypothetical protein COCHEDRAFT_1123125 [Cochliobolus heterostrophus
            C5]
          Length = 1060

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/965 (48%), Positives = 636/965 (65%), Gaps = 53/965 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y    D         P    E A+T+ F LDPFQ+VS+A ++RNES
Sbjct: 106  LSHQVRHQVALPPDY----DYVPISEHKPPT---EPARTWPFALDPFQQVSIASIQRNES 158

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 159  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFMAEFGDVGLMTGDV 218

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDE+HY++D+ RGVVWEE+II LP  
Sbjct: 219  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEVHYLRDKSRGVVWEETIILLPDK 278

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ N+ QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 279  VRYVFLSATIPNSMQFAEWITKTHSQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 338

Query: 274  QFREDNFVKLQDTFL-KQKIGGRRENGKASGRMAKGGSGSGG----SDIFKIVKMIMERK 328
             FRE+NF K   +   K     +    K  G+     + +GG    +DI+KIVKMIM + 
Sbjct: 339  VFREENFQKAMSSIADKAGTAAKDFMAKRKGKGKDKKTNTGGNREQTDIYKIVKMIMVKS 398

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + PVIVFSFS+RECE +A++MS L FN + EK  V +VF +A++ L+EEDR LP I+ +L
Sbjct: 399  YNPVIVFSFSKRECENYALAMSSLAFNDESEKAMVTKVFNSAIEMLSEEDRQLPQIQNIL 458

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RG+ VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+D
Sbjct: 459  PLLRRGVGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFD 518

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G S R++   E+IQMSGRAGRRG DDRGI I+M+DEQME    K++V G+   L S F L
Sbjct: 519  GVSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMIDEQMEPAVAKEIVRGQQDNLNSAFHL 578

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNLM R EG  + E +++  F+QFQ    + ++ K++ +LE+E  +     EA V
Sbjct: 579  GYNMILNLM-RVEG-ISPEFMLERCFYQFQSTAGVSNLEKQLEELEQEKLNTTIIDEAAV 636

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA 628
             +Y+ L+  +    K +   I  P   L +L  GRL+KV     D+GWG VV    + + 
Sbjct: 637  KDYYNLRQQLDTHTKDMRDVIIHPNYCLPFLQGGRLVKVSYKDHDFGWGAVVAFAPRKAN 696

Query: 629  GVGTLP-------------------------------------SRGGGYIVPVQLPLIST 651
                LP                                      +G   +VPV L  I +
Sbjct: 697  KGEVLPPQESYIVDVLLIVGSDNKFAPVVNDGLPPGVRPPAPGDKGKMEVVPVVLNCIES 756

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            +  +R+ +P DL+  + R ++  A+ E++ RFP G+  L+P+++M I+D     L+ +IE
Sbjct: 757  IGHLRVFLPNDLKSTEQRNNVRKALNEVKKRFPDGIAILDPIENMNIKDESFKRLLRKIE 816

Query: 712  ELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             LE +L ++PL+ S    ++   + +K  +  +I+  K ++ ++      DELK+R RVL
Sbjct: 817  VLESRLLSNPLHNSPRLPELYSQYAKKIAIGEKIKNTKKEIANALSVIQLDELKSRKRVL 876

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            ++LG ID   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q AA  SCFI  +K+
Sbjct: 877  RRLGFIDDADVVQLKARVACEISTGDELVLSELLFNRFFNELSPEQCAACLSCFIFEEKT 936

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
             E   L+ ELAKP +++Q+ AR IA++  E KL +N +EY++S  +  LM+V++ WSKGA
Sbjct: 937  QEVPALKEELAKPYREIQQQARVIAKMSQESKLTLNEEEYLKS-FKYELMEVVFAWSKGA 995

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            TF+E+ +MTD++EGS+IR  RRL+E L Q+  AA+ +G   LE+KF AA E +RR ++ +
Sbjct: 996  TFSEICKMTDVYEGSLIRLFRRLEELLRQIAQAAKVMGSEELEQKFTAALELVRRDLVAA 1055

Query: 951  NSLYL 955
             SLYL
Sbjct: 1056 QSLYL 1060


>gi|240280087|gb|EER43591.1| ATP-dependent RNA helicase DOB1 [Ajellomyces capsulatus H143]
 gi|325088808|gb|EGC42118.1| ATP-dependent RNA helicase DOB1 [Ajellomyces capsulatus H88]
          Length = 1081

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 467/973 (47%), Positives = 642/973 (65%), Gaps = 62/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYIPISE-HKPPEIP------ARTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG--------SGSGGSDIFKIVKMIM 325
             FRE+NF K  +T + +K G    N  A  +             S  G SDI+KIVKMI+
Sbjct: 353  VFREENFHKAMET-IAEKQGDDPANVMAKRKGKGKDKKTNKGGESNKGPSDIYKIVKMII 411

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             + + PVIVFSFS+RECE  A+ MSK+ FN + EK+ V +VF +A++ L++ED+ LP I+
Sbjct: 412  LKNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKEMVSKVFNSAIEMLSDEDKELPQIK 471

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+
Sbjct: 472  HILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVR 531

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            K+DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S 
Sbjct: 532  KFDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSA 591

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + +++++LE E A +    E
Sbjct: 592  FYLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNAASVVGLERELAELENEYAVMTIPDE 649

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK 625
              + EY++L+ +IA     + S I+ P   + Y+  GRL++++    D+GWG VV+  K+
Sbjct: 650  GTIREYYELRQNIATYTSDMRSVISLPNYCVRYIQPGRLVQIQYMDYDFGWGAVVSCQKR 709

Query: 626  PS-----------------------AGVGTLPSRGGGY------------------IVPV 644
             S                       A   + P+R G                    +VPV
Sbjct: 710  KSPRNAPNEEYPPHESFIVDVLLQVAEGSSSPTRAGQQPLPPGIRPSQPEGKSKLEVVPV 769

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             L  + T+S +R+ +P DL+P  AR  +   + E++ RFP G+P L+P++DM I+D    
Sbjct: 770  LLSCLKTISHLRIRLPQDLKPTSARSEVKKHIVEIQRRFPDGIPLLDPIEDMGIKDDSFR 829

Query: 705  DLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
             L+ +IE LE +L ++PL+ S    ++   +  K E+  +I+  K K+ ++      DEL
Sbjct: 830  KLLRKIEVLESRLMSNPLHNSPRLPELYDQYAAKTELGSKIKTTKKKIAEAMSIIQLDEL 889

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            K R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S 
Sbjct: 890  KCRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSV 949

Query: 824  FIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+V
Sbjct: 950  FVFEESSKETPPISKEELAKPLRDIQAQARVIAKVSQESKLAVNEDEYVKG-FRWELMEV 1008

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            IY W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E 
Sbjct: 1009 IYEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEM 1068

Query: 943  LRRGIMFSNSLYL 955
            ++R I+ + SLYL
Sbjct: 1069 VKRDIVAAQSLYL 1081


>gi|348667405|gb|EGZ07230.1| hypothetical protein PHYSODRAFT_528925 [Phytophthora sojae]
          Length = 1056

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/988 (47%), Positives = 642/988 (64%), Gaps = 92/988 (9%)

Query: 30   KQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLE 89
            +Q+NL    V+    P  Y +T          NP      AKTY F LDPFQ+ +V  +E
Sbjct: 99   QQKNLISFSVY----PPDYEMTPTAG--AAAENP------AKTYPFTLDPFQQQAVDYIE 146

Query: 90   RNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLM 149
              ESVLVSAHTSAGKTAVAEYAIA + RDKQRVIYTSP+KALSNQKYR+L +EF DVGLM
Sbjct: 147  AGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLM 206

Query: 150  TGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIF 209
            TGD+T++P+A+CL+MTTEILR MLYRGSE+++EVAWVI+DEIHYM+D+ERGVVWEESII 
Sbjct: 207  TGDITINPSATCLIMTTEILRSMLYRGSEIMREVAWVIYDEIHYMRDKERGVVWEESIIL 266

Query: 210  LPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVV 269
            LP  ++ VFLSAT+ N+ +FA WICH+H QPCHVVYTD+RPTPLQHY+FP GG+GL+LVV
Sbjct: 267  LPHKVRFVFLSATIPNSKEFAGWICHIHHQPCHVVYTDYRPTPLQHYIFPAGGNGLHLVV 326

Query: 270  DEKEQFREDNFVKLQDTF------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKM 323
            DEK +FREDNF K   T          ++     N K             G+D+F+IVK+
Sbjct: 327  DEKGKFREDNFQKAIATLSASVDDAAAELASYGSNTKRRKAQKSNPKKKVGTDVFRIVKL 386

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            IMER++ PVI+FSFS+RECE +A+ MSKLDFNT+EEK +V+Q+F+NA+D L+++DR LP 
Sbjct: 387  IMERQYDPVIIFSFSKRECESYALLMSKLDFNTEEEKQSVDQLFKNAMDSLSDDDRALPQ 446

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            ++ +LPLL+RGI +HH GLLP++KE++E+LF EGL+K LFATETF+MGLNMPAKTVVFT 
Sbjct: 447  VDSILPLLRRGIGIHHGGLLPILKEVIEILFGEGLLKCLFATETFSMGLNMPAKTVVFTN 506

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
             +K+DG   R+I +GEYIQMSGRAGRR  D RGI I M+ EQME    K ++ G+  PL 
Sbjct: 507  CRKYDGKDFRWITAGEYIQMSGRAGRRSLDARGIVIQMLSEQMEPQVAKGILYGQADPLF 566

Query: 504  STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
            STF L Y  +LNLM   +     E++IK SFHQFQ E+A P + + + + +EE   +   
Sbjct: 567  STFHLGYNMLLNLMRVEDAD--PEYMIKQSFHQFQNEQAAPALEEALERAKEEKDQIVIK 624

Query: 564  GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-------WGW 616
             E EVA+Y+ L   + +L+++ ++   +P+ V+ +L  GRL+K+    +D       W W
Sbjct: 625  NEEEVAQYYYLSRSLVRLKEEFLAIRNKPDYVVRFLNGGRLVKLYCPDSDDGTTKPKWDW 684

Query: 617  GVVVNVVKK---------------------------------PSAGVGTLP--------- 634
            GVVVN   K                                  S+    LP         
Sbjct: 685  GVVVNFTTKNASDSTSATPDTIVHVLLNCVANNGNAKSNDATNSSTASELPTPAPEGMMG 744

Query: 635  -SRGGGY---IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
             S    Y   I PV L ++  LS +R+ +P DLR L++RQ++  +V+E+  RFPQG+P L
Sbjct: 745  LSSSTTYEMKICPVPLEMLDLLSSLRVYIPKDLRTLESRQTVGKSVKEVLRRFPQGVPLL 804

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKS 749
            +P +DM I+D +   ++ +  E E KL +   + + D E +   +  K E   ++++L+ 
Sbjct: 805  DPREDMDIQDEQFARVIEKTVEAEKKLKSSAFHNAADKEARFALYNLKMESEAKMRELER 864

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            K+++S+    RD+L+ R RVL++L  +D +GV+Q KGR AC + T DELLVTE++FNG F
Sbjct: 865  KIKESKSLVLRDDLRRRRRVLRRLEFVDKEGVIQRKGRTACEVSTTDELLVTEMIFNGQF 924

Query: 810  NDLDHHQVAALASCFIPVD--KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
            NDL  +   AL SC I  +  K S++      L  P++QL+ESA++IA++  + K+ V+V
Sbjct: 925  NDLSVNDTVALLSCLINTEKKKDSDKPPQAESLEIPVRQLRESAQRIAKVMQDAKITVDV 984

Query: 868  DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
            DEY        L+DV+  W +GA F+++ +M+D FEG+IIR  RRL+E L QL  AA ++
Sbjct: 985  DEYA-GAFNTSLVDVVIAWCQGAKFSQICKMSDAFEGTIIRCLRRLEELLRQLTLAAHSI 1043

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G+               R I+F+ SLYL
Sbjct: 1044 GD---------------RDIVFAASLYL 1056


>gi|425781760|gb|EKV19706.1| ATP dependent RNA helicase (Dob1), putative [Penicillium digitatum
            PHI26]
 gi|425782939|gb|EKV20818.1| ATP dependent RNA helicase (Dob1), putative [Penicillium digitatum
            Pd1]
          Length = 1081

 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/962 (48%), Positives = 632/962 (65%), Gaps = 56/962 (5%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+VA+P  Y        H   ANP      AKT+ F LDPFQ+V+V+ ++R ESVLVSAH
Sbjct: 130  HQVAIPPNYPYVPISQ-HKPPANP------AKTWPFTLDPFQQVAVSSIQREESVLVSAH 182

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA + +  QRVIYTSP+KALSNQKYRE   EF DVGLMTGDVT++P A
Sbjct: 183  TSAGKTVVAEYAIAQSLKQNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDVTINPTA 242

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
            +CLVMTTEILR MLYRGSE+++EV WV+FDEIHYM+D  RGVVWEE+II LP  ++ VFL
Sbjct: 243  TCLVMTTEILRSMLYRGSEIMREVQWVVFDEIHYMRDLNRGVVWEETIILLPDKVRYVFL 302

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ NA QFAEWI  +H QPCHVVYT++RPTPLQ+Y FP GG G++LVVDEK  FRE+N
Sbjct: 303  SATIPNAMQFAEWIVKMHNQPCHVVYTNYRPTPLQNYFFPAGGEGIHLVVDEKGVFREEN 362

Query: 280  FVKLQDTFLKQKIGG-----RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
            F K       +K         +  GK   +    G   G SDIFKIV+MIM + + PVIV
Sbjct: 363  FQKAMSAIADKKGDDPADALAKRKGKGKDKQINKGGNKGPSDIFKIVRMIMLKNYNPVIV 422

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            FSFS+RECE  A+ MSKL FN   EK+ V +VF++A++ L+ EDR LP I+ +LPLL++G
Sbjct: 423  FSFSKRECEAGALQMSKLTFNDDSEKNMVSKVFESAIEMLSPEDRQLPQIQNILPLLQQG 482

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            I VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+DG S R+
Sbjct: 483  IGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGTSQRW 542

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            +   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F L Y  IL
Sbjct: 543  VTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAFHLGYNMIL 602

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
            NLM R EG  + E++++  F QFQ   ++  + K++  LEE+  ++  S E  + EY+ L
Sbjct: 603  NLM-RVEG-ISPEYMLERCFKQFQNTGSVSGLEKELESLEEKRTNMIISDEGTIREYYDL 660

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG----- 629
            +  +      +   IT P   L ++  GRLI V+    D+GWGVV+N  K+  A      
Sbjct: 661  RKQLDAFADDVQHVITHPNYSLTFIHPGRLIHVKYKDADFGWGVVINQKKRKQASNDTEK 720

Query: 630  ------------------------------VGTLPSRGG----GYIVPVQLPLISTLSKI 655
                                           G  P++ G      +VP+ L  I+ +S I
Sbjct: 721  LTPHQSYIVDVLMRTTEGSSIGTKSFQDLPPGVHPAKEGEPARSEVVPIVLSCITEISHI 780

Query: 656  RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
            R+ +P D+    +R  ++ +V E++ RFP G+P L+P+++M+I+D     L+ +IE LE 
Sbjct: 781  RIMLPKDITSPSSRNDVMKSVGEVKRRFPDGVPLLDPIENMQIKDESFKKLLRKIEVLES 840

Query: 716  KLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
            +L ++PL+ S    ++   +  K ++  +I+ +K ++ ++      DELK R RVL++ G
Sbjct: 841  RLLSNPLHNSPRLTELYEQYAEKVDLTVKIKAIKKQIAEAMSILQLDELKCRKRVLRRFG 900

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
             I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   Q+A++ SCF+  +K  E  
Sbjct: 901  FINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTAEQIASVMSCFVFEEKVKEAP 960

Query: 835  NL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             L + ELAKPL+ +Q  AR IA++  E K+ VN DEYV+S     LM+VIY W++G +FA
Sbjct: 961  ALAKDELAKPLKDIQSQARIIAKVSQESKMAVNEDEYVQS-FHWELMEVIYEWTQGKSFA 1019

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            ++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G  +LE KF  A   +RR I+ + SL
Sbjct: 1020 DICKMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEDLESKFEEALGKVRRDIVAAQSL 1079

Query: 954  YL 955
            YL
Sbjct: 1080 YL 1081


>gi|307188640|gb|EFN73345.1| Superkiller viralicidic activity 2-like 2 [Camponotus floridanus]
          Length = 961

 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/948 (48%), Positives = 621/948 (65%), Gaps = 93/948 (9%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           SC+HEVA+P        E            G+ AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 78  SCMHEVAIPPEQEYVPLEH---------KQGKPAKEYKFILDPFQKEAILCIENNQSVLV 128

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT VAEYAIA + +DKQRVIYT+P+KALSNQKYRE H+EFKDVGL+TGDVT++
Sbjct: 129 SAHTSAGKTVVAEYAIACSLKDKQRVIYTTPIKALSNQKYREFHEEFKDVGLVTGDVTIN 188

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 189 PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 248

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA QFAEW+ HLH QPCHVV TD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 249 VFLSATIPNARQFAEWVAHLHNQPCHVVSTDYRPTPLQHYIFPVGGDGIHLVVDETGQFK 308

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
           E+NF +       Q IG   + G   GR  KGG   + SG ++IFK+VKMIMER F PVI
Sbjct: 309 EENFNRAMACL--QNIGDAAK-GDTKGR--KGGLRATNSGQTNIFKMVKMIMERNFAPVI 363

Query: 334 VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
           +FSFS+++CE +AM M+KLD NT EEK  V++VF NA+D LN+ED+ LP +  +LPLL+R
Sbjct: 364 IFSFSKKDCEVYAMQMAKLDLNTLEEKKLVDEVFNNAIDVLNDEDKKLPQVTNLLPLLRR 423

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           GI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 424 GIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 483

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
           +I SGEYIQMSGRAGRRG DD+GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 484 WITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVIGKAIVQGKPDPINSAFHLTYNMV 543

Query: 514 LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           LNL+ R E +   E++++ SF QFQ +  +P +  KV +L     +++     E++ YH 
Sbjct: 544 LNLL-RVE-EINPEYMLERSFFQFQNQAGIPALYNKVKELYTTYNTVNVERYDEISSYHN 601

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK--------- 624
           ++  + +L  +  S +T+PE ++ +L  GRL  VR     + WG++VN  K         
Sbjct: 602 IREQLDRLSGEFRSFLTQPEYLVPFLQPGRL--VRNEFETFDWGIIVNFKKKNQKNPVKD 659

Query: 625 -------------KPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                        K S     +P R    G   +VPV   LIS +S +RL  P DLRP D
Sbjct: 660 KTIIIIDILLHISKDSKEGNPIPCREGEEGEMEVVPVSHNLISQISSLRLYYPKDLRPSD 719

Query: 668 ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
            R+S+L  ++                     ED  V  L  Q                  
Sbjct: 720 NRKSVLKTIR---------------------EDQNVNVLYEQ------------------ 740

Query: 728 ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
                 F  K E+  +++Q K + + ++     +ELK R RVL+++ +  +  +++LKGR
Sbjct: 741 ------FLHKEELAVQLKQSKEEFKQAKSILQMNELKCRKRVLRRMAYCTSADIIELKGR 794

Query: 788 AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
            AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  +KS+E      EL+ PL+Q+
Sbjct: 795 VACELNGADELLMTEMIFNGLFNALSVPQMVALISCFVCDEKSNEMPKSTEELSGPLRQM 854

Query: 848 QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
           Q+ AR+IA++  E  LE++ D YV+   +P+LMDVIY W KGATF ++ +MTDIFEGSII
Sbjct: 855 QDLARRIAKVSTEANLELDEDAYVDR-FKPYLMDVIYAWCKGATFLQICKMTDIFEGSII 913

Query: 908 RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           R  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 914 RCMRRLEEVLRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL 961


>gi|169773785|ref|XP_001821361.1| hypothetical protein AOR_1_1508144 [Aspergillus oryzae RIB40]
 gi|83769222|dbj|BAE59359.1| unnamed protein product [Aspergillus oryzae RIB40]
          Length = 1080

 Score =  877 bits (2266), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 468/969 (48%), Positives = 628/969 (64%), Gaps = 58/969 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+VS+A ++R ES
Sbjct: 123  LSHQIRHQVAIPPNYPYVPISE-HKPPENP------ARVWPFTLDPFQQVSIASIQREES 175

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 176  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 235

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D  RGVVWEE+II LP  
Sbjct: 236  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDATRGVVWEETIILLPDK 295

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTD+RPTPLQHY FP G  G++LVVDEK 
Sbjct: 296  VRYVFLSATIPNAMQFAEWIVKMHNQPCHVVYTDYRPTPLQHYFFPAGADGIHLVVDEKG 355

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG------SDIFKIVKMIMER 327
             FRE+NF K   T   +K G    +  A  +                SDI+KIVKMIM +
Sbjct: 356  VFREENFQKAMSTIADKK-GDDPADAMAKRKGKGKDKKLNKGKNKGPSDIYKIVKMIMIK 414

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+RECE  A+ MS L FN   EK+ V +VF +A++ L+EEDRNLP I+ +
Sbjct: 415  NYNPVIVFSFSKRECESGALQMSNLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQNI 474

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 475  LPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 534

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S R++   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F 
Sbjct: 535  DGFSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAFH 594

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F+QFQ    +  + K++++LEE+ A++  S E  
Sbjct: 595  LGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGVATLEKELAELEEKRANMTISDEGT 652

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN------ 621
            + EY+ L+  I Q    + + I+ P   L ++  GRLI ++    D+GWGVVVN      
Sbjct: 653  IREYYDLRKQIRQFTDDMQAVISHPNYCLPFIQPGRLISIKHKDVDFGWGVVVNYKQRKA 712

Query: 622  ---------------------VVKKPSAGVGTLPSRGGGY------------IVPVQLPL 648
                                 +   PS G  T      G             +VPV L  
Sbjct: 713  PKNSTEEPTPYQKYVVDVLLRIADGPSVGTKTFEDLPSGVRPPKEGENSRMEVVPVVLSC 772

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            + ++S IR+ +P DL   D+R  +  A+ E++ RFP G+  L+P+++M I+D     L+ 
Sbjct: 773  LQSISHIRIFLPKDLHSADSRNGVKKALDEVQKRFPDGIAVLDPIENMNIKDDNFKKLLR 832

Query: 709  QIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            +IE LE +L ++PL+ S    ++   +  K E   +I+  K K+ ++      DELK R 
Sbjct: 833  KIEVLESRLLSNPLHNSPRLPELYEQYSDKVETGSKIKATKKKISEAMSIMQLDELKCRK 892

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   QVA++ S F+  
Sbjct: 893  RVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVASVLSVFVFE 952

Query: 828  DKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
            +KS E   L R ELAKPL+++Q  AR +A++  E KL VN +EYV+S     LM+VIY W
Sbjct: 953  EKSKETPALTRDELAKPLKEIQAQARIVAKVSQESKLAVNEEEYVQS-FHWELMEVIYEW 1011

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            + G +F ++ +MTD++EGS+IR  RRL+E L Q+  A++ +G   LE KF  A   +RR 
Sbjct: 1012 ANGKSFVDICKMTDVYEGSLIRVFRRLEECLRQMAQASKVMGSEELESKFETALTKVRRD 1071

Query: 947  IMFSNSLYL 955
            I+ + SLYL
Sbjct: 1072 IVAAQSLYL 1080


>gi|330921549|ref|XP_003299467.1| hypothetical protein PTT_10466 [Pyrenophora teres f. teres 0-1]
 gi|311326842|gb|EFQ92436.1| hypothetical protein PTT_10466 [Pyrenophora teres f. teres 0-1]
          Length = 1053

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/966 (47%), Positives = 635/966 (65%), Gaps = 55/966 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y    D         P    E A+T+ F LDPFQ+VS+A ++RNES
Sbjct: 99   LSHQVRHQVALPPDY----DYVPINEHKPP---QEPARTWPFTLDPFQQVSIASIQRNES 151

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 152  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFMAEFGDVGLMTGDV 211

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDE+HY++D+ RGVVWEE+II LP  
Sbjct: 212  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEVHYLRDKARGVVWEETIILLPDK 271

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 272  VRYVFLSATIPNAMQFAEWITKTHSQPCHVVYTDFRPTPLQHYFFPAGAEGIHLVVDEKG 331

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA------SGRMAKGGSGSGGSDIFKIVKMIMER 327
             FRE+NF K   + +  K G   ++  A        +    G     +DI+KIVKMIM +
Sbjct: 332  VFREENFQKAMSS-IADKAGTDSKDFLAKRKGKGKDKKTNTGGNKDQTDIYKIVKMIMVK 390

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+RECE +A++MS L FN   EK  V +VF +A++ L+EEDR LP I+ +
Sbjct: 391  SYNPVIVFSFSKRECENYALAMSSLAFNDDSEKAMVTKVFNSAIEMLSEEDRQLPQIQHI 450

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 451  LPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 510

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG + R++   E+IQMSGRAGRRG DDRGI I+M++EQME    K++V G+   L S F 
Sbjct: 511  DGVAQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMINEQMEPAVAKEIVRGQQDNLNSAFH 570

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F QFQ    +  +  ++ +LE E A+ +   E  
Sbjct: 571  LGYNMILNLM-RVEG-ISPEFMLERCFFQFQSTAGVSHLEHQLEELEHEKANTNIVDEPP 628

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-- 625
            + EY+ L+  +    K +   I +P   L +L  GRL+K++    D+GWG VV    +  
Sbjct: 629  IKEYYNLRQQLDTHTKDMRDVIMQPTYCLQFLQGGRLVKIKYKDFDFGWGAVVAFTPRKG 688

Query: 626  ---------------------------PSAGVGTLP--------SRGGGYIVPVQLPLIS 650
                                       P+   G  P         +G   +VPV L  I 
Sbjct: 689  NKGEIFPPHESYIVDVLLPVASDTKFAPAVNDGLPPGVRPPTAGDKGKMEVVPVVLNCIE 748

Query: 651  TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
            ++  +R+ +P +L+  + R ++  A+ E++ RFP G+  L+P+++M I+D     L+ +I
Sbjct: 749  SIGHLRVFLPNELKSAEQRNNVRKALAEVKKRFPDGIAILDPIENMNIKDDSFKKLLRRI 808

Query: 711  EELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
            E LE +L  +PL+ S    ++   + +K  ++ +I+ ++ ++ ++      DELK+R RV
Sbjct: 809  EVLESRLLTNPLHNSPRLPELYSQYAQKIAISEKIKNVRKEIANALSVIQLDELKSRKRV 868

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            L++LG ID   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q AA  SCFI  +K
Sbjct: 869  LRRLGFIDEADVVQLKARVACEISTGDELVLSELLFNRFFNELTPEQCAACLSCFIFEEK 928

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            + E   L+ ELAKP +++Q+ AR IA++  E KL VN +EY++ T +  LM+V+Y WSKG
Sbjct: 929  TQEVPALKEELAKPYREIQQQARVIAKMSQESKLTVNEEEYLK-TFKYELMEVVYAWSKG 987

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            ATFA++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G   LE+KF A+ E +RR ++ 
Sbjct: 988  ATFAQICKMTDVYEGSLIRLFRRLEELLRQIAQAAKVMGSEELEQKFTASLELVRRDLVA 1047

Query: 950  SNSLYL 955
            + SLYL
Sbjct: 1048 AQSLYL 1053


>gi|295659474|ref|XP_002790295.1| ATP-dependent RNA helicase DOB1 [Paracoccidioides sp. 'lutzii' Pb01]
 gi|226281747|gb|EEH37313.1| ATP-dependent RNA helicase DOB1 [Paracoccidioides sp. 'lutzii' Pb01]
          Length = 1080

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 471/972 (48%), Positives = 640/972 (65%), Gaps = 61/972 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    +P      AKT+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYVPISE-HKPPESP------AKTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLIVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS-------GSGGSDIFKIVKMIME 326
             FRE+NF K  ++ + +K G    N  A  +               G SDIFKIV+MI+ 
Sbjct: 353  VFREENFHKAMES-IAEKQGEDPANPMAKRKGKGKDKKINKGEVSKGPSDIFKIVRMIVM 411

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSFS+RECE  A+ MSK+ FN + EKD V +VF +A++ L++ED+ LP I+ 
Sbjct: 412  KNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKDMVSKVFNSAIEMLSDEDKELPQIKH 471

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 472  ILPLLRLGIGVHHSGLLPILKETIEILFQEGLLKVLFATETFSIGLNMPAKTVVFTSVRK 531

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S F
Sbjct: 532  FDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSAF 591

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK-KVSKLEEEAASLDASGE 565
             L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K ++ +LE+E AS+  + E
Sbjct: 592  HLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVAGLEKAELVELEKEHASMVIADE 649

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV-K 624
              + EY++L+ +IA     + S IT P   L Y+  GRL++++    D+GWG VVN   +
Sbjct: 650  GTIREYYELRQNIATYTSDMQSVITLPNYCLRYMQVGRLVQIQYMDYDFGWGAVVNYQRR 709

Query: 625  KPSAGV-----------------------------------GTLPSRGGGY----IVPVQ 645
            KP                                       G  P++ GG     ++PV 
Sbjct: 710  KPPRNSPNEQYPPHENYVVDVLLPISEDSAFTTKTIEPLPPGIRPTQPGGKVRLEVIPVL 769

Query: 646  LPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVD 705
            L  I T+S IRL +P DL+    R  I   + E++ RFP G+P ++P++DM I D     
Sbjct: 770  LNCIKTISHIRLRLPQDLKQASTRNGIHKHIMEVQRRFPDGVPLIDPIEDMGIRDDSFKK 829

Query: 706  LVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK 764
            L+ +IE LE +L ++PL N  +  +    +  K E+  +I+  K K+ ++      DELK
Sbjct: 830  LLRKIEVLESRLLSNPLHNSPRLPDLYDQYAAKTELASKIKATKKKITEAMSIIQLDELK 889

Query: 765  NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
             R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S F
Sbjct: 890  CRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSVF 949

Query: 825  IPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVI 883
            +  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+VI
Sbjct: 950  VFEETSKETPPIAKEELAKPLRDIQAQARVIAKVSQESKLTVNEDEYVKG-FRWELMEVI 1008

Query: 884  YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
            Y W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E +
Sbjct: 1009 YEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEMV 1068

Query: 944  RRGIMFSNSLYL 955
            +R I+ + SLYL
Sbjct: 1069 KRDIVAAQSLYL 1080


>gi|396461637|ref|XP_003835430.1| similar to ATP-dependent RNA helicase DOB1 [Leptosphaeria maculans
            JN3]
 gi|312211981|emb|CBX92065.1| similar to ATP-dependent RNA helicase DOB1 [Leptosphaeria maculans
            JN3]
          Length = 1059

 Score =  875 bits (2262), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/973 (47%), Positives = 639/973 (65%), Gaps = 69/973 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+V++P  Y        H   A P      A+ + F LDPFQ+VS+A ++RNES
Sbjct: 105  LSHQVRHQVSLPPDYDYVPISE-HKAPAEP------ARVWPFTLDPFQQVSIASIQRNES 157

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 158  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFMAEFGDVGLMTGDV 217

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDE+HY++D+ RGVVWEE+II LP  
Sbjct: 218  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEVHYLRDKSRGVVWEETIILLPDK 277

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 278  VRYVFLSATIPNAMQFAEWITKTHSQPCHVVYTDFRPTPLQHYFFPAGADGIHLVVDEKG 337

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA------SGRMAKGGSGSGGSDIFKIVKMIMER 327
             FRE+NF K   + +  K G    +  A        +    G     +DI+KIVKMIM +
Sbjct: 338  VFREENFQKAMSS-IADKAGTEASDYLAKRKGKGKDKKTNKGGNKDQTDIYKIVKMIMMK 396

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+R+CE +A+SMS+L FN + EK  V +VF +A++ L+EEDR LP I+ +
Sbjct: 397  SYNPVIVFSFSKRDCENYALSMSQLAFNDESEKAMVSKVFSSAIEMLSEEDRQLPQIQHI 456

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 457  LPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 516

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S R++   E+IQMSGRAGRRG DDRGI I+M++EQME    K++V G+   L S F 
Sbjct: 517  DGVSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMINEQMEPAIAKEIVRGQQDNLNSAFH 576

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F QFQ    + ++ K++ +LE E A++  + EA 
Sbjct: 577  LGYNMILNLM-RVEG-ISPEFMLERCFFQFQNTAGVSNLEKELQELEAEKANIIITDEAT 634

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-- 625
            V +Y+ L+  +    + +   I  P   L++L +GRL+KV+    D+GWG VV    +  
Sbjct: 635  VKDYYNLRQQLDTHTQDMRDVIMHPTHCLHFLQAGRLVKVKFKDHDFGWGAVVAYTPRKA 694

Query: 626  ---------------------------PSAGVGTLP--------SRGGGYIVPVQLPLIS 650
                                       P AG G  P         +G   +VP+ L  I 
Sbjct: 695  NKGEVLPPQQSYVVDVLLAVASDTTFMPQAGDGLPPGVRPPAPGDKGKMEVVPILLSCIE 754

Query: 651  TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
            ++  +R+ +P +L+  + + ++  A+ E++ RFP G+  L+P+++M+I+D     L+ +I
Sbjct: 755  SIGHLRVFLPNELKSTEQKNNVRKALGEVKKRFPDGIAILDPIENMQIKDDSFKRLLRKI 814

Query: 711  EELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRD--------SQIQKFRDE 762
            E LE +L ++PL+     N  R     ++  H+I   +   +         S IQ   DE
Sbjct: 815  EVLESRLLSNPLH-----NSPRLPDLYSQYAHKIAIGEKIKKIKKDIANALSVIQ--LDE 867

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
            LK+R RVL+++G ID   VVQLK R AC I TGDEL+++EL+FN  FN+L   Q AA  S
Sbjct: 868  LKSRKRVLRRIGFIDDADVVQLKARVACEISTGDELVLSELLFNRFFNELTPEQCAACLS 927

Query: 823  CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            CFI  +K+++   L+ ELAKP +++Q+ AR IA+I  E KL+++ + Y++ T +  LM+V
Sbjct: 928  CFIFEEKTTDTPALKEELAKPYREIQQQARVIAKISQESKLQIDEEAYLK-TFKYELMEV 986

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            +Y WSKGA+FAE+ +MTD++EGS+IR  RRL+E L Q+  A++ +G   LE+KF AA + 
Sbjct: 987  VYAWSKGASFAEICKMTDVYEGSLIRLFRRLEELLRQIAQASKVMGSEELEQKFTAALDL 1046

Query: 943  LRRGIMFSNSLYL 955
            +RR ++ + SLYL
Sbjct: 1047 VRRDLVAAQSLYL 1059


>gi|255088573|ref|XP_002506209.1| predicted protein [Micromonas sp. RCC299]
 gi|226521480|gb|ACO67467.1| predicted protein [Micromonas sp. RCC299]
          Length = 1047

 Score =  874 bits (2258), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/1019 (46%), Positives = 635/1019 (62%), Gaps = 93/1019 (9%)

Query: 24   EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRV 83
            EE +   Q     SC H VAVP  +     +        P Y+GE AKTY F LD FQ  
Sbjct: 35   EEGAAAPQAPQRSSCRHSVAVPPDW-----QGDRAALDAPSYDGERAKTYPFVLDAFQET 89

Query: 84   SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
            SV+ LERNESVLV+AHTSAGKT VAEYAIAMAFRD QRV+YTSPLKALSNQK+REL +EF
Sbjct: 90   SVSVLERNESVLVAAHTSAGKTVVAEYAIAMAFRDNQRVVYTSPLKALSNQKFRELTEEF 149

Query: 144  KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
             DVGLMTGDV ++PNASC+VMTTE+LRGMLYRGS+V++EV W+IFDE+HYM+DRERGVVW
Sbjct: 150  GDVGLMTGDVCINPNASCIVMTTEVLRGMLYRGSDVVREVKWIIFDEVHYMRDRERGVVW 209

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EESIIF P   K VFLSAT+ NA +FAEWI HLH  PCHVVYTD+RPTPLQHY FP GG+
Sbjct: 210  EESIIFAPAGCKFVFLSATLPNAHEFAEWITHLHNHPCHVVYTDYRPTPLQHYGFPKGGN 269

Query: 264  GLYLVVDEKEQFREDNFVKLQDTF--LKQKIGGRRENGKASG------------------ 303
            G+ ++V+E+++F E N+ +L+     L Q    R+ + +                     
Sbjct: 270  GMVMIVNERKEFLEANYAELEAKIDALTQSAKKRKRDERVKADGGRGRGGGGRGGGGRGG 329

Query: 304  -------RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM----SKL 352
                   R    G  +   DI KI+K I  R   PVIVFSFSRR CE HA  +    ++L
Sbjct: 330  RWGRGGGRGGDSGEDASEVDIKKIMKTIRARDLYPVIVFSFSRRACETHANDLMTGKTQL 389

Query: 353  DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
            DF TQE+K+ + Q++ NA+ C+ EEDR L  ++ + P+L+RGI +HH GLLP+IKELVE+
Sbjct: 390  DFTTQEQKELIRQIYDNALLCMAEEDRELACVQKIFPMLERGIGIHHGGLLPIIKELVEI 449

Query: 413  LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
            LF E LVK LFATETFAMGLNMPA+T VFT V+K+DG   R +  GEY QM+GRAGRRGK
Sbjct: 450  LFGESLVKCLFATETFAMGLNMPARTCVFTEVEKFDGKEMRVLQPGEYTQMAGRAGRRGK 509

Query: 473  DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
            DDRG CI+M+D++++   L  M  G  + L+S F+L+YYSILNL+ RA G+  AE+VI+ 
Sbjct: 510  DDRGTCILMLDKKLDKEELVHMTCGTGSALMSEFKLTYYSILNLLRRASGEEDAEYVIQR 569

Query: 533  SFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRP 592
            SFHQFQ+ + +P    ++ ++  EA  +        AE  +L+         LM     P
Sbjct: 570  SFHQFQHTREVPRKKLELQEITAEADGIQLDMSDAKAELVRLQNAARDARTALMHHAVDP 629

Query: 593  ERVLY-YLGSGRLIKVREGGTDWGWGVVVNVVKKPS---------------------AGV 630
            E++    L  GRL++VR+G  +WGWG VV V   P+                     +GV
Sbjct: 630  EKLTRDVLKPGRLVRVRDGDDEWGWGAVVGVRDLPAEAMRVRRRAIDVLIHCGPGVDSGV 689

Query: 631  -----------GTLPSRGGGY-IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
                       G L  +G    I+PV L L+  +  + L++P DL    +R  + LA+ E
Sbjct: 690  LRPAKRILGRPGKLAEKGCTCEIIPVALRLVDAVGAMVLTLPRDLTDATSRAQVGLAINE 749

Query: 679  LESRFP-QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ------DENQI 731
            L  RF  + +P+L+   D++++  E  + + +    E +L AHPL  +       +E QI
Sbjct: 750  LHHRFQGKAVPELDLENDLRLDGDEFHESMGRWLRSESELRAHPLYAASTKEGGLNEKQI 809

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
              +++KA +    Q LK +++ +Q+ KFR+EL++RSRVL + G +D +G V  KGRAAC 
Sbjct: 810  ELYRKKASLMERAQDLKKEIKTTQLSKFREELRDRSRVLTRFGMLDEEGTVTHKGRAACE 869

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL----RMELAKPLQQL 847
            IDT DE+LVTELMFNG F  +DHH + AL S F+PV+K++E   L    +  L  P++QL
Sbjct: 870  IDTADEVLVTELMFNGCFVAMDHHALVALCSMFMPVEKTNEVYPLAGAAKEALEGPVKQL 929

Query: 848  QESAR-----------KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
            +E+A+           +    + E      V EYV+S  +  L+ ++Y WSKG  F  ++
Sbjct: 930  REAAKAIAEAEIDFGVRTQAAEGEDGRHEAVTEYVDS-FKDALVGMVYDWSKGTNFDTIM 988

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + TD+FEG+ +R+ARRLDE + +L  AA+AVG   L   F   +ESLR G++ + SLYL
Sbjct: 989  RGTDMFEGTFVRAARRLDELMMELHRAARAVGSAELADSFEKGAESLRHGVVSAASLYL 1047


>gi|301107962|ref|XP_002903063.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
 gi|262098181|gb|EEY56233.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
          Length = 1049

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/993 (46%), Positives = 645/993 (64%), Gaps = 83/993 (8%)

Query: 15   EDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYS 74
            E   +  TP E + K   N+  +   +  + S      D     T      N   AKTY 
Sbjct: 69   EGKRIDATPIEGNDKHSANVVSTGTQQKNLISFSVYPPDYDAQPTAGAAAKNP--AKTYP 126

Query: 75   FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
            F LDPFQ+ +V  +E  ESVLVSAHTSAGKTAVAEYAIA + RDKQRVIYTSP+KALSNQ
Sbjct: 127  FTLDPFQQQAVDYIESGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQ 186

Query: 135  KYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYM 194
            KYR+L +EF DVGLMTGD+T++P+A+CL+MTTEILR MLYRGSEV++EVAWVI+DEIHYM
Sbjct: 187  KYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYM 246

Query: 195  KDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQ 254
            +D+ERGVVWEESII LP  ++ VFLSAT+ N+ +FA WICH+H QPCHVVYTD+RPTPLQ
Sbjct: 247  RDKERGVVWEESIILLPHKVRFVFLSATIPNSKEFAGWICHIHHQPCHVVYTDYRPTPLQ 306

Query: 255  HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG- 313
            HY+FP GGSGL+LVVDEK +FREDNF K   T              A+  +A  GS +  
Sbjct: 307  HYLFPAGGSGLHLVVDEKGKFREDNFQKAIATL-------SASTDDAAAELASYGSNTKR 359

Query: 314  ------------GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
                        G+D+F+IVK+IMER++ PVI+FSFS+RECE +A+ MSKLDFNT+EEK 
Sbjct: 360  RKAQKSNPKKKVGTDVFRIVKLIMERQYDPVIIFSFSKRECEAYALLMSKLDFNTEEEKQ 419

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +V+Q+F+NA+D L+++DR LP ++ +LPLL+RGI +HH GLLP++KE++E+LF EGL+K 
Sbjct: 420  SVDQLFKNAMDSLSDDDRALPQVDSILPLLRRGIGIHHGGLLPILKEVIEILFGEGLLKC 479

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETF+MGLNMPAKTVVFT  +K+DG   R+I +GEYIQMSGRAGRR  D RGI I M
Sbjct: 480  LFATETFSMGLNMPAKTVVFTNCRKYDGKDFRWITAGEYIQMSGRAGRRSLDARGIVIQM 539

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            + EQME    K ++ G+  PL STF L Y  +LNLM   +     E++IK SFHQFQ E+
Sbjct: 540  LSEQMEPQVAKGILYGQADPLFSTFHLGYNMLLNLMRVEDAD--PEYMIKQSFHQFQNEQ 597

Query: 542  ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            A P + + + + +EE   +    E EVA+Y+ L   + +L+++ ++   +P+ V  +L  
Sbjct: 598  AAPALEEALERAKEEKDQIVIKNEEEVAQYYYLSRSLVRLKEEFLAIRNKPDHVTRFLNG 657

Query: 602  GRLIKVREGGTD-------WGWGVVVNVVKKPSAG------------------------- 629
            GRL+K+    +D       W WGV+VN   K ++                          
Sbjct: 658  GRLVKLYSPDSDDGTSKPKWDWGVIVNFTTKNASDSTCATPDTVVHVLLNCLNNSNVTSN 717

Query: 630  -------VGTLP----------SRGGGY---IVPVQLPLISTLSKIRLSVPPDLRPLDAR 669
                   V  LP          S    Y   I PV L ++  +S +R+ +P DLR L++R
Sbjct: 718  DATNGSTVAELPTPAPENMMGLSTSATYEMKICPVPLEMLDLISSLRVYIPKDLRTLESR 777

Query: 670  QSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-E 728
            Q++  +V+E+  RFPQG+P L+P +D+ I+D + + ++ +  + E +L + P + + D E
Sbjct: 778  QAVGKSVKEVLRRFPQGVPLLDPREDLDIQDEQFLRVIEKTVDAEKQLKSSPFHNAADKE 837

Query: 729  NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
             +   +  K E   ++++L+ K+++S+    RD+L+ R RVL++L  +D +GV+Q KGR 
Sbjct: 838  ARFALYNLKMESEAKMRELERKIKESKSLVLRDDLRRRRRVLRRLEFVDKEGVIQRKGRT 897

Query: 789  ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS--SEQINLRMELAKPLQQ 846
            AC + T DELLVTE++FNG FNDL  +   AL SC I  +K   S++      L  P++Q
Sbjct: 898  ACEVSTTDELLVTEMIFNGQFNDLSVNDAVALLSCLINTEKKKESDKPPQAESLEVPVRQ 957

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            L+E+A++IA++  + K+ ++VDEY        L+DV+  W +GA F+++ +M+D FEG+I
Sbjct: 958  LRETAQRIAKVMQDAKMTIDVDEYA-GAFNTNLVDVVIAWCQGAKFSQICKMSDAFEGTI 1016

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            IR  RRL+E L QL  AA ++G    +  FAA+
Sbjct: 1017 IRCLRRLEELLRQLTLAAHSIGA---DMSFAAS 1046


>gi|115398163|ref|XP_001214673.1| ATP-dependent RNA helicase DOB1 [Aspergillus terreus NIH2624]
 gi|114192864|gb|EAU34564.1| ATP-dependent RNA helicase DOB1 [Aspergillus terreus NIH2624]
          Length = 1080

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/990 (47%), Positives = 643/990 (64%), Gaps = 60/990 (6%)

Query: 15   EDLHVTGTPEEESTKKQRN--LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKT 72
            ++  V G+   ++TK   +  L     H+V++P  Y        H    +P      A+ 
Sbjct: 102  QEREVAGSAGLQATKDSGSVVLQHQVRHQVSLPPNYPYVPISQ-HQPPKDP------ARV 154

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            + F LDPFQ+V+V+ ++R ESVLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALS
Sbjct: 155  WPFTLDPFQQVAVSSIQREESVLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALS 214

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQKYRE   EF DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIH
Sbjct: 215  NQKYREFAAEFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIH 274

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            YM+D  RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTP
Sbjct: 275  YMRDATRGVVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTP 334

Query: 253  LQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS-- 310
            LQHY FP G  G++L+VDEK  FRE+NF K   +   +K G    +  A  +        
Sbjct: 335  LQHYFFPAGAEGIHLIVDEKGNFREENFQKAMSSIADKK-GDDPADALAKRKGKGKDKKI 393

Query: 311  ----GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
                   G+DI+KIVKM+M +   PVIVFSFS+RECE  A+ MS L FN   EK+ V +V
Sbjct: 394  NKGGNESGNDIYKIVKMVMIKNLNPVIVFSFSKRECESCALKMSTLAFNDDSEKEMVSKV 453

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
            F +A++ L+EEDRNL  I+ +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATE
Sbjct: 454  FNSAIEMLSEEDRNLSQIQNILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATE 513

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
            TF++GLNMPAKTVVFT+V+K+DG S R++   E++QMSGRAGRRG DDRGI I+MV E+M
Sbjct: 514  TFSIGLNMPAKTVVFTSVRKFDGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMVGEEM 573

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
            +    K++V G+   L S F L Y  ILNLM R EG  + E +++  F+QFQ   ++  +
Sbjct: 574  DPAVAKEIVRGEQDRLNSAFHLGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTASVAGL 631

Query: 547  GKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK 606
             K++ +LEE+ ++L  S E  + EY+ L+  + Q  + +   I+ P+  L +L  GRL++
Sbjct: 632  EKELHELEEKRSNLTISDEGTIREYYDLRKQLRQANEDMQVVISHPDYSLQFLVPGRLLR 691

Query: 607  VREGGTDWGWGVVVNVVKK---------------------------PSAGV--------G 631
            ++  G ++GWGVVVN  K+                           PS G         G
Sbjct: 692  IKHKGIEFGWGVVVNYKKRKPAKNQTEEFEAHQKYILDVLLKIADGPSVGTKTFEDLPPG 751

Query: 632  TLPSRGGGY----IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL 687
              P + G      +VPV L  I  LS IR+ +P D+  LDAR  +  A+ E++ RFP G+
Sbjct: 752  VTPPKEGENTRMEVVPVTLNCIECLSHIRIFLPKDVSSLDARNGVKKALDEVQKRFPDGI 811

Query: 688  PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQ 746
              L+P+++M I+D     L+ ++E LE +L ++PL+ S    ++   +  K E+  +I+ 
Sbjct: 812  AVLDPIENMGIKDDSFKKLLRKVEVLESRLLSNPLHNSPRLPELYDQYSEKVELGSQIKA 871

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
             K K+ D+      DELK R RVL++ G I+   VVQ+K R AC I TGDEL+++EL+FN
Sbjct: 872  TKKKISDAMSIMQLDELKCRKRVLRRFGFINEAEVVQMKARVACEISTGDELMLSELLFN 931

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEV 865
            G FN L   QVA++ S F+  +K+ E   L R ELAKPL+++Q  AR +A++  E KL V
Sbjct: 932  GFFNKLTPEQVASVISVFVFEEKTKETPALTRDELAKPLKEIQAQARIVAKVAQESKLAV 991

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
            N +EYV+S     LM+VIY W+ G +FAE+ +MTD++EGS+IR  RRL+E L Q+  AA+
Sbjct: 992  NEEEYVQS-FHWELMEVIYEWANGKSFAEICKMTDVYEGSLIRVFRRLEECLRQMAQAAK 1050

Query: 926  AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +G   LE KF  A   +RR I+ + SLYL
Sbjct: 1051 VMGSEELESKFETALTKVRRDIVAAQSLYL 1080


>gi|71005930|ref|XP_757631.1| hypothetical protein UM01484.1 [Ustilago maydis 521]
 gi|46097062|gb|EAK82295.1| hypothetical protein UM01484.1 [Ustilago maydis 521]
          Length = 1082

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/938 (50%), Positives = 621/938 (66%), Gaps = 63/938 (6%)

Query: 27   STKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVA 86
            + +K  ++T S  H+VA+P  Y            +  V N   AK Y F LDPFQR SV+
Sbjct: 151  AAEKNMHITHSVRHQVALPPDYPYVP-------LSQHVPNDPPAKEYKFTLDPFQRNSVS 203

Query: 87   CLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDV 146
            C+ERNESVLVSAHTSAGKT VAEYAIA   ++ QRV+YTSP+KALSNQK+REL  EF DV
Sbjct: 204  CIERNESVLVSAHTSAGKTVVAEYAIAQCLKNGQRVVYTSPIKALSNQKFRELTAEFGDV 263

Query: 147  GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEES 206
            GLMTGDVT++P+ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+
Sbjct: 264  GLMTGDVTINPSASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEET 323

Query: 207  IIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLY 266
            II LP  ++ VFLSAT+ NA QFAEWI H H QPCHVVYTDFRPTPLQHY+FP GG G++
Sbjct: 324  IILLPRKVRYVFLSATIPNAMQFAEWIAHTHAQPCHVVYTDFRPTPLQHYLFPQGGEGIH 383

Query: 267  LVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGG--SDIFKI 320
            LVVDE+  FREDNF K    L D+  +         GK  G++ KGG+      SDI+KI
Sbjct: 384  LVVDERGTFREDNFQKAMGALADSKGEDVADPNAGAGKRRGQVKKGGNAGKKGPSDIYKI 443

Query: 321  VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
            VKMIM + + PVIVF+FS+RECE  A+ MSKL+FNT++EK+ V  VF NA++ L+EEDR 
Sbjct: 444  VKMIMVKNYNPVIVFAFSKRECEALALQMSKLEFNTEDEKEMVSTVFSNAINALSEEDRG 503

Query: 381  LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
            LP IE +LPLL+RGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVV
Sbjct: 504  LPQIEHILPLLRRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVV 563

Query: 441  FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA 500
            FTAV KWDG   R + SGE+IQMSGRAGRRG DDRGI I+M DE++E +  K MV G+  
Sbjct: 564  FTAVNKWDGKEFRNLTSGEFIQMSGRAGRRGLDDRGIVIMMFDEKLEPSAAKTMVKGEAD 623

Query: 501  PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL 560
             L S F L Y  ILNLM R EG  + E++++  F QFQ   ++P +  +    EE+   +
Sbjct: 624  RLNSAFHLGYNMILNLM-RVEG-ISPEYMLERCFFQFQNAASVPALEAEQKAAEEQRDLI 681

Query: 561  DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV 620
            +   E EVAEY+ +K  +  L K + + IT P  VL +L  GRL+ V     D+GWG VV
Sbjct: 682  EVEREEEVAEYYDVKHQLETLRKDVQTVITHPSYVLPFLQPGRLVNVCHDDLDFGWGAVV 741

Query: 621  NVVKK-------------PSA----------------GVGT---------------LP-- 634
            +  K+             P+A                G G+                P  
Sbjct: 742  SYEKRLPNTPGKRGPAIDPNAPPQNHYVVDVLLHCASGSGSSDKNAKNDGTSNFRPCPAG 801

Query: 635  SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            S+G   +VPV L  I ++S IR+ +  DLRP + R+++   + E++ RFP+G+P L+P+K
Sbjct: 802  SKGEMVVVPVLLSTIQSISGIRVFLAKDLRPSEPRETVRKNLVEVKRRFPKGVPLLDPIK 861

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 754
            DMKI+D     LV +I+ L+ KL +  L    D  ++     K +   ++    +K   +
Sbjct: 862  DMKIKDESFAHLVEKIKILDDKLGSSRLRNDPDLPRLYAAYSKKQAAQQVVSAIAKKIAA 921

Query: 755  QIQKFR-DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
                 + DELK R RVL++LG   +D VV+ KGR AC I TGDELL+TE+MFNG FNDL 
Sbjct: 922  AHSVLQLDELKCRKRVLRRLGFTTSDDVVEKKGRVACEISTGDELLLTEMMFNGVFNDLT 981

Query: 814  HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
              Q AAL SCF+  +KS+ Q  L   LA PL+ +QE+AR+IA++  E KL +  +EYV S
Sbjct: 982  PPQCAALLSCFVFGEKSTTQTRLNETLAAPLRIMQETARRIAKVSIESKLALVEEEYV-S 1040

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            + +  LMD++  W  GA FAE+ ++TD+FEGSIIR  +
Sbjct: 1041 SFKVELMDLVMQWCNGAKFAEICKLTDVFEGSIIRCCQ 1078


>gi|443923048|gb|ELU42367.1| ATP-dependent RNA helicase DOB1 [Rhizoctonia solani AG-1 IA]
          Length = 1919

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 475/978 (48%), Positives = 635/978 (64%), Gaps = 78/978 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            LT    H+VAVP GY     +  H     P      A+ Y F LDPFQ++SV  ++RNES
Sbjct: 107  LTHQVRHQVAVPPGYPYIPIKE-HVPPEKP------ARVYPFTLDPFQQLSVYAIDRNES 159

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   RDKQRVIYTSP+K      YRE+  EF DVGLMTGDV
Sbjct: 160  VLVSAHTSAGKTVVAEYAIAKCLRDKQRVIYTSPIK------YREMLAEFGDVGLMTGDV 213

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D ERGVVWEE+II LP  
Sbjct: 214  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAERGVVWEETIILLPHT 273

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA +FA WI  +H+QPCHVVYT+FRPTPLQHY+FP GG G+YLVV+EK 
Sbjct: 274  VRYVFLSATIPNAMEFAHWISKIHEQPCHVVYTNFRPTPLQHYLFPAGGDGIYLVVNEKS 333

Query: 274  QFREDNFVK-------LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIME 326
            +FREDNF K       +Q       +GGR + GK        G     SDI+KIVKMI+ 
Sbjct: 334  EFREDNFQKAMGKLASMQGEDPADPLGGRNKRGKTKKGGGTKGP----SDIYKIVKMIIA 389

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + F PVIVF+FS+RECE  A+ MSKL+ N++EE++ V+ V+ NA+  L+EEDR LP IE 
Sbjct: 390  KNFNPVIVFAFSKRECEALALQMSKLECNSEEEQEMVQNVYTNAIAALSEEDRKLPQIEH 449

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K
Sbjct: 450  LLPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTDVEK 509

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG   R + SGEYIQMSGRAGRRG DDRG+ I+MV+ ++E  T K MV G+   L S F
Sbjct: 510  FDGRGVRPLSSGEYIQMSGRAGRRGLDDRGVVIMMVNAKLEPATAKGMVKGEADRLDSAF 569

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK---VSKLEEEAASLDAS 563
             L Y  +LNLM R EG  + E++++  F+Q+Q    +P +  +     +LEE+ A L   
Sbjct: 570  HLGYNMVLNLM-RVEG-VSPEYMLERCFYQYQNGTKVPALESRELITGRLEEKKAELVVP 627

Query: 564  GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV 623
             E  ++EY++++  + +L K   + IT P   L +L  GRL+ V+ G  D+GWGVVVN  
Sbjct: 628  EEESISEYYEIRNQLGELGKDFRTVITHPTYALPFLQPGRLVTVKHGDQDFGWGVVVNFT 687

Query: 624  KKPS-----AGVGTLPSR----------------------------------------GG 638
            ++ +         +LP +                                        G 
Sbjct: 688  QRANNKSAITAFESLPPQEKYVVDVLLNCAKGSTTTGNTKSTEATSSGAFKPCPAGQEGE 747

Query: 639  GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
              + PV L  I+++S IR+ +  DLRP+ AR+++   V E++ RFP+G+  L+P+ +M I
Sbjct: 748  PLVCPVLLSTIASISHIRVHMSKDLRPVSARETLWKVVTEVKRRFPKGIALLDPINNMNI 807

Query: 699  EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQ 757
            +D +  +LV +I  LE +L  H L+       +   + +K +++ +I+ LK  +  +Q  
Sbjct: 808  KDVKFKELVERIATLERQLEGHALHSDPRLPTLYDAYAQKQDLSAQIRVLKKTLGAAQDV 867

Query: 758  KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
               DELK R RVL++LG    D VV++KGR AC I TGDELL+TE++FNG FN L   Q 
Sbjct: 868  MQMDELKCRKRVLRRLGFASTDDVVEIKGRVACEISTGDELLLTEMVFNGVFNSLLPEQC 927

Query: 818  AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            AAL SCF+  +KS +   L+ ELA PL+ LQE AR+IA++  E K+ V+ +EYV+S  + 
Sbjct: 928  AALLSCFVFTEKSEQATKLKEELAGPLRTLQEIARRIAKVAKESKMPVDEEEYVQS-FKV 986

Query: 878  FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
             LMD +  W +GA FA++ +MTD FEGS+IR  RRL E + Q+  AA A+G   LE KF 
Sbjct: 987  ELMDAVLQWCRGAKFADICKMTDQFEGSLIRVFRRLQELIRQMTQAAHAIGNTELEAKFT 1046

Query: 938  AASESLRR--GIMFSNSL 953
             ASE L R   ++F +SL
Sbjct: 1047 KASEMLERQNSVIFCSSL 1064


>gi|303316466|ref|XP_003068235.1| RNA helicase, putative [Coccidioides posadasii C735 delta SOWgp]
 gi|240107916|gb|EER26090.1| RNA helicase, putative [Coccidioides posadasii C735 delta SOWgp]
          Length = 1074

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/968 (47%), Positives = 634/968 (65%), Gaps = 56/968 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+ F+LDPFQ+VS+A +ER ES
Sbjct: 117  LSHQVRHQVALPPNYPYVPISQ-HKPPETP------ARTWPFKLDPFQQVSIASIERGES 169

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 170  VLVSAHTSAGKTVVAEYAIAHCLKNNQRVIYTSPIKALSNQKYREFASEFGDVGLMTGDV 229

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 230  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 289

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY+FP GG G++LVV+EK 
Sbjct: 290  VRYVFLSATIPNAMQFAEWITKTHNQPCHVVYTDFRPTPLQHYLFPAGGEGIFLVVNEKG 349

Query: 274  QFREDNFVKLQDTFLKQK-----IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
             F+E+NF K       +K         R  GK   +    G   G SD+FKIV+MIM + 
Sbjct: 350  NFKEENFQKAMGAIADKKGDDPADANARGKGKGKNKKTNKGGEKGPSDVFKIVRMIMMKS 409

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + PVIVFSFS+RECE HA+++  L FN   EK+ V +VF +A++ L++ED+ LP IE +L
Sbjct: 410  YNPVIVFSFSKRECEAHALTLKNLSFNDDSEKEMVTKVFNSAIEMLSDEDKKLPQIENIL 469

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+D
Sbjct: 470  PLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTNVRKFD 529

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G S R++   E++QMSGRAGRRG DDRGI I+MV+E+M+   +K++V G+   L S F L
Sbjct: 530  GTSQRWLTPSEFVQMSGRAGRRGLDDRGIVIMMVNEEMDPTVVKEIVRGEQDKLNSAFYL 589

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNL+ R EG  + E +++  F QFQ   ++  + K++  LE +  ++  S E  +
Sbjct: 590  GYNMILNLL-RVEG-ISPEFMLERCFAQFQSASSVGTLEKELEDLENQRENMTISDEGTI 647

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-VKKPS 627
             EY+  +  +A   +++   + RP     +L  GRL+ V+ G  D+GWG+VVN   +KP 
Sbjct: 648  REYYDSRQLLATYNEEMRITMCRPTYCQRFLDPGRLVHVQHGKIDFGWGLVVNFQQRKPP 707

Query: 628  AGV----------------------------------GTLPSRGGG----YIVPVQLPLI 649
              V                                  G  P+R G      +VPV L  I
Sbjct: 708  KNVLEEYPPHESIIIDVLLDICENASFHMTGDQTLPPGVRPARKGEKSTMAVVPVVLSCI 767

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
               S +++++P DL+  ++++     + E++ RFP G+  L+P++DM I++      + +
Sbjct: 768  QAFSTVKVTLPKDLKSAESKKYTKKILTEVQRRFPDGVAVLDPIQDMGIKEEPFKMTMRK 827

Query: 710  IEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            +E +E +L ++PL+ S    ++   +  K E+ ++I++ K K+ D+      DELK R R
Sbjct: 828  VEVVEARLLSNPLHNSPRLPELYDQYATKVELVNKIKETKRKISDAMSIIQLDELKCRKR 887

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++   I+A  VVQLK R AC I +GDEL+++EL+FNG FN L   Q AA+ S F+  +
Sbjct: 888  VLRRFQFINASDVVQLKARVACEISSGDELMLSELLFNGFFNTLTPEQCAAVLSVFVFEE 947

Query: 829  KSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
             + E   +   ELAKPL+++Q  AR +A+I  E KL VN +EYV+S  R  LM+VIY W+
Sbjct: 948  TAKETPAITNEELAKPLREIQAQARTVAKIAQESKLAVNEEEYVQS-FRWELMEVIYKWA 1006

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF A+   ++R I
Sbjct: 1007 KGGSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSSDLESKFEASLSLVKRDI 1066

Query: 948  MFSNSLYL 955
            + + SLYL
Sbjct: 1067 VAAQSLYL 1074


>gi|320037994|gb|EFW19930.1| ATP-dependent RNA helicase DOB1 [Coccidioides posadasii str.
            Silveira]
          Length = 1074

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/968 (47%), Positives = 634/968 (65%), Gaps = 56/968 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+ F+LDPFQ+VS+A +ER ES
Sbjct: 117  LSHQVRHQVALPPNYPYVPISQ-HKPPETP------ARTWPFKLDPFQQVSIASIERGES 169

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 170  VLVSAHTSAGKTVVAEYAIAHCLKNNQRVIYTSPIKALSNQKYREFASEFGDVGLMTGDV 229

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 230  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 289

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY+FP GG G++LVV+EK 
Sbjct: 290  VRYVFLSATIPNAMQFAEWITKTHNQPCHVVYTDFRPTPLQHYLFPAGGEGIFLVVNEKG 349

Query: 274  QFREDNFVKLQDTFLKQK-----IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
             F+E+NF K       +K         R  GK   +    G   G SD+FKIV+MIM + 
Sbjct: 350  NFKEENFQKAMGAIADKKGDDPADANARGKGKGKNKKTNKGGEKGPSDVFKIVRMIMMKS 409

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + PVIVFSFS+RECE HA+++  L FN   EK+ V +VF +A++ L++ED+ LP IE +L
Sbjct: 410  YNPVIVFSFSKRECEAHALTLKNLSFNDDSEKEMVTKVFNSAIEMLSDEDKKLPQIENIL 469

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+D
Sbjct: 470  PLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTNVRKFD 529

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G S R++   E++QMSGRAGRRG DDRGI I+MV+E+M+   +K++V G+   L S F L
Sbjct: 530  GTSQRWLTPSEFVQMSGRAGRRGLDDRGIVIMMVNEEMDPTVVKEIVRGEQDKLNSAFYL 589

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNL+ R EG  + E +++  F QFQ   ++  + K++  LE +  ++  S E  +
Sbjct: 590  GYNMILNLL-RVEG-ISPEFMLERCFAQFQSASSVGTLEKELEDLENQRENMTISDEGTI 647

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-VKKPS 627
             EY+  +  +A   +++   + RP     +L  GRL+ V+ G  D+GWG+VVN   +KP 
Sbjct: 648  REYYDSRQLLATYNEEMRITMCRPTYCQRFLDPGRLVHVQHGKIDFGWGLVVNFQQRKPP 707

Query: 628  AGV----------------------------------GTLPSRGGG----YIVPVQLPLI 649
              V                                  G  P+R G      +VPV L  I
Sbjct: 708  KNVLEEYPPHESIIVDVLLDICENASFHMTGDQTLPPGVRPARKGEKSTMAVVPVVLSCI 767

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
               S +++++P DL+  ++++     + E++ RFP G+  L+P++DM I++      + +
Sbjct: 768  QAFSTVKVTLPKDLKSAESKKYTKKILTEVQRRFPDGVAVLDPIQDMGIKEEPFKMTMRK 827

Query: 710  IEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            +E +E +L ++PL+ S    ++   +  K E+ ++I++ K K+ D+      DELK R R
Sbjct: 828  VEVVEARLLSNPLHNSPRLPELYDQYATKVELVNKIKETKRKISDAMSIIQLDELKCRKR 887

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++   I+A  VVQLK R AC I +GDEL+++EL+FNG FN L   Q AA+ S F+  +
Sbjct: 888  VLRRFQFINASDVVQLKARVACEISSGDELMLSELLFNGFFNTLTPEQCAAVLSVFVFEE 947

Query: 829  KSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
             + E   +   ELAKPL+++Q  AR +A+I  E KL VN +EYV+S  R  LM+VIY W+
Sbjct: 948  TAKETPAITNEELAKPLREIQAQARTVAKIAQESKLAVNEEEYVQS-FRWELMEVIYKWA 1006

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF A+   ++R I
Sbjct: 1007 KGGSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSSDLESKFEASLSLVKRDI 1066

Query: 948  MFSNSLYL 955
            + + SLYL
Sbjct: 1067 VAAQSLYL 1074


>gi|119188221|ref|XP_001244717.1| hypothetical protein CIMG_04158 [Coccidioides immitis RS]
 gi|392871432|gb|EAS33347.2| ATP-dependent RNA helicase DOB1 [Coccidioides immitis RS]
          Length = 1074

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/968 (47%), Positives = 633/968 (65%), Gaps = 56/968 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+T+ F+LDPFQ+VS+A +ER ES
Sbjct: 117  LSHQVRHQVALPPNYPYVPISQ-HKPPETP------ARTWPFKLDPFQQVSIASIERGES 169

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 170  VLVSAHTSAGKTVVAEYAIAHCLKNNQRVIYTSPIKALSNQKYREFASEFGDVGLMTGDV 229

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 230  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 289

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY+FP GG G++LVV+EK 
Sbjct: 290  VRYVFLSATIPNAMQFAEWITKTHSQPCHVVYTDFRPTPLQHYLFPAGGEGIFLVVNEKG 349

Query: 274  QFREDNFVKLQDTFLKQK-----IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
             F+E+NF K       +K         R  GK   +    G   G SD+FKIV+MIM + 
Sbjct: 350  NFKEENFQKAMGAIADKKGDDPADANARGKGKGKNKKTNKGGEKGPSDVFKIVRMIMMKS 409

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + PVIVFSFS+RECE HA+++  L FN   EK+ V +VF +A++ L++ED+ LP IE +L
Sbjct: 410  YNPVIVFSFSKRECEAHALTLKNLSFNDDSEKEMVTKVFNSAIEMLSDEDKKLPQIENIL 469

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+D
Sbjct: 470  PLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTNVRKFD 529

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G S R++   E++QMSGRAGRRG DDRGI I+MV+E+M+   +K++V G+   L S F L
Sbjct: 530  GTSQRWLTPSEFVQMSGRAGRRGLDDRGIVIMMVNEEMDPTVVKEIVRGEQDKLNSAFYL 589

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNL+ R EG  + E +++  F QFQ   ++  + K++  LE +  ++  S E  +
Sbjct: 590  GYNMILNLL-RVEG-ISPEFMLERCFAQFQSASSVGTLEKELEDLENQRENMTISDEGTI 647

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-VKKPS 627
             EY+  +  +A    ++   + RP     +L  GRL+ V+ G  D+GWG+VVN   +KP 
Sbjct: 648  REYYDSRQLLATYNDEMRITMCRPTYCQRFLDPGRLVHVQHGKIDFGWGLVVNFQQRKPP 707

Query: 628  AGV----------------------------------GTLPSRGGG----YIVPVQLPLI 649
              V                                  G  P+R G      +VPV L  I
Sbjct: 708  KNVLEEYPPHESIIVDVLLDICENASFHMTGDQTLPPGVRPARKGEKSTMAVVPVVLSCI 767

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
               S +++++P DL+  ++++     + E++ RFP G+  L+P++DM I++      + +
Sbjct: 768  QAFSTVKVTLPKDLKSAESKKYTKKILTEVQRRFPDGVAVLDPIQDMGIKEEPFKMTMRK 827

Query: 710  IEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            +E +E +L ++PL+ S    ++   +  K E+ ++I++ K K+ D+      DELK R R
Sbjct: 828  VEVVEARLLSNPLHNSPRLPELYDQYATKVELVNKIKETKRKISDAMSIIQLDELKCRKR 887

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++   I+A  VVQLK R AC I +GDEL+++EL+FNG FN L   Q AA+ S F+  +
Sbjct: 888  VLRRFQFINASDVVQLKARVACEISSGDELMLSELLFNGFFNTLTPEQCAAVLSVFVFEE 947

Query: 829  KSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
             + E   +   ELAKPL+++Q  AR +A+I  E KL VN +EYV+S  R  LM+VIY W+
Sbjct: 948  TAKETPAITNEELAKPLREIQAQARTVAKIAQESKLAVNEEEYVQS-FRWELMEVIYKWA 1006

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF A+   ++R I
Sbjct: 1007 KGGSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSSDLESKFEASLSLVKRDI 1066

Query: 948  MFSNSLYL 955
            + + SLYL
Sbjct: 1067 VAAQSLYL 1074


>gi|170590328|ref|XP_001899924.1| symbol [Brugia malayi]
 gi|158592556|gb|EDP31154.1| symbol, putative [Brugia malayi]
          Length = 1052

 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/952 (46%), Positives = 636/952 (66%), Gaps = 51/952 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HE+ +P          +      P      AK Y F+LD FQR ++ C++ + SVLV
Sbjct: 119  NCSHEIVLPPNMEYV---PLKPRTTAP------AKMYEFQLDAFQREAITCIDNSHSVLV 169

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VA YAIAM+ RDKQRVIYTSP+KALSNQKYREL +EF DVGLMTGD TL+
Sbjct: 170  SAHTSAGKTVVALYAIAMSLRDKQRVIYTSPIKALSNQKYRELEEEFGDVGLMTGDNTLN 229

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASC+VMTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  +  
Sbjct: 230  PDASCIVMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDTVHY 289

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFA+W+ +LH QP HV+YTD+RP PLQH+++P GGSGLY VV+ +  FR
Sbjct: 290  VFLSATIPNARQFADWVVYLHDQPVHVIYTDYRPVPLQHFIYPXGGSGLYEVVNMQGIFR 349

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            ED F +  +     ++G   + G   G+  KGG+ SG   +  I++ + ER   PVI+FS
Sbjct: 350  EDKFTEAMNVL--SQVGDAGQGGINRGK--KGGT-SGTPHVVNIIRTLKERDMIPVIIFS 404

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FSR+ECE +A  M+ LDFNT++EK  V+++F NA+  L++ED  LP I  +LPLL RGI 
Sbjct: 405  FSRKECEAYATQMTSLDFNTEDEKAKVKEIFVNAISLLSDEDSKLPEIGRVLPLLLRGIG 464

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHHSGLLP++KE++E+LF EGL+K LFATETFAMGLNMPA+TV+FT+ +K+DG  +R+I 
Sbjct: 465  VHHSGLLPIVKEVIEILFGEGLIKTLFATETFAMGLNMPARTVLFTSARKFDGKDYRWIT 524

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRGKDDRG+ I+MVD+QM  +  K ++ G P PL S FRL+Y  +LNL
Sbjct: 525  SGEYIQMSGRAGRRGKDDRGLVILMVDQQMGQDVAKQIIKGAPDPLNSQFRLTYNMVLNL 584

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R EG    E +++NSF+QFQ   ALP +   V + +EE ++     E E++ Y++++ 
Sbjct: 585  L-RVEG-INPEFMLENSFYQFQNYDALPQLYGNVERKKEELSAYKIDKETEISGYYQMEK 642

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--PSAGVG--- 631
             I  L++ +   +T+P+ ++ +L +GRL+ +   G D+GW  +++  KK  P   +G   
Sbjct: 643  QINVLKEAVKEVVTKPKYLVPFLQAGRLLHIVSNGKDFGWAALLDFHKKANPVDPLGLDV 702

Query: 632  ---------------------------TLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
                                           +G   +V V +  +S +S  R+ +P +L+
Sbjct: 703  MYVLDVLILLSTESAKNLSDITQLRPPNANEKGVVEVVSVAISCVSEISAARVKLPQNLK 762

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              + +QS    ++E+  RF   +P L+P+ DMKI D  + + + +++ LE +  +HPL +
Sbjct: 763  AYEGKQSAGRVIKEVLKRFNGIMPLLDPLNDMKINDSVLQENIIKLQALEKRKDSHPLKE 822

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            +   ++I + +++K E+  E++  K++++ +Q     DELK R RVL++L + D + V+ 
Sbjct: 823  NSKFDEIYKQYEKKLELEAELKVAKTELKKAQSLLQLDELKCRKRVLRRLQYCDENDVIT 882

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR +C +   DEL++TE+MF G F +L   Q+AAL SCF+  +K+     L  +L+  
Sbjct: 883  QKGRVSCEVSAADELMLTEMMFGGIFTELATPQLAALLSCFVFEEKAG-GTKLADDLSGC 941

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +QE AR+IA +  E KLE++ D+YVES  +P LMDV++ W  GA+FAE+++ TD+FE
Sbjct: 942  LRAMQEYARRIARVTKESKLEIDEDKYVES-FKPHLMDVVHAWCTGASFAEILKKTDVFE 1000

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L ++  A++A+G  +LE +F  A   L+R I+F+ SLYL
Sbjct: 1001 GSIIRCMRRLEELLREMVGASKAIGNGDLEARFEQARVLLKRDIVFTASLYL 1052


>gi|225680215|gb|EEH18499.1| ATP-dependent RNA helicase DOB1 [Paracoccidioides brasiliensis Pb03]
          Length = 1079

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/971 (48%), Positives = 639/971 (65%), Gaps = 60/971 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    +P      AKT+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYVPISE-HKPPESP------AKTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGADGIHLIVDEKG 352

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG-------SGSGGSDIFKIVKMIME 326
             FRE+NF K  ++ + +K G    N  A  +               G SDIFKIV+MI+ 
Sbjct: 353  VFREENFHKAMES-IAEKQGEDPANPMAKRKGKGKDKKINKGEGSKGPSDIFKIVRMIVM 411

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSFS+RECE  A+ MSK+ FN + EKD V +VF +A++ L++ED+ LP I+ 
Sbjct: 412  KNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKDMVSKVFNSAIEMLSDEDKELPQIKH 471

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 472  ILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 531

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S F
Sbjct: 532  FDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSAF 591

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++ +LE+E A +  + E 
Sbjct: 592  HLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVAGLEKELVELEKEHAGMVIADEG 649

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV-KK 625
             + EY++L+ +IA     + S IT P   L Y+  GRL++++    D+GWG VVN   +K
Sbjct: 650  TIREYYELRQNIATYTSDMQSVITLPNYCLRYMQVGRLVQIQYMDYDFGWGAVVNYQRRK 709

Query: 626  PSAGV-----------------------------------GTLPSRGGGY----IVPVQL 646
            P                                       G  P++ GG     ++PV L
Sbjct: 710  PPRNSPNEQYPPHESYVVDVLLPISEDSAFTTKTIEPLPPGIRPTQPGGKVRLEVIPVLL 769

Query: 647  PLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
              I T+S IRL +P DL+    R  I   + E++ RFP G+P ++P++DM I D     L
Sbjct: 770  YCIKTISHIRLRLPQDLKQASTRNGIHRHIMEVQRRFPDGVPLIDPIEDMGIRDDSFKKL 829

Query: 707  VNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            + +IE LE +L ++PL N  +  +    +  K E+  +I+  K K+ ++      DELK 
Sbjct: 830  LRKIEVLESRLLSNPLHNSPRLPDLYDQYAAKTELASKIKATKKKITEAMSIIQLDELKC 889

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S F+
Sbjct: 890  RKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSVFV 949

Query: 826  PVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
              + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+VIY
Sbjct: 950  FEETSKETPPISKEELAKPLRDIQAQARVIAKVSQESKLTVNEDEYVKG-FRWELMEVIY 1008

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E ++
Sbjct: 1009 EWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEMVK 1068

Query: 945  RGIMFSNSLYL 955
            R I+ + SLYL
Sbjct: 1069 RDIVAAQSLYL 1079


>gi|315056625|ref|XP_003177687.1| ATP-dependent RNA helicase DOB1 [Arthroderma gypseum CBS 118893]
 gi|311339533|gb|EFQ98735.1| ATP-dependent RNA helicase DOB1 [Arthroderma gypseum CBS 118893]
          Length = 1077

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/971 (47%), Positives = 640/971 (65%), Gaps = 60/971 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P+GY        H     P      A+ + F LDPFQ+VS+A +ER ES
Sbjct: 118  LSHQVRHQVALPAGYEYVPISQ-HKPPEKP------ARVWPFTLDPFQQVSIASIEREES 170

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 171  VLVSAHTSAGKTVVAEYAIAQCLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 230

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 231  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 290

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 291  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYLFPAGAEGIHLVVDEKG 350

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   + + +K G    +  A         ++ KGG  +G SDI+KIVKMIM 
Sbjct: 351  VFREENFQKAMSS-IAEKQGADPADAMAKRKGKGKDKKINKGGDKNGPSDIYKIVKMIMM 409

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSFS+RECE  A+ MSKL FN   EK+ V +VF +A++ L+EEDR+LP I+ 
Sbjct: 410  KNYHPVIVFSFSKRECESFALQMSKLAFNDNSEKEMVSKVFNSAIEILSEEDRDLPQIQH 469

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 470  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 529

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R+I S E++QMSGRAGRRG DDRG+ I+M+DE+M+    KD+V G+   L S F
Sbjct: 530  FDGVSSRWITSSEFVQMSGRAGRRGLDDRGLVIMMIDEEMDPPVAKDIVRGEQDKLNSAF 589

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++ +LE    S+    E 
Sbjct: 590  HLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTGSVSGLEKELVELESSRDSMTIEDEG 647

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-VKK 625
             + EY+ L+  I      + + IT P   + +L  GRL+ ++    D+GW VVVN   +K
Sbjct: 648  TIREYYDLRQKIDTYNSDMRAVITHPNYCVSFLKPGRLVHIKHQDYDFGWSVVVNCQARK 707

Query: 626  P------------------------------SAGV-----GTLPSRGGG----YIVPVQL 646
            P                              + GV     G  P++ G      +VPV L
Sbjct: 708  PPKHAPREEYEPHESYIVDVLLPVSEDSFLKTKGVQPLPPGVKPAKNGEPSKLEVVPVLL 767

Query: 647  PLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
              I T+S +++ +P DL+  D+R+++   + +++ RFP GL  L+P+++M I D     L
Sbjct: 768  NCIQTISMVKIKMPSDLKQEDSRKAVKKQITQIQQRFPDGLALLDPIENMNITDDSFKRL 827

Query: 707  VNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            + +IE LE +L ++PL+ S    ++   +  K E+  +I+  K K+ ++      DELK 
Sbjct: 828  LRKIEVLESRLISNPLHNSPRLPELYDQYAAKVELIKKIKDTKKKITEAMSIIQMDELKC 887

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R RVL++   I+ D VVQLK R AC I +GDEL+++EL+FNG FN L   Q AA  S F+
Sbjct: 888  RKRVLRRFQFINEDEVVQLKARVACEISSGDELMLSELLFNGFFNTLTPEQCAAALSVFV 947

Query: 826  PVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
              + + +   +   ELAKPL+ +Q  AR IA++  E KL VN DEYV+S  R  LM+V++
Sbjct: 948  FEENAKDTPAITNEELAKPLRDIQAQARIIAKVSQESKLPVNEDEYVKS-FRWELMEVMF 1006

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W+KG +FA++ +MT+++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF  +   ++
Sbjct: 1007 EWAKGKSFADICKMTEVYEGSLIRAFRRLEECMRQMAQAAKVMGSSDLETKFETSLTLIK 1066

Query: 945  RGIMFSNSLYL 955
            R I+ + SLYL
Sbjct: 1067 RDIVAAQSLYL 1077


>gi|358366016|dbj|GAA82637.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
          Length = 1087

 Score =  868 bits (2242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/970 (47%), Positives = 641/970 (66%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+ + F LDPFQ+V++A ++R ES
Sbjct: 130  LSHQVRHQVAIPPKYPYVPISE-HKPPETP------ARVWPFTLDPFQQVAIASIQREES 182

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE  +EF D GLMTGDV
Sbjct: 183  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAEEFGDAGLMTGDV 242

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 243  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLPDK 302

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY FP G  G++LVVDEK 
Sbjct: 303  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYFFPNGSEGMHLVVDEKG 362

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   + +  K G    +  A         R+ KGG+    SDIFKIVKM+M 
Sbjct: 363  VFREENFQKAMSS-IADKRGDDPSDAMAKRKGKGKDKRLNKGGTQE-KSDIFKIVKMVML 420

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A+ M  L FN   EK+ V++VF +A++ L+EEDR LP I+ 
Sbjct: 421  KNLNPVIVFSFSKRECESCALQMKNLAFNDDSEKEMVQKVFDSAIEMLSEEDRGLPQIQN 480

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT+V+K
Sbjct: 481  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTSVRK 540

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F
Sbjct: 541  FDGFSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF 600

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ    + ++ K+++++EE+ A+L+   E 
Sbjct: 601  HLGYNMILNLM-RVEG-ISPEFMLEKCFYQFQNTAGVAELEKQLTEMEEKRANLNIPDEG 658

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV-KK 625
             + EY+ L+  + +    + + ++ PE  L Y+  GRL++++    ++GWG+VVN   +K
Sbjct: 659  TIREYYDLRKQLRKFGDDVQAVMSHPEHCLSYMTPGRLVQIKHKDMEFGWGIVVNWKHRK 718

Query: 626  PSAG------------------------VGT-----LPS---------RGGGYIVPVQLP 647
            P                           VGT     LP+         +    +VPV L 
Sbjct: 719  PPKNATEEYNDHQKHVVDVLLNIADGDSVGTKSFEDLPAGVRPPKEDEKSRMEVVPVVLS 778

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I +++ + L +P DL+P D R ++   ++E++ RFP G+  L+P+++M I+D E    +
Sbjct: 779  CIQSIAHVCLRLPKDLKPNDTRNNLKNTLEEVKKRFPDGIATLDPIENMGIKDDEFKKTL 838

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             +IE LE +L ++PL++S    ++   +  K ++ ++I++ K K+ ++      +ELK R
Sbjct: 839  RKIEVLESRLLSNPLHESPRLPELYNQYSEKVDLGNKIKETKKKISEAMAIMQLEELKCR 898

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   QVA+  S F+ 
Sbjct: 899  KRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVASALSVFVF 958

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +K+ E   L R +LAKPL+++Q  AR +A++  E KL VN +EYV+      LM+VI+ 
Sbjct: 959  EEKTKETPALTRDDLAKPLREIQAQARIVAKVSQESKLAVNEEEYVQG-FHWELMEVIFE 1017

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G  +LE KF  A   +RR
Sbjct: 1018 WANGKSFADICKMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEDLEGKFETALTKVRR 1077

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1078 DIVAAQSLYL 1087


>gi|145525817|ref|XP_001448725.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416280|emb|CAK81328.1| unnamed protein product [Paramecium tetraurelia]
          Length = 963

 Score =  868 bits (2242), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/951 (45%), Positives = 625/951 (65%), Gaps = 54/951 (5%)

Query: 29  KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
           K Q N    C+HE   P  Y   +++             + AK Y F LDPFQ+V+V  L
Sbjct: 43  KNQEN--EGCIHEWYTPEDYQPIQEKK------------QNAKQYKFTLDPFQKVAVKTL 88

Query: 89  ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
           E NESVLV+AHTSAGKTAVAEYAIAMA RDKQRV+YTSP+KALSNQKYREL QEF DVGL
Sbjct: 89  ESNESVLVAAHTSAGKTAVAEYAIAMAKRDKQRVVYTSPIKALSNQKYRELQQEFGDVGL 148

Query: 149 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
           +TGDVTL+ NA CLVMTTEILR MLYRGSE+++EVAWVI DE+HYM+DRERGVVWEE+II
Sbjct: 149 VTGDVTLNENAFCLVMTTEILRSMLYRGSEIVREVAWVIMDEVHYMRDRERGVVWEETII 208

Query: 209 FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
            L   ++ VFLSAT+ NA++FAEW+C + +QPCHVVYTD+RPTPLQHY+FP G  G+YLV
Sbjct: 209 LLNQNVRFVFLSATIPNASEFAEWVCRIKRQPCHVVYTDYRPTPLQHYLFPSGAEGIYLV 268

Query: 269 VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
           VDE  +F+ED F         Q+   + E    + R  K    + GSD+FK++KMI ER+
Sbjct: 269 VDETGKFKEDKF---------QEAVAKLEENVENTRKRK---ATEGSDLFKLMKMIQERE 316

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             P IVFSFS+RE E +A+ M KLD  T +EK+ +E +++NA++CL+EEDR LP I+LML
Sbjct: 317 LAPAIVFSFSKREVEGYAIGMQKLDLTTPKEKENIETIYKNAMNCLSEEDRQLPQIQLML 376

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
           P+LK+GI +HH GLLP++KE++E+LFQEG +KALF+TETF+MGLNMP++TVVFT+V+K+D
Sbjct: 377 PILKKGIGIHHGGLLPIVKEIIEILFQEGYLKALFSTETFSMGLNMPSRTVVFTSVRKFD 436

Query: 449 GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
           G+  R+I  GEYIQMSGRAGRRG DD+G+CI+M DE+M+    K M+ GK   L S+FRL
Sbjct: 437 GEQFRWIQGGEYIQMSGRAGRRGIDDKGVCILMCDEKMDQEVAKSMLKGKSDCLNSSFRL 496

Query: 509 SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
           SY  ++N M   +     E +IK SFHQFQ ++ LP++ +K+S  +++   +    E ++
Sbjct: 497 SYNMLINSMRMEDT--DPEFIIKKSFHQFQNDRQLPEMKEKLSDFKQKRDQIQIENEDKL 554

Query: 569 AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA 628
             YH L      +  K+   I +P+ VL ++  GR+I+++    DWGWG+ +N ++K   
Sbjct: 555 GNYHDLISQSTHIYNKIRKIIYQPQIVLPFMHIGRIIRIKGSDGDWGWGIQINFMQK-KF 613

Query: 629 GVGTLPSRGGGYIVPVQL----------PL-----------ISTLSKIRLSVPPDLRPLD 667
           G      +    I+ V L          PL           +  +S I+L++P DLR  +
Sbjct: 614 GNKKNKDQEQSIILDVMLYTYLDNIKNEPLQPQLSYDQEGELEIISTIKLNLPKDLRTNE 673

Query: 668 ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL--FAHPLNKS 725
           ++Q I   + +L   F    P ++P+KDMKI D ++  L+ Q + L  ++      LN  
Sbjct: 674 SKQQIKQTMIKLLKEFKGQPPLIHPIKDMKINDDQLDQLLEQRQSLLEQVEQVKKDLNNQ 733

Query: 726 QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
             E ++  +  K ++   I+ L  ++ +S       +LK   R+L++L +I  D +VQ+K
Sbjct: 734 NLEQELSIYDEKIKLGQTIKLLNKQIEESSQMVLSGDLKRMKRILRRLQYISKDEIVQMK 793

Query: 786 GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL- 844
           G+ AC I  GDE+++TEL+ +G FNDL   ++ A+ S F+  + +SE+  L+ +  + L 
Sbjct: 794 GKVACEISAGDEIMLTELLVSGLFNDLSSEEICAVLSVFVHDENNSEKFQLKNDKMQQLY 853

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++ + A+ +  +  E K+ ++  EY+ +T +  +M+V   W +G +F +V +MTD+FEG
Sbjct: 854 TKVLDQAKYLYTVYTESKMNIDEKEYL-ATFKSQMMEVTLAWCQGQSFLQVCKMTDLFEG 912

Query: 905 SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           SIIR  RRLDE + QL  AA+ +G   LE KF  +S+ L++GI+F+ SLYL
Sbjct: 913 SIIRCLRRLDELIKQLEEAAKVIGNKELENKFKESSKKLKKGIVFAASLYL 963


>gi|326469870|gb|EGD93879.1| ATP-dependent RNA helicase DOB1 [Trichophyton tonsurans CBS 112818]
 gi|326479093|gb|EGE03103.1| ATP-dependent RNA helicase DOB1 [Trichophyton equinum CBS 127.97]
          Length = 1077

 Score =  867 bits (2240), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/971 (47%), Positives = 644/971 (66%), Gaps = 60/971 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P+GY        H     P      A+ + F LDPFQ+VS+A +ER ES
Sbjct: 118  LSHQVRHQVALPAGYDYVPISQ-HKPPEKP------ARVWPFTLDPFQQVSIASIEREES 170

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 171  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 230

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 231  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 290

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 291  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYLFPAGAEGIHLVVDEKG 350

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   + + ++ G    +  A         +  KGG  +G SDI+KIVKMIM 
Sbjct: 351  VFREENFQKAMSS-ITERQGADPADAMAKRKGKGKDKKTNKGGDKNGPSDIYKIVKMIMM 409

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSFS+RECE  A+ MSKL FN   EK+ V +VF +A++ L+EEDR+LP I+ 
Sbjct: 410  KNYHPVIVFSFSKRECEAFALQMSKLAFNDNSEKEMVSKVFNSAIEILSEEDRDLPQIQH 469

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 470  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 529

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R+I S E++QMSGRAGRRG DDRG+ I+MVDE+M+    KD+V G+   L S F
Sbjct: 530  FDGVSSRWITSSEFVQMSGRAGRRGLDDRGLVIMMVDEEMDPPVAKDIVRGEQDKLNSAF 589

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++++LE    S+    E 
Sbjct: 590  HLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVSGLEKELAELETSRDSMTIEDEG 647

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-VKK 625
             + EY+ L+  I      + + IT P   + +L  GRL+ ++    D+GW VVVN   +K
Sbjct: 648  TIREYYDLRQKIDTYNSDMRAVITHPNYCVSFLKPGRLVHIKYQDYDFGWSVVVNCQARK 707

Query: 626  P------------------------------SAGVGTLP------SRGGGY---IVPVQL 646
            P                              S GV  LP      ++G      +VPV L
Sbjct: 708  PPKNAPREEYEPHESYIVDALLPVSEDSFLKSKGVQPLPPGVKPANKGEPSKLEVVPVLL 767

Query: 647  PLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
              I ++S +++ +P +L+P ++R+++   + +++ RFP GL  L+P+++M I D E   L
Sbjct: 768  NCIHSISMVKIKMPSNLKPEESRKAVKKQIMQIQQRFPDGLALLDPIENMNITDDEFKRL 827

Query: 707  VNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            + +IE LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      DELK 
Sbjct: 828  LRKIEVLESRLISNPLHNSPRLPELYDQYAAKVELVKKIKETKKKITEAMSIIQMDELKC 887

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R RVL++   I+ D VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA  S F+
Sbjct: 888  RKRVLRRFQFINEDEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAALSVFV 947

Query: 826  PVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
              + + +   +   ELAKPL+ +Q  AR IA++  E KL VN DEYV+S  R  LM+V++
Sbjct: 948  FEENAKDTPAITNEELAKPLRDIQAQARIIAKVSQESKLPVNEDEYVKS-FRWELMEVMF 1006

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W+KG +FA++ +MT+++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF  A   ++
Sbjct: 1007 EWAKGKSFADICKMTEVYEGSLIRAFRRLEECMRQMAQAAKVMGSSDLETKFETALTLIK 1066

Query: 945  RGIMFSNSLYL 955
            R I+ + SLYL
Sbjct: 1067 RDIVAAQSLYL 1077


>gi|332030475|gb|EGI70163.1| Superkiller viralicidic activity 2-like 2 [Acromyrmex echinatior]
          Length = 945

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/948 (48%), Positives = 610/948 (64%), Gaps = 109/948 (11%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           SC+HE+A+P        E            G+ AK Y F LDPFQ+ ++ C+E N+SVLV
Sbjct: 78  SCMHEIAIPPDQEYVPLEH---------QQGKPAKEYKFILDPFQKEAILCIENNQSVLV 128

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT VAEYAIA + +DKQRVIYT+P+KALSNQKYRE ++EFKDVGL+TGDVT++
Sbjct: 129 SAHTSAGKTVVAEYAIACSLKDKQRVIYTTPIKALSNQKYREFYEEFKDVGLVTGDVTIN 188

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P AS L+MTTEILR MLYRGSEV++EV WVIFDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 189 PTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLILLPDNVHY 248

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA QFAEW+ HLH QPCHVV TD+RPTPLQHY+FPVGG G++LVVDE  QF+
Sbjct: 249 VFLSATIPNARQFAEWVAHLHHQPCHVVSTDYRPTPLQHYIFPVGGDGIHLVVDEMGQFK 308

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVI 333
           E+NF +           G    G   GR  KGG   + SG ++IFK+VKMIMER F PVI
Sbjct: 309 EENFNRAMACLQNM---GDAAKGDTKGR--KGGLRATNSGQTNIFKMVKMIMERNFAPVI 363

Query: 334 VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
           +FSFS+++CE +AM M+KLD NT EEK  V++VF NAVD LN+ED+ LP +  +LPLL+R
Sbjct: 364 IFSFSKKDCEVYAMQMAKLDLNTLEEKKLVDEVFNNAVDVLNDEDKKLPQVTNLLPLLRR 423

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           GI +HHSGLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R
Sbjct: 424 GIGIHHSGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFR 483

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
           +I SGEYIQMSGRAGRRG DD+GI I+M+DEQ+     K +V GKP P+ S F L+Y  +
Sbjct: 484 WITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTYNMV 543

Query: 514 LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           LNL+ R E +   E++++ SF QFQ +  +P +  KV +L     +++     E++ YH 
Sbjct: 544 LNLL-RVE-EINPEYMLERSFFQFQNQAGIPVLYNKVKELSTAYNTVNVDRYDEISSYHD 601

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV----------- 622
           ++  + +L  +  S +T+PE ++ +L  GRL+KV+     + WG++VN            
Sbjct: 602 IREQLNRLSGEFQSFLTQPEYLVPFLQPGRLVKVKNEIETFDWGIIVNFKKKNPKNPVKG 661

Query: 623 -----------VKKPSAGVGTLPSR----GGGYIVPVQLPLISTLSKIRLSVPPDLRPLD 667
                      + K S     +P R    G   +VPV   LIS +S +RL  P       
Sbjct: 662 KTVIVIDILLHLSKNSKEGSPIPCREDEEGEIEVVPVLHNLISQISSLRLYYP------- 714

Query: 668 ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
                                           DP V  L  Q        F H       
Sbjct: 715 --------------------------------DPNVNVLYEQ--------FLH------- 727

Query: 728 ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
                    K E+  +++Q K + + ++     DELK R RVL+++ +  +  V++LKGR
Sbjct: 728 ---------KEELAAQLKQAKEEFKQAKSILQMDELKCRKRVLRRMAYCTSADVIELKGR 778

Query: 788 AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
            AC ++  DELL+TE++FNG FN L   Q+ AL SCF+  +KS+E      EL+ PL+Q+
Sbjct: 779 VACELNGADELLMTEMIFNGLFNALSVPQMVALISCFVCDEKSNEMPKSTEELSGPLRQM 838

Query: 848 QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
           Q+ AR+IA++  E  LE++ D YV+   +P+LMDVIY W KGATF ++ +MTDIFEGSII
Sbjct: 839 QDLARRIAKVSTEANLELDEDAYVDR-FKPYLMDVIYAWCKGATFLQICKMTDIFEGSII 897

Query: 908 RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           R  RRL+E L QL  AA+ +G  +LE KF+ A + ++R I+F+ SLYL
Sbjct: 898 RCMRRLEEVLRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL 945


>gi|327294615|ref|XP_003232003.1| ATP-dependent RNA helicase DOB1 [Trichophyton rubrum CBS 118892]
 gi|326465948|gb|EGD91401.1| ATP-dependent RNA helicase DOB1 [Trichophyton rubrum CBS 118892]
          Length = 1077

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/976 (47%), Positives = 642/976 (65%), Gaps = 70/976 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P+GY        H     P      A+ + F LDPFQ+VS+A +ER ES
Sbjct: 118  LSHQVRHQVALPAGYDYIPISQ-HKPPEKP------ARVWPFTLDPFQQVSIASIEREES 170

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 171  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 230

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 231  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 290

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 291  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYLFPAGAEGIHLVVDEKG 350

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMA------------KGGSGSGGSDIFKIV 321
             FRE+NF K   +         R+    +  MA            KGG  +G SDI+KIV
Sbjct: 351  VFREENFQKAMSSI------ADRQGADPADAMAKRKGKGKDKKTNKGGDKNGPSDIYKIV 404

Query: 322  KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
            KMIM + + PVIVFSFS+RECE  A+ MSKL FN   EK+ V +VF +A++ L+EEDR+L
Sbjct: 405  KMIMMKNYHPVIVFSFSKRECEAFALQMSKLAFNDNSEKEMVSKVFNSAIEILSEEDRDL 464

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
            P I+ +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 465  PQIQHILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVF 524

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
            T+V+K+DG S R+I S E++QMSGRAGRRG DDRG+ I+MVDE+M+    KD+V G+   
Sbjct: 525  TSVRKFDGVSSRWITSSEFVQMSGRAGRRGLDDRGLVIMMVDEEMDPPVAKDIVRGEQDK 584

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++++LE    ++ 
Sbjct: 585  LNSAFHLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVSGLEKELAELESSRDAMT 642

Query: 562  ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
               E  + EY+ L+  I      + + IT P   + +L  GRLI ++    D+GW VVVN
Sbjct: 643  IEDEGTIREYYDLRQKIDTYNSDMRAVITHPNYCVSFLKPGRLIHIKYQDYDFGWSVVVN 702

Query: 622  V-VKKP------------------------------SAGVGTLP------SRGGGY---I 641
               +KP                              S GV  LP      ++G      +
Sbjct: 703  CQARKPPKNAPREEYEPRESYIVDVLLPVSEDSFLKSKGVQPLPPGVKPANKGEPSKLEV 762

Query: 642  VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
            VPV L  I ++S +++ +P +L+P ++R+++   + +++ RFP GL  L+P+++M I D 
Sbjct: 763  VPVLLNCIHSISMVKIKMPSNLKPEESRKAVKKQIMQIQQRFPDGLALLDPIENMNITDD 822

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
            E   L+ +IE LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      
Sbjct: 823  EFKRLLRKIEVLESRLISNPLHNSPRLPELYDQYAAKVELVKKIKETKKKITEAMSIIQM 882

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            DELK R RVL++   I+ D VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA 
Sbjct: 883  DELKCRKRVLRRFQFINEDEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAA 942

Query: 821  ASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
             S F+  + + +   +   ELAKPL+ +Q  AR IA++  E KL VN DEYV+S  R  L
Sbjct: 943  LSVFVFEENAKDTPAITNEELAKPLRDIQAQARIIAKVSQESKLPVNEDEYVKS-FRWEL 1001

Query: 880  MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            M+V++ W+KG +FA++ +MT+++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF  A
Sbjct: 1002 MEVMFEWAKGKSFADICKMTEVYEGSLIRAFRRLEECMRQMAQAAKVMGSSDLETKFETA 1061

Query: 940  SESLRRGIMFSNSLYL 955
               ++R I+ + SLYL
Sbjct: 1062 LTLIKRDIVAAQSLYL 1077


>gi|50290975|ref|XP_447920.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527231|emb|CAG60869.1| unnamed protein product [Candida glabrata]
          Length = 1065

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/989 (47%), Positives = 644/989 (65%), Gaps = 64/989 (6%)

Query: 17   LHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFE 76
            L    T E E   K + L+    H+VA+P  Y        +          E A+TY F 
Sbjct: 91   LSTQATTEVEEDGKVK-LSHQVRHQVALPPFYD-------YKPIGQHKRTNE-ARTYPFT 141

Query: 77   LDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKY 136
            LDPFQ  +++C++R ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKY
Sbjct: 142  LDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKY 201

Query: 137  RELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKD 196
            REL  EF DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D
Sbjct: 202  RELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRD 261

Query: 197  RERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHY 256
            +ERGVVWEE+II LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY
Sbjct: 262  KERGVVWEETIILLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHY 321

Query: 257  VFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS----GRMAKGGSGS 312
            +FP  G G+YLVVDEK  FRE+NF K   +   Q   G   N   S    G+  KGG+  
Sbjct: 322  LFPAHGDGIYLVVDEKSTFREENFQKAMTSIGNQ--AGDDPNSTESRGKKGQTFKGGAAK 379

Query: 313  GGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
            G +  DI+KIVKMI ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EKD + ++F NA
Sbjct: 380  GDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKDALTKIFNNA 439

Query: 371  VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
            +  L E DR LP I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++
Sbjct: 440  IALLPENDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSI 499

Query: 431  GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT 490
            GLNMPAKTVVFT+V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME   
Sbjct: 500  GLNMPAKTVVFTSVRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQV 559

Query: 491  LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
             K MV G+   L S F L Y  ILNLM R EG  + E +++NSF QFQ   A+P + KK+
Sbjct: 560  AKGMVKGQADRLDSAFHLGYNMILNLM-RVEG-ISPEFMLENSFFQFQNVIAVPVMEKKL 617

Query: 551  SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK-VRE 609
             + +++  ++    E+ + EY+++K  +    + +   +T P  +L +L  GRLI+ V +
Sbjct: 618  IEYQQQYDNIHIEDESGIKEYYEVKQTLKGYYEDVRKVMTHPAHLLSFLQPGRLIEVVVD 677

Query: 610  GGTDWGWGVVVNVVKKPSAGVGT-LPSRGGGYIVPVQLPLISTLSKIRL------SVPPD 662
            G   +GWG VV+  K+ +    T + S    YIV V +  +   S I L      + P  
Sbjct: 678  GNQRYGWGAVVDFAKRVNKRNPTAVYSDYDSYIVNVVVSSMYVDSPINLIKPFNPAFPEG 737

Query: 663  LRPLDARQSILLA-----------------------------------VQELESRFPQGL 687
            +RP    +  L A                                   ++E+  RFP G+
Sbjct: 738  IRPAQEGEKSLCAIIPITISSITNVGNLRLFMPKDVKASGQVDIVGKSLKEVGRRFPDGI 797

Query: 688  PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQ 746
            P ++PVK MKI D + + L  +I+ LE KL  +PL+ S   N++   +  K E++  +++
Sbjct: 798  PLIDPVKHMKITDDDFMKLQKKIQVLEEKLKTNPLHGSVKLNELYEAYNSKHELSDAMKK 857

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            L++K+ DSQ     D+L+ R RVL++L     + +++LKGR AC I +GDELL+TEL+FN
Sbjct: 858  LRAKITDSQAVIQLDDLRKRKRVLRRLEFCTPNDIIELKGRVACEISSGDELLLTELIFN 917

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
            G F +L   Q AAL SCF   ++  E   L+ EL++PL+ L+E A KIA+I  + K+EV 
Sbjct: 918  GNFTELKPEQAAALLSCFAFQERCKEAPKLKPELSEPLKDLRELAAKIAKIMKDSKIEVV 977

Query: 867  VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
              +YVES  R  LM+V+Y W +GA+F ++ +MTD++EGS+IR  +RL+E + +L   A  
Sbjct: 978  EKDYVES-FRHELMEVVYEWCRGASFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANT 1036

Query: 927  VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +G   L +K  A  + + R I+ + SLYL
Sbjct: 1037 IGNQALREKMEAVLKLIHRDIVSAGSLYL 1065


>gi|361127209|gb|EHK99185.1| putative Uncharacterized helicase C6F12.16c [Glarea lozoyensis 74030]
          Length = 1078

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/970 (46%), Positives = 623/970 (64%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L  +  H+V++P  Y        H +   P      A+T+ FELDPFQ+VS+A +ERNES
Sbjct: 121  LQHNIQHQVSLPPDYVYVPISQ-HKSPEKP------ARTWPFELDPFQKVSIASIERNES 173

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 174  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 233

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 234  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKSRGVVWEETIILLPDK 293

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H+QPCH+VYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 294  VRYVFLSATIPNAMQFAEWITKTHQQPCHIVYTDFRPTPLQHYFFPAGADGIHLIVDEKG 353

Query: 274  QFREDNFVKLQDTFLKQKIG------GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
             FREDNF K   T +++K G        R+ G+   +    G     SDI+KIV+MIM +
Sbjct: 354  NFREDNFQKAMAT-IEEKKGSDPSDINARQKGRGKNKKTNTGGNKDTSDIYKIVRMIMLK 412

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             + PVIVFSFS+RECE +A+ MS + FN   EK  V +VF++A++ L+EED+ LP I+ +
Sbjct: 413  HYNPVIVFSFSKRECEAYALQMSTMAFNDDSEKAMVSKVFESAIESLSEEDKTLPQIQHI 472

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 473  LPLLRRGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTVVFTSVQKF 532

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S RY+   E++QMSGRAGRRG DDRGI I+M++++M+  T K++V G+   L S F 
Sbjct: 533  DGTSQRYLTPSEFVQMSGRAGRRGLDDRGIVIMMINDKMDPPTAKEIVRGEQDKLNSAFY 592

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E ++++ F+QFQ    +  + K +  L+ E  S++   EA 
Sbjct: 593  LGYNMILNLM-RVEG-ISPEFMLEHCFYQFQNTSGVSGLEKDLHDLQIERDSVEIPDEAI 650

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-- 625
            + EY  L+  + Q  K +   I  P   L ++  GR++ ++    D+GWG VV    +  
Sbjct: 651  IKEYFDLRQQLTQYTKDMRDVINHPNYCLQFMQPGRIVHIKYQDQDYGWGAVVKFTPRRP 710

Query: 626  ----------------------------PSAGVGTLP---------SRGGGYIVPVQLPL 648
                                        P+     +P          +G   +VPV L  
Sbjct: 711  AKDESNPLAPQESYILDVLLRISDHSHVPTQTTTDIPPGLHPPAEGEKGKMEVVPVLLSC 770

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            I  +  +R+ +P  L   D R ++  +++E+  RFP G+  L+P++ M I D     L+ 
Sbjct: 771  IEAIGHVRIFMPKSLTHTDERNTVRKSLEEVSRRFPDGISVLDPIEHMGITDDSFKKLLR 830

Query: 709  QIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            +IE LE +L A+PL+ S    ++   +  K ++  +I++ K  +  +      DELK+R 
Sbjct: 831  KIEVLESRLLANPLHNSPRLPELYNQYAGKIDMGLKIKEKKKAITAALSIMQLDELKSRK 890

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVTELMFNGTFNDLDHHQVAALASCFI 825
            RVL++LG I+   VVQLK R AC I TGD  E L+ EL+FN  FN++     AA+ SCFI
Sbjct: 891  RVLRRLGFINDQEVVQLKARVACEISTGDGHECLLAELLFNRFFNEMSPEMCAAVLSCFI 950

Query: 826  PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
              ++ S+   L+ EL+K  +++Q  AR +A++  E KL+VN DEYVES  +  LMDV+  
Sbjct: 951  -FEEKSQAPALKEELSKYFREIQSQARIMAKVSQESKLKVNEDEYVES-FKWQLMDVVLA 1008

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W++G +FAE+ +MTD++EGS+IR  RRL+E L Q+  A + +G   L  KF  +   +RR
Sbjct: 1009 WAQGKSFAEICKMTDVYEGSLIRLFRRLEELLRQMAQAGKVMGSDELSAKFEESLSKIRR 1068

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1069 DIVAAQSLYL 1078


>gi|156059878|ref|XP_001595862.1| hypothetical protein SS1G_03952 [Sclerotinia sclerotiorum 1980]
 gi|154701738|gb|EDO01477.1| hypothetical protein SS1G_03952 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1082

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/983 (45%), Positives = 637/983 (64%), Gaps = 63/983 (6%)

Query: 21   GTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPF 80
            G PEE++   Q N+     H+V++P  Y        H   A P      A+T+ FELDPF
Sbjct: 115  GAPEEKALVLQHNIQ----HQVSLPPDYDYIPISQ-HKAPAEP------ARTWPFELDPF 163

Query: 81   QRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELH 140
            Q+V++A ++RNESVLVSAHTSAGKT  AEYAIA   ++ QRVIYTSP+KALSNQKYRE  
Sbjct: 164  QKVAIASIQRNESVLVSAHTSAGKTVTAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFT 223

Query: 141  QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG 200
             +F DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RG
Sbjct: 224  ADFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKARG 283

Query: 201  VVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPV 260
            VVWEE+II LP  ++ VFLSAT+ NA QFAEWI   H QPCH+VYTDFRPTPLQHY FP 
Sbjct: 284  VVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKTHNQPCHIVYTDFRPTPLQHYFFPA 343

Query: 261  GGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----GRRENGKASGRMAKGGSGSGGS 315
            G  G++L+VDEK  FREDNF K   T  ++K         ++ G+   +    G+   GS
Sbjct: 344  GADGIHLIVDEKGNFREDNFSKAMATIEEKKGSDPADINAKQKGRGKDKKTNKGANKEGS 403

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
            DI+KIV+MIM + + PVIVFSFS+RECE +A+ MS + FN Q EKD V +VF++A++ L+
Sbjct: 404  DIYKIVRMIMLKHYNPVIVFSFSKRECEAYALQMSSMAFNDQSEKDMVSKVFESAIESLS 463

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
            EEDR LP I+ +LPLL+RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMP
Sbjct: 464  EEDRTLPQIQHILPLLRRGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMP 523

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
            AKTVVFT+V+K+DG+  RY+   E++QMSGRAGRRG DDRGI I+M++++ME  + K +V
Sbjct: 524  AKTVVFTSVEKFDGEKMRYLTPSEFVQMSGRAGRRGLDDRGIVIMMINDKMEPESAKTIV 583

Query: 496  LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
             G+   L S F L Y  ILNLM R EG  + E ++++ F+QFQ   ++  + K++  L+ 
Sbjct: 584  RGEQDKLNSAFYLGYNMILNLM-RLEG-ISPEFMLEHCFYQFQNTSSVTGLEKELQDLQV 641

Query: 556  EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
                +    EA + +Y+ L+  +    K +   I  P   L ++  GR++ ++    D+G
Sbjct: 642  ARDDVQIPDEATIKDYYDLRQQLTTYTKDMRDVINHPNYCLQFMQPGRVVHIKYQNHDFG 701

Query: 616  WGVVVNVV-KKPSAG------------------------VGT-----LP---------SR 636
            WG VV    ++P+ G                        VGT     LP          +
Sbjct: 702  WGAVVKFTPRRPAKGSSVEYAPQQSYILDVLLLVSSDSIVGTQTQNDLPLGITPPGEGDK 761

Query: 637  GGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
            G   +VPV L  +  +  +R+ +P DL P + R  I  ++ E++ RFP G+  L+P+++M
Sbjct: 762  GKMEVVPVLLSCVEAIGHVRIFLPKDLHPANERNQIRKSLDEVKRRFPDGIAVLDPIENM 821

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ 755
             I D     L+ +IE LE +L ++PL N  +  +    +  K ++  +I++ +  +  + 
Sbjct: 822  GITDDSFKRLLRKIEVLESRLLSNPLHNSPRLPDLYNQYAGKLDITKQIKEKRKAITAAL 881

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI-DTGD--ELLVTELMFNGTFNDL 812
                 DELK+R RVL++LG I+   VV+LK R AC I  TGD  ELL++EL+FNG FNDL
Sbjct: 882  SIMQLDELKSRKRVLRRLGFINEQEVVELKARVACEISSTGDGHELLLSELLFNGYFNDL 941

Query: 813  DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
                 AA+ S FI  ++ S+   L+ ELA   +++Q  AR IA++  E KL++N +EYV 
Sbjct: 942  TPEMCAAVLSVFI-FEEKSQCPPLKEELAAKYREIQAQARIIAKVTAESKLKMNEEEYV- 999

Query: 873  STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
            ++ +  LM+V+Y W++G +FAE+ +MTD++EGS+IR  RRL+E L Q+  A + +G   +
Sbjct: 1000 TSFKWQLMEVVYVWAQGKSFAEICKMTDVYEGSLIRLFRRLEELLRQMAQAGKVMGSDEV 1059

Query: 933  EKKFAAASESLRRGIMFSNSLYL 955
              KF  + + +RR I+ + SLYL
Sbjct: 1060 SNKFDESLKKIRRDIVAAQSLYL 1082


>gi|440637545|gb|ELR07464.1| ATP-dependent RNA helicase DOB1 [Geomyces destructans 20631-21]
          Length = 1079

 Score =  863 bits (2229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/970 (46%), Positives = 628/970 (64%), Gaps = 59/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L  +  H+V++P  Y            +  V   + A+ + FELDPFQ+V++A ++R ES
Sbjct: 121  LQHNIQHQVSLPPDYDYV-------PISQHVPPEKPARVWPFELDPFQKVAIASIQRGES 173

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT  AEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 174  VLVSAHTSAGKTVTAEYAIAQSLQNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 233

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EV WV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 234  TINPTATCLVMTTEILRSMLYRGSEIMREVGWVVFDEIHYMRDKARGVVWEETIILLPDK 293

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ N+ QFAEWI   H QPCH+VYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 294  VRYVFLSATIPNSMQFAEWITKTHNQPCHIVYTDFRPTPLQHYFFPAGADGIHLIVDEKG 353

Query: 274  QFREDNFVKLQDTFLKQKIGGRRE-NGKASGRMAKGGSGSGG----SDIFKIVKMIMERK 328
             FR+DNF K   T   +K     + N K  GR     +  GG    +DI+KIV+MIM + 
Sbjct: 354  NFRQDNFDKAMSTIEDKKGSDPADINAKQKGRGKDKKTNKGGNKETTDIYKIVRMIMVKH 413

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + PVIVFSFS+RECE +A+ MS + FN   EK  V +VF +A++ L++ED+ LP I+ +L
Sbjct: 414  YNPVIVFSFSKRECEAYALQMSSMAFNDDSEKAMVSKVFDSAIEMLSDEDKQLPQIQHIL 473

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMPAKTVVFT+V+K+D
Sbjct: 474  PLLRRGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTVVFTSVRKFD 533

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G S RY+   E++QMSGRAGRRG DDRGI I+M+D++ME    K++V G+   L S F L
Sbjct: 534  GVSQRYLTPSEFVQMSGRAGRRGLDDRGIVIMMIDDKMEPAVAKEIVRGEQDKLNSAFYL 593

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNLM R EG  + E ++++ F QFQ    +  + + + +L+ E   ++   E  +
Sbjct: 594  GYNMILNLM-RVEG-ISPEFMLEHCFFQFQNTSGVSGLERDLQQLQIERDGMEIPDETTI 651

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--- 625
             +Y+ L+  +    K L + I  P   L +L SGRL+ ++  G D+GWG VV    +   
Sbjct: 652  KDYYDLRQQLDTYSKDLKAVINHPNYSLPFLQSGRLVHIKHKGEDFGWGAVVKFTARRAP 711

Query: 626  -----------------------PSAGVGT-----LPS---------RGGGYIVPVQLPL 648
                                    S+ VGT     +P+          G   IVP+ L  
Sbjct: 712  KGQVVEEYAPQESYIADVLLPVSESSFVGTQTHQEIPAGVHPPNQGETGKMEIVPILLSC 771

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            I ++  +R+ +P DL+  D R ++  ++ E++ RFP G+  L+P+++M I+D     L+ 
Sbjct: 772  IESIGHVRIFLPKDLKAADQRNTVRKSLDEVKRRFPDGIAVLDPIENMGIKDESFKKLLR 831

Query: 709  QIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            +IE LE +L ++PL N  +  +    +  K E  ++I++ K  +  +      DELK+R 
Sbjct: 832  KIEVLESRLLSNPLHNSPRLTDLFDKYAEKIEFGNKIKEKKKSITAAHAIMQLDELKSRK 891

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVTELMFNGTFNDLDHHQVAALASCFI 825
            RVL++LG I+   VV+LK R AC I TGD  ELL++EL+FN  FN+L     AA+ SCFI
Sbjct: 892  RVLRRLGFINDQEVVELKARVACEISTGDGHELLLSELLFNRFFNELSPELCAAVLSCFI 951

Query: 826  PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
              ++ S+   L+ ELAKP +++Q  AR IA++  E KLEVN +EYV+S  +  LMDV+  
Sbjct: 952  -FEEKSQCPPLKEELAKPFREIQAQARIIAKVSQESKLEVNEEEYVQS-FKYQLMDVVLA 1009

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W++G +FAE+ +MTD++EGS+IR  RRL+E L Q+  A + +G  +L  KF  A   ++R
Sbjct: 1010 WTQGKSFAEICKMTDVYEGSLIRLFRRLEELLRQMAQAGKVMGSDDLSAKFEEALTKIKR 1069

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1070 DIVAAQSLYL 1079


>gi|67528428|ref|XP_662016.1| hypothetical protein AN4412.2 [Aspergillus nidulans FGSC A4]
 gi|40741139|gb|EAA60329.1| hypothetical protein AN4412.2 [Aspergillus nidulans FGSC A4]
 gi|259482777|tpe|CBF77580.1| TPA: ATP dependent RNA helicase (Dob1), putative (AFU_orthologue;
            AFUA_4G07160) [Aspergillus nidulans FGSC A4]
          Length = 1073

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/968 (47%), Positives = 630/968 (65%), Gaps = 57/968 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    NP      A+ + F LDPFQ+V+V+ ++R ES
Sbjct: 117  LSHQVRHQVAIPPKYPYVPISQ-HKPPENP------ARVWPFTLDPFQQVAVSSIQRGES 169

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 170  VLVSAHTSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 229

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D  RGVVWEE+II LP  
Sbjct: 230  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDATRGVVWEETIILLPDK 289

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 290  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYFFPAGSEGMHLIVDEKG 349

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG------GSDIFKIVKMIMER 327
             FRE+NF K   +   +K G    +  A  +                 DI+KIVKMIM +
Sbjct: 350  VFREENFQKAMSSIADKK-GDDPADALAKRKGKGKDKKLNKGGTQEKDDIYKIVKMIMLK 408

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
               PVIVFSFS+RECE +A+ M  L FN   EK+ V +VF +A++ L+EEDRNLP I+ +
Sbjct: 409  SLNPVIVFSFSKRECEFYALKMKSLAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQNI 468

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K+
Sbjct: 469  LPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKF 528

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG S R++   E++QMSGRAGRRG DDRGI I+M+ E+M+    K++V G+   L S F 
Sbjct: 529  DGFSQRWVTPSEFVQMSGRAGRRGLDDRGIVIMMIGEEMDPAVAKEIVRGEQDRLNSAFH 588

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNLM R EG  + E +++  F+QFQ    L  + K++++LEE+ A++  S E  
Sbjct: 589  LGYNMILNLM-RVEG-ISPEFMLERCFYQFQNTAGLAGLEKELAELEEKRANMTISDEGT 646

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK-KP 626
            + EY+ ++  I Q    + + I+ PE  + +L  GRL+ ++    D+GWGVVVN+ K KP
Sbjct: 647  IREYYDIRTQIDQFNDDVRAVISHPEYSVPFLTPGRLLHIKYKDFDFGWGVVVNIKKRKP 706

Query: 627  -------------------------SAGVGTL--------PSRGGGY----IVPVQLPLI 649
                                     S+G  T         P + G      +VP+ L  I
Sbjct: 707  QKNSEELTGHASYIVDVLLRVADGSSSGTKTFEDLPQGVRPPKEGEKSQMEVVPLLLNCI 766

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
              +S +R+ VP DL+  D+R  +   V++++ RFP G+  L+P++DM I+D E    + +
Sbjct: 767  QAISHVRMIVPKDLQSKDSRTDMGKKVEQIKKRFPDGIAVLDPIEDMGIKDDEFKKTLRK 826

Query: 710  IEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            IE LE +L  +PL N  + E     +  K ++ ++I+  K K+ +    +  DELK R R
Sbjct: 827  IEVLESRLVTNPLHNSPRLEELYEQYAEKLDLGNKIKATKKKISEGMAIQQLDELKCRKR 886

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN L   Q AA+ S F+  +
Sbjct: 887  VLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNKLTPEQAAAVLSVFVFEE 946

Query: 829  KSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
            K+ E   L + ELAKPL+++Q  AR IA++  E KL V+ ++YV+S     LM+VIY W+
Sbjct: 947  KTKETPPLSKEELAKPLKEIQAQARIIAKVAQESKLAVSEEDYVQS-FHWELMEVIYEWA 1005

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
             G +FA++  MTD++EGS+IR  RRL+E L Q+  AA+ +G   LE KF  A   +RR I
Sbjct: 1006 NGKSFADICGMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEELESKFETALTKVRRDI 1065

Query: 948  MFSNSLYL 955
            + + SLYL
Sbjct: 1066 VAAQSLYL 1073


>gi|145256812|ref|XP_001401524.1| hypothetical protein ANI_1_338184 [Aspergillus niger CBS 513.88]
 gi|134058433|emb|CAK47920.1| unnamed protein product [Aspergillus niger]
          Length = 1083

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/970 (47%), Positives = 638/970 (65%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+ + F LDPFQ+V++A ++R ES
Sbjct: 126  LSHQVRHQVAIPPKYPYVPISE-HKPPETP------ARVWPFTLDPFQQVAIASIQREES 178

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE  +EF D GLMTGDV
Sbjct: 179  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAEEFGDAGLMTGDV 238

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 239  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLPDK 298

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 299  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYFFPNGSEGMHLIVDEKG 358

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   + +  K G    +  A         R+ KGG+    SDIFKIVKM+M 
Sbjct: 359  VFREENFQKAMSS-IADKRGDDPSDAMAKRKGKGKDKRLNKGGTQE-KSDIFKIVKMVML 416

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A+ M  L FN   EK+ V++VF +A++ L+EEDR+LP I+ 
Sbjct: 417  KNLNPVIVFSFSKRECESCALQMKNLAFNDDSEKEMVQKVFDSAIEMLSEEDRDLPQIQN 476

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT+V+K
Sbjct: 477  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTSVRK 536

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F
Sbjct: 537  FDGFSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPTVAKEIVRGEQDRLNSAF 596

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ    + ++ K+++++EE+ A+L    E 
Sbjct: 597  HLGYNMILNLM-RVEG-ISPEFMLEKCFYQFQNTAGVAELEKQLTEMEEKRANLSIPDEG 654

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV-KK 625
             + EY+ L+  + +    + + ++ PE  L Y+  GRL++++    ++GWG+VVN   +K
Sbjct: 655  TIREYYDLRKQLRKFGDDVQAVMSHPEHCLSYMTPGRLVQIKHKDLEFGWGIVVNWKHRK 714

Query: 626  P--------------------------SAGV--------GTLPSRGGGY----IVPVQLP 647
            P                          S G         G  P + G      +VPV L 
Sbjct: 715  PPKNSNEEFNDHQKHVVDVLLNIADGDSVGTKSFEDLPAGVRPPKEGEKSRMEVVPVVLS 774

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I +++ + L +P DL+P D R ++   ++E++ RFP G+  L+P+++M I+D E    +
Sbjct: 775  CIQSIAHVCLRLPKDLKPNDTRNNLKNTLEEVKKRFPDGIATLDPIENMGIKDDEFKKTL 834

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             +IE LE +L ++PL++S    ++   +  K  +  +I++ K K+ D+      +ELK R
Sbjct: 835  RKIEVLESRLLSNPLHESPRLPELYDQYSEKVNLGTKIKETKKKISDAMAIMQLEELKCR 894

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   QVAA  S F+ 
Sbjct: 895  KRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVAAALSVFVF 954

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +K+ E   L R +LAKPL+++Q  AR +A++  E KL VN +EYV+      LM+VI+ 
Sbjct: 955  EEKTKETPALTREDLAKPLREIQAQARIVAKVSQESKLAVNEEEYVQG-FHWELMEVIFE 1013

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G  +LE KF  A   +RR
Sbjct: 1014 WANGKSFADICKMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEDLEGKFETALTKVRR 1073

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1074 DIVAAQSLYL 1083


>gi|296827030|ref|XP_002851097.1| ATP-dependent RNA helicase DOB1 [Arthroderma otae CBS 113480]
 gi|238838651|gb|EEQ28313.1| ATP-dependent RNA helicase DOB1 [Arthroderma otae CBS 113480]
          Length = 1076

 Score =  860 bits (2221), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/976 (47%), Positives = 640/976 (65%), Gaps = 70/976 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P+GY        H     P      A+ +SF LDPFQ+VS+A +ER ES
Sbjct: 117  LSHQVRHQVALPAGYEYVPISQ-HKPPEKP------ARVWSFTLDPFQQVSIASIEREES 169

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 170  VLVSAHTSAGKTVVAEYAIAQCLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 229

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 230  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 289

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 290  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPTPLQHYLFPAGAEGIHLVVDEKG 349

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMA------------KGGSGSGGSDIFKIV 321
             FRE+NF K   +         R+    +  MA            KGG  +G SDI+KIV
Sbjct: 350  VFREENFQKAMSSI------AERQGADPADAMAKRKGKGKDKKTNKGGDKNGLSDIYKIV 403

Query: 322  KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
            KMIM + + PVIVFSFS+RECE  A+ MSKL FN   EK+ V +VF +A++ L+EEDR+L
Sbjct: 404  KMIMIKNYHPVIVFSFSKRECEAFALQMSKLAFNDNSEKEMVTKVFNSAIEILSEEDRDL 463

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
              I+ +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 464  VQIQNILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVF 523

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
            T V+K+DG S R+I S E++QMSGRAGRRG DDRG+ I+M+DE+M+    K++V G+   
Sbjct: 524  TNVRKFDGVSSRWITSSEFVQMSGRAGRRGLDDRGLVIMMIDEEMDPAVAKEIVRGEQDK 583

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++++LE    ++ 
Sbjct: 584  LNSAFHLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVSGLEKELAELENSRGAMV 641

Query: 562  ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
             + E  + EY+ L+  I      + + IT P   + +L  GRL+ ++    D+GW VVVN
Sbjct: 642  IADEGTIREYYDLRQKIDTYTSDMRAVITHPSYCVSFLKPGRLVHIKYQDHDFGWSVVVN 701

Query: 622  V-VKKP------------------------------SAGVGTLP-----SRGGGY----I 641
              +++P                              + GV  LP     ++ G      +
Sbjct: 702  CQMRRPPKNAPREEYPPHESYIVDVLLPVSEDSFLKTKGVQPLPPGVKAAKKGESSKMEV 761

Query: 642  VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
            VPV L  I  +S +++ +P +L+P D+R+ +   + ++++RFP G+  L+P+++M I D 
Sbjct: 762  VPVLLNCIHAISMVKIKIPGNLKPEDSRKDVKKQIAQIQTRFPDGMALLDPIENMNITDD 821

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
                L+ +IE LE +L ++PL+ S    ++   +  K E+N +I+  K K+ ++      
Sbjct: 822  SFKRLLRKIEVLESRLISNPLHSSPRLPELYDQYAAKVELNKKIKDTKKKITEAMSIIQM 881

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            DELK R RVL++   I+ D VVQLK R AC I +GDEL+++EL+FNG FN L   Q AA 
Sbjct: 882  DELKCRKRVLRRFQFINEDEVVQLKARVACEISSGDELMLSELLFNGFFNTLTPEQCAAA 941

Query: 821  ASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
             S F+  + + +   +   ELAKPL+ +Q  AR IA++  E KL +N +EYV+S  R  L
Sbjct: 942  LSVFVFEENAKDTPAITNEELAKPLRDIQAQARIIAKVSQESKLPMNEEEYVKS-FRWEL 1000

Query: 880  MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            M+V++ W+KG +FAE+ +MT+++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF  +
Sbjct: 1001 MEVMFEWAKGKSFAEICKMTEVYEGSLIRAFRRLEECMRQMAQAAKVMGSSDLETKFETS 1060

Query: 940  SESLRRGIMFSNSLYL 955
               ++R I+ + SLYL
Sbjct: 1061 LTLIKRDIVAAQSLYL 1076


>gi|350632073|gb|EHA20441.1| hypothetical protein ASPNIDRAFT_213243 [Aspergillus niger ATCC 1015]
          Length = 1087

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/970 (47%), Positives = 638/970 (65%), Gaps = 60/970 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H     P      A+ + F LDPFQ+V++A ++R ES
Sbjct: 130  LSHQVRHQVAIPPKYPYVPISE-HKPPETP------ARVWPFTLDPFQQVAIASIQREES 182

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE  +EF D GLMTGDV
Sbjct: 183  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAEEFGDAGLMTGDV 242

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 243  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIILLPDK 302

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY FP G  G++L+VDEK 
Sbjct: 303  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYFFPNGSEGMHLIVDEKG 362

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKA-------SGRMAKGGSGSGGSDIFKIVKMIME 326
             FRE+NF K   + +  K G    +  A         R+ KGG+    SDIFKIVKM+M 
Sbjct: 363  VFREENFQKAMSS-IADKRGDDPSDAMAKRKGKGKDKRLNKGGTQE-KSDIFKIVKMVML 420

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PVIVFSFS+RECE  A+ M  L FN   EK+ V++VF +A++ L+EEDR+LP I+ 
Sbjct: 421  KNLNPVIVFSFSKRECESCALQMKNLAFNDDSEKEMVQKVFDSAIEMLSEEDRDLPQIQN 480

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT+V+K
Sbjct: 481  ILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTSVRK 540

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R++   E+IQMSGRAGRRG DDRGI I+MV E+M+    K++V G+   L S F
Sbjct: 541  FDGFSQRWVTPSEFIQMSGRAGRRGLDDRGIVIMMVGEEMDPAVAKEIVRGEQDRLNSAF 600

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNLM R EG  + E +++  F+QFQ    + ++ K+++++EE+ A+L    E 
Sbjct: 601  HLGYNMILNLM-RVEG-ISPEFMLEKCFYQFQNTAGVAELEKQLTEMEEKRANLSIPDEG 658

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV-KK 625
             + EY+ L+  + +    + + ++ PE  L Y+  GRL++++    ++GWG+VVN   +K
Sbjct: 659  TIREYYDLRKQLRKFGDDVQAVMSHPEHCLSYMTPGRLVQIKHKDLEFGWGIVVNWKHRK 718

Query: 626  P--------------------------SAGV--------GTLPSRGGGY----IVPVQLP 647
            P                          S G         G  P + G      +VPV L 
Sbjct: 719  PPKNSNEEFNDHQKHVVDVLLNIADGDSVGTKSFEDLPAGVRPPKEGEKSRMEVVPVVLS 778

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
             I +++ + L +P DL+P D R ++   ++E++ RFP G+  L+P+++M I+D E    +
Sbjct: 779  CIQSIAHVCLRLPKDLKPNDTRNNLKNTLEEVKKRFPDGIATLDPIENMGIKDDEFKKTL 838

Query: 708  NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
             +IE LE +L ++PL++S    ++   +  K  +  +I++ K K+ D+      +ELK R
Sbjct: 839  RKIEVLESRLLSNPLHESPRLPELYDQYSEKVNLGTKIKETKKKISDAMAIMQLEELKCR 898

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             RVL++ G I+   VVQLK R AC I TGDEL+++EL+FNG FN+L   QVAA  S F+ 
Sbjct: 899  KRVLRRFGFINEAEVVQLKARVACEISTGDELMLSELLFNGFFNNLTPEQVAAALSVFVF 958

Query: 827  VDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +K+ E   L R +LAKPL+++Q  AR +A++  E KL VN +EYV+      LM+VI+ 
Sbjct: 959  EEKTKETPALTREDLAKPLREIQAQARIVAKVSQESKLAVNEEEYVQG-FHWELMEVIFE 1017

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W+ G +FA++ +MTD++EGS+IR  RRL+E L Q+  AA+ +G  +LE KF  A   +RR
Sbjct: 1018 WANGKSFADICKMTDVYEGSLIRVFRRLEECLRQMAQAAKVMGSEDLEGKFETALTKVRR 1077

Query: 946  GIMFSNSLYL 955
             I+ + SLYL
Sbjct: 1078 DIVAAQSLYL 1087


>gi|341881947|gb|EGT37882.1| CBN-MTR-4 protein [Caenorhabditis brenneri]
          Length = 1020

 Score =  854 bits (2207), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/958 (45%), Positives = 616/958 (64%), Gaps = 55/958 (5%)

Query: 32   RNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERN 91
            R    +C HEVA+P     T+ +           N E AK Y F+LD FQ+ ++ C+E N
Sbjct: 84   RTDNENCTHEVAIPPKSVFTELKK---------SNAEPAKYYPFQLDAFQKQAILCIENN 134

Query: 92   ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTG 151
            +SVLVSAHTSAGKT VA YAIA   R+KQRVIYTSP+KALSNQKYREL +EFKDVGLMTG
Sbjct: 135  QSVLVSAHTSAGKTVVATYAIAQCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTG 194

Query: 152  DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
            DVT++P+ASCLVMTTEILR MLYRGSE++KEV WV++DEIHYM+D+ERGVVWEE+II + 
Sbjct: 195  DVTINPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETIILMS 254

Query: 212  PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
              IK  FLSAT+ NA +FA+W+C +   P +VVYTD+RPTPLQH+++PVGG G+Y VV+ 
Sbjct: 255  QHIKQAFLSATIPNAREFAQWVCFIKNHPVNVVYTDYRPTPLQHFIYPVGGEGMYEVVNV 314

Query: 272  KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK---GGSGSGGSDIFKIVKMIMERK 328
            K +FRED F        +  + G    G ++G   K   GG   G S++ KI++ +    
Sbjct: 315  KGEFREDKF--------RDAMSGLSTAGDSAGSFQKRRTGGGTQGDSNVLKIIRSVASND 366

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
                IVFSFSR+ECE +A+S+  +DFN   EK  V+ V+++A+  L+ ED+NLP I  +L
Sbjct: 367  GLNCIVFSFSRKECESYAISLKDMDFNQPNEKTMVKSVYESAISQLSPEDQNLPQIMNIL 426

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLLKRGI VHHSGL+P++KE +E+LF EGLVK LFATETF+MGLNMPA+TVVFT+ +K+D
Sbjct: 427  PLLKRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFD 486

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G  +RYI SGEYIQM+GRAGRRGKDDRG  I+MVD  M  +  K ++ G   PL S FRL
Sbjct: 487  GTDNRYISSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADDAKQIIKGATDPLNSQFRL 546

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
            +Y  +LNL+ R EG      +I +SFHQFQ    +PDI KK S+ E++ AS     E E+
Sbjct: 547  TYNMVLNLL-RVEG-VAVSWIISHSFHQFQSFAKIPDINKKCSQAEKKVASFKFPWENEM 604

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV---------- 618
              Y +LK ++ +   ++M     P  ++ +L +GRL+ V+ G  D+ WGV          
Sbjct: 605  NTYVQLKEELEKTRDEIMKIQREPRNLVGFLHAGRLLSVKSGDRDFKWGVLNQFKKEVNP 664

Query: 619  ------------VVNVVKKPSAGVGTLPSRGGGYIVP----VQLPL----ISTLSKIRLS 658
                        +V + K     +    +   G+ +P    V++P+    I+ +S IRL 
Sbjct: 665  NDKNDTIYVCDMIVAIDKNRKHDITNPATLVPGFDLPKRHWVRVPMSIDRITAISAIRLK 724

Query: 659  VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
            +P D+   D    +   +    +R    +P L+P+ DM+I+  ++  LV + + L  ++ 
Sbjct: 725  IPADINTTDGEMRLDSVMTAAMNRLQGDVPLLHPITDMEIKTKDMYALVEREKSLTKRIE 784

Query: 719  AHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
             H +N+  + ++++  +Q+K +   E++ L+ + +  +     +EL NR RVL++LG++ 
Sbjct: 785  DHSMNRRDNFDELKMLYQQKMDAIKELEALEKERKGLKSTLHLEELNNRKRVLRRLGYLT 844

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
             D  +++KGR AC +   DEL++TE++  G FN LD  Q AAL SCF+  D  S    L 
Sbjct: 845  TDDSLEMKGRVACELSASDELILTEMLLKGVFNSLDVAQTAALLSCFVFQDNCSAP-KLS 903

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
             EL   L  LQE AR +A++ NECK+EV  D+YV S   P LMDV+  W  GA+F ++++
Sbjct: 904  QELQSCLSVLQEQARHVAKVSNECKMEVVEDKYVGS-FNPGLMDVVSQWVSGASFCDIVK 962

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             TD+FEGSIIR  RRL+E L ++  AA+A    +LE+KF  A ++L+R I+F+ SLYL
Sbjct: 963  TTDVFEGSIIRCLRRLEEVLREMIGAAKACANADLEQKFEDARKNLKRDIVFAASLYL 1020


>gi|402589575|gb|EJW83507.1| ATP-dependent RNA helicase DOB1 [Wuchereria bancrofti]
          Length = 924

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/920 (46%), Positives = 622/920 (67%), Gaps = 43/920 (4%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AK Y F+LD FQR ++ C++ + SVLVSAHTSAGKT VA YAIAM+ RDKQRVIYTSP+K
Sbjct: 14  AKMYEFQLDAFQREAITCIDNSHSVLVSAHTSAGKTVVALYAIAMSLRDKQRVIYTSPIK 73

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYREL +EF DVGLMTGD TL+P+ASC+VMTTEILR MLYRGSE+++EV WVIFD
Sbjct: 74  ALSNQKYRELEEEFGDVGLMTGDNTLNPDASCIVMTTEILRSMLYRGSEIMREVGWVIFD 133

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHYM+D+ERGVVWEE+II LP  +  VFLSAT+ NA QFA+W+ +LH QP HV+YTD+R
Sbjct: 134 EIHYMRDKERGVVWEETIILLPDTVHYVFLSATIPNARQFADWVVYLHDQPVHVIYTDYR 193

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           P PLQH+++P GGSGLY VV+ +  FRED F +  +     ++G   + G   G+  KGG
Sbjct: 194 PVPLQHFIYPAGGSGLYEVVNMQGIFREDKFTEAMNVL--SQVGDAGQGGINRGK--KGG 249

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
           + SG   +  I++ + ER   PVI+FSFSR+ECE +A  M+ LDFNT++EK  V+++F N
Sbjct: 250 T-SGTPHVVNIIRTLKERDMIPVIIFSFSRKECEAYATQMTNLDFNTEDEKAKVKEIFVN 308

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           A+  L++ED  LP I  +LPLL RGI VHHSGLLP++KE++E+LF EGL+K LFATETFA
Sbjct: 309 AISLLSDEDSKLPEIGRVLPLLLRGIGVHHSGLLPIVKEVIEILFGEGLIKTLFATETFA 368

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
           MGLNMPA+TV+FT+ +K+DG  +R+I SGEYIQMSGRAGRRGKDDRG+ I+MVD+QM  +
Sbjct: 369 MGLNMPARTVLFTSARKFDGKDYRWITSGEYIQMSGRAGRRGKDDRGLVILMVDQQMGQD 428

Query: 490 TLKDMVL-GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             K ++  G P PL S FRL+Y  +LNL+ R EG    E +++NSF+QFQ   ALP +  
Sbjct: 429 VAKQIIKGGAPDPLNSQFRLTYNMVLNLL-RVEG-INPEFMLENSFYQFQNYDALPQLYG 486

Query: 549 KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            V + EEE ++     E E++ Y++++  I  L++ +   +T+P+ ++ +L +GRL+ + 
Sbjct: 487 NVERKEEELSAYKIDKETEISGYYQMEKQIDVLKEVIKEVVTKPKHLVPFLQAGRLLHIV 546

Query: 609 EGGTDWGWGVVVNVVKK--PSAGVG------------------------------TLPSR 636
             G D+GW  +++  KK  P   +G                                  +
Sbjct: 547 SNGKDFGWAALLDFHKKANPVDPLGLDVMYVLDVLMLLSSESAKNLSDITQLRPPNANEK 606

Query: 637 GGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
           G   +V V +  +S +S  R+ +P +L+  + +QS    ++E+  RF   +P L+P+ DM
Sbjct: 607 GVVEVVSVAISCVSEISAARVKLPQNLKAYEGKQSAGRVIKEVLKRFNGIMPLLDPLNDM 666

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQ 755
           KI D  + + + +++ LE +  +HPL ++   ++I + +++K E+  E++  K++++ +Q
Sbjct: 667 KINDSVLQENIIKLQALEKRKDSHPLRENSKFDEIYKQYEKKLELEAELKVAKTELKKAQ 726

Query: 756 IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
                DELK R RVL++L + D + V+  KGR +C +   DEL++TE+MF G F +L   
Sbjct: 727 SLLQLDELKCRKRVLRRLQYCDENDVITQKGRVSCEVSAADELMLTEMMFGGIFTELATP 786

Query: 816 QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV 875
           Q+AAL SCF+  +K+     L  +L+  L+ +QE AR+IA +  E KLE++ D+YVES  
Sbjct: 787 QLAALLSCFVFEEKAG-GTKLADDLSGCLRAMQEYARRIARVTKESKLEIDEDKYVES-F 844

Query: 876 RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
           +P LMDV++ W  GA+FAE+++      GSIIR  RRL+E L ++  A++A+G  +LE +
Sbjct: 845 KPHLMDVVHAWCTGASFAEILKKQIQITGSIIRCMRRLEELLREMVGASKAIGNGDLETR 904

Query: 936 FAAASESLRRGIMFSNSLYL 955
           F  A   L+R I+F+ SLYL
Sbjct: 905 FEQARVLLKRDIVFTASLYL 924


>gi|17542826|ref|NP_501757.1| Protein MTR-4 [Caenorhabditis elegans]
 gi|2495152|sp|Q23223.1|MTR4_CAEEL RecName: Full=mRNA transport homolog 4; AltName: Full=Uncharacterized
            helicase W08D2.7
 gi|3880559|emb|CAA94235.1| Protein MTR-4 [Caenorhabditis elegans]
          Length = 1026

 Score =  852 bits (2202), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/961 (46%), Positives = 618/961 (64%), Gaps = 60/961 (6%)

Query: 32   RNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERN 91
            R    +C HEVA+P      +     GT        E AK Y F+LD FQ+ ++ C++ N
Sbjct: 89   RTDNENCTHEVAIPPNAEFAELRENSGT--------EPAKYYPFQLDAFQKQAILCIDNN 140

Query: 92   ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTG 151
            +SVLVSAHTSAGKT VA YAIA   R+KQRVIYTSP+KALSNQKYREL +EFKDVGLMTG
Sbjct: 141  QSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTG 200

Query: 152  DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
            DVTL+P+ASCLVMTTEILR MLYRGSE++KEV WV++DEIHYM+D+ERGVVWEE+II + 
Sbjct: 201  DVTLNPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETIILMS 260

Query: 212  PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
              IK  FLSAT+ NA QFA+W+  + +QP +VVYTD+RPTPLQH+++PVGG G+Y VV+ 
Sbjct: 261  KNIKQAFLSATIPNARQFAQWVASIKQQPVNVVYTDYRPTPLQHWIYPVGGEGMYEVVNV 320

Query: 272  KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK---GGSGSGGSDIFKIVKMIMERK 328
            K +FRED F        +  + G    G ++G   K   GG   G S++ KI++ +    
Sbjct: 321  KGEFREDKF--------RDAMSGLATAGDSAGSFNKRRTGGGTQGDSNVLKIIRSVASND 372

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
                IVFSFSR+ECE +A+S+  +DFN   EK  V+ V+++A+  L+ ED+ LP I  +L
Sbjct: 373  GLNCIVFSFSRKECESYAISLKDMDFNKDHEKGMVKSVYESAIAQLSPEDQKLPQILNIL 432

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RGI VHHSGL+P++KE +E+LF EGLVK LFATETF+MGLNMPA+TVVFT+ +K+D
Sbjct: 433  PLLRRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFD 492

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G  +RYI SGEYIQM+GRAGRRGKDDRG  I+MVD  M  +  K ++ G   PL S FRL
Sbjct: 493  GSDNRYITSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADDAKQIIKGATDPLNSQFRL 552

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
            +Y  +LNLM R EG      +I NSFHQFQ    +P+I KK  ++E + AS +   E E+
Sbjct: 553  TYNMVLNLM-RVEG-MAVSWIINNSFHQFQSYAKIPEIDKKCVQVERKIASFNFPWENEM 610

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--- 625
                 L+  +    ++++     P+ ++ +L +GRL KV+ G  D+ WG ++N  KK   
Sbjct: 611  RTLVDLQDQLEATRQRIIQIQREPKYIVGFLHAGRLFKVKSGDRDFKWG-ILNQFKKEQN 669

Query: 626  ---------------------------PSAGVG--TLPSRGGGYI-VPVQLPLISTLSKI 655
                                       P+  V    LP R   +I VP+ +  I+ +S +
Sbjct: 670  PDDRNDQIYLCDMMIAINTEGRFDPTNPATLVPGFDLPKR--RWIRVPMTIDRITAISAV 727

Query: 656  RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
            RL VP D+   D +  +   +     RF   +P L+P++DM+I+  E+ +L+ + + LE 
Sbjct: 728  RLKVPADIDKPDGQMRLDGMMAAATKRFGNQIPLLDPIQDMEIKTVEMKELIAREKSLEG 787

Query: 716  KLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
            +L  H + K  +   + + F++K +   E+  LK++ +  Q     +EL NR RVL++LG
Sbjct: 788  RLETHSMTKRDNMKDLKKQFEQKQDAVKELNALKAERKSVQSTLHLEELNNRKRVLRRLG 847

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
            ++  D  + LKG  AC +   DEL++TE++  G FN LD  Q AAL SCF+  DK +   
Sbjct: 848  YLGNDDALVLKGSVACELSASDELILTEMLLKGIFNTLDVAQTAALLSCFVFQDKCAAP- 906

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             L  EL   L +L E AR +A++ NECK+EV  D+YV S+  P LMDV+Y W  GATF+E
Sbjct: 907  KLATELQTCLSELHEQARNVAKVSNECKMEVMEDKYV-SSFNPGLMDVVYQWVNGATFSE 965

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +++ TD+FEGSIIR+ RRL+E L ++  AA+A+    LE+KF  A ++L+R I+F+ SLY
Sbjct: 966  IVKTTDVFEGSIIRTLRRLEEVLREMINAAKALANKELEQKFEDARKNLKRDIVFAASLY 1025

Query: 955  L 955
            L
Sbjct: 1026 L 1026


>gi|341894795|gb|EGT50730.1| hypothetical protein CAEBREN_32645 [Caenorhabditis brenneri]
          Length = 1023

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/961 (45%), Positives = 617/961 (64%), Gaps = 58/961 (6%)

Query: 32   RNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERN 91
            R    +C HEVA+P     T+ +           N E AK Y F+LD FQ+ ++ C+E N
Sbjct: 84   RTDNENCTHEVAIPPKSVFTELKK---------SNAEPAKYYPFQLDAFQKQAILCIENN 134

Query: 92   ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTG 151
            +SVLVSAHTSAGKT VA YAIA   R+KQRVIYTSP+KALSNQKYREL +EFKDVGLMTG
Sbjct: 135  QSVLVSAHTSAGKTVVATYAIAQCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTG 194

Query: 152  DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
            DVT++P+ASCLVMTTEILR MLYRGSE++KEV WV++DEIHYM+D+ERGVVWEE+II + 
Sbjct: 195  DVTINPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVVWEETIILMS 254

Query: 212  PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
              IK  FLSAT+ NA +FA+W+C +  QP +VVYTD+RPTPLQH+++PVGG G+Y VV+ 
Sbjct: 255  QHIKQAFLSATIPNAREFAQWVCFIKNQPVNVVYTDYRPTPLQHFIYPVGGEGMYEVVNV 314

Query: 272  KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK---GGSGSGGSDIFKIVKMIMERK 328
            K +FRED F        +  + G    G ++G   K   GG   G S++ KI++ +    
Sbjct: 315  KGEFREDKF--------RDAMSGLSTAGDSAGSFQKRRTGGGTQGDSNVLKIIRSVASND 366

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
                IVFSFSR+ECE +A+S+  +DFN   EK  V+ V+++A+  L+ ED+NLP I  +L
Sbjct: 367  GLNCIVFSFSRKECESYAISLKDMDFNQPNEKTMVKSVYESAISQLSPEDQNLPQIMNIL 426

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLLKRGI VHHSGL+P++KE +E+LF EGLVK LFATETF+MGLNMPA+TVVFT+ +K+D
Sbjct: 427  PLLKRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFD 486

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G  +RYI SGEYIQM+GRAGRRGKDDRG  I+MVD  M  +  K ++ G   PL S FRL
Sbjct: 487  GTDNRYISSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADDAKQIIKGATDPLNSQFRL 546

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
            +Y  +LNL+ R EG      +I +SFHQFQ    +PDI KK S+ E++ AS     E E+
Sbjct: 547  TYNMVLNLL-RVEG-VAVSWIISHSFHQFQSFAKIPDINKKCSQAEKKVASFKFPWENEM 604

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV---------- 618
              Y +LK ++ +   ++M     P  ++ +L +GRL+ V+ G  D+ WGV          
Sbjct: 605  NTYVQLKEELEKTRDEIMKIQREPRNLVGFLHAGRLLSVKSGDRDFKWGVLNQFKKEVNP 664

Query: 619  ------------VVNVVKKPSAGVGTLPSRGGGYIVP----VQLPL----ISTLSKIRLS 658
                        +V + K     +    +   G+ +P    V++P+    I+ +S IRL 
Sbjct: 665  NDKNDTIYVCDMIVAIDKNRKHDITNPATLVPGFDLPKRHWVRVPMSIDRITAISAIRLK 724

Query: 659  VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
            +P D+   D    +   +    +R    +P L+P+ DM+I+  ++  LV + + L  ++ 
Sbjct: 725  IPADINTTDGEMRLDSVMTAAMNRLQGDVPLLHPITDMEIKTKDMYALVEREKSLTKRIE 784

Query: 719  AHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
             H +N+  + ++++  +Q+K +   E++ L+ + +  +     +EL NR RVL++LG++ 
Sbjct: 785  DHSMNRRDNFDELKMLYQQKMDAIKELEALEKERKGLKSTLHLEELNNRKRVLRRLGYLT 844

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
             D  +++KGR AC +   DEL++TE++  G FN LD  Q AAL SCF+  D  S    L 
Sbjct: 845  TDDSLEMKGRVACELSASDELILTEMLLKGVFNSLDVAQTAALLSCFVFQDNCSAP-KLS 903

Query: 838  MELAKPLQQLQ---ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             EL   L  LQ   E AR +A++ NECK+EV  D+YV S   P LMDV+  W  GA+F +
Sbjct: 904  QELQSCLSVLQVSSEQARHVAKVSNECKMEVVEDKYVGS-FNPGLMDVVSQWVSGASFCD 962

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +++ TD+FEGSIIR  RRL+E L ++  AA+A    +LE+KF  A ++L+R I+F+ SLY
Sbjct: 963  IVKTTDVFEGSIIRCLRRLEEVLREMIGAAKACANADLEQKFEDARKNLKRDIVFAASLY 1022

Query: 955  L 955
            L
Sbjct: 1023 L 1023


>gi|226287855|gb|EEH43368.1| ATP-dependent RNA helicase DOB1 [Paracoccidioides brasiliensis Pb18]
          Length = 1079

 Score =  849 bits (2194), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 463/973 (47%), Positives = 634/973 (65%), Gaps = 64/973 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y        H    +P      AKT+SF LDPFQ+VS+A +ER ES
Sbjct: 120  LSHQVRHQVALPPDYPYVPISE-HKPPESP------AKTWSFTLDPFQQVSIASIERGES 172

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA + R+ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 173  VLVSAHTSAGKTVVAEYAIAQSLRNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 232

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 233  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 292

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H QPCHVVYTDFRP+  +  +  +   G++L+VDEK 
Sbjct: 293  VRYVFLSATIPNAMQFAEWITKMHNQPCHVVYTDFRPSIFRCLI--IYPDGIHLIVDEKG 350

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG-------SGSGGSDIFKIVKMIME 326
             FRE+NF K  ++ + +K G    N  A  +               G SDIFKIV+MI+ 
Sbjct: 351  VFREENFHKAMES-IAEKQGEDPANPMAKRKGKGKDKKINKGEGSKGPSDIFKIVRMIVM 409

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            + + PVIVFSFS+RECE  A+ MSK+ FN + EKD V +VF +A++ L++ED+ LP I+ 
Sbjct: 410  KNYNPVIVFSFSKRECEAFALQMSKMAFNDESEKDMVSKVFNSAIEMLSDEDKELPQIKH 469

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL+ GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVFT+V+K
Sbjct: 470  ILPLLRLGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRK 529

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG S R+I   E++QMSGRAGRRG DDRGI I+M++E+M+    K++V G+   L S F
Sbjct: 530  FDGVSQRWITPSEFVQMSGRAGRRGLDDRGIVIMMINEEMDPTVAKEIVRGEQDKLNSAF 589

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS--KLEEEAASLDASG 564
             L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K V   +LE+E AS+  + 
Sbjct: 590  HLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVAGLEKAVELVELEKEHASMVIAD 647

Query: 565  EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV- 623
            E  + EY++L+ +IA     + S IT P   L Y+  GRL++++    D+GWG VVN   
Sbjct: 648  EGTIREYYELRQNIATYTSDMQSVITLPNYCLRYMQVGRLVQIQYMDYDFGWGAVVNYQR 707

Query: 624  KKPSAGV-----------------------------------GTLPSRGGGY----IVPV 644
            +KP                                       G  P++ GG     ++PV
Sbjct: 708  RKPPRNSPNEQYPPHESYVVDVLLPISEDSAFTTKTIEPLPPGIRPTQPGGKVRLEVIPV 767

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             L  I T+S IRL +P DL+    R  I   + E++ RFP G+P ++P++DM I D    
Sbjct: 768  LLYCIKTISHIRLRLPQDLKQASTRNGIHRHIMEVQRRFPDGVPLIDPIEDMGIRDDSFK 827

Query: 705  DLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
             L+ +IE LE +L ++PL N  +  +    +  K E+  +I+  K K+ ++      DEL
Sbjct: 828  KLLRKIEVLESRLLSNPLHNSPRLPDLYDQYAAKTELASKIKATKKKITEAMSIIQLDEL 887

Query: 764  KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
            K R RVL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA+ S 
Sbjct: 888  KCRKRVLRRFQFINEAEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAVLSV 947

Query: 824  FIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  + S E   + + ELAKPL+ +Q  AR IA++  E KL VN DEYV+   R  LM+V
Sbjct: 948  FVFEETSKETPPISKEELAKPLRDIQAQARVIAKVSQESKLTVNEDEYVKG-FRWELMEV 1006

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            IY W+KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LEKKF  + E 
Sbjct: 1007 IYEWAKGKSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSEDLEKKFEKSLEM 1066

Query: 943  LRRGIMFSNSLYL 955
            ++R I+ + SLYL
Sbjct: 1067 VKRDIVAAQSLYL 1079


>gi|258568318|ref|XP_002584903.1| ATP-dependent RNA helicase DOB1 [Uncinocarpus reesii 1704]
 gi|237906349|gb|EEP80750.1| ATP-dependent RNA helicase DOB1 [Uncinocarpus reesii 1704]
          Length = 1071

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/968 (46%), Positives = 629/968 (64%), Gaps = 56/968 (5%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P  Y      A H     P      A+T+ F LDPFQ+VS+A +ER+ES
Sbjct: 114  LSHQVRHQVALPPNYPYVPISA-HKPPEKP------ARTWPFTLDPFQQVSIASIERDES 166

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 167  VLVSAHTSAGKTVVAEYAIAHCLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 226

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 227  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 286

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI   H QPCHVVYTDFRPTPLQHY+FP GG G+ LVVDEK 
Sbjct: 287  VRYVFLSATIPNAMQFAEWITKTHGQPCHVVYTDFRPTPLQHYLFPAGGEGIRLVVDEKG 346

Query: 274  QFREDNFVKLQDTFLKQK-----IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
             FRE+NF K       +K         R  GK   +    G   G SD+FKIV+MIM + 
Sbjct: 347  GFREENFQKAMGEIADKKGDDPADTNARGKGKGKNKKTNKGGEKGPSDVFKIVRMIMMKS 406

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + PVIVFSFS+RECE HA+++  L FN   EKD V +VF +A++ L++ED+ LP I  +L
Sbjct: 407  YNPVIVFSFSKRECEAHALTLKNLTFNDDSEKDMVSKVFNSAIEMLSDEDKKLPQIVNLL 466

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL+RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMPAKTVVFT V+K+D
Sbjct: 467  PLLRRGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTVVFTNVRKFD 526

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G S R++   E++QMSGRAGRRG DDRGI I+MV+E+M+   +K++V G+   L S F L
Sbjct: 527  GTSQRWLTPSEFVQMSGRAGRRGLDDRGIVIMMVNEEMDPTVVKEIVRGEQDKLNSAFYL 586

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNL+ R EG  + E +++  F QFQ   ++  + K++ +LE +  ++    E  +
Sbjct: 587  GYNMILNLL-RVEG-VSPEFMLERCFAQFQSASSVGTLEKELEELESQRKNIIIPDEGTI 644

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--- 625
             EY+  +  +A   +++   I +P+    +L SGRL+ V+    D+GWG+VVN  ++   
Sbjct: 645  REYYDSRQLLATYNEEMRLTICKPDYCQRFLDSGRLVNVQHEKHDFGWGLVVNFQQRKAP 704

Query: 626  --------PSAGV------------------------GTLPSRGGG----YIVPVQLPLI 649
                    P   +                        G  P++ G      +VP+ L  I
Sbjct: 705  RSMQEEYPPHESIIVDVLLNVAENAHFSYKSDQMLPPGVRPAKKGENSTMAVVPMVLSCI 764

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
               S +R+++P +L+  D+++     + E++ RFP G+P L+P+ +M I++      + +
Sbjct: 765  KAFSTMRITLPKELKSDDSKKYTAKVLAEVQRRFPDGIPVLDPINEMGIKEEGFKRTLRK 824

Query: 710  IEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            +E +E +L A+PL+ S    ++   +  K E+ ++I+  K ++  +      DELK R R
Sbjct: 825  VEVVEARLLANPLHNSPRLPELYDQYATKVELGNKIKDTKRQISVAMSIIQLDELKCRKR 884

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++   I+   VVQLK R AC I +GDEL+++EL+FNG FN L   Q AA+ S F+  +
Sbjct: 885  VLRRFQFINESEVVQLKARVACEISSGDELMLSELLFNGFFNTLTPEQCAAVLSVFVFEE 944

Query: 829  KSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
            KS E   +   ELAKPL+ +Q  AR IA++  E KL +N  EYVES  R  LM+VIY W+
Sbjct: 945  KSKETPPITNEELAKPLRDIQAQARIIAKVGQESKLAINEQEYVES-FRWELMEVIYQWA 1003

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            KG +FAE+ +MTD++EGS+IR+ RRL+E + Q+  AA+ +G  +LE KF A+   ++R I
Sbjct: 1004 KGGSFAEICKMTDVYEGSLIRTFRRLEECMRQMAQAAKVMGSSDLESKFEASLSMVKRDI 1063

Query: 948  MFSNSLYL 955
            + + SLYL
Sbjct: 1064 VAAQSLYL 1071


>gi|148907669|gb|ABR16963.1| unknown [Picea sitchensis]
          Length = 884

 Score =  847 bits (2188), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/888 (48%), Positives = 596/888 (67%), Gaps = 50/888 (5%)

Query: 114 MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGML 173
           M+ RDKQRVIYTSP+KALSNQK+RE  +EF DVGLMTGDVT++PNASCLVMTTEILR M 
Sbjct: 1   MSLRDKQRVIYTSPIKALSNQKFREFSEEFSDVGLMTGDVTIAPNASCLVMTTEILRSMQ 60

Query: 174 YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
           Y+GSE+++EVAW+IFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+
Sbjct: 61  YKGSEIMREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNSRFVFLSATVPNAKEFADWV 120

Query: 234 CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG 293
             +H+QPCH++YTD+RPTPLQHY+FP GG GL+LVVDEK  FRED+F K  +        
Sbjct: 121 AKVHRQPCHIIYTDYRPTPLQHYLFPSGGDGLFLVVDEKGTFREDSFQKAVNALGAASDN 180

Query: 294 GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD 353
           G + NGK    +  G SG   SDIFKI KMIM+R++ PVIVFSFS+R+CE  AM M+KLD
Sbjct: 181 GNKRNGKWQKGLQAGKSGE-ESDIFKIAKMIMQRQYDPVIVFSFSKRDCEILAMQMAKLD 239

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
            N ++EK  V+ +F +A+D L+++D+ LP +  +LPLL+RGI VHHSGLLP++KE++E+L
Sbjct: 240 LNVEDEKKLVDTIFWSAMDSLSDDDKKLPQVSHILPLLQRGIGVHHSGLLPILKEVIEIL 299

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           FQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  R+I SGEYIQMSGRAGRRG D
Sbjct: 300 FQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEYIQMSGRAGRRGLD 359

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
            RGICI+MVDE+ME +T K MV G   PL S F LSY  +LN M   +G    E +++ S
Sbjct: 360 ARGICILMVDEKMEPSTAKLMVKGSADPLNSAFHLSYNMLLNQMRCEDGD--PETLLRQS 417

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPE 593
           F+QFQ ++ALP++ K+V  LEE+  S+    E ++ +Y+ L       +  + S +  P 
Sbjct: 418 FYQFQSDRALPNLQKRVKDLEEQRDSIMIEEEDKLKDYYSLLEQFRSFKGDIRSIVFSPR 477

Query: 594 RVLYYLGSGRLIKV--REGGTD---------WGWGVVVNVVKKPSAG------------- 629
             L +L  GRLI++    G  D           WGV+VN  +  S               
Sbjct: 478 HCLPFLQPGRLIRILSTSGEKDKLSFSQDEQLTWGVIVNFERVKSTSKDDTDVRPEDAQY 537

Query: 630 -------------------VGTLP--SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDA 668
                              V T+P    G   +V V L  I +LS IR+ +P DL  ++A
Sbjct: 538 TIDILTKCRANKDNSRGKIVQTVPLTEPGEPLVVAVPLSQIDSLSAIRIYIPKDLLSVEA 597

Query: 669 RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD- 727
           R++ L  VQE+ +RFP G+  L+P  DM+++       V +IE LE  L  H ++KS   
Sbjct: 598 RENTLKKVQEVLNRFPDGVQLLDPEDDMQVQSSSYKKAVRRIETLEGLLAKHVVSKSPIL 657

Query: 728 ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
           + +++  ++K E+   ++  + ++R S    F+DELK R RVL++LG+  +D VV+LKG+
Sbjct: 658 QKRLQVLRKKEELTAMVRAARRQVRASTSLAFKDELKARKRVLRRLGYATSDDVVELKGK 717

Query: 788 AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
            AC I + DEL +TELMF+G F D    Q+ +L SCF+  +K  ++  +R +L   L  L
Sbjct: 718 VACEISSADELALTELMFSGVFKDATVEQLVSLLSCFVWQEKLKDRPKIREDLESLLSHL 777

Query: 848 QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
            + AR+I ++Q ECK++++V+ YV S  RP +M+ +Y W+KGA F EV+++T++FEGS+I
Sbjct: 778 HDIARRIGKVQLECKVQIDVEAYVNS-FRPDVMEAVYAWAKGAKFYEVMKITEVFEGSLI 836

Query: 908 RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           R+ RRL+E L QL  A+++VGEV LE KF  A   ++R I+F+ SLYL
Sbjct: 837 RAIRRLEEVLQQLVLASKSVGEVQLELKFQEAITRIKRDIVFAASLYL 884


>gi|384247805|gb|EIE21291.1| antiviral helicase [Coccomyxa subellipsoidea C-169]
          Length = 1002

 Score =  847 bits (2187), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/967 (46%), Positives = 610/967 (63%), Gaps = 58/967 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            ++C H VA P      +D     +   P   G  AK + F LDPFQR ++ CLE  +SVL
Sbjct: 47   KTCTHAVAWP------EDAKTPNSQPPPARPGPAAKQFPFTLDPFQRTAINCLEAGDSVL 100

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            V+AHTSAGKT +A+Y  AM  RD QRVIYTSPLKALSNQKYRE H+EF+DVGLMTGDVT+
Sbjct: 101  VAAHTSAGKTVIAQYCCAMGLRDNQRVIYTSPLKALSNQKYREFHEEFQDVGLMTGDVTI 160

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +PNASCLVMTTEILR MLY GSE+++E A V++DEIHY++DRERGVVWEESI+  PP ++
Sbjct: 161  NPNASCLVMTTEILRSMLYNGSEIVREAALVVYDEIHYLRDRERGVVWEESIVLAPPTVR 220

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
              FLSAT+ NA +FA+WI   H  PCHVVYTD+RPTPLQH+VFP GG GL++VVD++  F
Sbjct: 221  FAFLSATIPNALEFAQWIAKTHGSPCHVVYTDYRPTPLQHFVFPTGGDGLFMVVDDRGTF 280

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
            REDNF K      +    G  + G   G +         SDIFK+VKMIM+R F PVIVF
Sbjct: 281  REDNFQKAVAALAETAADGGGKKGGKKGGVNGKKEEE--SDIFKLVKMIMQRNFDPVIVF 338

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            SFS++ECE  A+ M+ LD N + E+  VE +F NA+DCL+E+DR LP +  +LP+LKRGI
Sbjct: 339  SFSKKECEALALQMAPLDLNDEAEQKLVEGIFWNAIDCLSEDDRRLPQVGALLPMLKRGI 398

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             VHHSGLLP++KE++E++FQE L+K LFATETF+ GLNMPAKTVVFT  +K+DG   R++
Sbjct: 399  GVHHSGLLPILKEVIEIMFQENLLKVLFATETFSTGLNMPAKTVVFTNARKFDGGGFRWL 458

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEYIQMSGRAGRRG DDRGI ++M+D +ME    K MV G P  L S F LS+   + 
Sbjct: 459  SSGEYIQMSGRAGRRGLDDRGIVMLMLDTRMEPAVAKSMVQGAPDTLHSEFHLSH--TML 516

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L          E +++ SF QFQ E++LP +  +++ L+EE  ++    E  VA+Y  L 
Sbjct: 517  LNLLLSEALEPEALLRQSFRQFQTERSLPALRARIAALQEERDAVVVEEEESVAQYAALL 576

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG-----WGVVVNVVKKPSAGV 630
                Q    +   +TRP   L +L  GRL       +  G     W  V+N  ++  A  
Sbjct: 577  EQQVQCRGDMREIVTRPRYALPFLQPGRLTNGVASTSGRGEGSAVWAAVINFERQGKADA 636

Query: 631  G---------------------------TLP------------SRGGGY--IVPVQLPLI 649
            G                           ++P            +R GG   +VPVQL  +
Sbjct: 637  GEAEAKSGSSSKKGARYIVDVLANCAEDSVPGHGPKRRPVLVGARSGGVACVVPVQLGEL 696

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
            +  S +R+ VP DLRP DAR   L AV E+E R+P+GLP L+  +DM ++DP       +
Sbjct: 697  AAFSSVRIYVPKDLRPPDARTLALKAVGEVERRYPKGLPLLSAEEDMSVDDPAYRKAQRK 756

Query: 710  IEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            +E +E  L  H L  + D E+++  + RK  +  +++  K + + +     + ELK R R
Sbjct: 757  LENVEGLLSKHSLASAPDLEDRLAAWDRKQALASQVRVAKREAKSAASLILQQELKARRR 816

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++LG++D +GVV LKGR A  I + DEL++TEL+FN  F DL   Q  AL +C +  +
Sbjct: 817  VLRRLGYVDENGVVTLKGRVAATIQSADELVLTELIFNSGFKDLKPEQAVALVACLVWRE 876

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            KS     +  EL  P+  L+E+AR++A++  + K+ ++V+EYV S  R  L D +  WSK
Sbjct: 877  KSDAAPRVSEELEGPVAALREAARRVAKVSADSKMGLDVEEYVAS-FRTDLCDALAAWSK 935

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            GA FA++++MTD+FEGS++R+ RR++E L Q  A AQ +GE+ L + F      ++R I+
Sbjct: 936  GAKFADIMKMTDVFEGSLVRAVRRVEEVLRQATAGAQVMGELQLVELFEEGQRRIKRDIV 995

Query: 949  FSNSLYL 955
            F+ SLYL
Sbjct: 996  FAASLYL 1002


>gi|350854524|emb|CAY19106.2| helicase, putative [Schistosoma mansoni]
          Length = 1074

 Score =  843 bits (2177), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/999 (44%), Positives = 638/999 (63%), Gaps = 93/999 (9%)

Query: 12   APEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGY---ALTKDEAIHGTFANPVYNGE 68
            AP   +H   +PE            +C HEVAVP       +TKD             G 
Sbjct: 114  APRIQIHKISSPE------------TCTHEVAVPPDIEYKPITKD------------CGF 149

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
             AKT+ F LD FQ+ ++ C++ N+SVL+SAHTSAGKT VAEYAIA A R+KQRVIYT+P+
Sbjct: 150  PAKTFPFTLDAFQQQAIICIDNNQSVLLSAHTSAGKTVVAEYAIATALREKQRVIYTTPI 209

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQKYRE  + F +VGL+TGD T++P+AS L+MTTEIL+ MLY+G+ +++EV WVIF
Sbjct: 210  KALSNQKYREFFEAFPEVGLLTGDATINPSASVLIMTTEILQSMLYKGASMVREVGWVIF 269

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DEIHYM+D ERGVVWEE+I+ LP +++ VFLSAT+ NA QFAEWI HLH QPCHVV +D 
Sbjct: 270  DEIHYMRDPERGVVWEETIVLLPDSVRYVFLSATIPNARQFAEWIAHLHHQPCHVVSSDC 329

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            RP PL+HY++PVG  GL+LV+DE  ++ E NF +   +FL  +   +R+  +        
Sbjct: 330  RPVPLRHYLYPVGSEGLFLVLDEG-KYLEQNFERAMRSFLSDESSNKRQKSQVD------ 382

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
             +    +++ +IV+++  R  +P+IVFSFS++ECE +A+ ++K DF T  EK  V++VF+
Sbjct: 383  YNKRSENNVIQIVRLVKHRSLEPIIVFSFSKKECEIYALQLAKFDFTTDAEKKVVDEVFR 442

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            NA+D L+ EDR LP +E +LPLLKRGI +HH GLLP++KE +E+LF E L+K LFATETF
Sbjct: 443  NAIDGLSPEDRALPQVESVLPLLKRGIGIHHGGLLPLLKETIEILFSENLIKCLFATETF 502

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
            AMGLNMPA+TV+FT+ +K+DG S+R+I SGEYIQMSGRAGRRGKDD G  I+MVDE+M  
Sbjct: 503  AMGLNMPARTVLFTSARKYDGQSYRWITSGEYIQMSGRAGRRGKDDSGTVILMVDERMTS 562

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
                 +++G P PL S F ++Y  +LNL+ R E +   E++++ SF QFQ   +LP++ K
Sbjct: 563  ELAHQIMMGPPPPLNSAFHITYNMLLNLL-RVE-EINPEYMMERSFCQFQNFSSLPNMYK 620

Query: 549  KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            ++++L    AS     E  V  YH+++L   +L  +    I RP+ ++ +L  GRL+K+ 
Sbjct: 621  ELNELRATYASTVVDDEESVESYHQIQLCFDELVGQQWQYIRRPQYIVPFLQPGRLVKIV 680

Query: 609  EGGTDWGWGVVVNVVKK-----------------------------------PSA----- 628
                 +GWG V+N+ K+                                   PS      
Sbjct: 681  VQSISYGWGAVINLKKRQRKDRSSTPESFYILDCLLCNNPSRSDSDESGSDVPSGNPVDN 740

Query: 629  ----------GVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
                      G  TLP      I+PV+L  +  +S +RL VP DLR  +ARQ +L A+++
Sbjct: 741  LGITNSVTPTGSDTLPM---AEIIPVRLDCVVGISAVRLVVPNDLRSKEARQGVLNAIEK 797

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRK 737
            ++ R    LP L+P+ DM I DP  +++  ++   + +L  H L+     +++ + +++K
Sbjct: 798  VKVRMGGSLPVLDPIADMHISDPRFLEINEKVTAFQERLQHHWLHDDPRLSELSKVYRKK 857

Query: 738  AEVNHEIQQLKSKMRDSQIQKFR-DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
             ++   I  L + + +S++   + +EL  R RVL++L  +    V++LKG  AC I + D
Sbjct: 858  EQLRKRIDALTANL-NSKVSLIQLEELSARKRVLRRLNFVSEYDVIELKGCVACEITSAD 916

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            ELL+TEL+F+G FN L    +AAL SCF+  +++SE   L  EL+  L+ LQ++AR+IA 
Sbjct: 917  ELLLTELLFDGVFNRLSSEHIAALLSCFVFEERASEMPKLTKELSDALRTLQDTARRIAR 976

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            I NEC+L V+ D YV+S  +P LMD++  W++GA+FA V  MTD+FEG+IIR+ R L+E 
Sbjct: 977  ISNECRLPVDEDNYVDS-FKPHLMDLVDAWTRGASFASVCSMTDLFEGTIIRTLRLLEEL 1035

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L Q+  AA+ +G   LEKKF  A E ++R I+F+ SLYL
Sbjct: 1036 LRQMANAARTIGSNVLEKKFVEAIEKIKRDIVFAASLYL 1074


>gi|256062195|ref|XP_002570288.1| helicase [Schistosoma mansoni]
          Length = 1074

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/999 (44%), Positives = 637/999 (63%), Gaps = 93/999 (9%)

Query: 12   APEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGY---ALTKDEAIHGTFANPVYNGE 68
            AP   +H   +PE            +C HEVAVP       +TKD             G 
Sbjct: 114  APRIQIHKISSPE------------TCTHEVAVPPDIEYKPITKD------------CGF 149

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
             AKT+ F LD FQ+ ++ C++ N+SVL+SAHTSAGKT VAEYAIA A R+KQRVIYT+P+
Sbjct: 150  PAKTFPFTLDAFQQQAIICIDNNQSVLLSAHTSAGKTVVAEYAIATALREKQRVIYTTPI 209

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQKYRE  + F +VGL+TGD T++P+AS L+MTTEIL+ MLY+G+ +++EV WVIF
Sbjct: 210  KALSNQKYREFFEAFPEVGLLTGDATINPSASVLIMTTEILQSMLYKGASMVREVGWVIF 269

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DEIHYM+D ERGVVWEE+I+ LP +++ VFLSAT+ NA QFAEWI HLH QPCHVV +D 
Sbjct: 270  DEIHYMRDPERGVVWEETIVLLPDSVRYVFLSATIPNARQFAEWIAHLHHQPCHVVSSDC 329

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            RP PL+HY++PVG  GL+LV+DE  ++ E NF +   +FL  +   +R+  +        
Sbjct: 330  RPVPLRHYLYPVGSEGLFLVLDEG-KYLEQNFERAMRSFLSDESSNKRQKSQVD------ 382

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
             +    +++ +IV+++  R  +P+IVFSFS++ECE +A+ ++K DF T  EK  V++VF+
Sbjct: 383  YNKRSENNVIQIVRLVKHRSLEPIIVFSFSKKECEIYALQLAKFDFTTDAEKKVVDEVFR 442

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            NA+D L+ EDR LP +E +LPLLKRGI +HH GLLP++KE +E+LF E L+K LFATETF
Sbjct: 443  NAIDGLSPEDRALPQVESVLPLLKRGIGIHHGGLLPLLKETIEILFSENLIKCLFATETF 502

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
            AMGLNMPA+TV+FT+ +K+DG S+R+I SGEYIQMSGRAGRRGKDD G  I+MVDE M  
Sbjct: 503  AMGLNMPARTVLFTSARKYDGQSYRWITSGEYIQMSGRAGRRGKDDSGTVILMVDESMTS 562

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
                 +++G P PL S F ++Y  +LNL+ R E +   E++++ SF QFQ   +LP++ K
Sbjct: 563  ELAHQIMMGPPPPLNSAFHITYNMLLNLL-RVE-EINPEYMMERSFCQFQNFSSLPNMYK 620

Query: 549  KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            ++++L    AS     E  V  YH+++L   +L  +    I RP+ ++ +L  GRL+K+ 
Sbjct: 621  ELNELRATYASTVVDDEESVESYHQIQLCFDELVGQQWQYIRRPQYIVPFLQPGRLVKIV 680

Query: 609  EGGTDWGWGVVVNVVKK-----------------------------------PSA----- 628
                 +GWG V+N+ K+                                   PS      
Sbjct: 681  VQSISYGWGAVINLKKRQRKDRSSTPESFYILDCLLCNNPSRSDSDESGSDVPSGNPVDN 740

Query: 629  ----------GVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
                      G  TLP      I+PV+L  +  +S +RL VP DLR  +ARQ +L A+++
Sbjct: 741  LGITNSVTPTGSDTLPM---AEIIPVRLDCVVGISAVRLVVPNDLRSKEARQGVLNAIEK 797

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRK 737
            ++ R    LP L+P+ DM I DP  +++  ++   + +L  H L+     +++ + +++K
Sbjct: 798  VKVRMGGSLPVLDPIADMHISDPRFLEINEKVTAFQERLQHHWLHDDPRLSELSKVYRKK 857

Query: 738  AEVNHEIQQLKSKMRDSQIQKFR-DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
             ++   I  L + + +S++   + +EL  R RVL++L  +    V++LKG  AC I + D
Sbjct: 858  EQLRKRIDALTANL-NSKVSLIQLEELSARKRVLRRLNFVSEYDVIELKGCVACEITSAD 916

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            ELL+TEL+F+G FN L    +AAL SCF+  +++SE   L  EL+  L+ LQ++AR+IA 
Sbjct: 917  ELLLTELLFDGVFNRLSSEHIAALLSCFVFEERASEMPKLTKELSDALRTLQDTARRIAR 976

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            I NEC+L V+ D YV+S  +P LMD++  W++GA+FA V  MTD+FEG+IIR+ R L+E 
Sbjct: 977  ISNECRLPVDEDNYVDS-FKPHLMDLVDAWTRGASFASVCSMTDLFEGTIIRTLRLLEEL 1035

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L Q+  AA+ +G   LEKKF  A E ++R I+F+ SLYL
Sbjct: 1036 LRQMANAARTIGSNVLEKKFVEAIEKIKRDIVFAASLYL 1074


>gi|406695203|gb|EKC98515.1| hypothetical protein A1Q2_07197 [Trichosporon asahii var. asahii CBS
            8904]
          Length = 1065

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 456/976 (46%), Positives = 618/976 (63%), Gaps = 91/976 (9%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L     H+VA+P G+        H     P      A+TY FELDPFQ V+ +C+ER+E+
Sbjct: 127  LVHEVRHQVAIPPGFPYVPISQ-HKRLDPP------ARTYKFELDPFQYVATSCIERSET 179

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTG 151
            VLVSAHTSAGKT VAE+AIA A +   RV+YTSP+K     K+R+  ++F  ++VGLMTG
Sbjct: 180  VLVSAHTSAGKTVVAEFAIATALKSGMRVVYTSPIK-----KFRDFQEDFGQENVGLMTG 234

Query: 152  DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
            DVT++P ASCLVMTTE++R           EV WVIFDE+HYM+D+ERGVVWEE++I LP
Sbjct: 235  DVTINPTASCLVMTTEVMR-----------EVGWVIFDEVHYMRDKERGVVWEETLILLP 283

Query: 212  PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
              ++ VFLSAT+ N+ +FAEW C  H+QPCH+VYTDFRPTPLQHY+FP G  G+YLVVDE
Sbjct: 284  HKVRCVFLSATIPNSMEFAEWWCQTHEQPCHIVYTDFRPTPLQHYLFPAGSEGIYLVVDE 343

Query: 272  KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG--------SDIFKIVKM 323
            +  FREDNF K           G+ E+             +          SDI+KIVK+
Sbjct: 344  RSNFREDNFQKAMAAL----AAGQGEDPADPNSGRNKKGKTKKGGAMKGGVSDIYKIVKL 399

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            IM R   PVI+F+FS+RECE  AM MSKLDFNT++E  TV+QVF+NA+  L+E+DR LP 
Sbjct: 400  IMSRNLNPVIIFAFSKRECEALAMQMSKLDFNTEDEAATVQQVFENAIGALSEDDRKLPQ 459

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+KALFATETF++GLNMPAKTVVFT+
Sbjct: 460  IEQILPLLKRGIGIHHGGLLPILKEVIEILFQEGLLKALFATETFSIGLNMPAKTVVFTS 519

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
            V+K+DG   R +  GEYIQMSGRAGRRG D RGI I+M DE++E    K MV G+   L 
Sbjct: 520  VRKFDGKEFRTLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPEAAKGMVKGQADRLD 579

Query: 504  STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
            S F L Y  I+NLM R EG  + E++++  F+QFQ   ++P + K++   EEE   +   
Sbjct: 580  SAFHLGYNMIINLM-RVEG-ISPEYMLERCFYQFQNSLSVPVLEKQLKAAEEERDEIKIE 637

Query: 564  GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV--- 620
             E ++AEY+ L+  +  LE    S IT P+ VL ++  GR++++R+GG D+GW VVV   
Sbjct: 638  DEDDIAEYYDLRDQLKVLEGDFKSVITHPQYVLPFMQPGRMVEIRDGGRDFGWAVVVGYN 697

Query: 621  ------------------------NVVKKPSAGV---------GTLP----SRGGGYIVP 643
                                    +V+ K ++G          G  P      G   I+ 
Sbjct: 698  KVVNPKGRPPIVTENDPPQKGYVIDVLVKVASGSQVPRDKNAEGIQPPGPGDNGETAIIG 757

Query: 644  VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
            V L  +  +S +RL +P DLR    + +   AV E++ RFP+G+  L+PV +M I+D   
Sbjct: 758  VLLSTVQAVSTVRLHLPKDLRSQSDKDTAFRAVNEVKKRFPKGIALLDPVVNMGIKDDSF 817

Query: 704  VDLV-NQIEELEHKLFAHPLNKSQDENQ-IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
              LV ++I+ L       P+  S D  Q    + RK +    ++ LK ++         +
Sbjct: 818  KKLVKDRIQTL-------PITSSPDLPQKYDEYDRKQKAIASVRSLKKRISSVHDVLQLE 870

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            ELK R RVL++LG   ++ VV++KGR AC I TGDELL+TE+MF GTFN L   Q AAL 
Sbjct: 871  ELKGRKRVLRRLGFTTSEDVVEMKGRVACEISTGDELLLTEMMFGGTFNPLTPEQCAALL 930

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            SCF+  +KS  ++ +R ELA PL+ LQE+AR+IA++ NE K+ V  DEYV+S  +  +M+
Sbjct: 931  SCFVFQEKSEAKVKIREELAAPLRVLQETARRIAKVSNESKIPVVEDEYVQS-FKVEMME 989

Query: 882  VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
             +  W KGA+FAE+ ++TD++EGSIIR  RRL E L Q+  AA A+G   LE+KF  A E
Sbjct: 990  PVLQWCKGASFAELCKLTDVYEGSIIRCFRRLQELLRQMGQAANAIGNKELEEKFTKALE 1049

Query: 942  SLRR--GIMFSNSLYL 955
             L +   I+FS SLYL
Sbjct: 1050 MLEKPNSIIFSPSLYL 1065


>gi|268537292|ref|XP_002633782.1| C. briggsae CBR-MTR-4 protein [Caenorhabditis briggsae]
          Length = 1024

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/957 (45%), Positives = 617/957 (64%), Gaps = 60/957 (6%)

Query: 35   TRSCVHEVAVPSGYALT--KDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
            + +C HEVA+P     T  K+ +I           E AK Y F+LD FQ+ ++ C+E NE
Sbjct: 92   SENCTHEVAIPPNGEFTPLKESSI-----------EPAKYYPFQLDAFQKQAILCIENNE 140

Query: 93   SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGD 152
            SVLVSAHTSAGKT VA YAIA   R+KQRVIYTSP+KALSNQKYREL +EFKDVGLMTGD
Sbjct: 141  SVLVSAHTSAGKTVVATYAIAQCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTGD 200

Query: 153  VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
            VT++P+ASCLVMTTEILR MLYRGSE++KEV WV++DEIHYM+D+ERGVVWEE+II +  
Sbjct: 201  VTINPDASCLVMTTEILRSMLYRGSEIIKEVGWVVYDEIHYMRDKERGVVWEETIILMSN 260

Query: 213  AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
             +K  FLSAT+ NA +FA+W+C L +QP +VVYTD+RPTPLQH+++PV G G+Y VV+ K
Sbjct: 261  HVKQAFLSATIPNAREFAQWVCSLKQQPVNVVYTDYRPTPLQHFIYPVNGEGMYEVVNVK 320

Query: 273  EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSG---SGGSDIFKIVKMIMERKF 329
             +FRED F        +  + G    G ++G   +  SG   SG S++ KI++ +     
Sbjct: 321  GEFREDKF--------RDAMSGLATAGDSAGSFNQRRSGKGTSGDSNVLKIIRSVAANDG 372

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
               IVFSFSR+ECE +A+S+  +DFN  +EK  V+ V+++A+  L+ ED+NLP I  +LP
Sbjct: 373  LNCIVFSFSRKECEAYALSLKDMDFNQPQEKLMVKSVYESAISQLSPEDQNLPQITNILP 432

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            +LKRGI VHHSGL+P++KE +E+LF EGLVK LFATETF+MGLNMPA+TVVFT+ +K+DG
Sbjct: 433  ILKRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKYDG 492

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
              +RYI SGEYIQM+GRAGRRGKDDRG  I+MVD  M     K ++ G   PL S FRL+
Sbjct: 493  TENRYISSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSAVDAKQIIKGATDPLNSQFRLT 552

Query: 510  YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
            Y  +LNLM R EG     H+I +SFHQFQ    +P I KK ++ E++  S     E E+ 
Sbjct: 553  YNMVLNLM-RVEG-MAVSHIISSSFHQFQSYAKIPGIDKKCAEAEKKINSFKFPWENEMR 610

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK----- 624
             Y  L   +A+++++++     P  ++ +L +GRL+ ++ G  D+ WG++ N  K     
Sbjct: 611  TYMDLVDHLARVKQEIVKTQREPRYIVGFLHAGRLLSIKSGDRDFKWGILHNFKKVVNPE 670

Query: 625  ------------------------KPSAGVGTLPSRGGGY-IVPVQLPLISTLSKIRLSV 659
                                     P+  +    SR   +  V + L  I+ +S IRL +
Sbjct: 671  DKNDSIFVCDMILAVEKNGKYDASNPATLLPGFDSRNRTWERVSMTLDKITAISAIRLKI 730

Query: 660  PPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA 719
             P++     ++ I  AV+    R    +P L+P+ DM I+ PE+  LV+  +  + ++  
Sbjct: 731  -PEVIDDSGKKRIDAAVKTAMERLGGEIPLLHPIDDMNIKTPEIKKLVDDEKIYKERIEN 789

Query: 720  HPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA 778
            H +NK+ D E++ + F++K E   E   LK++ +  Q     +EL NR RVL++L +++A
Sbjct: 790  HTINKAADFEDRKKQFEKKLEAIKEFDALKAERKSLQSTLHLEELTNRKRVLRRLEYLNA 849

Query: 779  DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRM 838
            D  +Q+KG+ AC +   DEL++TE++  G FN LD  Q A+L SCF+  D  +    L  
Sbjct: 850  DDSLQIKGKVACELSASDELILTEMILKGVFNPLDVAQTASLLSCFVFQDNCAAP-KLSA 908

Query: 839  ELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQM 898
             L   L +L + AR +A++ NECK+EV  D+YV S   P LMDV+  W  GA+F ++++ 
Sbjct: 909  ALQTCLTELHDQARHVAKVSNECKMEVIEDKYVNS-FNPGLMDVVSQWVSGASFNDIVRT 967

Query: 899  TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            TD+FEGSIIR  RRL+E L ++  AA+A+    LE+KF  A + L+R I+F+ SLYL
Sbjct: 968  TDVFEGSIIRCLRRLEEVLREMINAAKALSNKELEQKFEDARKMLKRDIVFAASLYL 1024


>gi|308481081|ref|XP_003102746.1| hypothetical protein CRE_29868 [Caenorhabditis remanei]
 gi|308260832|gb|EFP04785.1| hypothetical protein CRE_29868 [Caenorhabditis remanei]
          Length = 1039

 Score =  839 bits (2167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/967 (45%), Positives = 610/967 (63%), Gaps = 69/967 (7%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEVA+P      + E           NGE AK Y F+LD FQ+ ++ C++ NESVLV
Sbjct: 94   NCTHEVAIPPNSKFRQLEP---------KNGEPAKYYPFQLDAFQKQAILCIDNNESVLV 144

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VA YAIA   R+KQRVIYTSP+KALSNQKYREL +EFKDVGLMTGDVT++
Sbjct: 145  SAHTSAGKTVVATYAIAQCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTGDVTIN 204

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASCLVMTTEILR MLYRGSE++KEV WV++DEIHYM+D+ERGVVWEE+II +   +K 
Sbjct: 205  PDASCLVMTTEILRSMLYRGSEIIKEVGWVVYDEIHYMRDKERGVVWEETIILMSSNVKQ 264

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK---- 272
             FLSAT+ NA +FA+W+C + +QP +VVYTD+RPTPLQH+++PVGG G+Y VV+ K    
Sbjct: 265  AFLSATIPNAREFAQWVCSIKQQPVNVVYTDYRPTPLQHFIYPVGGEGMYEVVNVKVCLN 324

Query: 273  -----------EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK--GGSGSGGSDIFK 319
                        +FRED F           + G    G ++G   K       G S++ K
Sbjct: 325  IFLANTMNCVQGEFREDKF--------NDAMSGLATAGDSAGSFHKRRTNGTQGDSNVLK 376

Query: 320  IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
            I++ +        IVFSFSR+ECE +A+S+  +DFN   EK  V+ V+++A+  L+ ED+
Sbjct: 377  IIRSVATNDGLNCIVFSFSRKECESYAISLKDMDFNQAHEKGMVKSVYESAISQLSPEDQ 436

Query: 380  NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
            NLP I  +LPLLKRGI VHHSGL+P++KE +E+LF EGLVK LFATETF+MGLNMPA+TV
Sbjct: 437  NLPQILNILPLLKRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPARTV 496

Query: 440  VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKP 499
            VFT+ +K+DG  +RYI SGEYIQM+GRAGRRGKDDRG  I+MVD  M  +  K ++ G  
Sbjct: 497  VFTSARKFDGTDNRYISSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSSDDAKQIIKGAT 556

Query: 500  APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
             PL S FRL+Y  +LNLM R EG      +I NSFHQFQ    +P+I KK  + E++ AS
Sbjct: 557  DPLNSQFRLTYNMVLNLM-RVEG-MAVSWIINNSFHQFQSYSKIPEIDKKCVQAEKKVAS 614

Query: 560  LDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV 619
               S E ++  Y  ++  + +  + ++     P+ ++ +L SGRL+KV+ G  D+ WG++
Sbjct: 615  FKFSWETDMCTYLDVQNQLEKTRQDILKIQREPKHLVGFLHSGRLLKVKSGDRDFKWGIL 674

Query: 620  VNVVKK--------------------------PSAGVGTLP----SRGGGYIVPVQLPLI 649
                K+                          P+      P    SR     VP+    I
Sbjct: 675  NQFRKEINPNDKNDTIYVCDMIVAVKDDQKLDPTNPATLTPGFDLSRRKWIRVPMSTDRI 734

Query: 650  STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
            + +S IRL +P  +   DA+  +   +     R    +P L+P+ DM I +PE+  LV++
Sbjct: 735  TAISAIRLKIPAHIESQDAQFRLDTVMTAAMKRLGGDVPLLDPITDMDIRNPEIHVLVDR 794

Query: 710  IEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
             + L+ +L  H + N++  E+  + ++ K +   E + LK++ +  +     +EL NR R
Sbjct: 795  EKTLKSRLENHRMSNRADLEDCKKQYEVKLDAIKEFEALKAERKGLKSTLHLEELDNRKR 854

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++LG++  D  ++LKGR AC +   DEL++TE++  G FN LD  Q AAL SCF+  D
Sbjct: 855  VLRRLGYLRNDDSLELKGRVACELSASDELILTEMLLKGLFNSLDVAQTAALLSCFVFQD 914

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
              S    L  EL   L +L E AR +A++ NECK+E+  D+YV S+  P LMDV+  W  
Sbjct: 915  NCSAP-KLSSELQTCLSELHEQARHVAKVSNECKMEIVEDKYV-SSFNPGLMDVVSQWVT 972

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            GA+F E+++ TD+FEGSIIR  RRL+E L ++  AA+A     LE+KF  A ++L+R I+
Sbjct: 973  GASFNEIVKTTDVFEGSIIRCLRRLEEVLREMINAAKACANSELEQKFEEARKNLKRDIV 1032

Query: 949  FSNSLYL 955
            F+ SLYL
Sbjct: 1033 FAASLYL 1039


>gi|308805252|ref|XP_003079938.1| ATP-dependent RNA helicase, putative (ISS) [Ostreococcus tauri]
 gi|116058395|emb|CAL53584.1| ATP-dependent RNA helicase, putative (ISS) [Ostreococcus tauri]
          Length = 1018

 Score =  839 bits (2167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/993 (45%), Positives = 631/993 (63%), Gaps = 90/993 (9%)

Query: 38   CVHEVAVPSGYALTKDEAI-----HGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
            C+H+V  P   A T + +       G    P    + AK+Y FELD FQ+ +V  LER E
Sbjct: 41   CLHDVVRPKAAATTDETSTSAPRDEGAIETPT---KPAKSYPFELDTFQQKAVEVLERKE 97

Query: 93   SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGD 152
            SVLVSAHTSAGKT VAEYAIAMA RD QRV+YTSPLKALSNQKYREL +EF+DVGLMTGD
Sbjct: 98   SVLVSAHTSAGKTVVAEYAIAMAIRDGQRVVYTSPLKALSNQKYRELREEFEDVGLMTGD 157

Query: 153  VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
            V ++P+ASCLVMTTE+LR MLY+G EV++EV WVI+DEIHYM+D ERGVVWEESI+ LP 
Sbjct: 158  VVINPSASCLVMTTEVLRSMLYKGGEVMREVGWVIYDEIHYMRDSERGVVWEESIVLLPD 217

Query: 213  AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
             +K VFLSAT+ NA +FAEW+C  H QPCH+VYTDFRPTPL+HY+FP  G G++LV+D +
Sbjct: 218  MVKYVFLSATIPNAREFAEWVCKTHNQPCHIVYTDFRPTPLEHYIFPANGEGIFLVMDRQ 277

Query: 273  EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGS------DIFKIVKMIME 326
              FR+ NF +                G A+ R+A  G G  G       DIFKI++M++E
Sbjct: 278  SNFRDSNFEQAVTVISDS-------GGTAAARVANRGRGDDGKNEAVNQDIFKIIRMVVE 330

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            R + PVIVF+F++ ECE+ A S+ K+D    +EK  ++ ++ NA+D L+EED+ LP +  
Sbjct: 331  RNYDPVIVFAFNKHECEKMANSLHKVDLCDDDEKKLIDTIYWNAMDALSEEDKRLPQVAN 390

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +  LL+RG+ VHHSGLLP++KE++E+LFQEGL+K LFATET ++GLNMPA+TVVF + +K
Sbjct: 391  LPNLLRRGLGVHHSGLLPILKEVIEILFQEGLIKVLFATETMSVGLNMPARTVVFCSPRK 450

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            +DG   R+I SGEYIQMSGRAGRRGKDDRG+ I+M+DE+M+    K+M+ G+   L S F
Sbjct: 451  FDGAGFRWITSGEYIQMSGRAGRRGKDDRGLVILMMDERMDPPVAKNMLHGQSDTLDSAF 510

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
            RL+Y  ILNLM R EG    E +I++SF QFQ ++ALP I  K+ ++E+E  ++    E 
Sbjct: 511  RLNYAMILNLM-RVEGA-DPESLIQSSFAQFQNDRALPGIEAKIVEIEKERDAVHIEDEN 568

Query: 567  EVAEYHKLK--LDIAQLEKKLMSEITRPERVLYYLGSGRL------------------IK 606
             V EY KL+  LD    E+++++    P   + +L  GRL                  IK
Sbjct: 569  AVDEYVKLQDGLDAMIRERRVVTNT--PTYAVPFLQPGRLVRVCTKVPSVFNSTEEEAIK 626

Query: 607  VREGGTDWG-----WGVVVNVVKKPSAG------------VGTLPSRGGG---------- 639
            +   GT+ G     WG++V+  +    G            V T  +R G           
Sbjct: 627  IPAPGTEPGEDDVVWGMIVSFERIGGGGKSGKAAYGVDILVRTRENRNGKTPLTVKDKSE 686

Query: 640  ---YIVP-----------VQLPL--ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF 683
                ++P           ++ PL  I  +S +R+ +P DL P +AR   + +V E+  RF
Sbjct: 687  RYEIVLPNDSDESTEPRILRFPLEQIDIMSSVRVYLPKDLHPREARDQCMSSVGEVIKRF 746

Query: 684  PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNH 742
            P G+P L+  KDMKI +     L+ +IE ++  +  HP+  S+    ++   + K +++ 
Sbjct: 747  PDGVPVLDFEKDMKINNDNFAKLLKRIEGIKSMMRKHPIASSERLPEKLYAHREKRQLSI 806

Query: 743  EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
             ++Q K   + +     RD+LK   RVL++LGH  A+GVVQ KGR AC + + DEL+  E
Sbjct: 807  ALKQAKRDAKAAAGLIMRDKLKQMRRVLRRLGHTSAEGVVQTKGRVACELASVDELVTAE 866

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+FNGTF ++D   + AL SC +  ++S     L  + A+   +L+E ARK+ +   ECK
Sbjct: 867  LIFNGTFKEVDVDMLVALVSCLVWRERSRNAAKLSEKTAEVYNRLKEVARKVGKQMVECK 926

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            + V+++EYV+   R  LM+++  W KG  FAE+++MTD+FEGSI+R+ RR++E L QL  
Sbjct: 927  MHVDIEEYVDG-FRSELMEIMIAWCKGNKFAEIMKMTDLFEGSIVRAIRRVEEVLRQLAD 985

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A + +GE  L++KF  ASE ++R I+F  SL+L
Sbjct: 986  ACRVIGENELQEKFLLASEKVKRDIVFVASLFL 1018


>gi|406860781|gb|EKD13838.1| ATP-dependent RNA helicase DOB1 [Marssonina brunnea f. sp.
            'multigermtubi' MB_m1]
          Length = 1079

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/967 (46%), Positives = 630/967 (65%), Gaps = 62/967 (6%)

Query: 40   HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
            H+V++P  Y        H    +P      A+T+ FELDPFQ+V++A +ER ESVLVSAH
Sbjct: 124  HQVSLPPDYDYVPISQ-HKAPEHP------ARTWPFELDPFQKVAIASIERGESVLVSAH 176

Query: 100  TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNA 159
            TSAGKT VAEYAIA + ++ QRVIYTSP+KALSNQKYR+   +F DVGLMTGDVT++P A
Sbjct: 177  TSAGKTVVAEYAIAQSLKNNQRVIYTSPIKALSNQKYRDFAADFGDVGLMTGDVTINPTA 236

Query: 160  SCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFL 219
            +CLVMTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ RGVVWEE+II LP  ++ VFL
Sbjct: 237  TCLVMTTEILRSMLYRGSEIMREVQWVIFDEIHYMRDKARGVVWEETIILLPDKVRYVFL 296

Query: 220  SATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDN 279
            SAT+ N+ QFAEWI   H+QPCH+VYTDFRPTPLQHY FP G  G++L+VDEK  FREDN
Sbjct: 297  SATIPNSMQFAEWITKTHQQPCHIVYTDFRPTPLQHYFFPAGADGIHLIVDEKGNFREDN 356

Query: 280  FVKLQDTFLKQK------IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            F K   T   QK      I  +++    + +  KGG     +DI+KIV+MIM + + PVI
Sbjct: 357  FQKAMATIEDQKGADPADINAKQKGKGKNKKTNKGGVNDDKNDIYKIVRMIMVKHYNPVI 416

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            VFSFS+RECE +A+ MS L FN + EK  V +VF +A++ L+EED++LP I+ +LPLL+R
Sbjct: 417  VFSFSKRECEAYALKMSSLAFNDEAEKLVVTKVFNSAIESLSEEDKSLPQIQHILPLLRR 476

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMPAKTVVFT+V+K+DG S R
Sbjct: 477  GIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMPAKTVVFTSVEKFDGTSMR 536

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            Y+   E++QMSGRAGRRG D RGI I+M++++ME  T K +V G+   L S F L Y  I
Sbjct: 537  YLTPSEFVQMSGRAGRRGLDARGIVIMMINDKMEPATAKQIVRGEQDKLNSAFYLGYNMI 596

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
            LNL+ R EG  + E ++++ F+QFQ   ++  + +++  +++E  +L+ + E+ + EY+ 
Sbjct: 597  LNLI-RVEG-ISPEFMLEHCFYQFQNSSSVAGLERELVAIQQERDNLEIADESTIKEYYD 654

Query: 574  LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN------------ 621
            L+  +    K +   I  P   L ++ +GR++ ++    D+GWG VV+            
Sbjct: 655  LRQQLDSYSKDMRDVINHPNYCLQFMQAGRIVHIKFQDHDFGWGAVVSFNPIRAVKGQDQ 714

Query: 622  ---------------VVKKPSAGVGT-----LP---------SRGGGYIVPVQLPLISTL 652
                           +V   S+  GT     LP           G   +VPV L  I  +
Sbjct: 715  AEVKPQESHMLNVLLLVSSDSSTGGTQSLSALPPGIQPPTNGDPGKMEVVPVLLSCIEAI 774

Query: 653  SKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEE 712
              +RL +P DL+    R S+  A+ E++ RFP G+  L+P+++M I D     L+ +IE 
Sbjct: 775  GHVRLFLPKDLKSSGDRNSVRKALDEVKRRFPDGIAVLDPIENMGITDDSFKKLLRKIEV 834

Query: 713  LEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
            LE KL ++PL+ S    ++   +  K     +I+ +K  +  +      DELK+R RVL+
Sbjct: 835  LESKLLSNPLHNSPRLPEVYNQYIAKLAYGTKIKDMKKNITSALSIMQLDELKSRKRVLR 894

Query: 772  KLGHIDADGVVQLKGRAACLI-DTGD--ELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            +LG I+   VV+LK R AC I  TGD  ELL++EL+FN  FN+L     AA+ SCFI  +
Sbjct: 895  RLGFINDQEVVELKARVACEISSTGDGHELLLSELLFNRFFNELSPEVCAAVLSCFIFEE 954

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            KS  +  LR +LAK  +++Q  A+ IA++  E KL+VN  EY+ES  +  LM+V+ CW++
Sbjct: 955  KSRAE-PLREDLAKHYREIQSQAKVIAKVSQESKLKVNEKEYIES-FKWELMEVVLCWAE 1012

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            G +FA++ +MT+++EGS+IR  RRL+E L Q+  AA+ +G   L  KF  A   +RR I+
Sbjct: 1013 GKSFAQICKMTEVYEGSLIRLFRRLEELLRQMAQAAKVMGSDELSAKFEEALTKIRRDIV 1072

Query: 949  FSNSLYL 955
             + SLYL
Sbjct: 1073 AAQSLYL 1079


>gi|403180080|ref|XP_003338372.2| hypothetical protein PGTG_19883 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375165805|gb|EFP93953.2| hypothetical protein PGTG_19883 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 940

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/864 (51%), Positives = 577/864 (66%), Gaps = 70/864 (8%)

Query: 21  GTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPF 80
           GT EE+   +Q  L+    H+VA+P  Y      A H   + P      A+TY F LDPF
Sbjct: 84  GTGEEKP--QQLTLSHQVRHQVALPPNYNYIPISA-HRAPSKP------ARTYPFTLDPF 134

Query: 81  QRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELH 140
           Q+VS+  ++RNESVLVSAHTSAGKT VAEYAIA    +KQRVIYTSP+KALSNQKYREL 
Sbjct: 135 QQVSITSIQRNESVLVSAHTSAGKTVVAEYAIAQCLENKQRVIYTSPIKALSNQKYRELM 194

Query: 141 QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG 200
            EF DVGLMTGDVT++P+ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D+ERG
Sbjct: 195 AEFGDVGLMTGDVTINPSASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERG 254

Query: 201 VVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPV 260
           VVWEE+II LP +++ VFLSAT+ NA QFAEWICH H QPCHVVYT+FRPTPLQHY+FP 
Sbjct: 255 VVWEETIILLPHSVRYVFLSATIPNAMQFAEWICHTHDQPCHVVYTNFRPTPLQHYLFPS 314

Query: 261 GGSGLYLVVDEKEQFREDNFVKLQDTFLKQK-------IGGRRENGKASGRMAKGGSGSG 313
           GG G++LVVDEK  FREDNF+K   +    +       + GR + GK      KGG+ + 
Sbjct: 315 GGDGIHLVVDEKGVFREDNFLKAMGSLNDSRGEDPASSMSGRNKQGKTK----KGGNSTK 370

Query: 314 G-SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
           G SDI+KI+KMIM + + PVIVF+FS+RECE  A+ MSKL+FN++EEK+TV+ VF+NA+ 
Sbjct: 371 GPSDIYKIIKMIMVKNYNPVIVFAFSKRECEALAIQMSKLEFNSEEEKETVDTVFKNAIS 430

Query: 373 CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
            L+E+D+ LP IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+K LFATETF++GL
Sbjct: 431 NLSEDDQALPQIEHILPLLKRGIGIHHGGLLPILKEVIEILFQEGLIKVLFATETFSIGL 490

Query: 433 NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLK 492
           NMPAKTVVFT V+K+DG   R + SGEYIQMSGRAGRRG DDRGI I+M DEQ+E  T K
Sbjct: 491 NMPAKTVVFTTVRKFDGKDFRSLSSGEYIQMSGRAGRRGLDDRGIVIMMCDEQLEPATAK 550

Query: 493 DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
           +MV G    L S F L Y  ILNLM R EG  + E++++  F QFQ    LP +  ++ +
Sbjct: 551 NMVKGDADRLDSAFHLGYNMILNLM-RVEG-VSPEYMLEKCFFQFQTHANLPLLENELRE 608

Query: 553 LEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
           L+   + +    E  +A+Y KL+ ++    +     I  P   L +L  GRL+KV+ G  
Sbjct: 609 LQRMRSKIVVPDEESIADYAKLQEELEIRNQDFRDVINHPTHALPFLQPGRLVKVKFGTM 668

Query: 613 DWGWGVVVN-------------------------VVKKPSAGVG---TLPSR-------- 636
           D+GWG VVN                         V+ K SAG       PS+        
Sbjct: 669 DFGWGCVVNFQRRLGDRGKSLGPETKPQDSFIVDVLLKISAGKSGPKQPPSKMIGGNQTS 728

Query: 637 ----------GGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG 686
                     G   +VPV L  +  +SKIR+ +  DL+P+DAR+  L AV E++ RFP G
Sbjct: 729 LVKPCEPGEEGECAVVPVLLSTLDGISKIRIFLAQDLKPMDARKGALDAVAEVKRRFPNG 788

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQ 745
           +  L+PV++M I D     L+++IE L+  +  H +   +D  +Q + +Q K +V   I+
Sbjct: 789 IGLLDPVENMGIVDETFKKLISRIENLKESIKDHKVITQEDFHDQYKLYQEKQQVYQLIK 848

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           Q+K K+ +++   + ++LK R  VL+ LG  + D +VQ+KGR AC I +GDELL+TEL+F
Sbjct: 849 QIKQKISNAENVIYIEDLKKRKTVLRSLGFCNVDDIVQVKGRVACEISSGDELLLTELIF 908

Query: 806 NGTFNDLDHHQVAALASCFIPVDK 829
           NG FNDL   Q AAL SCF+  +K
Sbjct: 909 NGAFNDLSPEQCAALLSCFVFTEK 932


>gi|387219033|gb|AFJ69225.1| ATP-dependent RNA helicase DOB1 [Nannochloropsis gaditana CCMP526]
          Length = 1061

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/1021 (44%), Positives = 645/1021 (63%), Gaps = 85/1021 (8%)

Query: 1    MEESLMAG--KRKAPEEDLHVTGTPEEESTKKQRNLT---RSCVHEVAVPSGYALTKDEA 55
            +EE L AG  KR    E   +    E   T+ Q  +T   R  +   A+P+ Y  ++   
Sbjct: 60   VEEELGAGPSKRSRNSEGTALDKGQEPTITQHQEIITPDGRRVISFSALPADYTPSE--- 116

Query: 56   IHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMA 115
                F  P      AK Y+F LDPFQ+ ++  +E+ ESVLV+AHTSAGKT  AEYAIAM+
Sbjct: 117  ----FTPP---ARPAKEYAFALDPFQQAAIGFIEKGESVLVAAHTSAGKTVTAEYAIAMS 169

Query: 116  FRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYR 175
             + KQRVIYTSP+KALSNQKYR++ +EF DVGLMTGD+T++P+A+CL+MTTEILR MLYR
Sbjct: 170  LQKKQRVIYTSPIKALSNQKYRDMAEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYR 229

Query: 176  GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICH 235
            GSE+++EVAWVI+DEIHYM+D++RGVVWEESII LP  ++ VFLSAT+ N+ +FA WI  
Sbjct: 230  GSEIMREVAWVIYDEIHYMRDKDRGVVWEESIILLPHKVRFVFLSATIPNSQEFAGWIAT 289

Query: 236  LHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR 295
            +H QPCHVVYTD+RP PLQHY+FP GG GLYLVVDEK +FREDNF K       +     
Sbjct: 290  IHHQPCHVVYTDYRPVPLQHYIFPSGGEGLYLVVDEKSRFREDNFQKAMAVLQGEGGEEE 349

Query: 296  RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
                K +G   +       S++ KIV++IMER + PVI+FSFS+RECE +A+ MSKLDFN
Sbjct: 350  SGKKKKNGGKGQ------QSELGKIVRLIMERSYDPVIIFSFSKRECEAYALKMSKLDFN 403

Query: 356  TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
             + EK+ VEQVF NA+D L+EED+ LP +  +LPLLKRG+ +HH GLLP++KE++E+LFQ
Sbjct: 404  EEGEKELVEQVFTNAIDSLSEEDKTLPQVVSLLPLLKRGVGIHHGGLLPILKEIIEILFQ 463

Query: 416  EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
            EGL+K LFATETF++G+NMPAKTVVFT   K+DG   R++  GEYIQMSGRAGRRGKDDR
Sbjct: 464  EGLIKCLFATETFSIGINMPAKTVVFTQCTKFDGKDFRWVTPGEYIQMSGRAGRRGKDDR 523

Query: 476  GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
            GI I+M+D +ME +  K ++ G+P  L S++ +SY  +LN++ R +G    E ++++SFH
Sbjct: 524  GIVIMMMDSKMEPDVCKAILYGEPDKLYSSYHVSYNMLLNML-RVQG-VNPEFLVRSSFH 581

Query: 536  QFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            Q+Q E A P + K+   +E  A  +       GEA  AEY+  +    +++K++      
Sbjct: 582  QYQQEAAAPALEKEAESMEAVARGVKIEGGTEGEAAAAEYYACRSQWEEIKKEMRKYTQD 641

Query: 592  PERVLYYLGSGRLIKV----REGGTDWGWGVVVNV------------------------- 622
            PE VL +L  GRL  V     EG  DWGWG VV                           
Sbjct: 642  PEIVLSFLKKGRLAYVVEETPEGKRDWGWGAVVGYKVVDGGKVKSKTQEGGGAAIGRAGL 701

Query: 623  ---------------VKKPSAGVGTLP---SRGGG----YIVPVQLPLISTLSKIRLSVP 660
                           V+K S    T P   S G G     +V V LP + TLS + + +P
Sbjct: 702  VKGDGWAHVVEMCLRVRKGSGKETTPPEPFSVGEGEFDTRVVGVLLPCLETLSAVCIHMP 761

Query: 661  PDLRPLDARQSILLAVQELESRF----PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
             +++  ++R  +   ++E+E R       G+P L+P+KD+KI+      L+ + + LE K
Sbjct: 762  GEIKSSESRSQVGRGLKEVERRLGGENGPGIPFLDPIKDLKIQSDTFKTLLERAKVLEEK 821

Query: 717  LFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGH 775
            +    L + +    +   +  K E   + + L+ + R  Q    +D++K   RVL++LG 
Sbjct: 822  MERCRLREREGWRGVYAAYVEKTEAMDKAKLLRREARMHQALVMKDDVKRMKRVLRRLGF 881

Query: 776  IDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF-IPVDKSSEQI 834
            +D++ V+QLKGR AC ++T DEL+VTE++FNG FNDL   QV AL  C      K   + 
Sbjct: 882  VDSENVLQLKGRVACEVNTVDELVVTEMIFNGVFNDLKPEQVVALIGCMCFEEKKKEGEQ 941

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             +R ++     +L+ +A  + ++  ECKL ++ +EY ES   P +++V+Y W+ GA F+E
Sbjct: 942  KVREDMMAAFGKLKSTALAVGKVVQECKLALDPEEYAES-FNPDMIEVLYAWTLGAKFSE 1000

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            VI++TD FEG+IIR  RRLDE L QL +A+ A+G+  L++KF  AS+++RR I+F+ SLY
Sbjct: 1001 VIKLTDTFEGTIIRVIRRLDEVLRQLASASHAIGDHTLKEKFEEASKAIRRDIVFAASLY 1060

Query: 955  L 955
            L
Sbjct: 1061 L 1061


>gi|296083960|emb|CBI24348.3| unnamed protein product [Vitis vinifera]
          Length = 968

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/1015 (44%), Positives = 635/1015 (62%), Gaps = 119/1015 (11%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTR-----SCVHEVAVPSGYALTKDEAIHGTFANP 63
           KRK+ E+      +P+++  +   +L       +C+H+V+ P GY     E      ++P
Sbjct: 5   KRKSTEDPSVERLSPQKQQREDSASLNTLEESVACIHDVSYPEGY-----EPRSSFSSSP 59

Query: 64  VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVI 123
             + + AK + F LDPFQ  ++ CL+  ESV+VSAHTSAGKT VA YAIAM+ ++ QRVI
Sbjct: 60  RKDSKPAKEFPFTLDPFQSEAIKCLDAEESVMVSAHTSAGKTVVALYAIAMSLQNNQRVI 119

Query: 124 YTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEV 183
           YTSP+KALSNQKYRE  +EF DVGLMTGDVT+ PNASCLVMTTEI R M Y+GSE+++EV
Sbjct: 120 YTSPIKALSNQKYREFKEEFSDVGLMTGDVTIEPNASCLVMTTEIWRSMQYKGSEIIREV 179

Query: 184 AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHV 243
           AWVIFDE+HYM+DRERGVVWEESI+  P   + VFLSAT+ NA +FA+W+  +H+QPCH+
Sbjct: 180 AWVIFDEVHYMRDRERGVVWEESIVMAPRNSRFVFLSATVPNAKEFADWVAKVHQQPCHI 239

Query: 244 VYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG-RRENGKAS 302
           VYTD+RPTPLQHY+FP GG GLYLVVDEK +FRED+F K  +  +    G  +RENGK  
Sbjct: 240 VYTDYRPTPLQHYIFPSGGDGLYLVVDEKGKFREDSFQKALNALVPAGEGDKKRENGKRQ 299

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             +  G +G   SDIFK+VKMI++R++ PVI+FSFS+R+CE  AM M+++D N   EK  
Sbjct: 300 KGLVVGRAGE-ESDIFKMVKMIIQRQYDPVILFSFSKRDCEFLAMQMARMDLNDDNEKVN 358

Query: 363 VEQVFQNAVDCLNEEDRNLPAIEL---MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +E +F +A+D L+++D+ LP   +   MLPLLKRGI VHHSGLLP++KE++E+LFQEGL+
Sbjct: 359 IETIFWSAMDMLSDDDKKLPQARIVSNMLPLLKRGIGVHHSGLLPILKEVIEILFQEGLI 418

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K LFATETF++GLNMPAKTVVFT V+K+DGD  R+I SGE+IQMSGRAGRRG D+RGICI
Sbjct: 419 KCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWISSGEFIQMSGRAGRRGIDERGICI 478

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           +MVDE++E +T K M+ G    L S F LSY  +LN M   +G    E +++NSF+QFQ 
Sbjct: 479 LMVDEKLEPSTAKMMLKGSADCLNSAFHLSYNMLLNQMRSEDGD--PEKLLRNSFYQFQA 536

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           ++A+PD+ K+   LEEE  S+    E  +  Y+ L      L+K +   +  P   L +L
Sbjct: 537 DRAIPDLEKQAKNLEEERDSIIIEEEDSLENYYNLIQQYKSLKKDVRDIVFSPRYCLPFL 596

Query: 600 GSGRLIKVREGGTDWG-----------WGVVVN----------VVKKPSAG---VGTLP- 634
             GRL+ ++   T+             W V++N          V +KP      V  L  
Sbjct: 597 QPGRLVCIQCTKTEENSPSFCIKDQTTWAVIINFERVKGTEDDVSRKPEDADYMVDVLTR 656

Query: 635 ---SRGG--------------GYIVPVQLPL---------------ISTLSKIRLSVPPD 662
              SR G              G  V V +P+               I  LS +RL +  D
Sbjct: 657 CTVSRDGVLKKTIKIVSLKEPGEPVVVTVPISQANCNMIILGFLNSIDGLSSVRLIISKD 716

Query: 663 LRPLDARQSILLAVQELESRFP-QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
           L PL+AR++ L  V E+ SRF  +G+P L+P +DMK++  +    V +IE LE     H 
Sbjct: 717 LLPLEARENTLKKVSEVLSRFAKEGMPLLDPEEDMKVQSSQYRKAVRRIEALESLFDKHE 776

Query: 722 LNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
           + KS   E +++    K E+  +I+ +K  MR S    F+DELK R RVL+KLG++ +D 
Sbjct: 777 VAKSPLIEQKLKVLHMKKELTAKIKSIKRTMRSSTALAFKDELKARKRVLRKLGYVTSDN 836

Query: 781 VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
           VV+LKG+        DEL   EL+F                                   
Sbjct: 837 VVELKGKLQDAQKPKDEL---ELLFT---------------------------------- 859

Query: 841 AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
                QLQ++AR++A++Q E K++++V+ +V S  RP +M+ ++ W+KG+ F +++++T 
Sbjct: 860 -----QLQDTARRVAKVQLESKVQIDVESFVNS-FRPDIMEAVHAWAKGSKFYQIMEITQ 913

Query: 901 IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +FEGS+IR+ RRL+E L QL  AA+++GE  LE KF  A   ++R I+F+ SLYL
Sbjct: 914 VFEGSLIRAIRRLEEVLQQLIQAAKSIGETELEAKFEEAVSKIKRDIVFAASLYL 968


>gi|145347614|ref|XP_001418258.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578487|gb|ABO96551.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 933

 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/927 (47%), Positives = 613/927 (66%), Gaps = 49/927 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AK+Y+FELD FQ+ +V CLER ESVLVSAHTSAGKT VAEYAIAMA RD QRV+YTSPLK
Sbjct: 15  AKSYAFELDTFQQKAVECLERGESVLVSAHTSAGKTVVAEYAIAMAIRDGQRVVYTSPLK 74

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYREL +EF+DVGLMTGDV ++P+ASCLVMTTE+LR MLYRG EV++EV WVI+D
Sbjct: 75  ALSNQKYRELKEEFEDVGLMTGDVVINPSASCLVMTTEVLRSMLYRGGEVMREVGWVIYD 134

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHYM+D ERGVVWEESI+ LP  +K VFLSAT+ NA +FAEW+C  H QPCH+VYTDFR
Sbjct: 135 EIHYMRDSERGVVWEESIVLLPDMVKYVFLSATIPNAREFAEWVCKTHNQPCHIVYTDFR 194

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           PTPL+HYVFP  G G++LV+D + +FR+ NF +   T +    G          R   G 
Sbjct: 195 PTPLEHYVFPANGEGIFLVMDRQSKFRDSNFEQAV-TVIADGGGAAAARVANRARGDDGK 253

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
             +   DIFKI++M++ER + PVIVF+F++ ECE+ A S+ K+D   ++EK  ++ ++ N
Sbjct: 254 KEAVNQDIFKIIRMVVERNYDPVIVFAFNKHECEKMANSLHKVDLCDEDEKKLIDTIYWN 313

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           A+D L++ED+ LP +  +  LL+RG+ VHHSGLLP++KE++E+LFQEGL+K LFATET +
Sbjct: 314 AMDSLSDEDKRLPQVANLPNLLRRGLGVHHSGLLPILKEVIEILFQEGLIKVLFATETMS 373

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
           +GLNMPA+TVVF + +K+DG   R+I SGEYIQMSGRAGRRGKDDRG+ I+M+DE+M+  
Sbjct: 374 VGLNMPARTVVFCSPRKFDGAGFRWITSGEYIQMSGRAGRRGKDDRGLVILMMDERMDPP 433

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
             K+M+ G+   L S F L+Y  ILNLM R EG    E +I++SF QFQ ++ALP +  K
Sbjct: 434 VAKNMLHGQSDTLDSAFHLNYAMILNLM-RVEGA-EPESLIQSSFAQFQNDRALPGLEAK 491

Query: 550 VSKLEEEAASLDASGEAEVAEYHKLK--LDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
           + +++++  ++    E  V EY KLK  LD    E+++++    P   + +L  GRL  V
Sbjct: 492 IVEIQKDRDAVKIHDEDSVDEYVKLKDGLDAMIRERRVVT--NTPTHAVPFLQPGRL--V 547

Query: 608 REGGTDWGWGVVVN-------------------VVKKPSAGVGTLP----SRGGGY---- 640
           R G  D  WG++V+                   +V+      G  P    S+   Y    
Sbjct: 548 RPGEEDVVWGMIVSFERIGGGGKSGKAAYGVDVLVRTRENSDGKTPLSSKSKNDRYEFLN 607

Query: 641 -----------IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                      ++ V L  +  LS +R+ +P DL P +AR   + +V E+  RFP G+P 
Sbjct: 608 ANEEDDSSEPRVIRVPLEQLDVLSSVRVYLPKDLHPREARDQCISSVGEVIKRFPDGVPV 667

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
           L+  +D+KI+      L+ +I+ ++  +  HP+  S+    Q+   +RK E++  ++Q K
Sbjct: 668 LDATRDLKIDSENFSKLLKRIDGIKSMMKKHPVASSERLVEQLSAHKRKRELSIALKQAK 727

Query: 749 SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
              + +     R+ELK   RVLK+LGH  A+GVVQ KGR AC + + DEL+  EL+FNG 
Sbjct: 728 KNAKAAAGLIMRNELKQMRRVLKRLGHTSAEGVVQTKGRVACELASVDELVTAELIFNGM 787

Query: 809 FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
           F ++D   + AL SC +  +KS     L  E A+   +L++ ARK+ +   EC++ V+V+
Sbjct: 788 FKEVDVDMLVALVSCLVWREKSRNTPKLSEETAEVFSRLKDVARKVGKQMMECRMSVDVE 847

Query: 869 EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
           EYVE   R  LM+++  W KG  FAE+++MTD+FEGSI+R+ RR++E L QL  A + +G
Sbjct: 848 EYVEG-FRSELMEIMLAWCKGNKFAEIMKMTDLFEGSIVRAIRRVEEVLRQLSDACRVIG 906

Query: 929 EVNLEKKFAAASESLRRGIMFSNSLYL 955
           E  L++KF  ASE ++R I+F  SL+L
Sbjct: 907 ETELQEKFTIASEKVKRDIVFVASLFL 933


>gi|118376256|ref|XP_001021310.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
 gi|89303077|gb|EAS01065.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila SB210]
          Length = 1037

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/966 (44%), Positives = 633/966 (65%), Gaps = 63/966 (6%)

Query: 29   KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
            K  +    +C HEV  P GY              P      AK Y F+LD FQR +V C+
Sbjct: 96   KNDKGKIENCWHEVFYPEGYEF-----------KPKPKRPAAKEYPFKLDHFQRKAVNCI 144

Query: 89   ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
            E NESVLV+AHTSAGKTAVAEYAIA + RDKQ+VIYTSP+KALSNQKYREL +EFKDVGL
Sbjct: 145  ECNESVLVAAHTSAGKTAVAEYAIAQSLRDKQKVIYTSPIKALSNQKYRELQKEFKDVGL 204

Query: 149  MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
            +TGDV+++  ASCLVMTTEILR MLYRGSE+ +EVAWVIFDE+HYM+D+ERGVVWEE++I
Sbjct: 205  VTGDVSINQTASCLVMTTEILRSMLYRGSEITREVAWVIFDEVHYMRDKERGVVWEETMI 264

Query: 209  FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
             L   ++ VFLSAT+ NA +FAEWIC + KQPCHVVYTD+RP PLQH++FP GG G+YL+
Sbjct: 265  LLNQNVRYVFLSATIPNAAEFAEWICRIKKQPCHVVYTDYRPVPLQHFIFPTGGEGIYLI 324

Query: 269  VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
            VD K  FREDNF K   + +   I     + K      K    + G+++ KI+K+I  + 
Sbjct: 325  VDHKGTFREDNFQKAL-SVMGDNIDLTNTDKK------KRKKPTEGAELNKILKLISTKN 377

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             +P IVFSFS+R+ E +A +M+ +D  TQ+EK+ ++ VFQ+A+  L EED+ LP I  +L
Sbjct: 378  LEPAIVFSFSKRDVESYAKAMNNMDLTTQDEKEKIDSVFQSAISQLAEEDQKLPQITQIL 437

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            P+LKRGI +HH GLLP++KE++E+LFQ+G +K LF+TETF+MGLNMPA+TVVFT+V+K+D
Sbjct: 438  PILKRGIGMHHGGLLPIVKEIIEILFQQGWLKILFSTETFSMGLNMPARTVVFTSVRKFD 497

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G+  R+I  GEYIQMSGRAGRRGKDD+G  I+MVD++ME    K M+ G+  PL S+F L
Sbjct: 498  GEDFRWIQGGEYIQMSGRAGRRGKDDKGFTILMVDQKMEPEVAKGMLKGQADPLNSSFHL 557

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ++N M   +     E++I+ S HQFQ +K LP + +K ++L ++  SL    E+++
Sbjct: 558  CYNMLINSMRLEDND--PEYIIRRSLHQFQNDKQLPQMKEKYNELVQKKESLSIQNESQI 615

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN------- 621
            AE  K +  I   E+K    + + + VL YL  GRLI+V+    DWGWG+ +N       
Sbjct: 616  AEICKFREQIKIYEEKERRIVIQEKYVLPYLHIGRLIRVQYKNQDWGWGISINFHQKKVQ 675

Query: 622  ----------------VVK-----KPSAG-----VGTLPSRGGGYIVPVQLPLISTLSKI 655
                            +V      KP           +   G   ++P+ L  I+ +S I
Sbjct: 676  QKKKKKSNEDEPEDIIIVDIMCHIKPRQNNEEPKPALITEEGELEVIPMNLSTITEISSI 735

Query: 656  RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
            +L +P  L  L+ +  I   ++E+  +FP+ +PK++P+KDMKI + E++ ++++ E+L+ 
Sbjct: 736  KLDLPSRLDTLENKLLIKETLKEIRKQFPE-VPKIHPIKDMKILNDELIRVLDKKEKLKE 794

Query: 716  KLFAHPLNKSQDEN---QIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKK 772
             +    + KS+  N   QI  +++K +++  I +LK ++  SQ    +D+L    RV+++
Sbjct: 795  SM-EKEMQKSEIPNLQQQIEQYEQKQKLHISILRLKEEIEKSQKMVLQDDLACMKRVMRR 853

Query: 773  LGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSE 832
            LG I  D +VQL G+ AC +   DE+L T+L+ +  FN++  + +AAL SC +  D+++ 
Sbjct: 854  LGFISKDQIVQLPGKVACEVSACDEILATQLLLSNFFNEMSPNHIAALLSCLVH-DENNS 912

Query: 833  QINLRME---LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            Q N +++   LA   +++ E A+ I  +  E K+++   +Y+  T++P LM+V+Y W +G
Sbjct: 913  QENQQIQDQDLALYFEKVVEIAKGIYTVMQESKMQIEEKDYL-GTLKPQLMEVVYKWCQG 971

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            ++FA++ ++T+ +EGSIIR  RRLDE L Q+ +A + +G   L +KF  AS++L+RGI+F
Sbjct: 972  SSFADICKLTNCYEGSIIRCMRRLDELLKQMESACKVMGNEILGEKFKEASKNLKRGIIF 1031

Query: 950  SNSLYL 955
            + SLY+
Sbjct: 1032 AASLYV 1037


>gi|367054316|ref|XP_003657536.1| hypothetical protein THITE_2123361 [Thielavia terrestris NRRL 8126]
 gi|347004802|gb|AEO71200.1| hypothetical protein THITE_2123361 [Thielavia terrestris NRRL 8126]
          Length = 1090

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/982 (46%), Positives = 629/982 (64%), Gaps = 76/982 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P        E I  +   P    E A+ Y F LDPFQ +SVA +ER+ES
Sbjct: 125  LSHNIQHQVALPPDLDY---EYIPLSEHKP--PAEPARVYPFRLDPFQALSVASIERDES 179

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+   +F DVGLMTGDV
Sbjct: 180  VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYRDFQADFGDVGLMTGDV 239

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 240  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 299

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP G +G+YL+VDEK 
Sbjct: 300  VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGSNGIYLIVDEKG 359

Query: 274  QFREDNF----VKLQ--------DTFLKQKIGGRRENGKASGRMAKGGSGSG-GSDIFKI 320
             F+E+NF     K++        D   KQK  GR +N K +    KGG      SDI K+
Sbjct: 360  NFKENNFNEAMAKIESKKGSDPADWSAKQK--GRGKNKKTN----KGGEAPAEQSDIAKV 413

Query: 321  VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
            +KMI+ +KF PVIVF+FS+ ECEQ A++ S + FN  +E+  V QVF+NA++ L+E+D+N
Sbjct: 414  IKMIIRKKFHPVIVFNFSKHECEQMALNTSVMKFNAPDEEAMVVQVFENAINQLSEDDKN 473

Query: 381  LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
            LP I  +LPLL++GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVV
Sbjct: 474  LPQISNILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVV 533

Query: 441  FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA 500
            FT V KWDG   R + S EYIQM+GRAGRRG DDRGI I+MVD+++E +  + +V+G   
Sbjct: 534  FTQVTKWDGVQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMVDDKLEPDVARSVVVGHQD 593

Query: 501  PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL 560
             L S F L Y  ILNL+ R E   + E +++  F QFQ    +P + ++++ L++E  S+
Sbjct: 594  RLNSAFHLGYNMILNLL-RIEA-ISPEFMLERCFFQFQNAHGVPQLERELASLQQERDSM 651

Query: 561  DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK-VREGGTDWGWGVV 619
                E+ V EY  ++  +   +K ++S +  P   L ++  GR +  V   GTD+GWGVV
Sbjct: 652  MIPDESTVKEYRTIRQQLDGYQKDMISVMQHPTYCLKFMKPGRAVHIVAPDGTDFGWGVV 711

Query: 620  VNVV--KKPSAG------------------------------------VGTLPS----RG 637
            ++ V  K+P  G                                     G +P+    +G
Sbjct: 712  LDFVARKRPKFGQPDWPPQESYFIDVLLRVSSGSPEVSSLLKGDTAVPPGVVPAERGDKG 771

Query: 638  GGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
               +VP  L  +  LS+IRL +P +    + R+ +   + E + R P G+P L+P+++M 
Sbjct: 772  RWEVVPCLLSCMKALSQIRLHLPKNAASAEQREMVGKMLLEAQRRLPDGVPVLDPLENMG 831

Query: 698  IEDPEVVDLVNQIEELEHKLFAHPLNKSQ--DENQIRCFQRKAEVNHEIQQLKSKMRDSQ 755
            I D     L+ +IE LE +L A+PL+ S   DE   R    K  +  +I++ K  +  + 
Sbjct: 832  IRDESFKKLLRKIEVLESRLIANPLHNSPLLDELWPR-LDAKLALGEKIKEKKRAIAKAH 890

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLD 813
                 DELK+R RVL++LG I+   VVQ+K R AC I +  G ELL+ EL+FN  FN++ 
Sbjct: 891  SVAQLDELKSRKRVLRRLGFINEAEVVQMKARVACEISSTEGHELLLAELLFNRFFNEMA 950

Query: 814  HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
                AA+ S F+  D+  E   LR ELAKPL+++Q  AR IA++  E KLEVN DEYV+S
Sbjct: 951  PELCAAVLSVFV-FDEKVEATELREELAKPLREIQAQARVIAKVSAESKLEVNEDEYVQS 1009

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
             ++  LM+ +  W+ G  F+EV +M +++EGS+IR  RRL+E L Q+  A + +G   L+
Sbjct: 1010 -LKWQLMETVLAWANGRPFSEVCKMANVYEGSLIRVFRRLEELLRQMAEAGRVMGSEELK 1068

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
            +KF A+   +RR I+  NSLYL
Sbjct: 1069 EKFEASLSRIRRDIVSVNSLYL 1090


>gi|85079176|ref|XP_956298.1| ATP-dependent RNA helicase DOB1 [Neurospora crassa OR74A]
 gi|28881140|emb|CAD70310.1| probable ATP dependent RNA helicase [Neurospora crassa]
 gi|28917356|gb|EAA27062.1| ATP-dependent RNA helicase DOB1 [Neurospora crassa OR74A]
 gi|57019005|gb|AAW32908.1| FRQ-interacting RNA helicase [Neurospora crassa]
          Length = 1106

 Score =  834 bits (2155), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/977 (45%), Positives = 628/977 (64%), Gaps = 68/977 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P        E I  +   P    E A+TYSF+LDPFQ +SVA +ER ES
Sbjct: 143  LSHNIQHQVALPPDLDY---EYIPLSEHKP--PAEPARTYSFKLDPFQALSVASIEREES 197

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+   EF DVGLMTGDV
Sbjct: 198  VLVSAHTSAGKTVVAEYAIAQCLKKNQRVIYTSPIKALSNQKYRDFQAEFGDVGLMTGDV 257

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 258  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKIRGVVWEETIILLPDK 317

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP GG G+ L+VDEK 
Sbjct: 318  VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGGKGILLIVDEKG 377

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG--------SGSGGSDIFKIVKMIM 325
             F+E+NF +     +++K G    +  A  +             +    +DI KI+KMI+
Sbjct: 378  NFKENNFNQAM-AMIEEKKGTDSNDWSAKQKGKGKNKKTNKGGEAADEKADIAKIIKMIL 436

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++ FQPVIVF+FS+RECEQ A++ S + FN  +E++ V +VF+NA+  L+E+D+NLP I 
Sbjct: 437  KKNFQPVIVFNFSKRECEQMALASSSMKFNAPDEENMVNKVFENALASLSEDDKNLPQIS 496

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL++GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT V 
Sbjct: 497  NILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTQVT 556

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R + S EYIQM+GRAGRRG DDRGI I+MVD+++E  T + +V+G    L S 
Sbjct: 557  KWDGQQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMVDDKLEPETARAIVVGNQDKLNSA 616

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  +LNL+ R E   + E++++  F QFQ   ++P + +++  L++E  ++    E
Sbjct: 617  FHLGYNMVLNLL-RIEA-ISPEYMLERCFFQFQNAASVPQLERELISLQQERDAIIIPDE 674

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE-GGTDWGWGVVVNVVK 624
            + V +Y+ ++  + +  K ++  I  P+  L +   GRLI ++   G D+GWGV++  ++
Sbjct: 675  SIVKDYYGVRQQLEEYNKDMVFVIQHPQNCLGFFQEGRLIHIKSPSGVDYGWGVLIKHIQ 734

Query: 625  KPSAGVGTLP----------------------SRGGG------------------YIVPV 644
            + +   G  P                      +RG G                   +VP 
Sbjct: 735  RQTPKNGQPPYPEQESYVLDVLLKVSGDFNPKTRGEGPMPEGIMPAGKDSKNARWEVVPC 794

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             L  +  L ++R+ +P  L   D +  +  AV E+  RFP G+P L+P+++M I D    
Sbjct: 795  LLNCLRALGQLRVFLPKRLESADEKDGVGKAVDEISRRFPDGIPILDPMENMGINDDSFK 854

Query: 705  DLVNQIEELEHKLFAHPLNKS----QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
             L+ +IE LE +L A+PL+ S    +  NQ   +  K ++  +I++ K  +  +      
Sbjct: 855  KLLRKIEVLESRLVANPLHNSPLLVELWNQ---YSLKMQLGEQIKEKKKAIARAHSVAQL 911

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVA 818
            DELK+R RVL++LG I+   VVQ+K R AC I +  G ELL+ EL+FN  FN+L     A
Sbjct: 912  DELKSRKRVLRRLGFINDAEVVQMKARVACEISSTEGHELLLAELLFNRFFNELSPEICA 971

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
             + SCFI  D+  E   L+ ELAKP +++Q  AR IA++  E KL+VN DEYV+S ++  
Sbjct: 972  CILSCFI-FDEKIETQALKEELAKPFREIQAQARIIAKVSAESKLDVNEDEYVQS-LKWQ 1029

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            LM+ +  W++G  F+E+ +MT+++EGS+IR  RRL+E L Q+  AA+ +G   L+ KF  
Sbjct: 1030 LMETVLAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMAEAARVMGSEELKDKFEL 1089

Query: 939  ASESLRRGIMFSNSLYL 955
            +   +RR I+  NSLYL
Sbjct: 1090 SLSKIRRDIVSFNSLYL 1106


>gi|336468765|gb|EGO56928.1| hypothetical protein NEUTE1DRAFT_84510 [Neurospora tetrasperma FGSC
            2508]
 gi|350288944|gb|EGZ70169.1| putative ATP dependent RNA helicase [Neurospora tetrasperma FGSC
            2509]
          Length = 1066

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/977 (45%), Positives = 628/977 (64%), Gaps = 68/977 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P        E I  +   P    E A+TYSF+LDPFQ +SVA +ER ES
Sbjct: 103  LSHNIQHQVALPPDLDY---EYIPLSEHKP--PAEPARTYSFKLDPFQALSVASIEREES 157

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+   EF DVGLMTGDV
Sbjct: 158  VLVSAHTSAGKTVVAEYAIAQCLKKNQRVIYTSPIKALSNQKYRDFQAEFGDVGLMTGDV 217

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 218  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKIRGVVWEETIILLPDK 277

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP GG G+ L+VDEK 
Sbjct: 278  VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGGKGILLIVDEKG 337

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG--------SGSGGSDIFKIVKMIM 325
             F+E+NF +     +++K G    +  A  +             +    +DI KI+KMI+
Sbjct: 338  NFKENNFNQAM-AMIEEKKGTDSNDWSAKQKGKGKNKKTNKGGEAADEKADIAKIIKMIL 396

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++ FQPVIVF+FS+RECEQ A++ S + FN  +E++ V +VF+NA+  L+E+D+NLP I 
Sbjct: 397  KKNFQPVIVFNFSKRECEQMALASSSMKFNAPDEENMVNKVFENALASLSEDDKNLPQIS 456

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL++GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT V 
Sbjct: 457  NILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTQVT 516

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R + S EYIQM+GRAGRRG DDRGI I+MVD+++E  T + +V+G    L S 
Sbjct: 517  KWDGQQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMVDDKLEPETARAIVVGNQDKLNSA 576

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  +LNL+ R E   + E++++  F QFQ   ++P + +++  L++E  ++    E
Sbjct: 577  FHLGYNMVLNLL-RIEA-ISPEYMLERCFFQFQNAASVPQLERELISLQQERDAIIIPDE 634

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE-GGTDWGWGVVVNVVK 624
            + V +Y+ ++  + +  K ++  I  P+  L +   GRLI ++   G D+GWGV++  ++
Sbjct: 635  SIVKDYYGVRQQLEEYNKDMVFVIQHPQNCLGFFQEGRLIHIKSPSGVDYGWGVLIKHIQ 694

Query: 625  KPSAGVGTLP----------------------SRGGG------------------YIVPV 644
            + +   G  P                      +RG G                   +VP 
Sbjct: 695  RQTPKNGQPPYPEQESYVLDVLLKVSGDFNPKTRGEGPMPEGIMPAGKDSKNARWEVVPC 754

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
             L  +  L ++R+ +P  L   D +  +  AV E+  RFP G+P L+P+++M I D    
Sbjct: 755  LLNCLRALGQLRVFLPKRLESADEKDGVGKAVDEISRRFPDGIPILDPMENMGINDDSFK 814

Query: 705  DLVNQIEELEHKLFAHPLNKS----QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
             L+ +IE LE +L A+PL+ S    +  NQ   +  K ++  +I++ K  +  +      
Sbjct: 815  KLLRKIEVLESRLVANPLHNSPLLVELWNQ---YSLKMQLGEQIKEKKKAIARAHSVAQL 871

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVA 818
            DELK+R RVL++LG I+   VVQ+K R AC I +  G ELL+ EL+FN  FN+L     A
Sbjct: 872  DELKSRKRVLRRLGFINDAEVVQMKARVACEISSTEGHELLLAELLFNRFFNELSPEICA 931

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
             + SCFI  D+  E   L+ ELAKP +++Q  AR IA++  E KL+VN DEYV+S ++  
Sbjct: 932  CILSCFI-FDEKIETQALKEELAKPFREIQAQARIIAKVSAESKLDVNEDEYVQS-LKWQ 989

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            LM+ +  W++G  F+E+ +MT+++EGS+IR  RRL+E L Q+  AA+ +G   L+ KF  
Sbjct: 990  LMETVLAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMAEAARVMGSEELKDKFEL 1049

Query: 939  ASESLRRGIMFSNSLYL 955
            +   +RR I+  NSLYL
Sbjct: 1050 SLSKIRRDIVSFNSLYL 1066


>gi|242091672|ref|XP_002436326.1| hypothetical protein SORBIDRAFT_10g000500 [Sorghum bicolor]
 gi|241914549|gb|EER87693.1| hypothetical protein SORBIDRAFT_10g000500 [Sorghum bicolor]
          Length = 960

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/963 (44%), Positives = 609/963 (63%), Gaps = 92/963 (9%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +CVH+V+ P GY  +   +     A      E A+ + F+LDPFQ  ++ C++  ESV+V
Sbjct: 46  ACVHDVSYPEGYDASA--STSRAIAGGADASEPARKFPFQLDPFQSEAIRCVDNGESVMV 103

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT VA YAIAM+ R++QRVIYTSP+KALSNQKYRE  +EF DVGLMTGDVT+ 
Sbjct: 104 SAHTSAGKTVVALYAIAMSLRNQQRVIYTSPIKALSNQKYREFKEEFSDVGLMTGDVTIE 163

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           PNASCLVMTTEI R M Y+GSEV++EVAW+IFDE+HYM+DRERGVVWEESI+  P   + 
Sbjct: 164 PNASCLVMTTEIWRSMQYKGSEVMREVAWIIFDEVHYMRDRERGVVWEESIVMAPKNSRF 223

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA +FA+W+  +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVDEK +FR
Sbjct: 224 VFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVDEKGKFR 283

Query: 277 EDNFVKLQDTFLKQKIGG-RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
           ED+F K  +  +       ++ENGK   ++   G  S  SDIFK+VKMI++R++ PVI+F
Sbjct: 284 EDSFQKALNALVPASDSAKKKENGKWQ-KVIMAGKSSEESDIFKMVKMIIQRQYDPVILF 342

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP             
Sbjct: 343 SFSKRECEFLAMQMAKMDLNEDDEKANIETIFWSAMDMLSDDDKKLP------------- 389

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
                                         +TF++GLNMPAKTVVFT V+K+DGD  R++
Sbjct: 390 ----------------------------QAKTFSIGLNMPAKTVVFTNVRKFDGDRFRWL 421

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEYIQMSGRAGRRG D RGICI+MVDE+ME +T K M+ G    L S F LSY  +LN
Sbjct: 422 SSGEYIQMSGRAGRRGIDQRGICILMVDEKMEPSTAKMMLKGSADSLNSAFHLSYNMLLN 481

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            M   +G    E ++++SF+QFQ +++LPD+ K++ +LE E  S+    E  + +Y+ L 
Sbjct: 482 QMRSEDGD--PEKLLRHSFYQFQADRSLPDLEKQIKELESERNSMVIEEEESLKDYYDLL 539

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD----------WGWGVVVNVVKK 625
                L+K +   +  P+ VL +L  GRL+++ E  TD            WG+++N  K 
Sbjct: 540 QQHRSLKKDVHDIVLSPKHVLPFLQPGRLVRI-EYSTDEPANFSIDENVTWGIIINFEKV 598

Query: 626 PSAG-----------------------------VGTLPSRGGGYIVPVQLPL--ISTLSK 654
            S G                             +  +P +  G  V V LPL  I  LS 
Sbjct: 599 KSHGEDRRPEDSDYTVDVLTRCSVTKDNNGKKTMKVVPLKARGEPVVVSLPLSQIDGLSS 658

Query: 655 IRLSVPPDLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEEL 713
           IR+ +P DL P++AR++ L  V+E+ SRF + G+P L+P +DMK++         +IE L
Sbjct: 659 IRMYIPKDLLPVEARENTLRKVEEVLSRFAKDGVPLLDPEEDMKVQSKSFRKATRRIEAL 718

Query: 714 EHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKK 772
           E     H + N    + +++ F  K E++ +I+ +K  MR S    F+DELK R RVL++
Sbjct: 719 ESLFEKHDIRNSPHIQQKLKVFHAKQELSAKIKSIKKTMRSSTALAFKDELKARKRVLRR 778

Query: 773 LGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSE 832
           LG++ +D VV++KG+ AC I + DEL +TELMF+G   D    Q+ AL SCF+  +K  +
Sbjct: 779 LGYVTSDDVVEVKGKVACEISSADELTLTELMFSGALKDATVEQMVALLSCFVWQEKLQD 838

Query: 833 QINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATF 892
               R EL     QLQE+AR++A +Q ECK++++V+ +V S  RP +M+ +Y W++G+ F
Sbjct: 839 APKPREELDLLFYQLQETARRVANLQLECKIQIDVESFVNS-FRPDIMEAVYSWARGSKF 897

Query: 893 AEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNS 952
            ++++MT +FEGS+IR+ RRL+E L QL  A++++GE  LE K   A   ++R I+F+ S
Sbjct: 898 YQIMEMTQVFEGSLIRAIRRLEEVLQQLILASKSIGETELEAKLEEAVNKIKRDIVFAAS 957

Query: 953 LYL 955
           LYL
Sbjct: 958 LYL 960


>gi|67472639|ref|XP_652111.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
 gi|56468924|gb|EAL46725.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 977

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/970 (45%), Positives = 619/970 (63%), Gaps = 49/970 (5%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGE 68
           KR+   ED +    P  EST       + C HEVAVP G   T+         NP Y  E
Sbjct: 34  KRRKIIEDKYKDLLPRPESTPILEAQYQGCTHEVAVPDGQVATEQTL------NPQYPTE 87

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            AKTY F LD FQR+SV+C+ +NESVLVSAHTSAGKTAVAEYAIA A ++ QRVIYTSP+
Sbjct: 88  PAKTYPFTLDDFQRLSVSCIGQNESVLVSAHTSAGKTAVAEYAIASALKNNQRVIYTSPI 147

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR+L ++F DVGL+TGD+T++  ASCLVMTTEILR MLYRG++V++EVAWVIF
Sbjct: 148 KALSNQKYRDLQEQFTDVGLITGDITINEEASCLVMTTEILRNMLYRGNDVMREVAWVIF 207

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HYM+D+ERGVVWEESII LP  +  VFLSAT+ NA +FA WI ++HKQ CHVVYTD+
Sbjct: 208 DEVHYMRDKERGVVWEESIILLPDTVHYVFLSATIPNAFEFASWIANIHKQACHVVYTDY 267

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RPTPL HY+FP GG+G+YLVVD++ +FRE+ F K   +     +G +  + + + +    
Sbjct: 268 RPTPLCHYLFPAGGNGIYLVVDKECKFREEGFNKALTSLGLDAVGIKTTSKQMNNK---- 323

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
                  D+ KI+ M+M+    PVIVFSF+R+E E  A + +++D  + +EK  + ++F 
Sbjct: 324 ------PDVIKIITMVMKNNLAPVIVFSFNRKELEVMAKTCNRMDLTSDDEKTIIAKIFN 377

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
           NA+ CLN EDR L  I  +LPLL +G+ +HHSGLLP++KE VE+LFQEGL+K LFATETF
Sbjct: 378 NAIQCLNAEDRKLEQITELLPLLLKGVGMHHSGLLPIMKETVEILFQEGLIKCLFATETF 437

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
           AMGLNMPA+TVVFT VKK+DG   RY+  GEYIQMSGRAGRRGKDD+G  I+MVD+++E 
Sbjct: 438 AMGLNMPARTVVFTNVKKYDGKETRYLRPGEYIQMSGRAGRRGKDDQGTVILMVDQKIEP 497

Query: 489 NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             LK+M+ GK  PL S+F L Y  +LNLM         E +I  SF QFQ    LP++ K
Sbjct: 498 TVLKNMIFGKADPLTSSFYLGYNMLLNLMKLEAAD--PEGLISKSFRQFQTNNKLPELQK 555

Query: 549 KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
           K+ +LEE+  +   + E  V   + LKL I Q  + +   I +   +L +L  GRL+ + 
Sbjct: 556 KLKELEEKEKTYIFTQEDIVKPLYHLKLAIDQHNENIHEAIYKESVLLPFLVDGRLVHIV 615

Query: 609 EGGT--DWGW-----------GVVVNVVKKPSAGV----GTLPSRGGGYIVPVQLPLIST 651
           +  T  D+GW           G V  +V      +    G L   G   I    +  IS 
Sbjct: 616 DKNTLFDFGWVPVLADRKRKVGTVSVIVSLKKGALQPTPGELGKGGNAGITSFNIDCISE 675

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQE-LESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQ 709
           +S +RL +P ++R  D   + L  +   ++ ++P   LP L+P+ DMKI D  V++ + +
Sbjct: 676 VSTLRLGLPDNVR--DNLDTFLFKINNAIKKKYPDFNLPVLDPINDMKINDQNVIESIKK 733

Query: 710 IEELEHKLFAHPLNKSQDENQIR----CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
           I+EL+ +      N+ Q ++  R     F  +  +  EI  L+S +  S+    +DEL+ 
Sbjct: 734 IKELKER-----WNQVQWDDITRKEFDMFVERENIREEISVLRSTVVQSKDVILKDELRG 788

Query: 766 RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
             RVLK+LG++  D ++Q KGR A  +  G+ELL+TEL+F+G F+ L+  Q  AL  CF+
Sbjct: 789 MRRVLKRLGYVSEDDIIQTKGRVAAELSAGNELLLTELLFSGVFSTLNAKQATALLGCFV 848

Query: 826 PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +K  EQ+    +L +    +  +A +IA I  +C+L +NV++Y+E   RP ++ ++  
Sbjct: 849 LDEKPKEQVQPPKDLEESFALIITNATRIANIMADCRLNINVNKYIEQ-FRPTMLPIVES 907

Query: 886 WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
           W  G TFA++IQ +D+FEGSIIR  RRL+E L Q+  A++ +G  +L KKF      ++R
Sbjct: 908 WCDGMTFAQLIQGSDLFEGSIIRGMRRLEELLVQMTDASKFMGNPDLAKKFEEGVTLIKR 967

Query: 946 GIMFSNSLYL 955
            I+F+ SLY+
Sbjct: 968 DIIFAASLYI 977


>gi|310799945|gb|EFQ34838.1| DSHCT domain-containing protein [Glomerella graminicola M1.001]
          Length = 1109

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 453/988 (45%), Positives = 629/988 (63%), Gaps = 76/988 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P        E +  +   P    E A+ Y+F+LDPFQ +SVA +ER ES
Sbjct: 132  LSHNIQHQVALPPDL---DHEYVPLSEHKP--PAEPARKYNFKLDPFQSLSVASIEREES 186

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+    F DVGLMTGDV
Sbjct: 187  VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYRDFEALFGDVGLMTGDV 246

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 247  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 306

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTDFRPTPLQ+Y FP GG+G++LVVDEK 
Sbjct: 307  VRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFFPAGGNGIFLVVDEKG 366

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKAS--GRMAKGGSGSGG------SDIFKIVKMIM 325
             FRE NF K     ++Q  G    N  AS  G+ AK  +  GG      +DI KIV+MIM
Sbjct: 367  VFREGNFQKTM-ALIEQGKGQDPNNASASWKGKGAKKQTQKGGAAADMKADISKIVRMIM 425

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
            ++ F PVI+F+FS++E E  A+ +S   FN   E+  V+ VF NA+  L+E DR+LP I+
Sbjct: 426  QKSFHPVIIFNFSKKEVENLALQISHFQFNNDSEQAMVKTVFNNAIQSLSEADRDLPQIQ 485

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +LPLL++GI VHHSGLLP++KE +E+LFQE L+K L ATETF++GLNMPAKTVVFT V 
Sbjct: 486  NLLPLLQKGIGVHHSGLLPILKETIEILFQESLIKVLVATETFSIGLNMPAKTVVFTQVT 545

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
            KWDG   R +   EYIQMSGRAGRRG D RGI I+M+D++ME +T + +V+G+   L S 
Sbjct: 546  KWDGTQRRPLTPSEYIQMSGRAGRRGLDSRGIVIMMIDDKMEPDTARAIVVGEQDRLNSA 605

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            F L Y  ILNL+ R E   + E +++  FHQFQ   ++P + + +  L++E  S+  + E
Sbjct: 606  FYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQTGASVPTLERDLMALQQERDSMSIADE 663

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE--------GGTDWGWG 617
            A V +Y+ L+  + Q    + + I  PE  + ++  GRL+++ +        GGTD+GWG
Sbjct: 664  ATVKDYYNLRNQLEQYTSDMRAVIQHPEHCIDFMQPGRLVRIHDPKKTNNTIGGTDFGWG 723

Query: 618  VVVNVVK----KP----------------------SAGV--------GTLPS-------- 635
            VV N+V+    KP                      SA +        G LPS        
Sbjct: 724  VVTNLVRRQQGKPTEPEYPPQESCVIDVMMVVDRNSAPIAEGAKLISGDLPSGLVPYPKP 783

Query: 636  --RGGGY---IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
               G G    IVP  L  +  +S+IR+ +P D +   A + +  +++E+  RFP GLP L
Sbjct: 784  EQPGNGARFEIVPCLLTCVKAISQIRVFMPKDCKSQAALEEVGNSLREVHRRFPDGLPIL 843

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKS 749
            +PV++M I D     L+ +IE LE +L  +PL+ S    Q+   ++ K ++  +I+  K 
Sbjct: 844  DPVENMGINDDSFKALMRKIEMLEARLLTNPLHGSPMLPQLYLQYRAKEKLGEQIKAKKK 903

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNG 807
            ++         DELK R RVL++LG ++   VV+LK R AC I +  G EL++ EL+F+ 
Sbjct: 904  EIARLHSIAQMDELKARKRVLRRLGFLNESEVVELKARVACEISSTEGHELVLAELLFDR 963

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
             FN+L    +AA  SCF+ +D+  E   LR ELAKP +++Q  A+++A++  E KLE+N 
Sbjct: 964  FFNELSPELIAATLSCFV-LDEKLETAALREELAKPFREVQAKAKQVAKVSRESKLELNE 1022

Query: 868  DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
            +EY+ +  +  LM+ +Y W++G  FAE+ +MT+ +EGS+IR  RRL+E L Q+   A+ +
Sbjct: 1023 EEYL-AGFKWQLMETVYSWAQGKPFAEICKMTNAYEGSLIRLFRRLEELLRQMGQGAKVM 1081

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G   L +KF  +   +RR I+ + SLYL
Sbjct: 1082 GSDELTQKFEDSLAKIRRDIVAAQSLYL 1109


>gi|336263716|ref|XP_003346637.1| hypothetical protein SMAC_04070 [Sordaria macrospora k-hell]
 gi|380091343|emb|CCC10839.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1079

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/927 (46%), Positives = 612/927 (66%), Gaps = 47/927 (5%)

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
             E A+TYSF+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTS
Sbjct: 162  AEPARTYSFKLDPFQALSVASIEREESVLVSAHTSAGKTVVAEYAIAQCLKKNQRVIYTS 221

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYR+   EF DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV
Sbjct: 222  PIKALSNQKYRDFQAEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWV 281

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            +FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYT
Sbjct: 282  VFDEIHYMRDKIRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHRQACHVVYT 341

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
            DFRPTPLQ+Y FP GG G+ L+VDEK  F+E+NF +     +++K G    +  A  +  
Sbjct: 342  DFRPTPLQNYFFPAGGKGILLIVDEKGNFKENNFNQAM-AMIEEKKGTDSNDWSAKQKGK 400

Query: 307  KGG--------SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
                       + +  +DI KI+KMI+++ FQPVIVF+FS+RECEQ A++ S + FN  +
Sbjct: 401  GKNKKTNKGGEAANEKADIAKIIKMILKKNFQPVIVFNFSKRECEQMALASSTMKFNAPD 460

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            E++ V +VF+NA+  L+E+D+NLP I  +LPLL++GI VHHSGLLP++KE +E+LFQEGL
Sbjct: 461  EENMVNKVFENALAQLSEDDKNLPQIANILPLLRKGIGVHHSGLLPILKETIEILFQEGL 520

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            +K LFATETF++GLNMPA+TVVFT V KWDG   R + S EYIQM+GRAGRRG DDRGI 
Sbjct: 521  IKVLFATETFSIGLNMPARTVVFTQVTKWDGQQRRPLTSSEYIQMAGRAGRRGLDDRGIV 580

Query: 479  IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            I+MVD+++E  T + +V+G    L S F L Y  +LNL+ R E   + E++++  F QFQ
Sbjct: 581  IMMVDDKLEPETARAIVVGNQDKLNSAFHLGYNMVLNLL-RIEA-ISPEYMLERCFFQFQ 638

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
               ++P + +++  L++E  S+    E+ V +Y+ ++  +    K ++  I  P+  + +
Sbjct: 639  NAASVPQLERELISLQQERDSIIIPDESIVKDYYNVRQQLEDYNKDMVHVIQHPQNCVGF 698

Query: 599  LGSGRLIKVRE-GGTDWGWGVVVNVV------------------KKPSAGVGTLP----S 635
               GRLI ++   G D+GWGV++                     +KP    G +P    S
Sbjct: 699  FQEGRLIHIKSPSGVDFGWGVLIKHTPASNRRTVSGDFNPKARGEKPMPE-GIMPAGKDS 757

Query: 636  RGGGY-IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
            +   + +VP  L  +  L ++R+ +P  L   D +  +  A  E+  RFP G+P L+P++
Sbjct: 758  KNARWEVVPCLLNCLKALGQLRVFLPKRLESADEKDGVGKATDEISRRFPDGIPMLDPME 817

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKS----QDENQIRCFQRKAEVNHEIQQLKSK 750
            +M I D     L+ +IE LE +L A+PL+ S    +  NQ   +  K ++  +I+  K  
Sbjct: 818  NMGINDDSFKKLLRKIEVLESRLVANPLHNSPLLIELWNQ---YSLKTQLAEQIKDKKKA 874

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGT 808
            +  +      DELK+R RVL++LG I+   VV++K R AC I +  G ELL+ EL+FN  
Sbjct: 875  IAQAHSVAQLDELKSRKRVLRRLGFINDAEVVEMKARVACEISSTEGHELLLAELLFNRF 934

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            FN+L     A + SCFI  D+  E   L+ ELAKP +++Q  AR IA++  E KL+VN D
Sbjct: 935  FNELSPEICACILSCFI-FDEKIETQALKEELAKPYREIQAQARIIAKVSAESKLDVNED 993

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            EYV+S ++  LM+ +  W++G  F+E+ +MT+++EGS+IR  RRL+E L Q+  AA+ +G
Sbjct: 994  EYVQS-LKWQLMETVLAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMAEAARVMG 1052

Query: 929  EVNLEKKFAAASESLRRGIMFSNSLYL 955
               L+ KF  +   +RR I+  NSLYL
Sbjct: 1053 SEELKDKFELSLSKIRRDIVSFNSLYL 1079


>gi|367034876|ref|XP_003666720.1| hypothetical protein MYCTH_2311660 [Myceliophthora thermophila ATCC
            42464]
 gi|347013993|gb|AEO61475.1| hypothetical protein MYCTH_2311660 [Myceliophthora thermophila ATCC
            42464]
          Length = 1081

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/981 (45%), Positives = 620/981 (63%), Gaps = 68/981 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P        E I  +   P    E A+TY F+LDPFQ +SVA +ER ES
Sbjct: 110  LSHNIQHQVALPPDLDY---EYIPLSEHKP--PAEPARTYPFKLDPFQALSVASIEREES 164

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+   EF DVGLMTGDV
Sbjct: 165  VLVSAHTSAGKTVVAEYAIAQCLKKNQRVIYTSPIKALSNQKYRDFQAEFGDVGLMTGDV 224

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 225  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 284

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP G  G+YL+VDEK 
Sbjct: 285  VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGTKGIYLIVDEKG 344

Query: 274  QFREDNFVKLQDTFLKQKIGGRRE-NGKASGRMAKGGSGSGG------SDIFKIVKMIME 326
             F+E NF +       +K     + + K  GR     +  GG      SDI +++KMI++
Sbjct: 345  NFKEHNFNEAMAAIESKKGSDPADWSAKQKGRGKNKKTNKGGEAPDEKSDIERVIKMIIK 404

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            R FQPVIVF+F++RECEQ A+  S + FN  +E+  VE+VF+NA+  L++EDR+LP I  
Sbjct: 405  RSFQPVIVFNFAKRECEQLALKTSNMKFNAPDEEQMVEKVFENALQQLSDEDRSLPQISN 464

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +LPLL++GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT V K
Sbjct: 465  ILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTQVTK 524

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTF 506
            WDG   R + S EYIQM+GRAGRRG DDRGI I+MVD+++E +  + +V+G+   L S F
Sbjct: 525  WDGVQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMVDDKLEPDVARSVVVGQQDRLNSAF 584

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
             L Y  ILNL+ R E   + E +++  F QFQ   ++P + ++++ L++E  S+    EA
Sbjct: 585  HLGYNMILNLL-RIEA-ISPEFMLERCFFQFQTASSVPQLERELANLQQERDSMIIPDEA 642

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE-GGTDWGWGVVVN--VV 623
             + +Y  ++  +   +K +++ +  P   L Y+ SGR +++    GT +GWGVV++    
Sbjct: 643  AIKDYRSIRQQLEGYQKDMIAVMQHPTYCLKYMKSGRPVEIETPKGTYYGWGVVLDFKAR 702

Query: 624  KKPSAGVGTLP----------------------------------------------SRG 637
            K P  G    P                                               RG
Sbjct: 703  KAPKMGEPDYPPQEAYFIDVLLKISSDDSAESPDLNGDTALRGDAAVPEGIYPAKAGERG 762

Query: 638  GGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
               +VP  L  +  L  +RL V   L   D R    + ++E + RFP GLP ++P+++M 
Sbjct: 763  RWEVVPCLLSCVKALGSLRLHVGKQLSSRDERDRAGMMLEEAKRRFPDGLPVVDPLENMG 822

Query: 698  IEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQI 756
            I D     L+ +IE LE +L A PL+ S   +++ +  + K  +  +I++ K  +  +  
Sbjct: 823  ITDESFKKLLRKIEVLESRLIASPLHNSPLLDELWQKLETKLALGEKIKEKKRAIMKAHS 882

Query: 757  QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDH 814
                DELK+R RVL++LG I+   VVQ+K R AC I +  G ELL+ EL+FN  FN+L  
Sbjct: 883  IAQMDELKSRKRVLRRLGFINEAEVVQMKARVACEISSTEGHELLLAELLFNRFFNELSP 942

Query: 815  HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
               A++ S FI  D+  E   L+ ELAKP +++Q  AR IA++  E KLEVN DEYV+S 
Sbjct: 943  ELCASVLSVFI-FDEKVETAALKEELAKPFREIQAQARIIAKVSAESKLEVNEDEYVQS- 1000

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            ++  LM+ +  W+ G  FAE+ +MT+ +EGS+IR  RRL+E L Q+  AA+ +G   L++
Sbjct: 1001 LKWQLMETVLAWANGKPFAEICKMTNAYEGSLIRLFRRLEELLRQMAEAAKVMGSEELKE 1060

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            KF  +   +RR I+  NSLYL
Sbjct: 1061 KFELSLSKIRRDIVSFNSLYL 1081


>gi|358254152|dbj|GAA54179.1| ATP-dependent RNA helicase DOB1 [Clonorchis sinensis]
          Length = 1428

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/981 (43%), Positives = 626/981 (63%), Gaps = 79/981 (8%)

Query: 11   KAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGY---ALTKDEAIHGTFANPVYNG 67
            KAP   +H    P+            +C HEVAVP       +TKD       + P    
Sbjct: 287  KAPRIKIHKIAAPD------------ACTHEVAVPPDMEYPPITKD-------SRPP--- 324

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
              AKTY F LDPFQ+ ++ C++ N+SV++SAHTSAGKT VAEYAIA A RDKQRVIYT+P
Sbjct: 325  --AKTYPFTLDPFQQQAITCIDNNQSVMISAHTSAGKTVVAEYAIATALRDKQRVIYTTP 382

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYRE +++F +VGLMTGD T++P+AS L+MTTEIL+ MLYRG+ +++EV WV+
Sbjct: 383  IKALSNQKYREFYEQFPEVGLMTGDATINPSASVLIMTTEILQSMLYRGASMMREVGWVV 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D +RGVVWEE+++ LP +++ VFLSAT+ NA QFAEWI HLH QPCHVV +D
Sbjct: 443  FDEIHYMRDPDRGVVWEETLVLLPDSVRYVFLSATIPNARQFAEWIAHLHHQPCHVVASD 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
             RP PL+HY++PVG  GLYLV+DE  ++ EDNF +   +F+      R++          
Sbjct: 503  CRPVPLRHYLYPVGSEGLYLVLDEG-KYLEDNFERAMRSFMSSTDPERKK---------P 552

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
             G+    +++ +IV+++  R  +P+IVFSFS++ECE +A+ ++K DF +  EK  V++VF
Sbjct: 553  VGNKRSENNVIQIVRLLKHRSLEPIIVFSFSKKECEIYALQLAKFDFTSDAEKKIVDEVF 612

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            +NA+D L+ EDR+LP +E +LPLL+RG+ +HH GLLP++KE VE+LF E L+K LFATET
Sbjct: 613  RNAIDSLSAEDRSLPQVESVLPLLRRGVGIHHGGLLPLLKETVEILFGENLIKCLFATET 672

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
            FAMGLNMPA+TV+FT+ +K+DG S+R+I  GEYIQMSGRAGRRGKDD G  I+MVDE M 
Sbjct: 673  FAMGLNMPARTVLFTSARKYDGQSYRWITPGEYIQMSGRAGRRGKDDSGTVILMVDETMT 732

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
                + +++G P PL S FRL+  ++L  + R E +   E++++ SF QFQ   +LP + 
Sbjct: 733  DEAARQIMMGPPPPLNSAFRLT-NNMLLNLLRVE-EINPEYMMERSFCQFQNYASLPVMY 790

Query: 548  KKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
            +++S+L +   S     E  V  Y +++L +  L  +    I RP+ ++ +L  GRLIKV
Sbjct: 791  RELSELRDSYCSTSIEDEDSVESYQQIRLCLNDLIGQQWHYIRRPQYIVPFLQPGRLIKV 850

Query: 608  REGGTDWGWGVVVNVVKK--------------------------------------PSAG 629
                  +GWG V+N+ K+                                       SA 
Sbjct: 851  TTDTCSYGWGAVINLKKRHRQDRSSTPESFYMIDCLLSTQPQKLRPAEGGSEPDTATSAD 910

Query: 630  VGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
              T   +    ++PV+L  +  +S +RL VP +L P ++RQ +L A++++ +R    LP 
Sbjct: 911  PATSSEQASAEVIPVRLDCVVGISAVRLMVPNNLLPKESRQGVLNAIEKVITRMGGVLPP 970

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ-IRCFQRKAEVNHEIQQLK 748
            L+PV+DM+I DP+ +++  +++  E +L  H L+      + +R F++K +    I+QL 
Sbjct: 971  LDPVEDMRISDPKFLEINEKVKAFEERLTHHWLHDDPRLPELLRAFEKKEQQRQRIEQLT 1030

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
              +         +EL  R RVL++L  +    V++LKG  AC I + DELL+TEL+F+G 
Sbjct: 1031 KNLSGKVSLVQLEELSARKRVLRRLNFVSEHDVIELKGCVACEITSADELLLTELLFDGV 1090

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            FN L    +AAL SCF+  +++SE   L  EL+  L+ LQ++AR+IA I NEC+L+V+ D
Sbjct: 1091 FNRLSAEHIAALLSCFVFEERASEMPKLTKELSDALRTLQDTARRIARISNECRLKVDED 1150

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
             YV+S  +P LMD++  W++GA+FA+V  MTD+FEG+IIR+ R L+E L Q+  AA+ +G
Sbjct: 1151 AYVDS-FKPHLMDLVDAWTRGASFAKVCSMTDLFEGTIIRTLRLLEELLRQMANAARTIG 1209

Query: 929  EVNLEKKFAAASESLRRGIMF 949
               LE+KF         G + 
Sbjct: 1210 STTLEEKFTEGETIYTSGFLL 1230


>gi|342886340|gb|EGU86207.1| hypothetical protein FOXB_03286 [Fusarium oxysporum Fo5176]
          Length = 1094

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/953 (46%), Positives = 614/953 (64%), Gaps = 76/953 (7%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T++F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYA+A   +  QRVIYTSP+K
Sbjct: 151  ARTWNFKLDPFQSLSVASIEREESVLVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSPIK 210

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+FD
Sbjct: 211  ALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFD 270

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            EIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTDFR
Sbjct: 271  EIHYMRDKIRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFR 330

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----GRRENGKASGR 304
            PTPLQ+Y FP GG+G  L+VDEK  F E NF K+     ++K         R+ GK   +
Sbjct: 331  PTPLQNYFFPSGGTGARLIVDEKSNFNEQNFNKVMQEVEEKKGADPNDPNARQKGKGKNK 390

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                G    GSDI KI++M +++KF PVIVF+FS+RECE  AM++S L FN   EK  V 
Sbjct: 391  KTNKGGADSGSDISKIIRMTIKKKFNPVIVFNFSKRECENLAMNISSLSFNDDSEKAMVR 450

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            +VF +A++ L+E DR LP I  +LPLL+RGI VHHSGLLP++KE +E+LFQE L+K LFA
Sbjct: 451  KVFNSAIESLSEGDRELPQIINLLPLLERGIGVHHSGLLPILKETIEILFQESLIKVLFA 510

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETF++GLNMPAKTVVFT V KWDG   R + S EYIQM+GRAGRRG D RGI I+M+D+
Sbjct: 511  TETFSIGLNMPAKTVVFTQVTKWDGVKRRPLTSSEYIQMAGRAGRRGLDARGIVIMMIDD 570

Query: 485  QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            ++E +T K++V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ   ++P
Sbjct: 571  KLEPDTAKEIVTGHQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAASVP 628

Query: 545  DIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRL 604
             + K++  L++E  +   + E+ V +Y++++  ++   K + + I  P   + YL  GRL
Sbjct: 629  SLEKELMSLQQERDNTSIADESTVKDYYQIRQQLSAYTKDMRTVIQHPNYSISYLQPGRL 688

Query: 605  IKVRE----------GGTDWGWGVVVNVVKKPSAGVGT--------------LP-SRGGG 639
            +++             GTD+GWGV+VN   + +  +G               LP SR   
Sbjct: 689  VQIYNPKDENETIAGTGTDFGWGVIVNQTPRRAPKMGEPEYAPQESYVIDVLLPISRSSA 748

Query: 640  ----------------------------YIVPVQLPLISTLSKIRLSVPPD-LRPLDARQ 670
                                         IVP  L  I  +S+IRL +P + L+    ++
Sbjct: 749  DFYPTQPVEDTPMPVGLKPFGDDDDIKFAIVPCLLTCIKAISQIRLFLPKEGLKSESEKE 808

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ---- 726
            ++  ++ E++ RFP GLP L+P+++M+I D     L+ +IE LE +L A+PL+ S     
Sbjct: 809  TLTKSLMEVKRRFPDGLPVLDPIENMEITDDSFKKLLRKIEVLESRLLANPLHLSPLLPA 868

Query: 727  --DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
              D+     +  K ++  ++++ K  +  +      DELK+R RVL++LG I+   VVQL
Sbjct: 869  LWDQ-----YHTKVKLTEKVKETKKAIAKAYSIAQMDELKSRKRVLRRLGFINDSEVVQL 923

Query: 785  KGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            K R AC I +  G ELL++EL+F+  FN+L     AA+ SCFI  D+  E   L+ EL+K
Sbjct: 924  KARVACEISSTEGHELLLSELLFDRFFNELTPEMCAAVMSCFI-FDEKIETTQLKEELSK 982

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            P +++Q  AR IA++  ECKLEVN +EYV+  ++  LM+ +Y W++G  F E+ +MT ++
Sbjct: 983  PYREIQAKARIIAKVSQECKLEVNEEEYVQK-LKWQLMETVYAWAQGRPFIEICKMTKVY 1041

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGS+IR  RRL+E L Q+  AA+ +G  +L KKF  +   +RR I+ + SLYL
Sbjct: 1042 EGSLIRLFRRLEELLRQMGQAAKVMGNDDLTKKFEDSLSKIRRDIVAAQSLYL 1094


>gi|449708424|gb|EMD47888.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
          Length = 977

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/970 (45%), Positives = 618/970 (63%), Gaps = 49/970 (5%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGE 68
           KR+   ED +    P  EST       + C  EVAVP G   T+         NP Y  E
Sbjct: 34  KRRKIIEDKYKDLLPRPESTPILEAQYQGCTLEVAVPDGQVATEQTL------NPQYPTE 87

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            AKTY F LD FQR+SV+C+ +NESVLVSAHTSAGKTAVAEYAIA A ++ QRVIYTSP+
Sbjct: 88  PAKTYPFTLDDFQRLSVSCIGQNESVLVSAHTSAGKTAVAEYAIASALKNNQRVIYTSPI 147

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR+L ++F DVGL+TGD+T++  ASCLVMTTEILR MLYRG++V++EVAWVIF
Sbjct: 148 KALSNQKYRDLQEQFTDVGLITGDITINEEASCLVMTTEILRNMLYRGNDVMREVAWVIF 207

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HYM+D+ERGVVWEESII LP  +  VFLSAT+ NA +FA WI ++HKQ CHVVYTD+
Sbjct: 208 DEVHYMRDKERGVVWEESIILLPDTVHYVFLSATIPNAFEFASWIANIHKQACHVVYTDY 267

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RPTPL HY+FP GG+G+YLVVD++ +FRE+ F K   +     +G +  + + + +    
Sbjct: 268 RPTPLCHYLFPAGGNGIYLVVDKECKFREEGFNKALTSLGLDAVGIKTTSKQMNNK---- 323

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
                  D+ KI+ M+M+    PVIVFSF+R+E E  A + +++D  + +EK  + ++F 
Sbjct: 324 ------PDVIKIITMVMKNNLAPVIVFSFNRKELEVMAKTCNRMDLTSDDEKTIIAKIFN 377

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
           NA+ CLN EDR L  I  +LPLL +G+ +HHSGLLP++KE VE+LFQEGL+K LFATETF
Sbjct: 378 NAIQCLNAEDRKLEQITELLPLLLKGVGMHHSGLLPIMKETVEILFQEGLIKCLFATETF 437

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
           AMGLNMPA+TVVFT VKK+DG   RY+  GEYIQMSGRAGRRGKDD+G  I+MVD+++E 
Sbjct: 438 AMGLNMPARTVVFTNVKKYDGKETRYLRPGEYIQMSGRAGRRGKDDQGTVILMVDQKIEP 497

Query: 489 NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             LK+M+ GK  PL S+F L Y  +LNLM         E +I  SF QFQ    LP++ K
Sbjct: 498 TVLKNMIFGKADPLTSSFYLGYNMLLNLMKLEAAD--PEGLISKSFRQFQTNNKLPELQK 555

Query: 549 KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
           K+ +LEE+  +   + E  V   + LKL I Q  + +   I +   +L +L  GRL+ + 
Sbjct: 556 KLKELEEKEKTYIFTQEDIVKPLYHLKLAIDQHNENIHEAIYKESVLLPFLVDGRLVHIV 615

Query: 609 EGGT--DWGW-----------GVVVNVVKKPSAGV----GTLPSRGGGYIVPVQLPLIST 651
           +  T  D+GW           G V  +V      +    G L   G   I    +  IS 
Sbjct: 616 DKNTLFDFGWVPVLADRKRKVGTVSVIVSLKKGALQPTPGELGKGGNAGITSFNIDCISE 675

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQE-LESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQ 709
           +S +RL +P ++R  D   + L  +   ++ ++P   LP L+P+ DMKI D  V++ + +
Sbjct: 676 VSTLRLGLPDNVR--DNLDTFLFKINNAIKKKYPDFNLPVLDPINDMKINDQNVIESIKK 733

Query: 710 IEELEHKLFAHPLNKSQDENQIR----CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
           I+EL+ +      N+ Q ++  R     F  +  +  EI  L+S +  S+    +DEL+ 
Sbjct: 734 IKELKER-----WNQVQWDDITRKEFDMFVERENIREEISVLRSTVVQSKDVILKDELRG 788

Query: 766 RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
             RVLK+LG++  D ++Q KGR A  +  G+ELL+TEL+F+G F+ L+  Q  AL  CF+
Sbjct: 789 MRRVLKRLGYVSEDDIIQTKGRVAAELSAGNELLLTELLFSGVFSTLNAKQATALLGCFV 848

Query: 826 PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +K  EQ+    +L +    +  +A +IA I  +C+L +NV++Y+E   RP ++ ++  
Sbjct: 849 LDEKPKEQVQPPKDLEESFALIITNATRIANIMADCRLNINVNKYIEQ-FRPTMLPIVES 907

Query: 886 WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
           W  G TFA++IQ +D+FEGSIIR  RRL+E L Q+  A++ +G  +L KKF      ++R
Sbjct: 908 WCDGMTFAQLIQGSDLFEGSIIRGMRRLEELLVQMTDASKFMGNPDLAKKFEEGVTLIKR 967

Query: 946 GIMFSNSLYL 955
            I+F+ SLY+
Sbjct: 968 DIIFAASLYI 977


>gi|298711426|emb|CBJ32567.1| Superkiller viralicidic activity 2-like 2 (ATP-dependent helicase
            SKIV2L2) conserved hypothetical pr [Ectocarpus
            siliculosus]
          Length = 1034

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/950 (47%), Positives = 614/950 (64%), Gaps = 85/950 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            AK Y F LDPFQ+ ++  +ERNESVLVSAHTSAGKT  AEYAIA   RDKQRVIYTSP+K
Sbjct: 106  AKEYPFTLDPFQKQAIEYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIK 165

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQK+R+L +EF DVGLMTGD+T++P+A+CL+MTTEILR MLYRGSEV++EVAWVI+D
Sbjct: 166  ALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYD 225

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            EIHYM+D+ RGVVWEESII LP  ++ VFLSAT+ N+ +F  WI   H QPCHVVYTD+R
Sbjct: 226  EIHYMRDKNRGVVWEESIILLPHKVRFVFLSATIPNSKEFCGWIAKTHHQPCHVVYTDYR 285

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDTFLKQKIGGRRENGKASGRM 305
            P PL+HY+FP GG GL+LVVD K +FRE+NF     KLQ T  +Q +   ++   A  + 
Sbjct: 286  PVPLEHYIFPFGGEGLHLVVDNKGRFRENNFQKAMAKLQATPEEQAVAEGKKTFGAKKQA 345

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
             K G    GSD++KIV+++M+R   P IVFSF+++ECE +A+ MSKLDFN   EK  VEQ
Sbjct: 346  KKQGE---GSDLYKIVRLVMDRSLDPAIVFSFAKKECEGNALQMSKLDFNDDSEKLLVEQ 402

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
            VF NA++ L +EDR LP +E +LPLLKRG+ +HH GLLP++KE++E+LFQEGL+K LFAT
Sbjct: 403  VFGNAMESLADEDRQLPQVEAILPLLKRGVGIHHGGLLPILKEVIEILFQEGLIKILFAT 462

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
            ETF++GLNMPA+TVVFT  +K+DG   R+I SGEYIQMSGRAGRRGKDDRGI I M+DE+
Sbjct: 463  ETFSIGLNMPARTVVFTNTRKFDGQDFRWITSGEYIQMSGRAGRRGKDDRGIVIQMLDEK 522

Query: 486  MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
            M+    K M+ G+   L S++ +SY  +LN++   +     + ++K+SF+QFQ E + P 
Sbjct: 523  MDPQVAKGMLYGEADALNSSYHISYNMLLNMLRVEDAD--PDFLVKSSFNQFQQEASAPA 580

Query: 546  IGKKVSKLEEEAASLDA--SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
            + ++ S L+ E   L A  + E   +EY  ++  + +   ++   I RPE  L Y+ +GR
Sbjct: 581  LEEEASDLDSEKKVLAAGLNDEERTSEYFLVRQQLERTRAEVCRVIQRPENCLPYIQAGR 640

Query: 604  LIKVR---------------------------EGGTDWGWGVVVNVVKKPS--AG----- 629
            L+++R                           +   DWGWG  V++ KK S  AG     
Sbjct: 641  LVRMRGWPARHGDQDKKPDGREANGHQAELSFDNQPDWGWGATVDLNKKASSKAGDPAKY 700

Query: 630  -VGTL--------PSRGGGYIVP-------------VQLPLISTLSKIRLSVPPDLRPLD 667
             VG L          RGG +I P               L  I+ LS IRL +P DLR  +
Sbjct: 701  EVGVLVKCKPEESARRGGQHIYPPTPMEDGEMRVVHFTLDSIADLSSIRLMMPNDLRAAE 760

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
            AR ++   ++E   R               I+D  +  L+ +  +L+ +L   P +  +D
Sbjct: 761  ARAAVAENMKEAFRR---------------IQDSSLEKLLARETQLQLRLEGLPFHSDKD 805

Query: 728  -ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
             E Q++ +     +  + + L+ + +  Q    +DE++ R RVL++LGH D+DGV+QLKG
Sbjct: 806  REEQLQRYTAVQHLADKAKLLRKEAKGVQHMVMKDEMRRRKRVLRRLGHCDSDGVIQLKG 865

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI-NLRMELAKPLQ 845
            R AC I+T DEL+VTEL+F+G F +L   Q AAL SC +   K+ E   +L  EL  P +
Sbjct: 866  RVACEINTCDELVVTELIFSGAFTELSPEQSAALLSCMVHQAKTDETAPSLPAELQGPFR 925

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            QLQ++AR IA +  E K+ +  +EYV S     +M+  + WS GA+F+EVI+  D FEGS
Sbjct: 926  QLQDAARHIAGVSEEAKITIETEEYVNSFTAS-MMEATFAWSNGASFSEVIERADDFEGS 984

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            IIR  RRL+E L QL  A+ A+G + L+ KF  A+  +RRGI+F+ SLYL
Sbjct: 985  IIRVFRRLEELLRQLSQASAAIGNMELKTKFEQAANKIRRGIVFAASLYL 1034


>gi|346973138|gb|EGY16590.1| ATP-dependent RNA helicase DOB1 [Verticillium dahliae VdLs.17]
          Length = 1106

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/953 (45%), Positives = 611/953 (64%), Gaps = 72/953 (7%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+T++F+LDPFQ +SVA +ER+ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTSP
Sbjct: 161  EPARTWNFKLDPFQSLSVASIERDESVLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSP 220

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGD+T++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 221  IKALSNQKYRDFEAMFGDVGLMTGDITINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 280

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +HKQ CHVVYTD
Sbjct: 281  FDEIHYMRDKTRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHKQACHVVYTD 340

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA- 306
            FRPTPLQ+Y FP GG G+YLVVDEK  F+E+NF   Q T  + +    ++ G A+ +   
Sbjct: 341  FRPTPLQNYFFPAGGKGIYLVVDEKGVFKENNF---QKTMQEVEQSKGQDPGDANAKWKG 397

Query: 307  --------KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
                    KGG     +DI KIV+MIM +KFQPVIVF+FS+RECE  A+ +S L FNT  
Sbjct: 398  KGNNKKTQKGGGADPKADIVKIVRMIMTKKFQPVIVFNFSKRECENLAVGLSSLQFNTDN 457

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            EK  V  VF NA+  L+++DR LP I  +LPLL+RGI VHHSGLLP++KE +E+LFQE L
Sbjct: 458  EKAMVRHVFNNAIKSLSDQDRELPQISNLLPLLERGIGVHHSGLLPILKETIEILFQESL 517

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            +K L ATETF++GLNMPAKTVVFT V KWDG   R +   EYIQMSGRAGRRG D RGI 
Sbjct: 518  IKVLVATETFSIGLNMPAKTVVFTQVTKWDGVKTRPLTPSEYIQMSGRAGRRGLDSRGIV 577

Query: 479  IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            I+M+DE+ME +T + +V+G+   L S F L Y  ILNL+ R E   + E +++  FHQFQ
Sbjct: 578  IMMIDEKMEPDTARGIVVGQQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQ 635

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
               ++PD+ + + +L++E  +   + E+ V +Y+ ++  + Q    + + I  P   L +
Sbjct: 636  NAASVPDLERGLVQLQQEKDNFVITDESTVKDYYNIRTQLEQFAMDMRAVIQHPSHCLDF 695

Query: 599  LGSGRLIKVRE--------GGTDWGWGVVVNVVKK--PSAGVG--------------TLP 634
            L  GRL+++           GTD+GWGVV N  K+  P +  G               LP
Sbjct: 696  LQPGRLVRIYNPKLQEASLDGTDFGWGVVANFTKRRAPDSRKGEPEYPPQESIMIDVMLP 755

Query: 635  -----------------------------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                                         S     IVP  L  + ++S+IR+ +P D+  
Sbjct: 756  ISPDSDEITQGFNITTEMPKNVYPESTSNSPARFEIVPCLLTCLKSISQIRVFMPKDINS 815

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
              ++  +  ++ E+  RFP GLP L+P+++M I+D   + L+ +IE LE +L  +PL+ S
Sbjct: 816  QASKDQVRRSLLEVTRRFPDGLPILDPMENMGIKDESFIKLLRKIEVLESRLLTNPLHGS 875

Query: 726  QDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
                ++   ++ K ++  EI++ K  +  +      DELK R RVL++LG ++   VVQL
Sbjct: 876  PLLPELYLQYRAKVKLGEEIKEKKKGIAKAHSISQMDELKARKRVLRRLGFLNESEVVQL 935

Query: 785  KGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            K R AC + +  G EL++ EL+F+  FN+L    +AA+ SCF+ +D+  E   L+ EL K
Sbjct: 936  KARVACELSSTEGHELILAELLFDRFFNELAPETIAAVLSCFV-LDEKLEAQPLKEELDK 994

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            P + +   AR++A++  E K+++N +E+V    +  LM+ ++ WS   +FA++ +MT+ +
Sbjct: 995  PFRAILAKARQVAKVSIESKMDINEEEFV-GKFKWQLMETVHAWSNEKSFADICKMTNAY 1053

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGS+IR  RRL+E L Q+   A+ +G   L+ KF A+   +RR I+ + SLYL
Sbjct: 1054 EGSLIRLFRRLEELLRQMAQGAKVMGSEELQVKFEASLNKIRRDIVAAQSLYL 1106


>gi|290977274|ref|XP_002671363.1| predicted protein [Naegleria gruberi]
 gi|284084931|gb|EFC38619.1| predicted protein [Naegleria gruberi]
          Length = 1130

 Score =  826 bits (2133), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 455/1029 (44%), Positives = 636/1029 (61%), Gaps = 121/1029 (11%)

Query: 38   CVHEVAVPSGYALTK---------DEAIHGTFANP--VYNGEM-------------AKTY 73
            C+HE+A+P  Y++            E      +NP  + N  M             AK Y
Sbjct: 112  CLHEIALPPNYSINSQTGVGSVDGSEVSSNVLSNPSEIVNFMMEQKTQVELGLKQAAKEY 171

Query: 74   SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
             F LD FQR +V  +E ++SVLVSAHTSAGKTAVAEYAIA + +D  RVIYTSP+KALSN
Sbjct: 172  PFTLDAFQRQAVRAIELSQSVLVSAHTSAGKTAVAEYAIAKSLKDGSRVIYTSPIKALSN 231

Query: 134  QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
            QK+REL +EF DVGLMTGDVT++PN+SC+VMTTEILR MLYRGSE+L EV WVIFDE+HY
Sbjct: 232  QKFRELQEEFTDVGLMTGDVTINPNSSCIVMTTEILRSMLYRGSEILNEVQWVIFDEVHY 291

Query: 194  MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
            M+D+ERGVVWEE++I LP ++K VFLSATM NAT+FA WI  L  QP HVVYTD+RPTPL
Sbjct: 292  MRDKERGVVWEETLILLPNSVKYVFLSATMPNATEFAGWIAKLKGQPVHVVYTDYRPTPL 351

Query: 254  QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG 313
            QHY++PVGG G++LVVD K  F++DN+ K  +  L          G  SG +   G  SG
Sbjct: 352  QHYIYPVGGQGIHLVVD-KHTFKQDNWKKAVEE-LNNASKNVTSGGSGSGNVNSSGKVSG 409

Query: 314  G-------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
            G       + + K+V MIM+R FQPVIVFSFSR+ECE  A+S+SK +FN +EE   V +V
Sbjct: 410  GDRKKRVDTSLVKLVNMIMKRNFQPVIVFSFSRKECETRAVSLSKSNFNDEEEMSLVAEV 469

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
            F NA+D L++EDR LP +E MLPLL++GI VHHSGLLP++KE++E+LFQEGL+K LFATE
Sbjct: 470  FNNAIDSLSDEDRKLPQVETMLPLLQKGIGVHHSGLLPIMKEVIEILFQEGLIKVLFATE 529

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI-IMVDEQ 485
            TFAMGLNMPAKTV+FT ++K+DG   R + SGEYIQMSGRAGRRG DD+GI I IM D  
Sbjct: 530  TFAMGLNMPAKTVLFTGIEKYDGQITRRLTSGEYIQMSGRAGRRGLDDKGIVILIMDDPD 589

Query: 486  MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
            +     K ++ G    L S+F LSYY +LNL+ R E + T E++++ SF Q+Q EK    
Sbjct: 590  LREEDAKQLMNGIADCLNSSFHLSYYMVLNLL-RVE-EITPEYIMERSFFQYQSEKKRLA 647

Query: 546  IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
              + +++   +  S+    E +++ Y+ +K ++      L   IT P+  +  L +GRL+
Sbjct: 648  FEQTLNETIVKRDSMKIENEPQLSSYYNMKKELENEYNNLRKLITTPKYSIPVLSAGRLL 707

Query: 606  KVREGGTDWGWGVVVNVVKKPSA-GVGTLPSRGGGYIVPVQL------------------ 646
            ++      +GWG+++   KK  A  +    ++   Y++ + L                  
Sbjct: 708  RI----NGFGWGILIKFTKKKHAEKLQINQTKSSDYLIDILLPSHPDKPNEPYPVKEYKK 763

Query: 647  -----PLISTLS----------KIRLSVPPDLRPLDAR----QSILLAVQELESRFPQ-- 685
                 P+I TLS          K+ LS     RP DA     +S +L + E  SRF    
Sbjct: 764  SLEPKPIIKTLSVDLIECYSSVKVYLSKEMKSRP-DANSGEAKSTILKLLETISRFKSQP 822

Query: 686  --------------------GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL--- 722
                                 +P+L+ V++M I   +V ++V+ I++LE +L   P    
Sbjct: 823  TTETTDGMMSIDKLSVYKYGDVPRLDLVEEMGIARAQVKNVVDTIQQLESRLSYSPFYQY 882

Query: 723  -------NKSQDE----NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
                   N S+D+    NQI  F+ K E+ +EI+ LK +++ +     ++ELKN  RVL+
Sbjct: 883  ELNASNGNASKDDINYKNQIALFESKLEIENEIEALKKQIKTTGQVVMKEELKNMMRVLR 942

Query: 772  KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS 831
            +LG    D V+  KGR AC + + D L++TE+++NG F+DL   Q  A+ SCF     SS
Sbjct: 943  RLGFATEDNVITAKGRVACELSSADSLVITEMIYNGAFSDLTPEQCIAVLSCFASEVTSS 1002

Query: 832  EQIN-----LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
            +        L  EL KP ++L+++AR++AE+  E KLE++ D+Y++S     +M++ + W
Sbjct: 1003 QNRQDDKDALVDELKKPYEELEKAARRVAEVSIESKLELDTDKYLQS-FPCNMMNLTFAW 1061

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
              GA F ++ +MT+IFEGSI+RS RR +E + Q+ AAA+A+GE  +EKK     E +RR 
Sbjct: 1062 CNGAKFVDICKMTEIFEGSIVRSMRRCEEIVRQMCAAAKAIGEETIEKKLLIGLEKMRRD 1121

Query: 947  IMFSNSLYL 955
            I+FS+SLYL
Sbjct: 1122 IVFSSSLYL 1130


>gi|171688888|ref|XP_001909384.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944406|emb|CAP70516.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1082

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/948 (46%), Positives = 619/948 (65%), Gaps = 65/948 (6%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+ Y F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTSP
Sbjct: 140  EPARVYPFKLDPFQALSVASIERGESVLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSP 199

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+   EF DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 200  IKALSNQKYRDFQAEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 259

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTD
Sbjct: 260  FDEIHYMRDKTRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTD 319

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA------ 301
            FRPTPLQ+Y FP GG G++L+VDEK  F+E+NF    +     K G    +  A      
Sbjct: 320  FRPTPLQNYFFPAGGKGIFLIVDEKGNFKENNFQHAMNLIEANK-GSDPADWSAKRKGKG 378

Query: 302  --SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
                    G + +  +DI KI++MI+++KFQPVIVF+FS+R+CEQ A+  S + FN  +E
Sbjct: 379  KDKKTNKGGDAPNETADIAKIIRMIVKKKFQPVIVFNFSKRDCEQMALKSSHMKFNAPDE 438

Query: 360  KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
            +  V++VF+NA+  L++ED+NL  I  +LPLL++GI VHHSGLLP++KE +E+LFQEGL+
Sbjct: 439  ELMVDKVFENALQQLSDEDKNLAQITNILPLLRKGIGVHHSGLLPILKETIEILFQEGLI 498

Query: 420  KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
            K LFATETF++GLNMPA+TVVFT V KWDG + R + S EYIQM+GRAGRRG DDRGI I
Sbjct: 499  KVLFATETFSIGLNMPARTVVFTQVTKWDGVARRPLTSSEYIQMAGRAGRRGLDDRGIVI 558

Query: 480  IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
            +MVD++++ +T K +V+G    L S F L Y  ILNL+ R E   + E +++  F QFQ 
Sbjct: 559  MMVDDKLDPDTAKSVVVGHQDRLNSAFHLGYNMILNLL-RIEA-ISPEFMLERCFFQFQN 616

Query: 540  EKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
              ++P + K+++ L+EE  ++    E+ V +Y+ L+  + +L K + S I  P   + ++
Sbjct: 617  AASVPQLEKELTALQEEKDAMLLPDESTVKDYYHLREQLKELTKDMTSVIHHPANCMEFM 676

Query: 600  GSGRLIKVREG-GTDWGWGVVVNVV--KKPSAGVGTLP---------------------- 634
              GR+I++    G ++GWGV+ ++V  K P  G    P                      
Sbjct: 677  QPGRVIQIETPEGVNFGWGVLFDIVARKAPKHGESDYPPQEQYFCDVLLKLSKESKSFNP 736

Query: 635  ------SRGGGYI------------------VPVQLPLISTLSKIRLSVPPDLRPLDARQ 670
                   +GG +I                  VP  L  + +LS++R+ +P D+R  + ++
Sbjct: 737  AVRETSKKGGKFIMPEGQIPEQADEEGEWEVVPCLLSCVKSLSQLRVFLPKDVRSREEKE 796

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ 730
            ++  ++ E++ RF  G+P ++P+++M I D     L+ +IE LE +L A+PL+ S    +
Sbjct: 797  NVGKSLLEIQRRFADGIPIMDPIENMNIRDDSFRKLLRKIEVLESRLLANPLHNSPLLPR 856

Query: 731  I-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAA 789
            +   F+ K ++  +I++ +  +  +      DELK+R RVL++LG ID   VVQ+K R A
Sbjct: 857  LYEEFEAKTKLTEQIKEKRKAIGKAHTIAQLDELKSRKRVLRRLGFIDEKEVVQMKARVA 916

Query: 790  CLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
            C I +  G ELL+ EL+FN  FN+L     AA+ S FI  D+  E   L+ ELAKP +++
Sbjct: 917  CEISSTEGHELLLAELLFNRFFNELTPEVTAAILSVFI-FDEKVETDALKEELAKPFREV 975

Query: 848  QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
            Q  A+ IA++  E KL+VN +EYV S ++  LM+ +  W+ G  FAE+ +MT+ +EGS+I
Sbjct: 976  QAQAKIIAKVSAESKLDVNEEEYVNS-LKWQLMETVMAWANGRPFAEISKMTNAYEGSLI 1034

Query: 908  RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            R  RRL+E L Q+  AA+ +G   L++KF AA   +RR I+  NSLYL
Sbjct: 1035 RLFRRLEELLRQMAEAAKVMGSDELKEKFEAALGKIRRDIVSFNSLYL 1082


>gi|380491796|emb|CCF35066.1| DSHCT domain-containing protein [Colletotrichum higginsianum]
          Length = 1110

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/958 (46%), Positives = 611/958 (63%), Gaps = 78/958 (8%)

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
             E A+ Y+F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTS
Sbjct: 162  AEPARKYNFKLDPFQSLSVASIEREESVLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTS 221

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV
Sbjct: 222  PIKALSNQKYRDFEALFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWV 281

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            +FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYT
Sbjct: 282  VFDEIHYMRDKTRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYT 341

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS--GR 304
            DFRPTPLQ+Y FP GGSG++LVVDEK  FRE NF K     ++   G    N  AS  G+
Sbjct: 342  DFRPTPLQNYFFPAGGSGIFLVVDEKGVFREGNFQKTM-ALIEAGKGQDPSNASASWKGK 400

Query: 305  MAKGGSGSGG------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
             AK  +  GG      +DI KIV+MIM++ F P I+F+FS++E E  A+ +S   FN   
Sbjct: 401  GAKKQTQKGGAAADMKADISKIVRMIMQKSFHPTIIFNFSKKEVENLALQISHFQFNNDS 460

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            E+  V+ VF NA+  L+E DR LP I+ +LPLL++GI VHHSGLLP++KE +E+LFQE L
Sbjct: 461  EQAMVKTVFNNAIQSLSEADRELPQIQNLLPLLQKGIGVHHSGLLPILKETIEILFQESL 520

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            +K L ATETF++GLNMPAKTVVFT V KWDG   R +   EYIQMSGRAGRRG D RGI 
Sbjct: 521  IKVLVATETFSIGLNMPAKTVVFTQVTKWDGTQRRPLTPSEYIQMSGRAGRRGLDSRGIV 580

Query: 479  IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            I+M+D++ME +T + +V+G+   L S F L Y  ILNL+ R E   + E +++  FHQFQ
Sbjct: 581  IMMIDDKMEPDTARAIVVGEQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQ 638

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
               ++P + + +  L++E  ++  + EA V +Y+ L+  + Q    + + I  PE    +
Sbjct: 639  TGASVPALERDLMSLQQERDNMSIADEATVKDYYNLRNQLEQYTSDMRAVIQHPEHCGDF 698

Query: 599  LGSGRLIKVRE--------GGTDWGWGVVVN-------------------------VVKK 625
            +  GRL+++ +        GGTD+GWGVV +                         VV +
Sbjct: 699  MQPGRLVRIHDPKKTNNTVGGTDFGWGVVADLIRRQRKSNEPEIPPQESCIIDVMMVVDQ 758

Query: 626  PSAGV--------GTLPS------------RGGGY-IVPVQLPLISTLSKIRLSVPPDLR 664
             SA V        G LPS             G  + IVP  L  +  +S+IR+ +P D R
Sbjct: 759  KSAPVAEGAKLASGDLPSGLVPYPKPEQPDNGARFEIVPCLLTCVKAISQIRVFMPKDCR 818

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
               A Q +  +++E+  RFP GLP L+PV++M I D     L+ +IE LE +L  +PL+ 
Sbjct: 819  SQAALQEVGNSLREVHRRFPDGLPILDPVENMGINDDAFRSLMKKIEMLEARLLTNPLHG 878

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFR-----DELKNRSRVLKKLGHIDAD 779
            S    Q+    R  E   E  Q+K+K R  +I +       DELK R RVL++LG ++  
Sbjct: 879  SPLLPQLYLQYRAKEKLTE--QIKAKKR--EIARLHSIAQMDELKARKRVLRRLGFLNES 934

Query: 780  GVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
             VV+LK R AC I +  G EL++ EL+F+  FN+L    +AA  SCF+ +D+  E   LR
Sbjct: 935  EVVELKARVACEISSTEGHELVLAELLFDRFFNELSPELIAATLSCFV-LDEKLETAALR 993

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
             ELAKP +++Q  A+++A++  E KLE+N +EY+ +  +  LM+ +Y W++G  FAE+ +
Sbjct: 994  EELAKPYREVQAKAKQVAKVSRESKLELNEEEYL-AGFKWQLMETVYAWAQGKPFAEICK 1052

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            MT+ +EGS+IR  RRL+E L Q+   A+ +G   L +KF  +   +RR I+ + SLYL
Sbjct: 1053 MTNAYEGSLIRLFRRLEELLRQMGQGAKVMGSDELTQKFEDSLAKIRRDIVAAQSLYL 1110


>gi|312079065|ref|XP_003142013.1| hypothetical protein LOAG_06429 [Loa loa]
          Length = 1043

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/952 (44%), Positives = 617/952 (64%), Gaps = 66/952 (6%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEV +P          +      P      AK Y F+LD FQR ++ C++ + SVLV
Sbjct: 125  NCSHEVVLPPNMEYV---PLKPRTTAP------AKMYEFQLDAFQREAITCIDNSHSVLV 175

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VA YAIAM+ RDKQRVIYTSP+KALSNQKYREL +EF DVGLMTGD TL+
Sbjct: 176  SAHTSAGKTVVALYAIAMSLRDKQRVIYTSPIKALSNQKYRELEEEFGDVGLMTGDNTLN 235

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASC+VMTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  +  
Sbjct: 236  PDASCIVMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDTVHY 295

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFA+W+ +LH QP HV+YTD+RP PLQH+++P GGSGLY VV+ +  FR
Sbjct: 296  VFLSATIPNARQFADWVVYLHDQPVHVIYTDYRPVPLQHFIYPAGGSGLYEVVNMQGIFR 355

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            ED F +  +     ++G   + G       K G  SG   +  I++ + ER   PVI+FS
Sbjct: 356  EDKFTEAMNVL--SQVG---DAGHGGINKGKKGGTSGTPHVVNIIRTLKERDMIPVIIFS 410

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FSR+ECE +A  M+ LDFNT++EK  V+++F NA+  L++ED  LP I  +LPLL RGI 
Sbjct: 411  FSRKECEAYATQMTNLDFNTEDEKAKVKEIFVNAISLLSDEDSKLPEIGRVLPLLLRGIG 470

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHHSGLLP++KE++E+LF EGL+K LFATETFAMGLNMPA+TV+FT+ +K+DG  +R+I 
Sbjct: 471  VHHSGLLPIVKEVIEILFGEGLIKTLFATETFAMGLNMPARTVLFTSARKFDGKDYRWIT 530

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRGKDDRG+ I+MVD+QM  +  K ++ G P PL S FRL+Y  +LNL
Sbjct: 531  SGEYIQMSGRAGRRGKDDRGLVILMVDQQMGQDVAKQIIKGAPDPLNSQFRLTYNMVLNL 590

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R EG    E +++NSF+QFQ   ALP +   V + +EE A+     E E++ Y++++ 
Sbjct: 591  L-RVEG-INPEFMLENSFYQFQNYDALPQLYGNVERKKEELAAYKIDRETEISGYYQMEK 648

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--PSAGVG--- 631
             +  L++ +   + +P+ ++ +L +GRL+ +     D+GW  +++  KK  P   +G   
Sbjct: 649  QVDVLKEAVKEVVMKPKHLIPFLQAGRLLHIVSNDKDFGWAALLDFHKKANPVDPLGLDL 708

Query: 632  ---------------------------TLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
                                           +G   +V V +  +S +S  R+ +P +L+
Sbjct: 709  MYVLDVLMLLSAESAKNLSDITQLRPPNANEKGVVEVVSVAISCVSEISAARVKLPQNLK 768

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              + +QS    ++E+  RF   +P L+P+ DMKI D  + + +++++ LE +  +HPL  
Sbjct: 769  AYEGKQSAGRVIKEVLKRFNGIMPLLDPLNDMKINDLVLQENISKLQALEKRKDSHPLRA 828

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            +   ++I + +++K E+  E++  K++++ +Q     DELK R RVL++L + D + V+ 
Sbjct: 829  NSKFDEIYKQYEKKLELEAELKVAKTELKKAQSLLQLDELKCRKRVLRRLQYCDENDVIT 888

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR +C +   DEL++TE+MF G F +L   Q+AAL SCF+  +K+     L  +L+  
Sbjct: 889  QKGRVSCEVSAADELMLTEMMFGGIFTELATPQLAALLSCFVFEEKAG-GTKLADDLSGC 947

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            L+ +QE AR+IA++  E KLE++ D+YVES  +P LMDV++ W                 
Sbjct: 948  LRAMQEYARRIAKVTKESKLEIDEDKYVES-FKPHLMDVVHAWCT--------------- 991

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            GSIIR  RRL+E L ++  A++A+G  +LE +F  A   L+R I+F+ SLYL
Sbjct: 992  GSIIRCMRRLEELLREMVGASKAIGNGDLEARFEEARVLLKRDIVFTASLYL 1043


>gi|302413749|ref|XP_003004707.1| ATP-dependent RNA helicase DOB1 [Verticillium albo-atrum VaMs.102]
 gi|261357283|gb|EEY19711.1| ATP-dependent RNA helicase DOB1 [Verticillium albo-atrum VaMs.102]
          Length = 1107

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/953 (45%), Positives = 611/953 (64%), Gaps = 72/953 (7%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+T++F+LDPFQ +SVA +ER+ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTSP
Sbjct: 162  EPARTWNFKLDPFQSLSVASIERDESVLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSP 221

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGD+T++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 222  IKALSNQKYRDFEAMFGDVGLMTGDITINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 281

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +HKQ CHVVYTD
Sbjct: 282  FDEIHYMRDKTRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHKQACHVVYTD 341

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA- 306
            FRPTPLQ+Y FP GG G+YLVVDEK  F+E+NF   Q T  + +    ++ G A+ +   
Sbjct: 342  FRPTPLQNYFFPAGGKGIYLVVDEKGVFKENNF---QKTMQEVEQSKGQDPGDANAKWKG 398

Query: 307  --------KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
                    KGG     +DI KIV+MIM +KFQPVIVF+FS+RECE  A+ +S L FNT  
Sbjct: 399  KGNNKKTQKGGGADPKADIVKIVRMIMTKKFQPVIVFNFSKRECENLAVGLSSLQFNTDN 458

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            EK  V  VF NA+  L+++DR LP I  +L LL+RGI VHHSGLLP++KE +E+LFQE L
Sbjct: 459  EKAMVRHVFNNAIKSLSDQDRELPQISNLLALLERGIGVHHSGLLPILKETIEILFQESL 518

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            +K L ATETF++GLNMPAKTVVFT V KWDG   R +   EYIQMSGRAGRRG D RGI 
Sbjct: 519  IKVLVATETFSIGLNMPAKTVVFTQVTKWDGVKTRPLTPSEYIQMSGRAGRRGLDSRGIV 578

Query: 479  IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            I+M+DE+ME +T + +V+G+   L S F L Y  ILNL+ R E   + E +++  FHQFQ
Sbjct: 579  IMMIDEKMEPDTARGIVVGQQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQ 636

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
               ++PD+ + + +L++E  +   + E+ V +Y+ ++  + Q    + + I  P   L +
Sbjct: 637  NAASVPDLERGLVQLQQEKDNFVITDESTVKDYYNIRTQLEQFAMDMRAVIQHPSHCLDF 696

Query: 599  LGSGRLIKVRE--------GGTDWGWGVVVNVVKK--PSAGVG--------------TLP 634
            L  GRL+++           GTD+GWGVV N  K+  P +  G               LP
Sbjct: 697  LQPGRLVRIYNPKLQEASLDGTDFGWGVVANFTKRRAPDSRKGEPEYPPQESIMIDVMLP 756

Query: 635  -----------------------------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRP 665
                                         S     IVP  L  + ++S+IR+ +P D+  
Sbjct: 757  ISPDSDEITQGFNITTEMPKNVYPESTSNSPARFEIVPCLLTCLKSISQIRVFMPKDINS 816

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
              ++  +  ++ E+  RFP GLP L+P+++M I+D   + L+ +IE LE +L  +PL+ S
Sbjct: 817  QASKDQVRRSLLEVTRRFPDGLPILDPMENMGIKDESFIKLLRKIEVLESRLLTNPLHGS 876

Query: 726  QDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
                ++   ++ K ++  EI++ K  +  +      DELK R RVL++LG ++ + VVQL
Sbjct: 877  PLLPELYLQYRAKVKLGEEIKEKKKGIAKAHSISQMDELKARKRVLRRLGFLNENEVVQL 936

Query: 785  KGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            K R AC + +  G EL++ EL+F+  FN+L    +AA+ SCF+ +D+  E   L+ EL K
Sbjct: 937  KARVACELSSTEGHELILAELLFDRFFNELAPETIAAVLSCFV-LDEKLEAQPLKEELDK 995

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            P + +   AR++A++  E K+++N +E+V    +  LM+ ++ WS   +FA++ +MT+ +
Sbjct: 996  PFRAILAKARQVAKVSIESKMDINEEEFV-GKFKWQLMETVHAWSNEKSFADICKMTNAY 1054

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EGS+IR  RRL+E L Q+   A+ +G   L+ KF A+   +RR I+ + SLYL
Sbjct: 1055 EGSLIRLFRRLEELLRQMAQGAKVMGSEELQVKFEASLNKIRRDIVAAQSLYL 1107


>gi|408388817|gb|EKJ68496.1| hypothetical protein FPSE_11504 [Fusarium pseudograminearum CS3096]
          Length = 1094

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/946 (46%), Positives = 611/946 (64%), Gaps = 64/946 (6%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T++F+LDPFQ +SVA +ER ES+LVSAHTSAGKT VAEYAIA   +  QRVIYTSP+K
Sbjct: 153  ARTWNFKLDPFQSLSVASIEREESILVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIK 212

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+FD
Sbjct: 213  ALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFD 272

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            EIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTDFR
Sbjct: 273  EIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFR 332

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----GRRENGKASGR 304
            PTPLQ+Y FP GGSG  L+VDEK  F E NF K+     ++K         R+ GK   +
Sbjct: 333  PTPLQNYFFPAGGSGARLIVDEKSNFNEQNFNKVMQEVEEKKGADPNDPNARQKGKGKNK 392

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                G    GSDI KI++M +++KF PVIVF+FS+RECE  AM++S L FN   EK  V 
Sbjct: 393  KTNKGGADNGSDIAKIIRMTIKKKFNPVIVFNFSKRECENMAMNISSLSFNDDSEKAMVR 452

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            +VF NA++ L+E+DR LP I  +LPLL+RGI VHHSGLLP++KE +E+LFQE L+K LFA
Sbjct: 453  KVFHNAIESLSEQDRELPQIINLLPLLERGIGVHHSGLLPILKETIEILFQESLIKVLFA 512

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETF++GLNMPAKTVVFT V KWDG   R + S EYIQM+GRAGRRG D RGI I+M+D+
Sbjct: 513  TETFSIGLNMPAKTVVFTQVTKWDGVKRRPLTSSEYIQMAGRAGRRGLDARGIVIMMIDD 572

Query: 485  QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            ++E +T K++V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ   ++P
Sbjct: 573  KLEPDTAKEIVTGHQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAASVP 630

Query: 545  DIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRL 604
             + K++  L++E  S   + E+ V +Y++++  ++   + + + I  P   + YL  GRL
Sbjct: 631  SLEKELMSLQQERDSTTIADESTVKDYYQIRQQLSAYTRDMRTVIQHPNYSISYLQPGRL 690

Query: 605  IKVRE----------GGTDWGWGVVVNVVKKPSAGVGT--------------LP-SRGGG 639
            +++             GTD+GWGV+VN   + +  +                LP SR   
Sbjct: 691  VQIYNPKDENESIAGNGTDFGWGVIVNQTPRRAPKLNEPEYIPQEAHVIDVLLPISRSSA 750

Query: 640  --------------------------YIVPVQLPLISTLSKIRLSVPPD-LRPLDARQSI 672
                                       +VP  L  I  +S+IRL +P + L+    + ++
Sbjct: 751  DFHPGHPAEEMPPGIKPCNDDDDFKFAVVPCLLTCIKAISQIRLFLPKEGLKSDSDKDTL 810

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI- 731
              ++ E++ RFP GLP L+P+++M+I D     L+ +IE LE +L A+PL+ S     + 
Sbjct: 811  TKSLMEVKRRFPDGLPVLDPIENMEITDDSFKKLLRKIEVLESRLLANPLHLSPLLPSLW 870

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
              +  K ++  ++++ K  +  +      DELK+R RVL++LG I+   VVQLK R AC 
Sbjct: 871  DQYHAKVKLTDKVKETKKSIAKAYSIAQMDELKSRKRVLRRLGFINDAEVVQLKARVACE 930

Query: 792  IDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            + +  G ELL++EL+F+  FN+L     AA+ SCFI  D+  E   L+ EL KP +++Q 
Sbjct: 931  VSSTEGHELLLSELLFDRFFNELTPEMCAAVMSCFI-FDEKVEAPALKEELQKPYREIQA 989

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRS 909
             AR IA++  ECKL+VN +EY +  ++  LM+ +Y W++G  F E+ +MT+++EGS+IR 
Sbjct: 990  KARIIAKVSQECKLDVNEEEYAQK-LKWQLMETVYTWAQGRPFVEICKMTNVYEGSLIRL 1048

Query: 910  ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             RRL+E L Q+  AA+ +G  +L KKF  +   +RR I+ + SLYL
Sbjct: 1049 FRRLEELLRQMAQAAKVMGNEDLTKKFEESLSKIRRDIVAAQSLYL 1094


>gi|302907162|ref|XP_003049585.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730521|gb|EEU43872.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1090

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 443/950 (46%), Positives = 615/950 (64%), Gaps = 68/950 (7%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+T++F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTSP
Sbjct: 147  EPARTWNFKLDPFQSLSVASIEREESVLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSP 206

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 207  IKALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 266

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTD
Sbjct: 267  FDEIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTD 326

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF-VKLQDTFLKQKIGG------RRENGK 300
            FRPTPLQ+Y FP GGSG  L+VDEK  F E NF + +Q+  +++K G        R+ GK
Sbjct: 327  FRPTPLQNYFFPAGGSGARLIVDEKSNFNEQNFNLVMQE--VEEKKGADPNDPTARQKGK 384

Query: 301  ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
               +    G    GSDI KI++M +++KF PVIVF+FS+RECE  AM++S L FN   EK
Sbjct: 385  GKNKKTNKGGADSGSDIAKIIRMTIKKKFNPVIVFNFSKRECENMAMNISSLSFNDDSEK 444

Query: 361  DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
              V++VF +A++ L+E+DR LP I  +LPLL+RGI VHHSGLLP++KE +E+LFQE L+K
Sbjct: 445  AMVKKVFHSAIESLSEQDRELPQIVNLLPLLERGIGVHHSGLLPILKETIEILFQESLIK 504

Query: 421  ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
             LFATETF++GLNMPAKTVVFT V KWDG   R + S EYIQM+GRAGRRG D RGI I+
Sbjct: 505  VLFATETFSIGLNMPAKTVVFTQVTKWDGVKRRPLTSSEYIQMAGRAGRRGLDARGIVIM 564

Query: 481  MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            M+D+++E +T K++V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ  
Sbjct: 565  MIDDKLEPDTAKEIVTGHQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNA 622

Query: 541  KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
             ++P + K +  L++E  ++    EA V +Y++++  ++   K + + I  P   + YL 
Sbjct: 623  ASVPSLEKDLMSLQQERDTMSIPDEATVKDYYQIRQQLSTYTKDMRTVIQHPNYSISYLQ 682

Query: 601  SGRLIKVRE----------GGTDWGWGVVVNVVKK------------------------- 625
             GRL+++             GTD+GWGV+VN   +                         
Sbjct: 683  PGRLVQIYNPKDDQETVAGNGTDFGWGVIVNQTPRRGPKLGEPEHIPQESYVIDVLLPIS 742

Query: 626  -------PSAGVGTLPSRGGGY---------IVPVQLPLISTLSKIRLSVPPD-LRPLDA 668
                   P    G +P     +         IVP  L  I  +S+IRL +P D L+    
Sbjct: 743  RKSAEIAPGQPAGEMPPGLKPFSDDDDIKFAIVPCLLTCIKAISQIRLFLPKDGLKTDGD 802

Query: 669  RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE 728
            R+++  ++ E++ RFP GLP L+P+++M+I D     L+ +IE LE +L A+PL+ S   
Sbjct: 803  RETLTKSLMEVKRRFPDGLPILDPIENMEITDESFKKLLRKIEVLESRLLANPLHLSPLL 862

Query: 729  NQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
              +   +  K ++  ++++ K  +  +      DELK+R RVL++LG I+   VVQLK R
Sbjct: 863  PSLWEQYHTKVKLTDKVKETKKAIAKAYSIAQMDELKSRKRVLRRLGFINDAEVVQLKAR 922

Query: 788  AACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
             AC + +  G ELL++EL+F+  FN+      AA+ S FI  D+  E   L+ EL KP +
Sbjct: 923  VACEVSSTEGHELLLSELLFDRFFNEQTPEMCAAVMSIFI-FDEKVEAPALKEELQKPFR 981

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            ++Q  AR IA++  ECKL+VN +EYV+  ++  LM+ +Y W++G  F E+ +MT+++EGS
Sbjct: 982  EVQAKARIIAKVSQECKLDVNEEEYVQK-LKWQLMETVYTWAQGRPFVEICKMTNVYEGS 1040

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +IR  RRL+E L Q+  AA+ +G  +L KKF  +   +RR I+ + SLYL
Sbjct: 1041 LIRLFRRLEELLRQMAQAAKVMGNEDLTKKFEDSLAKIRRDIVAAQSLYL 1090


>gi|402084399|gb|EJT79417.1| FRQ-interacting RNA helicase [Gaeumannomyces graminis var. tritici
            R3-111a-1]
          Length = 1113

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/976 (45%), Positives = 615/976 (63%), Gaps = 63/976 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L  +  H+VA+P        + I+   +      E A+ Y F+LDPFQ +SVA +ER ES
Sbjct: 147  LQHNVQHQVALPPDL-----DYIYVPLSQHKPPDEPARVYRFKLDPFQSISVASIERGES 201

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 202  VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYREFQAEFGDVGLMTGDV 261

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D  RGVVWEE+II LP  
Sbjct: 262  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDAIRGVVWEETIIMLPDK 321

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP GG G+YLVVDE  
Sbjct: 322  VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGGEGIYLVVDENG 381

Query: 274  QFREDNF----VKLQDTFLKQ-KIGGRRENGKASGRMAKGGSGSGG-SDIFKIVKMIMER 327
             FRE NF      ++D   K       R+ GK   +  +  +G    SDI KIVKMIM++
Sbjct: 382  VFREKNFNSAIAAIEDNKSKDANDPNARQTGKGKNKKPRKDTGPDAKSDITKIVKMIMKK 441

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             F PVIVF+FS+RECE  A+ +S ++FN + E+  V+ +F NA+  L+EED+NLP I+ +
Sbjct: 442  AFHPVIVFNFSKRECENLALKVSSMNFNHETEQQLVDDIFHNAIMSLSEEDQNLPQIQHL 501

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            +PLLK+GI VHH GLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVF+ V K+
Sbjct: 502  IPLLKKGIGVHHGGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFSQVTKF 561

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG   R + S EYIQM+GRAGRRG DDRGI I+M+ EQ+E    K +V G+   L S F 
Sbjct: 562  DGVKERPLTSSEYIQMAGRAGRRGLDDRGIVIMMIGEQLEPEVAKGIVAGQQDRLNSAFH 621

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNL  R E   + E++++  F+QFQ    +P + KKV  L++E   +    E  
Sbjct: 622  LGYNMILNL-QRIE-TVSPEYMLERCFYQFQNAAGVPMLEKKVRDLQQEKDGMVIPDEGT 679

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE-GGTDWGWGVVVNVVKKP 626
            + +YH ++L I + +K + + I  P   L ++  GRL++++   G D+ WG +VN  K+ 
Sbjct: 680  IKDYHNVRLQIEEYKKDMEAVIQHPNYCLEFMQPGRLVRIKTPDGLDFDWGAIVNFTKRK 739

Query: 627  SAGV----------------------------GTLPSRGGGY----------------IV 642
             A                              G +P +G                   I+
Sbjct: 740  DAKFGEPEHSPQESVMIDVALFVSHNTDEIVPGVVPKKGHMTEGVTPQGPSEEEGKIEII 799

Query: 643  PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
            P  L  +  +S++R+ +P D+   + + +I   + E+ +RFP GLP L+P++ M I+D  
Sbjct: 800  PCLLTCLVGISQLRVFMPKDILNREGKNAIGKVLTEVHNRFPDGLPILDPIETMGIKDES 859

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
               L+ +IE LE +L ++PL++S    ++   ++ K E++++I++ K  +  +      D
Sbjct: 860  FKKLMRKIEVLESRLLSNPLHQSPHLPELWDQYKAKVELSNQIKEAKKAINKAHSIAQLD 919

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAA 819
            ELK+R RVL++LG I+   VVQ+K R AC I +  G EL++ EL+FNG FNDL     AA
Sbjct: 920  ELKSRMRVLRRLGFINDAEVVQMKARVACEISSTEGHELVLAELLFNGFFNDLTPDVCAA 979

Query: 820  LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
            + SCF+  D+  E   L+ +L K ++Q+   A+ IA I  E KL++  DE V ++++  L
Sbjct: 980  ILSCFV-FDEKMEAEPLKEDLDKLVRQVHAQAKTIARISRESKLDMP-DEKVVASLKWQL 1037

Query: 880  MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            MD +  W+KG  F E+ +M   +EGS++R  RRL+E L Q+  A + +G   L+KKF  A
Sbjct: 1038 MDTVLAWAKGRPFIEICKMNSAYEGSLVRIIRRLEELLRQMAEAGKVMGSETLQKKFDTA 1097

Query: 940  SESLRRGIMFSNSLYL 955
               + R ++ + SLYL
Sbjct: 1098 LSLIARDVVSAASLYL 1113


>gi|213405633|ref|XP_002173588.1| ATP-dependent RNA helicase DOB1 [Schizosaccharomyces japonicus
            yFS275]
 gi|212001635|gb|EEB07295.1| ATP-dependent RNA helicase DOB1 [Schizosaccharomyces japonicus
            yFS275]
          Length = 1002

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/958 (43%), Positives = 619/958 (64%), Gaps = 57/958 (5%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            +  +HEV++P+ Y     E   G+  +P      A++Y F LDPFQ  S+AC+ER ES++
Sbjct: 64   KQVLHEVSLPADYDYKPIEEHVGS-TSP------ARSYEFSLDPFQAASIACVERKESII 116

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            VSAHTSAGKT VAEYAIA A ++ +RV+YTSP+K+LSNQKYRE   EF DVGLMTGDVTL
Sbjct: 117  VSAHTSAGKTVVAEYAIAQALKNGERVVYTSPIKSLSNQKYREFLAEFGDVGLMTGDVTL 176

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +PNA CLVMTTEILR MLY+ SE+ +EV+WVIFDE+HYM+D++RGVVWEE+II LP A++
Sbjct: 177  NPNAGCLVMTTEILRSMLYKSSELTREVSWVIFDEVHYMRDKDRGVVWEETIILLPDAVR 236

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             +FLSAT+ NA +FA+WIC +H QPCHVVYT +RPTPLQH++FP G +G+Y++VDE  + 
Sbjct: 237  YIFLSATLPNAKEFADWICKIHNQPCHVVYTSYRPTPLQHFLFPRGANGIYMIVDEHGKL 296

Query: 276  REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
             E NF K      +Q     R+  K +  +          ++F++VKMI    + P+I+F
Sbjct: 297  MEGNFQKAMSILNEQDETSSRKKQKQNKSVP---------ELFRLVKMITANDYDPLIIF 347

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
             FS++ECE  A+S+S L+    ++K+ V+QVF +A++ L+E DR +P I  MLPLL+RGI
Sbjct: 348  CFSKKECEAGAVSISSLEVIDDKKKELVDQVFNSAMNQLSETDRCIPQITNMLPLLRRGI 407

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HHSG+LP+++E+VE+LFQEGL+  LFATETF++GLNMPA+TV+FT ++K+ G+S R+I
Sbjct: 408  GIHHSGMLPILREVVEILFQEGLITILFATETFSIGLNMPARTVLFTEMQKFSGESFRWI 467

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             S EY QMSGRAGRRG D+RG+ I+M ++  ++ T K +  G PA L S FR+SY  ILN
Sbjct: 468  NSSEYTQMSGRAGRRGLDERGLSIVMANKNFDLATAKAIFTGPPAALNSAFRISYNMILN 527

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            L+ R EG  T ++++K+SF+Q Q E  LP++  + S+++ +  S+    E +V E++ LK
Sbjct: 528  LL-RIEG-ITPDYILKHSFYQHQNEAKLPELNNECSRMKLDMESIVIPHEQDVQEFYDLK 585

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT--- 632
            L +   E  +   +  PE  L +L  GRLI+VR     + WG++VN  K  +A +     
Sbjct: 586  LQLKTYEDSIRKIMAHPEFCLPFLQPGRLIQVRLKDQVFPWGILVNFHKAENASLHLQIR 645

Query: 633  ---------------------------------LPSRGGGYIVPVQLPLISTLSKIRLSV 659
                                             LP      +V V L  + ++S +R+S+
Sbjct: 646  KSNPSDFYVLDVLLPVDKNTFKTNKIASSLMPGLPENATYEVVAVSLSSMHSISSLRVSL 705

Query: 660  PPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA 719
            P  L   + +++    VQE+  RFP G+P L+P++ M+I+   +  ++++I+ LE K+  
Sbjct: 706  PSSLITPEQKKTTYHIVQEISKRFPDGVPCLDPIEHMRIDSDSLRSVIHKIQILEPKVLN 765

Query: 720  HPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA 778
             P    ++ +     + RK ++  + + LK+ +  ++      ELK+R RVL++LG+I+ 
Sbjct: 766  SPYYTDEEFQEHYDEYCRKLQLRDQWKALKATISKTESVITLSELKSRRRVLRRLGYINE 825

Query: 779  DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ-INLR 837
            DGV+ +KGR AC I TGDEL++TE++F+G  N L   Q AAL SC +  + SS    N+ 
Sbjct: 826  DGVIDIKGRVACEISTGDELVLTEMIFSGLLNQLPIDQFAALLSCLVFQESSSTSATNVD 885

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
              L+KP Q+L + A  IA +  E KLE+  +EYV S  +P LM  +  W  GA+F E+  
Sbjct: 886  SRLSKPYQELLKLAEWIATVSRESKLEITEEEYV-SHFKPDLMSAVIEWMNGASFTEICG 944

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            M  I+EGSI+RS RRL+E L QL++AAQ +G   L      A++++RR ++FS SLYL
Sbjct: 945  MVHIYEGSIVRSFRRLEELLRQLQSAAQVLGNSELASLSERAADTMRRDVIFSASLYL 1002


>gi|46109548|ref|XP_381832.1| hypothetical protein FG01656.1 [Gibberella zeae PH-1]
          Length = 1094

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/946 (46%), Positives = 610/946 (64%), Gaps = 64/946 (6%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T++F+LDPFQ +SVA +ER ES+LVSAHTSAGKT VAEYA+A   +  QRVIYTSP+K
Sbjct: 153  ARTWNFKLDPFQSLSVASIEREESILVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSPIK 212

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+FD
Sbjct: 213  ALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFD 272

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            EIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTDFR
Sbjct: 273  EIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFR 332

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----GRRENGKASGR 304
            PTPLQ+Y FP GGSG  L+VDEK  F E NF K+     ++K         R+ GK   +
Sbjct: 333  PTPLQNYFFPAGGSGARLIVDEKSNFNEQNFNKVMQEVEEKKGADPNDPNARQKGKGKNK 392

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                G    GSDI KI++M +++KF PVIVF+FS+RECE  AM++S L FN   EK  V 
Sbjct: 393  KTNKGGADNGSDIAKIIRMTIKKKFNPVIVFNFSKRECENMAMNISSLSFNDDSEKAMVR 452

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            +VF NA++ L+E+DR LP I  +LPLL+RGI VHHSGLLP++KE +E+LFQE L+K LFA
Sbjct: 453  KVFHNAIESLSEQDRELPQIINLLPLLERGIGVHHSGLLPILKETIEILFQESLIKVLFA 512

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETF++GLNMPAKTVVFT V KWDG   R + S EYIQM+GRAGRRG D RGI I+M+D+
Sbjct: 513  TETFSIGLNMPAKTVVFTQVTKWDGVKRRPLTSSEYIQMAGRAGRRGLDARGIVIMMIDD 572

Query: 485  QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            ++E +T K++V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ   ++P
Sbjct: 573  KLEPDTAKEIVTGHQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAASVP 630

Query: 545  DIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRL 604
             + K++  L++E  S   + E+ V +Y++++  ++   + + + I  P   + YL  GRL
Sbjct: 631  SLEKELMSLQQERDSTSIADESTVKDYYQIRQQLSAYTRDMRTVIQHPNYSISYLQPGRL 690

Query: 605  IKVRE----------GGTDWGWGVVVNVVKKPSAGVGT--------------LP-SRGGG 639
            +++             GTD+GWGV+VN   + +  +                LP SR   
Sbjct: 691  VQIYNPKDKNESIAGNGTDFGWGVIVNQTPRRAPKLNEPEYIPQEAHVIDVLLPISRSSA 750

Query: 640  --------------------------YIVPVQLPLISTLSKIRLSVPPD-LRPLDARQSI 672
                                       +VP  L  I  +S+IRL +P + L+    + ++
Sbjct: 751  DFHPGHPAEEMPPGIKPCNDDDDIKFAVVPCLLTCIKAISQIRLFLPKEGLKSDSDKDTL 810

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI- 731
              ++ E++ RFP GLP L+P+++M+I D     L+ +IE LE +L A+PL+ S     + 
Sbjct: 811  TKSLMEVKRRFPDGLPVLDPIENMEITDDSFKKLLRKIEVLESRLLANPLHLSPLLPSLW 870

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
              +  K ++  ++++ K  +  +      DELK+R RVL++LG I+   VVQLK R AC 
Sbjct: 871  DQYHAKVKLTEKVKETKKSIAKAYSIAQMDELKSRKRVLRRLGFINDAEVVQLKARVACE 930

Query: 792  IDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            + +  G ELL++EL+F+  FN+      AA+ SCFI  D+  E   L+ EL KP +++Q 
Sbjct: 931  VSSTEGHELLLSELLFDRFFNEQTPEMCAAVMSCFI-FDEKVEAPALKEELQKPYREIQA 989

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRS 909
             AR IA++  ECKL+VN +EY +  ++  LM+ +Y W++G  F E+ +MT+++EGS+IR 
Sbjct: 990  KARIIAKVSQECKLDVNEEEYAQK-LKWQLMETVYTWAQGRPFVEICKMTNVYEGSLIRL 1048

Query: 910  ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             RRL+E L Q+  AA+ +G  +L KKF  +   +RR I+ + SLYL
Sbjct: 1049 FRRLEELLRQMAQAAKVMGNEDLTKKFEESLSKIRRDIVAAQSLYL 1094


>gi|403340622|gb|EJY69602.1| Superfamily II RNA helicase [Oxytricha trifallax]
          Length = 1110

 Score =  817 bits (2111), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 424/996 (42%), Positives = 625/996 (62%), Gaps = 88/996 (8%)

Query: 25   EESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYN--GEMAKTYSFELDPFQR 82
            EE  + +R    +C+HE   P GY              P Y    + AK Y F LD FQ 
Sbjct: 138  EEDYEVERMEWPNCIHEYVQPKGYD------------RPPYKRPAKRAKEYKFTLDKFQE 185

Query: 83   VSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQE 142
             +V C+ERNESVLV+AHTSAGKTAVAEYAIA+A   KQRVIYTSP+KALSNQKYREL +E
Sbjct: 186  RAVECIERNESVLVAAHTSAGKTAVAEYAIALALNSKQRVIYTSPIKALSNQKYRELQEE 245

Query: 143  FKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVV 202
            F DVGLMTGDVT++ +ASC+VMTTEILR MLY GSE+ +E+AWVIFDE+HYM+D+ERGVV
Sbjct: 246  FVDVGLMTGDVTINESASCIVMTTEILRSMLYNGSEITREMAWVIFDEVHYMRDKERGVV 305

Query: 203  WEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGG 262
            WEE++I LP  +K VFLSAT+ NA +FAEWI  + KQPC VVYTD+RPTPLQH+++P+GG
Sbjct: 306  WEETMILLPTTVKYVFLSATIPNAREFAEWIVKIKKQPCSVVYTDYRPTPLQHFIYPMGG 365

Query: 263  SGLYLVVDEKEQFREDNFVKL-----QDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDI 317
             G+Y VVD+  QF+E NF K       D  L + +  ++   K + +       +  S++
Sbjct: 366  EGIYCVVDQNGQFKEQNFTKAISVLENDMNLDKILDDKKNRNKTTQQ-----KTTQNSEM 420

Query: 318  FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             KI+ +I+++   P IVFSFS+R+CE +AM++   DFN  EEKD ++ +F NA+  L EE
Sbjct: 421  KKIITLIVDKGLDPCIVFSFSKRDCEAYAMALKGCDFNKDEEKDQIKLIFNNAMSSLAEE 480

Query: 378  DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
            D  LP I+ MLPLL+RGI +HH GLLP++KE++ELLFQEGL+K LF TETF+MG+NMPA+
Sbjct: 481  DAQLPTIQSMLPLLQRGIGIHHGGLLPIVKEVIELLFQEGLLKILFTTETFSMGINMPAR 540

Query: 438  TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLG 497
            TVVFT+++K+DGD +R+I  GE+IQMSGRAGRRG DDRG+ I++ ++++E +  K+++ G
Sbjct: 541  TVVFTSIEKFDGDEYRWITGGEFIQMSGRAGRRGLDDRGVTIMIANKKLEPDVAKNILKG 600

Query: 498  KPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEA 557
            +  PL S F L Y  +LN+M R E   + E +I  SFHQFQ E+A P +  K+++L  E 
Sbjct: 601  QSDPLYSAFHLGYNMLLNMM-RLED-ISPEDIILKSFHQFQNERACPQMKAKLTELIAEY 658

Query: 558  ASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWG 617
             S++   E +  +  K      Q+++K+ + +  PE ++ ++  GRL+K+     DWGWG
Sbjct: 659  KSINIPLEDKYEKKTKYISQRQQIDQKINTIVCEPENIMPFMVPGRLVKICSEQQDWGWG 718

Query: 618  VVVNVVK--------------KPSAGVGTLPSRGGGYIVPVQLPL--------------- 648
            +VV+  K              K S  +  L      +I+ V L +               
Sbjct: 719  IVVSWTKQKINPKKFMMAAKSKTSQALDILSQNENHFILDVYLYVKNRLTNDNLLQPGDA 778

Query: 649  ------------------ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG--LP 688
                              I+ +S I++++P +L+  D  + +     ++  RF  G  +P
Sbjct: 779  KAKDGRLGVCPVIMHHTNIAAISTIQVNLPHNLKDQDNAKQVENMFFQIMQRFEFGAKIP 838

Query: 689  KLNPVKDMKIEDPEVVDLV-------NQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVN 741
             L+P+KDM+IE+ E+           N+++++  K      N+S  +     F RK E+ 
Sbjct: 839  LLDPIKDMEIENSELKKFFKAKTLIDNELQKINEKYLQ---NQSVSDQHEILFARKKEIK 895

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            H + +L+  ++ +     +++L N  RV+++L   +      LKG+ AC I   DELLVT
Sbjct: 896  HTMTELEESVKKASEMIMKNDLVNMKRVMRRLEMCEKTDQPTLKGKVACSISASDELLVT 955

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSE-QINLRMELAKPLQQLQESARKIAEIQNE 860
            EL+F+G F +++ +Q+AAL SC +  D   E ++    +  +P Q LQ++A KIA I  E
Sbjct: 956  ELLFSGMFQNMEPNQIAALCSCLVFTDVKGEVKMPKEEKFTQPFQLLQQAAEKIATIMVE 1015

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT-DIFEGSIIRSARRLDEFLNQ 919
             K+ ++ +EYV+   RP +M++ Y W +GA F E+ ++  D++EG+IIR+ RRLDE L+Q
Sbjct: 1016 SKIPLDKEEYVQK-FRPDIMEITYKWCQGAKFKEICEIAQDVYEGTIIRAFRRLDELLSQ 1074

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  + + +G +  ++KF  A + L+RGI+F+ SLYL
Sbjct: 1075 MTESCKIIGNMEQKRKFEEAQKGLKRGIVFAASLYL 1110


>gi|429850926|gb|ELA26154.1| ATP-dependent RNA helicase dob1 [Colletotrichum gloeosporioides Nara
            gc5]
          Length = 1083

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/956 (45%), Positives = 613/956 (64%), Gaps = 72/956 (7%)

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
             E A+ Y+F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTS
Sbjct: 133  AEPARKYNFKLDPFQALSVASIEREESVLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTS 192

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV
Sbjct: 193  PIKALSNQKYRDFEALFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWV 252

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            +FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYT
Sbjct: 253  VFDEIHYMRDKTRGVVWEETIILLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYT 312

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS--GR 304
            DFRPTPLQ+Y FP GG+G++LVVDEK  FRE NF K     ++Q  G    N  A+  G+
Sbjct: 313  DFRPTPLQNYFFPSGGNGIFLVVDEKGVFREGNFQKTM-ALVEQGKGQDPSNANANWKGK 371

Query: 305  MAKGGSGSGG------SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
             AK  +  GG      SDI KIV+MIM++ F PVI+F+FS++E E  A+++S   FN   
Sbjct: 372  GAKKNTQKGGQAADMKSDISKIVRMIMQKSFHPVIIFNFSKKEVENLALNISHFQFNNDS 431

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            E+  V+ VF NA+  L+E DR LP I+ +LPLL++GI VHHSGLLP++KE +E+LFQE L
Sbjct: 432  EQAMVKTVFNNAIQSLSEADRELPQIQNLLPLLQKGIGVHHSGLLPILKETIEILFQESL 491

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            +K L ATETF++GLNMPAKTVVFT V KWDG   R +   EYIQMSGRAGRRG D RGI 
Sbjct: 492  IKVLVATETFSIGLNMPAKTVVFTQVTKWDGVKRRPLTPSEYIQMSGRAGRRGLDSRGIV 551

Query: 479  IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            I+M+D++ME +T + +V+G+   L S F L Y  ILNL+ R E   + E +++  FHQFQ
Sbjct: 552  IMMIDDKMEPDTARAIVVGEQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQ 609

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
               ++P + + +  L++E  ++  + EA V EY+ L+  + Q    + + I  P+  + +
Sbjct: 610  TGASVPALERDLMALQQERDAMSIADEATVKEYYNLRNQLEQYTSDMRAVIQHPDYCIDF 669

Query: 599  LGSGRLIKVRE--------GGTDWGWGVVVNVVK-------------------------- 624
            +  GRL+++ +        GGTD+GWGVV ++ K                          
Sbjct: 670  MQPGRLVRIHDPKKTNTTVGGTDYGWGVVCDLAKRKANKPGEPEYPPQETYFIDVMMFVD 729

Query: 625  ---KPSAGVGTLPSRGGGY-------------------IVPVQLPLISTLSKIRLSVPPD 662
               KP+  V   PS G                      I+P  L  I  +S+IR+ +P +
Sbjct: 730  QKSKPAPQVNERPSSGDMAPGMIPCAKPDEPGEGARFEIIPCLLTCIKNISQIRIFMPKE 789

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
             +     ++   A++E+  RFP G+P L+P+++M I D     L+ +IE LE +L  +PL
Sbjct: 790  PKSQAGIEAASNALREVCRRFPDGVPSLDPIENMGITDDSFRSLMRKIEMLEARLITNPL 849

Query: 723  NKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            + S    ++   ++ K ++  +I+  K ++         DELK R RVL++LG ++ + V
Sbjct: 850  HGSPLLPELYLQYRAKEKLGEQIKAKKKEIARLHSIAQMDELKGRKRVLRRLGFLNENEV 909

Query: 782  VQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME 839
            V+LK R AC I +  G EL++ EL+F+  FN+L    +A++ SCF+ +D+  E  +LR E
Sbjct: 910  VELKARVACEISSTEGHELVLAELLFDRFFNELSPEMIASVLSCFV-LDEKLETASLREE 968

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            LAKP +++Q  A+++A++  E KLE+N DEY+ +  +  LM+ +Y W++G  FA++ +MT
Sbjct: 969  LAKPYREVQAKAKQVAKVSRESKLELNEDEYL-AGFKWQLMETVYSWAQGKPFADICKMT 1027

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + +EGS+IR  RRL+E + Q+   A+ +G   L +KF  +   +RR I+ + SLYL
Sbjct: 1028 NAYEGSLIRLFRRLEELMRQMGQGAKVMGSEELCQKFEDSLAKVRRDIVAAQSLYL 1083


>gi|167377514|ref|XP_001734425.1| helicase [Entamoeba dispar SAW760]
 gi|165904038|gb|EDR29400.1| helicase, putative [Entamoeba dispar SAW760]
          Length = 977

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/966 (44%), Positives = 618/966 (63%), Gaps = 41/966 (4%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGE 68
           KR+   ED +    P  EST       + C HEVA+P G   T+         NP Y  E
Sbjct: 34  KRRKIIEDKYKDLLPRPESTPILEAQYQGCTHEVAIPDGQTATEQTL------NPQYPRE 87

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            AKTY F LD FQR+S++C+ +NESVLVSAHTSAGKTAVAEYAIA A ++ QRVIYTSP+
Sbjct: 88  PAKTYPFTLDDFQRLSISCIGQNESVLVSAHTSAGKTAVAEYAIASALKNNQRVIYTSPI 147

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR+L ++F DVGL+TGD+T++  ASCLVMTTEILR MLYRG++V++EVAWVIF
Sbjct: 148 KALSNQKYRDLQEQFTDVGLITGDITINEEASCLVMTTEILRNMLYRGNDVMREVAWVIF 207

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HYM+D+ERGVVWEESII LP  +  VFLSAT+ NA +FA WI ++HKQ CHVVYTD+
Sbjct: 208 DEVHYMRDKERGVVWEESIILLPDTVHYVFLSATIPNAFEFASWISNIHKQVCHVVYTDY 267

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RPTPL HY+FP GG+G+YLVVD++ +FRE+ F K   T     +G +    + + +    
Sbjct: 268 RPTPLCHYLFPAGGNGIYLVVDKECKFREEGFNKALTTLGLDAVGIKTTRKQMNNK---- 323

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
                  D+ KI+ MIM+    PVI+FSF+R+E E  A + +++D  + +EK  + ++F 
Sbjct: 324 ------PDVIKIITMIMKNNLAPVIIFSFNRKELEIMAKTCNRMDLTSDDEKTIIGKIFN 377

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
           NA+ CLN EDR L  I  +LPLL +G+ +HHSGLLP++KE VE+LFQEGL+K LFATETF
Sbjct: 378 NAIQCLNAEDRKLEQITELLPLLLKGVGMHHSGLLPIMKETVEILFQEGLIKCLFATETF 437

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
           AMGLNMPA+TVVFT VKK+DG   RY+  GEYIQMSGRAGRRGKD++G  I+MVD+++E 
Sbjct: 438 AMGLNMPARTVVFTKVKKYDGKETRYLRPGEYIQMSGRAGRRGKDEQGTVILMVDQKIEP 497

Query: 489 NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             LK+M+ GK  PL S+F L Y  +LNLM         E +I  SF QFQ    LP++ K
Sbjct: 498 TVLKNMIFGKADPLTSSFYLGYNMVLNLMKLEAAD--PEGLICKSFRQFQTNNKLPELQK 555

Query: 549 KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
           K+ +LEE+  +   + E  +   + LKL I Q ++ +   I + + +L +L  GRL+ + 
Sbjct: 556 KLKELEEKEKTYIFTEENIIKPIYHLKLAIEQHKENIHENIYQEKVILPFLVDGRLVHII 615

Query: 609 EGGT--DWGWGVVVNVVKKPSAGVGTLPS--------------RGG-GYIVPVQLPLIST 651
           +  T  D+GW  ++   K+    +  + S              +GG   I    +  IS 
Sbjct: 616 DKNTLFDFGWVPIIADKKRKVGSISVIVSLKKGALERTPEELGKGGKAGITTFNIECISE 675

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQE-LESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQ 709
           +S +RL +P +++  D   + L  +   ++ ++P   LP L+P+ DMKI++  ++  + +
Sbjct: 676 ISTLRLGLPDNVK--DNLDTFLFKINNAIKKKYPDFKLPVLDPINDMKIKEENIIKSIKK 733

Query: 710 IEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
           ++ELE +      N +  + +   F  +  +  EI  L++ +  S+    +DEL+   RV
Sbjct: 734 VKELEERWKEIEWNDNI-KKEFDKFVERENIREEINVLRNTVIQSKDVILKDELRGMRRV 792

Query: 770 LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
           LK+LG++  D ++Q KGR A  +  G+E+L+TEL+F+G F+ L+  Q  AL  CF+  +K
Sbjct: 793 LKRLGYVSEDDIIQTKGRVAAELSAGNEILLTELLFSGVFSSLNSKQATALLGCFVLDEK 852

Query: 830 SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
             E I    +L +    +  +AR+I  I  +C+L +NVD+Y+E   RP ++ ++  W  G
Sbjct: 853 PKESIQPPKDLEESFALIITNARRIGNIMADCRLNINVDKYIEQ-FRPTMLPIVESWCDG 911

Query: 890 ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            TFA++I  +++FEGSIIR  RRL+E L Q+  A++ +G  +L KKF      ++R I+F
Sbjct: 912 MTFAQLIHGSELFEGSIIRGMRRLEELLVQMTDASKFMGNPDLAKKFEEGITLIKRDIIF 971

Query: 950 SNSLYL 955
           + SLY+
Sbjct: 972 AASLYI 977


>gi|322696407|gb|EFY88200.1| ATP-dependent RNA helicase DOB1 [Metarhizium acridum CQMa 102]
          Length = 1098

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/951 (45%), Positives = 606/951 (63%), Gaps = 68/951 (7%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+T++F+LDPFQ +SVA +ER+ESVLVSAHTSAGKT VAEYA+A   +  QRVIYTSP
Sbjct: 153  EPARTWNFKLDPFQSLSVASIERDESVLVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSP 212

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGDVT++  ASCLVMTTEILR MLYRGSE+++EVAWVI
Sbjct: 213  IKALSNQKYRDFEAIFGDVGLMTGDVTINSTASCLVMTTEILRSMLYRGSEIMREVAWVI 272

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTD
Sbjct: 273  FDEIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTD 332

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            FRPTPLQ+Y FP GG G  +VVDEK  F E NF  L    ++ K G    +  A  R   
Sbjct: 333  FRPTPLQNYFFPSGGKGARIVVDEKGNFNEQNF-NLVMKEVEDKKGADSNDINAKQRGKG 391

Query: 308  GGSGSG------GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
                        GSDI KI++M +++KF PVIVF+FS+ ECE  A+ +S L FN   EK 
Sbjct: 392  KNKKINKGGVDEGSDIHKIIRMTIKKKFNPVIVFNFSKAECENMALRISNLSFNDDSEKA 451

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
             V++VF +A++ L E+DR LP I+ +LPLL+RG+ VHHSGLLP++KE +E+LFQE L+K 
Sbjct: 452  MVKKVFHSAIESLTEQDRELPQIQHLLPLLERGVGVHHSGLLPILKETIEILFQESLIKV 511

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETF++GLNMPAKTVVFT V KWDG   R + S EYIQM+GRAGRRG D RGI I+M
Sbjct: 512  LFATETFSIGLNMPAKTVVFTQVTKWDGVKRRPLTSSEYIQMAGRAGRRGLDARGIVIMM 571

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            +D+++E +T KD+V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ   
Sbjct: 572  IDDKLEPDTAKDIVTGHQDKLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAA 629

Query: 542  ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            ++P + K++  L++E   L    EA + +Y++++  +    K + + I  P   L +L  
Sbjct: 630  SVPSLEKELMSLQQERDGLSIPDEATIKDYYQIRQQLNTYTKDMRAVIQHPNHCLDFLQP 689

Query: 602  GRLIKVRE---------GGTDWGWGVVVNVVKK--------------------------- 625
            GRL+++           GG D+GWGV+VN   +                           
Sbjct: 690  GRLVQIYNPKEAHDNVTGGLDFGWGVIVNHYPRRAPRLGEPEWEPQESHIIDVMLPISAS 749

Query: 626  -----PSAGVGTLPS--RGGG----------YIVPVQLPLISTLSKIRLSVPPDLRPLDA 668
                 P    G +P   R  G           ++P  L  I  +S+IR+ +P D    DA
Sbjct: 750  SADITPGQPTGDMPPGLRPAGADTADTATINVVIPCLLTCIKAISQIRIFMPKDGLKADA 809

Query: 669  -RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
             +     ++ E++ RF  G+P L+P+++M+I D     L+ +IE LE +L A+PL+ S  
Sbjct: 810  DKDQARKSLAEVKRRFTDGIPILDPLENMEIVDDSFKKLLRKIEVLESRLLANPLHMSPM 869

Query: 728  ENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               +   + +K ++  ++++ K  +  +      DELK+R RVL++LG I+   VVQLK 
Sbjct: 870  LPSLWDQYSKKVQLIEKVKEKKKAISKAHSIAQMDELKSRKRVLRRLGFINDSEVVQLKA 929

Query: 787  RAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            R AC I +  G ELL++EL+F+  FN+L     AA+ SCFI  D+  E   L+ +L KP 
Sbjct: 930  RVACEISSTEGHELLLSELLFDRFFNELSPETCAAVLSCFI-FDEKVEAQALKEDLQKPY 988

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +++Q  AR IA++  ECKL+VN +EYV ++++  LM+ +Y W++G  F E+ +MT+I+EG
Sbjct: 989  REIQAKARIIAKVSQECKLDVNEEEYV-TSLKWQLMETVYTWAQGRPFIEICKMTNIYEG 1047

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            S+IR  RRL+E L Q+  AA+ +G  +L KKF  + + +RR I+ + SLYL
Sbjct: 1048 SLIRLFRRLEELLRQMGQAAKVMGNEDLVKKFEESLQKIRRDIVAAQSLYL 1098


>gi|149235740|ref|XP_001523748.1| ATP-dependent RNA helicase DOB1 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452727|gb|EDK46983.1| ATP-dependent RNA helicase DOB1 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 970

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/944 (47%), Positives = 617/944 (65%), Gaps = 72/944 (7%)

Query: 21  GTPEEESTKKQRNLTRSCVHEVAVPSGYA---LTKDEAIHGTFANPVYNGEMAKTYSFEL 77
           G  + E    +  L     H+VAVP  Y    +++ +  H            AKTY F L
Sbjct: 90  GLQQTEEPNAKLKLKHQVRHQVAVPPDYPYIPISEHKRKHE-----------AKTYPFTL 138

Query: 78  DPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYR 137
           DPFQ  +++C++R+ESVLVSAHTSAGKT VAEYAIA + R+KQRVIYTSP+KALSNQKYR
Sbjct: 139 DPFQDTAISCIDRSESVLVSAHTSAGKTVVAEYAIAQSLREKQRVIYTSPIKALSNQKYR 198

Query: 138 ELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDR 197
           EL  EF DVGLMTGDVT++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+
Sbjct: 199 ELQAEFGDVGLMTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDK 258

Query: 198 ERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYV 257
            RGVVWEE++I LP  +  VFLSAT+ NA +FAEWI  +H QPCHVVYTDFRPTPLQHY+
Sbjct: 259 SRGVVWEETMILLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTDFRPTPLQHYL 318

Query: 258 FPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS--GRMAKG----GSG 311
           FP GG G++LVVDEK  FRE+NF K   T     IG  + +  AS   R  KG    G  
Sbjct: 319 FPSGGDGIHLVVDEKGTFREENFQKAMTT-----IGDSQGDDPASTQSRGKKGQTFKGKK 373

Query: 312 SGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV 371
            G +D++KIVKMI ++K+ PVIVFSFS+R+CE +A+ MSKLDFN  EE+  + ++++NA+
Sbjct: 374 DGKTDLYKIVKMIYQKKYNPVIVFSFSKRDCESYALKMSKLDFNNDEERAALTKIYENAI 433

Query: 372 DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
             L+E DR LP I+ +LPLLKRGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++G
Sbjct: 434 SILSESDRELPQIKNILPLLKRGIGIHHSGLLPILKEVIEILFQEGLLKVLFATETFSIG 493

Query: 432 LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTL 491
           LNMPAKTVVFT+V+KWDG + R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    
Sbjct: 494 LNMPAKTVVFTSVRKWDGTAFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVA 553

Query: 492 KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS 551
           K MV G+   L S F L Y  ILNL+ R EG  + E +++NSF QFQ    +P++ KK +
Sbjct: 554 KGMVKGQADRLDSAFHLGYNMILNLL-RVEG-ISPEFMMQNSFLQFQKSAKVPELEKKKA 611

Query: 552 KLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGG 611
            LE EA+ +    E ++ +Y++L+  I   E+++   +T PE +L YL  GRL+K+    
Sbjct: 612 ALEAEASGIQVDDEPKMKQYYELQRQITNYEEEIRKIVTEPENLLPYLQDGRLLKI---- 667

Query: 612 TDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQS 671
            D  W  V +   K S  V    S        V LP I  +S +R+             +
Sbjct: 668 -DNEWCCVKSY--KGSLKVAMADSSEK----IVLLPFIQAVSSVRVK---------NANA 711

Query: 672 ILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI 731
           I   VQ+L       +P L       I+D + +++  ++E L  KL    L   +  N +
Sbjct: 712 IKAVVQKLGE-----VPLL-------IKDEKALEIQKKVEFLSSKLDKVVL---ESPNYL 756

Query: 732 RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
             + +K E+  + +++ ++++    Q + +EL++R  VL++LG +D D VV LKGR A  
Sbjct: 757 -AYYKKRELLSQSEKVGAELQQLTFQ-YTEELRSRMSVLRRLGLVD-DAVVGLKGRCALE 813

Query: 792 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
           I +G+ELL+TEL+F+G F DL+  QV AL S F+  +KS E   L   L     +++ +A
Sbjct: 814 ISSGNELLLTELIFDGFFKDLNPIQVCALLSPFVFDEKSKELPRLNGVLKDKFGKIETAA 873

Query: 852 RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
              A+IQ       NV + V+  + P L++V Y W+ G++FA++ ++T IFEGS+IR+ R
Sbjct: 874 ESFAQIQK------NVTD-VKEVLSPALIEVTYNWANGSSFAQLCKLTPIFEGSLIRAFR 926

Query: 912 RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           RL+E + QL  +A+ +G+  LE+KF    + + R I+ + SLYL
Sbjct: 927 RLEELIRQLVQSAKVIGDSELEEKFEELRKLISRDIVSAGSLYL 970


>gi|389644602|ref|XP_003719933.1| FRQ-interacting RNA helicase [Magnaporthe oryzae 70-15]
 gi|351639702|gb|EHA47566.1| FRQ-interacting RNA helicase [Magnaporthe oryzae 70-15]
 gi|440473029|gb|ELQ41852.1| ATP-dependent RNA helicase DOB1 [Magnaporthe oryzae Y34]
 gi|440484809|gb|ELQ64829.1| ATP-dependent RNA helicase DOB1 [Magnaporthe oryzae P131]
          Length = 1102

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/993 (44%), Positives = 631/993 (63%), Gaps = 78/993 (7%)

Query: 21   GTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPF 80
            GT EE+S     N+     H+VA+P        + ++   +      E A+ Y+F+LDPF
Sbjct: 130  GTKEEDSLVLSHNIQ----HQVALPPDL-----DYVYVPLSEHKPPEEPARKYAFKLDPF 180

Query: 81   QRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELH 140
            Q +SVA +ER+ESVLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQK+R+  
Sbjct: 181  QSISVASIERDESVLVSAHTSAGKTVVAEYAIAHCLKRNQRVIYTSPIKALSNQKFRDFQ 240

Query: 141  QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG 200
             EF DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+ +EV WV+FDEIHYM+D  RG
Sbjct: 241  AEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEITREVGWVVFDEIHYMRDATRG 300

Query: 201  VVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPV 260
            VVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+YVFP 
Sbjct: 301  VVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYVFPA 360

Query: 261  GGSGLYLVVDEKEQFREDNFVKL----------QDTFLKQKIGGRRENGKASGRMAKGGS 310
            GG G+Y++VDEK  FRE  F++            D+  +QK  G+ +N KA     K   
Sbjct: 361  GGDGIYIMVDEKGVFREKKFMEAIGSIAGKNDDDDSMPRQK--GKGKNKKA----VKNTV 414

Query: 311  GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
                +DI KI+KMIM R + PVIVF+FS+RECE  A+ +S L+FN + E+  VE +F+NA
Sbjct: 415  PDSKADITKIIKMIMRRAYHPVIVFNFSKRECENLALKVSTLNFNHESEQKLVEDIFRNA 474

Query: 371  VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
            +  L+EED+ LP I+ +LPLLK+GI VHHSGLLP++KE +E+LFQE L+K LFATETF++
Sbjct: 475  IMSLSEEDQGLPQIQHLLPLLKKGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSI 534

Query: 431  GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT 490
            GLNMPAKTVVF+ VKK+DG   R +   EYIQMSGRAGRRG DDRGI I+M+D++++  T
Sbjct: 535  GLNMPAKTVVFSQVKKFDGVKERPLTPSEYIQMSGRAGRRGLDDRGIVIMMIDDKLDPET 594

Query: 491  LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
             K MV G+   L S F L Y  ILNL  R E   + +++++  F+QFQ   ++P + KK+
Sbjct: 595  AKGMVCGQQDRLNSAFHLGYNMILNL-QRIE-TVSPQYMLERCFYQFQNASSVPALEKKL 652

Query: 551  SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE- 609
             +L+++  ++    E+ V +YH ++  I   +K + + I  P   L ++  GRLI+++  
Sbjct: 653  IELQQQRDAMVIPDESTVKDYHTVRQQIEAYKKDMEAVIQHPNNCLEFMQPGRLIRIKTP 712

Query: 610  GGTDWGWGVVVNVVKK--------------------------------PSAGV------- 630
             G D+ WGVVVN + +                                P A V       
Sbjct: 713  DGVDFDWGVVVNFLPRKPVKFGEEEPPPQESYLMDVALFVSEDSISPPPHASVSKEGHIA 772

Query: 631  -GTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ 685
             G  PS     G   +VP  L  +  +S+IR+ +P D+  L   Q +   ++E++ RFP 
Sbjct: 773  DGVEPSGSVDHGRLEVVPCLLTCMVAISQIRIFMPKDMDHLGKSQ-VSHGLEEVQRRFPD 831

Query: 686  GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEI 744
            G+P L+P+++M I+D     L+ +IE LE +L ++PL+ S +  ++   ++ K E+  +I
Sbjct: 832  GVPILDPIENMGIKDDSFKKLMRKIEVLESRLLSNPLHGSPNLPELWDKYKIKTELTSQI 891

Query: 745  QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTE 802
            ++ K  +  S      DELK+R RVL++L  I+ + VVQ+K R AC I +  G EL+++E
Sbjct: 892  KETKRAINKSYSIAQLDELKSRMRVLRRLNFINENEVVQMKARVACEISSTEGHELVISE 951

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+FNG FN+L+    AA+ SCF+  D+  E   L+ +L K ++++   A+ IA I  E K
Sbjct: 952  LLFNGFFNELEPEVCAAILSCFV-FDEKMEGTPLKEDLDKLVREIHAQAKTIARISRESK 1010

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            L+V+ DE V   ++  L + +  W+KG  FAE+ +MT+ +EGS++R  RRL+E L Q+  
Sbjct: 1011 LDVS-DEQVVGNLKWQLTETVLAWAKGRPFAEICKMTNAYEGSLVRIMRRLEELLRQMAE 1069

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A + +G   L+KKF  A   + R ++ + SLYL
Sbjct: 1070 AGKVMGSEMLQKKFEKALSLISRDVVSAASLYL 1102


>gi|302661338|ref|XP_003022338.1| hypothetical protein TRV_03549 [Trichophyton verrucosum HKI 0517]
 gi|291186278|gb|EFE41720.1| hypothetical protein TRV_03549 [Trichophyton verrucosum HKI 0517]
          Length = 1018

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/916 (47%), Positives = 600/916 (65%), Gaps = 70/916 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P+GY        H     P      A+ + F LDPFQ+VS+A +ER ES
Sbjct: 118  LSHQVRHQVALPAGYDYIPISQ-HKPPEKP------ARVWPFTLDPFQQVSIASIEREES 170

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 171  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 230

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 231  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 290

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 291  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYLFPAGAEGIHLVVDEKG 350

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMA------------KGGSGSGGSDIFKIV 321
             FRE+NF K   +         R+    +  MA            KGG  +G SDI+KIV
Sbjct: 351  VFREENFQKAMSSI------ADRQGADPADAMAKRKGKGKDKKTNKGGDKNGPSDIYKIV 404

Query: 322  KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
            KMIM + + PVIVFSFS+RECE  A+ MSKL FN   EK+ V +VF +A++ L+EEDR+L
Sbjct: 405  KMIMMKNYHPVIVFSFSKRECEAFALQMSKLAFNDNSEKEMVSKVFNSAIEILSEEDRDL 464

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
            P I+ +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 465  PQIQHILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVF 524

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
            T+V+K+DG S R+I S E++QMSGRAGRRG DDRG+ I+MVDE+M+    KD+V G+   
Sbjct: 525  TSVRKFDGVSSRWITSSEFVQMSGRAGRRGLDDRGLVIMMVDEEMDPPVAKDIVRGEQDK 584

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++++LE    ++ 
Sbjct: 585  LNSAFHLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVSGLEKELAELESSRDAMT 642

Query: 562  ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
               E  + EY+ L+  I      + + IT P   + +L  GRLI ++    D+GW VVVN
Sbjct: 643  IEDEGTIREYYDLRQKIDTYNSDMRAVITHPNYCVSFLKPGRLIHIKYQDYDFGWSVVVN 702

Query: 622  V-VKKP------------------------------SAGVGTLP------SRGGGY---I 641
               +KP                              S GV  LP      ++G      +
Sbjct: 703  CQARKPPKNAPREEYEPRESYIVDVLLPVSEDSFLKSKGVQPLPPGVKPANKGEPSKLEV 762

Query: 642  VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
            VPV L  I ++S +++ +P +L+P ++R+++   + +++ RFP GL  L+P+++M I D 
Sbjct: 763  VPVLLNCIHSISMVKIKMPSNLKPEESRKAVKKQIMQIQQRFPDGLALLDPIENMNITDD 822

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
            E   L+ +IE LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      
Sbjct: 823  EFKRLLRKIEVLESRLISNPLHNSPRLPELYDQYAAKVELVKKIKETKKKITEAMSIIQM 882

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            DELK R RVL++   I+ D VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA 
Sbjct: 883  DELKCRKRVLRRFQFINEDEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAA 942

Query: 821  ASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
             S F+  + + +   +   ELAKPL+ +Q  AR IA++  E KL VN DEYV+S  R  L
Sbjct: 943  LSVFVFEENAKDTPAITNEELAKPLRDIQAQARIIAKVSQESKLPVNEDEYVKS-FRWEL 1001

Query: 880  MDVIYCWSKGATFAEV 895
            M+V++ W+KG +FA++
Sbjct: 1002 MEVMFEWAKGKSFADI 1017


>gi|302500204|ref|XP_003012096.1| hypothetical protein ARB_01604 [Arthroderma benhamiae CBS 112371]
 gi|291175652|gb|EFE31456.1| hypothetical protein ARB_01604 [Arthroderma benhamiae CBS 112371]
          Length = 1018

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/916 (47%), Positives = 600/916 (65%), Gaps = 70/916 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+    H+VA+P+GY        H     P      A+ + F LDPFQ+VS+A +ER ES
Sbjct: 118  LSHQVRHQVALPAGYDYIPISQ-HKPPEKP------ARVWPFTLDPFQQVSIASIEREES 170

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   ++ QRVIYTSP+KALSNQKYRE   EF DVGLMTGDV
Sbjct: 171  VLVSAHTSAGKTVVAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFAAEFGDVGLMTGDV 230

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 231  TINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIILLPDK 290

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEW+  +H QPCHVVYTDFRPTPLQHY+FP G  G++LVVDEK 
Sbjct: 291  VRYVFLSATIPNAMQFAEWVTKMHNQPCHVVYTDFRPTPLQHYLFPAGAEGIHLVVDEKG 350

Query: 274  QFREDNFVKLQDTFLKQKIGGRRENGKASGRMA------------KGGSGSGGSDIFKIV 321
             FRE+NF K   +         R+    +  MA            KGG  +G SDI+KIV
Sbjct: 351  VFREENFQKAMSSI------ADRQGADPADAMAKRKGKGKDKKTNKGGDKNGPSDIYKIV 404

Query: 322  KMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
            KMIM + + PVIVFSFS+RECE  A+ MSKL FN   EK+ V +VF +A++ L+EEDR+L
Sbjct: 405  KMIMMKNYHPVIVFSFSKRECEAFALQMSKLAFNDNSEKEMVSKVFNSAIEILSEEDRDL 464

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
            P I+ +LPLL+RGI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPAKTVVF
Sbjct: 465  PQIQHILPLLRRGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPAKTVVF 524

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
            T+V+K+DG S R+I S E++QMSGRAGRRG DDRG+ I+MVDE+M+    KD+V G+   
Sbjct: 525  TSVRKFDGVSSRWITSSEFVQMSGRAGRRGLDDRGLVIMMVDEEMDPPVAKDIVRGEQDK 584

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S F L Y  ILNL+ R EG  + E +++  F+QFQ   ++  + K++++LE    ++ 
Sbjct: 585  LNSAFHLGYNMILNLL-RVEG-ISPEFMLERCFYQFQNTASVSGLEKELAELESSRDAMT 642

Query: 562  ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
               E  + EY+ L+  I      + + IT P   + +L  GRLI ++    D+GW VVVN
Sbjct: 643  IEDEGTIREYYDLRQKIDTYNSDMRAVITHPNYCVSFLKPGRLIHIKYQDFDFGWSVVVN 702

Query: 622  V-VKKP------------------------------SAGVGTLP------SRGGGY---I 641
               +KP                              S GV  LP      ++G      +
Sbjct: 703  CQARKPPKNAPREEYEPRESYIVDVLLPVSEDSFLKSKGVQPLPPGVKPANKGEPSKLEV 762

Query: 642  VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
            VPV L  I ++S +++ +P +L+P ++R+++   + +++ RFP GL  L+P+++M I D 
Sbjct: 763  VPVLLNCIHSISMVKIKMPSNLKPEESRKAVKKQIMQIQQRFPDGLALLDPIENMNITDD 822

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
            E   L+ +IE LE +L ++PL+ S    ++   +  K E+  +I++ K K+ ++      
Sbjct: 823  EFKRLLRKIEVLESRLISNPLHNSPRLPELYDQYAAKVELVKKIKETKKKITEAMSIIQM 882

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            DELK R RVL++   I+ D VVQLK R AC I +GDEL+++EL+FNG FN+L   Q AA 
Sbjct: 883  DELKCRKRVLRRFQFINEDEVVQLKARVACEISSGDELMLSELLFNGFFNNLTPEQCAAA 942

Query: 821  ASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
             S F+  + + +   +   ELAKPL+ +Q  AR IA++  E KL VN DEYV+S  R  L
Sbjct: 943  LSVFVFEENAKDTPAITNEELAKPLRDIQAQARIIAKVSQESKLPVNEDEYVKS-FRWEL 1001

Query: 880  MDVIYCWSKGATFAEV 895
            M+V++ W+KG +FA++
Sbjct: 1002 MEVMFEWAKGKSFADI 1017


>gi|400600826|gb|EJP68494.1| DSHCT domain-containing protein [Beauveria bassiana ARSEF 2860]
          Length = 1098

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/982 (45%), Positives = 626/982 (63%), Gaps = 70/982 (7%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P    L  +        +P    E A+TY F+LDPFQ +SVA +ER+ES
Sbjct: 127  LSHNIQHQVALPPD--LDYEYVPLSEHKSP---AEPARTYPFKLDPFQSLSVASIERDES 181

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+    F DVGLMTGDV
Sbjct: 182  VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYRDFEALFGDVGLMTGDV 241

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 242  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIIMLPDK 301

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTDFRPTPLQ+Y +P GGSG  +VVDEK 
Sbjct: 302  VRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFYPAGGSGARIVVDEKG 361

Query: 274  QFREDNFVKLQDTFLKQK------IGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
             F EDNF  +      +K      I  +      + +  KGG+   GSD+ KI++M + +
Sbjct: 362  NFNEDNFNIVMKEVEDKKGADSNDINAKTTGKGKNKKTHKGGADE-GSDMSKIIRMTIRK 420

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             F PVIVF+FS+RECE  A+S+SKL  N   EK  V +VFQ+A++ L+E+DR+LP I+ +
Sbjct: 421  SFNPVIVFNFSKRECENMAISISKLSLNDDSEKAMVNKVFQSAIESLSEQDRDLPQIKNL 480

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMPAKTVVFT V KW
Sbjct: 481  LPLLVRGIGVHHSGLLPILKETIEILFQESLIKVLFATETFSIGLNMPAKTVVFTQVTKW 540

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG   R + S EY+QM+GRAGRRG D RGI I+M+D+++E +T K +V G+   L S F 
Sbjct: 541  DGVQRRPLTSSEYVQMAGRAGRRGLDARGIVIMMIDDKLEPDTAKQIVTGQQDRLNSAFY 600

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNL+ R E   + E +++  FHQFQ   ++P + +++  +++E        EA 
Sbjct: 601  LGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAASVPTLERELMAIQQERDGATIPDEAT 658

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE---------GGTDWGWGV 618
            + +Y++++  +    K + S I  P   L +L  GRL+++           GG D+GWGV
Sbjct: 659  IKDYYQIRQQLNAYTKDMRSVIQLPNYSLDFLQPGRLVQIYNPKESTDNVAGGLDFGWGV 718

Query: 619  VVN--------------------------VVKKPSAGV-----------GTLPSRGG--- 638
            +VN                           +   SA +           G +P+ G    
Sbjct: 719  IVNSYPRRAPKLGEPEHIPQESYIIDVLLTISASSADIIPGQIAAEMPTGLVPANGDQNT 778

Query: 639  -GYIVPVQLPLISTLSKIRLSVPPD-LRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
               +VP  L  I  +S+IRL +P + L+    R ++  ++ E++ RFP GLP L+P+++M
Sbjct: 779  INAVVPCLLTCIKAISQIRLFMPKEGLKTDKDRDTVNKSLAEVKRRFPDGLPILDPLENM 838

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQ 755
             I D     L+ +IE LE +L A+PL+ S     +   +  K  ++ +I+  K  +  + 
Sbjct: 839  DIVDESFKKLLRKIEVLESRLLANPLHLSPLLPSLWDQYHAKTVLSEKIKSKKKAIAKAH 898

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLD 813
                 DELK+R RVL++LG I+   VVQLK R AC I +  G EL+++EL+F+  FN+L 
Sbjct: 899  SIAQMDELKSRKRVLRRLGFINDAEVVQLKARVACEISSTEGHELVLSELLFDRFFNELS 958

Query: 814  HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
                A++ SCFI  D+  E   L+ +L KP +++Q  AR +A++  ECKL+VN +EYV S
Sbjct: 959  PETCASILSCFI-FDEKVEATALKEDLQKPYREVQAKARIVAKVSQECKLDVNEEEYVAS 1017

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
             ++  LM+ ++ W++G  F+E+ +MT+++EGS+IR  RRL+E L Q+  AA+ +G  +L 
Sbjct: 1018 -LKWQLMETVFAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMAQAAKVMGNDDLT 1076

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
            KKF  + + +RR I+ + SLYL
Sbjct: 1077 KKFDESLQKIRRDIVAAQSLYL 1098


>gi|358378415|gb|EHK16097.1| hypothetical protein TRIVIDRAFT_39829 [Trichoderma virens Gv29-8]
          Length = 1037

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/947 (46%), Positives = 608/947 (64%), Gaps = 64/947 (6%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+TY F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYA+A   +  QRVIYTSP
Sbjct: 96   EPARTYPFKLDPFQSLSVASIEREESVLVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSP 155

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 156  IKALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 215

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTD
Sbjct: 216  FDEVHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTD 275

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA------ 301
            FRPTPLQ+Y +P GG G  +VVDEK  F  +NF  +    +++K G    +  A      
Sbjct: 276  FRPTPLQNYFYPAGGKGARMVVDEKGNFNAENF-NIVMAEVEEKKGADPADPTAKMKGKG 334

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
              +    G    GSDI KI++M +++ + PVIVF+FS+RECE  A+ +S L+FN   EK 
Sbjct: 335  KNKKTNKGGADEGSDINKIIRMTIKKNYNPVIVFNFSKRECENMALKISNLNFNDDSEKA 394

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
             V +VF++A+D L+E+DR LP I  +LPLL++G+ VHHSGLLP++KE +E+LFQE L+K 
Sbjct: 395  MVNKVFRSAIDSLSEQDRELPQIMNLLPLLEKGVGVHHSGLLPILKETIEILFQESLIKV 454

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETF++GLNMPAKTVVFT V KWDG   R I S EYIQM+GRAGRRG D RGI I+M
Sbjct: 455  LFATETFSIGLNMPAKTVVFTQVTKWDGIKRRPITSSEYIQMAGRAGRRGLDARGIVIMM 514

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            +D+++E    KD+V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ   
Sbjct: 515  IDDKLEPEVAKDIVTGHQDKLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAA 572

Query: 542  ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            ++P + K +  L++E  +L    EA V +Y+ ++  +    K + + I  P   L +L  
Sbjct: 573  SVPSLEKDLMALQQEKDALTIPDEATVKDYYTIRQSLNTYTKDMRAVIQHPNYCLPFLQP 632

Query: 602  GRLIKVRE---------GGTDWGWGVVVN--------------------------VVKKP 626
            GRL+++           GG D+GWGV+ +                           + K 
Sbjct: 633  GRLVQIHNVKESAEKIGGGLDFGWGVITDQYQRRAPKLGEPDFPPQESHIIEVLLYISKS 692

Query: 627  SAGV-----------GTLPS---RGGGYIVPVQLPLISTLSKIRLSVPPD-LRPLDARQS 671
            SA +           G +PS    G   IVP  L  +  +S+IR+ +P D L+  D R+ 
Sbjct: 693  SAEIIPGNLAGNMPPGLIPSGEDDGMFAIVPCLLTCVKAISQIRIFIPKDGLKSDDERKD 752

Query: 672  ILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI 731
               A+ E++ RFP G+P L+P+++M I D     L+ +IE LE +L  +PL+ S     +
Sbjct: 753  SGKALSEVQRRFPDGVPILDPLENMDISDESFKQLLRKIEVLESRLVTNPLHLSPMLPSL 812

Query: 732  -RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
               +  K ++  +I++ K ++  +      DELK+R RVL++LG I+   VVQLK R AC
Sbjct: 813  WDQYHAKVQIMEKIKEKKKEIAKAHSIAQMDELKSRKRVLRRLGFINDAEVVQLKARVAC 872

Query: 791  LIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 848
             I +  G ELL++EL+F+  FN++    +AA+ SCF+  D+  E   L+ EL KP +++Q
Sbjct: 873  EISSTEGHELLLSELLFDRFFNEMTPETIAAVLSCFV-FDEKIEMQALKEELQKPFREIQ 931

Query: 849  ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
              AR IA++  E KL+VN DEYV+S ++  LM+ +Y W++G TFAE+ +M +++EGS IR
Sbjct: 932  AKARMIAKVSQESKLDVNEDEYVQS-LKWQLMETVYAWAQGRTFAEICKMANVYEGSFIR 990

Query: 909  SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              RRL+E + Q+  AA+ +G  +L KKF  + + +RR I+ + SLYL
Sbjct: 991  IFRRLEELIRQMAQAAKVMGNDDLTKKFEESLQKIRRDIVAAQSLYL 1037


>gi|159488881|ref|XP_001702429.1| DEAD-box family ATP dependent helicase [Chlamydomonas reinhardtii]
 gi|158271097|gb|EDO96924.1| DEAD-box family ATP dependent helicase [Chlamydomonas reinhardtii]
          Length = 945

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 452/967 (46%), Positives = 605/967 (62%), Gaps = 71/967 (7%)

Query: 38  CVHEVAVPSGYALTKDEAIHGTF-ANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           C HEVA P G          G+    P   G  A+ Y F++DPFQ+V+V CLE   SV+V
Sbjct: 1   CTHEVAWPPGQ--------QGSLLPPPARAGPPARVYPFKIDPFQQVAVNCLEAGHSVMV 52

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           +AHTSAGKT VAEYA AMA RDK RV+YTSPLKALSNQKYREL +EF DVGLMTGDVT++
Sbjct: 53  AAHTSAGKTVVAEYAFAMALRDKTRVVYTSPLKALSNQKYRELAEEFVDVGLMTGDVTIN 112

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           PNASCLVMTTEILR MLYRGSEV++EV  V++DEIHY++D+ERGVVWEESII  P   + 
Sbjct: 113 PNASCLVMTTEILRSMLYRGSEVVREVQLVVYDEIHYLRDKERGVVWEESIILAPKQARF 172

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA +FAEW+   H  PCHVVYTD+RPTPLQHYVFP GG GLY+VVDE+  FR
Sbjct: 173 VFLSATIPNAREFAEWVSKTHNSPCHVVYTDYRPTPLQHYVFPAGGDGLYMVVDERGVFR 232

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
           +DNF K      +    G+   G               SDIFK+V+MIMER + PVIVFS
Sbjct: 233 DDNFNKAVAVLTETDPSGKGAGGMGG-----------KSDIFKLVRMIMERNYDPVIVFS 281

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FS+RECE  A  M+ L+ N+++EK  V  ++ +A++CL+++D+ LP I  MLP+L+RGI 
Sbjct: 282 FSKRECEALASQMAPLELNSEDEKALVGNIYWSAMECLSQDDQRLPQIVSMLPMLQRGIG 341

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
           VHHSGLLP++KE+VE+LFQEGL+K LFATETF+ GLNMPAKTVVFT VKK+DG + R+I 
Sbjct: 342 VHHSGLLPIVKEVVEILFQEGLLKCLFATETFSTGLNMPAKTVVFTNVKKYDGGAFRWIT 401

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
           SGEYIQMSGRAGRRG DDRG+ I+M+D+++E    K+M+ G P  L S F L Y  +L L
Sbjct: 402 SGEYIQMSGRAGRRGLDDRGVVILMLDQRLEPPVAKEMIKGAPDTLYSAFHLGYNMLLGL 461

Query: 517 MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
           M R EG    E ++  SF QFQ E++LP +  +V+ LE    ++    EA V +Y  L  
Sbjct: 462 M-RVEGA-EPEQLMAASFRQFQTERSLPALEARVAALEAARDAIVIEDEAGVRQYFALLD 519

Query: 577 DIAQLEKKLMSEITRPERVLYYLGSG----RLIKVREGGTDWGWGVVVNVVK-------- 624
            +A L   L   +  P+  L +L  G    R   V    T   WG VVN  +        
Sbjct: 520 QLAGLRAALRQLLNDPKVALPFLQPGACTARPCAVVSEVTHGVWGAVVNFERVGGKKEGG 579

Query: 625 KPSAGVGTLPSR--------------------GGGYIVPVQLPLISTLSKIRLSVPPDLR 664
           +P+  V  L SR                    G    VP+ + LI  LS +R+ +  DLR
Sbjct: 580 EPALVVHALCSRSAVRRRGALPRGTPVRLLPPGDKSGVPMVVTLIDRLSSVRIYLQKDLR 639

Query: 665 PLDARQSILLAVQELESRFPQG--------LPKLNPVKDMKI-EDPEVVDLVNQIEELEH 715
           PLDAR++ +  + E   R            +P L+P  DMK   D       +++E +E 
Sbjct: 640 PLDARKAGVSGLAEALVRLAAAGGKAGGGRVPLLDPEDDMKARRDKTARKTQSKMESVEA 699

Query: 716 KLFAHPLNKSQDENQIR----CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
            L  HPL  S    ++R      QR+      +   + + + +     +DELK R RVL+
Sbjct: 700 LLAKHPLATSLGAAELRARLGALQRRGAAEEAVAAARREAKAATSLILKDELKARQRVLR 759

Query: 772 KLGHIDADGVVQLKGR-AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK- 829
           +L ++D +GVV +KGR AA L   GDEL++ EL+F G FN +    +AA  SCF+  +K 
Sbjct: 760 RLAYVDGEGVVSVKGRLAASLTAGGDELVLAELVFGGAFNGMGLEALAAACSCFVFQEKG 819

Query: 830 -SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            +     LR EL   L  ++++AR++A+++ ECK+ ++   Y+ S  RP LM+ +  W +
Sbjct: 820 GAGGGPKLREELVGALAAVKDAARRVAKVELECKMALDCLRYL-SKFRPDLMEPVAAWVR 878

Query: 889 GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           GA FAE+ +MT +FEGS++R+ RRL+E L QL    + +GEV L ++F AA E ++R I+
Sbjct: 879 GAKFAELAKMTSVFEGSLVRAIRRLEELLRQLGEGLRGIGEVALAERFEAARERIKRDII 938

Query: 949 FSNSLYL 955
           F+ SLYL
Sbjct: 939 FAASLYL 945


>gi|341038500|gb|EGS23492.1| ATP dependent RNA helicase (dob1)-like protein [Chaetomium
            thermophilum var. thermophilum DSM 1495]
          Length = 1097

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 449/981 (45%), Positives = 630/981 (64%), Gaps = 67/981 (6%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P        E I  +   P    E A+TY F+LDPFQ +SVA +ER+ES
Sbjct: 125  LSHNIQHQVALPPDLDY---EYIPLSEHKP--PAEPARTYPFKLDPFQAMSVASIERDES 179

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQK+R+   EF DVGLMTGDV
Sbjct: 180  VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKFRDFQAEFGDVGLMTGDV 239

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 240  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 299

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP GG G+YL+VDEK 
Sbjct: 300  VRYVFLSATIPNAYQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGGKGIYLIVDEKG 359

Query: 274  QFREDNFVKLQDTFLKQKIGGRRE-NGKASGR-----MAKGGSGSGGSDIFKIVKMIMER 327
             F+E NF +      + K     + N +  GR     +  G +  G SDI KI+K+I+++
Sbjct: 360  NFKEHNFNQAMSAIEQSKGADSADPNARMKGRGKNKRIHTGEATDGKSDIAKIIKLIIKK 419

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
             FQPVIVF+FS+RECEQ A++ S L FN+ +E++ V  VF NA+  L+E+DR LP I  +
Sbjct: 420  NFQPVIVFNFSKRECEQLALATSSLKFNSPQEEELVNSVFGNAIGQLSEDDRQLPQISNI 479

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
            LPLL++GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVF+ V KW
Sbjct: 480  LPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFSQVTKW 539

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFR 507
            DG + R +   EYIQM+GRAGRRG DDRGI I+MVDE++E    + +V+G+   L S F 
Sbjct: 540  DGKTRRPLTPSEYIQMAGRAGRRGLDDRGIVIMMVDEKLEPEVARSVVVGQQDRLNSAFH 599

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE 567
            L Y  ILNL+ R E   + E++++  F QFQ   ++P + ++++ L++E  S+    EA 
Sbjct: 600  LGYNMILNLL-RIEA-ISPEYMLERCFFQFQTAHSIPQLERELAALQQERDSMIIPDEAL 657

Query: 568  VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV-REGGTDWGWGVVVN----- 621
            + +YH ++  I Q  K ++  +  P   + Y+  GRL+ V    GTD+GWGV++N     
Sbjct: 658  IKDYHSIREQIDQYTKDMVLVMQHPTNCVKYINPGRLMHVVTSDGTDFGWGVIINFYERR 717

Query: 622  -------------------VVKKPSAGVGTLPSR--------------------GGGYIV 642
                               V+ + S+  G++ S+                    G   +V
Sbjct: 718  PERNNPNPGWSPQESYVVEVLLRLSSDSGSVDSKLKDNQCIPAGIAPVTQKNDPGRWEVV 777

Query: 643  PVQLPLISTLSKIRLSVPP-----DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
            P  L  +  LS+I+L VP       +   + R+ +  ++ E++ RF  G+P ++P+++M 
Sbjct: 778  PCLLSCMHGLSQIKLHVPDKKSGGSMDDPETRRRVGKSLLEVQRRFEDGIPHMDPIENMH 837

Query: 698  IEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQI 756
            I D E   L+ +IE LE +L A+PL+ S    ++    Q K  +  +I++ K ++  +  
Sbjct: 838  IRDVEFKKLLRKIEVLESRLVANPLHNSPLLAELWEKLQYKLSLQDKIKEKKKEISRAHS 897

Query: 757  QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDH 814
                DELK+R RVL++LG I+   VVQ+K R AC I +  G ELL+ EL+FN  FN+L  
Sbjct: 898  IAQMDELKSRKRVLRRLGFINDAEVVQMKARVACEISSTEGHELLLAELLFNRFFNELSP 957

Query: 815  HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
              +AA+ S FI  +K      L+ +LAKP +++Q  AR IA++  E KL+VN DEYV S 
Sbjct: 958  EVIAAVLSVFIFDEKVETTAALKEDLAKPYREIQAQARIIAKVSAESKLDVNEDEYVNS- 1016

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            ++  LM+ +  W+ G  F+EV +M++ +EGS+IR  RRL+E L Q+  AA+ +G   L +
Sbjct: 1017 LKWQLMETVLAWANGQPFSEVCKMSNAYEGSLIRLFRRLEELLRQMAEAAKVMGSDELRE 1076

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            KF  +   +RR I+  NSLYL
Sbjct: 1077 KFETSLAKIRRDIVSFNSLYL 1097


>gi|346324289|gb|EGX93886.1| ATP-dependent RNA helicase DOB1 [Cordyceps militaris CM01]
          Length = 1093

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 441/994 (44%), Positives = 620/994 (62%), Gaps = 94/994 (9%)

Query: 34   LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
            L+ +  H+VA+P    L  +        +P    E A++Y F+LDPFQ +SVA +ER+ES
Sbjct: 122  LSHNIQHQVALPPD--LDYEYVPLSEHKSP---AEPARSYPFKLDPFQSLSVASIERDES 176

Query: 94   VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
            VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+    F DVGLMTGDV
Sbjct: 177  VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYRDFEALFGDVGLMTGDV 236

Query: 154  TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
            T++P ASCLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 237  TINPTASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIIMLPDK 296

Query: 214  IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
            ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTDFRPTPLQ+Y +P GGSG  +VVDEK 
Sbjct: 297  VRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFYPAGGSGARIVVDEKG 356

Query: 274  QFREDNFVKLQDTFLKQKIG-----GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
             F EDNF  +     ++K         ++ GK   +    G    GSD+ KI++M + + 
Sbjct: 357  NFNEDNFNIVMKEVEEKKGADPNDINAKQTGKGKNKKTHKGGSDDGSDMSKIIRMTIRKS 416

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            F PVIVF+FS+RECE  A+S+SKL  N   EK  V +VF +A++ L+E+DR+LP I+ +L
Sbjct: 417  FNPVIVFNFSKRECENMAISISKLSLNDDSEKAMVNKVFHSAIESLSEQDRDLPQIKNLL 476

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            PLL RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMPAKTVVF+ + KWD
Sbjct: 477  PLLVRGIGVHHSGLLPILKETIEILFQESLIKVLFATETFSIGLNMPAKTVVFSQITKWD 536

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G   R + S EY+QM+GRAGRRG D RGI I+M+D+++E +T K++V G+   L S F L
Sbjct: 537  GVKRRPLTSSEYVQMAGRAGRRGLDARGIVIMMIDDKLEPDTAKEIVTGQQDRLNSAFYL 596

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
             Y  ILNL+ R E   + E +++  FHQFQ   ++P + +++  L++E        EA +
Sbjct: 597  GYNMILNLL-RIEA-ISPEFMLERCFHQFQNAASVPSLERELMALQQERDGATIPDEATI 654

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE---------GGTDWGWGVV 619
             +Y++++  +    + + S I  P   L++L  GR +++           GG D+GWGV+
Sbjct: 655  KDYYQIRQQLNTYTRDMRSVIQLPNYCLHFLQPGRPVQIYNPKDSPDNVAGGLDFGWGVI 714

Query: 620  VN-----------------------------------VVKKPSA--GVGTLPSRGGG--- 639
            VN                                   V  +P+A    G +P+ G     
Sbjct: 715  VNHYPRRSTKLGEPEHIPQESYIIDVLLPISASSADIVPGQPAAEMPTGLVPANGDKNTI 774

Query: 640  -YIVPVQLPLISTLSKIRLSVPPD-LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
              IVP  L  I  +S+IR+ +P D L+    R ++  ++ E++ RFP GLP L+P  +M 
Sbjct: 775  IAIVPCLLTCIKAISQIRVFMPKDGLKTDKDRATVNKSLSEVKRRFPDGLPILDPFHNMD 834

Query: 698  IEDPEVVDLVNQIEELEHKLFAHPLNKSQ------DENQIRCF--------QRKAEVNHE 743
            I D     L+ +IE LE  L A+PL+ S       D+   +          ++     H 
Sbjct: 835  ITDESFQKLLRKIEVLESCLLANPLHLSPLLPSLWDQYHAKTLLTEKIKAKKKSIAKAHS 894

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVT 801
            I Q+             DELK+R RVL++LG I+   VVQLK R AC I +  G EL+++
Sbjct: 895  ITQM-------------DELKSRKRVLRRLGFINDAEVVQLKARVACEISSTEGHELVLS 941

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+F+  FN+L     A++ SCFI  D+  E   L+ +L KP +++Q  AR +A++  EC
Sbjct: 942  ELLFDRFFNELTPETCASILSCFI-FDEKVEATALKEDLQKPFREVQAKARIVAKVSQEC 1000

Query: 862  KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            KL+VN +EY  S ++  LM+ ++ W++G  F+E+ +MT+++EGS+IR  RRL+E L Q+ 
Sbjct: 1001 KLDVNEEEYAAS-LKWQLMETVFAWAQGRPFSEICKMTNVYEGSLIRLFRRLEELLRQMA 1059

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             AA+ +G  +L KKF  + + +RR I+ + SLYL
Sbjct: 1060 QAARVMGNDDLTKKFDESLQKIRRDIVAAQSLYL 1093


>gi|167526838|ref|XP_001747752.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773856|gb|EDQ87492.1| predicted protein [Monosiga brevicollis MX1]
          Length = 940

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/959 (45%), Positives = 613/959 (63%), Gaps = 71/959 (7%)

Query: 36  RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           ++C HEVA+P GY        +    +     +MAK Y F LDPFQR ++ C+ER+ESVL
Sbjct: 14  KACTHEVALPQGYN-------YIPLKDTPLPKQMAKEYPFTLDPFQREAIRCIERSESVL 66

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT VAEYAIA++ R+ QRVIYTSP+KALSNQKYREL +EF DVGLMTGD T+
Sbjct: 67  VSAHTSAGKTVVAEYAIALSLREGQRVIYTSPIKALSNQKYRELAEEFGDVGLMTGDTTI 126

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +P ASCLVMTTEILR MLYRGSE+++EV W+    + +     R  V         P+  
Sbjct: 127 NPTASCLVMTTEILRSMLYRGSEIMREVGWLSL--MRFTTCVTRSAV---------PSFS 175

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            +  S T S+   F          PCHVVYT++RPTPLQHY++P GG GL+LVVDE   F
Sbjct: 176 YLTTSTTSSSPPPFPTPFNLRSGSPCHVVYTNYRPTPLQHYLYPQGGDGLHLVVDETGAF 235

Query: 276 REDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVF 335
           RED+F+K   +          E G A+ + +K   G   S +  +V+MIM+R +QP IVF
Sbjct: 236 REDSFMKAMMSL--------SEGGAANKQRSKHQKGK--SPMRSMVRMIMKRGYQPCIVF 285

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SFS+R+CE +AM  S  DF T EEK  +E +F+NA+D L+E+D+ LP +  +LPLL +GI
Sbjct: 286 SFSKRDCETYAMQCSLEDFTTSEEKQQIEMIFKNAIDILSEDDKQLPQVSQVLPLLLKGI 345

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP+IKE++E+LF EGL+K LFATETFAMGLNMPA+TVVFT  +K+DG  HR++
Sbjct: 346 GIHHGGLLPLIKEVIEILFGEGLLKVLFATETFAMGLNMPARTVVFTNARKYDGTEHRWL 405

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEYIQMSGRAGRRG DDRGI I+M+DE++E    K M+ G+   L S F L+Y  +LN
Sbjct: 406 TSGEYIQMSGRAGRRGLDDRGIVILMMDEKVEPTFAKQMLQGQADQLNSAFHLTYNMVLN 465

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
           L+ R E +   E++++ SF QFQ  +A+P +  K+++ + +   +    EA+V EY+ ++
Sbjct: 466 LL-RVE-EVNPEYMLQRSFRQFQNSQAIPGLEAKIAERQRQHDEIVIEDEAKVEEYYNIR 523

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN----VVKKPSAG-- 629
             +    ++L + IT P+ ++ +L  GR+++VR+G  ++GWG+VV+     VK    G  
Sbjct: 524 KQLESFGEELRTLITEPQTIVPFLQPGRVVEVRDGEQNFGWGIVVDFKERAVKSKRNGKN 583

Query: 630 --------VGTL-----------------PSRGGGY-IVPVQLPLISTLSKIRLSVPPDL 663
                   V TL                 P+  G Y + PV LP++S +SK+RL +P DL
Sbjct: 584 QAEEKQIVVTTLLHVASDAGNKKPRPISTPTDKGEYKVTPVLLPVLSQISKVRLFLPKDL 643

Query: 664 RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
              D R++   A+QE   RFP+GLP L+P++DMKI       LV +I+ LE +LFAH L+
Sbjct: 644 SGADKRRAAFNALQEAIRRFPEGLPLLDPIEDMKISTDYARGLVGKIQTLETRLFAHALH 703

Query: 724 KSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
           +S+  ++ +  F  K  +   +  LK  ++ S   +  DELKN  RVL++L     D V+
Sbjct: 704 ESEKRDDMMALFVTKVRLRELVSSLKKDLKQSHSIQQLDELKNMKRVLRRLQFTTNDDVI 763

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-----PVDKSSEQINLR 837
           +LKGR AC + TGDELL+TELMFNG FN+L      AL S FI       +K  E+  + 
Sbjct: 764 ELKGRVACEVSTGDELLLTELMFNGIFNELSMAHSVALLSIFILGTANSKEKEKEKSPVE 823

Query: 838 MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVI 896
            +L   L Q+QE+AR+IA +  + KL+V++  Y E    P  +++V++ W++G  F+E+ 
Sbjct: 824 KDLTNTLNQVQENARRIARVSIDTKLDVDMQSYAEQF--PVEMLEVVHDWAQGRKFSEIC 881

Query: 897 QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           + TD+FEGSIIR+ RRL+E L Q+ AAA+A+G   LE KFA    ++RR I+F+ SLYL
Sbjct: 882 EKTDMFEGSIIRAMRRLEELLKQMIAAAKAIGNTELENKFAEGVTAIRRDIVFAPSLYL 940


>gi|358399456|gb|EHK48799.1| hypothetical protein TRIATDRAFT_53649 [Trichoderma atroviride IMI
            206040]
          Length = 1037

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/960 (45%), Positives = 605/960 (63%), Gaps = 90/960 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+TY F+LDPFQ +SVA +ER+ESVLVSAHTSAGKT VAEYA+A   +  QRVIYTSP
Sbjct: 96   EPARTYPFKLDPFQSLSVASIERDESVLVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSP 155

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 156  IKALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 215

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTD
Sbjct: 216  FDEIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTD 275

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA------ 301
            FRPTPLQ+Y +P GG G  +VVDEK  F E+NF  L    +++K G    +  A      
Sbjct: 276  FRPTPLQNYFYPAGGKGARMVVDEKGYFNEENF-NLVMAEVEEKKGSDPADFTAKMKGKG 334

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
              +    G    GSDI KI++M ++R F PVIVF+FS+RE E  A+ +S L+FN   EK 
Sbjct: 335  KNKKTNKGGADEGSDINKIIRMTIKRNFNPVIVFNFSKREVENMAVKISNLNFNDDSEKA 394

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
             V +VFQ+A++ L+E+DR LP I+ +LPLL++G+ VHHSGLLP++KE +E+LFQE L+K 
Sbjct: 395  MVNKVFQSAIESLSEQDRELPQIQNLLPLLQKGVGVHHSGLLPILKETIEILFQESLIKV 454

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETF++GLNMPAKTVVFT V KWDG + R I S EY+QM+GRAGRRG D RG+ I+M
Sbjct: 455  LFATETFSIGLNMPAKTVVFTQVTKWDGVNIRPITSSEYVQMAGRAGRRGLDARGVVIMM 514

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            +D+++E +T K +V G+   L S F L Y  ILNL+ R E   + E +++  FHQFQ   
Sbjct: 515  IDDKLEPDTAKQIVTGQQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAA 572

Query: 542  ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            ++P + K +  L++E  +L    EA V +Y+ ++  +    K + + I  P   L +L  
Sbjct: 573  SVPSLEKDLMALQQEKDALTIPDEATVKDYYTIRQQLNTYTKDMRAVIQHPNYCLPFLQP 632

Query: 602  GRLIKVRE---------GGTDWGWGVVVNVVKKPSAGVG--------------------- 631
            GRL+++           GG D+GWGV+ +   + +  +G                     
Sbjct: 633  GRLVQIHNPKESVEKIGGGLDFGWGVITDQYPRRTPKLGEPDYPPQESHIIEVLLYLSKS 692

Query: 632  ---TLPSRGGG----------------YIVPVQLPLISTLSKIRLSVPPD-LRPLDARQS 671
                +P +  G                 +VP  L  I  +S+IR+ +P + L+  D R+ 
Sbjct: 693  SAEIIPGQPSGEMPPGLKPSTDDDGMFAVVPCLLTCIKAISQIRIFMPKEGLKSDDDRKD 752

Query: 672  ILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ----- 726
               A+ E++ RFP G+P L+P+++M I D     L+ +IE LE +L  +PL+ S      
Sbjct: 753  SAKALSEVQRRFPDGVPVLDPLENMDISDESFKQLLRKIEVLESRLVTNPLHMSPMLPSL 812

Query: 727  -DENQIRC--------FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
             D+  ++          +++    H I QL             DELK+R RVL++LG I+
Sbjct: 813  WDQYHVKVQILDKIKEKKKEIAKAHSIAQL-------------DELKSRKRVLRRLGFIN 859

Query: 778  ADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN 835
               VVQLK R AC I +  G ELL++EL+F+  FN++    +AA+ SCF+  D+  E   
Sbjct: 860  DAEVVQLKARVACEISSTEGHELLLSELLFDRFFNEMTPETIAAVLSCFV-FDEKIETQA 918

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
            L+ EL KP +++Q  AR IA++  E KL+VN D+Y +S ++  LM+ IY W++G  F E+
Sbjct: 919  LKEELQKPYREIQAKARLIAKVSQESKLDVNEDQYAQS-LKWQLMETIYAWAQGRPFVEI 977

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +M +++EGS IR  RRL+E L Q+  AA+ +G  +L KKF  +   +RR I+ + SLYL
Sbjct: 978  CKMANVYEGSFIRIFRRLEELLRQMAQAAKVMGNDDLTKKFEESLGKIRRDIVAAQSLYL 1037


>gi|340517763|gb|EGR48006.1| nuclear exosomal RNA helicase [Trichoderma reesei QM6a]
          Length = 1098

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 438/961 (45%), Positives = 608/961 (63%), Gaps = 91/961 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+TY F+LDPFQ +SVA +ER ESVLVSAHTSAGKT VAEYA+A   +  QRVIYTSP
Sbjct: 156  EPARTYPFKLDPFQSLSVASIEREESVLVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSP 215

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 216  IKALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 275

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTD
Sbjct: 276  FDEIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTD 335

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA------ 301
            FRPTPLQ+Y +P+GG G  +VVDE+  F E+NF  L    +++K G    +  A      
Sbjct: 336  FRPTPLQNYFYPMGGKGARMVVDERGTFNEENF-NLVMAEVEEKKGSDPADFNAKMKGKG 394

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
              +    G    GSDI KI++M + + F PVIVF+FS+RECE  A+ +S L+FN   EK 
Sbjct: 395  KNKKTNKGGADEGSDINKIIRMTVRKNFNPVIVFNFSKRECENMALKISNLNFNDDSEKA 454

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
             V +VFQ+A++ L+E DR LP I+ +LPLL++G+ VHHSGLLP++KE +E+LFQE L+K 
Sbjct: 455  MVNKVFQSAIESLSEADRELPQIQNLLPLLQKGVGVHHSGLLPILKETIEILFQESLIKV 514

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETF++GLNMPAKTVVFT V KWDG   R I S EY+QM+GRAGRRG D RG+ I+M
Sbjct: 515  LFATETFSIGLNMPAKTVVFTQVTKWDGVQRRPITSSEYVQMAGRAGRRGLDARGVVIMM 574

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            +D+++E    K +V G+   L S F L Y  ILNL+ R E   + E +++  FHQFQ   
Sbjct: 575  IDDKLEPEVAKQIVTGQQDRLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAA 632

Query: 542  ALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            ++P + K +  L++E  +L    EA V +Y+ ++  +    K + + I  P   L +L  
Sbjct: 633  SVPALEKDLMALQQEKDALTIPDEATVKDYYTIRQQLNTYTKDMRAVIQHPNYCLPFLQP 692

Query: 602  GRLIKVRE---------GGTDWGWGVVVN--------------------------VVKKP 626
            GRL+++           GG D+GWGV+ +                           + K 
Sbjct: 693  GRLVQIHNVKESAEKLGGGLDFGWGVITDQYARRPPKLGEPEYPPQESHIIEVLLYISKS 752

Query: 627  SAGV------GTLP---------SRGGGYIVPVQLPLISTLSKIRLSVPPD-LRPLDARQ 670
            SA +      G +P           G   +VP  L  I  +S+IR+ +P D L+  D R+
Sbjct: 753  SADIIPGHLAGDIPPGLKPAADEDDGMFAVVPCLLTCIKAISQIRVFMPKDGLKSDDDRR 812

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN------- 723
                A+ E++ RFP G+P L+P+++M I D     L+ +IE LE +L A+PL+       
Sbjct: 813  DAGKALSEVQRRFPDGVPILDPLENMDITDESFKQLLRKIEVLESRLVANPLHLSPLLPS 872

Query: 724  -------KSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
                   K Q  ++I+  +++    H I Q+             DELK+R RVL++LG I
Sbjct: 873  LWDQYHAKVQILDKIKEKKKEIAKAHSIAQM-------------DELKSRKRVLRRLGFI 919

Query: 777  DADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
            +   VVQLK R AC I +  G ELL++EL+F+  FN++    +AA+ SCF+  D+  E  
Sbjct: 920  NDAEVVQLKARVACEISSTEGHELLLSELLFDRFFNEMTPELIAAVLSCFV-FDEKLEAQ 978

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             L+ EL KP +++Q  AR IA++  E KL+VN D+YV+S ++  LM+ +Y W++G TFAE
Sbjct: 979  ALKEELQKPFREIQAKARMIAKVSQESKLDVNEDQYVQS-LKWQLMETVYAWAQGRTFAE 1037

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + +M +++EGS IR  RRL+E + Q+  AA+ +G  +L KKF  + + +RR I+ + SLY
Sbjct: 1038 ICKMANVYEGSFIRIFRRLEELIRQMAQAAKVMGNDDLMKKFEESLQKIRRDIVAAQSLY 1097

Query: 955  L 955
            L
Sbjct: 1098 L 1098


>gi|322704335|gb|EFY95931.1| ATP-dependent RNA helicase DOB1 [Metarhizium anisopliae ARSEF 23]
          Length = 1098

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/950 (45%), Positives = 608/950 (64%), Gaps = 66/950 (6%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+T++F+LDPFQ +SVA +ER+ES+LVSAHTSAGKT VAEYA+A   +  QRVIYTSP
Sbjct: 153  EPARTWNFKLDPFQSLSVASIERDESILVSAHTSAGKTVVAEYAVAQCLKRNQRVIYTSP 212

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV+
Sbjct: 213  IKALSNQKYRDFEAIFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWVV 272

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDEIHYM+D+ RGVVWEE+II LP  ++ VFLSAT+ NA QFAEWI  +H Q CHVVYTD
Sbjct: 273  FDEIHYMRDKTRGVVWEETIIMLPDKVRYVFLSATIPNAFQFAEWIAKIHHQACHVVYTD 332

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF-VKLQDTFLKQKIGGRRENGKASGRMA 306
            FRPTPLQ+Y +P GG G  +VVDEK  F E NF + +++   K+  G    N K  G+  
Sbjct: 333  FRPTPLQNYFYPSGGKGARIVVDEKGNFNEHNFNLVMKEIEDKKGAGSNDINAKQRGKGK 392

Query: 307  KGGSGSG----GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
                  G    GSDI KI++M +++KF PVIVF+FS+ ECE  A+++S L FN   EK  
Sbjct: 393  NKKINKGGVDEGSDIHKIIRMTIKKKFNPVIVFNFSKAECENMALNISSLSFNDDSEKAM 452

Query: 363  VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            V +VF +A++ L+E+DR LP I+ +LPLL+RG+ VHHSGLLP++KE +E+LFQE L+K L
Sbjct: 453  VRKVFHSAIESLSEQDRELPQIKNLLPLLERGVGVHHSGLLPILKETIEILFQESLLKVL 512

Query: 423  FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
             ATETF++GLNMPAKTVVFT V KWDG   R I S EYIQM+GRAGRRG D RG+ I+M+
Sbjct: 513  VATETFSIGLNMPAKTVVFTQVTKWDGVKRRPITSSEYIQMAGRAGRRGLDARGVVIMMI 572

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            D+++E +T K +V G    L S F L Y  ILNL+ R E   + E +++  FHQFQ   +
Sbjct: 573  DDKLEPDTAKGIVTGHQDKLNSAFYLGYNMILNLL-RIEA-ISPEFMLERCFHQFQNAAS 630

Query: 543  LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
            +P + K++  L++E   L    EA + +Y++++  +    + + + I +P   + +L  G
Sbjct: 631  VPSLEKELMSLQQERDGLSIPDEATIKDYYQIRQQLNSYTEDMRAVIQQPTHCIEFLQPG 690

Query: 603  RLIKVRE---------GGTDWGWGVVVN-------------------------------- 621
            RL+++           GG D+GWGV+VN                                
Sbjct: 691  RLVQIYNPKEAHDNVTGGLDFGWGVIVNHYPRRAPRLGEPEWEPQESHIIDVMLPISASS 750

Query: 622  ---VVKKPS---------AGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDA- 668
                  +P+         AG  T  +     ++P  L  +  +S+IR+ +P D    DA 
Sbjct: 751  ADITPGQPTGAMPPGLKPAGADTADTATINVVIPCLLTCMKAISQIRIFMPKDGLKADAD 810

Query: 669  RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE 728
            +     ++ E++ RF  G+P L+P+++M+I D     L+ +IE LE +L A+PL+ S   
Sbjct: 811  KDQARKSLAEVKRRFTDGIPILDPLENMEIVDDSFKKLLRKIEVLESRLLANPLHMSPML 870

Query: 729  NQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
              +   +  K ++  ++++ K  +  +      DELK+R RVL++LG I+   VVQLK R
Sbjct: 871  PSLWDQYSEKVQLIEKVKEKKKAISKAHSIAQMDELKSRKRVLRRLGFINESEVVQLKAR 930

Query: 788  AACLIDT--GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
             AC I +  G ELL++EL+F+  FN+L     AA+ SCFI  D+  E   L+ +L KP +
Sbjct: 931  VACEISSTEGHELLLSELLFDRFFNELTPETCAAVLSCFI-FDEKVETQALKEDLQKPYR 989

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            ++Q  AR IA++  ECKL+VN +EYV ++++  LM+ +Y W++G  F E+ +MT  +EGS
Sbjct: 990  EIQAKARIIAKVSQECKLDVNEEEYV-TSLKWQLMETVYAWAQGRPFIEICKMTKTYEGS 1048

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +IR  RRL+E L Q+  AA+ +G  +L KKF  + + +RR I+ + SLYL
Sbjct: 1049 LIRLFRRLEELLRQMGEAAKVMGNEDLVKKFDESLQKIRRDIVAAQSLYL 1098


>gi|426384727|ref|XP_004058906.1| PREDICTED: LOW QUALITY PROTEIN: superkiller viralicidic activity
            2-like 2 [Gorilla gorilla gorilla]
          Length = 1036

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/973 (44%), Positives = 596/973 (61%), Gaps = 101/973 (10%)

Query: 38   CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 110  CTHEVALPADEDYLPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 158

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKY---------RELHQEFKDV 146
            VSAHTSAGKT  AE          Q  I  S    L  +KY         R+LH      
Sbjct: 159  VSAHTSAGKTVCAEGNTG-----SQTQIGWSQTPGL--KKYESWDGAVYRRKLHH----- 206

Query: 147  GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEES 206
                           ++    ILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+
Sbjct: 207  ---------------VLDIWRILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEET 251

Query: 207  IIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLY 266
            II LP  +  VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+
Sbjct: 252  IILLPDNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLH 311

Query: 267  LVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMI-- 324
            LVVDE   FREDNF          +  G    G   GR  KGG+       F+ +  +  
Sbjct: 312  LVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR--KGGTKGNLELCFERILHVNY 366

Query: 325  MERKFQPVIVFSFSRRECE---------QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
            + R     +   F  + C+          H      L+F   EEK  VE+VF NA+DCL+
Sbjct: 367  IFRLLXYFLSXFFFLKLCKGLDDILVSLTHFDISVPLNFLLDEEKKMVEEVFSNAIDCLS 426

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
            +ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMP
Sbjct: 427  DEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMP 486

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
            A+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++
Sbjct: 487  ARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLL 546

Query: 496  LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
             G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE
Sbjct: 547  KGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEE 604

Query: 556  EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
            +   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+KV+  G D+G
Sbjct: 605  QYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFG 664

Query: 616  WGVVVNVVKKP----------------------------SAGVGTLPS----RGGGYIVP 643
            WGVVVN  KK                             SA     P+    +G   +VP
Sbjct: 665  WGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVP 724

Query: 644  VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
            V + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +
Sbjct: 725  VLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGL 784

Query: 704  VDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDE 762
              ++ ++E  EH++++HPL N    E      ++KA++  +I+  K +++ ++     DE
Sbjct: 785  KKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDE 844

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
            LK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  AL S
Sbjct: 845  LKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLS 904

Query: 823  CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            CF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV
Sbjct: 905  CFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDV 963

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
            +Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     
Sbjct: 964  VYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITK 1023

Query: 943  LRRGIMFSNSLYL 955
            ++R I+F+ SLYL
Sbjct: 1024 IKRDIVFAASLYL 1036


>gi|393911807|gb|EFO22056.2| hypothetical protein LOAG_06429 [Loa loa]
          Length = 1008

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/894 (45%), Positives = 590/894 (65%), Gaps = 51/894 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +C HEV +P          +      P      AK Y F+LD FQR ++ C++ + SVLV
Sbjct: 125  NCSHEVVLPPNMEYV---PLKPRTTAP------AKMYEFQLDAFQREAITCIDNSHSVLV 175

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            SAHTSAGKT VA YAIAM+ RDKQRVIYTSP+KALSNQKYREL +EF DVGLMTGD TL+
Sbjct: 176  SAHTSAGKTVVALYAIAMSLRDKQRVIYTSPIKALSNQKYRELEEEFGDVGLMTGDNTLN 235

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            P+ASC+VMTTEILR MLYRGSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  +  
Sbjct: 236  PDASCIVMTTEILRSMLYRGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDTVHY 295

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA QFA+W+ +LH QP HV+YTD+RP PLQH+++P GGSGLY VV+ +  FR
Sbjct: 296  VFLSATIPNARQFADWVVYLHDQPVHVIYTDYRPVPLQHFIYPAGGSGLYEVVNMQGIFR 355

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
            ED F +  +     ++G   + G       K G  SG   +  I++ + ER   PVI+FS
Sbjct: 356  EDKFTEAMNVL--SQVG---DAGHGGINKGKKGGTSGTPHVVNIIRTLKERDMIPVIIFS 410

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FSR+ECE +A  M+ LDFNT++EK  V+++F NA+  L++ED  LP I  +LPLL RGI 
Sbjct: 411  FSRKECEAYATQMTNLDFNTEDEKAKVKEIFVNAISLLSDEDSKLPEIGRVLPLLLRGIG 470

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHHSGLLP++KE++E+LF EGL+K LFATETFAMGLNMPA+TV+FT+ +K+DG  +R+I 
Sbjct: 471  VHHSGLLPIVKEVIEILFGEGLIKTLFATETFAMGLNMPARTVLFTSARKFDGKDYRWIT 530

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRGKDDRG+ I+MVD+QM  +  K ++ G P PL S FRL+Y  +LNL
Sbjct: 531  SGEYIQMSGRAGRRGKDDRGLVILMVDQQMGQDVAKQIIKGAPDPLNSQFRLTYNMVLNL 590

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
            + R EG    E +++NSF+QFQ   ALP +   V + +EE A+     E E++ Y++++ 
Sbjct: 591  L-RVEG-INPEFMLENSFYQFQNYDALPQLYGNVERKKEELAAYKIDRETEISGYYQMEK 648

Query: 577  DIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--PSAGVG--- 631
             +  L++ +   + +P+ ++ +L +GRL+ +     D+GW  +++  KK  P   +G   
Sbjct: 649  QVDVLKEAVKEVVMKPKHLIPFLQAGRLLHIVSNDKDFGWAALLDFHKKANPVDPLGLDL 708

Query: 632  ---------------------------TLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLR 664
                                           +G   +V V +  +S +S  R+ +P +L+
Sbjct: 709  MYVLDVLMLLSAESAKNLSDITQLRPPNANEKGVVEVVSVAISCVSEISAARVKLPQNLK 768

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              + +QS    ++E+  RF   +P L+P+ DMKI D  + + +++++ LE +  +HPL  
Sbjct: 769  AYEGKQSAGRVIKEVLKRFNGIMPLLDPLNDMKINDLVLQENISKLQALEKRKDSHPLRA 828

Query: 725  SQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            +   ++I + +++K E+  E++  K++++ +Q     DELK R RVL++L + D + V+ 
Sbjct: 829  NSKFDEIYKQYEKKLELEAELKVAKTELKKAQSLLQLDELKCRKRVLRRLQYCDENDVIT 888

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
             KGR +C +   DEL++TE+MF G F +L   Q+AAL SCF+  +K+     L  +L+  
Sbjct: 889  QKGRVSCEVSAADELMLTEMMFGGIFTELATPQLAALLSCFVFEEKAG-GTKLADDLSGC 947

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
            L+ +QE AR+IA++  E KLE++ D+YVES  +P LMDV++ W  GA+FAE+++
Sbjct: 948  LRAMQEYARRIAKVTKESKLEIDEDKYVES-FKPHLMDVVHAWCTGASFAEILK 1000


>gi|19114484|ref|NP_593572.1| TRAMP complex ATP-dependent RNA helicase (predicted)
            [Schizosaccharomyces pombe 972h-]
 gi|3219961|sp|O13799.1|YE02_SCHPO RecName: Full=Uncharacterized helicase C17H9.02
 gi|2330709|emb|CAB11211.1| TRAMP complex ATP-dependent RNA helicase (predicted)
            [Schizosaccharomyces pombe]
          Length = 1030

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/966 (43%), Positives = 619/966 (64%), Gaps = 59/966 (6%)

Query: 29   KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
            K +R+     +H+V VP  Y        +      + +   AKTY FELDPFQ  ++ C+
Sbjct: 85   KDKRHDRSFALHKVVVPDDYD-------YIPLNKHIPSDPPAKTYPFELDPFQSTAIKCV 137

Query: 89   ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
            ER ESVLVSAHTSAGKT +AEYAIA A +++QRVIYTSP+K+LSNQKYREL  EF DVGL
Sbjct: 138  ERMESVLVSAHTSAGKTVIAEYAIAQALKNRQRVIYTSPIKSLSNQKYRELLSEFGDVGL 197

Query: 149  MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
            MTGDV+++P+ASCL+MTTEILR MLY+ SE++ E+AWVIFDE+HYM+D++RGVVWEE++I
Sbjct: 198  MTGDVSINPSASCLIMTTEILRAMLYKNSEIMHEIAWVIFDEVHYMRDKDRGVVWEETLI 257

Query: 209  FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
             LP AI+ +FLSAT+ NA QFA WI  +HKQPCHVVYTD+RPTPLQH+++P G  G+Y++
Sbjct: 258  LLPDAIRFIFLSATLPNALQFARWISEIHKQPCHVVYTDYRPTPLQHFIYPQGADGIYML 317

Query: 269  VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
            VDEK +F+ +NF K+ +         R+EN   S +  K  S      + +I+ M++  +
Sbjct: 318  VDEKNKFKTENFKKVLEVL---DHSTRQENYSKSSKKVKKSSS-----LERIINMVLSNR 369

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
            + P+IVF FS++ECE +A    KLD N  E K+ V ++F +A++ L+EEDR L   E M 
Sbjct: 370  YDPIIVFCFSKKECEINAHQFGKLDLNDTENKELVTEIFDSAINQLSEEDRGLRQFEEMR 429

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL RGI +HHSGLLP++KELVE+LFQEGLV+ LFATETF++GLNMPA+TV+FT  +K+ 
Sbjct: 430  SLLLRGIGIHHSGLLPILKELVEILFQEGLVRILFATETFSIGLNMPARTVLFTKAQKFS 489

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
            G++ R++ SGEY+QMSGRAGRRG D +G+ I+++D+ ++    + ++ G+   L S F L
Sbjct: 490  GNNFRWLTSGEYMQMSGRAGRRGIDTKGLSIVILDQSIDEQAARCLMNGQADVLNSAFHL 549

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
            SY  ILNLM R E + + E ++K SF+QFQ  ++LP I +++ +L+ E  S++   E  V
Sbjct: 550  SYGMILNLM-RIE-EISPEDILKKSFYQFQNMESLPLIKEELMQLKNEETSINIPNETAV 607

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--- 625
             E+H LKL + +  +++   +T P+  L YL SGRLI+++ GG  + WGV+VNV+K+   
Sbjct: 608  KEFHDLKLQLEKYGEEIQKVMTHPDNCLPYLQSGRLIQIKLGGIIFPWGVLVNVIKREFD 667

Query: 626  --------------------------------PSAGVGTLPSRGGGY-IVPVQLPLISTL 652
                                            PS  V   P+    Y IV V L  +  +
Sbjct: 668  PNTREQVAPHETYVLDVLLPISSNSMSNHKVNPSILVPPRPNETPLYEIVSVLLTAVCNI 727

Query: 653  SKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEE 712
            S IR+ +P +L   +++      V E+   F + +P L+P++ M IE   +   + ++E 
Sbjct: 728  SSIRIYMPRELNSNESKLRAYRRVNEVIEEFKE-IPYLDPLEHMHIESSTLSLSLRKLEI 786

Query: 713  LEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ-IQKFRDELKNRSRVL 770
            LE KLF  P  K S+   +   F++K  +  +I+ + +K+ +++ I + R ELK R RVL
Sbjct: 787  LEPKLFDSPYYKDSKHRAEYHEFRKKLNLRAQIKDISTKITNTEAIIQLR-ELKIRQRVL 845

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            ++LG    + V+ +KGR AC I +GDELL+ EL+F G FN +   ++AA  SCF+  DKS
Sbjct: 846  RRLGFCTLENVIDIKGRVACEITSGDELLLVELIFQGFFNQMPPEEIAAALSCFVYEDKS 905

Query: 831  S-EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
                +NL+    K    + E+A++IA +  E KL+ N  +Y+    +P +M+ +  W  G
Sbjct: 906  EVSTLNLKEPFKKMYLTIIEAAKRIATVSLESKLQFNESDYLHQ-FKPDIMEPVSLWING 964

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            A+F E+  ++ ++EGSI+R+ RRLDE L QL  AA  +G   L++K     + L R I+F
Sbjct: 965  ASFQEICIVSKLYEGSIVRTFRRLDELLKQLEHAAIVLGNNELKEKSVLTEQKLHRDIIF 1024

Query: 950  SNSLYL 955
            S SLYL
Sbjct: 1025 SASLYL 1030


>gi|323452288|gb|EGB08162.1| hypothetical protein AURANDRAFT_268, partial [Aureococcus
           anophagefferens]
          Length = 916

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/929 (44%), Positives = 595/929 (64%), Gaps = 56/929 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AKTY+F LD FQ  +V C++R+ESVLVSAHTSAGKT  AEYAIA + RD QRVIYTSP+K
Sbjct: 1   AKTYAFPLDGFQAKAVECIDRDESVLVSAHTSAGKTVCAEYAIAKSLRDGQRVIYTSPIK 60

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+R+L +EF+DVGLMTGD+T++P+A CLVMTTEILR MLYRGSEV++EV WV++D
Sbjct: 61  ALSNQKFRDLQEEFQDVGLMTGDITINPSAKCLVMTTEILRSMLYRGSEVMREVKWVVYD 120

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHYM+D+ERGVVWEESII LP +++ VFLSAT+ N+ QFA WI   H+QPCHVVYTD+R
Sbjct: 121 EIHYMRDKERGVVWEESIILLPHSVRFVFLSATIPNSVQFASWIAVTHRQPCHVVYTDYR 180

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           PTPL HYVF  GG GL+LVVDEK  F+E NF K     + Q   G   +   S +     
Sbjct: 181 PTPLVHYVFAAGGEGLHLVVDEKGAFKEANFEKA----MAQLTAGDDPSAPKSAQSGPAK 236

Query: 310 SGSGGS------DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
              GG+      D+ +I+ +I+E+   P I+F+FS+ +CE +A++M K+DFNT EE+D V
Sbjct: 237 KKRGGNSKQQDDDLKRIIGLIVEKDMAPAIIFAFSKNQCEANAVAMKKMDFNTDEERDVV 296

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
           + V+ +A++ L+EEDR LP ++ +LPLLKRG+ +HH GLLP++KE+VE+LFQEGL+K LF
Sbjct: 297 DAVYGSAMESLSEEDRGLPQVKTLLPLLKRGVGIHHGGLLPIVKEVVEILFQEGLLKILF 356

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATETFA+G+NMPAKTVVFT  +K+DG   R++ +GEYIQMSGRAGRRGKDD+G  I ++D
Sbjct: 357 ATETFAIGINMPAKTVVFTETRKFDGKDFRWLSAGEYIQMSGRAGRRGKDDKGTVIQILD 416

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           E+ME    KD++ G    L S++ ++Y  +LNL+ R EG    ++++++SFHQ+Q E   
Sbjct: 417 EKMEPQVAKDILYGGADALDSSYHVTYNMLLNLL-RVEGA-DPDYLVRSSFHQYQQEADA 474

Query: 544 PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEIT----RPERVLYYL 599
           P I ++ +  +  A +      A+VA   K  +D+A               +P+  L +L
Sbjct: 475 PQILERAAAAQAGADAQSFDDAADVARTRK-HVDVAAALAATRRRALVLARKPKHCLQWL 533

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIV------PVQLP------ 647
             GR+  V         GV    +      + T PS     +V      P++ P      
Sbjct: 534 QPGRVAAV--AFASEADGVACGALAATQECLETRPSHVAEVLVRCAADAPLEAPAPRGDG 591

Query: 648 ------------LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF----PQGLPKLN 691
                        +++LS IR+ +P DLR    R  +  +V E+E RF     + LP L 
Sbjct: 592 PDEGRVVVVPLVALASLSAIRVYMPQDLRKPQERAKLRTSVVEVEKRFGGDGGEPLPTLR 651

Query: 692 PVKDMKI--EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKS 749
              D+K+   +PE   +  Q   L  +L AHP   +     +  F  +  +  E + L+ 
Sbjct: 652 DDDDLKLAAREPEYAAVAAQERALVAELAAHPPGATV---PVDAFAARQALVDEARALRK 708

Query: 750 KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
              ++Q    RD+L+   +VLK+LGH+  D V+ LKGRAAC ++T DEL++ EL+ +G F
Sbjct: 709 AAAEAQELVLRDDLRRMRKVLKRLGHVSLDAVIALKGRAACELNTADELVIAELLLDGVF 768

Query: 810 NDLDHHQVAALASCFIPVDK---SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
            DL+   +AAL SC +  +K    +   N+R +L  P  +LQ +A+ + +  ++ K+ V+
Sbjct: 769 GDLEPPVIAALLSCMVFGEKRKGDAGPPNVRKQLLAPFAKLQAAAKLVGKAMHDAKIAVD 828

Query: 867 VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
           VDEYV+    P +M++++ W+ GA F +V+++TD FEG++IR  RRLDE L QL +AA A
Sbjct: 829 VDEYVDK-FNPDMMELLFEWANGAKFVDVMKVTDAFEGTVIRVIRRLDELLRQLASAAFA 887

Query: 927 VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +G   L+ KF  AS +++R I+F+ SLYL
Sbjct: 888 IGAFELKGKFEDASAAIKRDIVFAASLYL 916


>gi|303285234|ref|XP_003061907.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456318|gb|EEH53619.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 979

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 428/972 (44%), Positives = 595/972 (61%), Gaps = 71/972 (7%)

Query: 38  CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           C+H+V  P  +        +   +NP      AK Y FELD FQR SV  +E  ESV+V+
Sbjct: 25  CLHDVVYPPDWRPNPKARAYDP-SNP------AKHYKFELDTFQRKSVEVMEMGESVMVA 77

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT VAEYAIAMA RD+QRV+YTSPLKALSNQK+REL  EF DVGLMTGD T++ 
Sbjct: 78  AHTSAGKTVVAEYAIAMALRDRQRVVYTSPLKALSNQKFRELRDEFADVGLMTGDTTINT 137

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
           +ASCLVMTTE+LR MLY+G EV++EV WVIFDEIHYM+D ERGVVWEE+I  LP A++  
Sbjct: 138 DASCLVMTTEVLRSMLYKGGEVMREVGWVIFDEIHYMRDPERGVVWEETIAMLPSAVRYA 197

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA +FAEWI   H  PCH+VYTDFRPTPL+HYV P GG G+YL  D   +FR 
Sbjct: 198 FLSATIPNAREFAEWIVKTHAHPCHLVYTDFRPTPLEHYVHPSGGDGVYLCYDRDNKFRA 257

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMAKGG-----------------------SGSGG 314
           DNFVK  +          +E+G A+GR A                            +  
Sbjct: 258 DNFVKAINAV------APKEDGYAAGRTAHNKANAGDGSGGGGGGGGNNGKAGGEDTAAN 311

Query: 315 SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
            DI KI++M++E+ + P IVFSFS+REC+  A S+ KLD   + EKD ++ V+ + +D L
Sbjct: 312 RDIHKIIRMVVEKNYDPCIVFSFSKRECQSMAESLHKLDLCDENEKDVIDTVYWSGLDAL 371

Query: 375 NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
            +ED+ LP ++ +LPLLKRGI VHHSG+LP++KE VELLFQEG +K L ATET + GLNM
Sbjct: 372 KDEDKRLPQVQNLLPLLKRGIGVHHSGMLPILKETVELLFQEGFLKVLIATETMSTGLNM 431

Query: 435 PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
           PA+ VVFT+ +K+DG  +R+I SGEY+QMSGRAGRRG DDRG+ ++M+DE+M+    KDM
Sbjct: 432 PARCVVFTSPRKYDGAGYRWITSGEYVQMSGRAGRRGLDDRGLVVLMMDERMDPAVAKDM 491

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP--DIGKKVSK 552
           + G+  PL S F ++Y S++N+M R EG    E++I  SF QFQ ++ +P  +       
Sbjct: 492 LHGRSDPLNSAFHVTYGSMINMM-RMEGAENVENLISKSFAQFQNDRKVPELEAKAAALA 550

Query: 553 LEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV---RE 609
           +E +A +++  G+A VAEY  L   ++ L  +    +  P   + +L  GRL++V     
Sbjct: 551 VERDAVAIE-DGDA-VAEYVNLADTLSVLRAERRDVLNLPAHCVPFLQPGRLVRVCARDP 608

Query: 610 GGTDWGWGV------------VVNVVKKPSAGVGT-------LPSRGGG--YIVPVQLPL 648
             T+WG  V            V+ VV++    V +       + S  G    +VP+++  
Sbjct: 609 KRTEWGVVVKHERDGGEYVVDVLCVVEEEDRSVASESRRDDEMGSAAGAKRRVVPLRVSQ 668

Query: 649 ISTLSKIRLSVPPDLRPLDARQSILLAVQELESR--FPQGLPKLNPVKDMKIEDPEVVDL 706
           I  LS +R+ +P D+RP DAR  +  +V E+  R  F  G+P L+P  DMKI       L
Sbjct: 669 IDRLSSVRVYLPKDMRPSDARARVQKSVVEMFKRDAFKDGVPFLDPESDMKITHESFKKL 728

Query: 707 VNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
             +I  LE  L AH L    D   ++    ++ +++   +  K + + +    FRDELK 
Sbjct: 729 TRRITALEGMLSAHALRDDPDLTEKVASHAKRRDLSLRHKIAKKEAKAAAGLCFRDELKQ 788

Query: 766 RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
           R RVLK+LGH+D DGVV  KGR AC + T D L+ TEL+F+G F +L      A  S  +
Sbjct: 789 RLRVLKRLGHVDDDGVVLTKGRVACEMTTADALVTTELVFDGAFKELPAELCCAAISALV 848

Query: 826 PVDKSSE--QINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVI 883
             +   +  +I L         +++E AR +     ECKLE++V  Y +S  RP LMD+ 
Sbjct: 849 WREAGPDIQEIKLSPACKDAHARIREVARAVGRHVAECKLEMDVAAYADS-FRPDLMDLT 907

Query: 884 YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
             WS G +F ++++MT + EGS++R+ RR++E + QL  A Q VG+  L +KF +  E +
Sbjct: 908 RAWSTGTSFVDLMKMTSLHEGSVVRAIRRMEEVMRQLATACQNVGDAELREKFESCREMV 967

Query: 944 RRGIMFSNSLYL 955
           +R I+F  SL+L
Sbjct: 968 KRDIVFCPSLFL 979


>gi|444725109|gb|ELW65688.1| Superkiller viralicidic activity 2-like 2 [Tupaia chinensis]
          Length = 880

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/879 (46%), Positives = 550/879 (62%), Gaps = 123/879 (13%)

Query: 110 YAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEIL 169
           YAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEIL
Sbjct: 92  YAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEIL 151

Query: 170 RGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQF 229
           R MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QF
Sbjct: 152 RSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYVFLSATIPNARQF 211

Query: 230 AEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK 289
           AEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FREDNF         
Sbjct: 212 AEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL-- 269

Query: 290 QKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
            +  G    G   GR  KGG+                                       
Sbjct: 270 -RDAGDLAKGDQKGR--KGGT--------------------------------------- 287

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
                   EEK  VE+VF NA+DCL++ED+ LP                           
Sbjct: 288 ------KDEEKKMVEEVFSNAIDCLSDEDKKLP--------------------------- 314

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
                     +ALFATETFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGR
Sbjct: 315 ----------QALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGR 364

Query: 470 RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
           RG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+ R E +   E++
Sbjct: 365 RGMDDRGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYM 422

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEI 589
           ++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++  +A+L K++   I
Sbjct: 423 LEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKIRQQLAKLGKEIEEYI 482

Query: 590 TRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP----------------------- 626
            +P+  L +L  GRL+KV+  G D+GWGVVVN  KK                        
Sbjct: 483 HKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSK 542

Query: 627 -----SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
                SA     P+    +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++Q
Sbjct: 543 ESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPVDNRQSVLKSIQ 602

Query: 678 ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQR 736
           E++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N    E      ++
Sbjct: 603 EVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEK 662

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
           KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++KGR AC I + D
Sbjct: 663 KAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSAD 722

Query: 797 ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
           ELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA+
Sbjct: 723 ELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAK 782

Query: 857 IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
           +  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E 
Sbjct: 783 VSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEEL 841

Query: 917 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 842 LRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 880


>gi|159474816|ref|XP_001695521.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158276004|gb|EDP01779.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1143

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/945 (47%), Positives = 582/945 (61%), Gaps = 168/945 (17%)

Query: 42  VAVPSGY-----ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           VA+P GY     A   D  IHGT   PVY G  AK Y F LD FQ  SVACLER ESVLV
Sbjct: 43  VAIPEGYDEAAAAEKLDPVIHGTLQEPVYTGPRAKEYPFVLDAFQETSVACLERRESVLV 102

Query: 97  SAHTSAGKTAVAE----------------YAIAMAFRDKQRVIYTSPLKALSNQKYRELH 140
           SAHTSAGKT VAE                 A+  A R  Q         ALSNQK+REL 
Sbjct: 103 SAHTSAGKTVVAEREKRCSGADVLWLQLYLALTWACRTSQ---------ALSNQKFRELS 153

Query: 141 QEFK-DVGLMTGDVTLSPNASCLVMTTEILRGMLYR----GSEVLKEVAWVIFDEIHYMK 195
           + F  DVGLMTGDV+L+PNASC+VMTTEILR M+YR    GSE+L+EVAWV+FDE+HYM+
Sbjct: 154 EAFGGDVGLMTGDVSLNPNASCIVMTTEILRSMIYRQVQRGSELLREVAWVVFDEVHYMQ 213

Query: 196 DRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQH 255
           DRERGVVWEE+IIFL    KMVFLSAT+SN++QFA W+ HLHK PCHVVYTD+RPTPLQH
Sbjct: 214 DRERGVVWEETIIFLDHHTKMVFLSATLSNSSQFAAWVAHLHKSPCHVVYTDYRPTPLQH 273

Query: 256 YVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGS 315
           Y +P+GG GLYL++DE+  FR +NF +++++ L    G     G     M +        
Sbjct: 274 YAYPLGGEGLYLLLDERGNFRTENFERVKES-LAMTAGPSGGPGGKPPDMRE-------- 324

Query: 316 DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM----SK-------------------- 351
            +  I+++I  +K++PVI FSFSRR+CEQ+A ++    SK                    
Sbjct: 325 QVATILQVIKLQKWEPVIFFSFSRRDCEQYANALVAKRSKDKGGNDKEAPADEAERERER 384

Query: 352 -LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
             DFN+ EEK  VE+++ NA+ CL+EEDR L  I  MLPLL+RGI VHHSGLLP++KEL+
Sbjct: 385 LFDFNSAEEKVQVEEIYANALQCLSEEDRELKPIARMLPLLRRGIGVHHSGLLPILKELI 444

Query: 411 ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
           E+LFQEGL+K LF TETFAMGLNMPA+ VVFTA+KKWDG  +R++ SGEYIQMSGRAGRR
Sbjct: 445 EILFQEGLLKVLFTTETFAMGLNMPARCVVFTAMKKWDGTENRWVNSGEYIQMSGRAGRR 504

Query: 471 GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE--H 528
           G DDRG+C++M+D  +      D   GKP+PL+S+F+L+YY++LN++ R EG       +
Sbjct: 505 GMDDRGLCLMMLDAAL------DEATGKPSPLISSFKLTYYTMLNMLRRLEGSEAGSMAY 558

Query: 529 VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSE 588
           VI +SF QFQ E  LP + K++S+++EE A+L   GE  +A Y +L+ DI++   +L   
Sbjct: 559 VIAHSFQQFQQEAQLPKMEKELSEIQEEMAALGKEGEEAMASYQQLRTDISEAAGQL--- 615

Query: 589 ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPL 648
             +P   L +L +GRL                  V+  S GV      G G +V V    
Sbjct: 616 --QPSHCLPFLRAGRL------------------VRVSSGGV----DWGTGVVVSVM--- 648

Query: 649 ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
                                            R P   P           + E+ ++V 
Sbjct: 649 ---------------------------------RRPDAAPA---------AEGELPEIVA 666

Query: 709 QIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
           +IE LE +L  +P+ K++ D  +   + ++A +    ++L+  MR SQ+  FR+E   R+
Sbjct: 667 RIEGLESQLVRNPVYKAEKDAAKFAPYLKRAALAARAEELRGAMRTSQLAAFREEAACRT 726

Query: 768 RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
                             GRAAC IDT DELL +EL+ NGTF+ LD H + ALASC IPV
Sbjct: 727 -----------------AGRAACEIDTADELLASELLLNGTFSGLDSHALVALASCLIPV 769

Query: 828 DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
           +KS+E I L  +LA+PL QLQ +AR IAE+  ECKL+++ DEYV+   +P LMDVIY WS
Sbjct: 770 EKSTETIKLTTQLAEPLAQLQAAARHIAEVSRECKLDLDPDEYVDG-FKPALMDVIYAWS 828

Query: 888 KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
           KGA+FA+V +MTDIFEGS++R+ RRLDE + QL  AA AVG+  L
Sbjct: 829 KGASFAQVCEMTDIFEGSLVRATRRLDELMGQLANAAAAVGDNEL 873


>gi|324502364|gb|ADY41041.1| Superkiller viralicidic activity 2-like protein 2 [Ascaris suum]
          Length = 866

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/875 (46%), Positives = 582/875 (66%), Gaps = 42/875 (4%)

Query: 114 MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGML 173
           MA  DKQRVIYTSP+KALSNQKYREL +EF DVGLMTGDVTL+P+ASCLVMTTEILR ML
Sbjct: 1   MALGDKQRVIYTSPIKALSNQKYRELGEEFSDVGLMTGDVTLNPDASCLVMTTEILRSML 60

Query: 174 YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
           Y+GSE+++EV WVIFDEIHYM+D+ERGVVWEE+II LP  +  VFLSAT+ NA QFA+W+
Sbjct: 61  YKGSEIMREVGWVIFDEIHYMRDKERGVVWEETIILLPDNVHYVFLSATIPNARQFADWV 120

Query: 234 CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG 293
             LHKQP HVV TD+RPTPLQH+V+P GG+GLY VV+ + +FRED F +         + 
Sbjct: 121 VFLHKQPVHVVCTDYRPTPLQHFVYPAGGAGLYEVVNVQGKFREDKFKEAMSV-----LR 175

Query: 294 GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD 353
              + G+   R  K G  SG S++ KI++ I ER   P I+FSFSR+ECE +A  +  +D
Sbjct: 176 SVGDEGRGGIRRGKRGGTSGASEVMKIIRTIKERDMVPCIIFSFSRKECEAYATQLKDVD 235

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
           FN  + K  +++++ NA+  L++EDR LP I  +LP L RGI +HHSGLLP++KEL+E+L
Sbjct: 236 FNDDKAKKMIKEIYTNAISLLSDEDRKLPQIGQVLPYLLRGIGIHHSGLLPIVKELIEIL 295

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F EGL+  LFATETFAMGLNMPA+TV+FT+ +K+DG  +R+I SGEYIQMSGRAGRRGKD
Sbjct: 296 FGEGLITTLFATETFAMGLNMPARTVLFTSARKFDGKDYRWITSGEYIQMSGRAGRRGKD 355

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
           +RG+ I+MVD+QM  +  K ++ G   PL S FRL+Y  +LNL+ R EG    E +++NS
Sbjct: 356 ERGLVILMVDQQMGQDVAKQIIKGAADPLNSQFRLTYNMVLNLL-RVEG-INPEFMLENS 413

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPE 593
           F+QFQ   ALP + + V K E+E      + E E+A Y++L+  IA +++ +   + +P 
Sbjct: 414 FYQFQNYDALPRLYENVQKKEDELKQFVVNKELEIAGYYQLQKQIAAIKESIRQTVMKPS 473

Query: 594 RVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS-------------------------- 627
            V+ +L +GRL+ V  G  D+GW  ++N  KKP                           
Sbjct: 474 FVVPFLQAGRLVHVVAGTKDFGWAPILNFHKKPDPMDPMGGSLLYILDVAMLLSSESAKD 533

Query: 628 -AGVGTLPSRGGG-----YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
            + V  L   G G      +VP+ L  +  +S +R+ +P D+R  DA+QS+   V+E+  
Sbjct: 534 LSSVAHLQPPGAGDAGVIEVVPMMLDCVMEMSAVRIKLPQDIRSRDAKQSVGKTVKEVLR 593

Query: 682 RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEV 740
           RF   LP L+P+ DMKI+D  +   + ++E LE +  +HP+ K  +  Q+   ++ K E+
Sbjct: 594 RFNSNLPSLDPLNDMKIKDSTLEANIAKLEALEKRNSSHPIRKDANFKQLYGKYEEKLEL 653

Query: 741 NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
             E++  K++++ +Q     DELK R RVL++L + D   V+  KGR AC I   DELL+
Sbjct: 654 EAELKVAKAELKKAQSLLQLDELKCRKRVLRRLQYCDESDVITHKGRVACEISAADELLL 713

Query: 801 TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
           TE++F G F  L   Q+AAL SCF+  ++ +    +   L+  L+ +Q+ AR+IA+I  E
Sbjct: 714 TEMLFGGQFTTLLPEQMAALLSCFV-FEEKANATKVAESLSGVLRSMQDYARRIAKITKE 772

Query: 861 CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            KL+++ D+YV S  +P +MDV++ W  GA F+++++ TDIFEGSIIR  RRL+E L ++
Sbjct: 773 SKLDIDEDKYVGS-FKPHMMDVVHEWCSGAAFSDILKKTDIFEGSIIRCLRRLEELLREM 831

Query: 921 RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           + AA+A+G ++ E+KF  A   L+R I+F+ SLYL
Sbjct: 832 KNAAKAMGNMSTEEKFEQARTKLKRDIVFTASLYL 866


>gi|401403863|ref|XP_003881591.1| DEAD/DEAH box helicase family protein, related [Neospora caninum
            Liverpool]
 gi|325116004|emb|CBZ51558.1| DEAD/DEAH box helicase family protein, related [Neospora caninum
            Liverpool]
          Length = 1202

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 434/1018 (42%), Positives = 610/1018 (59%), Gaps = 134/1018 (13%)

Query: 53   DEAIHGTFANPVYNG---EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAE 109
            DE    T AN   NG     A+ Y F LD FQ+ SV CLE  ESVLV+AHTSAGKT VAE
Sbjct: 204  DEQAAATQANEGENGVKRTPARQYKFRLDAFQQRSVLCLEAGESVLVAAHTSAGKTVVAE 263

Query: 110  YAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTE 167
            YAIAM+ RDKQRV+YTSP+KALSNQKYR+L + F  ++VGLMTGDVTL PNAS +VMTTE
Sbjct: 264  YAIAMSIRDKQRVVYTSPIKALSNQKYRDLSESFGAENVGLMTGDVTLHPNASIMVMTTE 323

Query: 168  ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
            ILR MLYRGS ++ E+ W+IFDEIHYM+DRERGVVWEESI+ +P  ++ VFLSAT+ NA 
Sbjct: 324  ILRSMLYRGSHLVNELKWLIFDEIHYMRDRERGVVWEESIVLVPATMRFVFLSATIPNAR 383

Query: 228  QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
            +FAEW+  +  QPCHV+YTD+RPTPLQHY+FP GG G+YLV+DEK+ FRE+NF K   T 
Sbjct: 384  EFAEWVAAIKHQPCHVLYTDYRPTPLQHYMFPAGGEGVYLVMDEKKVFREENFHKAVATL 443

Query: 288  LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
             K       E    + +M + G     S I K+V M   R++ PVI+F FS+RECE +A 
Sbjct: 444  HKTV----EEQAMETKQMQRRGRARNRSSIEKLVLMCHARQYTPVIIFCFSKRECEANAT 499

Query: 348  SM----------SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            ++            +D  T EEK  +E++F NA++ L EEDRNLP ++ +LPLLKRGI +
Sbjct: 500  ALLGGNSAGRGSGNVDLTTDEEKQLIEEIFNNALETLEEEDRNLPQVKSILPLLKRGIGI 559

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP +KE++E+LFQE L++ LF+TETF+MG+NMPAKTV+FTA++K+DG  +R + S
Sbjct: 560  HHGGLLPFVKEMIEILFQESLLRVLFSTETFSMGVNMPAKTVIFTAIRKFDGQEYRIVNS 619

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQM+GRAGRRG DDRGI IIM DEQ++    K + +G+ APL+STF L +  +LNL 
Sbjct: 620  GEYIQMAGRAGRRGLDDRGIVIIMFDEQVDPEEAKQLFMGQGAPLISTFHLGFNMLLNLF 679

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEK-----------------------ALPDIGKKVSKLE 554
               +   T   +I  SF  FQ  +                       AL D+ +K     
Sbjct: 680  RIEDANPT--FMITRSFAHFQRNRKALHLEKEKEELEEEVKKVREIHALADVDEK----- 732

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK-VREGGTD 613
             +  S D   EA V EY++LK D+A L K+L +   +   +L YL +GR+++ V E GTD
Sbjct: 733  -DRPSFDV--EAAVCEYYELKHDLAGLGKELRNLAMQERYILRYLQAGRIVRLVEENGTD 789

Query: 614  WGWGVVVNVVKK---PSAG---------------VGTLPSR-----GGGY---------- 640
            WGW   ++ +     PS                 V   P       G G           
Sbjct: 790  WGWATCLSKISNRCVPSTNAVMEGPAEQLVVDCLVACAPESIRDEDGKGVTGAVASSEKP 849

Query: 641  -----------------IVPVQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELES 681
                             +VP  +  I ++SK R+++P   D+R  DAR+S+   ++++E 
Sbjct: 850  RPAKNVDGVEKKDYVLAVVPFTISSIRSISKCRMTLPVGVDVRSGDARRSLHFQLKKVEK 909

Query: 682  RF-PQ-GLPKLNPVKDMKIEDPEVVDLVNQIEELEHK-----LFAHPLNKSQDENQIRCF 734
            RF P+ G+P L+P++DMKI +P + +LV  I E E +     L+ HPL  +  +      
Sbjct: 910  RFEPEGGIPLLDPLEDMKIPEPRLPELVAAIAEKERQLTQNPLYEHPLCGTYYDAH---- 965

Query: 735  QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT 794
             R+ ++  +++ ++  + + +    +D L+   RVL++L  +DA+ VV +KGR AC I T
Sbjct: 966  HRRVQLQTKLRTIRESLDNQKQLVMKDTLRAMRRVLRQLDFLDANDVVTVKGRVACEITT 1025

Query: 795  GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKI 854
             DEL+  EL+F   F  ++   V AL SC +  +K  E       L   L++++E A+ I
Sbjct: 1026 ADELVAAELLFQNVFETMEVEAVCALLSCLVFQEKHDEPEPKEEVLLSCLEKVKEVAKHI 1085

Query: 855  AEIQNECK-----------------LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
            A +  E +                     VD+YV +  +  +M + Y W+KG  FA+V+ 
Sbjct: 1086 AGVCVESRYIDPLGASKAAEGSGSACTQTVDDYV-NKFQHAIMSLTYRWAKGEKFADVVS 1144

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             T I+EG++IR  RRL+E + Q+  A++++G  +LEKKF    + +RRGI+FS+SLYL
Sbjct: 1145 GTSIYEGTVIRCLRRLEELMRQMACASKSIGNPDLEKKFLEGIKKIRRGIVFSSSLYL 1202


>gi|39104516|dbj|BAC97855.2| mKIAA0052 protein [Mus musculus]
          Length = 744

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/753 (50%), Positives = 524/753 (69%), Gaps = 20/753 (2%)

Query: 214 IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
           +  VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE  
Sbjct: 1   VHYVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENG 60

Query: 274 QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVI 333
            FREDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI
Sbjct: 61  DFREDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVI 114

Query: 334 VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
           +FSFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKR
Sbjct: 115 IFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKR 174

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           GI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R
Sbjct: 175 GIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFR 234

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
           +I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +
Sbjct: 235 WISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMV 294

Query: 514 LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           LNL+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K
Sbjct: 295 LNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYK 352

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP------S 627
           ++  +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK       S
Sbjct: 353 IRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSKESLKNS 412

Query: 628 AGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF 683
           A     P+    +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RF
Sbjct: 413 ATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQRRF 472

Query: 684 PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNH 742
           P G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N    E      +RKA+V  
Sbjct: 473 PDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQVAL 532

Query: 743 EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
           +I+  K +++ ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+TE
Sbjct: 533 DIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTE 592

Query: 803 LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
           +MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E K
Sbjct: 593 MMFNGLFNDLSSEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAK 652

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           LE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  
Sbjct: 653 LEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQ 711

Query: 923 AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 712 AAKAIGNTELENKFAEGITKIKRDIVFAASLYL 744


>gi|323333027|gb|EGA74429.1| Mtr4p [Saccharomyces cerevisiae AWRI796]
          Length = 852

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/856 (46%), Positives = 573/856 (66%), Gaps = 53/856 (6%)

Query: 149 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
           MTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II
Sbjct: 1   MTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETII 60

Query: 209 FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
            LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLV
Sbjct: 61  LLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLV 120

Query: 269 VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKM 323
           VDEK  FRE+NF K   + +  +IG    +  + G+     KGGS  G +  DI+KIVKM
Sbjct: 121 VDEKSTFREENFQKAMAS-INNQIGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKM 179

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           I ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP 
Sbjct: 180 IWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQ 239

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+
Sbjct: 240 IKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTS 299

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
           V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L 
Sbjct: 300 VRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLD 359

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
           S F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK ++L+++   ++  
Sbjct: 360 SAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKFAELKKDFDGIEVE 417

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNV 622
            E  V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+ 
Sbjct: 418 DEENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDF 477

Query: 623 VKK--------------------------------------PSAGVGTLPSRGG----GY 640
            K+                                      P+   G  P+  G      
Sbjct: 478 AKRINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICA 537

Query: 641 IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
           ++P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED
Sbjct: 538 VIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIED 597

Query: 701 PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKF 759
            + + L+ +I+ L  KL ++PL  S   +++   + RK +++ +++QLK K+ +SQ    
Sbjct: 598 EDFLKLMKKIDVLNTKLSSNPLTNSMRLDELYGKYSRKHDLHEDMKQLKRKISESQAVIQ 657

Query: 760 RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
            D+L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AA
Sbjct: 658 LDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAA 717

Query: 820 LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
           L SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  L
Sbjct: 718 LLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHEL 776

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
           M+V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A 
Sbjct: 777 MEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAV 836

Query: 940 SESLRRGIMFSNSLYL 955
            + + R I+ + SLYL
Sbjct: 837 LKLIHRDIVSAGSLYL 852


>gi|323354456|gb|EGA86295.1| Mtr4p [Saccharomyces cerevisiae VL3]
          Length = 852

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/856 (46%), Positives = 572/856 (66%), Gaps = 53/856 (6%)

Query: 149 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
           MTGD+T++P+A CLVMTTEILR MLYRGSEV++EVAWVIFDE+HYM+D+ERGVVWEE+II
Sbjct: 1   MTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGVVWEETII 60

Query: 209 FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
            LP  ++ VFLSAT+ NA +FAEWIC +H QPCH+VYT+FRPTPLQHY+FP  G G+YLV
Sbjct: 61  LLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTNFRPTPLQHYLFPAHGDGIYLV 120

Query: 269 VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGGS--DIFKIVKM 323
           VDEK  FRE+NF K   +   Q IG    +  + G+     KGGS  G +  DI+KIVKM
Sbjct: 121 VDEKSTFREENFQKAMASISNQ-IGDDPNSTDSRGKKGQTYKGGSAKGDAKGDIYKIVKM 179

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           I ++K+ PVIVFSFS+R+CE+ A+ MSKLDFN+ +EK+ + ++F NA+  L E DR LP 
Sbjct: 180 IWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDDEKEALTKIFNNAIALLPETDRELPQ 239

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEG +K LFATETF++GLNMPAKTVVFT+
Sbjct: 240 IKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGFLKVLFATETFSIGLNMPAKTVVFTS 299

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
           V+KWDG   R++  GEYIQMSGRAGRRG DDRGI I+M+DE+ME    K MV G+   L 
Sbjct: 300 VRKWDGQQFRWVSGGEYIQMSGRAGRRGLDDRGIVIMMIDEKMEPQVAKGMVKGQADRLD 359

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
           S F L Y  ILNLM R EG  + E ++++SF QFQ   ++P + KK ++L+++   ++  
Sbjct: 360 SAFHLGYNMILNLM-RVEG-ISPEFMLEHSFFQFQNVISVPVMEKKFAELKKDFDGIEVE 417

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTD-WGWGVVVNV 622
            E  V EY++++  I    + +   +T P   L +L  GRL+++   G D +GWG VV+ 
Sbjct: 418 DEENVKEYYEIEQAIKGYREDVRQVVTHPANALSFLQPGRLVEISVNGKDNYGWGAVVDF 477

Query: 623 VKK--------------------------------------PSAGVGTLPSRGG----GY 640
            K+                                      P+   G  P+  G      
Sbjct: 478 AKRINKRNPSAVYTDHESYIVNVVVNTMYIDSPVNLLKPFNPTFPEGIRPAEEGEKSICA 537

Query: 641 IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
           ++P+ L  I ++  +RL +P D+R    ++++  +++E+  RFP G+P L+PVK+MKIED
Sbjct: 538 VIPITLDSIKSIGNLRLYMPKDIRASGQKETVGKSLREVNRRFPDGIPVLDPVKNMKIED 597

Query: 701 PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKF 759
            + + L+ +I+ L  KL ++PL  S   +++   + RK +++ +++QLK K+ +SQ    
Sbjct: 598 EDFLKLMKKIDVLNTKLSSNPLTNSMRLDELYGKYSRKHDLHEDMKQLKRKISESQAVIQ 657

Query: 760 RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
            D+L+ R RVL++LG    + +++LKGR AC I +GDELL+TEL+FNG FN+L   Q AA
Sbjct: 658 LDDLRRRKRVLRRLGFCTPNDIIELKGRVACEISSGDELLLTELIFNGNFNELKPEQAAA 717

Query: 820 LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
           L SCF   ++  E   L+ ELA+PL+ ++E A KIA+I  + K+EV   +YVES  R  L
Sbjct: 718 LLSCFAFQERCKEAPRLKPELAEPLKAMREIAAKIAKIMKDSKIEVVEKDYVES-FRHEL 776

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
           M+V+Y W +GATF ++ +MTD++EGS+IR  +RL+E + +L   A  +G  +L++K  A 
Sbjct: 777 MEVVYEWCRGATFTQICKMTDVYEGSLIRMFKRLEELVKELVDVANTIGNSSLKEKMEAV 836

Query: 940 SESLRRGIMFSNSLYL 955
            + + R I+ + SLYL
Sbjct: 837 LKLIHRDIVSAGSLYL 852


>gi|347842134|emb|CCD56706.1| similar to ATP-dependent RNA helicase DOB1 [Botryotinia fuckeliana]
          Length = 951

 Score =  764 bits (1974), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/840 (46%), Positives = 540/840 (64%), Gaps = 61/840 (7%)

Query: 21  GTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPF 80
           G PEE +   Q N+     H+V++P  Y        H   A P      A+T+ FELDPF
Sbjct: 117 GAPEETALVLQHNIQ----HQVSLPPDYEYIPISQ-HKAPAEP------ARTWPFELDPF 165

Query: 81  QRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELH 140
           Q+V++A ++RNESVLVSAHTSAGKT  AEYAIA   ++ QRVIYTSP+KALSNQKYRE  
Sbjct: 166 QKVAIASIQRNESVLVSAHTSAGKTVTAEYAIAQCLKNNQRVIYTSPIKALSNQKYREFT 225

Query: 141 QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERG 200
            +F DVGLMTGDVT++P A+CLVMTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ RG
Sbjct: 226 ADFGDVGLMTGDVTINPTATCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKSRG 285

Query: 201 VVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPV 260
           VVWEE+II LP  ++ VFLSAT+ NA QFAEWI   H QPCH+VYTDFRPTPLQHY FP 
Sbjct: 286 VVWEETIILLPDKVRYVFLSATIPNAMQFAEWITKTHNQPCHIVYTDFRPTPLQHYFFPA 345

Query: 261 GGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----GRRENGKASGRMAKGGSGSGGS 315
           G  G++L+VDEK  FREDNF K   T   +K         ++ G+   +    G+   GS
Sbjct: 346 GADGIHLIVDEKGNFREDNFSKAMATIEDKKGSDPADINAKQKGRGKDKKTNKGANKEGS 405

Query: 316 DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
           DI+KIV+MIM + + PVIVFSFS+RECE +A+ MS + FN Q EKD V +VF++A++ L+
Sbjct: 406 DIYKIVRMIMLKHYNPVIVFSFSKRECEAYALQMSSMAFNDQSEKDMVSKVFESAIESLS 465

Query: 376 EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
           EEDR LP I+ +LPLL+RGI VHHSGLLP++KE +E+LFQE L+K LFATETF++GLNMP
Sbjct: 466 EEDRTLPQIQHILPLLRRGIGVHHSGLLPILKETIEILFQENLIKVLFATETFSIGLNMP 525

Query: 436 AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
           AKTVVFT+V+K+DG+  RY+   E++QMSGRAGRRG DDRGI I+M++++ME  + K +V
Sbjct: 526 AKTVVFTSVEKFDGEKMRYLTPSEFVQMSGRAGRRGLDDRGIVIMMINDKMEPESAKTIV 585

Query: 496 LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
            G+   L S F L Y  ILNLM R EG  + E ++++ F+QFQ   ++  + K++  L+ 
Sbjct: 586 RGEQDKLNSAFYLGYNMILNLM-RLEG-ISPEFMLEHCFYQFQNTSSVTGLEKELQDLQI 643

Query: 556 EAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
               +    EA + +Y+ L+  +    K +   I  P   L ++  GR++ ++    D+G
Sbjct: 644 ARDEVQIPDEATIKDYYDLRQQLTTYTKDMRDVINHPNYCLQFMQPGRVVHIKHQDHDFG 703

Query: 616 WGVVVN-VVKKPSAG----------------------------------VGTLPSRGGGY 640
           WG VV    ++P  G                                  +G +P   G  
Sbjct: 704 WGAVVKFTARRPGKGSAQEFPPQQAYILDVLLLVSSDSTVTTQTQNDLPLGIMPPAAGDK 763

Query: 641 ----IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
               IVPV L  +  +  +R+ +P DL P + R  +  +++E++ RFP G+  L+P+++M
Sbjct: 764 GKMEIVPVLLSCVEAIGHVRIFLPKDLHPANERNQVRKSLEEVKRRFPDGIAVLDPIENM 823

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQ 755
            I D     L+ +IE LE +L ++PL N  +  +    +  K E   +I++ +  +  + 
Sbjct: 824 GITDDSFKRLLRKIEVLESRLLSNPLHNSPRLPDLYNQYAGKLEFTKQIKEKRKAIASAL 883

Query: 756 IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI-DTGD--ELLVTELMFNGTFNDL 812
                DELK+R RVL++LG I+   VV+LK R AC I  TGD  ELL++EL+FNG FNDL
Sbjct: 884 SIMQLDELKSRKRVLRRLGFINEQEVVELKARVACEISSTGDGHELLLSELLFNGYFNDL 943


>gi|237843633|ref|XP_002371114.1| RNA helicase, putative [Toxoplasma gondii ME49]
 gi|211968778|gb|EEB03974.1| RNA helicase, putative [Toxoplasma gondii ME49]
          Length = 1206

 Score =  763 bits (1970), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/1007 (43%), Positives = 608/1007 (60%), Gaps = 145/1007 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+ Y F LD FQ+ SV CLE  ESVLV+AHTSAGKT VAEYAIAM+ RDKQRV+YTSP
Sbjct: 226  EPARQYKFRLDAFQQRSVLCLEAGESVLVAAHTSAGKTVVAEYAIAMSIRDKQRVVYTSP 285

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQKYR+L + F  ++VGLMTGDVTL PNAS +VMTTEILR MLYRGS ++ E+ W
Sbjct: 286  IKALSNQKYRDLSESFGAENVGLMTGDVTLHPNASIMVMTTEILRSMLYRGSHLVNELKW 345

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            +IFDEIHYM+DRERGVVWEESI+ +P  ++ VFLSAT+ NA +FAEW+  +  QPCHV+Y
Sbjct: 346  LIFDEIHYMRDRERGVVWEESIVLVPSTMRFVFLSATIPNAREFAEWVATIKHQPCHVLY 405

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDTFLKQKIGGRRENGKA 301
            TD+RPTPLQHY+FP GG G+YLV+DEK+ FREDNF      L  T  +Q +  ++  G+ 
Sbjct: 406  TDYRPTPLQHYMFPAGGEGVYLVMDEKKVFREDNFHTAVATLHKTVEEQAMETKQRRGRG 465

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM---------SKL 352
              R +          I K++ M   R++ PVI+F FS+RECE +A ++           +
Sbjct: 466  RNRSS----------IEKLILMCHTRQYTPVIIFCFSKRECEANATALLGSGSRNAGGNV 515

Query: 353  DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
            D  T+EEK  +E++F NA++ L EEDR+LP ++ +LPLLKRGI +HH GLLP +KE++E+
Sbjct: 516  DLTTEEEKQLIEEIFNNALETLEEEDRHLPQVKSILPLLKRGIGIHHGGLLPFVKEMIEI 575

Query: 413  LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
            LFQE L++ LF+TETF+MG+NMPAKTV+FTA++K+DG  +R + SGEYIQM+GRAGRRG 
Sbjct: 576  LFQESLLRVLFSTETFSMGVNMPAKTVIFTAIRKYDGQEYRIVNSGEYIQMAGRAGRRGL 635

Query: 473  DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
            DDRGI IIM DEQ++    K + +G+ APL+STF L +  +LNL  R E    A  +I  
Sbjct: 636  DDRGIVIIMFDEQVDPEEAKQLFMGQGAPLISTFHLGFNMLLNLF-RIEDANPA-FMISR 693

Query: 533  SFHQFQYE-KAL----------------PDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            SF  FQ   KAL                 DI       E +  S D   EA V EY++LK
Sbjct: 694  SFAHFQRNRKALHLEKEKEELEEEVKKVKDIHALADVDEADRPSFDV--EAAVREYYELK 751

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIK-VREGGTDWGWGVVVNVVKK---PSAG-- 629
             D++ L K+L     + + +L YL +GR+++ V E GTDWGW   ++ + K   PS    
Sbjct: 752  HDLSGLGKELRDLAMQEKYILRYLQAGRIVRLVDESGTDWGWATCLSKISKRCVPSTNAV 811

Query: 630  -------------VGTLP-------------------------SRGGGY--------IVP 643
                         V   P                         S  GG         +V 
Sbjct: 812  RDGPTEQLVVDCLVACTPESIRETHGQGATGAVAASEKPQPAKSVNGGVEKKDYVLAVVS 871

Query: 644  VQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELESRF-PQ-GLPKLNPVKDMKIE 699
              +  I ++SK R+++P   D+R  DAR+S+   ++++E RF P+ G+P L+P+++MKI 
Sbjct: 872  FTISCIRSISKCRMTLPVGVDVRSEDARRSLHFQLKKVEKRFEPEGGIPLLDPIQEMKIP 931

Query: 700  DPEVVDLVNQIEELEHK-----LFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR-- 752
            +P + +LV  I E E +     L+ HPL  +             + +H   QL++K+R  
Sbjct: 932  EPRLPELVAAIAEKEKRLTQNPLYEHPLCGTY-----------YDAHHRRVQLQTKLRIL 980

Query: 753  ----DSQIQ-KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
                DSQ Q   +D L+   RVL++L  +DA+ VV +KGR AC I T DEL+  EL+F  
Sbjct: 981  RESLDSQKQLVMKDTLRAMRRVLRQLDFLDANDVVTVKGRVACEITTADELVAAELLFQN 1040

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK----- 862
             F  ++   + AL SC +  +K  E       L   L++++E A+ IA +  E +     
Sbjct: 1041 VFETMEVEAICALLSCLVFQEKHDEPEPKEEVLLTCLEKVKEVAKNIAAVCVESRYIDPV 1100

Query: 863  --------------LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
                              VD+YV +  +  +M + Y W+KG  FA+V+  T I+EG++IR
Sbjct: 1101 GSSATKPSENSASPCTQTVDDYV-NKFQHAIMSLTYRWAKGEKFADVLSGTSIYEGTVIR 1159

Query: 909  SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              RRL+E + Q+  A++++G  +LEKKF    + +RRGI+FS+SLYL
Sbjct: 1160 CLRRLEELMRQMACASKSIGNPDLEKKFLEGIKKIRRGIVFSSSLYL 1206


>gi|221484727|gb|EEE23021.1| hypothetical protein TGGT1_038730 [Toxoplasma gondii GT1]
          Length = 1206

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1013 (42%), Positives = 608/1013 (60%), Gaps = 157/1013 (15%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+ Y F LD FQ+ SV CLE  ESVLV+AHTSAGKT VAEYAIAM+ RDKQRV+YTSP
Sbjct: 226  EPARQYKFRLDAFQQRSVLCLEAGESVLVAAHTSAGKTVVAEYAIAMSIRDKQRVVYTSP 285

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQKYR+L + F  ++VGLMTGDVTL PNAS +VMTTEILR MLYRGS ++ E+ W
Sbjct: 286  IKALSNQKYRDLSESFGAENVGLMTGDVTLHPNASIMVMTTEILRSMLYRGSHLVNELKW 345

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            +IFDEIHYM+DRERGVVWEESI+ +P  ++ VFLSAT+ NA +FAEW+  +  QPCHV+Y
Sbjct: 346  LIFDEIHYMRDRERGVVWEESIVLVPSTMRFVFLSATIPNAREFAEWVATIKHQPCHVLY 405

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDTFLKQKIGGRRENGKA 301
            TD+RPTPLQHY+FP GG G+YLV+DEK+ FREDNF      L  T  +Q +  ++  G+ 
Sbjct: 406  TDYRPTPLQHYMFPAGGEGVYLVMDEKKVFREDNFHTAVATLHKTVEEQAMETKQRRGRG 465

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM---------SKL 352
              R +          I K++ M   R++ PVI+F FS+RECE +A ++           +
Sbjct: 466  RNRSS----------IEKLILMCHSRQYTPVIIFCFSKRECEANATALLGSGSRNAGGNV 515

Query: 353  DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
            D  T+EEK  +E++F NA++ L EEDR+LP ++ +LPLLKRGI +HH GLLP +KE++E+
Sbjct: 516  DLTTEEEKQLIEEIFNNALETLEEEDRHLPQVKSILPLLKRGIGIHHGGLLPFVKEMIEI 575

Query: 413  LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
            LFQE L++ LF+TETF+MG+NMPAKTV+FTA++K+DG  +R + SGEYIQM+GRAGRRG 
Sbjct: 576  LFQESLLRVLFSTETFSMGVNMPAKTVIFTAIRKYDGQEYRIVNSGEYIQMAGRAGRRGL 635

Query: 473  DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
            DDRGI IIM DEQ++    K + +G+ APL+STF L +  +LNL  R E    A  +I  
Sbjct: 636  DDRGIVIIMFDEQVDPEEAKQLFMGQGAPLISTFHLGFNMLLNLF-RIEDANPA-FMISR 693

Query: 533  SFHQFQYEK-----------------------ALPDIGKKVSKLEEEAASLDASGEAEVA 569
            SF  FQ  +                       AL D+ K       +  S D   EA V 
Sbjct: 694  SFAHFQRNRKALHLEKEKEELEEEVKKVKDIHALADVDKA------DRPSFDV--EAAVR 745

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK-VREGGTDWGWGVVVNVVKK--- 625
            EY++LK D++ L K+L     + + +L YL +GR+++ V E GTDWGW   ++ + K   
Sbjct: 746  EYYELKHDLSGLGKELRDLAMQEKYILRYLQAGRIVRLVDESGTDWGWATCLSKISKRCV 805

Query: 626  PSAG---------------VGTLP-------------------------SRGGGY----- 640
            PS                 V   P                         S  GG      
Sbjct: 806  PSTNAVRDGPTEQLVVDCLVACTPESIRETHGQGATGAVAASEKPQPAKSVNGGVEKKDY 865

Query: 641  ---IVPVQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELESRF-PQ-GLPKLNPV 693
               +V   +  I ++SK R+++P   D+R  DAR+S+   ++++E RF P+ G+P L+P+
Sbjct: 866  VLAVVSFTISCIRSISKCRMTLPVGVDVRSEDARRSLHFQLKKVEKRFEPEGGIPLLDPI 925

Query: 694  KDMKIEDPEVVDLVNQIEELEHK-----LFAHPLNKSQDENQIRCFQRKAEVNHEIQQLK 748
            ++MKI +P + +LV  I E E +     L+ HPL  +             + +H   QL+
Sbjct: 926  QEMKIPEPRLPELVAAIAEKEKRLTQNPLYEHPLCGTY-----------YDAHHRRVQLQ 974

Query: 749  SKMR------DSQIQ-KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            +K+R      DSQ Q   +D L+   RVL++L  +DA+ VV +KGR AC I T DEL+  
Sbjct: 975  TKLRILRESLDSQKQLVMKDTLRAMRRVLRQLDFLDANDVVTVKGRVACEITTADELVAA 1034

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+F   F  ++   + AL SC +  +K  E       L   L++++E A+ IA +  E 
Sbjct: 1035 ELLFQNVFETMEVEAICALLSCLVFQEKHDEPEPKEEVLLTCLEKVKEVAKNIAAVCVES 1094

Query: 862  K-------------------LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            +                       VD+YV +  +  +M + Y W+KG  FA+V+  T I+
Sbjct: 1095 RYIDPVGSSATKPSENSASPCTQTVDDYV-NKFQHAIMSLTYRWAKGEKFADVLSGTSIY 1153

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EG++IR  RRL+E + Q+  A++++G  +LEKKF    + +RRGI+FS+SLYL
Sbjct: 1154 EGTVIRCLRRLEELMRQMACASKSIGNPDLEKKFLEGIKKIRRGIVFSSSLYL 1206


>gi|399216377|emb|CCF73065.1| unnamed protein product [Babesia microti strain RI]
          Length = 988

 Score =  762 bits (1968), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/955 (42%), Positives = 586/955 (61%), Gaps = 85/955 (8%)

Query: 63  PVYNGEM---AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
           P+++ E    AK Y F+LD FQ  S+ CLE N+SVLV+AHTSAGKT VAEYAIAM    K
Sbjct: 57  PIFDPEYIPQAKQYKFKLDEFQLRSIQCLENNQSVLVAAHTSAGKTVVAEYAIAMGILYK 116

Query: 120 QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
            RVIYTSP+KALSNQKYR+L  EFKDVGLMTGD+TL+P AS +VMTTEILR MLYRG+E+
Sbjct: 117 HRVIYTSPIKALSNQKYRDLSDEFKDVGLMTGDITLNPTASVMVMTTEILRSMLYRGNEL 176

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           ++E+ +VIFDEIHYM+DRERGVVWEE+II LP  +  VFLSAT+SN T+FAEWIC +  Q
Sbjct: 177 IQEMKYVIFDEIHYMRDRERGVVWEETIIMLPDTVTFVFLSATLSNTTEFAEWICRIKHQ 236

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
           PCHV+YTDFRPTPLQHY+FP  G G+++++DE + F++  F +   T      G  R+  
Sbjct: 237 PCHVIYTDFRPTPLQHYIFPANGDGIFMILDEHKNFKQQAFYQALATLRPSSSGIDRKQM 296

Query: 300 KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
           ++              DI KIV M   RK+ P+I+F FS+ ECE +A  + +LD  ++ E
Sbjct: 297 RS----------RANPDIAKIVTMCENRKYTPIIIFCFSKNECEANATFLKQLDITSESE 346

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           K  +E++FQNA+  L ++DR LP    +LP+LKRGI +HH GLLP+IKE++E+LFQE L+
Sbjct: 347 KSMIEEIFQNAMATLADDDRKLPQAVSILPMLKRGIGIHHGGLLPIIKEVIEILFQESLI 406

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           + LF+TETF+MG+NMPAKTVVFT +KKWDG +HR I SGEYIQM+GRAGRRG DDRG+ I
Sbjct: 407 RVLFSTETFSMGINMPAKTVVFTGLKKWDGQTHRIITSGEYIQMAGRAGRRGLDDRGLVI 466

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           +M+DE M++  +K + LG    L S F L Y  +LNL+ R +G  T E++I+ SFHQFQ 
Sbjct: 467 VMIDESMKIEEMKKLFLGDACRLDSKFYLGYNMLLNLI-RNDGT-TPEYMIERSFHQFQM 524

Query: 540 EKA-----------------LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLE 582
           +KA                 + ++ K  +  EEE  + D +  AEVA Y+ ++ +IA L 
Sbjct: 525 DKATIQMKEQLELSSKKTQEMKNVLKMANIPEEEHPNFDVN--AEVANYYLMRHEIASLR 582

Query: 583 KKLMSEITRPERVLYYLGSGRLIKV--REGGTDWGWGV--------------------VV 620
           ++    I+  +++L ++  GRL+K+  +  G +WGWG+                    +V
Sbjct: 583 EEYRMIISESDQILDFINLGRLVKLVDQTTGANWGWGICFGSARIKIKDKRKVYIVDCLV 642

Query: 621 NVVKKPSAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILL-- 674
           +  +    G   +PS         I+P  L  I   S+IR+ +  + R   +   I L  
Sbjct: 643 SCTQTSINGDCPVPSTIATESTFQIIPFTLDCIVEWSQIRMKIDSNFRVSSSTCQIDLRH 702

Query: 675 AVQELESRFP-----QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDEN 729
               +  RF        +P L+P+K + IED  + +++  I +LE K+ A PL   +  +
Sbjct: 703 KFDHILKRFRGNDELHEMPLLDPIKHIGIEDRRLCEIIAAIGDLEKKISASPLIGFKYLD 762

Query: 730 QIRCFQRKAEVNHEIQQLKSKMRDSQIQK---------FRDELKNRSRVLKKLGHIDADG 780
            +          + ++ +K K R+++++K            ELK    VL  L +I ++G
Sbjct: 763 IV--------YKNYLEYIKLKDRENELKKEFVLHNRLVLSQELKAMKGVLVDLSYISSEG 814

Query: 781 VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
           +V  KGR AC I+  DE++VTEL+F+  F  ++   + A  SC +  +K+        +L
Sbjct: 815 IVTYKGRFACEINASDEIIVTELLFSNFFEGMEPDYICAYLSCLVHDEKNEVHSVNDQKL 874

Query: 841 AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
           A    ++QE    +  +  + K+E+ V+ YV +  RP LM ++  W++G +F +++  + 
Sbjct: 875 ADGFAKIQEIVSNVGNVMVKNKIEITVENYV-AKYRPSLMMIVLRWARGESFTDILANSS 933

Query: 901 IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +EGS+IRS RRLDE L QL  A +++    +E+ F  A   ++RGI FS+SLYL
Sbjct: 934 EYEGSVIRSFRRLDELLRQLACACRSIDNSTMEQNFLNAMTKMKRGIAFSSSLYL 988


>gi|221504905|gb|EEE30570.1| RNA helicase, putative [Toxoplasma gondii VEG]
          Length = 1206

 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/1013 (42%), Positives = 608/1013 (60%), Gaps = 157/1013 (15%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A+ Y F LD FQ+ SV CLE  ESVLV+AHTSAGKT VAEYAIAM+ RDKQRV+YTSP
Sbjct: 226  EPARQYKFRLDAFQQRSVLCLEAGESVLVAAHTSAGKTVVAEYAIAMSIRDKQRVVYTSP 285

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQKYR+L + F  ++VGLMTGDVTL PNAS +VMTTEILR MLYRGS ++ E+ W
Sbjct: 286  IKALSNQKYRDLSESFGAENVGLMTGDVTLHPNASIMVMTTEILRSMLYRGSHLVNELKW 345

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            +IFDEIHYM+DRERGVVWEESI+ +P  ++ VFLSAT+ NA +FAEW+  +  QPCHV+Y
Sbjct: 346  LIFDEIHYMRDRERGVVWEESIVLVPSTMRFVFLSATIPNAREFAEWVATIKHQPCHVLY 405

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDTFLKQKIGGRRENGKA 301
            TD+RPTPLQHY+FP GG G+YLV+DEK+ FREDNF      L  T  +Q +  ++  G+ 
Sbjct: 406  TDYRPTPLQHYMFPAGGEGVYLVMDEKKVFREDNFHTAVATLHKTVEEQAMETKQRRGRG 465

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM---------SKL 352
              R +          I K++ M   R++ PVI+F FS+RECE +A ++           +
Sbjct: 466  RNRSS----------IEKLILMCHSRQYTPVIIFCFSKRECEANATALLGSGSRNAGGNV 515

Query: 353  DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
            D  T+EEK  +E++F NA++ L EEDR+LP ++ +LPLLKRGI +HH GLLP +KE++E+
Sbjct: 516  DLTTEEEKQLIEEIFNNALETLEEEDRHLPQVKSILPLLKRGIGIHHGGLLPFVKEMIEI 575

Query: 413  LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
            LFQE L++ LF+TETF+MG+NMPAKTV+FTA++K+DG  +R + SGEYIQM+GRAGRRG 
Sbjct: 576  LFQESLLRVLFSTETFSMGVNMPAKTVIFTAIRKYDGQEYRIVNSGEYIQMAGRAGRRGL 635

Query: 473  DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
            DDRGI IIM DEQ++    K + +G+ APL+STF L +  +LNL  R E    A  +I  
Sbjct: 636  DDRGIVIIMFDEQVDPEEAKQLFMGQGAPLISTFHLGFNMLLNLF-RIEDANPA-FMISR 693

Query: 533  SFHQFQYEK-----------------------ALPDIGKKVSKLEEEAASLDASGEAEVA 569
            SF  FQ  +                       AL D+ K       +  S D   EA V 
Sbjct: 694  SFAHFQRNRKALHLEKEKEELEEEVKKVKDIHALADVDKA------DRPSFDV--EAAVR 745

Query: 570  EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIK-VREGGTDWGWGVVVNVVKK--- 625
            EY++LK D++ L K+L     + + +L YL +GR+++ V E GTDWGW   ++ + K   
Sbjct: 746  EYYELKHDLSGLGKELRDLAMQEKYILRYLQAGRIVRLVDESGTDWGWATCLSKISKRCV 805

Query: 626  PSAG---------------VGTLP-------------------------SRGGGY----- 640
            PS                 V   P                         S  GG      
Sbjct: 806  PSTNAVRDGPTEQLVVDCLVACTPESIRETHGQGATGAVAASEKPQPAKSVNGGVEKKDY 865

Query: 641  ---IVPVQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELESRF-PQ-GLPKLNPV 693
               +V   +  I ++SK R+++P   D+R  DAR+S+   ++++E RF P+ G+P L+P+
Sbjct: 866  VLAVVSFTISCIRSISKCRMTLPVGVDVRSEDARRSLHFQLKKVEKRFEPEGGIPLLDPI 925

Query: 694  KDMKIEDPEVVDLVNQIEELEHK-----LFAHPLNKSQDENQIRCFQRKAEVNHEIQQLK 748
            ++MKI +P + +LV  I E E +     L+ HPL  +             + +H   QL+
Sbjct: 926  QEMKIPEPRLPELVAAIAEKEKRLTQNPLYEHPLCGTY-----------YDAHHRRVQLQ 974

Query: 749  SKMR------DSQIQ-KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            +K+R      DSQ Q   +D L+   RVL++L  +DA+ VV +KGR AC I T DEL+  
Sbjct: 975  TKLRILRESLDSQKQLVMKDTLRAMRRVLRQLDFLDANDVVTVKGRVACEITTADELVAA 1034

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+F   F  ++   + AL SC +  +K  E       L   L++++E A+ IA +  E 
Sbjct: 1035 ELLFQNVFETMEVEAICALLSCLVFQEKHDEPEPKEEVLLTCLEKVKEVAKNIAAVCVES 1094

Query: 862  K-------------------LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            +                       VD+YV +  +  +M + Y W+KG  FA+V+  T I+
Sbjct: 1095 RYIDPVGSSATKPSENSASPCTQTVDDYV-NKFQHAIMSLTYRWAKGEKFADVLSGTSIY 1153

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            EG++IR  RRL+E + Q+  A++++G  +LEKKF    + +RRGI+FS+SLYL
Sbjct: 1154 EGTVIRCLRRLEELMRQMACASKSIGNPDLEKKFLEGIKKIRRGIVFSSSLYL 1206


>gi|255073223|ref|XP_002500286.1| predicted protein [Micromonas sp. RCC299]
 gi|226515548|gb|ACO61544.1| predicted protein [Micromonas sp. RCC299]
          Length = 1037

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/958 (41%), Positives = 591/958 (61%), Gaps = 58/958 (6%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C+H+V  P G+A   +  ++    NP      AK Y F LD FQ+ SV  +E+ ESV+V+
Sbjct: 98   CLHDVVRPPGWAPDPNARVYDE-KNP------AKVYPFRLDTFQQKSVEVMEQGESVMVA 150

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT VAEYAIAMA RD QRV+YTSPLKALSNQK+REL  EF DVGLMTGD  ++ 
Sbjct: 151  AHTSAGKTVVAEYAIAMALRDGQRVVYTSPLKALSNQKFRELKDEFGDVGLMTGDTVINE 210

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             ASCLVMTTE+LR MLYRG EV++EV WVIFDEIHYM+D ERGVVWEE++ FLP A++ V
Sbjct: 211  TASCLVMTTEVLRSMLYRGGEVMREVGWVIFDEIHYMRDFERGVVWEETVHFLPDAVRYV 270

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA +FAEWI   H  PCH+VYTD+RPTPL+HY+FP GG G+YL  D   +FR+
Sbjct: 271  FLSATIPNAKEFAEWIVKTHSHPCHLVYTDYRPTPLEHYIFPKGGDGIYLSFDRDNKFRQ 330

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
            DNF+K  +       GG  +      +           +++KIVKMI ++ + P IVF+F
Sbjct: 331  DNFLKAINAIAPASDGGDGKGKGEEMKHL---------EVYKIVKMIADKNYDPCIVFTF 381

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
             ++  E+ A ++ +LD N+  EK  ++ +F+ ++  L+ ED+NLP +  +LP++KRGI  
Sbjct: 382  DKKMIEEQAKALDRLDLNSDTEKSMIDAIFEASIAQLSPEDQNLPQVVKILPMVKRGIGF 441

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD--SHRYI 455
            HHSGLLPV+KE++E+LFQEGL+K L ATET + GLNMP ++VVFTA +K+DG    +R+I
Sbjct: 442  HHSGLLPVLKEVIEILFQEGLIKVLIATETMSTGLNMPCRSVVFTAPRKYDGAEFGYRWI 501

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             SGEY+QMSGRAGRRG DDRG+ ++M+DE+M+    K M+ G+  PL S FRL Y  +LN
Sbjct: 502  SSGEYVQMSGRAGRRGLDDRGLVVLMMDERMDPQIAKGMLHGRSDPLNSAFRLHYPMLLN 561

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLK 575
            LM R EG    E +IK SF QFQ ++ +P +  K ++L     ++    EA+V EY  L+
Sbjct: 562  LM-RMEGGEECERLIKRSFKQFQTDRDIPKLELKCAQLAAARDAVVVPDEAKVEEYVNLR 620

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP-------SA 628
              ++ L  +    +  P+  L +L  GR +K    G ++   VV+N+ ++P         
Sbjct: 621  DTLSVLRGERRGWLNHPDNALQFLQVGRCVKHERDGAEYLVDVVLNIEEQPHDARRPRKG 680

Query: 629  GVGTLPSRGGGY-----------------------IVPVQLPLISTLSKIRLSVPPDLRP 665
             +G    R   +                       +V V L  + +LS +R+  P +L  
Sbjct: 681  NLGRFRVRPMNWDGKAPLEGEEDEWTGASRDLEPRVVQVPLSQVDSLSSVRIYTPKELVS 740

Query: 666  LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
            +++R  +  A+ E+  RFP G+P L+P  DMKI+      L  +IE LE     HPL+ S
Sbjct: 741  IESRMRVQRAMNEVVKRFPDGVPMLDPESDMKIDQDNFRKLKRRIEALEAMTTRHPLHGS 800

Query: 726  QD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             D E++++ F R+ E+    +  K  ++ +Q    +D+L+   RVL++L H + DGVV +
Sbjct: 801  PDLEDKVKLFARRRELGLRHKVAKRALKAAQGMIHKDDLRYMQRVLRRLNHTNEDGVVAM 860

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQ----VAALASCFIPVDKSSEQINLRMEL 840
            KG+ AC I + D L+ TEL+F+G F +L        VAAL        K  + I +  E 
Sbjct: 861  KGQVACEITSADALVTTELVFDGLFKELSLEMCVAVVAALTERVGTAGKDPKDIKMSEEC 920

Query: 841  AKPLQQLQESARKIAEIQNECK-LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
                ++++ +A+ + +  +ECK L+ +V++++ S  RP +M++   W+KG  F   +++ 
Sbjct: 921  KDAYERVRIAAQSVGKQMSECKVLDTSVNDFMNS-FRPEMMELCREWAKGTKFETCMKVA 979

Query: 900  --DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               ++EGS++RS RR++E L QL+ A   +G+  L  KF      ++R I+F++SL+L
Sbjct: 980  PRGMYEGSVVRSIRRINEVLWQLKGAMAIIGDTGLRDKFEECQNLVKRDIVFADSLFL 1037


>gi|300121453|emb|CBK21972.2| unnamed protein product [Blastocystis hominis]
          Length = 865

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/880 (43%), Positives = 571/880 (64%), Gaps = 53/880 (6%)

Query: 114 MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGML 173
           M+ RD QRVIYTSP+KALSNQKYR+L QEF DVGLMTGDVT+SPNAS LVMTTEILR ML
Sbjct: 1   MSLRDHQRVIYTSPIKALSNQKYRDLEQEFSDVGLMTGDVTISPNASVLVMTTEILRSML 60

Query: 174 YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
           Y+GS++L+EVAWVI+DEIHYM+D+ERGVVWEESII LP +++ VFLSAT+ NA  FA WI
Sbjct: 61  YKGSDILREVAWVIYDEIHYMRDKERGVVWEESIILLPDSVRFVFLSATIPNARDFAGWI 120

Query: 234 CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG 293
             +H Q  +VVYT++RP PLQHY++P GG GL+LV+D+K QFRE NF K         + 
Sbjct: 121 AQIHNQKVNVVYTEYRPVPLQHYLYPTGGDGLFLVIDDKGQFREQNFAK--------ALA 172

Query: 294 GRRENGKASGRM--AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
           G+  +   S  +   K  +     ++ +IV  +MER   P+IVFSFS+++CE +A+ ++K
Sbjct: 173 GQGLSTLESQVLEDKKKKTKKPTEELQRIVSTVMERNLDPLIVFSFSKKDCETYALLLAK 232

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           LDF + +EK  ++++++NA+  L+ +DRNLP ++ +LPLL RG+ +HH GLLP+IKE +E
Sbjct: 233 LDFTSADEKKLIQEIYKNAISSLSVDDRNLPQVKSVLPLLTRGVGIHHGGLLPIIKETIE 292

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           +LFQEGL+K LFATETFAMG+NMPAKT +FT+++K+DG+++R I  GEYIQMSGRAGRR 
Sbjct: 293 ILFQEGLLKILFATETFAMGINMPAKTCIFTSLRKFDGETYRMITPGEYIQMSGRAGRRN 352

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
           KD++GI I +VDE  + + +K ++ GK  PL S+F L Y  +LNL+ R E     E++I 
Sbjct: 353 KDNKGIVIQIVDEAGKADEIKHILTGKADPLFSSFHLGYNMLLNLL-RVENA-NPEYMIT 410

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            SF+Q+Q +   P I  +  +L  E  S+    E  V+   K++    ++E+++ +    
Sbjct: 411 RSFYQYQNQLDAPKIRAECEQLRYEIDSISIENEKLVSTVAKMRDACEKVEEQMRAIAIT 470

Query: 592 PERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT------------------- 632
           P+ VL +L +GRL+++R+   D+GWGV+V   K  +   G+                   
Sbjct: 471 PKYVLPFLQNGRLVRIRDRANDFGWGVIVGFSKNKNFEEGSATSSVETKYIVDAILYCSE 530

Query: 633 -------LPSRGGGY----IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
                  +P   G      +V + L  + +LS +R+ +P DLRP+  R ++   ++E+ S
Sbjct: 531 RSTLASLIPPESGKTPTMQVVSLYLSCVMSLSSLRIFMPKDLRPVSNRTTVANTLREVLS 590

Query: 682 RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ------IRCFQ 735
           R+    P L+P KD+KI D    +  ++++E   ++       S D ++      +  F 
Sbjct: 591 RYNGAPPTLDPYKDLKIAD----ETFSKLDETRKRIMQQLDKLSFDPSEPANAEALAAFA 646

Query: 736 RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
           RK E+   +   +  + +S      + L    RVL++LG+ID   VVQ KGR AC I++ 
Sbjct: 647 RKTELTRTLSLREKDLSNSSALVLSETLGKMKRVLRRLGYIDEMDVVQAKGRIACEINSA 706

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
           DELL+TEL+++G F +L   Q  A+ +  + ++K+ + I  R E+AKP  +L E+AR++A
Sbjct: 707 DELLLTELIYDGLFIELTPVQCVAILASLVFLEKTDDVIKPRPEMAKPYAKLLETARRVA 766

Query: 856 EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            +  ECKL ++V++YVE   +P +M+++Y W+ GA F ++ +MT IFEG+I R  RRLDE
Sbjct: 767 TVCEECKLPIDVEKYVEQ-FKPVMMEIMYEWASGAKFVDICKMTTIFEGTITRCTRRLDE 825

Query: 916 FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + +++AA  A+G+    +KF   S+ ++R I+F+ SLYL
Sbjct: 826 LIQEVQAAVMAIGDKAQAEKFEMGSKLIKRDIVFAASLYL 865


>gi|429327664|gb|AFZ79424.1| DEAD/DEAH box helicase domain containing protein [Babesia equi]
          Length = 985

 Score =  741 bits (1914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/963 (41%), Positives = 600/963 (62%), Gaps = 74/963 (7%)

Query: 35  TRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
           + +C H    PS Y   ++E    T        +MAK Y F LD FQ+ S+ CLE NESV
Sbjct: 55  SNNCTHHRLYPSDY---QNEWTKIT--------QMAKEYPFTLDDFQKRSIECLENNESV 103

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVT 154
           LV AHTSAGKT VAEYAIAMA RDK R+IYTSP+KALSNQKYR L  EF DVGLMTGDVT
Sbjct: 104 LVCAHTSAGKTVVAEYAIAMALRDKHRIIYTSPIKALSNQKYRNLSDEFNDVGLMTGDVT 163

Query: 155 LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
           L+PNAS +VMTTEILR MLYRGSEV++E+  VIFDE+HYM+D+ERGVVWEE+II +PP++
Sbjct: 164 LNPNASVMVMTTEILRSMLYRGSEVVQEMNCVIFDEVHYMRDQERGVVWEETIILIPPSV 223

Query: 215 KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            +VFLSAT+ N+ +FAEW+C +   PC+V+ TD+RPTPLQHYVF  G SG+YLV+DEK  
Sbjct: 224 NLVFLSATIPNSLEFAEWVCRIKNSPCNVISTDYRPTPLQHYVFSPGRSGVYLVLDEKRN 283

Query: 275 FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
           F+E  F++        + G   ++ K   R AK        DI  ++ M  E++F PVIV
Sbjct: 284 FKETTFMEAV-----CQAGPSDDHKKKRSRNAK--------DIESLIAMCHEKRFTPVIV 330

Query: 335 FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           F+FS+ +CE++A+S+S +D     EK  ++++++NA+  L++EDRNLP    MLPLLK+G
Sbjct: 331 FAFSKTDCEKNAISVSHMDMTDDAEKALIDEIYRNAMATLSDEDRNLPQALFMLPLLKKG 390

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           I +HH GLLP+IKE++E++FQEGL+K LF+TETF+MG+NMPA+TVVFT +KKWDG + R 
Sbjct: 391 IGIHHGGLLPIIKEIIEIIFQEGLLKVLFSTETFSMGVNMPARTVVFTKLKKWDGRNVRL 450

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
           I SGEYIQM+GRAGRRG DDRG+ IIM+++ ++    K + LG+   + STF L Y  +L
Sbjct: 451 ITSGEYIQMAGRAGRRGLDDRGLVIIMLEDTIKPEEAKKIFLGRADNMDSTFHLGYNMLL 510

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYE---KALPDIGKK-VSKLEEEAASLDASGEAEVAE 570
           NLM R E   T E +I+ SF QFQ E   + L    KK +  +++    +D +   E+A 
Sbjct: 511 NLM-RIEDT-TPEFMIERSFLQFQVESRARTLEAARKKLIISIQDAKNKIDQNIFPELAA 568

Query: 571 YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA-- 628
           +H  K ++++L+  +   IT   ++L +L  GRL+K+ +   +W WG+     K  S   
Sbjct: 569 FHLSKRELSKLKDTVSDIITSDPKLLNFLNFGRLVKLVDNDVNWDWGICFASAKLKSKQS 628

Query: 629 ---------------------GVGT-LPSR----GGGYIVPVQLPLISTLSKIRLSVPPD 662
                                G G  LP++    G   +VP  +  +  +S+IR+++  D
Sbjct: 629 KGEKMYVIDCLVLCDRTSVKDGKGIPLPTKDINEGVFTVVPFAVKCVKEISQIRMTIKSD 688

Query: 663 LRPLDARQSILLAVQELESRFPQ---------GLPKLNPVKDMKIEDPEVVDLVNQIEEL 713
            R       +  A  E+ S++ Q          +P L+P++ +K++ P +  L+  I+E 
Sbjct: 689 FR---VNSEVCQA--EMRSKYRQLRDYMSTLVKIPLLDPIEHIKLDSPILDGLLKDIKEK 743

Query: 714 EHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKK 772
           E  + + PL   +D   I   ++    +  E + L+++++ S     +DEL+    VL+ 
Sbjct: 744 EKIVNSSPLTGRKDFLHILSQYEEYVRLQTEERDLEAEIQKSHQIVMKDELRRMKGVLRA 803

Query: 773 LGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSE 832
           L ++D +G+V +KGR AC I+  DEL+V EL     F ++    + A  SC +  ++  E
Sbjct: 804 LNYVDENGIVTIKGRIACEINATDELVVAELFLRNFFENMQPEYICAALSCLVIDERKDE 863

Query: 833 QINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATF 892
            +   ++L +   ++Q+ A  IA +  + +++VN   +V    +P LM V++ W+KG TF
Sbjct: 864 NLPTDLKLLEGFTKIQQVAGDIANVMCDNEMDVNPGAFV-GKFKPSLMTVVWRWAKGDTF 922

Query: 893 AEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNS 952
            +++  + +FEGS+IR  RRL+E L QL  A++ +G +++E+ F      L++GI F++S
Sbjct: 923 TDILSESAVFEGSVIRCIRRLEELLRQLACASRNIGNLSMEQVFITCINKLKKGIAFTSS 982

Query: 953 LYL 955
           LYL
Sbjct: 983 LYL 985


>gi|403222114|dbj|BAM40246.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
          Length = 1023

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 419/993 (42%), Positives = 595/993 (59%), Gaps = 75/993 (7%)

Query: 17   LHVTGTPEEESTKKQR-NLTRSCVHEVAVPS--GYALTKDEAIHGTFANPVYNGEMAKTY 73
            L+ T +P   S K ++ + + +C H    PS   Y+  K E             + AKTY
Sbjct: 52   LNYTTSPLTTSVKVEKIHSSHNCSHYRVAPSDSNYSPRKIE-------------KYAKTY 98

Query: 74   SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
             F LD FQ+ S+  LE NESVLV AHTSAGKT VAEYAIAM  RD  R+IYTSP+KALSN
Sbjct: 99   PFTLDEFQKRSIESLEMNESVLVCAHTSAGKTVVAEYAIAMGLRDGHRIIYTSPIKALSN 158

Query: 134  QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
            QKYR L  EF DVGLMTGDVTL+P AS +VMTTEILR MLYRGSE+++E+  VIFDE+HY
Sbjct: 159  QKYRNLSDEFVDVGLMTGDVTLNPTASVMVMTTEILRSMLYRGSEIVQEMKCVIFDEVHY 218

Query: 194  MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
            M+D ERGVVWEE+II +P  + +VFLSAT+ N  +F+EWI  +   PC+VV TDFRP PL
Sbjct: 219  MRDLERGVVWEETIILIPSQVNLVFLSATIPNYLEFSEWITRIKNVPCNVVSTDFRPVPL 278

Query: 254  QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG 313
             HY++  GG G+YLV+DE   F+  N+ K   +         R+     GR  K GS + 
Sbjct: 279  NHYLYMSGGEGIYLVLDEDNNFKSSNYNKCLASGPSSSASKDRD---TKGRDKKRGS-AA 334

Query: 314  GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
              DI  IVK+  E+   P I+FSFS+ ECE  A S+  LD  T EEK  V+++++NA+  
Sbjct: 335  YRDIESIVKLCFEKSLTPCIIFSFSKSECETLATSVRNLDMTTDEEKKLVDEIYKNAMAT 394

Query: 374  LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
            L+E+DR LP    MLPLLKRGI +HH GLLP+IKE++E+LFQE L+K LF+TETF+MGLN
Sbjct: 395  LSEQDRLLPQNLFMLPLLKRGIGIHHGGLLPIIKEIIEILFQESLLKVLFSTETFSMGLN 454

Query: 434  MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD--EQMEMNTL 491
            MPAKTVVFT++KKWDG   RYI SGEYIQMSGRAGRRG D  G+ IIMVD  + +    +
Sbjct: 455  MPAKTVVFTSLKKWDGREVRYISSGEYIQMSGRAGRRGLDTIGVVIIMVDGNDPLVEQEV 514

Query: 492  KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS 551
            K + LGKP  L STF L Y  +LNLM R E   T E++I+ SF QFQ +    DI  K++
Sbjct: 515  KKIFLGKPLNLDSTFHLGYNMLLNLM-RIEDT-TPEYLIERSFMQFQMKNKSADITSKMN 572

Query: 552  KLEEEAASLDASGEAE-VAEYHKLKLDIAQLE---KKLMSEITRPERVLYYLGSGRLIKV 607
            + +     L  S  +E + +   L  +IA+LE   + ++  + +  + L Y   GRL+ V
Sbjct: 573  EAKANMEDLRNSFNSELLVQMSSLHDNIARLEELDELIIKMVMKDAKALNYFNLGRLVYV 632

Query: 608  REGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ---------------------- 645
            ++   DWGWG+ V+  K  +    T  +     ++PV+                      
Sbjct: 633  KD-DQDWGWGLCVSSPKLRAPKYKTTKTYHVDIVLPVKREGDKVMPSHVAEATYTIKSFG 691

Query: 646  LPLISTLSKIRLSVPPDLRPLD-ARQSILLAVQELESRFPQGL---PKLNPVKDMKIEDP 701
            +  +  +S+IR+++   +   D A QS +     L     + +   P L+PV+ MKI++P
Sbjct: 692  IDCVKKMSQIRVTINEKVDKSDTAFQSSMYQKFSLLFEHIKKVKEPPLLDPVEHMKIDNP 751

Query: 702  EV------------------VDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNH 742
            E+                   D++   +EL  ++ + PL   +D + I + ++   +V  
Sbjct: 752  ELESNLSYASMYTLHKSLEGKDVILVSKELRSQIDSSPLLSREDYDTILKKYEDYVKVKE 811

Query: 743  EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
            E ++ + K+++      +DEL++   VL+KL ++D  G+V +KGR AC I+  DELLV E
Sbjct: 812  EFEEHQKKLQECTQIIMKDELRHMKTVLRKLEYVDQFGIVTIKGRIACEINASDELLVAE 871

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L     F  ++  Q+ A  SC +  D+   ++   ++L +   +++E A +I E+  EC 
Sbjct: 872  LFLRNFFEKMEPEQICASLSCLVNDDRKEAKLPTELKLLESYNKIREIATEIVEVMVECD 931

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            + V+  EYV + +RP LM V+Y W+KG  F E++  + +FEGS+IR  RRLDE L QL  
Sbjct: 932  ILVDEVEYV-NKLRPTLMSVVYRWAKGDPFIEILSDSSVFEGSVIRCIRRLDELLRQLAC 990

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A++ +G + +E+ F      L++GI F++SLYL
Sbjct: 991  ASRNIGNITMEEIFLTCISKLKKGIAFTSSLYL 1023


>gi|296423663|ref|XP_002841373.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295637610|emb|CAZ85564.1| unnamed protein product [Tuber melanosporum]
          Length = 1289

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/844 (45%), Positives = 524/844 (62%), Gaps = 81/844 (9%)

Query: 20  TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDP 79
           +G   +++  K   +     H+V++P+ Y        +    N ++    A+ Y F LDP
Sbjct: 112 SGLTSQDTEGKSIIIPHQVRHQVSLPTDYQ-------YKPIENHIFVEPPARAYGFTLDP 164

Query: 80  FQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL 139
           FQ+ SVA +ER ESVLVSAHTSAGKT VAEYAIA + RD QRVIYTSP+KALSNQKYRE 
Sbjct: 165 FQKTSVAAIERGESVLVSAHTSAGKTVVAEYAIAQSLRDNQRVIYTSPIKALSNQKYREF 224

Query: 140 HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRER 199
             EF DVGLMTGD T++PNA+CLVMTTEILR MLYRGSEV++EV WV+FDEIHYM+D+ R
Sbjct: 225 SAEFGDVGLMTGDTTINPNATCLVMTTEILRSMLYRGSEVMREVQWVVFDEIHYMRDKAR 284

Query: 200 GVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFP 259
           GVVWEE+II LP  ++ VFLSAT+ NA QFAEWIC  H QPCHVVYTDFRPTPLQ Y+FP
Sbjct: 285 GVVWEETIILLPDKVRYVFLSATIPNAMQFAEWICKTHNQPCHVVYTDFRPTPLQTYLFP 344

Query: 260 VGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFK 319
            G  G             DN                   G  +GR  +G SG   SDI+K
Sbjct: 345 AGADG-------------DN------------------PGDINGRKGRGRSGP--SDIYK 371

Query: 320 IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
           IVKMIM + + PVIVF FS+RECE  A+ MS L FN   EK+ V +VF NA+  L+EEDR
Sbjct: 372 IVKMIMIKNYNPVIVFCFSKRECESLALQMSSLAFNDDAEKEMVGKVFGNAISSLSEEDR 431

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
            L  I+ +LPLL+RGI +HHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTV
Sbjct: 432 GLSQIQHVLPLLRRGIGIHHSGLLPILKEVIEILFQEGLIKVLFATETFSIGLNMPAKTV 491

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKP 499
           VFT V+K+DG   R++   E++QMSGRAGRRG DDRGI I+M+D+ +E    +++V G+ 
Sbjct: 492 VFTNVRKFDGKEQRWVSPSEFVQMSGRAGRRGLDDRGIVILMLDQTLEPAIAREIVKGEQ 551

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
             L S F L Y  ILNLM R EG  + E++++  F QFQ       + K++S+LE E  +
Sbjct: 552 DRLNSAFYLGYNMILNLM-RVEG-ISPEYMLEKCFFQFQNHAGAAGLEKELSELETEKIN 609

Query: 560 LDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV 619
                E  V EYH L+  +    K++   I  P   L ++  GRL+KV+    D+GWG V
Sbjct: 610 TVIEDEPTVREYHDLRQKLDGYTKEMREVINHPNYCLQFMQPGRLVKVKYLNYDFGWGAV 669

Query: 620 VNVVKKPSAGVG-----------------------------TLPS---------RGGGYI 641
           VN  K+  +  G                              LP+          G   +
Sbjct: 670 VNYTKRLRSRSGEEFSPQESYIVDVLLNIASDTSSFTRPGQELPTGVRPPSEGDNGKMEV 729

Query: 642 VPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
           VP+ L  ++++S +R+ +P D++  + R S    + E++ RF  G+  L+P+++M I D 
Sbjct: 730 VPILLSCLASISGLRIFLPKDMKSQEQRNSARKNLDEVKRRFADGISVLDPIENMGIIDD 789

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
              +L+ +IE LE +L ++PL+ S     +   +  K E+  +I+ ++ ++  +      
Sbjct: 790 SFKNLLRKIEVLESRLLSNPLHNSPRLKVLYNLYNHKVELQEKIKAVRKRINLAHSVMQL 849

Query: 761 DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
           +ELK R R+L++LG ID    +QLK R AC I +GDELL++EL+FN  FN+L   Q AAL
Sbjct: 850 EELKYRKRLLRRLGFIDELDTIQLKARVACEISSGDELLISELLFNRVFNELSPEQTAAL 909

Query: 821 ASCF 824
            SCF
Sbjct: 910 LSCF 913


>gi|156085204|ref|XP_001610085.1| DSHCT (NUC185) domain containing DEAD/DEAH box helicase family
           protein [Babesia bovis]
 gi|154797337|gb|EDO06517.1| DSHCT (NUC185) domain containing DEAD/DEAH box helicase family
           protein [Babesia bovis]
          Length = 986

 Score =  734 bits (1895), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/978 (41%), Positives = 597/978 (61%), Gaps = 61/978 (6%)

Query: 20  TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYN-GEMAKTYSFELD 78
           T  P    T + R L    V E  +P+G   +       T+  P Y  GE A++Y F LD
Sbjct: 28  TTAPALVGTSEHR-LASQVVQE-RLPAGKNCSHHRLRPVTYETPPYEPGEPARSYPFTLD 85

Query: 79  PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
            FQ+ S+ CLE+ ESVLV AHTSAGKT VAEYAIAM  RDK+R+IYTSP+KALSNQKYR 
Sbjct: 86  DFQKRSIECLEKGESVLVCAHTSAGKTVVAEYAIAMGLRDKRRIIYTSPIKALSNQKYRN 145

Query: 139 LHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
           L  EF DVGLMTGDVTL+P+AS +VMTTEILR MLYRGSE+++E+ WVIFDE+HYM+D E
Sbjct: 146 LCDEFVDVGLMTGDVTLNPDASVMVMTTEILRSMLYRGSEIVQEMKWVIFDEVHYMRDAE 205

Query: 199 RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
           RGVVWEE+II +P  + +VFLSAT+ N+ +FAEWIC +   PC+V+ TD+RPTPLQHY++
Sbjct: 206 RGVVWEETIILIPQKVNLVFLSATIPNSIEFAEWICRIKNMPCNVIATDYRPTPLQHYIY 265

Query: 259 PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIF 318
               +G+ LV+D+  +FR+D F     T +     GRR+  + +             +I 
Sbjct: 266 TQKLNGINLVLDDSGRFRQDAFNNAMKT-IDNIEEGRRKRVRNT------------KEIE 312

Query: 319 KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEED 378
           +++ M  E+KF P IVF+FS+ ECE +A  +  LD   + EK  + +++QNA+  L ++D
Sbjct: 313 EVITMCHEKKFTPAIVFAFSKSECEANATVLKSLDMTDEAEKTLITEIYQNAMATLADDD 372

Query: 379 RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
           R LP    MLPLL+RGI +HH GLLP+IKE++E+LFQEGL+K LF+TETF+MG+NMPA+ 
Sbjct: 373 RKLPQTVFMLPLLRRGIGIHHGGLLPIIKEIIEILFQEGLIKVLFSTETFSMGVNMPARC 432

Query: 439 VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGK 498
           VVFT + KWDG ++R I SGEYIQM+GRAGRRG D+ G+ IIM+D  ++    K + +GK
Sbjct: 433 VVFTNLSKWDGQTNRLITSGEYIQMAGRAGRRGLDEHGLVIIMMDRGIKPEEAKAIFMGK 492

Query: 499 PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV----SKLE 554
              L S+F L Y  +LNLM R E   T E +I+ SF QFQ +K      +++     +++
Sbjct: 493 ANRLDSSFHLGYNMLLNLM-RIENT-TPEFLIERSFLQFQRDKHSRKFQEQLIEVRREID 550

Query: 555 EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
           E+ + L      E+   + L+ ++AQ++  +   + +  R+L +L  GRL+++   G  W
Sbjct: 551 EKRSMLKNEDLVELTRLYTLRKELAQVKDAISQAVAKDLRMLNFLNFGRLVRLERDGQTW 610

Query: 615 GWGVV-----------------VNVV-------KKPSAGVGT---LPS----RGGGYIVP 643
            WGVV                 V +V       +   +G  T   LP+    +G   +VP
Sbjct: 611 EWGVVFATPQLKIRRSSYDKERVYIVDCLVLCDRDSVSGNRTHEPLPTTNINQGIFVVVP 670

Query: 644 VQLPLISTLSKIRLSVPPDLR-PLDARQSILLA----VQELESRFPQGLPKLNPVKDMKI 698
             +  +  +++IR+ V  D R   D  QS + A    + +     PQ LP L+PV+ +KI
Sbjct: 671 FAIDCVKEIAQIRMKVQEDFRVNSDLCQSTMRAKYAQLMDHMKTLPQ-LPVLDPVEHIKI 729

Query: 699 EDPEVVDLVNQIEELEHKL-FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQ 757
           + PE+  L+ + ++LE ++  +  +   + E +   F   AE   + + + + +  S   
Sbjct: 730 DTPEMKGLLEKYKQLESEIDNSRIVLTGEYEQKYEVFMEYAEAQTKERNILANIEVSHQI 789

Query: 758 KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
             +D+LK+   VL+ L ++D +G+V LKG  AC I+  DEL+V E+     F DL+   +
Sbjct: 790 VMKDDLKHMKGVLRDLNYVDENGIVTLKGSIACEINATDELVVAEMFLRNFFEDLEPEYI 849

Query: 818 AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            A  SC +  DK  E++    +L +    + + A+ IA +    +L+V VD++V +  +P
Sbjct: 850 CAALSCLVVDDKKGEKLPKDQKLLEAYNSILQIAKDIATVMVANRLDVRVDDFV-NKFKP 908

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            +M V+  W+ G +FAEV+Q + +FEGS+IR  RRL+E L QL   ++++G + +E+KF 
Sbjct: 909 AMMTVVLKWANGLSFAEVMQESTLFEGSVIRGVRRLEELLRQLACTSRSIGNLQMEQKFV 968

Query: 938 AASESLRRGIMFSNSLYL 955
                L++GI+F++SLYL
Sbjct: 969 TCINKLKKGIIFTSSLYL 986


>gi|342184386|emb|CCC93868.1| putative ATP-dependent DEAD/H RNA helicase [Trypanosoma congolense
           IL3000]
          Length = 951

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/935 (42%), Positives = 582/935 (62%), Gaps = 56/935 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A ++K+RVIYTSP+K
Sbjct: 24  AMTFPYELDTFQKDSIEALENGDSVLVSAHTSAGKTTVALYAIAKALQEKKRVIYTSPIK 83

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F+ VGLMTGD+T+  ++ CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 84  ALSNQKFREFTEKFESVGLMTGDITIKVDSDCLVMTTEILRSMLYRGTEMLREVGCVVFD 143

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK-QPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++TD+
Sbjct: 144 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVESIHPGTKVHVIHTDY 203

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL HYV+P G  G++L+VDE  +FREDNF +   + +    GG   NG  SGR A  
Sbjct: 204 RPVPLHHYVYPCGADGIFLIVDEHGKFREDNFKRAMAS-VGAANGGSEANGGESGRSAPL 262

Query: 309 GSGS------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             G           I +I+K++M R   P+IVFSF++ ECE++A+++SKL+FN  EE   
Sbjct: 263 VRGKQKAMRKSTEPIMEIIKLVMNRNMYPIIVFSFAKAECERNALALSKLNFNNTEEDTL 322

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           V+ VF NA+ CL  EDR LPAIE +LPLL+RG+ +HHSGLLP++KE+VE+LFQ GLVK L
Sbjct: 323 VKDVFNNAMQCLAVEDRKLPAIEHLLPLLRRGVGIHHSGLLPILKEVVEILFQAGLVKVL 382

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           F+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG D  G+ I MV
Sbjct: 383 FSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRGLDRVGVVIAMV 442

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE +E   LK +  G    L S+F L+Y  +LNL+ R E     E +++ SF QFQ  + 
Sbjct: 443 DEAVEPEILKQVTGGGADVLNSSFHLTYNMVLNLL-RVE-DVDPEFMMRRSFAQFQRMRN 500

Query: 543 LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR-PERVLYYLGS 601
            P + +K  +L +E +S+    E    +Y   + +I   ++KLM +I + P  V  +  +
Sbjct: 501 RPALERKAEELSKEISSIQIEHEDMFRQYTHCQ-EILTNKRKLMGDILKQPIYVKRFAHA 559

Query: 602 GRLIKVREG--GTDWGWGVVVN--------VVKKPSAGVGTL--------PSR------- 636
           GRL+++     GT +GWG+  +        V+  PSA V  +        PS+       
Sbjct: 560 GRLLRIHRSSDGTPFGWGICRSFRAKNSGAVLSDPSAFVADVSIICRKADPSQPALLVPC 619

Query: 637 ---------GGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL 687
                       Y VP     I  +S+ R+S+P D      R  ++  + +L  ++   +
Sbjct: 620 HVKDYTTNTADLYTVPFDFTDIDAISRFRVSLPADPDTESGRAQVVQTLAKLYRQYGDDV 679

Query: 688 PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD---ENQIRCFQRKAEVNHEI 744
           P L   ++M I+DP+   L  Q+E +E ++  + L ++     E     F+++AE+  E+
Sbjct: 680 PLLT-CEEMGIDDPQYSKLRLQVERIEAQVKENELVRNPTASLEADYESFKKRAELEKEL 738

Query: 745 QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVTE 802
             ++ ++  +    F +ELK   RVL++L +ID D +V  K R AC I T D  E+L+TE
Sbjct: 739 AVVEQELNQASQAIFSEELKKMMRVLRRLDYIDKDNIVLRKARVACEITTSDENEILLTE 798

Query: 803 LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
           L+F G  N ++   + AL SC + V ++ +  +L  E  +PL  L E   +IA +  E  
Sbjct: 799 LLFKGVLNSMETEMIVALMSCLVNVHRTPDGFSLPEEFRQPLNDLNEIVNRIATLTIESG 858

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           +    +  VE T+ P LM+V Y W+KGA FA+++  T+ +EG I+R  RRL+E L Q+  
Sbjct: 859 I-TQENTSVEKTM-PSLMEVTYLWAKGAKFADIVSKTNAYEGEIVRMMRRLEEQLRQMAG 916

Query: 923 AAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           AA+  A+G + L  KF    + ++R I+F++SLYL
Sbjct: 917 AARSPAIGCMELHDKFLEGIQLIKRDIVFASSLYL 951


>gi|340057335|emb|CCC51680.1| putative ATP-dependent DEAD/H RNA helicae [Trypanosoma vivax Y486]
          Length = 948

 Score =  728 bits (1880), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/931 (42%), Positives = 573/931 (61%), Gaps = 50/931 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 23  ALTFPYELDAFQKDSIDALEDGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSPIK 82

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE   +F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  VIFD
Sbjct: 83  ALSNQKFREFSDKFDSVGLMTGDTTIKVDSDCLVMTTEILRSMLYRGTEMLREVGCVIFD 142

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK-QPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA W+  +H     HV++T++
Sbjct: 143 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNANEFANWVESIHPGTKVHVIHTNY 202

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL HY++P G  G++L+VDE  +FREDNF +   +      G        SG +A+G
Sbjct: 203 RPVPLHHYLYPCGADGIFLIVDEHGKFREDNFRQAMASVGATSAGEGNGESSKSGALARG 262

Query: 309 ---GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
               S  G   I +I+K++M R   P+IVFSF++ ECE++A+++SKL+FN+ EE   V +
Sbjct: 263 KQKASRKGAEPIMEIIKLVMNRNMYPIIVFSFAKAECERNALALSKLNFNSTEEDALVTE 322

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
           VF NA++CL EEDR LPAIE +LPLL+RG+ +HHSGLLP++KE+VE+LFQ GLVK LF+T
Sbjct: 323 VFNNAMECLAEEDRRLPAIEHLLPLLRRGVGIHHSGLLPILKEVVEILFQAGLVKVLFST 382

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ETF+MGLNMPA+TVVFT+VKK+DG+++RY+  GEYIQMSGRAGRRG D  G+ I MV+E 
Sbjct: 383 ETFSMGLNMPARTVVFTSVKKFDGETNRYLTGGEYIQMSGRAGRRGLDRVGVVIAMVNEA 442

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           +E  TL+ +  G    L S+F L+Y  +LNL+ R E     E ++K SF QFQ  +  P 
Sbjct: 443 VEPETLRQITGGGADVLNSSFHLTYNMVLNLL-RVE-DVDPEFMMKRSFAQFQRLRNRPA 500

Query: 546 IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
           + K+  +L  E +S+    E    +Y + K  I+   K++   + +P  V  +   GRL+
Sbjct: 501 LEKRAEELATEISSIHVEHEDVFRQYTQCKELISCKRKQMGQFLKKPVFVKKFTHPGRLL 560

Query: 606 KVRE--GGTDWGWGV----------------------VVNVVKKPSAGVGTL-------- 633
            +R    G  + WG+                      V  + +K   G  +L        
Sbjct: 561 CIRRVTDGVLFNWGICRASHARVPGADTNDPSAYTVDVAVICRKADVGQPSLLVPCHVKD 620

Query: 634 --PSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN 691
              S    Y +      I  +++ R+++PPD      R  ++  + +L  ++   +P L 
Sbjct: 621 YTTSSADLYTLTFDFGDIDMVARFRVNIPPDPDSESGRAQMVQTLAKLYRQYGDDVPLLT 680

Query: 692 PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE---NQIRCFQRKAEVNHEIQQLK 748
             ++M ++DP+   L  Q+E L+  +  + L ++  +   +    F+++AE+  E++ +K
Sbjct: 681 S-EEMGVDDPQFAKLRVQVERLDANMRENELVRNPSKLLSSDYELFKKRAEMERELESIK 739

Query: 749 SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVTELMFN 806
           +++       F DELK   RVL++L +ID D VV  K R AC I T D  E+L+TEL+F 
Sbjct: 740 NELNQVSQAVFSDELKKMMRVLRRLDYIDKDNVVLRKARVACEITTSDENEILLTELLFK 799

Query: 807 GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
           G  N ++   + AL SC + V ++ +  +L  E  +PL  L E   +IA +  E  +   
Sbjct: 800 GVLNSMETEMIVALMSCLVNVHRTPDGFSLPEEFRQPLNDLNEIVNRIATLSIESGI-TQ 858

Query: 867 VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ- 925
            +  VE T+ P LM+V Y W+KGA F ++I  T+ +EG I+R  RRL+E L Q+  AA+ 
Sbjct: 859 ENTSVEKTM-PSLMEVTYLWAKGAKFIDIISKTNAYEGDIVRMMRRLEEQLRQMAGAARS 917

Query: 926 -AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+G + L  KF    + ++R I+F++SLYL
Sbjct: 918 PAIGCMELHDKFLKGIQLIKRDIVFASSLYL 948


>gi|407407933|gb|EKF31542.1| RNA helicase, putative [Trypanosoma cruzi marinkellei]
          Length = 948

 Score =  726 bits (1874), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/936 (42%), Positives = 575/936 (61%), Gaps = 56/936 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ++S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 19  AMTFPYELDSFQKLSIDALEDGDSVLVSAHTSAGKTTVALYAIAKALREKRRVIYTSPIK 78

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  VIFD
Sbjct: 79  ALSNQKFREFSEKFDSVGLMTGDTTIKADSDCLVMTTEILRSMLYRGTEMLREVGCVIFD 138

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK-QPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++TD+
Sbjct: 139 EVHYMRDKSRGVVWEETITLLPEGCQYVFLSATIPNAREFADWVESIHPGTNVHVIHTDY 198

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF--LKQKIGGRRENGKASGRMA 306
           RP PLQHY++P G  G++L+VDE+ +FR+DNF +   +   +  + GG   NG    + A
Sbjct: 199 RPVPLQHYLYPCGADGIFLIVDEQGKFRDDNFRRAMSSMGAMDAEAGG--ANGADVSKAA 256

Query: 307 KGGSGS------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
               G       G   I +I+K+ M+    P+IVFSFS+ ECE++A+++SKL+FN  EE 
Sbjct: 257 TSTRGKRKPFRKGTQPIMEIIKLTMDHNMYPIIVFSFSKAECERNALALSKLNFNNMEED 316

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V +VF NA++CL E+DR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE+LFQ GLVK
Sbjct: 317 ALVTEVFSNAMECLAEDDRQLPAIEHLLPLLKRGVGIHHSGLLPILKEVVEILFQAGLVK 376

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG D  G+ I 
Sbjct: 377 VLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRGLDRVGVVIA 436

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           MVDE +E  TLK +  G    L S+F L+Y  +LNL+ R E     E +++ SF QFQ  
Sbjct: 437 MVDEAVEPETLKQLTGGGADVLNSSFHLTYNMVLNLL-RVE-DVDPEFMMRRSFAQFQRL 494

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
           +  P + K+   L EE  S+    E    ++   +  +A   K+L   + +P  +  +  
Sbjct: 495 RNRPVLEKRAEALTEEIGSIHVEHEEVFRQFTLCQELLANRRKQLADILKQPTFLKRFTH 554

Query: 601 SGRLIKVREGGTD--WGWGV----------------------VVNVVKKPSAGVGT--LP 634
           SGRL+++R    D  + WG+                      V  +  K +A   T  LP
Sbjct: 555 SGRLLRIRRAADDVLFNWGICRDFHAKVPNADPKSPSEFSVDVAVICLKANAAQPTSLLP 614

Query: 635 --------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG 686
                   S    Y +      I ++++ R+++P +      R  ++  + +L  ++   
Sbjct: 615 CHVNDFTTSTADLYTLTFDFTDIESVARFRVNLPAEPDTESGRAQMVQTLSKLHRQYDDK 674

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL--NKSQD-ENQIRCFQRKAEVNHE 743
           +P L P ++M ++DP+   L  Q+E LE +L  +    N +++ E+    F  +A +  E
Sbjct: 675 VPLLTP-EEMGVDDPQFEKLRVQVERLEAQLAENEFVQNPTKELESDFERFTHRANLEKE 733

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVT 801
           +  ++ ++  +    F +ELK   RVL++L +ID D V+  K R AC I T D  E+L+T
Sbjct: 734 LNDIREELNQASRAIFSEELKQMMRVLRRLDYIDKDNVILRKARVACEITTTDENEILLT 793

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           EL+F G  N ++   + AL SC + V ++ +  +L  E  +PL++L E   +IA +  E 
Sbjct: 794 ELLFKGVLNSMETEMIVALMSCLVNVHRTPDGFSLPEEFQQPLKELNEIVSRIATVSIES 853

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            +       VE T+ P LM+V Y W+KGA F E++  T  +EG I+R  RRL+E L Q+ 
Sbjct: 854 GVLQEGGVSVERTM-PSLMEVTYMWAKGAKFVEIMSKTSAYEGEIVRMMRRLEEQLRQMA 912

Query: 922 AAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+  A+G + L  KF    + ++R I+F +SLYL
Sbjct: 913 GAARSPAIGSMELHDKFLKGIQLIKRDIVFVSSLYL 948


>gi|146104011|ref|XP_001469707.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
 gi|134074077|emb|CAM72819.1| putative ATP-dependent RNA helicase [Leishmania infantum JPCM5]
          Length = 954

 Score =  724 bits (1868), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/942 (41%), Positives = 580/942 (61%), Gaps = 64/942 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+R+IYTSP+K
Sbjct: 21  AITFPYELDTFQKTSIDALEEGDSVLVSAHTSAGKTTVALYAIAKALREKKRIIYTSPIK 80

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  +A CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 81  ALSNQKFREFSEKFDSVGLMTGDTTIKADADCLVMTTEILRSMLYRGTEMLREVGCVVFD 140

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+ ++H     HV++T++
Sbjct: 141 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVENIHPTTKVHVIHTEY 200

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR------------- 295
           RP PLQHY++P G  G++L+VDEK +FR+DNF K   +   +                  
Sbjct: 201 RPVPLQHYLYPAGADGIFLIVDEKGKFRDDNFGKAIASMGAEGGANGVGAAGPGNGSSKD 260

Query: 296 -RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
            R N K SG  + GG       + +IVK++M+R   PVIVFSF++ ECE++A+++S+L+F
Sbjct: 261 PRGNHKGSGGRSHGGFSQS---MMEIVKLVMDRNMYPVIVFSFAKAECERNALALSRLNF 317

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
           N  EE   V +VF NA++ L EEDR LPAIE + PLLKRG+ +HHSGLLP++KE+VE+LF
Sbjct: 318 NNTEEDALVMEVFNNAMESLAEEDRKLPAIEHLQPLLKRGVGIHHSGLLPILKEVVEILF 377

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
           Q GLVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG D 
Sbjct: 378 QAGLVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRGLDR 437

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G+ I MVDE +E +TLK +  G    L+S+F L+Y  +LNL+ R EG    E ++K SF
Sbjct: 438 VGVVITMVDEAVEPDTLKQLTSGGADVLLSSFHLTYNMVLNLL-RVEG-VDPEFMMKRSF 495

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPER 594
            QFQ  +  P + +K + L     +++ + E+   +Y   +  IA+ + ++   + +P+ 
Sbjct: 496 SQFQRLREKPALEEKGAALRRSIEAINVTHESAFRQYTICEDMIAKKKNEVDHILRQPKF 555

Query: 595 VLYYLGSGRLIKVREGGT--DWGWGVVVNVVKKPSAGVGTLPS----------------- 635
           +  ++ +GR + +       D+GWG+  +   K +    + PS                 
Sbjct: 556 LKNWVQAGRFVHIIRASDQRDFGWGICRSFAAKSTNPNFSDPSTFSIQAAVICMKADASN 615

Query: 636 ---------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
                          +   Y V      +  LS ++ ++P        R  ++  + +L+
Sbjct: 616 PSALTPCPVSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPESPDSERGRAEVVQILSKLQ 675

Query: 681 SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCFQRK 737
            +F   +P L   + M  ED ++  L  Q+  L+ +L  + L  S   + + +   ++RK
Sbjct: 676 RQFGHDIPVLTSAQ-MGAEDAQLSKLQTQLSNLQKQLEGNILAISPTPELQEEFEKYKRK 734

Query: 738 AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD- 796
           A++  +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I T D 
Sbjct: 735 ADLEAQLEQVKGELAGMGKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEITTTDE 794

Query: 797 -ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            E+L+TEL+F G  N ++   + AL SC + V ++ +  +L  E  +PL+ L E   +IA
Sbjct: 795 NEILLTELLFKGVLNSMETEMIVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEIVTRIA 854

Query: 856 EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            +  E  L    ++  E  V P LM+VIY W+KGA F +++ MT  +EG I+R+ RRL+E
Sbjct: 855 TVSAESGL--IQEDSSEEKVMPSLMEVIYLWAKGAKFVDLVSMTTAYEGDIVRTMRRLEE 912

Query: 916 FLNQLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L QL +AA+  A+G + L +KF    + ++R I+F++SLYL
Sbjct: 913 MLRQLASAARSPAIGSIELHEKFLKGIQLIKRDIVFASSLYL 954


>gi|398024538|ref|XP_003865430.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
 gi|322503667|emb|CBZ38753.1| ATP-dependent RNA helicase, putative [Leishmania donovani]
          Length = 954

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/942 (41%), Positives = 579/942 (61%), Gaps = 64/942 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+R+IYTSP+K
Sbjct: 21  AITFPYELDTFQKTSIDALEEGDSVLVSAHTSAGKTTVALYAIAKALREKKRIIYTSPIK 80

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  +A CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 81  ALSNQKFREFSEKFDSVGLMTGDTTIKADADCLVMTTEILRSMLYRGTEMLREVGCVVFD 140

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+ ++H     HV++T++
Sbjct: 141 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVENIHPTTKVHVIHTEY 200

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR------------- 295
           RP PLQHY++P G  G++L+VDEK +FR+DNF K   +   +                  
Sbjct: 201 RPVPLQHYLYPAGADGIFLIVDEKGKFRDDNFGKAIASMGAEGGANGVGAAGPGNGSSKD 260

Query: 296 -RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
            R N K SG  + GG       + +IVK++M+R   PVIVFSF++ ECE++A+++S+L+F
Sbjct: 261 PRGNHKGSGGRSHGGFSQS---MMEIVKLVMDRNMYPVIVFSFAKAECERNALALSRLNF 317

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
           N  EE   V +VF NA++ L EEDR LPAIE + PLLKRG+ +HHSGLLP++KE+VE+LF
Sbjct: 318 NNTEEDALVMEVFNNAMESLAEEDRKLPAIEHLQPLLKRGVGIHHSGLLPILKEVVEILF 377

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
           Q GLVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG D 
Sbjct: 378 QAGLVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRGLDR 437

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G+ I MVDE +E +TLK +  G    L+S+F L+Y  +LNL+ R EG    E ++K SF
Sbjct: 438 VGVVITMVDEAVEPDTLKQLTSGGADVLLSSFHLTYNMVLNLL-RVEG-VDPEFMMKRSF 495

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPER 594
            QFQ  +  P + +K + L     +++ + E+   +Y   +  IA+   ++   + +P+ 
Sbjct: 496 SQFQRLREKPALEEKGAALRRSIEAINVTHESAFRQYTICEDMIAKKRNEVDHILRQPKF 555

Query: 595 VLYYLGSGRLIKVREGGT--DWGWGVVVNVVKKPSAGVGTLPS----------------- 635
           +  ++ +GR + +       D+GWG+  +   K +    + PS                 
Sbjct: 556 LKNWVQAGRFVHIIRASDQRDFGWGICRSFAAKSTNPNFSDPSTFSIQAAVICMKADASN 615

Query: 636 ---------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
                          +   Y V      +  LS ++ ++P        R  ++  + +L+
Sbjct: 616 PSALTPCPVSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPESPDSERGRAEVVQILSKLQ 675

Query: 681 SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCFQRK 737
            +F   +P L   + M  ED ++  L  Q+  L+ +L  + L  S   + + +   ++RK
Sbjct: 676 RQFGHDIPVLTSAQ-MGAEDAQLSKLQTQLSNLQKQLEGNILAISPTPELQEEFEKYKRK 734

Query: 738 AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD- 796
           A++  +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I T D 
Sbjct: 735 ADLEAQLEQVKGELAGMGKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEITTTDE 794

Query: 797 -ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            E+L+TEL+F G  N ++   + AL SC + V ++ +  +L  E  +PL+ L E   +IA
Sbjct: 795 NEILLTELLFKGVLNSMETEMIVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEIVTRIA 854

Query: 856 EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            +  E  L    ++  E  V P LM+VIY W+KGA F +++ MT  +EG I+R+ RRL+E
Sbjct: 855 TVSAESGL--IQEDSSEEKVMPSLMEVIYLWAKGAKFVDLVSMTTAYEGDIVRTMRRLEE 912

Query: 916 FLNQLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L QL +AA+  A+G + L +KF    + ++R I+F++SLYL
Sbjct: 913 MLRQLASAARSPAIGSIELHEKFLKGIQLIKRDIVFASSLYL 954


>gi|407849043|gb|EKG03906.1| RNA helicase, putative [Trypanosoma cruzi]
          Length = 948

 Score =  723 bits (1866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/936 (42%), Positives = 576/936 (61%), Gaps = 56/936 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ++S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 19  AMTFPYELDSFQKLSIDALEDGDSVLVSAHTSAGKTTVALYAIAKALREKRRVIYTSPIK 78

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  VIFD
Sbjct: 79  ALSNQKFREFSEKFDSVGLMTGDTTIKADSDCLVMTTEILRSMLYRGTEMLREVGCVIFD 138

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK-QPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++TD+
Sbjct: 139 EVHYMRDKSRGVVWEETITLLPEGCQYVFLSATIPNAREFADWVESIHPGTKVHVIHTDY 198

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF--LKQKIGGRRENGKASGRMA 306
           RP PLQHY++P G  G++L+VDE+ +FR+DNF +   +   +  + GG   NG    + A
Sbjct: 199 RPVPLQHYLYPCGADGIFLIVDEQGKFRDDNFRRAMSSMGAMDAEAGG--ANGADVSKAA 256

Query: 307 KGGSGS------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
               G       G   I +I+K+ M+    P+IVFSFSR ECE++A+++SKL+FN  EE 
Sbjct: 257 TSTRGKRKPPRKGTQPIMEIIKLAMDHNMYPIIVFSFSRAECERNALALSKLNFNNMEED 316

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V +VF NA++CL E+DR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE+LFQ GLVK
Sbjct: 317 ALVTEVFSNAMECLAEDDRQLPAIEHLLPLLKRGVGIHHSGLLPILKEVVEILFQAGLVK 376

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG D  G+ I 
Sbjct: 377 VLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRGLDRVGVVIA 436

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           MVDE +E  TLK +  G    L S+F L+Y  +LNL+ R E     E +++ SF QFQ  
Sbjct: 437 MVDEAVEPETLKQLTGGGADVLNSSFHLTYNMVLNLL-RVE-DVDPEFMMRRSFAQFQRL 494

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
           +  P + K+   L EE  S+    E    ++   +  +A   K+L   + +P  +  +  
Sbjct: 495 RNRPVLEKRAEALTEEIESIHVEHEEVFRQFTLCQELLANRRKQLADILKQPTFLKRFTH 554

Query: 601 SGRLIKVREGGTD--WGWGV----------------------VVNVVKKPSAGVGT--LP 634
           SGRL+++R    D  + WG+                      V  +  K +A   T  LP
Sbjct: 555 SGRLLRIRRAADDVLFNWGICRAFHAKVPNADPKSPSEFSVDVAVICLKANAAKPTSLLP 614

Query: 635 --------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG 686
                   S    Y +      I ++++ R+++P +      R  ++  + +L  ++ + 
Sbjct: 615 CHVNDFTTSTADLYTLTFDFTDIESVARFRVNLPAEPDTESGRAQMVQTLSKLHRQYDEK 674

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL--NKSQD-ENQIRCFQRKAEVNHE 743
           +P L   ++M ++DP+   L  Q+E LE +L  +    N +++ E+    F  +A++  E
Sbjct: 675 VPLLT-AEEMGVDDPQFEKLRVQVERLEAQLAENEFVQNPTKELESDFEHFTHRAKLEKE 733

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVT 801
           +  ++ ++  +    F +ELK   RVL++L +ID D V+  K R AC I T D  E+L+T
Sbjct: 734 LNDIREELNQASQAIFSEELKQMMRVLRRLDYIDKDNVILRKARVACEITTTDENEILLT 793

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           EL+F G  N ++   + AL SC + V ++ +  +L  E  +PL++L E   +IA +  E 
Sbjct: 794 ELLFKGVLNSMETEMIVALMSCLVNVHRTPDGFSLPEEFQQPLKELNEIVSRIATVSIES 853

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            +       VE T+ P LM+V Y W+KGA F +++  T  +EG I+R  RRL+E L Q+ 
Sbjct: 854 GVLQEGGVGVERTM-PSLMEVTYMWAKGAKFVDIMGKTSAYEGEIVRMMRRLEEQLRQMA 912

Query: 922 AAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+  A+G + L  KF    + ++R I+F +SLYL
Sbjct: 913 GAARSPAIGSMELHDKFLKGIQLIKRDIVFVSSLYL 948


>gi|401420326|ref|XP_003874652.1| putative ATP-dependent RNA helicase [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322490888|emb|CBZ26152.1| putative ATP-dependent RNA helicase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 954

 Score =  717 bits (1850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/947 (41%), Positives = 575/947 (60%), Gaps = 74/947 (7%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 21  AITFPYELDTFQKTSIDALEEGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSPIK 80

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE   +F  VGLMTGD T+  +A CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 81  ALSNQKFREFSDKFDSVGLMTGDTTIKADADCLVMTTEILRSMLYRGTEMLREVGCVVFD 140

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++TD+
Sbjct: 141 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVESIHPTTKVHVIHTDY 200

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PLQHY++P G  G++L+VDEK +FR+DNF K         I      G A+G  A G
Sbjct: 201 RPVPLQHYLYPAGADGIFLIVDEKGKFRDDNFGK--------AIASMGTEGVANGVGAAG 252

Query: 309 GSGSGGSD-------------------IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
            +     D                   + +IVK++M+R   PVIVFSF++ ECE++A+++
Sbjct: 253 PANGSSKDPRGNHKGGGGRSHGGSSQSMMEIVKLVMDRNMYPVIVFSFAKAECERNALAL 312

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
           S+L+FN  EE   V +VF NA++ L EEDR LPAIE + PLLKRG+ +HHSGLLP++KE+
Sbjct: 313 SRLNFNNTEEDALVMEVFNNAMESLAEEDRKLPAIEHLHPLLKRGVGIHHSGLLPILKEV 372

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
           VE+LFQ GLVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGR
Sbjct: 373 VEILFQAGLVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGR 432

Query: 470 RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
           RG D  G+ I MVDE +E +TLK +  G    L+S+F L+Y  +LNL+ R E     E +
Sbjct: 433 RGLDRVGVVIAMVDEAVEPDTLKQLTGGGADVLLSSFHLTYNMVLNLL-RVE-DVDPEFM 490

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEI 589
           +K SF QFQ  +  P + +K + L      ++ + E+   +Y   +  IA+   ++   +
Sbjct: 491 MKRSFSQFQRLRDKPALEEKGAALRRSIEEINLTHESAFRQYTICEDMIAKKRNEVDHIL 550

Query: 590 TRPERVLYYLGSGRLIKVREGGT--DWGWGVVVNVVKKPSAGVGTLPS------------ 635
            +P+ +  ++ +GR + +       D+GWGV  +   K +    + PS            
Sbjct: 551 RQPKFLKNWVQTGRFVHIVRASDQLDFGWGVCRSFAAKSTNPNFSDPSTFSIQAAVICMK 610

Query: 636 --------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLA 675
                               +   Y V      + +LS ++ ++P +      R  ++  
Sbjct: 611 ADASNPSALTPCPVSEYTSEKADLYTVTFDFSDVQSLSTLKTNLPENPDSERGRAEVVQI 670

Query: 676 VQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIR 732
           + +L+ +F   +P L   + M  ED ++  L  Q+ +L+ +L  + L  S   + + +  
Sbjct: 671 LSKLQRQFGNSIPVLTSAQ-MGAEDAQLSKLQTQVSKLQKQLEDNILATSPTPELQEEFE 729

Query: 733 CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
            ++RKA++  +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I
Sbjct: 730 QYKRKADLEAQLEQVKGELAGMSKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEI 789

Query: 793 DTGD--ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
            T D  E+L+TEL+F G  N ++   + AL SC + V ++ +  +L  E  +PL+ L E 
Sbjct: 790 TTTDENEILLTELLFKGVLNSMETEMIVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEI 849

Query: 851 ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
             +IA +  E  L +  +  VE  V P LM+V Y W+KGA F +++  T  +EG I+R  
Sbjct: 850 VTRIATVSAESGL-MQENSSVEK-VMPSLMEVTYLWAKGAKFVDLVSKTTAYEGDIVRMM 907

Query: 911 RRLDEFLNQLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           RRL+E L QL +AA+  A+G + L +KF    + ++R I+F++SLYL
Sbjct: 908 RRLEEMLRQLASAARSPAIGSIELHEKFLKGIQLIKRDIVFASSLYL 954


>gi|389603290|ref|XP_001568941.2| putative ATP-dependent RNA helicase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|322505796|emb|CAM44074.2| putative ATP-dependent RNA helicase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 954

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/945 (40%), Positives = 574/945 (60%), Gaps = 70/945 (7%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 21  AITFPYELDTFQKASIDALEDGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSPIK 80

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 81  ALSNQKFREFSEKFDSVGLMTGDTTIKADSDCLVMTTEILRSMLYRGTEMLREVGCVVFD 140

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++T++
Sbjct: 141 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVESIHPTTKVHVIHTNY 200

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PLQHY++P G  G++L+VDEK +FREDNF K   +       G   +   +G    G
Sbjct: 201 RPVPLQHYLYPAGADGIFLIVDEKGKFREDNFGKAMTSM------GAEGSANGAGAAVPG 254

Query: 309 GSGSG-----------------GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
            S S                     + +IVK++M+R   PVIVFSF++ ECE++A+++S+
Sbjct: 255 NSASSGPRGNKGGGGGHRRGGSSQSMMEIVKLVMDRNMYPVIVFSFAKAECERNALALSR 314

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           L+FN  EE   V +VF NA++ L EEDR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE
Sbjct: 315 LNFNNTEEDALVMEVFGNAMESLAEEDRKLPAIEHLLPLLKRGVGIHHSGLLPILKEVVE 374

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           +LFQ GLVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG
Sbjct: 375 ILFQAGLVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRG 434

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G+ I MVDE +E +TLK +  G    L+S+F L+Y  +LNL+ R E     E ++K
Sbjct: 435 LDRVGVVIAMVDEAVEPDTLKQLTGGGADVLLSSFHLTYNMVLNLL-RVE-DVDPEFMMK 492

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            SF QFQ  +  P + +K + L      +  + E+   +Y   +  I++ + ++   + +
Sbjct: 493 RSFSQFQRLRDKPALEEKCAALRRSIEEIHVANESAFRQYTICEDMISKKKGEVNQILHQ 552

Query: 592 PERVLYYLGSGRLIKVREGGT--DWGWGVVVNVVKKPS-------------AGVGTLPS- 635
           P+ +  ++ +GR + +       D+GWG+  +   K +             A V  L + 
Sbjct: 553 PKFLKNWVQAGRFVHIIRASDQLDFGWGICRSFTAKNTNPDFSDASTFSIHAAVICLKAD 612

Query: 636 ------------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
                             +   Y V      + +L+ ++ ++P        R  ++  + 
Sbjct: 613 VLNPTALTPCPVSEYTSEKADLYTVMFDFSDVQSLATLKTNLPESPDSERGRAEMVQILS 672

Query: 678 ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCF 734
           +L+ +F   +P L   + M  ED ++  L  Q+  L+ +L  + L  S   + + +   +
Sbjct: 673 KLQRQFGSNVPVLTAAQ-MGPEDAQLSKLQKQVSNLQKQLEGNVLTTSPTPELQEEFEQY 731

Query: 735 QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT 794
           +RKA++  +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I T
Sbjct: 732 KRKADLETQLEQVKDELASMGKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEITT 791

Query: 795 GD--ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            D  E+L+TEL+F G  N ++   V AL SC + V ++ +  +L  E  +PL+ L E   
Sbjct: 792 TDENEILLTELLFKGVLNSMETEMVVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEVVT 851

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           +IA +  E  L +  +  VE  V P LM+V Y W+KGA F +++  T  +EG I+R  RR
Sbjct: 852 RIATVSAESGL-MQENSSVEK-VMPSLMEVTYLWAKGAKFVDLVSKTTAYEGEIVRMMRR 909

Query: 913 LDEFLNQLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L+E L QL +AA+  A+G + L  KF    + ++R I+F++SLYL
Sbjct: 910 LEEMLRQLASAARSPAIGSIVLHDKFLKGVQLIKRDIVFASSLYL 954


>gi|84994958|ref|XP_952201.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
 gi|65302362|emb|CAI74469.1| ATP-dependent RNA helicase, putative [Theileria annulata]
          Length = 1027

 Score =  711 bits (1836), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/945 (41%), Positives = 571/945 (60%), Gaps = 70/945 (7%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            AK Y F LD FQ+ S+  LER+ESVLV AHTSAGKT VAEYAIAM  RD  R+IYTSP+K
Sbjct: 94   AKKYPFTLDEFQKRSIESLERDESVLVCAHTSAGKTVVAEYAIAMGLRDGHRIIYTSPIK 153

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR L  EF DVGLMTGDVTL+PNAS +VMTTEILR MLYRGSE+++E+  VIFD
Sbjct: 154  ALSNQKYRNLSDEFVDVGLMTGDVTLNPNASVMVMTTEILRSMLYRGSEIVQEMKCVIFD 213

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HYM+D ERGVVWEE+II +P  + +VFLSAT+ N  +F+EWI  + + PC+V+ TD+R
Sbjct: 214  EVHYMRDLERGVVWEETIILIPNKVNLVFLSATIPNYLEFSEWITRIKRIPCNVISTDYR 273

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN--GKASGRMAK 307
            P PL HY++  G  G+YL++DE   F+  N+ K           G + N   K SG   K
Sbjct: 274  PVPLNHYLYMSGAEGIYLILDEDNNFKSSNYNKCLS-------AGSQNNFRDKESGSRDK 326

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
                S   DI  IVK+  ++   P I+FSFS+ +CE  A ++  LD  + EEK  +++++
Sbjct: 327  RRITSTFKDIENIVKLCFDKNLAPCIIFSFSKSDCETSATAVRHLDMTSDEEKKLIDEIY 386

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            +NA+  L+E+DR LP    MLPLLK GI +HH GLLP+IKE++E+LFQE L+K LF+TET
Sbjct: 387  KNAMATLSEQDRLLPQNLFMLPLLKNGIGIHHGGLLPIIKEIIEILFQESLLKVLFSTET 446

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
            F+MGLNMPAKTVVFT +KKWDG   RYI SGEYIQM+GRAGRRG D  G+ IIM+D+   
Sbjct: 447  FSMGLNMPAKTVVFTKMKKWDGREVRYISSGEYIQMAGRAGRRGLDTIGVVIIMLDKSDA 506

Query: 488  M--NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
            +    +K + LGKP  L STF L Y  +LNLM R E   T E++I+ SF QFQ +    +
Sbjct: 507  LIDEEVKKIFLGKPLNLDSTFHLGYNMLLNLM-RIEDT-TPEYLIERSFMQFQVKNKSAE 564

Query: 546  IGKKVSKLEEEAASLDASGEAEV----AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            I  K+ + + +  SL +  ++E+    +  H+ K  + +L +K+ + +    + L YL  
Sbjct: 565  ISSKLKEAKVKLESLRSQFDSELFLLTSSLHENKEKLEKLNEKMSNIVMNDTKSLNYLNY 624

Query: 602  GRLIKVREGGTDWGWGVVVNVVK----KPS---------------AGVGTLPSR----GG 638
            GRLI V+     WGW V ++  K     P                 G    PS     G 
Sbjct: 625  GRLIYVKNDQV-WGWAVCISPPKLKLNNPKNLKKYHFDCLYQVNMKGDAMYPSTETCWGR 683

Query: 639  GYIVPVQLPLISTLSKIRLSV--PPDLRPLDARQSILLAVQELESRFPQ--GLPKLNPVK 694
              +    +  I  +S+IR+++    D+   + + +++   ++L         LP L+PV+
Sbjct: 684  FEVKAFPIDSIKKMSQIRITIHEKVDVESQNFQNAMVNKFEQLSKHIQTLGQLPLLHPVE 743

Query: 695  DMKIEDPEVVDLV-----------------------NQIEELEHKLFAHPLNKSQDENQI 731
             MKI + ++  ++                       ++I+ L +++ A PL   +D  ++
Sbjct: 744  HMKINNQDLTHILSYLVDTTLHLIKYLYLKNTKSMSSEIDRLMNEINASPLPMREDYKEL 803

Query: 732  RC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
               ++  ++V  E ++L++++++      +DEL++   VL+KL ++D  G V +KGR AC
Sbjct: 804  FSRYEEYSKVRKETEELENQLKECTQIIMKDELRHMKSVLRKLEYVDQFGTVTIKGRIAC 863

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             I+  DELLV+EL     F +++   + A  SC +  D+   +    ++L     +++E 
Sbjct: 864  EINATDELLVSELFLRNFFENMEPEHICASLSCLVNDDRKEGKSPTELKLIDAYNKIREI 923

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            A +I ++  +C + V+  EYV + +RP LM V+Y W+KG  F E++  + +FEGS+IR  
Sbjct: 924  ATEIVDVMIDCGIIVDESEYV-NRLRPTLMSVVYRWAKGDPFIEILAESSVFEGSVIRCI 982

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RRLDE L QL  A++ +G + +E+ F      L++GI F++SLYL
Sbjct: 983  RRLDELLRQLACASRNIGNMTMEQTFLTCISKLKKGIAFTSSLYL 1027


>gi|449310650|gb|AGE92552.1| ATP-dependent RNA helicase, partial [Leishmania braziliensis]
          Length = 949

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/945 (40%), Positives = 573/945 (60%), Gaps = 70/945 (7%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 16  AITFPYELDTFQKASIDALEDGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSPIK 75

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 76  ALSNQKFREFSEKFDSVGLMTGDTTIKADSDCLVMTTEILRSMLYRGTEMLREVGCVVFD 135

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++T++
Sbjct: 136 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVESIHPTTKVHVIHTNY 195

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PLQHY++P G  G++L+VDEK +FREDNF K   +       G   +   +G    G
Sbjct: 196 RPVPLQHYLYPAGADGIFLIVDEKGKFREDNFGKAMTSM------GAEGSANGAGAAVPG 249

Query: 309 GSGSG-----------------GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
            S S                     + +IVK++M+R   PVIVFSF++ ECE++A+++S+
Sbjct: 250 NSASSGPRGNKGGGGGHRRGGSSQSMMEIVKLVMDRNMYPVIVFSFAKAECERNALALSR 309

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           L+FN  EE   V +VF NA++ L EEDR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE
Sbjct: 310 LNFNNTEEDALVMEVFGNAMESLAEEDRKLPAIEHLLPLLKRGVGIHHSGLLPILKEVVE 369

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           +LFQ GLVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG
Sbjct: 370 ILFQAGLVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRG 429

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G+ I MVDE +E +TLK +  G    L+S+F L+Y  +LNL+ R E     E ++K
Sbjct: 430 LDRVGVVIAMVDEAVEPDTLKQLTGGGADVLLSSFHLTYNMVLNLL-RVE-DVDPEFMMK 487

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            SF QFQ  +  P + +K + L      +  + E+   +Y   +  I++ + ++   + +
Sbjct: 488 RSFSQFQRLRDKPALEEKCAALRRSIEEIHVANESAFRQYTICEDMISKKKGEVNQILHQ 547

Query: 592 PERVLYYLGSGRLIKVREGGT--DWGWGVVVNVVKK------------------------ 625
           P+ +  ++ +GR + +       D+GWG+  +   K                        
Sbjct: 548 PKFLKNWVQAGRFVHIIRASDQLDFGWGICRSFTAKNTNPDFSDASTFSIHVAVICLKAD 607

Query: 626 ---PSAGVGTLPS-----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
              P+A      S     +   Y V      + +L+ ++ ++P        R  ++  + 
Sbjct: 608 VLNPTALTPCPVSEYTSEKADLYTVMFDFSDVQSLATLKTNLPESPDSERGRAEMVQILS 667

Query: 678 ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCF 734
           +L+ +F   +P L   + M  ED ++  L  Q+  L+ +L  + L  S   + + +   +
Sbjct: 668 KLQRQFGSNVPVLTAAQ-MGPEDAQLSKLQKQVSNLQKQLEGNVLTTSPTPELQEEFEQY 726

Query: 735 QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT 794
           +RKA++  +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I T
Sbjct: 727 KRKADLETQLEQVKDELAGMGKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEITT 786

Query: 795 GD--ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            D  E+L+TEL+F G  N ++   V AL SC + V ++ +  +L  E  +PL+ L E   
Sbjct: 787 TDENEILLTELLFKGVLNSMETEMVVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEVVT 846

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           +IA +  E  L +  +  VE  V P LM+V Y W+KGA F +++  T  +EG I+R  RR
Sbjct: 847 RIATVSAESGL-MQENSSVEK-VMPSLMEVTYLWAKGAKFVDLVSKTTAYEGEIVRMMRR 904

Query: 913 LDEFLNQLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L+E L QL +AA+  A+G + L  KF    + ++R I+F++SLYL
Sbjct: 905 LEEMLRQLASAARSPAIGSIVLHDKFLKGVQLIKRDIVFASSLYL 949


>gi|449310626|gb|AGE92540.1| ATP-dependent RNA helicase [Leishmania braziliensis]
          Length = 954

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/945 (40%), Positives = 573/945 (60%), Gaps = 70/945 (7%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 21  AITFPYELDTFQKASIDALEDGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSPIK 80

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 81  ALSNQKFREFSEKFDSVGLMTGDTTIKADSDCLVMTTEILRSMLYRGTEMLREVGCVVFD 140

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++T++
Sbjct: 141 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVESIHPTTKVHVIHTNY 200

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PLQHY++P G  G++L+VDEK +FREDNF K   +       G   +   +G    G
Sbjct: 201 RPVPLQHYLYPAGADGIFLIVDEKGKFREDNFGKAMTSM------GAEGSANGAGAAVPG 254

Query: 309 GSGSG-----------------GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
            S S                     + +IVK++M+R   PVIVFSF++ ECE++A+++S+
Sbjct: 255 NSASSGPRGNKGGGGGHRRGGSSQSMMEIVKLVMDRNMYPVIVFSFAKAECERNALALSR 314

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           L+FN  EE   V +VF NA++ L EEDR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE
Sbjct: 315 LNFNNTEEDALVMEVFGNAMESLAEEDRKLPAIEHLLPLLKRGVGIHHSGLLPILKEVVE 374

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           +LFQ GLVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG
Sbjct: 375 ILFQAGLVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRG 434

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G+ I MVDE +E +TLK +  G    L+S+F L+Y  +LNL+ R E     E ++K
Sbjct: 435 LDRVGVVIAMVDEAVEPDTLKQLTGGGADVLLSSFHLTYNMVLNLL-RVE-DVDPEFMMK 492

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            SF QFQ  +  P + +K + L      +  + E+   +Y   +  I++ + ++   + +
Sbjct: 493 RSFSQFQRLRDKPALEEKCAALRRSIEEIHVANESAFRQYTICEDMISKKKGEVNQILHQ 552

Query: 592 PERVLYYLGSGRLIKVREGGT--DWGWGVVVNVVKK------------------------ 625
           P+ +  ++ +GR + +       D+GWG+  +   K                        
Sbjct: 553 PKFLKNWVQAGRFVHIIRASDQLDFGWGICRSFTAKNTNPDFSDASTFSIHVAVICLKAD 612

Query: 626 ---PSAGVGTLPS-----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
              P+A      S     +   Y V      + +L+ ++ ++P        R  ++  + 
Sbjct: 613 VLNPTALTPCPVSEYTSEKADLYTVMFDFSDVQSLATLKTNLPESPDSERGRAEMVQILS 672

Query: 678 ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCF 734
           +L+ +F   +P L   + M  ED ++  L  Q+  L+ +L  + L  S   + + +   +
Sbjct: 673 KLQRQFGSNVPVLTAAQ-MGPEDAQLSKLQKQVSNLQKQLEGNVLTTSPTPELQEEFEQY 731

Query: 735 QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT 794
           +RKA++  +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I T
Sbjct: 732 KRKADLETQLEQVKDELAGMGKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEITT 791

Query: 795 GD--ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            D  E+L+TEL+F G  N ++   V AL SC + V ++ +  +L  E  +PL+ L E   
Sbjct: 792 TDENEILLTELLFKGVLNSMETEMVVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEVVT 851

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           +IA +  E  L +  +  VE  V P LM+V Y W+KGA F +++  T  +EG I+R  RR
Sbjct: 852 RIATVSAESGL-MQENSSVEK-VMPSLMEVTYLWAKGAKFVDLVSKTTAYEGEIVRMMRR 909

Query: 913 LDEFLNQLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L+E L QL +AA+  A+G + L  KF    + ++R I+F++SLYL
Sbjct: 910 LEEMLRQLASAARSPAIGSIVLHDKFLKGVQLIKRDIVFASSLYL 954


>gi|157877094|ref|XP_001686879.1| putative ATP-dependent RNA helicase [Leishmania major strain
           Friedlin]
 gi|68129954|emb|CAJ09262.1| putative ATP-dependent RNA helicase [Leishmania major strain
           Friedlin]
          Length = 968

 Score =  710 bits (1833), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/939 (41%), Positives = 572/939 (60%), Gaps = 58/939 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 35  AITFPYELDTFQKTSIDALEEGDSVLVSAHTSAGKTTVALYAIAKALREKKRVIYTSPIK 94

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F  VGLMTGD T+  +A CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 95  ALSNQKFREFSEKFDSVGLMTGDTTIKADADCLVMTTEILRSMLYRGTEMLREVGCVVFD 154

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH-KQPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FA+W+  +H     HV++TD+
Sbjct: 155 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFADWVESIHPTTKVHVIHTDY 214

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PLQHY++P G  G++L+VDEK +FR+DNF K   +   +               +K 
Sbjct: 215 RPVPLQHYLYPAGADGIFLIVDEKGKFRDDNFGKAIASMGAEGGANGVGAAGPGNGSSKD 274

Query: 309 GSGS-----------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
             G+               + +IVK++M+R   PVIVFSF++ ECE++A+++S+L+FN  
Sbjct: 275 PRGNHKGGGGRSHGGSSQSMMEIVKLVMDRNMYPVIVFSFAKAECERNALALSRLNFNNA 334

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           EE   V +VF NA++ L EEDR LPAIE + PLLKRG+ +HHSGLLP++KE+VE+LFQ G
Sbjct: 335 EEDALVMEVFNNAMESLAEEDRKLPAIEHLHPLLKRGVGIHHSGLLPILKEIVEILFQAG 394

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           LVK LF+TETF+MGLNMPA+TVVFT+VKK+DG+ +RY+  GEYIQMSGRAGRRG D  G+
Sbjct: 395 LVKVLFSTETFSMGLNMPARTVVFTSVKKFDGEKNRYLTGGEYIQMSGRAGRRGLDRVGV 454

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
            I MVDE +E NTLK +  G    L+S+F L+Y  +LNL+ R E     E ++K SF QF
Sbjct: 455 VIAMVDEAVEPNTLKQLTGGGADVLLSSFHLTYNMVLNLL-RVE-DVDPEFMMKRSFSQF 512

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
           Q  +  P + +K + L      ++ + E+   +Y   +  IA+ + ++   + +P+ +  
Sbjct: 513 QRLRDKPALEEKGAALRRSIEEINVAHESAFRQYTICEDMIAKKKNEVSHILRQPKLLKN 572

Query: 598 YLGSGRLIKVREGGT--DWGWGVVVNVVKKPSAGVGTLPS-------------------- 635
           ++ +GR + +       D+GWG+  +   K +    + PS                    
Sbjct: 573 WVQAGRFVHIIRASDQRDFGWGICRSFAAKSTNPNFSDPSTFSIQAAVICMKADASNPSA 632

Query: 636 ------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF 683
                       +   Y V      +  LS ++ ++P +      R  ++  + +L+ +F
Sbjct: 633 LTPCPVSEYTSEKADLYTVTFDFSDVQCLSTLKTNLPENPDSERGRAEVVQILSKLQRQF 692

Query: 684 PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCFQRKAEV 740
              +P L   + M  ED ++  L  Q+  L+ +L  + L  S   + + +   ++RKA++
Sbjct: 693 GHDIPVLTSAQ-MGAEDVQLSKLQTQLSNLQKQLEGNILATSPTPELQEEFEQYKRKADL 751

Query: 741 NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--EL 798
             +++Q+K ++       F +ELK   RVL++L +ID D ++  K R AC I T D  E+
Sbjct: 752 EAQLEQVKGELAGMGKAVFSEELKQMMRVLRRLDYIDKDNIILRKARVACEITTTDENEI 811

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
           L+TEL+F G  N ++   + AL SC + V ++ +  +L  E  +PL+ L E   +IA + 
Sbjct: 812 LLTELLFKGVLNSMETEMIVALLSCLVNVHRTPDGFSLPQEFEQPLKDLNEIVTRIATVS 871

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
            E  L +  +  VE  V P LM+V Y W+KGA F +++  T  +EG I+R  RRL+E L 
Sbjct: 872 AESGL-LQENSSVEK-VMPSLMEVTYLWAKGAKFVDLVSKTTAYEGDIVRMMRRLEEMLR 929

Query: 919 QLRAAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           QL +AA+  A+G + L +KF    + ++R I+F++SLYL
Sbjct: 930 QLASAARSPAIGSIELHEKFLKGIQLIKRDIVFASSLYL 968


>gi|308451192|ref|XP_003088579.1| hypothetical protein CRE_03570 [Caenorhabditis remanei]
 gi|308246502|gb|EFO90454.1| hypothetical protein CRE_03570 [Caenorhabditis remanei]
          Length = 895

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/869 (44%), Positives = 534/869 (61%), Gaps = 57/869 (6%)

Query: 1   MEESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTF 60
           M E  +A + +  EE+ +     E       +    +C HEVA+P      + E      
Sbjct: 57  MFEETVAKRARIEEEEENTDDRMENIVVHTIQTNNENCTHEVAIPPNSKFRQLEP----- 111

Query: 61  ANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQ 120
                NGE AK Y F+LD FQ+ ++ C++ NESVLVSAHTSAGKT VA YAIA   R+KQ
Sbjct: 112 ----KNGEPAKYYPFQLDAFQKQAILCIDNNESVLVSAHTSAGKTVVATYAIAQCLREKQ 167

Query: 121 RVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVL 180
           RVIYTSP+KALSNQKYREL +EFKDVGLMTGDVT++P+ASCLVMTTEILR MLYRGSE++
Sbjct: 168 RVIYTSPIKALSNQKYRELEEEFKDVGLMTGDVTINPDASCLVMTTEILRSMLYRGSEII 227

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
           KEV WV++DEIHYM+D+ERGVVWEE+II +   +K  FLSAT+ NA +FA+W+C + +QP
Sbjct: 228 KEVGWVVYDEIHYMRDKERGVVWEETIILMSSNVKQAFLSATIPNAREFAQWVCSIKQQP 287

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK---------------EQFREDNFVKLQD 285
            +VVYTD+RPTPLQH+++PVGG G+Y VV+ K                +FRED F     
Sbjct: 288 VNVVYTDYRPTPLQHFIYPVGGEGMYEVVNVKVCLNIFLANTMNCVQGEFREDKF----- 342

Query: 286 TFLKQKIGGRRENGKASGRMAK--GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE 343
                 + G    G ++G   K       G S++ KI++ +        IVFSFSR+ECE
Sbjct: 343 ---NDAMSGLATAGDSAGSFQKRRTNGTQGDSNVLKIIRSVATNDGLNCIVFSFSRKECE 399

Query: 344 QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLL 403
            +A+S+  +DFN   EK  V+ V+++A+  L+ ED+NLP I  +LPLLKRGI VHHSGL+
Sbjct: 400 SYAISLKDMDFNQAHEKGMVKSVYESAISQLSPEDQNLPQILNILPLLKRGIGVHHSGLM 459

Query: 404 PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQM 463
           P++KE +E+LF EGLVK LFATETF+MGLNMPA+TVVFT+ +K+DG  + YI +GEYIQM
Sbjct: 460 PILKETIEILFGEGLVKVLFATETFSMGLNMPARTVVFTSARKFDGTDNPYISTGEYIQM 519

Query: 464 SGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQ 523
           +GRAGRRGKDDRG  I+MVD  M  +  K ++ G   PL S FRL+Y  +LNLM R EG 
Sbjct: 520 AGRAGRRGKDDRGTVILMVDSAMSSDDAKQIIKGATDPLNSQFRLTYNMVLNLM-RVEG- 577

Query: 524 FTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIA-QLE 582
                +I NSFHQFQ    +P+I KK  + E++ AS   S E ++  Y    LD+  QLE
Sbjct: 578 MAVSWIINNSFHQFQSYSKIPEIDKKCVQAEKKVASFKFSWETDMCTY----LDVQNQLE 633

Query: 583 KKLMSEITRPERVLYYLG--SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY 640
           K L   +     V++Y       ++ V++          ++     +   G   SR    
Sbjct: 634 KTLSCLL-----VMFYYSYVCDMIVAVKDDQK-------LDPTNPATLTPGFDLSRRKWI 681

Query: 641 IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
            VP+    I+ +S IRL +P  +   DA+  +   +     R    +P L+P+ DM I +
Sbjct: 682 RVPMSTDRITAISAIRLKIPAHIESQDAQFRLDTVMTAAMKRLGGDVPLLDPITDMDIRN 741

Query: 701 PEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
           PE+  LV++ + L+ +L  H + N++  E+  + ++ K +   E + LK++ +  +    
Sbjct: 742 PEIHVLVDREKTLKSRLENHRMSNRADLEDCKKQYEVKLDAIKEFEALKAERKGLKSTLH 801

Query: 760 RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
            +EL NR RVL++LG++  D  ++LKGR AC +   DEL++TE++  G FN LD  Q AA
Sbjct: 802 LEELDNRKRVLRRLGYLRNDDSLELKGRVACELSASDELILTEMLLKGLFNSLDVAQTAA 861

Query: 820 LASCFIPVDKSSEQINLRMELAKPLQQLQ 848
           L SCF+  D  S    L  EL   L +L 
Sbjct: 862 LLSCFVFQDNCSAP-KLSSELQTCLSELH 889


>gi|71030882|ref|XP_765083.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68352039|gb|EAN32800.1| hypothetical protein TP02_0517 [Theileria parva]
          Length = 1012

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/905 (42%), Positives = 557/905 (61%), Gaps = 49/905 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            AK Y F LD FQ+ S+  LER+ESVLV AHTSAGKT VAEYAIAM  RD  R+IYTSP+
Sbjct: 100 FAKKYPFTLDEFQKRSIESLERDESVLVCAHTSAGKTVVAEYAIAMGLRDGHRIIYTSPI 159

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR L  EF DVGLMTGDVTL+PNAS +VMTTEILR MLYRGSE+++E+  VIF
Sbjct: 160 KALSNQKYRNLSDEFVDVGLMTGDVTLNPNASVMVMTTEILRSMLYRGSEIVQEMKCVIF 219

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HYM+D ERGVVWEE+II +P  + +VFLSAT+ N  +F+EWI  + + PC+V+ TD+
Sbjct: 220 DEVHYMRDLERGVVWEETIILIPNKVNLVFLSATIPNYLEFSEWITRIKRIPCNVISTDY 279

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG--KASGRMA 306
           RP PL HY++  G  G+YL++DE   F+  N+ K          GG + N   K +    
Sbjct: 280 RPVPLNHYLYMSGAEGIYLILDENNNFKSTNYNKCLS-------GGSQSNSRDKETSSRD 332

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
           K    S   DI  IVK+  ++   P I+FSFS+ +CE  A ++  LD  + EEK  ++++
Sbjct: 333 KRRITSTFKDIENIVKLCFDKNLTPCIIFSFSKSDCETSATAVRHLDMTSDEEKKLIDEI 392

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           ++NA+  L+E+DR LP    MLPLLK+GI +HH GLLP+IKE++E+LFQE L+K LF+TE
Sbjct: 393 YKNAMATLSEQDRLLPQNLFMLPLLKKGIGIHHGGLLPIIKEIIEILFQESLLKVLFSTE 452

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TF+MGLNMPAKTVVFT +KKWDG   RYI SGEYIQM+GRAGRRG D  G+ IIM+D+  
Sbjct: 453 TFSMGLNMPAKTVVFTKMKKWDGREVRYISSGEYIQMAGRAGRRGLDTIGVVIIMLDKSD 512

Query: 487 EM--NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            +    +K + LGKP  L STF L Y  +LNLM R E   T E++I+ SF QFQ +    
Sbjct: 513 VLIDEEVKKIFLGKPLNLDSTFHLGYNMLLNLM-RIEDT-TPEYLIERSFMQFQVKNKSV 570

Query: 545 DIGKKVS----KLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
           +I  K+     KLE   +  D+     ++     K  + +L +K    +    + L YL 
Sbjct: 571 EISSKLKESKIKLETLRSEFDSGLFLHMSSLEDNKEKLEKLTEKSSDIVMSDTKSLNYLN 630

Query: 601 SGRLIKVREGGTDWGWGVVVN-------------------VVKKPSAGVGTLPS--RGGG 639
            GRL+ V+     WGW + ++                   + ++   G    PS  R  G
Sbjct: 631 YGRLVYVKNDQI-WGWAICISPPKLKLNNPKNLKRYYFDCLYQERMKGDVVYPSTERTWG 689

Query: 640 YIVPVQLPL--ISTLSKIRLSV--PPDLRPLDARQSILLAVQELESRFPQGL---PKLNP 692
                 LP+  I  +S++R+++    D    + + S++   ++L S+  Q L   P L+P
Sbjct: 690 RFEVKALPIDTIKKMSQVRITIHEKVDTESQNFQNSMINKFEQL-SKHIQTLGQFPLLHP 748

Query: 693 VKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKM 751
           V+ MKI +P++  L+++++ L +++ A PL   +D   +   F   + V  E ++L++++
Sbjct: 749 VEHMKINNPDLTTLLSEMDRLMNEINASPLPLREDYKDLSSRFSEYSRVRKETEELETQL 808

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           ++      +DEL++   VL+KL ++D  G V +KGR AC I+  DELLV+EL     F +
Sbjct: 809 KECTQIIMKDELRHMKSVLRKLEYVDQFGTVTIKGRIACEINATDELLVSELFLRNFFEN 868

Query: 812 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
           ++   + A  SC +  D+   +    ++L +   +++E A +I ++  +C + V+  EYV
Sbjct: 869 MEPEHICASLSCLVNDDRKEGKPPTELKLIEAYNKIREIATEIVDVMIDCGIVVDEAEYV 928

Query: 872 ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
            + +RP LM V+Y W+KG  F E++  + +FEGS+IR  RRLDE L QL  A++ +G + 
Sbjct: 929 -NRLRPTLMSVVYRWAKGDPFIEILADSSVFEGSVIRCIRRLDELLRQLACASRNIGNMT 987

Query: 932 LEKKF 936
           +E+ F
Sbjct: 988 MEQIF 992


>gi|71747848|ref|XP_822979.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70832647|gb|EAN78151.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
           brucei strain 927/4 GUTat10.1]
          Length = 950

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/936 (41%), Positives = 566/936 (60%), Gaps = 58/936 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQR S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 23  AMTFPYELDAFQRDSINALENGDSVLVSAHTSAGKTTVALYAIAKAVREKKRVIYTSPIK 82

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE   +F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 83  ALSNQKFREFTDKFDSVGLMTGDTTIKVDSDCLVMTTEILRSMLYRGTEMLREVGCVVFD 142

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK-QPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FAEW+  +H     HV++TD+
Sbjct: 143 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFAEWVESIHPGTKVHVIHTDY 202

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL HYV+P G  G++L+VDE  +FREDNF +   +      GG   NG  S  +A  
Sbjct: 203 RPVPLHHYVYPCGADGIFLIVDELGKFREDNFRRAMASVGAGNKGGD-ANGAESTEVAAA 261

Query: 309 GSGSGGS------DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             G   S       I +I+K++M R   P+IVFSF++ ECE++A+++SKL+FN  EE   
Sbjct: 262 SRGKQRSMRKSTEPIMEIIKLVMNRNMYPIIVFSFAKAECERNALALSKLNFNNTEEDAL 321

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           V +VF NA++CL  EDR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE+LFQ GLVK L
Sbjct: 322 VTEVFNNAMECLATEDRKLPAIEHLLPLLKRGVGIHHSGLLPILKEVVEILFQAGLVKVL 381

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           F+TETF+MGLNMPA+TVVFT+VKK+DG+++RY+  GEYIQMSGRAGRRG D  G+ I MV
Sbjct: 382 FSTETFSMGLNMPARTVVFTSVKKFDGETNRYLTGGEYIQMSGRAGRRGLDRVGVVIAMV 441

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE +E   LK +  G    L S+F L+Y  +LNL+ R E     E +++ SF QFQ  + 
Sbjct: 442 DEAVEPEILKQVTGGGADVLNSSFHLTYNMVLNLL-RVE-DVDPEFMMRRSFAQFQRLRN 499

Query: 543 LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
            P +  K  +L ++  S+    E    +Y   +  + +  K++   + +P  +  +  +G
Sbjct: 500 RPALEMKAEELTKDITSICVEHEEMFRQYAHCQEQLEKKRKQIGDFLKQPVFIRRFTNTG 559

Query: 603 RLIKVREG--GTDWGWGV------------------------VVNVVKKPSAGVGTLP-- 634
           RL+++R    G  + WG+                        V+     PS     +P  
Sbjct: 560 RLLRIRRSTDGALFNWGICRSSRAKTSNADEKDPSSFSVDALVICRKADPSQPTQLVPCH 619

Query: 635 ------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
                 +    Y V      I  +S+ R+++P DL    +R  ++ ++++L       +P
Sbjct: 620 VKDHTINTADLYTVTFDFTDIEAVSRFRVNLPADLDSASSRAEVIQSLEKLYKNHGDDVP 679

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHK-----LFAHPLNKSQDENQIRCFQRKAEVNHE 743
            L   +++ ++DP+   L  Q+  +E +     L  +P      E     F+++A +  E
Sbjct: 680 LLTS-EELGVKDPKFKKLCEQLGNIEKQVQKCELVCNPTEAL--EADYESFKKRANLERE 736

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVT 801
           +  +K ++       F DELK   RVL++L +ID D ++  K R AC I T D  ELL+T
Sbjct: 737 LDAIKQELDQVTQAIFSDELKKMMRVLRRLDYIDKDNIILRKARVACEITTSDENELLLT 796

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           EL+F G  N ++   + AL SC + V ++ +  +L  E  +PL  L E   +IA +  E 
Sbjct: 797 ELLFKGVLNSMETEMIVALMSCLVNVHRTPDGFSLPEEFRQPLNDLNEIVNRIATLSIES 856

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            +    +  VE T+ P LM+V Y W+KGA F++++  T+ +EG I+R  RRL+E L Q+ 
Sbjct: 857 GI-TQENTSVEKTM-PSLMEVTYLWAKGAKFSDIVTKTNAYEGDIVRMMRRLEEQLRQMA 914

Query: 922 AAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+  A+G + L  KF    + ++R I+F++SLYL
Sbjct: 915 GAARSPAIGCMELHDKFLKGIQLIKRDIVFASSLYL 950


>gi|261332826|emb|CBH15821.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 950

 Score =  702 bits (1811), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/936 (41%), Positives = 565/936 (60%), Gaps = 58/936 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQR S+  LE  +SVLVSAHTSAGKT VA YAIA A R+K+RVIYTSP+K
Sbjct: 23  AMTFPYELDAFQRDSINALENGDSVLVSAHTSAGKTTVALYAIAKAVREKKRVIYTSPIK 82

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE   +F  VGLMTGD T+  ++ CLVMTTEILR MLYRG+E+L+EV  V+FD
Sbjct: 83  ALSNQKFREFTDKFDSVGLMTGDTTIKVDSDCLVMTTEILRSMLYRGTEMLREVGCVVFD 142

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK-QPCHVVYTDF 248
           E+HYM+D+ RGVVWEE+I  LP   + VFLSAT+ NA +FAEW+  +H     HV++TD+
Sbjct: 143 EVHYMRDKSRGVVWEETISLLPEGCQYVFLSATIPNAREFAEWVESIHPGTKVHVIHTDY 202

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL HYV+P G  G++L+VDE  +FREDNF +   +      GG   NG  S  +A  
Sbjct: 203 RPVPLHHYVYPCGADGIFLIVDELGKFREDNFRRAMASVGAGNKGGD-ANGAESTEVAAA 261

Query: 309 GSGSGGS------DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             G   S       I +I+K++M R   P+IVFSF++ ECE++A+++SKL+FN  EE   
Sbjct: 262 SRGKQRSMRKSTEPIMEIIKLVMNRNMYPIIVFSFAKAECERNALALSKLNFNNTEEDAL 321

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           V +VF NA++CL  EDR LPAIE +LPLLKRG+ +HHSGLLP++KE+VE+LFQ GLVK L
Sbjct: 322 VTEVFNNAMECLATEDRKLPAIEHLLPLLKRGVGIHHSGLLPILKEVVEILFQAGLVKVL 381

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           F+TETF+MGLNMPA+TVVFT+VKK+DG+++RY+  GEYIQMSGRAGRRG D  G+ I MV
Sbjct: 382 FSTETFSMGLNMPARTVVFTSVKKFDGETNRYLTGGEYIQMSGRAGRRGLDRVGVVIAMV 441

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE +E   LK +  G    L S+F L+Y  +LNL+ R E     E +++ SF QFQ  + 
Sbjct: 442 DEAVEPEILKQVTGGGADVLNSSFHLTYNMVLNLL-RVE-DVDPEFMMRRSFAQFQRLRN 499

Query: 543 LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
            P +  K  +L ++  S+    E    +Y   +  + +  K++   + +P  +  +  +G
Sbjct: 500 RPALEMKAEELTKDITSICVEHEEMFRQYAHCQEQLEKKRKQIGDFLKQPVFIRRFTNTG 559

Query: 603 RLIKVREG--GTDWGWGV------------------------VVNVVKKPSAGVGTLPSR 636
           RL+++R    G  + WG+                        V+     PS     +P  
Sbjct: 560 RLLRIRRSTDGALFNWGICRSSRAKTSNADEKDPSSFSVDALVICRKADPSQPTQLVPCH 619

Query: 637 GGG--------YIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
                      Y V      I  +S+ R+++P DL    +R  ++ ++++L       +P
Sbjct: 620 VKDHTINTVDLYTVTFDFTDIEAVSRFRVNLPADLDSASSRAEVIQSLEKLYKNHGDDVP 679

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHK-----LFAHPLNKSQDENQIRCFQRKAEVNHE 743
            L   +++ ++DP+   L  Q+  +E +     L  +P      E     F+++A +  E
Sbjct: 680 LLTS-EELGVKDPKFKKLCEQLGNIEKQVQKCELVCNPTEAL--EADYESFKKRASLERE 736

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD--ELLVT 801
           +  +K ++       F DELK   RVL++L +ID D ++  K R AC I T D  ELL+T
Sbjct: 737 LDAIKQELDQVTQAIFSDELKKMMRVLRRLDYIDKDNIILRKARVACEITTSDENELLLT 796

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           EL+F G  N ++   + AL SC + V ++ +  +L  E  +PL  L E   +IA +  E 
Sbjct: 797 ELLFKGVLNSMETEMIVALMSCLVNVHRTPDGFSLPEEFRQPLNDLNEIVNRIATLSIES 856

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            +    +  VE T+ P LM+V Y W+KGA F++++  T+ +EG I+R  RRL+E L Q+ 
Sbjct: 857 GI-TQENTSVEKTM-PSLMEVTYLWAKGAKFSDIVTKTNAYEGDIVRMMRRLEEQLRQMA 914

Query: 922 AAAQ--AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+  A+G + L  KF    + ++R I+F++SLYL
Sbjct: 915 GAARSPAIGCMELHDKFLKGIQLIKRDIVFASSLYL 950


>gi|449015379|dbj|BAM78781.1| probable nuclear exosomal RNA helicase MTR4 [Cyanidioschyzon merolae
            strain 10D]
          Length = 1046

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/944 (41%), Positives = 566/944 (59%), Gaps = 54/944 (5%)

Query: 37   SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
            +CVH V++P+  +      +      P      AK + F LD FQ  +  CLE  ESV+V
Sbjct: 132  ACVHTVSIPASLSEYDSSKLS---VWPPKGRPPAKEFPFALDLFQIEACKCLEAGESVMV 188

Query: 97   SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
            +AHTSAGKTA+AEYAIA++ R+ +RVIYTSP+KALSNQKYRE   EF DVGL+TGDVTL+
Sbjct: 189  AAHTSAGKTAIAEYAIALSLREHRRVIYTSPIKALSNQKYREFQSEFNDVGLITGDVTLN 248

Query: 157  PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            PNASCL+MTTEILR MLYRGS+V++E AWVIFDE+HYM+DRERGVVWEESII LP +++ 
Sbjct: 249  PNASCLIMTTEILRSMLYRGSDVVREAAWVIFDEVHYMRDRERGVVWEESIILLPDSVRF 308

Query: 217  VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
            VFLSAT+ NA +FAEWI  LH+ PCH VYT+ RP PL+H+        L L+ DE  +F 
Sbjct: 309  VFLSATIPNAEEFAEWIVALHQAPCHTVYTEKRPVPLRHFALSNQEDRLVLLKDEGGRFY 368

Query: 277  EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
              NF +     +++ +   R  G + GR          ++  KI++  +++  QP+IVFS
Sbjct: 369  RKNFER-----IRKDLRIDRFRGPSRGRTL------SNAEFRKIIRFAIDQDLQPMIVFS 417

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FSR++CE  A  +S +D N +EEK  VE V+QNA+  LN +D+ L  I  ML +LKRG+ 
Sbjct: 418  FSRKDCEALARCISGMDLNGEEEKALVENVYQNAMATLNSQDQQLDQIGTMLEMLKRGVG 477

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHHSGL P++KE+VE+LFQEGLVK L ATETF++GLNMPA+ V FTA+KK+DG + RYI 
Sbjct: 478  VHHSGLFPIVKEIVEILFQEGLVKVLLATETFSLGLNMPARMVFFTALKKFDGRNVRYIT 537

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            SGEYIQMSGRAGRRG D+RGI I+ +++    + L+ ++ G+P  L S FRL Y  +LNL
Sbjct: 538  SGEYIQMSGRAGRRGLDERGIVILRLEDDTNEDCLRRILSGRPDELTSAFRLGYNMLLNL 597

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG-EAEVAEYHKLK 575
                E +   E ++  SF QFQ  K   +   ++  LE E   +  +  E EV +++KL 
Sbjct: 598  QRSEESR--PEQIMVRSFAQFQAVKRAENAVAELENLEAEMKQMHFTHEEEEVEQFYKLN 655

Query: 576  LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPS 635
              +A++++ + S   R E V  +L +GRL+K+R+   D  W VV++           LP+
Sbjct: 656  QRLAEIDRNI-SRYYRCENVDLFLKNGRLLKLRD---DQHWSVVMD------PKCCGLPN 705

Query: 636  RGGGYIV------------PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF 683
            +  G+ V             +Q  LI  +S + + +P  +    +R  I   VQ  E  +
Sbjct: 706  KTHGFSVFRRKVDGVWRLQNLQRSLIQLISAVCIEMPETVDTEMSRSIISERVQSAERHY 765

Query: 684  PQ---GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEV 740
                 GLP L+P+ D  I +  +  L+++   L  ++     +K +    I+ +  + ++
Sbjct: 766  ASVGGGLPLLDPIYDFGIREKSLRALMHERRCLVQEMRKCAASKPELHEDIKLYGLRLQL 825

Query: 741  NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
              + ++++  +R         EL+  +RVL  LG++D +  +  KGR  C I   +EL++
Sbjct: 826  APQAEKIQRDLRVRSHLIHAAELEAMNRVLHALGYLDENKQLSPKGRVCCEISAANELIL 885

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKS-------SEQINLRMELAKPLQQLQESARK 853
            TE +F G   D+    + A+ S F+  +K+       +E  ++R  L K  Q +     +
Sbjct: 886  TECIFEGILRDMPEPLIPAILSGFVLDEKAKDSQMAVAEDADIREHLQKVQQDIHRVVGR 945

Query: 854  IAEIQNECKLEVNVDEYV--ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            IA +Q +  L     EYV  E    P ++  I+ W KG  F+E +++  +FEGS+IR  R
Sbjct: 946  IARVQRDAGLRW---EYVCEEPNWDPNIISAIHAWCKGQPFSEALKLAKVFEGSLIRCMR 1002

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            R+DE L QLR A  +VG+  L  KFA +S  L R I+F+ SLYL
Sbjct: 1003 RVDEVLQQLRNAVDSVGDAALSAKFAQSSALLHRDIVFAASLYL 1046


>gi|15928685|gb|AAH14810.1| Skiv2l2 protein, partial [Mus musculus]
          Length = 725

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/734 (47%), Positives = 487/734 (66%), Gaps = 42/734 (5%)

Query: 255 HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG 314
           HY+FP GG GL+LVVDE   FREDNF          +  G    G   GR  KGG+  G 
Sbjct: 1   HYIFPAGGDGLHLVVDENGDFREDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGP 54

Query: 315 SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
           S++FKIVKMIMER FQPVI+FSFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL
Sbjct: 55  SNVFKIVKMIMERNFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCL 114

Query: 375 NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
           ++ED+ LP +E +LPLLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NM
Sbjct: 115 SDEDKKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINM 174

Query: 435 PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
           PA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K +
Sbjct: 175 PARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQL 234

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
           + G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P + +KV   E
Sbjct: 235 LKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSE 292

Query: 555 EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
           E+   +    E  V  Y+K++  +A+L K++   I +P+  L +L  GRL+KV+  G D+
Sbjct: 293 EQYNKIVIPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDF 352

Query: 615 GWGVVVNVVKKP----------------------------SAGVGTLPS----RGGGYIV 642
           GWGVVVN  KK                             SA     P+    +G   +V
Sbjct: 353 GWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVV 412

Query: 643 PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
           PV + L+S +S +RL +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  
Sbjct: 413 PVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQRRFPDGVPLLDPIDDMGIQDQG 472

Query: 703 VVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
           +  ++ ++E  EH++++HPL N    E      +RKA++  +I+  K +++ ++     D
Sbjct: 473 LKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCERKAQIALDIKSAKRELKKARTVLQMD 532

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
           ELK R RVL++LG   +  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  AL 
Sbjct: 533 ELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSSEQATALL 592

Query: 822 SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
           SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMD
Sbjct: 593 SCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMD 651

Query: 882 VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
           V+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA    
Sbjct: 652 VVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGIT 711

Query: 942 SLRRGIMFSNSLYL 955
            ++R I+F+ SLYL
Sbjct: 712 KIKRDIVFAASLYL 725


>gi|256081919|ref|XP_002577214.1| helicase [Schistosoma mansoni]
          Length = 1033

 Score =  680 bits (1755), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/1015 (38%), Positives = 588/1015 (57%), Gaps = 134/1015 (13%)

Query: 38   CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
            C+HEV  P+  AL + +      A+P      A+ Y F LDPFQ+ ++ C+E  +SV+VS
Sbjct: 56   CIHEVVYPADCALNELK----NLAHP------ARNYPFTLDPFQQRAILCIENEQSVMVS 105

Query: 98   AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
            AHTSAGKT VAEYA+A +    QRVIYT+P+KALSNQK+RE  + FKDVGLMTGD+T++ 
Sbjct: 106  AHTSAGKTVVAEYAVAKSLNQNQRVIYTTPIKALSNQKFREFSEIFKDVGLMTGDITINQ 165

Query: 158  NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
             A+ L+MTTEILR MLYR S+V +EV WVIFDEIHYM+++ERGV+WEE+II LP ++ +V
Sbjct: 166  EATVLIMTTEILRSMLYRSSDVTREVGWVIFDEIHYMREKERGVIWEETIILLPDSVGLV 225

Query: 218  FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
            FLSAT+ NA +FAEWI  LH++PCHVVYTD RP PLQHYV+P GG G++LVV++  +F E
Sbjct: 226  FLSATIPNAREFAEWIVFLHRKPCHVVYTDCRPVPLQHYVYPCGGDGIHLVVNQNREFIE 285

Query: 278  DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
             NF  L    L+   G    + K+ GR   GGS        K+VK++M++  +P+IVFSF
Sbjct: 286  SNF-NLALNTLQNAAGNSISDTKSRGR--NGGSTRPQPYCSKLVKLVMDQNLEPLIVFSF 342

Query: 338  SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
            S+ +CE +AM ++K+DF+T+ EK  +E V                  +++LP+L+RGI +
Sbjct: 343  SKMDCEFYAMQLNKMDFSTESEKAAIELV------------------QILLPVLRRGIGI 384

Query: 398  HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
            HH GLLP++KE+VE+LF EG +K L+ATETFAMGLNMPA++V+FT+ +K+DG   R +  
Sbjct: 385  HHGGLLPILKEIVEVLFAEGFIKVLYATETFAMGLNMPARSVLFTSTRKFDGRDFRLLSP 444

Query: 458  GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            GEYIQMSGRAGRRGKD RG  I+M+D+++  +  + ++LG+P  L S+F L+   ILNL+
Sbjct: 445  GEYIQMSGRAGRRGKDTRGTVIMMLDDRISADEARRLLLGEPDRLDSSFYLTNNMILNLL 504

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE---YHKL 574
             R E     E ++  +F QFQ    LP + K+++  E    ++    + ++ +   Y KL
Sbjct: 505  -RVE-DINPEIMLVKNFQQFQCRSELPYLEKRLNDTESLIKNICFPEDIDMGQLGAYVKL 562

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE-GGTDWGWGVVVNV----------- 622
               +A  E +  + +++ + V+ +  +GR++++R     D+GWG+VV+V           
Sbjct: 563  HHAVAVCEAERWALVSQRKSVIPFFQAGRVVRIRNLDDWDFGWGIVVHVDRSDSPITHSG 622

Query: 623  --------------------------VKKPSAGVGTLPSRGGGY----------IVPVQL 646
                                       +KP       P+ G  +          +V V L
Sbjct: 623  HQKSNRMSVICLMEVAEDHILRNSDSTRKPIPFSFVKPADGVDFQTDTFTSVIQLVSVPL 682

Query: 647  PLISTLSKI--------------------RLSVPPDLRPLDARQSILLAVQELESRFPQG 686
              +S +S +                    +LSV PD      ++ I   V   +++    
Sbjct: 683  DCLSGISSVCLKLNSLLECDNQNTEQLCNKLSVQPD----HVKRRIWEGVDRAKAKLGGI 738

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQ 745
            LP L+P+KD+ I+D  V      I  L+ ++  +P++K  D ++ I  F  KA    +++
Sbjct: 739  LPVLDPIKDLNIKDDRVKQQCEAINLLKARMAMNPISKRADLDSLIDRFNWKASNLRKLE 798

Query: 746  QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
             ++ ++  +      DEL+ R R+L++L     D  V LKGR AC I TGDEL++TEL+ 
Sbjct: 799  DIRERISRTDSLSHFDELRARKRLLRRLCFCSEDDTVALKGRIACEISTGDELMLTELLL 858

Query: 806  NGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQESARKIAEIQNECKLE 864
            +G F+     Q+A + SCF+   ++    INL   + K ++ + + AR +A++  EC + 
Sbjct: 859  DGFFSQFSPVQLAGVMSCFVAEKQTKHHMINLSPVMKKAIKTIHDKARYLAKMSAECNIN 918

Query: 865  V---NVDEYVESTVRPF---------------------LMDVIYCWSKGATFAEVIQMTD 900
                N ++ + + V+                       LMDV+  W++G +F+ + ++T 
Sbjct: 919  TGHSNSEKQLTTLVQNLENNRNNLLDDEQAYVDRFVGDLMDVVCAWAEGVSFSRLCELTS 978

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             FEGS+IR  RRL+E L Q+  AA+  G   LE KF  A   ++R I+F  SLYL
Sbjct: 979  AFEGSVIRCIRRLEELLCQMHNAAKVAGNSELENKFLEAVILIKRDIIFCASLYL 1033


>gi|26346947|dbj|BAC37122.1| unnamed protein product [Mus musculus]
          Length = 616

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/579 (58%), Positives = 414/579 (71%), Gaps = 47/579 (8%)

Query: 3   ESLMAGKRKAPEEDLHVTGTPEEESTKKQR-----------------------NLTRSCV 39
           ES   GK K    DL V GT E    KK R                            C 
Sbjct: 53  ESARGGKNK---RDLDVEGTDEPIFGKKPRIEDSINEDLSLADLMPRVKVQSVETVEGCT 109

Query: 40  HEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVLVS
Sbjct: 110 HEVALPADEDYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVLVS 158

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P
Sbjct: 159 AHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINP 218

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
            ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  V
Sbjct: 219 TASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVHYV 278

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE   FRE
Sbjct: 279 FLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
           DNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+FSF
Sbjct: 339 DNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVIIFSF 392

Query: 338 SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
           S+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +
Sbjct: 393 SKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRGIGI 452

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I S
Sbjct: 453 HHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISS 512

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           GEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+
Sbjct: 513 GEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 572

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
            R E +   E++++ SF+QFQ+ +A+P + +KV   EE+
Sbjct: 573 -RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQ 609


>gi|270004784|gb|EFA01232.1| hypothetical protein TcasGA2_TC010559 [Tribolium castaneum]
          Length = 1126

 Score =  671 bits (1730), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/583 (55%), Positives = 430/583 (73%), Gaps = 27/583 (4%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           SC HEVA P G   T  +   G         E AKTY F LD FQ+ S+ C++ N+SVLV
Sbjct: 88  SCTHEVACPPGQEYTPLKTCRG---------EPAKTYPFVLDSFQKESILCVDNNQSVLV 138

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA++ ++KQRVIYT+P+KALSNQKYRE   EFKDVGL+TGDVT++
Sbjct: 139 SAHTSAGKTVIAEYAIALSLKNKQRVIYTTPIKALSNQKYREFLDEFKDVGLITGDVTIN 198

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P+ASCL+MTTEILR MLYRGSEV++EV WV+FDEIHYM+D+ERGVVWEE++I LP  +  
Sbjct: 199 PSASCLIMTTEILRNMLYRGSEVMREVGWVVFDEIHYMRDKERGVVWEETLILLPHNVHF 258

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA QFAEW+ HLH QPCHVVYTD+RPTPLQH+++P GGSG+++VVDE   F+
Sbjct: 259 VFLSATIPNARQFAEWVAHLHDQPCHVVYTDYRPTPLQHFIYPAGGSGIHMVVDETGTFK 318

Query: 277 EDNF----VKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMIMERKF 329
           +D++      LQ++       G    G   GR  +GG     +  +DIFK++KMIMER F
Sbjct: 319 DDSYNAAMAVLQNS-------GDAAKGDEKGR--RGGIKNKDATQTDIFKVIKMIMERNF 369

Query: 330 QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
            PVIVFSFS+++CE  AM M+KLDFNT  EK  V++VF NA+D L+++DR+LP +E +LP
Sbjct: 370 APVIVFSFSKKDCEVFAMQMTKLDFNTTAEKHLVDEVFNNAMDVLSDDDRHLPQVENLLP 429

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           LL+RGI +HH GLLP++KE +E+LF EGL+KALFATETFAMGLNMPA+TV+FT ++K+DG
Sbjct: 430 LLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATETFAMGLNMPARTVLFTGMRKFDG 489

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
             +R+I SGEYIQMSGRAGRRG DD+GI I+MVDE++     +++V G P P+ S F L+
Sbjct: 490 HEYRWITSGEYIQMSGRAGRRGLDDKGIVILMVDEKVPPAAGRNIVKGLPDPINSAFHLT 549

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
           Y  +LNL+ R E +   E++++ SF+QFQ + A+P +  K  +  EE  +L    E ++A
Sbjct: 550 YNMVLNLL-RVE-EINPEYMLERSFYQFQNQTAIPGLYDKYKEKLEEFNNLQIESEPQIA 607

Query: 570 EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
            YH ++ ++ +L  +  S +T+P  ++ +L  GRL+K   G T
Sbjct: 608 SYHTIRQELDKLGLQFRSYLTKPNYLIPFLQPGRLVKEAMGKT 650



 Score =  270 bits (689), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 214/321 (66%), Gaps = 2/321 (0%)

Query: 636  RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKD 695
            +G   IV V+  LI+ +S +RL  P DLR  D R+ +  +++E++ RFP+G P LNP+ D
Sbjct: 807  KGEVEIVSVESTLITHISTVRLYCPNDLRQKDTRKGVYKSIKEVKKRFPEGPPLLNPIDD 866

Query: 696  MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDEN-QIRCFQRKAEVNHEIQQLKSKMRDS 754
            MKI + + VD+V +IE+LE K++ HPL+K    N +   +++K +   E+   + K+ ++
Sbjct: 867  MKITESDFVDIVKKIEQLEKKMYDHPLHKHSLLNTEYEKYEQKVKCKEELAVARQKLLEA 926

Query: 755  QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
            +     DELK R RVL++LG+     V+QLKGR AC + + DELL+TE++FNG F +L  
Sbjct: 927  KSVLQLDELKCRKRVLRRLGYCTNTDVIQLKGRVACELSSADELLITEMIFNGVFGNLSP 986

Query: 815  HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
             Q  AL S F+  +KS+E   L  EL+ PL+Q+Q+ AR+IA++  E +L ++ D YVE  
Sbjct: 987  AQACALLSTFVCDEKSNEMPKLSEELSGPLRQMQDLARRIAKVSTEARLPLDEDAYVER- 1045

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
             +P LMDV++ W  G++F+++ +MT+IFEGSI+R  RRL+E L Q+  A++ +G  +LE 
Sbjct: 1046 FKPGLMDVVFSWCNGSSFSDLCKMTEIFEGSIVRCMRRLEELLRQMIQASKTIGNTDLED 1105

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            KF  A + ++R I+FS+SLYL
Sbjct: 1106 KFNTAIKVIKRDIIFSSSLYL 1126


>gi|401887124|gb|EJT51129.1| hypothetical protein A1Q1_07724 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 981

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/975 (41%), Positives = 550/975 (56%), Gaps = 173/975 (17%)

Query: 34  LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
           L     H+VA+P G+        H     P      A+TY FELDPFQ V+ +C+ER+E+
Sbjct: 127 LVHEVRHQVAIPPGFPYVPISQ-HKRLDPP------ARTYKFELDPFQYVATSCIERSET 179

Query: 94  VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTG 151
           VLVSAHTSAGKT VAE+AIA A +   RV+YTSP+K     K+R+  ++F  ++VGLMTG
Sbjct: 180 VLVSAHTSAGKTVVAEFAIATALKSGMRVVYTSPIK-----KFRDFQEDFGQENVGLMTG 234

Query: 152 DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
           DVT++P ASCLVMTTE++R           EV WVIFDE+HYM+D+ERGVVWEE++I LP
Sbjct: 235 DVTINPTASCLVMTTEVMR-----------EVGWVIFDEVHYMRDKERGVVWEETLILLP 283

Query: 212 PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
             ++ VFLSAT+ N+ +FAEW C  H+QPCH+VYTDFRPTPLQHY+FP G  G+YLVVDE
Sbjct: 284 HKVRCVFLSATIPNSMEFAEWWCQTHEQPCHIVYTDFRPTPLQHYLFPAGSEGIYLVVDE 343

Query: 272 KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGG--------SDIFKIVKM 323
           +  FREDNF K           G+ E+             +          SDI+KIVK+
Sbjct: 344 RSNFREDNFQKAMAAL----AAGQGEDPADPNSGRNKKGKTKKGGAMKGGVSDIYKIVKL 399

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           IM R   PVI+F+FS+RECE  AM MSKLDFNT++E  TV+QVF+NA+  L+E+DR LP 
Sbjct: 400 IMSRNLNPVIIFAFSKRECEALAMQMSKLDFNTEDEAATVQQVFENAIGALSEDDRKLPQ 459

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           IE +LPLLKRGI +HH GLLP++KE++E+LFQEGL+KALFATETF++GLNMPAKTVVFT+
Sbjct: 460 IEQILPLLKRGIGIHHGGLLPILKEVIEILFQEGLLKALFATETFSIGLNMPAKTVVFTS 519

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
           V+K+DG   R +  GEYIQMSGRAGRRG D RGI I+M DE++E    K MV G+   L 
Sbjct: 520 VRKFDGKEFRTLSGGEYIQMSGRAGRRGLDARGIVIMMCDEKIEPEAAKGMVKGQADRLD 579

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
           S F L Y  I+NLM R EG  + E++++  F+QFQ   ++P + K++   EEE   +   
Sbjct: 580 SAFHLGYNMIINLM-RVEG-ISPEYMLERCFYQFQNSLSVPVLEKQLKAAEEERDEIKIE 637

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV--- 620
            E ++AEY+ L+  +  LE    S IT P+ VL ++  GR++++R+GG D+GW VVV   
Sbjct: 638 DEDDIAEYYDLRDQLKVLEGDFKSVITHPQYVLPFMQPGRMVEIRDGGRDFGWAVVVGYN 697

Query: 621 ------------------------NVVKKPSAGV---------GTLP----SRGGGYIVP 643
                                   +V+ K ++G          G  P      G   I+ 
Sbjct: 698 KVVNPKGRPPIVTENDPPQKGYVIDVLVKVASGSQVPRDKNAEGIQPPGPGDNGETAIIG 757

Query: 644 VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
           V L  +  +S +RL +P DLR    + +   AV E++ RFP+G+  L+PV +M I+D   
Sbjct: 758 VLLSTVQAVSTVRLHLPKDLRSQSDKDTAFRAVNEVKKRFPKGIALLDPVVNMGIKDDSF 817

Query: 704 VDLV-NQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDE 762
             LV ++I+ L       P+  S D       Q+  E + + + + S+  ++++ K R+E
Sbjct: 818 KKLVKDRIQTL-------PITSSPD-----LPQKYDEYDRKQKAIASEKSEAKV-KIREE 864

Query: 763 LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
           L    RVL            Q   R    +    ++ V E  +  +F             
Sbjct: 865 LAAPLRVL------------QETARRIAKVSNESKIPVVEDEYVQSF------------- 899

Query: 823 CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
                         ++E+ +P+ Q  + A   AE+   CKL    D Y  S +R F    
Sbjct: 900 --------------KVEMMEPVLQWCKGA-SFAEL---CKL---TDVYEGSIIRCF---- 934

Query: 883 IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
                                       RRL E L Q+  AA A+G   LE+KF  A E 
Sbjct: 935 ----------------------------RRLQELLRQMGQAANAIGNKELEEKFTKALEM 966

Query: 943 LRR--GIMFSNSLYL 955
           L +   I+FS SLYL
Sbjct: 967 LEKPNSIIFSPSLYL 981


>gi|218186663|gb|EEC69090.1| hypothetical protein OsI_37983 [Oryza sativa Indica Group]
          Length = 776

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/788 (45%), Positives = 501/788 (63%), Gaps = 57/788 (7%)

Query: 211 PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
           P   + VFLSAT+ NA +FA+W+  +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVD
Sbjct: 3   PKNSRFVFLSATVPNAKEFADWVAKVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVD 62

Query: 271 EKEQFREDNFVK-LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKF 329
           EK +FRED+F K L       +   +RENGK    +   G  S  SDIFK+VKMI++R++
Sbjct: 63  EKSKFREDSFQKGLNALVPASENDKKRENGKWQKGLL-TGKPSEDSDIFKMVKMIIQRQY 121

Query: 330 QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
            PVI+FSFS+RECE  AM M+K+D N  +EK  +E +F +A+D L+++D+ LP +  MLP
Sbjct: 122 DPVILFSFSKRECEFLAMQMAKMDLNDDDEKANIETIFWSAMDLLSDDDKKLPQVSNMLP 181

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           LLKRGI VHHSGLLP++KE++E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DG
Sbjct: 182 LLKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDG 241

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
           D  R++ SGEYIQMSGRAGRRG D RGICI+MVDE+ME +T K M+ G    L S F LS
Sbjct: 242 DRFRWLSSGEYIQMSGRAGRRGIDQRGICILMVDEKMEPSTAKMMLKGSADSLNSAFHLS 301

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
           Y  +LN +   +G    E ++++SF+QFQ ++ALPD+ K+V +LE E  S+    E  + 
Sbjct: 302 YNMLLNQIRCEDGD--PEKLLRHSFYQFQADRALPDLEKQVKELELERNSMIIEEEENLK 359

Query: 570 EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR----EGGT-----DWGWGVVV 620
            Y+ L      L+K +   +  P+ VL +L  GRL +V+    E  T     +  WGV +
Sbjct: 360 SYYDLLQQYKNLKKDVRDIVHSPKYVLPFLQPGRLARVQYSTDEQSTFSIDENITWGVTI 419

Query: 621 NV--------------------------VKKPSAGVGTL---PSRGGGYIVPVQLPL--I 649
           N                           V K  +G  T+   P +  G  V + LPL  I
Sbjct: 420 NFEKVKTHSEDRRPEDSDYTVDVLTRCSVSKDKSGKKTMKIIPLKDRGEPVVISLPLSQI 479

Query: 650 STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVN 708
             LS IR+ +P DL P++AR++ L  V E+ SRF + G+P L+P +DMK++         
Sbjct: 480 DGLSSIRMHIPKDLLPVEARENTLRKVDEVISRFAKDGIPLLDPEEDMKVQSSSFRKASR 539

Query: 709 QIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
           +IE LE     H + N    + +++    K E++ +I+ +K  MR S    F+DELK R 
Sbjct: 540 RIEALESLFEKHDVHNSPHIKQKLKVLHAKQELSAKIKAIKKTMRSSTALAFKDELKARK 599

Query: 768 RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
           RVL++LG+I ++ VV++KG+ AC I + DEL +TELMF+GT  D    Q+  L     P 
Sbjct: 600 RVLRRLGYITSEDVVEVKGKVACEISSADELTLTELMFSGTLKDATVEQMEKLQDAPKP- 658

Query: 828 DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
                    R EL     QLQE+AR++A +Q ECK++++V+ +V S  RP +M+ +Y W+
Sbjct: 659 ---------REELDLLFFQLQETARRVANLQLECKIQIDVESFVNS-FRPDIMEAVYSWA 708

Query: 888 KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
           KG+ F ++++MT +FEGS+IR+ RRL+E L QL  A++++GE  LE K   A   ++R I
Sbjct: 709 KGSKFYQIMEMTQVFEGSLIRAIRRLEEVLQQLILASKSIGETQLEAKLEEAVSKIKRDI 768

Query: 948 MFSNSLYL 955
           +F+ SLYL
Sbjct: 769 VFAASLYL 776


>gi|47219912|emb|CAF97182.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1262

 Score =  659 bits (1699), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/713 (49%), Positives = 446/713 (62%), Gaps = 132/713 (18%)

Query: 38  CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           C HEVA+P    Y   K              G+ AK Y F LDPFQ+  +  ++ N+ VL
Sbjct: 97  CTHEVALPVSDQYKPLKPRV-----------GKAAKEYPFILDPFQQDDILRIDNNDPVL 145

Query: 96  VSAHTSAGKTA-----------------------------------VAEYAIAMAFRDKQ 120
            +AHTSAGKTA                                   +++YAIA+A R+KQ
Sbjct: 146 GTAHTSAGKTAETKDVIFTSPIIALSIRKYMEMYDEFLDVGMHLLNLSKYAIALALREKQ 205

Query: 121 RVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVL 180
           RVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE++
Sbjct: 206 RVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIM 265

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
           +EVAWVIFDEIHYM+D ERGVVWEE+II LP  +  VFLSAT+ NA QFAEWICHLHKQP
Sbjct: 266 REVAWVIFDEIHYMRDAERGVVWEETIILLPDNVHYVFLSATIPNARQFAEWICHLHKQP 325

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF-VKLQDTFLKQKIGGRRENG 299
           CHVVYTD+RPTPLQHY+FP GG GL+LVVDE   FREDNF   +Q        GG    G
Sbjct: 326 CHVVYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFREDNFNTAMQVLRDAGDSGGASGGG 385

Query: 300 KASGRMAKGGSG-----------------------------SGGSDIFKIVKMIMERKFQ 330
           K   R  KGG+                              +G S +FKIVKMIMER FQ
Sbjct: 386 KWDPRGRKGGTKGLCVRNDKSCKCLYTVELPTSELHVDACCTGPSSVFKIVKMIMERNFQ 445

Query: 331 PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           PVI+FSFS++ECE +A+ ++KLDFN ++EK  VE+VF NAVDCL++ED+ LP +E +LPL
Sbjct: 446 PVIIFSFSKKECEAYALQVAKLDFNKEDEKRLVEEVFNNAVDCLSDEDKKLPQVEHVLPL 505

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVK---------------------------ALF 423
           LKRGI +HH GLLP++KE +E+LF EGL+K                           ALF
Sbjct: 506 LKRGIGIHHGGLLPILKETIEILFSEGLLKVQKLFFSFCCLVWTIKGGPNVLFFSSQALF 565

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATETFAMG+NMPA+TV+FT+ +K+DG SHR+I SGEYIQMSGRAGRRG DDRGI I MVD
Sbjct: 566 ATETFAMGINMPARTVLFTSARKFDGKSHRFITSGEYIQMSGRAGRRGMDDRGIVIFMVD 625

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           E+M     K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF+QFQ+ +AL
Sbjct: 626 EKMSPAVGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAL 683

Query: 544 PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
           P + +K+ K EE+  S++   +  V  Y K++  +A+L K++   I RP+  L +L  GR
Sbjct: 684 PGVVEKIKKYEEQYHSIEIPNQESVVTYFKIRQQLAKLGKEIQEFIHRPKYCLPFLQPGR 743

Query: 604 LIK-------------------------VREGGTDWGWGVVVNVVKKPSAGVG 631
           L+K                         V+    D+GWGVVVN  KK +  V 
Sbjct: 744 LVKVQPPRALALRARHPPPHASAPLSPQVKNEDADFGWGVVVNFNKKTNVKVS 796



 Score =  258 bits (660), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 138/376 (36%), Positives = 217/376 (57%), Gaps = 62/376 (16%)

Query: 641  IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ----------------------- 677
            +VPV + L+S LS +RL +P DL+PLD RQ +L ++Q                       
Sbjct: 888  VVPVMVQLLSALSSVRLYIPKDLKPLDNRQLMLKSIQVRPRRPFLTRNAEPRSAERAAPP 947

Query: 678  --ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCF- 734
              E++ RFP G+P L+PV DM I+D  +  ++ ++E  EH++++HPL+   +   +    
Sbjct: 948  PQEVQKRFPDGIPLLDPVDDMGIKDSALKKIIQKVEAFEHRMYSHPLHSDPNLESVYALC 1007

Query: 735  QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID- 793
            ++KA +  +I+  K +++ +Q     D+LK R RVL++LG      V+++KGR AC I  
Sbjct: 1008 EKKALIGADIRAAKRELKKAQTVLQMDQLKCRKRVLRRLGFASPSDVIEMKGRVACEISR 1067

Query: 794  ----------------------------------TGDELLVTELMFNGTFNDLDHHQVAA 819
                                              +GDELL+TE++FNG FNDL   Q  A
Sbjct: 1068 WAGAPAGLSQAFWDAGSEPPGLVYQPLTPRVCLPSGDELLLTEMIFNGLFNDLTVEQATA 1127

Query: 820  LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
            L SCF+  + +SE   L  +LA PL+Q+QE A++IA++  + KL+V+ + Y+ +  +P L
Sbjct: 1128 LLSCFVFQENASEMPKLTEQLAAPLRQMQECAKRIAKVSADAKLDVDEETYL-NQFKPHL 1186

Query: 880  MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            MDV++ W+ G+TFA++ +MTD+FEGSIIR  RRL+E L Q+ +AA+A+G   LE KFA  
Sbjct: 1187 MDVVFAWANGSTFAQICKMTDVFEGSIIRCMRRLEEVLRQMCSAAKAIGNTELENKFAEG 1246

Query: 940  SESLRRGIMFSNSLYL 955
               ++R I+F+ SLYL
Sbjct: 1247 ITKIKRDIVFAASLYL 1262


>gi|34783197|gb|AAH14669.2| SKIV2L2 protein, partial [Homo sapiens]
          Length = 706

 Score =  651 bits (1679), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/714 (46%), Positives = 471/714 (65%), Gaps = 42/714 (5%)

Query: 275 FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
           FRED F          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+
Sbjct: 2   FREDKFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVII 55

Query: 335 FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           FSFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRG
Sbjct: 56  FSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRG 115

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           I +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+
Sbjct: 116 IGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRW 175

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
           I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +L
Sbjct: 176 ISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVL 235

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
           NL+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V  Y+K+
Sbjct: 236 NLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVVIYYKI 293

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP-------- 626
           +  +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK         
Sbjct: 294 RQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGE 353

Query: 627 --------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPD 662
                               SA     P+    +G   +VPV + L+S +S +RL +P D
Sbjct: 354 LDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKD 413

Query: 663 LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
           LRP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL
Sbjct: 414 LRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPL 473

Query: 723 -NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V
Sbjct: 474 HNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDV 533

Query: 782 VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
           +++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA
Sbjct: 534 IEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLA 593

Query: 842 KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+
Sbjct: 594 GPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDV 652

Query: 902 FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 653 FEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 706


>gi|397640219|gb|EJK74000.1| hypothetical protein THAOC_04352, partial [Thalassiosira oceanica]
          Length = 946

 Score =  646 bits (1667), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/573 (54%), Positives = 414/573 (72%), Gaps = 26/573 (4%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AKTY F LDPFQ  ++  +E N+SVLV+AHTSAGKT VAEYAIA + RD QRV+YTSP+K
Sbjct: 2   AKTYPFTLDPFQSTAIGYVESNQSVLVAAHTSAGKTVVAEYAIAKSLRDGQRVVYTSPIK 61

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYR+L +EF+DVGLMTGD+T++P A+CLVMTTEILR MLYRGSEV++EVAWVI+D
Sbjct: 62  ALSNQKYRDLQEEFEDVGLMTGDITINPGATCLVMTTEILRSMLYRGSEVMREVAWVIYD 121

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HYM+D+ERGVVWEESII LP  ++ VFLSAT+ NA QF  WI  +H QPCHVVYT++R
Sbjct: 122 EVHYMRDKERGVVWEESIILLPHKVRFVFLSATIPNARQFVSWIAKIHHQPCHVVYTNYR 181

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           PTPLQHYVFP G  GL+LVVDEK +FRE NF +                 K  G   KG 
Sbjct: 182 PTPLQHYVFPQGADGLHLVVDEKGKFREANFQR-----------AMGGKRKQRGGGPKGQ 230

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
           S    +D+ +IVK+IM R   PVIVFSFS+++CE++A+ + + D+    EK+ + QV+ N
Sbjct: 231 S----NDLHRIVKLIMTRNLNPVIVFSFSKKDCEKYALELKREDYTDDTEKELISQVYSN 286

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           A++ L+++D+ LP +E +LPLLKRG+ VHH GLLP++KE+VE+LF EGL+KALFATETFA
Sbjct: 287 AIESLSDDDKKLPQVEALLPLLKRGLGVHHGGLLPILKEIVEILFSEGLIKALFATETFA 346

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
           +G+NMPAKTVVFT  +KWDG   R++ SGEYIQMSGRAGRRGKDDRG+ I M+DE+ME  
Sbjct: 347 IGINMPAKTVVFTNTRKWDGKEIRWVTSGEYIQMSGRAGRRGKDDRGVVIQMMDEKMEPA 406

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
             K ++ G P PL S++R+SY  +LN++ R E     E++++ SFHQ+Q E   P +  +
Sbjct: 407 VCKGILYGDPDPLNSSYRISYNMLLNML-RVE-DVDPEYLLRASFHQYQQESEAPALEAQ 464

Query: 550 VSKLEEEAASLDA--SGEAE----VAEYHKLKLDIAQLEKKLMSEITRPERVLYYL-GSG 602
             + + EA S++    G  E    V EY  +   +   ++K++    RPE +L ++  SG
Sbjct: 465 ADQHDAEAKSIEVVPGGTEEDVALVGEYFGMDRQLLLTQRKMIKVQRRPEHILPFVQSSG 524

Query: 603 RLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPS 635
           RLI V   G ++GWGV+V   KK  AG GT  S
Sbjct: 525 RLIDVTIDGENYGWGVIVRYRKK--AGTGTAGS 555



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 198/321 (61%), Gaps = 14/321 (4%)

Query: 644 VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
           V L  I  +S +RL VP D +P +AR++I+ +++E++ RFP GLP L+PVKD+KI   E 
Sbjct: 631 VGLDSIDRISAVRLFVPQDAKPPEARRNIMKSLKEVKRRFPDGLPLLDPVKDLKINVGEF 690

Query: 704 VDLVNQIEELEHKLFAHPLNKSQDE----NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
             L+ +  EL+ +L +H L    DE     ++  ++R+ +   + + L+ + R  Q    
Sbjct: 691 DKLLQRASELKERLASHRLATEVDEAERVRRVSAYERRQDETDKARLLRREARACQTMVM 750

Query: 760 RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
           +DEL+   RVLK+LGH+DA GV+Q KGR AC I+T +EL+V EL+F G FNDL   Q  A
Sbjct: 751 KDELRRMKRVLKELGHVDAAGVIQTKGRTACEINTANELVVVELVFAGLFNDLSVEQAVA 810

Query: 820 LASCFIPVDKSSEQIN----LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV 875
           L SC I  +++ +  +    L+  L+ P  +L ESA+K+A++   C +EVN DE+VE   
Sbjct: 811 LLSCLIFDERTKDDDDPAQGLKSYLSNPYYKLIESAKKVAKVMASCNIEVNEDEFVEK-F 869

Query: 876 RPFLMDVIYCWS-KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            P L+ ++     +G + A+      I +GS IR+ RRL+E + QL +A++A+G + L+ 
Sbjct: 870 NPGLLRLVQGGKVRGGSEAD----GHIRKGSTIRALRRLEELVRQLASASKAIGNLELQA 925

Query: 935 KFAAASESLRRGIMFSNSLYL 955
           KF   SE L+R I+F +SLYL
Sbjct: 926 KFEKGSELLKRDIVFCSSLYL 946


>gi|77554317|gb|ABA97113.1| Superkiller viralicidic activity 2-like 2, putative, expressed
           [Oryza sativa Japonica Group]
          Length = 776

 Score =  643 bits (1658), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/767 (45%), Positives = 492/767 (64%), Gaps = 47/767 (6%)

Query: 232 WICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVK-LQDTFLKQ 290
           +I  +HKQPCH+VYTD+RPTPLQHYVFP GG GLYLVVDEK +FRED+F K L       
Sbjct: 14  FISQVHKQPCHIVYTDYRPTPLQHYVFPSGGDGLYLVVDEKSKFREDSFQKGLNALVPAS 73

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
           +   +RENGK    +   G  S  SDIFK+VKMI++R++ PVI+FSFS+RECE  AM M+
Sbjct: 74  ENDKKRENGKWQKGLL-TGKPSEDSDIFKMVKMIIQRQYDPVILFSFSKRECEFLAMQMA 132

Query: 351 KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
           K+D N  +EK  +E +F +A+D L+++D+ LP +  MLPLLKRGI VHHSGLLP++KE++
Sbjct: 133 KMDLNDDDEKANIETIFWSAMDLLSDDDKKLPQVSNMLPLLKRGIGVHHSGLLPILKEVI 192

Query: 411 ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
           E+LFQEGL+K LFATETF++GLNMPAKTVVFT V+K+DGD  R++ SGEYIQMSGRAGRR
Sbjct: 193 EILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDRFRWLSSGEYIQMSGRAGRR 252

Query: 471 GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
           G D RGICI+MVDE+ME +T K ++ G    L S F LSY  +LN +   +G    E ++
Sbjct: 253 GIDQRGICILMVDEKMEPSTAKMILKGSADSLNSAFHLSYNMLLNQIRCEDGD--PEKLL 310

Query: 531 KNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEIT 590
           ++SF+QFQ ++ LPD+ K+V +LE E  S+    E  +  Y+ L      L+K +   + 
Sbjct: 311 RHSFYQFQADRVLPDLEKQVKELELERNSMIIEEEENLKSYYDLLQQYKNLKKDVRDIVH 370

Query: 591 RPERVLYYLGSGRLIKVR----EGGT-----DWGWGVVVNV------------------- 622
            P+ VL +L  GRL +V+    E  T     +  WGV +N                    
Sbjct: 371 SPKYVLPFLQPGRLARVQYSTDEQSTFSIDENITWGVTINFEKVKTHSEDRRPEDSDYTV 430

Query: 623 -------VKKPSAGVGTL---PSRGGGYIVPVQLPL--ISTLSKIRLSVPPDLRPLDARQ 670
                  V K  +G  T+   P +  G  V + LPL  I  LS IR+ +P DL P++AR+
Sbjct: 431 DVLTRCSVSKDKSGKKTMKIIPLKDRGEPVVISLPLSQIDGLSSIRMHIPKDLLPVEARE 490

Query: 671 SILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDE 728
           + L  V E+ SRF + G+P L+P +DMK++         +IE LE     H + N    +
Sbjct: 491 NTLRKVDEVISRFAKDGIPLLDPEEDMKVQSSSFRKASRRIEALESLFEKHDVHNSPHIK 550

Query: 729 NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
            +++    K E++ +I+ +K  MR S    F+DELK R RVL++LG+I ++ VV++KG+ 
Sbjct: 551 QKLKVLHAKQELSTKIKAIKRTMRSSTALAFKDELKARKRVLRRLGYITSEDVVEVKGKV 610

Query: 789 ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 848
           AC I + DEL +TELMF+GT  D    Q+ AL SCF+  +K  +    R EL     QLQ
Sbjct: 611 ACEISSADELTLTELMFSGTLKDATVEQMVALLSCFVWQEKLQDAPKPREELDLLFFQLQ 670

Query: 849 ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
           E+AR++A +Q +CK++++V+ +V S  RP +M+ +Y W+KG+ F ++++MT +FEGS+IR
Sbjct: 671 ETARRVANLQLDCKIQIDVESFVNS-FRPDIMEAVYSWAKGSKFYQIMEMTQVFEGSLIR 729

Query: 909 SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           + RRL+E L QL  A++++GE  LE K   A   ++R I+F+ SLYL
Sbjct: 730 AIRRLEEVLQQLILASKSIGETQLEAKLEEAVSKIKRDIVFAASLYL 776


>gi|387593908|gb|EIJ88932.1| ATP-dependent DEAD/H RNA helicase [Nematocida parisii ERTm3]
 gi|387595891|gb|EIJ93514.1| ATP-dependent DEAD/H RNA helicase [Nematocida parisii ERTm1]
          Length = 976

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 382/990 (38%), Positives = 589/990 (59%), Gaps = 80/990 (8%)

Query: 13  PEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKT 72
           P++++ +    E +S  +  +   +  H   +P  +A       + T A+   N  +  T
Sbjct: 20  PKQEIFLDTAIEVDSFVESNDGYNTVRHTAIIPEDFA-------YSTLADS--NIPVQCT 70

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F+LD FQ +++ CLER+ES+LVSAHTSAGKT VAEYAI ++ + KQRVIYTSP+KALS
Sbjct: 71  YPFKLDKFQELALQCLERDESLLVSAHTSAGKTLVAEYAIHLSIQRKQRVIYTSPIKALS 130

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQKYREL+++F DVGLMTGDVTL+P+++C+VMTTEILR M+YRG+E+L+E  +V+FDE+H
Sbjct: 131 NQKYRELNEKFGDVGLMTGDVTLNPDSTCIVMTTEILRNMIYRGTEILRETHFVVFDEVH 190

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           YM+DRERGVVWEE+II LP  I+ +FLSAT+ NA +FA WI  +HKQPCHV+YT+ RPTP
Sbjct: 191 YMRDRERGVVWEETIILLPSTIRFIFLSATIPNAEEFARWIVSIHKQPCHVIYTEKRPTP 250

Query: 253 LQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGS 312
           L+HYV+ V   G   V+    Q +    +  Q   +  K G  +   K   R+ +  +GS
Sbjct: 251 LEHYVY-VNAPGKASVIKPGGQLKS---ISDQLFVMVDKDGAFQ--SKNIARIQQRPAGS 304

Query: 313 GGS-------DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LDFNTQEEKDTVE 364
            G        ++  I++++      P I+FSF R+ECE +AM   K  DFNT+E+K+ ++
Sbjct: 305 TGYTRRREMINVVDILRILKSTNNLPTIIFSFRRKECEVYAMVAEKEFDFNTEEDKEMID 364

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            +F NA+  L EEDR LP I  +  LL RGI VHHSGL+P++KE++E+LFQE L+K LFA
Sbjct: 365 TIFTNALTTLREEDRKLPQILGLKALLLRGIGVHHSGLMPIVKEIIEILFQENLLKVLFA 424

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TETF++GLNMPAK+V+FT++KK+DG   R+I SGEYIQMSGRAGRRG D  G  I+ ++ 
Sbjct: 425 TETFSIGLNMPAKSVIFTSIKKFDGVQTRFITSGEYIQMSGRAGRRGTDKIGNVILALES 484

Query: 485 QMEMN--TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE-- 540
            + ++   +K ++ G    L S F+LSY +ILN++ R +G    +HVIK+SF QF+YE  
Sbjct: 485 TLTLSEKEIKKVLHGPSNTLDSAFKLSYNTILNIL-RLDG-MDEDHVIKHSFLQFRYEMR 542

Query: 541 ---------KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
                    K + ++G+     ++E   +  +      E+ K   DI Q E     + T 
Sbjct: 543 GKALYLLMHKYIDELGRVTRIFDQETVGMKNT------EHIKKYCDIKQQEINCRKDCTP 596

Query: 592 PERVL-YYLGSGRLIKV---REGGTDWGWGVVV---NVVKKPSAGVGTLPSRGGGYIVPV 644
           P+  L   L  G++++V   R    + G  + V   +VV   S  +  +  R    +V  
Sbjct: 597 PQATLNRVLVPGKIVEVEVRRPKVREIGREITVEYPDVVMGGSKILAIIMERADDNLV-- 654

Query: 645 QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF------------PQGLPKLNP 692
              L++    I  +    +R + A+ S+ +  ++ +SRF             Q L  L  
Sbjct: 655 ---LMTEEESIIEAEVSCIRNI-AKTSLEIKAKKSKSRFFREFFNESKKKNKQLLETLAF 710

Query: 693 VKDMKIEDPE----VVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEI-QQL 747
              +++  PE    + D + +  E  +  +  PLN   D++++          HE+ +++
Sbjct: 711 YTPVELGIPEEMAAIADKLEKAAEYIYDGYIRPLN-PLDKDRVFKLMDMLFYTHELRRKI 769

Query: 748 KSKMRDSQIQKFR--DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           +S  ++ +  +    +E  N+ ++L+ L ++    V+ +KG+ A  I +GDELL+TE++F
Sbjct: 770 ESLAKEKEQTRLVMIEEYNNKRKILQALFYLSQKEVL-IKGKVASEISSGDELLLTEMLF 828

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
           N  F+ L   ++ +L SC +  D  S++I L  E    L+ L ++  ++        +  
Sbjct: 829 NNEFSKLSPGRICSLLSCVV-FDDKSDKITLTPESESALKILTQTVDRLVTEFERLDMNF 887

Query: 866 NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
              EY E      LMDV+Y W++G +FAE+ + T++FEGSIIR  RRL+E L ++  A++
Sbjct: 888 KAKEYTEKFCCN-LMDVVYRWTEGYSFAEICETTEVFEGSIIRCFRRLEEVLKEMSRASK 946

Query: 926 AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +G V +E KF+AA   ++R I+F+NSLYL
Sbjct: 947 VIGNVEMENKFSAAISLVKRDIVFANSLYL 976


>gi|300707105|ref|XP_002995775.1| hypothetical protein NCER_101250 [Nosema ceranae BRL01]
 gi|239604987|gb|EEQ82104.1| hypothetical protein NCER_101250 [Nosema ceranae BRL01]
          Length = 928

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 391/968 (40%), Positives = 556/968 (57%), Gaps = 117/968 (12%)

Query: 31  QRNLTRSCVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
           +RN T+   HE AVP G  Y L  +E    T          AKTY+FELD FQ++S+  L
Sbjct: 35  ERNGTK---HEAAVPIGVDYTLIPNEFQEFT----------AKTYNFELDIFQKISLCAL 81

Query: 89  ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
           ER+ESVLVSAHTS+GKT VAEYAIAM+ RD QRV+YTSP+KALSNQKYREL +EF DVGL
Sbjct: 82  ERDESVLVSAHTSSGKTVVAEYAIAMSLRDNQRVVYTSPIKALSNQKYRELLEEFTDVGL 141

Query: 149 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
           MTGDVT++P ASCLVMTTEILR MLYRGSEV++E+ W+IFDEIHYM+DRERGVVWEE+II
Sbjct: 142 MTGDVTINPGASCLVMTTEILRNMLYRGSEVIREIHWIIFDEIHYMRDRERGVVWEETII 201

Query: 209 FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
            LP  ++M+FLSAT+ NA +FAEWI ++ KQ  HVVYT+ R TPL HY        LY +
Sbjct: 202 LLPSHVRMIFLSATIPNALEFAEWISYIQKQVVHVVYTEKRITPLVHY---FKTDKLYTI 258

Query: 269 VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
            D   +F ++ F K   T  K +I  R                        I+ +I +  
Sbjct: 259 KD--SEFHKNEFYKAMKTVKKGRINER-----------------------NIISVIRDVS 293

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             P ++FSF R++CE  A+ +   D+   EEK+ V  VF+NA+D L +EDR LP I  +L
Sbjct: 294 L-PAVIFSFRRKDCEYFAIRLID-DYLNDEEKEAVNTVFRNAIDSLRKEDRELPIINNIL 351

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
           PLL RGI +HHSGLLP+IKE+VE+LFQEGL+K LFATETF++GLNMPAK+V+FT++KK+D
Sbjct: 352 PLLLRGIGIHHSGLLPIIKEIVEILFQEGLLKVLFATETFSIGLNMPAKSVIFTSLKKFD 411

Query: 449 GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
           G   R++ S EYIQMSGRAGRRG D++GI + ++ + M    LKD+       L+S FRL
Sbjct: 412 GVKTRHLTSAEYIQMSGRAGRRGIDEKGIVVSLLSDVMTYAELKDLFSCSKDNLISAFRL 471

Query: 509 SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
           +Y  ILNLM R EG     ++I  SFH FQ   A     +K S+L E  + +    + ++
Sbjct: 472 TYNMILNLM-RVEG-LDPLYLISRSFHHFQ---AFKKGKEKESELFEMYSLIKDLPKTKL 526

Query: 569 AEYHKLKLDIAQLEK------KLMSEITRPERVLYYLGSGRLIKV---REGGTDWGWGVV 619
            +       + +LE       K +S   RP     ++  GR++ +   R G + +    +
Sbjct: 527 VDL------LTELENEKVVRCKKLSVQFRP-----FVKKGRVVDLFIPRFGASIFIKNAI 575

Query: 620 VNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLA---- 675
           ++ ++     V  + ++     + V +  +  +   R    P +   D  +   +     
Sbjct: 576 IDEIEDEHI-VCLVFTKECIKKITVDINTVYMVYDFRAKFNPKVFYKDFEKITYIEDNDL 634

Query: 676 VQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI-EELEHKLFAHPLNKSQDENQIRC- 733
           V ELE +  +  P +N          +   + N+I  E  +   ++ L+  + +  + C 
Sbjct: 635 VNELEEKLKKSFPNIN---------LQYCIICNKIFPECYYSCSSYFLSGEEYKIDVDCS 685

Query: 734 --FQRKAE----------------VNHEIQQLKSKMRDSQIQKFR-----DELKNRSRVL 770
             F  K +                + +EI +   K +  ++ K +     DE K    VL
Sbjct: 686 YIFDNKIKKPAKEPFYVDLDTVNYIKNEIYKDAYKNKFKEMSKLKEIYHMDECKKMINVL 745

Query: 771 KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
           + L + D D  V +KGR AC I +GDEL++TE++FNG F  L+      L SC +  + +
Sbjct: 746 RDLEYAD-DTTVAIKGRLACEISSGDELVLTEMIFNGDFQKLEVDDFVPLLSCMVFEEWN 804

Query: 831 SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWS 887
            E   L  E  K    +++S RK+  + ++  LE    +Y    +R F   +MDV+  W 
Sbjct: 805 EEDFVLSDENKKLYSLIEDSVRKVCRVLHKHGLEGTPKKY----LRKFSYEMMDVVKMWC 860

Query: 888 KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
           +G TF E+   T++FEGSIIR+ +RL+E L QL  AA+ +G   LE  F+     ++R I
Sbjct: 861 RGHTFLEICNSTEVFEGSIIRTFKRLEELLKQLSNAARVIGNNELENMFSDGIVKIKRDI 920

Query: 948 MFSNSLYL 955
           +F+NSLYL
Sbjct: 921 VFANSLYL 928


>gi|378756169|gb|EHY66194.1| ATP-dependent DEAD/H RNA helicase [Nematocida sp. 1 ERTm2]
          Length = 970

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 368/937 (39%), Positives = 564/937 (60%), Gaps = 89/937 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F+LD FQ +++ CLER+ES+LVSAHTSAGKT VAEY+I ++ + KQRVIYTSP+KALS
Sbjct: 69  YPFKLDKFQEIALQCLERDESLLVSAHTSAGKTLVAEYSIHLSIQRKQRVIYTSPIKALS 128

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQKYREL+++F DVGLMTGDVTL+P+++C+VMTTEILR M+YRG+E+L+E  +V+FDE+H
Sbjct: 129 NQKYRELNEKFGDVGLMTGDVTLNPDSTCIVMTTEILRNMIYRGTEILRETHFVVFDEVH 188

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           YM+DRERGV+WEE+II LPP+I+ +FLSAT+ NA +FA WI  +HKQPCHV+YT+ RPTP
Sbjct: 189 YMRDRERGVIWEETIILLPPSIRFIFLSATIPNAEEFARWIVSIHKQPCHVIYTEKRPTP 248

Query: 253 LQHYVFPVGGSG-----------------LYLVVDEKEQFREDNFVKLQDT-FLKQKIGG 294
           L+HY++ V   G                 L+++VD++  F+  N  ++Q    + Q    
Sbjct: 249 LEHYIY-VNTPGNKITHRNTDQLKTVSDQLFVIVDKEGTFQTKNIPRIQRRPEISQGYNR 307

Query: 295 RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LD 353
           RRE                  ++  I++++ +    P I+FSF R+ECE +AM   K  D
Sbjct: 308 RRET----------------INVVDILRILRQTNNLPTIIFSFRRKECESYAMLTEKEFD 351

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
           FNT +EKD +  +F NA++ L EEDR LP I  +  LL RGI VHHSGL+P++KE++E+L
Sbjct: 352 FNTDKEKDMISTIFSNALNTLREEDRTLPQIVGLKALLLRGIGVHHSGLMPIVKEIIEIL 411

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           FQE L+K LFATETF++GLNMPAK+V+FT++KK+DG   R+I SGEYIQMSGRAGRRG D
Sbjct: 412 FQENLLKVLFATETFSIGLNMPAKSVIFTSIKKFDGVQTRFITSGEYIQMSGRAGRRGTD 471

Query: 474 DRGICIIMVDEQMEMNT--LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
             G  I+ ++  M +    ++ ++ G    L S F+LSY +ILN++ R +G    +HVIK
Sbjct: 472 RIGNVILALESTMTLTEKEIRKVLHGPSNTLDSAFKLSYNTILNIL-RLDG-MQEDHVIK 529

Query: 532 NSFHQFQYEKALPDIGKKVSKLEE--EAASLDASGE-------AEVAEYHKLKLDIAQLE 582
           +SF QF++E     +  +++K  +   AA  + + E       A++ +Y ++K    Q  
Sbjct: 530 HSFLQFRHEMQGKALYMRMTKYIDGLSAAHAEYTAETANIQEIAQIKKYCEIKQQEGQAR 589

Query: 583 KKLMSEITRPERVLYYLGSGRLIKV---REGGTDWGWGVVV---NVVKKPSAGVGTLPSR 636
           K+ +   +   R+L     GR+++V   R    +    + V   + V  P   +  L   
Sbjct: 590 KECIPSQSALRRLLV---PGRILEVEIPRTKTRNMQPDITVEYVDAVTGPRRTLAILVEY 646

Query: 637 GGGYIV---------PVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL 687
               ++          + +  I  +SK  + +        +++S     +E  S     +
Sbjct: 647 SESALIIMTEEESVLEIDVSCIRQISKSSVEIK-------SKKSKTKVFREFFSSKSADI 699

Query: 688 PKLNPVKDMKIE-DPEVVDLVNQIEELEHKLFA---HPLNKSQDENQI-----RCFQRKA 738
             L+     ++    E+ ++  ++E    +++    +PLN SQD+  +       F   A
Sbjct: 700 NALSFYASNELGISSELAEMAVRLETAADRIYTAYIYPLN-SQDKTAVFKAIDDLFYMHA 758

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
            V  EI  L  K   +++    DE  N+ R+L+ L ++    V+ +KG+ A  I +GDEL
Sbjct: 759 -VQQEIDALGKKKEQTRLVMI-DEYNNKRRILQGLSYLSQKEVL-IKGKVASEISSGDEL 815

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
           L+TE++FN  F+ L   ++ +L SC +  DKS ++I+L  E    L+ L ++  ++    
Sbjct: 816 LLTEMLFNNEFSKLSPGRICSLLSCVVFDDKS-DKISLTPESESALKILTQTVDRLVSEF 874

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
               +     EY E      LMDV+Y W++G +F+E+ + T++FEGSIIR  RRL+E L 
Sbjct: 875 ERLDMNFKAKEYTEKFCCN-LMDVVYRWTEGYSFSEICETTEVFEGSIIRCFRRLEEVLK 933

Query: 919 QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           ++  A++ +G V +E KF+AA   ++R I+F+NSLYL
Sbjct: 934 EMSRASKVIGNVEMENKFSAAISLVKRDIVFANSLYL 970


>gi|412993030|emb|CCO16563.1| ATP-dependent RNA helicase DOB1 [Bathycoccus prasinos]
          Length = 1124

 Score =  634 bits (1635), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 308/580 (53%), Positives = 411/580 (70%), Gaps = 26/580 (4%)

Query: 38  CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           C+H++  P  Y  +K +               AK Y FELD FQ  SV CLER ESVLVS
Sbjct: 81  CLHDMVCPENYQPSKKKMPKVP----------AKKYPFELDTFQEQSVLCLERQESVLVS 130

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT VAEYAIAMA RD QRV+YTSPLKALSNQKYREL +EF DVGLMTGD  ++P
Sbjct: 131 AHTSAGKTVVAEYAIAMAKRDGQRVVYTSPLKALSNQKYRELKEEFSDVGLMTGDTVINP 190

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
           NASCLVMTTE+LR MLY+G EV +EV WVI+DEIHYM+D+ERGVVWEESI+ LP  +K V
Sbjct: 191 NASCLVMTTEVLRSMLYKGGEVTREVGWVIYDEIHYMRDKERGVVWEESIVLLPDTVKYV 250

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA +F+EW+C +H  PCH+VYTDFRPTPL+HY++P GG G++L+VD+   F+E
Sbjct: 251 FLSATIPNAREFSEWVCKVHDIPCHIVYTDFRPTPLEHYIYPSGGDGIFLIVDKTSAFKE 310

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMA---KGGSGSGG-----SDIFKIVKMIMERKF 329
           DNF+K     +  + G      + + R A    GG G+       +D+FKI+KMI++R +
Sbjct: 311 DNFLKA--ISIANEKGAEVAQARTAARKASEMNGGDGTQAKLAQNTDVFKIIKMIVDRNY 368

Query: 330 QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
            PVIVF+F++ ECE  A ++ K+D   + EK+ ++ ++ NA+D L+E D+ LP +  M  
Sbjct: 369 DPVIVFAFNKGECESFANALHKVDLCDENEKEMIDAIYWNAMDALSESDKKLPQVASMPN 428

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           LL+RG+ VHHSGLLP++KE++E+LFQEGL+K LFATET ++GLNMPA+T VF + +K+DG
Sbjct: 429 LLRRGLGVHHSGLLPILKEVIEILFQEGLIKVLFATETMSVGLNMPARTCVFASPRKFDG 488

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
              R+I SGEY QMSGRAGRRGKDDRG+ ++MVDE+M+  T KDM+ G+  PL S F +S
Sbjct: 489 TGFRWITSGEYTQMSGRAGRRGKDDRGLVVLMVDEKMDAPTAKDMLRGRSDPLDSAFHVS 548

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
           Y ++LNLM R EG    E +I NSF QFQ  + +P +  KV+ LE++   +    E +V 
Sbjct: 549 YATLLNLM-RVEGA-EPEDMIMNSFAQFQNMRRVPQLEAKVALLEKKRDEIKIEHEEQVN 606

Query: 570 EYHKLK--LDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
           EY KL+  LD    E++ ++ +  P   + +L  GRL++V
Sbjct: 607 EYVKLRDGLDALTSERRAITNL--PTHSVPFLQPGRLVRV 644



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 192/347 (55%), Gaps = 33/347 (9%)

Query: 641  IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG-------------- 686
            +V V L  +  +S IR+ +P DL P++AR     +++E+  RF +               
Sbjct: 779  VVRVPLEQLDCMSSIRVYLPKDLYPIEARTRCGASIREVLKRFEERSKEERERKEQKEEE 838

Query: 687  ------LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE-NQIRCFQRKAE 739
                  +P L+  KDMK+ D      V +I+ L   +  H    S++   ++R    K  
Sbjct: 839  EEDEIVIPMLDAEKDMKVTDKAYAKTVQKIQMLSKMMQDHGFKTSENAIERLRKHVEKRR 898

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            + + ++  K ++  +      D LK   RVL++LG++  DGVV  KGR AC +   DEL+
Sbjct: 899  LEYLVKHAKKEVTVASGMIKADVLKRMRRVLRRLGYVSEDGVVTQKGRCACELAGADELV 958

Query: 800  VTELMFNGTFNDLDHHQVAALASCFI-----------PVDKSSEQINLRMELAKPLQQLQ 848
             TEL+FNGTF  L  H + A  SC +            V+   + +N+  ++      ++
Sbjct: 959  ATELIFNGTFKALPLHMLVATVSCLVWKEKTGGKGGKDVNGKKQGMNVSEDVFSAHSNVK 1018

Query: 849  ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
            ++ARK+ + Q ECKL+V+V++ +E  +R  LM+V+  W KG TF+E+++MT+ FEGSI+R
Sbjct: 1019 DAARKVFKQQLECKLKVDVEDSIER-LRWDLMEVMLAWCKGNTFSEIMKMTEAFEGSIVR 1077

Query: 909  SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + RR++E + QL +A + +GE +LEKKF  A E ++R I+F+ SL++
Sbjct: 1078 AIRRIEELMRQLASACKVIGESDLEKKFLDACELVKRDIVFTPSLFV 1124


>gi|449681401|ref|XP_002171281.2| PREDICTED: superkiller viralicidic activity 2-like 2-like, partial
           [Hydra magnipapillata]
          Length = 539

 Score =  634 bits (1634), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 289/451 (64%), Positives = 366/451 (81%), Gaps = 13/451 (2%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           SC HEVA+P G+     E +      P    E AK Y F LDPFQ+ ++ CL+ N+SVLV
Sbjct: 93  SCTHEVALPGGFIY---EGL------PFKPDEPAKKYPFVLDPFQQEAIRCLDNNQSVLV 143

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIAM+ + +QRVIYT+P+KALSNQKYRE+++EF+DVGLMTGDVT++
Sbjct: 144 SAHTSAGKTVIAEYAIAMSLQKRQRVIYTTPIKALSNQKYREMYEEFQDVGLMTGDVTIN 203

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           PNAS ++MTTEILR MLYRGSE+++EVAWV+FDEIHYM+D+ERGVVWEE+II LP  ++ 
Sbjct: 204 PNASVIIMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKERGVVWEETIILLPDNVRH 263

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           VFLSAT+ NA QFAEWI +LHKQPCHVVYTDFRPTPLQHY++P GG GL+LVVDEK  FR
Sbjct: 264 VFLSATIHNARQFAEWIAYLHKQPCHVVYTDFRPTPLQHYIYPSGGDGLHLVVDEKGDFR 323

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
           E+NF K   +   Q        G A G+  KG     GS+++KIVKMIMER + PVI+FS
Sbjct: 324 EENFNKAMSSLQDQST----VEGNAQGKTKKGKGNQTGSNVYKIVKMIMERNYAPVIIFS 379

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FS++ECE +A+ MSKLDFNT EEK  V +VF+NA+DCL+++D+ LP +E +LPLLKRGI 
Sbjct: 380 FSKKECEGYALQMSKLDFNTAEEKKLVGEVFKNAIDCLSDDDKKLPQVEHVLPLLKRGIG 439

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
           +HH GLLP++KE++E+LF EGL+KALFATETFA+GLNMPA+TV+FT+ +K+DG  +R+I 
Sbjct: 440 IHHGGLLPILKEVIEILFSEGLIKALFATETFALGLNMPARTVLFTSARKFDGKDYRWIT 499

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
           SGEYIQMSGRAGRRG D+RGI I++VDE++E
Sbjct: 500 SGEYIQMSGRAGRRGIDERGIVIMIVDEKLE 530


>gi|320593806|gb|EFX06209.1| ATP-dependent RNA helicase dob1 [Grosmannia clavigera kw1407]
          Length = 1133

 Score =  632 bits (1630), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 320/595 (53%), Positives = 419/595 (70%), Gaps = 20/595 (3%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            E A+ Y F LDPFQ +S+A +ER ESVLVSAHTSAGKT VAEYAIA  F+  QRVIYTS
Sbjct: 158 AEPARVYPFPLDPFQSLSIASIEREESVLVSAHTSAGKTVVAEYAIAQCFKRNQRVIYTS 217

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQK+R+   EF DVGLMTGDVT++P ASCLVMTTEILR MLYRGSE+++EVAWV
Sbjct: 218 PIKALSNQKFRDFQAEFGDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEIMREVAWV 277

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           +FDEIHY++D+ RGVVWEE+II LP  +  VFLSAT+ NA QFAEWI  +H+Q CHVVYT
Sbjct: 278 VFDEIHYLRDKSRGVVWEETIILLPDKVHYVFLSATIPNAFQFAEWIAKIHRQACHVVYT 337

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ-----------KIGGR 295
           DFRPTPLQ+Y FP GG+G+ LVVDE+  F+E NF  +    ++Q           K+ G 
Sbjct: 338 DFRPTPLQNYCFPAGGNGILLVVDERGVFKEKNF-NMAMALVEQNKGADPADINAKMKGH 396

Query: 296 RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
            +N K + +    G     SDI+KI++MIM++ F PVIVF+FS+RECE  A+ +S ++FN
Sbjct: 397 GKN-KKTNKGGGSGGNESSSDIYKIIRMIMKKNFHPVIVFNFSKRECEMLALKISGMNFN 455

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
            + E+  V +VF+NA+D L+E DR L  I  +LPLL++GI VHHSGLLP++KE+VE+LFQ
Sbjct: 456 NESEQALVTRVFENAIDTLSEADRELSQITHLLPLLRKGIGVHHSGLLPILKEIVEILFQ 515

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           E L+K LFATETF++GLNMPA+TVVFT V+K+DG S R + S EY+QMSGRAGRRG DDR
Sbjct: 516 ENLIKVLFATETFSIGLNMPARTVVFTTVRKFDGVSMRPLTSSEYVQMSGRAGRRGLDDR 575

Query: 476 GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           GI I+M+D+++E  T K +V GK   L S F L Y  ILNL  R E   + E++++  F 
Sbjct: 576 GIVIMMLDDKLEPETAKAIVAGKQDRLNSAFHLGYNMILNL-QRIE-TVSPEYMLERCFF 633

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERV 595
           QFQ   ++P + K++  L++E  S     E  V EY+KL+  I +  K ++  +  P   
Sbjct: 634 QFQNASSVPQLEKELLALQQERDSTIIPDENTVKEYYKLRQLIEEYRKDMVLVMQHPTYC 693

Query: 596 LYYLGSGRL--IKVREGGTDWGWGVVVNVVKK--PSAGVGTLPSRGGGYIVPVQL 646
           L +L  GRL  IK   GG D+GWG V++  ++  P  G   +P++   Y V V L
Sbjct: 694 LPFLQPGRLVHIKTPNGGQDFGWGAVLSFTQRRAPRRGEEEVPAQ-ESYSVDVAL 747



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 202/318 (63%), Gaps = 5/318 (1%)

Query: 641  IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
            IVP  L  ++ +SK+R+ +P ++     R+     ++E+E RFP G+P L+P+++MKI D
Sbjct: 818  IVPCLLSCVTAMSKLRIFMPDNVSKKAGREQTGKVIREVERRFPDGIPTLDPIENMKITD 877

Query: 701  PEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
                 L+ +IE LE KL A+PL+ S    ++ + +  K  +   +++ K  +  +     
Sbjct: 878  ESFKKLIRKIELLESKLLANPLHGSPILPELWQKYDSKVALGERVKEKKKAIAKAHSIAQ 937

Query: 760  RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT--GDELLVTELMFNGTFNDLDHHQV 817
             DELK+R  VL++LG I+ + VVQLK R AC I +  G ELL++EL+FN  FNDL    V
Sbjct: 938  LDELKSRKTVLRRLGFINEEDVVQLKARVACQISSTEGHELLLSELLFNRFFNDLAPEVV 997

Query: 818  AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            A++ +CF+  D+  E  +L+  LAKPL++++  A+ IA++  E KL+VN DEYV+S ++ 
Sbjct: 998  ASVMTCFL-FDEKVEAPDLKENLAKPLREIKAQAKIIAKVSQESKLDVNEDEYVQS-LKW 1055

Query: 878  FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
             LM+ +  W+ GA+FAE+ +MT+ +EGS++R  RRL+E L Q+  A + +G   L KKF 
Sbjct: 1056 QLMETVLSWANGASFAEICKMTNAYEGSLVRLFRRLEELLRQMAEAGKVMGSEELTKKFE 1115

Query: 938  AASESLRRGIMFSNSLYL 955
             + E ++RGI+ + SLYL
Sbjct: 1116 QSLEKIKRGIVAAQSLYL 1133


>gi|302850166|ref|XP_002956611.1| hypothetical protein VOLCADRAFT_107315 [Volvox carteri f.
            nagariensis]
 gi|300258138|gb|EFJ42378.1| hypothetical protein VOLCADRAFT_107315 [Volvox carteri f.
            nagariensis]
          Length = 1484

 Score =  630 bits (1624), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 322/576 (55%), Positives = 402/576 (69%), Gaps = 27/576 (4%)

Query: 36   RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
            +SC HEVA P G           T   P   G  A+ Y F++DPFQ+V+V CLE   SV+
Sbjct: 451  KSCTHEVAWPPGQE-------GSTLPPPAREGAPARVYPFKIDPFQQVAVNCLEAGHSVM 503

Query: 96   VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
            V+AHTSAGKT VAEYA AMA RDK RV+YTSPLKALSNQKYREL +EF DVGLMTGDVT+
Sbjct: 504  VAAHTSAGKTVVAEYAFAMALRDKTRVVYTSPLKALSNQKYRELAEEFVDVGLMTGDVTI 563

Query: 156  SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
            +PNASCLVMTTEILR MLYRGSEV++EV  V++DEIHY++D+ERGVVWEESII  P   +
Sbjct: 564  NPNASCLVMTTEILRSMLYRGSEVVREVQLVVYDEIHYLRDKERGVVWEESIILAPRQAR 623

Query: 216  MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             VFLSAT+ NA +FA+W+   H+ PCHVVYTD+RPTPLQHY+FP GG GLY+VVDE+  F
Sbjct: 624  FVFLSATIPNAREFADWVAKTHRSPCHVVYTDYRPTPLQHYLFPAGGDGLYMVVDERGVF 683

Query: 276  REDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
            REDNF K    L +T          +NG   G    GG+ S  SDIFK+V+MIMER + P
Sbjct: 684  REDNFQKAVGVLTETDAGGGKAKGGKNGGGGGSAPVGGADSQKSDIFKLVRMIMERNYDP 743

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            VIVFSFS+RECE  A  M+ L+ N+++EK         A+D     D+ LP I  MLP+L
Sbjct: 744  VIVFSFSKRECEALAAQMAPLELNSEDEK---------ALD-----DQRLPQITAMLPML 789

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RG+ VHHSGLLP++KE+VE+LFQEGL+K LFATETF+ GLNMPAKTVVFT VKK+DG  
Sbjct: 790  QRGVGVHHSGLLPIVKEVVEILFQEGLLKCLFATETFSTGLNMPAKTVVFTNVKKYDGGV 849

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
             R+I SGEYIQMSGRAGRRG DDRG+ I+M+D ++E    K+M+ G P  L S F L Y 
Sbjct: 850  FRWITSGEYIQMSGRAGRRGLDDRGVVILMLDTRLEPPVAKEMIKGAPDTLYSAFHLGYN 909

Query: 512  SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEY 571
             +L LM R EG    E ++  SF QFQ E++LP +  +VS LE +  ++    E  V +Y
Sbjct: 910  MLLGLM-RVEGA-EPEQLMGASFRQFQVERSLPSLEARVSTLEAQRDAIVVPDEQSVRQY 967

Query: 572  HKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
            + L   +A L   L   +  P+  L +L  GRL+++
Sbjct: 968  YALLDQLASLRASLRGFLNSPQVCLPFLQPGRLVRL 1003



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 193/339 (56%), Gaps = 25/339 (7%)

Query: 641  IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG------LPKLNPVK 694
            +V   L  +  LS +R+ +  DLRPLDAR++   A+ E   R          +P L+P  
Sbjct: 1147 VVTFSLAQVDRLSSVRIYLQRDLRPLDARKAACAALAEALVRLAGQRKSGGRVPLLDPED 1206

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIR----CFQRKAEVNHEIQQLKSK 750
            DMK+ D  V    ++IE +E  L AHPL  S    ++R      QR++     +   + +
Sbjct: 1207 DMKVTDKAVRKTQSKIESVEGLLAAHPLATSLPAPELRSRLGALQRRSAAEEAVAAARRE 1266

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
             + +     +DELK R RVL++L ++D DGVV +KGR A  +  GDEL++ EL+F G FN
Sbjct: 1267 AKAATSLILKDELKARQRVLRRLTYVDEDGVVTVKGRLAAGLSCGDELVLCELVFAGAFN 1326

Query: 811  DLDHHQVAALASCFIPVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECKLEVN-- 866
             +    +AA  SCF+  +K  E     LR EL   L  ++++AR++A+++ +CK+ ++  
Sbjct: 1327 AMSLEALAAACSCFVFQEKGGEGGGPKLRDELVGALAAVKDAARRVAKVELDCKMALDCG 1386

Query: 867  ----------VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
                      +D+YV +  RP LM+ +  W +G  FAE+++MT +FEGS++R+ RRL+E 
Sbjct: 1387 PHGGSASTTSLDDYV-AKFRPDLMEPVAAWVRGVKFAELVKMTTVFEGSLVRAIRRLEEL 1445

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            L QL  A + +GE+ L ++F    E ++R I+F+ SLYL
Sbjct: 1446 LRQLAEALKGIGELALSERFEQTRERIKRDIIFAASLYL 1484


>gi|396081235|gb|AFN82853.1| Ski2 ATP-dependent RNA helicase [Encephalitozoon romaleae SJ-2008]
          Length = 933

 Score =  629 bits (1621), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 406/979 (41%), Positives = 555/979 (56%), Gaps = 96/979 (9%)

Query: 13  PEEDLHVTGTPEEEST---KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM 69
           P +D+ +    E+ +    K  RN TR   HE  +P G A T    +   FA P      
Sbjct: 15  PSQDIVIPERLEKRTMVTDKVDRNGTR---HEAVIPVGTAYT---PLPKEFAAP-----S 63

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AK Y FELD FQ++SV  LER+ESVLVSAHTS+GKT VAEYAIAM+ + KQRV+YTSP+K
Sbjct: 64  AKNYLFELDDFQKISVCSLERDESVLVSAHTSSGKTVVAEYAIAMSLKSKQRVVYTSPIK 123

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYREL  EF DVGLMTGDVT++P A+CLVMTTEILR MLY+G EV++E+ W+IFD
Sbjct: 124 ALSNQKYRELLSEFGDVGLMTGDVTINPTATCLVMTTEILRNMLYKGGEVVREIHWIIFD 183

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHYM+D+ERGVVWEE+II LP  ++MVFLSAT+ NA +FAEWICH+  Q  HVVYT+ R
Sbjct: 184 EIHYMRDKERGVVWEETIILLPRHVRMVFLSATIPNALEFAEWICHIQNQVVHVVYTEKR 243

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
            TPL HY      + LY + D+K  F + +F+    +  K+ +G R  +   S       
Sbjct: 244 VTPLVHY---FRTNKLYKIKDKK--FHKSSFLSAMRSIQKRAVGPREVSEAISDASL--- 295

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                                PV+VFSF R++CE+ AM + K      E K  V+ +F N
Sbjct: 296 ---------------------PVVVFSFRRKDCEKFAMKLDKSYLGDSEAK-MVQTIFTN 333

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           A+  L +EDR +P I+ +LPLL RGI +HHSGLLP+IKE+VE+LFQEGL+K LFATETF+
Sbjct: 334 AIMSLRKEDREIPIIQNILPLLMRGIGIHHSGLLPIIKEVVEILFQEGLLKVLFATETFS 393

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
           +GLNMPAK+VVFTA+KK+DG+S R + SGEYIQMSGRAGRRG D  GI I ++ E +   
Sbjct: 394 IGLNMPAKSVVFTALKKFDGESMRLVSSGEYIQMSGRAGRRGIDSMGIVISIISEPITYK 453

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ-YEKALPDIGK 548
            +  +       LVS FRL+Y  +LNLM R EG     ++I  SFH FQ Y+KAL +   
Sbjct: 454 EVCKLFSSSSDNLVSAFRLTYNMLLNLM-RVEG-LDPLYLISRSFHHFQSYKKALAE--- 508

Query: 549 KVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV- 607
                EE   S+    E  +     + L   + EKK+       E    YL  GR++ + 
Sbjct: 509 -----EETLYSMHRQLE-NICPNGIVTLYRIREEKKVERNKRLSEEFSKYLKKGRVVDLF 562

Query: 608 --REGGTDWGWGVVVNVVK-KPSAGVGTLPSRGGGYIVPVQLPLISTL--SKIRLSVPPD 662
             R G +      +V+ V+ K    VGT     G Y+    L  +  +  S+++L +   
Sbjct: 563 IPRNGPSITIRNAIVSKVQEKVLCMVGT---DEGVYMCGFPLYYVDCVYDSRVKLDMRVF 619

Query: 663 LRPLD---ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK--- 716
            R  +       +   + E+ES+     PK +    M    P +  LV+  +EL  K   
Sbjct: 620 TRSFEKITVEDELDKEIGEIESKILSIDPKWSFDFCMICGKPSMGCLVSCSKELISKDAV 679

Query: 717 LFAHPLN-KSQDENQIRCFQRKAEVNHEIQQLKSK-MRDSQIQKFRDEL----------- 763
           +   P N ++  EN  +      ++  EI + +S  M +   Q+  D+L           
Sbjct: 680 MVQVPENGRNYRENPKQSRWLDTKMKGEIGEARSYFMNEILKQQCMDKLLELKGLKEIYH 739

Query: 764 ----KNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
               K    VLKKL + + D  V +KGR AC I +GDEL++TE++FNG F  +       
Sbjct: 740 MRECKKMIEVLKKLEYCN-DTSVLIKGRMACEISSGDELVLTEMIFNGDFAGIPVEHFVP 798

Query: 820 LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF- 878
           L SC +  +  S+   L  E     + L  S  K+  +   C ++V+   Y    +R F 
Sbjct: 799 LLSCIVFEEWDSDNFVLSDENKLYYKLLSSSVEKVCGVLKSCSIDVDPAAY----LRRFS 854

Query: 879 --LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
             LMDV+  W  G TF  +   T+IFEGSIIR+ +RL+E L QL +AA+ +G   LE  F
Sbjct: 855 YELMDVVRMWVCGHTFVSICSRTNIFEGSIIRTFKRLEELLRQLSSAARVIGNTELENMF 914

Query: 937 AAASESLRRGIMFSNSLYL 955
           A     ++R I+F+NSLY+
Sbjct: 915 ALGIAKIKRDIVFANSLYI 933


>gi|401826040|ref|XP_003887114.1| superfamily II RNA helicase [Encephalitozoon hellem ATCC 50504]
 gi|392998272|gb|AFM98133.1| superfamily II RNA helicase [Encephalitozoon hellem ATCC 50504]
          Length = 933

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 396/959 (41%), Positives = 553/959 (57%), Gaps = 91/959 (9%)

Query: 29  KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
           + +RN TR   HE  VP   A T    +   FA P      AK+Y FELD FQ++SV  L
Sbjct: 34  RMERNGTR---HEAVVPVDAAYT---PLPKEFAAP-----SAKSYLFELDDFQKISVCSL 82

Query: 89  ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
           ER+ESVLVSAHTS+GKT VAEYAIAM+ ++KQRV+YTSP+KALSNQKYREL  EF DVGL
Sbjct: 83  ERDESVLVSAHTSSGKTVVAEYAIAMSLKNKQRVVYTSPIKALSNQKYRELLSEFGDVGL 142

Query: 149 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
           MTGDVT++P A+CLVMTTEILR MLYRG EV++E+ W+IFDEIHYM+D+ERGVVWEE+II
Sbjct: 143 MTGDVTINPAATCLVMTTEILRNMLYRGGEVVREIHWIIFDEIHYMRDKERGVVWEETII 202

Query: 209 FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
            LP  ++MVFLSAT+ NA +FAEWICH+  Q  HVVYT+ R TPL HY      + LY +
Sbjct: 203 LLPRHVRMVFLSATIPNALEFAEWICHIQSQVVHVVYTEKRVTPLVHY---FRSNRLYKI 259

Query: 269 VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
            D K  F + NF+    + +++++ G RE  +A                       +E  
Sbjct: 260 KDTK--FHKSNFLSAMRS-IQKRVVGPREVSEA-----------------------IEDA 293

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             PV+VFSF R++CE+ AM + K      E K  VE +F NA+  L +EDR +P I+ +L
Sbjct: 294 SLPVVVFSFRRKDCEKFAMKLDKSYLRDSEAK-MVETIFTNAIMSLRKEDREIPIIQNIL 352

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
           PLL RGI +HHSGLLP+IKE+VE+LFQEGL+K LFATETF++GLNMPAK+VVFTA+KK+D
Sbjct: 353 PLLMRGIGIHHSGLLPIIKEVVEILFQEGLLKVLFATETFSIGLNMPAKSVVFTALKKFD 412

Query: 449 GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRL 508
           G+S R +  GEYIQMSGRAGRRG D  G+ I +V E +    +  +       LVS FRL
Sbjct: 413 GESMRLVSPGEYIQMSGRAGRRGIDSMGVVISIVSEPITYKEVGKLFSSSSDNLVSAFRL 472

Query: 509 SYYSILNLMSRAEGQFTAEHVIKNSFHQFQ-YEKALPDIGKKVSKLEEEAASLDASGEAE 567
           +Y  +LNLM R EG     ++I  SFH FQ Y+KAL +  + +  +  +  S+  +  A 
Sbjct: 473 TYNMLLNLM-RVEG-LDPLYLISRSFHHFQSYKKALAE-EETLHLMHRQLESICPNRIAS 529

Query: 568 VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV---REGGTDWGWGVVVNVVK 624
           +  Y + +    +  K+L  E ++      YL  GR+I +   R G +      +V+ V+
Sbjct: 530 L--YGRREQKRVERNKRLSEEFSK------YLKKGRVIDLFVPRNGPSITIRNAIVSKVQ 581

Query: 625 -KPSAGVGTLPSRGGGYIVPVQLPLISTL--SKIRLSV---PPDLRPLDARQSILLAVQE 678
            K    VGT     G Y+    L  I  +  ++++L +     +   +    S+   ++E
Sbjct: 582 EKVLCMVGT---DEGVYMCGFPLHYIDCVYANRVKLDIRVFTRNFEKITIEDSLDKEIRE 638

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEEL---EHKLFAHPLNKSQDENQIR--- 732
           +E       PK +    M      +  L +  +EL   +  +   P N  +     +   
Sbjct: 639 IEDEILSIDPKWSFDFCMICGKTSMGCLASCSKELIGEDSVMIQVPENGKKHRESPKSQG 698

Query: 733 CFQRKAEVNHEIQQLKSKMRDSQI-QKFRDEL---------------KNRSRVLKKLGHI 776
           C      +N E+ + +S   +  + QK+ D+L               K    VLK+L + 
Sbjct: 699 CLD--TNMNGEMGEARSYFMNEMLKQKYMDKLFELNSLKEIYHMKECKKMIEVLKRLEYC 756

Query: 777 DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
           + D  V +KGR AC I +GDEL++TE++FNG F  +       L SC +  +  S+   L
Sbjct: 757 N-DTDVLIKGRMACEISSGDELVLTEMIFNGDFAGIPVEHFVPLLSCIVFEEWDSDNFVL 815

Query: 837 RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
             E     + L  S  K+  +   C L+V+   Y++      LMDV+  W  G TF  + 
Sbjct: 816 SDENKLYYKLLSSSVEKVCNVLKSCSLDVDPAAYLKRFSYE-LMDVVRMWVCGHTFVNIC 874

Query: 897 QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             T+IFEGSIIR+ +RL+E L QL +AA+ +G   LE  FA     ++R I+F+NSLY+
Sbjct: 875 SKTNIFEGSIIRTFKRLEELLRQLSSAARVIGNTELENMFALGISKIKRDIVFANSLYI 933


>gi|116199875|ref|XP_001225749.1| hypothetical protein CHGG_08093 [Chaetomium globosum CBS 148.51]
 gi|88179372|gb|EAQ86840.1| hypothetical protein CHGG_08093 [Chaetomium globosum CBS 148.51]
          Length = 726

 Score =  626 bits (1615), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 315/621 (50%), Positives = 427/621 (68%), Gaps = 23/621 (3%)

Query: 34  LTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNES 93
           L+ +  H+VA+P        E I  +   P    E A+TY F LDPFQ +SVA +ER+ES
Sbjct: 105 LSHNIQHQVALPPDLDY---EYIPLSEHKP--PAEPARTYPFRLDPFQAMSVASIERDES 159

Query: 94  VLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDV 153
           VLVSAHTSAGKT VAEYAIA   +  QRVIYTSP+KALSNQKYR+   +F DVGLMTGDV
Sbjct: 160 VLVSAHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYRDFQADFGDVGLMTGDV 219

Query: 154 TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
           T++P ASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHYM+D+ RGVVWEE+II LP  
Sbjct: 220 TINPTASCLVMTTEILRSMLYRGSEIMREVAWVIFDEIHYMRDKTRGVVWEETIILLPDK 279

Query: 214 IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKE 273
           ++ VFLSAT+ NA QFAEWI  +H+Q CHVVYTDFRPTPLQ+Y FP G +G++L+VDEK 
Sbjct: 280 VRYVFLSATIPNAFQFAEWIAKIHRQACHVVYTDFRPTPLQNYFFPAGTNGIHLIVDEKG 339

Query: 274 QFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG--------SGSGGSDIFKIVKMIM 325
            F+E+NF  L    ++ K G    +  A  +             +    SDI K++KMI+
Sbjct: 340 NFKENNF-NLAMAAIESKKGSDPADWSAKQKGKGKNKKTNKGGEAPDEKSDIAKVIKMII 398

Query: 326 ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
           ++ FQPVIVF+F++RECE  A+  S + FN  +E+  V+ VFQNA+  L++ED+NLP I 
Sbjct: 399 KKSFQPVIVFNFAKRECEMMALKTSVMKFNAADEEAMVDSVFQNALGQLSDEDKNLPQIS 458

Query: 386 LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
            +LPLL++GI VHHSGLLP++KE +E+LFQEGL+K LFATETF++GLNMPA+TVVFT V 
Sbjct: 459 NILPLLRKGIGVHHSGLLPILKETIEILFQEGLIKVLFATETFSIGLNMPARTVVFTQVT 518

Query: 446 KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
           KWDG   R + S EYIQM+GRAGRRG DDRGI I+M+D+++E +  + +V+G    L S 
Sbjct: 519 KWDGVQRRPLTSSEYIQMAGRAGRRGLDDRGIVIMMIDDKLEPDVARGVVVGHQDRLNSA 578

Query: 506 FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
           F L Y  ILNL+ R E   + E +++  F QFQ   ++P + + ++ L++E  S+    E
Sbjct: 579 FHLGYNMILNLL-RIEA-ISPEFMLERCFFQFQNTSSVPQLERDLASLQQERDSMIIPDE 636

Query: 566 AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGWGVVVNVVK 624
           A + +Y  ++  +   +K +++ +  P   + +L  GR +++    GT +GWGVV   + 
Sbjct: 637 ATIKDYRTIRQQLDGYQKDMLAVMQHPNYCVKFLKPGRPVEIETPSGTKYGWGVVKEPMS 696

Query: 625 KPS-----AGVGTLPS-RGGG 639
           +P+     A +   P+ R GG
Sbjct: 697 RPTPPCPMASIRQSPAIRAGG 717


>gi|429961689|gb|ELA41234.1| hypothetical protein VICG_01723 [Vittaforma corneae ATCC 50505]
          Length = 900

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 380/925 (41%), Positives = 542/925 (58%), Gaps = 74/925 (8%)

Query: 40  HEVAVPSGYALTKDEAIHGTFANPVYNGEM-AKTYSFELDPFQRVSVACLERNESVLVSA 98
           HE  VP G          G+++   +     AK Y FELD FQ++S+  +ER+ESVLVSA
Sbjct: 41  HEAVVPFG----------GSYSEIPHEPRCDAKKYKFELDTFQKISICSIERDESVLVSA 90

Query: 99  HTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPN 158
           HTS GKT VAEYAIA + ++ QRV+YTSP+KALSNQKYREL +EF DVGLMTGDVT++P 
Sbjct: 91  HTSCGKTVVAEYAIAQSIKNNQRVVYTSPIKALSNQKYRELQEEFGDVGLMTGDVTINPE 150

Query: 159 ASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVF 218
           ASCLVMTTEILR MLYRGSEV++EV W+IFDE+HYM+DRERGVVWEE+II LP  ++MVF
Sbjct: 151 ASCLVMTTEILRNMLYRGSEVIREVHWIIFDEVHYMRDRERGVVWEETIILLPGHVRMVF 210

Query: 219 LSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRED 278
           LSAT+ NA +FAEWI ++ +Q  HVVYT+ R  PL HY        LYL+ D+K  F   
Sbjct: 211 LSATIPNALEFAEWISYIQQQIVHVVYTEKRVIPLIHY---FQTDDLYLIKDKK--FHLK 265

Query: 279 NFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFS 338
            F++      K+K                        D+ KI++  +ER   P +VFSFS
Sbjct: 266 QFMRSMQNVPKRK------------------------DMDKILQEAIERANTPAVVFSFS 301

Query: 339 RRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVH 398
           R+ECE +A+ + K D   +EEKD V+ +F NA+  L +EDRN+P IE MLPLL+RGI +H
Sbjct: 302 RKECEGYAVKIRK-DLLDEEEKDLVKTIFDNAIASLRQEDRNIPIIEKMLPLLQRGIGIH 360

Query: 399 HSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSG 458
           HSGLLP+I+E+VE+LFQE L+K LFATETF++GLNMPAKTV+FT+++K+DG + R + SG
Sbjct: 361 HSGLLPIIREIVEILFQESLLKVLFATETFSIGLNMPAKTVIFTSLRKFDGTNRRLLTSG 420

Query: 459 EYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS 518
           E+IQMSGRAGRRG D+ G  I ++ E++ +  +K +       L S FRL+Y  ILNL+ 
Sbjct: 421 EFIQMSGRAGRRGLDEMGAAICILTEELTVAQVKTIFSSSADKLFSAFRLTYNMILNLL- 479

Query: 519 RAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDI 578
           R EG     +V+  SF  FQ  K         S LE+E   +D    AE  E  +L L  
Sbjct: 480 RVEG-LDPTYVLSRSFFHFQAYK---------SALEQENKIVDVPF-AEETELSQLLLRR 528

Query: 579 AQLEKKLMSEITRPERVLYYLGSGRLIKV---REGGTDWGWGVVVNVVKKPSAGVGTLPS 635
            +L  +    +    + +     GR++ +    +G        +V  V K S     + +
Sbjct: 529 EELYCRRNEALASAFKDMIR-AKGRVVDLMIPHKGSILPIRNAIVKEVTKHSTVQAYILT 587

Query: 636 RGGGYIVPVQLPLISTLSKIRLSV-----PPDLRPLDARQSILLAVQELESRFPQGLPKL 690
                +    L  +S++  ++  V         RP++ +  +   +  LE++  +  P +
Sbjct: 588 NKDIELKEYPLAYVSSVYDVQCKVDIKVFSKRFRPIEYKDDVNEEITRLENKIREIEPSI 647

Query: 691 NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSK 750
           +    +  ++P    LV+     E+     PL     E+ +R    +  +  +I+ L +K
Sbjct: 648 DLSSCLFCKNPSRACLVS----CEYTPTNTPLLDKSIEH-LRYLVEQENLQEKIEYL-NK 701

Query: 751 MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
           +++       +E K    VL++L +ID D  V +KG+ A  I  GDEL++TE++FN  F 
Sbjct: 702 LKEIY---HMEECKKMIGVLRRLEYID-DTSVLIKGKMASEISAGDELVITEMIFNSEFI 757

Query: 811 DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
           +L    + AL SC +  ++S+E + L  E       L  +A +I +I NEC ++V   EY
Sbjct: 758 NLSLTDMVALLSCCV-CEESTENLVLSEENDAVYTLLVNAAERIVKIMNECGIDVREAEY 816

Query: 871 VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
           +       LMD++  W  G TF E+ + T+IFEGSIIR  +RL+E L QL  AA  +G  
Sbjct: 817 I-GRFSHALMDIVKMWMTGRTFVEICESTNIFEGSIIRVFKRLEELLRQLSNAAAVIGNN 875

Query: 931 NLEKKFAAASESLRRGIMFSNSLYL 955
            L   F+     ++R I+F+NSLYL
Sbjct: 876 ELVNLFSQGIFLIKRDIVFANSLYL 900


>gi|340503355|gb|EGR29952.1| superkiller viralicidic activity 2, putative [Ichthyophthirius
           multifiliis]
          Length = 755

 Score =  625 bits (1611), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 323/797 (40%), Positives = 510/797 (63%), Gaps = 47/797 (5%)

Query: 164 MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATM 223
           MTTEILR MLYRGSE+ +EVAWVIFDE+HYM+D+ERGVVWEE+II L   ++ VFLSAT+
Sbjct: 1   MTTEILRSMLYRGSEITREVAWVIFDEVHYMRDKERGVVWEETIILLNQNVRYVFLSATI 60

Query: 224 SNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL 283
            NA +FAEWI  + KQPCHVVYTD+RP PLQH++FP GG GLYL+VD+K  FREDNF K 
Sbjct: 61  PNAGEFAEWITRIKKQPCHVVYTDYRPVPLQHFIFPTGGEGLYLIVDQKGNFREDNFQKA 120

Query: 284 QDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE 343
             + +   I     + K      K    + G+D+ KI+K+I+ +   P IVFSFS+R+ E
Sbjct: 121 L-SVMGDNIDLVNLDKK------KRKKPTEGADLNKILKVIVNKGLDPAIVFSFSKRDVE 173

Query: 344 QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLL 403
            +A SM  +D  +QEEK+ ++  F  A+  L EED+ LP I  +LP+L+RGI +HH GLL
Sbjct: 174 SYAKSMGSMDLTSQEEKEKIDMFFNGAISQLAEEDQKLPQIIQILPILRRGIGMHHGGLL 233

Query: 404 PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQM 463
           P++KE++E+LFQ+G +K LF+TETF+MG+NMPA+TVVFT+V+K+DG+  R+I  GEYIQM
Sbjct: 234 PIVKEIIEILFQQGRIKILFSTETFSMGVNMPARTVVFTSVRKFDGEDFRWIQGGEYIQM 293

Query: 464 SGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQ 523
           SGRAGRRGKDD+G  I+MVD++ME +  K M+ G+  PL S F L Y  ++N M   +  
Sbjct: 294 SGRAGRRGKDDKGFTILMVDQKMEPDVAKQMLKGQSDPLNSAFHLCYNMLINSMRLEDTD 353

Query: 524 FTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEK 583
              E++I+ S  QFQ +K LP++  K+ +L ++   ++   E +++E  +          
Sbjct: 354 --PEYIIRRSLLQFQNDKQLPEMEIKLIQLNKQYNEINIEYEGQISEIQE---------- 401

Query: 584 KLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVP 643
                  +PE ++       +I +++           N   KP+     +   G   ++P
Sbjct: 402 ------NQPEEIIVV---DIMIHIKKRAN--------NEEPKPAK----INEDGELEVIP 440

Query: 644 VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
           + L  I+ LS I+L +P  L   + +  I   ++E+   F + +P ++P+KDMKI + ++
Sbjct: 441 MNLSCITELSSIKLDLPSKLDTQENKMMIKETLKEIHQSFTENIPTIHPIKDMKINNEQL 500

Query: 704 VDLVNQIEELEHKLFAHPLNK--SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
             ++++ E+L+               + QI+ +++K ++  +I++LK ++  +      +
Sbjct: 501 DKIIDKKEKLKESKSKSEKKLLIKNVQQQIQNYEKKIKIKTQIEKLKIEIEKNNKIVLEE 560

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            L   +RV+++L  +D + +VQLKG+ AC I   DE+L TEL+F   FND+  +Q+AA+ 
Sbjct: 561 NLVFMTRVMRRLSFLDKEQIVQLKGKVACEISACDEILATELLFANFFNDMTPNQIAAVL 620

Query: 822 SCFIPVDKSSEQINLRME---LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           SC +  D++S Q N +++   L+K    + + A++I  +  E K+E+   +Y+ ST++P 
Sbjct: 621 SCLVH-DENSNQDNQQIQDKDLSKYFDIIIDHAKRIYIVMQESKMEIEEKDYL-STIKPQ 678

Query: 879 LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
           L+DV+Y W++G +F+++ ++++ +EGSIIRS RRLDE L Q+  A + +G   L++KF  
Sbjct: 679 LIDVVYKWAQGDSFSDISKLSNCYEGSIIRSVRRLDELLKQMEKACEIIGNEILQQKFKE 738

Query: 939 ASESLRRGIMFSNSLYL 955
           AS++++RGI+F+ SLY+
Sbjct: 739 ASKNIKRGIIFAASLYI 755


>gi|307102833|gb|EFN51100.1| hypothetical protein CHLNCDRAFT_141429 [Chlorella variabilis]
          Length = 1049

 Score =  624 bits (1610), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 310/577 (53%), Positives = 401/577 (69%), Gaps = 14/577 (2%)

Query: 36  RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           +SC HEVA P G     +E        P   G  A+ Y F LDPFQ+ +V  LE   SVL
Sbjct: 36  KSCTHEVAWPPG-----EEG--SLLPPPPRAGPPAREYPFPLDPFQQTAVNALEAGHSVL 88

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           V+AHTSAGKT VAEYA  MA RD  +V+YTSPLKALSNQKYREL ++F DVGLMTGDVT+
Sbjct: 89  VAAHTSAGKTVVAEYAFGMALRDGHKVVYTSPLKALSNQKYRELQEQFGDVGLMTGDVTI 148

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +PNASCLVMTTEILR M+YRG+E+++++A +++DEIHY++D+ERGVVWEESII  P   +
Sbjct: 149 NPNASCLVMTTEILRSMMYRGTELVRQLALIVYDEIHYLRDKERGVVWEESIILAPKTAR 208

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
             FLSAT+ N+ +FA+W+   H  PCHVVYTD+RPTPL+HY+FP GG GL+LVVD K  F
Sbjct: 209 FAFLSATIPNSREFADWVAKTHGSPCHVVYTDYRPTPLEHYIFPAGGDGLFLVVDNKGTF 268

Query: 276 REDNFVKLQDTFLKQKIGGRR-----ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ 330
           REDNF K      + ++  +R           G + + G+    SDIFKIV+MI ER+F 
Sbjct: 269 REDNFQKAVAQLQEAEVKAKRPAGGGGGKGKKGGVQEAGAPKEESDIFKIVRMIAERRFD 328

Query: 331 PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           PVIVFSFS++ECE  A  M  LD N + EK  V+ +F +A+D L++ DR LP I   LP+
Sbjct: 329 PVIVFSFSKKECEALAKQMQGLDLNEEAEKKLVDGIFSSAIDVLSDADRRLPQIAGALPM 388

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L+RG+ VHHSGLLP++KE+VE+LFQEGL+K LFATETF+ GLNMPAKTVVFT V+K+DG 
Sbjct: 389 LRRGVGVHHSGLLPILKEVVEILFQEGLLKVLFATETFSTGLNMPAKTVVFTHVRKFDGG 448

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
             R++ SGEYIQMSGRAGRRG DD+G+ I+M+DE++E    KDM+ G P  L S F L Y
Sbjct: 449 GFRWVRSGEYIQMSGRAGRRGLDDKGVAILMMDEKLEPAVAKDMIKGAPDTLHSEFHLEY 508

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE 570
             +LNL+ R EG    E ++  S+ QFQ E+ALP +  +V +LE E   L    E  V E
Sbjct: 509 SMLLNLL-RVEG-VEPEELMARSYRQFQMERALPQLEARVRRLEAERDGLVIEQEESVKE 566

Query: 571 YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
           Y  L   +A+L  +  + +  P+  L +L  GRL++V
Sbjct: 567 YLALSQQLAKLRAETRAIVAAPQHCLPFLQPGRLVRV 603



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/344 (37%), Positives = 205/344 (59%), Gaps = 24/344 (6%)

Query: 635  SRGGGYIVPVQLPLISTLSKIRLSVPPDLR--------------------PL--DARQSI 672
            ++G   ++PV LP ++  S +R+ +P DLR                    P+  +AR+  
Sbjct: 707  AKGSPAVIPVALPELAAFSSLRIYIPQDLRTQASPHRRQQPANLPAVLSLPMLPEARERC 766

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIR 732
              ++ E+E RFP+GLP+L+P +DM+IED  +  L+ + E +E  L  HPL  S    Q  
Sbjct: 767  AKSLAEVERRFPKGLPQLDPAEDMRIEDEGLRKLLRKAESVEGLLAKHPLAASPSLQQQL 826

Query: 733  CFQRKAEVNHE-IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
                + +  HE ++  K + + +      ++LK R RVL +L ++D  GVV LKGR A  
Sbjct: 827  DTLLQKQALHEAVRTAKKECKAAAALICHEDLKARKRVLSRLDYLDRSGVVTLKGRFAAE 886

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            + TGDEL++TE++F G F D+   Q+ AL SCFI  +KS     +R +L  P   L+ +A
Sbjct: 887  LSTGDELVLTEMVFAGVFQDMSLEQLCALISCFIWREKSETGNKVRPDLEAPYGSLRAAA 946

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            RK+A    +CK+E++V+EYV+S  RP +M+ +  W +G +FAE+++ T++FEGS++R+ R
Sbjct: 947  RKVARAAADCKMEMDVEEYVDS-FRPDMMESVAGWCQGLSFAELLKRTEVFEGSLVRAIR 1005

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RL+E L Q+    +AVGE  L ++F AA   ++R I+F+ SLYL
Sbjct: 1006 RLEELLRQVAGVLKAVGEAGLGERFEAAIARIKRDIVFAASLYL 1049


>gi|358335386|dbj|GAA31470.2| ATP-dependent RNA helicase DOB1 [Clonorchis sinensis]
          Length = 993

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 291/564 (51%), Positives = 406/564 (71%), Gaps = 15/564 (2%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MAKTY F LDPFQ+ ++ C++  +SVLVSAHTSAGKT VAE     +   +QRVIYT+P+
Sbjct: 1   MAKTYPFTLDPFQQQAILCIDNGQSVLVSAHTSAGKTVVAE-----SLNRRQRVIYTTPI 55

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+RE   EFKDVGLMTGD+T++P A+ L+MTTEILR MLYRGS+V +EV WVIF
Sbjct: 56  KALSNQKFREFTAEFKDVGLMTGDITINPEATVLIMTTEILRSMLYRGSDVTREVGWVIF 115

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DEIHY++D+ERGVVWEE+II LP ++ +VFLSAT+ NA QFAEWI +LH +PCHVVYTD+
Sbjct: 116 DEIHYLRDKERGVVWEETIILLPHSVGLVFLSATIPNARQFAEWIVYLHHRPCHVVYTDY 175

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PLQHYVFP GG G++LVV++K +F E NF     T L++  G    + +  GR  KG
Sbjct: 176 RPVPLQHYVFPCGGDGIHLVVNQKREFLESNF-HAALTVLQKAAGEAASDTQMRGR--KG 232

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           GS        K+V ++ME+  +P+IVFSFS+ +CE  A  M+K+DFNT  EK  V+ +F 
Sbjct: 233 GSTRAQPYCAKLVNLVMEQNLEPLIVFSFSKMDCEFFATQMNKMDFNTDTEKAAVDLIFN 292

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
           NA+D L+ ED+ LP ++++LP+L+RG+ +HH GLLP++KE+VE+LF EGL+K L+ATETF
Sbjct: 293 NAIDGLSAEDKRLPQVQILLPVLRRGVGIHHGGLLPILKEIVEILFAEGLIKVLYATETF 352

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
           AMGLNMPA+TV+FT  +K+DG   R + SGEYIQMSGRAGRRGKDDRG  I+M+D+++  
Sbjct: 353 AMGLNMPARTVLFTGTRKFDGREFRLVTSGEYIQMSGRAGRRGKDDRGTVILMLDDRISS 412

Query: 489 NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             ++ ++LG+P  L S F L+   +L+L+ R E     E +++ SF+QFQ    LP + K
Sbjct: 413 AEVRKLLLGEPDRLDSAFYLTNNMVLSLL-RVE-DINPELMLEKSFYQFQNRSKLPSMEK 470

Query: 549 KVSKLEEEAASLDASGEAEVAE---YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
            V +LE +  +L    + ++ +   Y KLK  +A   +   +  T+ + V+ +L  GR++
Sbjct: 471 CVKELESKLQALSFPTDVDMEQLESYVKLKEALASANRDRWALATKSKTVIPFLQPGRVV 530

Query: 606 KVREG-GTDWGWGVVVNVVKKPSA 628
           +V      D+GWG+V++ + +PS+
Sbjct: 531 RVHTSDDIDFGWGIVLH-INRPSS 553



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 174/325 (53%), Gaps = 34/325 (10%)

Query: 664 RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
           +P   R+ +   +Q  + +    LP L+P+KDM  +D  + +    +  LE ++  +PL 
Sbjct: 670 QPESVRRHLWQGIQRAKEKLGGSLPLLDPIKDMNNKDKRLKECTEMVHMLESRVSLNPLA 729

Query: 724 KSQDENQ-IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
              D +Q +  F R+A +  ++++ ++ + +        EL+ R R+L++LG       +
Sbjct: 730 SRPDIDQLVDIFTRRALIVCDLKRARNALDNRHTLFHLGELQARKRLLRRLGFCSETDAI 789

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS---EQINLRME 839
             KGR AC I +GDEL++TELM +G F+ L   Q+A + SCF+  +KSS   ++  LR +
Sbjct: 790 AFKGRVACEISSGDELMLTELMLDGLFSPLTPAQLAGVLSCFV-AEKSSGKHQRTQLRPD 848

Query: 840 LAKPLQQLQESARKIAEIQNECKLEV-------------NVDEYV-------------ES 873
           +A+ L+ +Q  AR +A +  EC++               N+ E               ++
Sbjct: 849 MAQALETVQTKARFLARVATECRISSSHLSSDPTDGASGNIPEVAALLNSRASSLDDEQA 908

Query: 874 TVRPF---LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
            V  F   LM+V+  W++G +FA + ++T +FEGS+IR  RRLDE L Q+  AA+  G  
Sbjct: 909 YVDRFSGDLMEVVRAWAEGVSFARLCELTSVFEGSVIRCMRRLDELLRQMHDAAKVAGNT 968

Query: 931 NLEKKFAAASESLRRGIMFSNSLYL 955
            LE KF+ A   ++R I+F+ SLYL
Sbjct: 969 ELENKFSEAMVLIKRDIVFAASLYL 993


>gi|440293885|gb|ELP86932.1| DEAD/DEAH box helicase, putative, partial [Entamoeba invadens IP1]
          Length = 533

 Score =  600 bits (1547), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 289/510 (56%), Positives = 369/510 (72%), Gaps = 15/510 (2%)

Query: 8   GKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNG 67
            KRK   E+ +    P +          + C H++AVP G   T+         NP Y  
Sbjct: 32  AKRKKQIEEKYKDFMPNDTPAPVLEAQYQGCSHDIAVPDGTTPTE------VMYNPKYPE 85

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
             AKTY F LD FQR+SV+C+ +NESVLVSAHTSAGKTAVAEYAIA A ++ QRVIYTSP
Sbjct: 86  NPAKTYPFTLDDFQRLSVSCIAQNESVLVSAHTSAGKTAVAEYAIAQALKNNQRVIYTSP 145

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+L ++FKDVGL+TGD++ +  ASCLV+TTEILR MLYRG++V++EVAWVI
Sbjct: 146 IKALSNQKFRDLQEQFKDVGLITGDISTNETASCLVVTTEILRNMLYRGNDVMREVAWVI 205

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDEIHYM+D+ERGVVWEESII LP  +  VFLSAT+ NA +FA+WI  +H Q CHVVYTD
Sbjct: 206 FDEIHYMRDKERGVVWEESIILLPNNVHYVFLSATIPNALEFAKWIAKIHDQVCHVVYTD 265

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           +RPTPL HY+FP+ G+G++LVVD++ +FRE+ F K         +G +           K
Sbjct: 266 YRPTPLCHYLFPINGNGIHLVVDKECKFREEGFSKALTALGLDAVGIQTN---------K 316

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
           GG  S  +DI KI+ MI +    PV+VFSFSR++ E    S+ +L+F + +EK    ++F
Sbjct: 317 GGKSSAKNDILKIITMINKNNLAPVVVFSFSRKDVEALGKSIMRLNFTSDDEKALTTKIF 376

Query: 368 QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            NA+ CL E DR LP I  + PLL RGI +HHSGLLP++KE+VELLFQEGL+K LFATET
Sbjct: 377 TNAIQCLKEHDRKLPQITEIFPLLLRGIGIHHSGLLPIVKEVVELLFQEGLLKCLFATET 436

Query: 428 FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
           FAMGLNMPA+TVVFT VKK+DG   R++  GEYIQMSGRAGRRGKDD+G  I+MV++++E
Sbjct: 437 FAMGLNMPARTVVFTDVKKFDGKQSRFLRPGEYIQMSGRAGRRGKDDQGTVILMVNQKIE 496

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            N LK+MV GK  PL+S+F L Y  +LNLM
Sbjct: 497 PNILKNMVFGKAEPLMSSFYLGYNMLLNLM 526


>gi|294897845|ref|XP_002776083.1| ATP-dependent RNA helicase DOB1, putative [Perkinsus marinus ATCC
           50983]
 gi|239882662|gb|EER07899.1| ATP-dependent RNA helicase DOB1, putative [Perkinsus marinus ATCC
           50983]
          Length = 617

 Score =  593 bits (1529), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 292/524 (55%), Positives = 375/524 (71%), Gaps = 29/524 (5%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+HE  +P+ +A  K          P Y GE AKTY + LD FQ  +V+CLER+ESVLV
Sbjct: 88  NCLHECILPANWAKEK--------RLPKYEGEPAKTYPYTLDRFQSEAVSCLERSESVLV 139

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF-KDVGLMTGDVTL 155
           SAHTSAGKT VAEYAIAM+ RD QRVIYTSP+KALSNQKYR+L  EF  DVGLMTGDVT+
Sbjct: 140 SAHTSAGKTTVAEYAIAMSMRDNQRVIYTSPIKALSNQKYRDLADEFGSDVGLMTGDVTI 199

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +PNASC++MTTEILR MLYRGS+V +EV WVIFDE+HYM+DR+RGV      I LP  ++
Sbjct: 200 NPNASCMIMTTEILRSMLYRGSDVCREVKWVIFDEVHYMRDRDRGV------ILLPDTVR 253

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            VFLSAT+ NA +FAEWIC +  QPCH++YTD+RP PLQHYV+P  G G+YL VDEK +F
Sbjct: 254 FVFLSATIPNAREFAEWICRIKHQPCHLIYTDYRPVPLQHYVYPSMGDGVYLTVDEKGKF 313

Query: 276 REDNFVKLQDTFLK------QKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKF 329
           REDN+ K  +   K      Q   G + N K   +  K       SD+ K+V+M  +R +
Sbjct: 314 REDNYGKAVEILEKNTEQASQSTKGLKSNKKKQQQHTK------NSDLLKVVRMCSDRAY 367

Query: 330 QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
            PVIVF+FS++ECEQ+A+ +  +D  TQ+EK  +  VF+NA+  L+ EDR L  I+ ML 
Sbjct: 368 LPVIVFAFSKKECEQNALVLRNIDLVTQDEKALIGDVFENAMATLSPEDRELQQIQSMLG 427

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            L RGI +HH GLLP++KE+VE+LFQE L+K LF TETFAMG+NMPAKTVVFT+++KWDG
Sbjct: 428 FLSRGIGIHHGGLLPILKEIVEILFQENLIKVLFCTETFAMGVNMPAKTVVFTSIQKWDG 487

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
              R + SGEYIQM+GRAGRRGKDD+G+ IIM+ +++E NT KDM LG  + L S F L 
Sbjct: 488 IERRTLNSGEYIQMAGRAGRRGKDDKGLVIIMLTDKVEPNTAKDMFLGDASRLDSQFYLG 547

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
           Y  +LN++ R EG     ++++ SF QFQ +K      +K S+L
Sbjct: 548 YNMLLNML-RLEG-VDPNYLLERSFSQFQKDKGCIAAKEKHSEL 589


>gi|66359948|ref|XP_627152.1| Mtr4p like SKI family SFII helicase [Cryptosporidium parvum Iowa
           II]
 gi|46228571|gb|EAK89441.1| Mtr4p like SKI family SFII helicase [Cryptosporidium parvum Iowa
           II]
          Length = 1280

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 281/522 (53%), Positives = 375/522 (71%), Gaps = 13/522 (2%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--AKTYSFELDPFQRVSVACLERNESV 94
           +CVHE   P GY    D  +   +     NG+   AK YSF+LD FQ VS+ CLE  ESV
Sbjct: 61  NCVHECIRPCGYVAPTDSKLRVQYDE---NGKKIPAKEYSFKLDTFQAVSIGCLEIGESV 117

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGD 152
           L+SAHTSAGKT VAEYAIAMA +  QRV+YTSP+KALSNQKYR+L   F D  VGL+TGD
Sbjct: 118 LISAHTSAGKTCVAEYAIAMALKSNQRVVYTSPIKALSNQKYRDLRTTFGDNNVGLLTGD 177

Query: 153 VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
           VT++P  S +VMTTEILR MLYRGSE+++E+AWVIFDEIHYM+D+ERGVVWEESII LP 
Sbjct: 178 VTVNPLGSIMVMTTEILRSMLYRGSELVREIAWVIFDEIHYMRDKERGVVWEESIILLPD 237

Query: 213 AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
            +++VFLSAT+ N  +FAEWIC    QPCHVVYTD+RP PLQH++FP GG+G+YLV+DE 
Sbjct: 238 TVRLVFLSATIPNHLEFAEWICRTKHQPCHVVYTDYRPVPLQHFIFPAGGNGVYLVMDEN 297

Query: 273 EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           + F++DN++K        KI     N     +    G      D+  IV M  ER + P+
Sbjct: 298 KVFKQDNYMKALSAL---KIAAE-SNSSQKEQKKHAGKAQLRVDLESIVNMCQERSYLPI 353

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           IVFSFS+++CE +A+S+  +D +T+EEK++++ +F +A+  L EEDRN+P +  MLPLL+
Sbjct: 354 IVFSFSKKDCELNALSLKNIDLSTEEEKESIDFIFNSALATLAEEDRNIPQVVGMLPLLR 413

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI +HH GLLPV+KE+VELLF E  +K LF+TETF+MG+NMPAKTV+FT+++K+DG  +
Sbjct: 414 RGIGIHHGGLLPVVKEIVELLFGESFIKVLFSTETFSMGINMPAKTVIFTSLRKFDGKEY 473

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R + SGE+IQMSGRAGRRG DDRGI I M+DE  +   +K M+ G+P  + S F + Y  
Sbjct: 474 RIVNSGEFIQMSGRAGRRGLDDRGITITMIDELADPWAIKSMLTGQPLRIDSQFYIGYNM 533

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
           +LNL+ R EG    E++I  SF QF   K    + +++++++
Sbjct: 534 LLNLL-RLEGA-DPEYMINRSFSQFLKRKKTVSLHEEINRIQ 573



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 8/216 (3%)

Query: 743  EIQQ-LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            EIQ+ L+    D+ +QK   EL    +VLK L + D + +VQLKGR AC I T DELL+T
Sbjct: 1070 EIQKDLREHEYDTIMQK---ELLGMRKVLKNLDYTDENSIVQLKGRIACEISTSDELLIT 1126

Query: 802  ELMFNGTF-NDLDHHQVAALASCFIPVDKSSEQINLR-MELAKPLQQLQESARKIAEIQN 859
            EL+FN  F  +L    + A+ S  +  D+    I L    LA     + + A+ I +I  
Sbjct: 1127 ELLFNNVFFQELKIEYIVAILSSLL-YDEKCPDIKLEDSTLAVGYDNILDVAKMIVKISL 1185

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            E  L ++  +Y+ S  RP +M +I  WSKG +FA +++ T  +EGS+IR  RRL+E L Q
Sbjct: 1186 ESGLNIDSTQYM-SKFRPQIMPIILKWSKGESFASILENTSFYEGSVIRCLRRLEELLRQ 1244

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + +A +++G  +LEKK       +RRGI+F+ SLYL
Sbjct: 1245 VASATKSIGNDDLEKKLKEGIALIRRGIVFTPSLYL 1280


>gi|67623323|ref|XP_667944.1| ATP-dependent RNA helicase; ATP-dependent RNA helicase
           [Cryptosporidium hominis TU502]
 gi|54659130|gb|EAL37723.1| ATP-dependent RNA helicase; ATP-dependent RNA helicase
           [Cryptosporidium hominis]
          Length = 1280

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 281/522 (53%), Positives = 375/522 (71%), Gaps = 13/522 (2%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM--AKTYSFELDPFQRVSVACLERNESV 94
           +CVHE   P GY    D  +   +     NG+   AK YSF+LD FQ VS+ CLE  ESV
Sbjct: 61  NCVHECIRPCGYVAPTDSKLRVQYDE---NGKKIPAKEYSFKLDTFQAVSIGCLEIGESV 117

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGD 152
           L+SAHTSAGKT VAEYAIAMA +  QRV+YTSP+KALSNQKYR+L   F D  VGL+TGD
Sbjct: 118 LISAHTSAGKTCVAEYAIAMALKSNQRVVYTSPIKALSNQKYRDLRTTFGDNNVGLLTGD 177

Query: 153 VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
           VT++P  S +VMTTEILR MLYRGSE+++E+AWVIFDEIHYM+D+ERGVVWEESII LP 
Sbjct: 178 VTVNPLGSIMVMTTEILRSMLYRGSELVREIAWVIFDEIHYMRDKERGVVWEESIILLPD 237

Query: 213 AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
            +++VFLSAT+ N  +FAEWIC    QPCHVVYTD+RP PLQH++FP GG+G+YLV+DE 
Sbjct: 238 TVRLVFLSATIPNHLEFAEWICRTKHQPCHVVYTDYRPVPLQHFIFPAGGNGVYLVMDEN 297

Query: 273 EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           + F++DN++K        KI     N     +    G      D+  IV M  ER + P+
Sbjct: 298 KVFKQDNYMKALSAL---KIAAE-SNSSQKEQKKHAGKAQLRVDLESIVNMCQERSYLPI 353

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           IVFSFS+++CE +A+S+  +D +T+EEK++++ +F +A+  L EEDRN+P +  MLPLL+
Sbjct: 354 IVFSFSKKDCELNALSLKNIDLSTEEEKESIDFIFNSALATLAEEDRNIPQVVGMLPLLR 413

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI +HH GLLPV+KE+VELLF E  +K LF+TETF+MG+NMPAKTV+FT+++K+DG  +
Sbjct: 414 RGIGIHHGGLLPVVKEIVELLFGESFIKVLFSTETFSMGINMPAKTVIFTSLRKFDGKEY 473

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R + SGE+IQMSGRAGRRG DDRGI I M+DE  +   +K M+ G+P  + S F + Y  
Sbjct: 474 RIVNSGEFIQMSGRAGRRGLDDRGITITMIDELADPWAIKSMLTGQPLRIDSQFYIGYNM 533

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
           +LNL+ R EG    E++I  SF QF   K    + +++++++
Sbjct: 534 LLNLL-RLEGA-DPEYMINRSFSQFLKRKKTVSLHEEINRIQ 573



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/216 (39%), Positives = 127/216 (58%), Gaps = 8/216 (3%)

Query: 743  EIQQ-LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            EIQ+ L+    D+ +QK   EL    +VLK L + D + +VQLKGR AC I T DELL+T
Sbjct: 1070 EIQKDLREHEYDTIMQK---ELLGMRKVLKNLDYTDENSIVQLKGRIACEISTSDELLIT 1126

Query: 802  ELMFNGTF-NDLDHHQVAALASCFIPVDKSSEQINLR-MELAKPLQQLQESARKIAEIQN 859
            EL+FN  F  +L    + A+ S  +  D+    I L    LA     + + A+ I +I  
Sbjct: 1127 ELLFNNVFFQELKIEYIVAILSSLL-YDEKCPDIKLEDSTLAVGYDNILDVAKMIVKISL 1185

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            E  L ++  +Y+ S  RP +M +I  WSKG +FA +++ T  +EGS+IR  RRL+E L Q
Sbjct: 1186 ESGLNIDSTQYM-SKFRPQIMPIILKWSKGESFASILENTSFYEGSVIRCLRRLEELLRQ 1244

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + +A +++G  +LEKK       +RRGI+F+ SLYL
Sbjct: 1245 VASATKSIGNDDLEKKLKEGIALIRRGIVFTPSLYL 1280


>gi|68076863|ref|XP_680351.1| ATP dependent RNA helicase [Plasmodium berghei strain ANKA]
 gi|56501272|emb|CAH98487.1| ATP dependent RNA helicase, putative [Plasmodium berghei]
          Length = 1299

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 285/572 (49%), Positives = 393/572 (68%), Gaps = 30/572 (5%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+   P  Y       +H   +  +     A+TY FELD FQ+ S+ CLERNESVLV
Sbjct: 183 NCIHKCVRPQSY-------VHNKLSESI---TPARTYKFELDTFQKKSIECLERNESVLV 232

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD++++
Sbjct: 233 SAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISIN 292

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++ 
Sbjct: 293 PEASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVRF 352

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F+
Sbjct: 353 IFLSATIPNGIQFAEWVSSIKNQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKNFK 412

Query: 277 EDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           +DNF+K    L+D  +  +      N K + RM K        DI KIV+M   R + P+
Sbjct: 413 KDNFIKAVNALKDKSMLDENNQSGGNNKFNKRMRK-----NTYDIEKIVQMCHSRNYTPL 467

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           I+F+FS++ECE +A ++ K++     EK+ ++++++NA+  L ++DR LP ++ +LPLL 
Sbjct: 468 IIFAFSKKECEVNATTLHKVNLTDDSEKEIIKELYENAIQILADDDRALPQVQFILPLLL 527

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI +HH GLLP+IKE++E++FQE L+K LF+TETF+MG+NMPAKTVVFT++KK+DG   
Sbjct: 528 RGIGIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLKKFDGLEK 587

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R I SGEYIQM+GRAGRRG DDRGI IIM+D  +     + + +G+   LVS F L Y  
Sbjct: 588 RLITSGEYIQMAGRAGRRGLDDRGIVIIMLDSPLHWKDAEKLFVGEANRLVSQFHLGYNM 647

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD---IGKKVSKLEEEAAS------LDAS 563
           ILNL+ R EG  T E +I+ SF Q+Q +K L +     KKV +  +E  +      LD +
Sbjct: 648 ILNLL-RIEG-ITPEFMIERSFIQYQMKKNLFEQIFASKKVEQKSQEILNILTNIYLDQN 705

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSEITRPERV 595
           G+     Y   ++    +E  L ++  + ER 
Sbjct: 706 GDEFTKAYLLNQVKTNDVETILKNKNVKNERT 737



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 113/188 (60%), Gaps = 3/188 (1%)

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            +  K  + + + VV +KG+ A  I + DEL++ EL F+  F+   +  + AL SCF+  +
Sbjct: 1114 ITNKNNNDEKNYVVTMKGQIASAILSVDELVI-ELFFSNFFSKYTYDYICALLSCFVYDE 1172

Query: 829  KSSEQINLRME-LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
             ++++I +    L +  QQ+ ++A  IA   N+C + +NV +Y+E   +  +M ++  W+
Sbjct: 1173 STNKEITINDPILIEGYQQIIKTATIIANKMNQCGMNINVKDYLEK-FKSAIMPIVLLWA 1231

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            +G +F E++  + I+EGSIIR+ RRLDE L Q+  A + +   N+ +    A++ LRRGI
Sbjct: 1232 RGHSFMEILADSQIYEGSIIRTLRRLDELLRQMICAFRGINNDNMCEILTTATKKLRRGI 1291

Query: 948  MFSNSLYL 955
             FS SLYL
Sbjct: 1292 PFSPSLYL 1299


>gi|154292208|ref|XP_001546680.1| hypothetical protein BC1G_14187 [Botryotinia fuckeliana B05.10]
          Length = 990

 Score =  588 bits (1515), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 314/764 (41%), Positives = 471/764 (61%), Gaps = 52/764 (6%)

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-----G 294
           PCH+VYTDFRPTPLQHY FP G  G++L+VDEK  FREDNF K   T   +K        
Sbjct: 231 PCHIVYTDFRPTPLQHYFFPAGADGIHLIVDEKGNFREDNFSKAMATIEDKKGSDPADIN 290

Query: 295 RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
            ++ G+   +    G+   GSDI+KIV+MIM + + PVIVFSFS+RECE +A+ MS + F
Sbjct: 291 AKQKGRGKDKKTNKGANKEGSDIYKIVRMIMLKHYNPVIVFSFSKRECEAYALQMSSMAF 350

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
           N Q EKD V +VF++A++ L+EEDR LP I+ +LPLL+RGI VHHSGLLP++KE +E+LF
Sbjct: 351 NDQSEKDMVSKVFESAIESLSEEDRTLPQIQHILPLLRRGIGVHHSGLLPILKETIEILF 410

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
           QE L+K LFATETF++GLNMPAKTVVFT+V+K+DG+  RY+   E++QMSGRAGRRG DD
Sbjct: 411 QENLIKVLFATETFSIGLNMPAKTVVFTSVEKFDGEKMRYLTPSEFVQMSGRAGRRGLDD 470

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
           RGI I+M++++ME  + K +V G+   L S F L Y  ILNLM R EG  + E ++++ F
Sbjct: 471 RGIVIMMINDKMEPESAKTIVRGEQDKLNSAFYLGYNMILNLM-RLEG-ISPEFMLEHCF 528

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPER 594
           +QFQ   ++  + K++  L+     +    EA + +Y+ L+  +    K +   I  P  
Sbjct: 529 YQFQNTSSVTGLEKELQDLQIARDEVQIPDEATIKDYYDLRQQLTTYTKDMRDVINHPNY 588

Query: 595 VLYYLGSGRLIKVREGGTDWGWGVVVN-VVKKPSAG------------------------ 629
            L ++  GR++ ++    D+GWG VV    ++P  G                        
Sbjct: 589 CLQFMQPGRVVHIKHQDHDFGWGAVVKFTARRPGKGSAQEFPPQQAYILDVLLLVSSDST 648

Query: 630 ----------VGTLP----SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLA 675
                     +G +P     +G   IVPV L  +  +  +R+ +P DL P + R  +  +
Sbjct: 649 VTTQTQNDLPLGIMPPAAGDKGKMEIVPVLLSCVEAIGHVRIFLPKDLHPANERNQVRKS 708

Query: 676 VQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCF 734
           ++E++ RFP G+  L+P+++M I D     L+ +IE LE +L ++PL N  +  +    +
Sbjct: 709 LEEVKRRFPDGIAVLDPIENMGITDDSFKRLLRKIEVLESRLLSNPLHNSPRLPDLYNQY 768

Query: 735 QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI-D 793
             K E   +I++ +  +  +      DELK+R RVL++LG I+   VV+LK R AC I  
Sbjct: 769 AGKLEFTKQIKEKRKAIASALSIMQLDELKSRKRVLRRLGFINEQEVVELKARVACEISS 828

Query: 794 TGD--ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
           TGD  ELL++EL+FNG FNDL     AA+ S FI  ++ S+   L+ ELA   +++Q  A
Sbjct: 829 TGDGHELLLSELLFNGYFNDLTPEMCAAVLSVFI-FEEKSQCPPLKEELAAKYREIQAQA 887

Query: 852 RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
           R +A++  E KL++N +EYV ++ +  LM+V+Y W++G +FAE+ +MTD++EGS+IR  R
Sbjct: 888 RIVAKVTAESKLKMNEEEYV-TSFKWQLMEVVYVWAQGKSFAEICKMTDVYEGSLIRLFR 946

Query: 912 RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           RL+E L Q+  A + +G  ++  KF  + + +RR I+ + SLYL
Sbjct: 947 RLEELLRQMAQAGKVMGSDDISNKFDESLKKIRRDIVAAQSLYL 990



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 83/127 (65%), Gaps = 11/127 (8%)

Query: 19  VTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELD 78
           + G PEE +   Q N+     H+V++P  Y        H   A P      A+T+ FELD
Sbjct: 115 LQGAPEETALVLQHNIQ----HQVSLPPDYEYIPISQ-HKAPAEP------ARTWPFELD 163

Query: 79  PFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRE 138
           PFQ+V++A ++RNESVLVSAHTSAGKT  AEYAIA   ++ QRVIYTSP+KALSNQKYRE
Sbjct: 164 PFQKVAIASIQRNESVLVSAHTSAGKTVTAEYAIAQCLKNNQRVIYTSPIKALSNQKYRE 223

Query: 139 LHQEFKD 145
              +F D
Sbjct: 224 FTADFGD 230


>gi|226467528|emb|CAX69640.1| putative RIKEN cDNA 2610528A15 [Schistosoma japonicum]
          Length = 615

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 280/544 (51%), Positives = 386/544 (70%), Gaps = 36/544 (6%)

Query: 11  KAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGY---ALTKDEAIHGTFANPVYNG 67
            AP   +H   +PE            +C HEVAVP       + KD             G
Sbjct: 76  NAPRIQIHKISSPE------------TCTHEVAVPPDVEYKPIVKD------------CG 111

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
             A+T+ F LD FQ+ ++ C++ N+SVL+SAHTSAGKT VAEYAIA A R+KQRVIYT+P
Sbjct: 112 SPARTFPFTLDAFQQQAIICIDNNQSVLLSAHTSAGKTVVAEYAIATALREKQRVIYTTP 171

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYRE  + F +VGL+TGD T++P+AS L+MTTEIL+ MLY+G+ +++EV WVI
Sbjct: 172 IKALSNQKYREFFEAFPEVGLLTGDATINPSASVLIMTTEILQSMLYKGASMVREVGWVI 231

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDEIHYM+D ERGVVWEE+I+ LP +++ VFLSAT+ NA QFAEWI HLH QPCHVV +D
Sbjct: 232 FDEIHYMRDPERGVVWEETIVLLPDSVRYVFLSATIPNARQFAEWISHLHHQPCHVVSSD 291

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            RP PL+HY++P+G  GL+LV+DE  ++ E NF +   +FL  +   RR+  +       
Sbjct: 292 CRPVPLRHYLYPLGSEGLFLVLDEG-KYLEQNFERAMRSFLSDESSNRRQKSQVD----- 345

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
             +    +++ +IV+++  R  +P+IVFSFS++ECE +A+ ++K DF T  EK  V++VF
Sbjct: 346 -YNKRSENNVIQIVRLVKHRSLEPIIVFSFSKKECEIYALQLAKFDFTTDAEKKVVDEVF 404

Query: 368 QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
           +NA+D L+ EDR+LP +E +LPLLKRGI +HH GLLP++KE +E+LF E L+K LFATET
Sbjct: 405 RNAIDGLSPEDRSLPQVESVLPLLKRGIGIHHGGLLPLLKETIEILFSENLIKCLFATET 464

Query: 428 FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
           FAMGLNMPA+TV+FT+ +K+DG S+R+I SGEYIQMSGRAGRRGKDD G  I+MVDE M 
Sbjct: 465 FAMGLNMPARTVLFTSARKYDGHSYRWITSGEYIQMSGRAGRRGKDDSGTVILMVDESMT 524

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
                 +++G P PL S F ++Y  +LNL+ R E +   E++++ SF QFQ   +LP++ 
Sbjct: 525 SELAHQIMMGPPPPLNSAFHITYNMLLNLL-RVE-EINPEYMMERSFCQFQNYASLPNMY 582

Query: 548 KKVS 551
           K+++
Sbjct: 583 KELN 586


>gi|86170414|ref|XP_966011.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
 gi|46362253|emb|CAG25191.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
          Length = 1350

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 275/513 (53%), Positives = 371/513 (72%), Gaps = 24/513 (4%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+   P  Y       +H     P+     A+TY FELD FQ+ S+ CLERNESVLV
Sbjct: 225 NCIHKCVRPQSY-------VHNEIKEPLI---PARTYKFELDTFQKKSIECLERNESVLV 274

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD++++
Sbjct: 275 SAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLGEEFKDVGLITGDISIN 334

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++ 
Sbjct: 335 PEASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVRF 394

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F+
Sbjct: 395 IFLSATIPNGIQFAEWVSSIKSQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKDFK 454

Query: 277 EDNFVKLQDTFLKQKIGGRREN------GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ 330
           +DNF+K  +  +K+K+    EN       K + +M K        DI KIV+M   R + 
Sbjct: 455 KDNFIKAVNV-IKEKMNTSEENHHQQHINKYTKKMRK-----TTYDIEKIVQMCHSRNYT 508

Query: 331 PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           P+I+F+FS++ECE +A +M K+D  +  EK+ ++++++NA+  L ++DR+LP ++ +LPL
Sbjct: 509 PLIIFAFSKKECEVNATAMHKIDLTSDTEKEVIKELYENAIRILADDDRSLPQVQFILPL 568

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L RGI +HH GLLP+IKE++E++FQE L+K LF+TETF+MG+NMPAKTVVFT++ K+DG 
Sbjct: 569 LLRGIGIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLTKFDGL 628

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
             R I SGEYIQM+GRAGRRG DDRGI IIM+D  +       + +G+   LVS F L Y
Sbjct: 629 EKRLITSGEYIQMAGRAGRRGLDDRGIVIIMLDTPLHWREAHKLFVGEANRLVSQFHLGY 688

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
             ILNL+ R EG  T E +I+ SF Q+Q +K L
Sbjct: 689 NMILNLL-RIEG-ITPEFMIERSFIQYQMKKNL 719



 Score =  123 bits (309), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 127/224 (56%), Gaps = 8/224 (3%)

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK------KLGHIDADGVVQLKGRAACLI 792
            EV++ ++ LK++     I+    E     R++       K  H + + VV +KG+ A  I
Sbjct: 1128 EVSYNLENLKNEKDIKTIENSITEHIKNERIMNIKNETYKNNHEEKNYVVTMKGQIASAI 1187

Query: 793  DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME-LAKPLQQLQESA 851
             + DEL+++EL F+  F+  ++  + A  SCF+  + +S++I +    L +  QQ+ ++A
Sbjct: 1188 LSVDELVISELFFSNFFSKYNYDYICAFLSCFVYDESTSKEITINDPILVEGYQQIIKTA 1247

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
              +A   NEC + +N+ +Y++   +  +M +   W++G +F E++  + I+EGSIIR+ R
Sbjct: 1248 NHVATKMNECGMNINLKDYIDK-FKSAIMPIALLWARGHSFVEILSDSQIYEGSIIRTLR 1306

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDE + Q+  A + +   ++ +    A+  LRRGI FS SLYL
Sbjct: 1307 RLDELIRQMICAFRGINNDSMCETLTLATNKLRRGIPFSPSLYL 1350


>gi|83282250|ref|XP_729688.1| Homo sapiens KIAA0052 protein [Plasmodium yoelii yoelii 17XNL]
 gi|23488188|gb|EAA21253.1| Homo sapiens KIAA0052 protein-related [Plasmodium yoelii yoelii]
          Length = 1309

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 273/511 (53%), Positives = 369/511 (72%), Gaps = 21/511 (4%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+   P  Y       +H   +  +     A+TY FELD FQ+ S+ CLERNESVLV
Sbjct: 183 NCIHKCVRPQSY-------VHNKLSESI---TPARTYKFELDTFQKKSIECLERNESVLV 232

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD++++
Sbjct: 233 SAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISIN 292

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++ 
Sbjct: 293 PEASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVRF 352

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F+
Sbjct: 353 IFLSATIPNGIQFAEWVSSIKNQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKNFK 412

Query: 277 EDNFVK----LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           +DNF+K    L+D  +  +      N K + RM K        DI KIV+M   R + P+
Sbjct: 413 KDNFIKAVNALKDRSMLDENNQSGGNNKFNKRMRK-----NTYDIEKIVQMCHSRNYTPL 467

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           I+F+FS++ECE +A ++ K++     EK+ ++++++NA+  L ++DR LP ++ +LPLL 
Sbjct: 468 IIFAFSKKECEVNATTLHKVNLTDDSEKEVIKELYENAIQILADDDRALPQVQFILPLLL 527

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI +HH GLLP+IKE++E++FQE L+K LF+TETF+MG+NMPAKTVVFT++KK+DG   
Sbjct: 528 RGIGIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLKKFDGLEK 587

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R I SGEYIQM+GRAGRRG DDRGI IIM+D  +     + + +G+   LVS F L Y  
Sbjct: 588 RLITSGEYIQMAGRAGRRGLDDRGIVIIMLDSPLHWKDAEKLFVGEANRLVSQFHLGYNM 647

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           ILNL+ R EG  T E +I+ SF Q+Q +K L
Sbjct: 648 ILNLL-RIEG-ITPEFMIERSFIQYQMKKNL 676



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 120/207 (57%), Gaps = 2/207 (0%)

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            K  D+  +K   +    + +  K  + + + VV +KG+ A  I + DEL+++EL F+  F
Sbjct: 1104 KQIDTINEKLLTQSDTHNDITNKNNNDEKNYVVTMKGQIASAILSVDELVISELFFSNFF 1163

Query: 810  NDLDHHQVAALASCFIPVDKSSEQINLRME-LAKPLQQLQESARKIAEIQNECKLEVNVD 868
            +   +  + A  SCF+  + ++++I +    L +  QQ+ ++A  IA   N+C + +NV 
Sbjct: 1164 SKYTYDYICAFLSCFVYDESTNKEITINDPILIEGYQQITKTATIIANKMNQCGMNINVK 1223

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            +Y+E   +  +M ++  W++G +F E++  + I+EGSIIR+ RRLDE L Q+  A + + 
Sbjct: 1224 DYLEK-FKSAIMPIVLLWARGHSFMEILADSQIYEGSIIRTLRRLDELLRQMICAFRGIN 1282

Query: 929  EVNLEKKFAAASESLRRGIMFSNSLYL 955
              N+ +    A++ LRRGI FS SLYL
Sbjct: 1283 NDNMCEILTTATKKLRRGIPFSPSLYL 1309


>gi|326428725|gb|EGD74295.1| ATP-dependent DEAD/H RNA helicase [Salpingoeca sp. ATCC 50818]
          Length = 1363

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 357/1004 (35%), Positives = 568/1004 (56%), Gaps = 87/1004 (8%)

Query: 21   GTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEM-----AKTYSF 75
            G  EE     +  LT++     A  +G   TK+ AI       V + E      A TY F
Sbjct: 373  GAKEEVEEDLEAALTKTYAQANAQSTGQEQTKNWAITIPVKAKVEDFEFQVPNPAITYPF 432

Query: 76   ELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQK 135
            ELD FQ+ ++ C+ER+ESV V+AHTSAGKT VAEYAIAM+ +   RVIYTSP+KALSNQK
Sbjct: 433  ELDDFQKQAIICMERHESVFVAAHTSAGKTVVAEYAIAMSQKHMTRVIYTSPIKALSNQK 492

Query: 136  YRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMK 195
            +R+    F DVGL+TGDV + P+ASCL+MTTEILR MLYRG++++++V WVIFDE+HY+ 
Sbjct: 493  FRDFATRFDDVGLLTGDVQIRPDASCLIMTTEILRSMLYRGADMIRDVEWVIFDEVHYIN 552

Query: 196  DRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQH 255
            + ERGVVWEE+II LP  + +V LSAT+ N  +FA+W+    KQ  +V++T  RP PL+H
Sbjct: 553  NAERGVVWEETIIMLPKHVNVVMLSATVPNTFEFADWVGRTRKQRVYVIHTPKRPVPLEH 612

Query: 256  YVFPVGGSG----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN-GKASGRMA---- 306
            +++ VG  G    L+ +VD   +F   N            + G++E  GK + +      
Sbjct: 613  FLY-VGKVGKADPLFKIVDAHGKFHMKNH--------SAAVAGKKEGEGKKAAKTGSYGP 663

Query: 307  -KGGSGSGGSD--IFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             K G+ S G D  +++ +V+M+ +    P +VF+FS++ C+Q+A ++    FNT EE+  
Sbjct: 664  KKRGNASWGGDRVLYRSLVQMLKKENLNPCVVFTFSKKRCDQNAYNLRGTSFNTAEEEGR 723

Query: 363  VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            V  +F  ++  L   D +LP +E +  +++ G+ VHHSGLLP++KELVE+LF +GL+K L
Sbjct: 724  VNAIFHRSISILKGSDAHLPQVERIKAMVRHGVGVHHSGLLPIMKELVEILFSQGLIKVL 783

Query: 423  FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
            FATETFAMG+NMPAK VVF +++K DG   R +  GEY+QM+GRAGRRG D  G  I++ 
Sbjct: 784  FATETFAMGVNMPAKCVVFDSIRKHDGIQLRDLLPGEYVQMAGRAGRRGLDTTGTVIVLC 843

Query: 483  DEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
               + ++N+L  ++LGKP  L S FRL+Y  ILNL+ R E     E +++ SF +   ++
Sbjct: 844  KGDVPDVNSLHTVMLGKPTVLASRFRLTYNMILNLL-RVE-DLRVEDMMRQSFSEADLQR 901

Query: 542  ALPDIGKKVSKLEEEAASLDASGEAE----VAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
               +   +   L E  A L   G  E    + EY+ L ++      ++M+ I      + 
Sbjct: 902  ---ETSSQRQALVEGQAQLAVLGSEEFPSDLEEYYTLAVEYLDASHRMMAAILASNNAMR 958

Query: 598  YLGS-GRLIKVREGGTDWGWGVVVNVVKK---PSA------------------------- 628
             +G+ GR++ V          VV+  +K    P+A                         
Sbjct: 959  IVGAEGRVVVVNSQMYRNTLAVVLRTMKSSNGPAAPKDFEVLIMVDETSKQKPGQRKEKT 1018

Query: 629  ----GVGTLP------SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPL----DARQSILL 674
                 +  LP       +G      V++     ++     +P D + +    +A +  ++
Sbjct: 1019 NKEESLLPLPVTHLDVPQGAVSHAIVRIAGTDIVAITGEKIPVDKKKVVQQRNATECTMV 1078

Query: 675  AVQ--ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI- 731
            A Q  +L ++  + L +L+P+KD+ ++  E  D   +++ L  +L         D   + 
Sbjct: 1079 AQQLQQLAAKGLESLSQLHPIKDLGVKQLEAADAHTRMKALYKQLSGFECTSHPDFTSMY 1138

Query: 732  -RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
             R  +R+  +N +I  L+ ++ D  +     E + R  V+++L  I+++ +VQLKGR AC
Sbjct: 1139 GRLHERRVLMN-QIDSLQHQLSDRNL-TLLPEYEQRIEVMQRLQFINSERIVQLKGRVAC 1196

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             I T +ELLVT+L+F+     LD  +V AL SC +  ++ + +  L   L + +  +   
Sbjct: 1197 EITTCNELLVTQLIFHDILTPLDPEEVVALLSCMVFQNRRASEPRLTPRLEEGVSTITRM 1256

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            A +IAE Q  C ++V+V+EY+E   +  L++V+Y W++G  F ++ ++TD  EGSI+R  
Sbjct: 1257 AIEIAETQLACGMQVSVEEYLEE-FKFGLVEVVYEWARGMAFKQITELTDEPEGSIVRCI 1315

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             RL++   ++R AA+ +G+  L +K   A+  ++R I+F+ SLY
Sbjct: 1316 IRLEQACREVRNAARVIGDPVLSQKMEQAANMIKRDIVFAASLY 1359


>gi|209877104|ref|XP_002139994.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
 gi|209555600|gb|EEA05645.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
          Length = 1447

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 283/531 (53%), Positives = 373/531 (70%), Gaps = 14/531 (2%)

Query: 36  RSCVHEVAVPSGY---ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
           ++CVHE   P  Y     +K E  + +    +     AK YSF+LD FQ VS+ CLE  E
Sbjct: 143 KNCVHECVRPCSYVAPTTSKFEVEYDSDGKKI----PAKVYSFKLDTFQAVSIECLEIGE 198

Query: 93  SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMT 150
           S+LVSAHTSAGKT VAEYAIAMA R  QRV+YTSP+KALSNQKYR+L   F D  VGL+T
Sbjct: 199 SILVSAHTSAGKTCVAEYAIAMALRSNQRVVYTSPIKALSNQKYRDLRSTFGDGNVGLLT 258

Query: 151 GDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFL 210
           GDVT++P AS +VMTTEILR MLYRGSE+++E+AWVIFDEIHYM+D+ERGVVWEESII L
Sbjct: 259 GDVTVNPLASIMVMTTEILRSMLYRGSELVREIAWVIFDEIHYMRDKERGVVWEESIILL 318

Query: 211 PPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD 270
           P  +++VFLSAT+ N  +FAEWIC    QPCHVVYTD+RP PLQH+VFP GG+G+YLV+D
Sbjct: 319 PDTVRLVFLSATIPNHLEFAEWICRTKHQPCHVVYTDYRPVPLQHFVFPAGGTGVYLVMD 378

Query: 271 EKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ 330
           E + FREDN+ K   +    K+     + +      K        D+  IV M  ER + 
Sbjct: 379 ENKIFREDNYSKALSSL---KLTTEERSNRVGEFKKKNTRSQLRIDLENIVNMCQERNYL 435

Query: 331 PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           P+IVFSFS+++CE +AM +   D    EEK++++ +FQ+A+  L EEDRN+P +  MLPL
Sbjct: 436 PIIVFSFSKKDCETNAMYLGSTDLTNSEEKESIDFIFQSALATLAEEDRNIPQVVGMLPL 495

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L+RGI +HH GLLPV+KE+VE+LF E  +K LF+TETF+MG+NMPAKTV+FT+++K+DG 
Sbjct: 496 LRRGIGIHHGGLLPVVKEIVEILFGESFIKVLFSTETFSMGINMPAKTVIFTSLRKFDGK 555

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
             R I SGE+IQMSGRAGRRG DDRG+ IIM+DEQ +   +K +  G P  + S F + Y
Sbjct: 556 ESRLINSGEFIQMSGRAGRRGLDDRGLTIIMLDEQADPWAVKAIFTGDPLRIDSQFYIGY 615

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
             +LNL+ R EG    E++I+ SF QF   +    + ++  ++E+  +  D
Sbjct: 616 NMLLNLL-RLEGA-DPEYMIQRSFSQFLKRRKTVSLNEEKKRIEKIISKYD 664



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 117/195 (60%), Gaps = 2/195 (1%)

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF-NDLDHHQVAAL 820
            EL +  +VL+ L +ID + VVQLKGR AC I T DELL+TEL+FN TF  +L+   + A+
Sbjct: 1254 ELSSMRKVLRSLDYIDKNNVVQLKGRVACEISTSDELLITELLFNNTFFQELNIEYIVAI 1313

Query: 821  ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLM 880
             SC +  +K  +       L    + LQ+  R I ++  +  L +   EY+ S  +P +M
Sbjct: 1314 LSCLLYDEKCQDMKLDNSILLTGFENLQKVGRMIIKVSQDSGLTITETEYL-SKFKPQIM 1372

Query: 881  DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
             +I  W KG +FA  ++ T+ +EGS+IR  RRL+E L Q+ +A +++G  +LE K     
Sbjct: 1373 PIILKWCKGESFANTLENTNFYEGSVIRCLRRLEELLRQVASACKSIGNEDLENKLRHGI 1432

Query: 941  ESLRRGIMFSNSLYL 955
              +RRGI+F+ SLYL
Sbjct: 1433 ALIRRGIVFTASLYL 1447


>gi|167516802|ref|XP_001742742.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163779366|gb|EDQ92980.1| predicted protein [Monosiga brevicollis MX1]
          Length = 998

 Score =  583 bits (1504), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 358/957 (37%), Positives = 539/957 (56%), Gaps = 89/957 (9%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ FELD FQ+ +V  +E++ESV V+AHTSAGKT VAEYAIA+  +   R IYTSP+K
Sbjct: 57  AYTWPFELDTFQKQAVVRMEQHESVFVAAHTSAGKTVVAEYAIALCQKHMTRCIYTSPIK 116

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYR+    F+DVGL+TGDV + P A+CL+MTTEILR MLYRG++++++V WVIFD
Sbjct: 117 ALSNQKYRDFRDRFEDVGLLTGDVQIKPAAACLIMTTEILRSMLYRGADLIRDVEWVIFD 176

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHY+ D +RGVVWEE II LP  I +V LSAT+ N  QFA+W+    K+  HV+ T  R
Sbjct: 177 EIHYINDSDRGVVWEEVIIMLPDHINIVMLSATVPNTFQFADWVGRTKKRQIHVISTAKR 236

Query: 250 PTPLQHYVFP----VGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
           P PL+H+++           Y +V+  +QF E  + K  ++   +K G          + 
Sbjct: 237 PVPLEHFLYTGNEVNATEHFYKIVNASKQFEELGYKKALESKKAKKSGKNSHRDNFGPKS 296

Query: 306 AKGGSGSGGSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
              G G     +++ +V+++  +  QP ++F+FS++ CE +A ++  LD  + EEK+ ++
Sbjct: 297 RDKGWGHSDKQLYQTLVRVLKNKDLQPCVIFTFSKKRCEDNADAVRSLDLTSPEEKNLIQ 356

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA--L 422
             F+ +V+ L   DR+LP +  M  LL+RG+ VHH GLLP++KE+VE+LF +GLVKA  L
Sbjct: 357 HFFRRSVNRLAGTDRDLPQVTRMRDLLQRGVGVHHGGLLPIMKEVVEMLFAQGLVKASVL 416

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPA+ VVF AV KWDG   R + +GEYIQM+GRAGRRG D  G  II+ 
Sbjct: 417 FATETFAMGVNMPARCVVFDAVSKWDGQDKRSLMAGEYIQMAGRAGRRGLDQTGTVIIIC 476

Query: 483 DEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
              + + + L  M+LGKP  L S FRL+Y  ILNL+ R E +   E +I+ SF +   ++
Sbjct: 477 KGDVPDRSVLHSMMLGKPTKLESRFRLTYNMILNLV-RVE-ELRVEDMIRRSFGEITTQQ 534

Query: 542 ALPDIGKKVSKLEE---EAASLDASGE----AEVAEYHKLKLDIAQLEKKLMSEITRPER 594
              + G++  +LEE     A+LD SGE    A+  E+++L         +L S  +   R
Sbjct: 535 ---NFGEREDELEETQGRLATLD-SGEKKMPADFQEFYEL--------TRLWSNESGQSR 582

Query: 595 VLYYLGSGRLIKVREGGTDWGWG--VVVNVVKKPSA---GVGTLPSRGGGYIVPVQLPLI 649
            L+ +   R  +  +G   +  G  VVVN     +A    +G      G  I  + L L+
Sbjct: 583 SLFLVWHARGRESIQGLKAFSLGRVVVVNSGSYRNALAIVLGWFDIHTGESIFQM-LVLV 641

Query: 650 STLSKIRLSVPPDLRPL----------DARQSILLAV----------------------- 676
               K + + P DL PL          D  QS+ + +                       
Sbjct: 642 EAQGKEQPAEPGDLLPLPLTILATPERDYCQSLAVELLNLAHKYNKVIALLCQHAATGIR 701

Query: 677 ------------------QELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
                              EL   +  GLP ++  KD+KI++  +V+    I  L  +L 
Sbjct: 702 QRQGKGGRLSDRSLGCVESELSHTYASGLPVVDIQKDLKIKELALVECNRDIHRLLEQLR 761

Query: 719 AHPLNKSQDENQIRC-FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
             P  +  +  Q+   +  +  +  ++Q+L+ K+ D+ + +   E + R  VL++L +I 
Sbjct: 762 NFPCTEHPNFVQLYAHYHERKTLEKQVQELEHKLSDANL-RLLPEYEQRMHVLERLDYIS 820

Query: 778 ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
           ++  V LKGR AC I T DE+L TEL+F    N+L+  ++ AL S  +  ++      L 
Sbjct: 821 SEQTVLLKGRVACEITTCDEVLATELVFGNHLNNLEPEEIVALLSALVFQERRVSAPTLT 880

Query: 838 MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
             L   ++ ++  A ++AE Q  C +   VDEY+E T+   L++V+Y W+ G  F ++  
Sbjct: 881 GRLEANVEVIKGVATRVAETQLACGMNTPVDEYLE-TLHFGLVEVVYEWACGMPFKQITG 939

Query: 898 MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
           +TD+ EGSI+R   RLDE    +R AA  VG+  L +K   AS+ ++R I+F+ SLY
Sbjct: 940 LTDVLEGSIVRCITRLDETCRDIRNAAHVVGDPRLFEKMQKASDLIKRDIVFAGSLY 996


>gi|389584791|dbj|GAB67523.1| ATP dependent RNA helicase [Plasmodium cynomolgi strain B]
          Length = 1401

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 275/512 (53%), Positives = 373/512 (72%), Gaps = 22/512 (4%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+   P  Y       +H   +  +     A+TY FELD FQ+ S+ CLERNESVLV
Sbjct: 222 NCIHKCIRPRSY-------VHNKLSETL---TPARTYKFELDTFQKKSIECLERNESVLV 271

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD++++
Sbjct: 272 SAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISIN 331

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P+AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++ 
Sbjct: 332 PDASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVRF 391

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F+
Sbjct: 392 IFLSATIPNGIQFAEWVSSIKSQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKDFK 451

Query: 277 EDNFVKLQDTFLKQKIG----GRRENGKAS-GRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
           ++NF+K  +  +K+K      G+ +NG +   R AK        DI KIV+M   R + P
Sbjct: 452 KNNFIKAVNA-IKEKNNMSEDGQHQNGNSKHNRRAKKNV----YDIEKIVQMCHSRNYTP 506

Query: 332 VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
           +I+F+FS++ECE +A +M K+D     EK+ ++++++NA+  L ++DR LP ++ +LPLL
Sbjct: 507 LIIFAFSKKECEINATTMHKVDLTDDTEKEVIKELYENAIQILADDDRALPQVQFILPLL 566

Query: 392 KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            RGI +HH GLLP+IKE++E++FQE L+K LF+TETF+MG+NMPAKTVVFT++KK+DG  
Sbjct: 567 LRGIGIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLKKFDGVE 626

Query: 452 HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
            R I SGEYIQM+GRAGRRG DDRGI IIM+D  +     + + +G+   LVS F L Y 
Sbjct: 627 KRLITSGEYIQMAGRAGRRGLDDRGIVIIMLDSPLHWREAEKLFVGEANRLVSQFHLGYN 686

Query: 512 SILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            ILNL+ R EG  T E +I+ SF Q+Q +K L
Sbjct: 687 MILNLL-RIEG-ITPEFMIERSFIQYQMKKNL 716



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 108/176 (61%), Gaps = 2/176 (1%)

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME- 839
            VV +KG+ A  I + DEL+++EL F+  F+  ++  + A  SCF+  + S++++ +    
Sbjct: 1227 VVTMKGQIASAILSVDELVISELFFSNFFSKYNYDYICAFLSCFVYDESSNKEVAINDPV 1286

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            L +  +Q+ ++A  ++   NEC + +N+ +Y++   +  +M ++  W +G +F E++  +
Sbjct: 1287 LVEGYEQIIKTATHLSNKMNECGMNINLKDYLDK-FKSAIMPIVLQWVRGYSFMEILTDS 1345

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             I+EGSIIR+ RRLDE L Q+  A + +   ++ +    A++ LRRGI FS SLYL
Sbjct: 1346 QIYEGSIIRTLRRLDELLRQMICAFRGINNDSMCEILTEATKKLRRGIPFSPSLYL 1401


>gi|221058304|ref|XP_002261660.1| ATP-dependant RNA helicase [Plasmodium knowlesi strain H]
 gi|194247665|emb|CAQ41065.1| ATP-dependant RNA helicase, putative [Plasmodium knowlesi strain H]
          Length = 1332

 Score =  579 bits (1492), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 269/508 (52%), Positives = 370/508 (72%), Gaps = 14/508 (2%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+   P  Y       +H   +  +     A+TY FELD FQ+ S+ CLERNESVLV
Sbjct: 201 NCIHKCIRPKSY-------VHNKLSETL---TPARTYKFELDTFQKKSIECLERNESVLV 250

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD++++
Sbjct: 251 SAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISIN 310

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
           P+AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++ 
Sbjct: 311 PDASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVRF 370

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F+
Sbjct: 371 IFLSATIPNGIQFAEWVSSIKSQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKDFK 430

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKG-GSGSGGSDIFKIVKMIMERKFQPVIVF 335
           ++NF+K  +  +K+K     +  + +G       +     DI KIV+M   R + P+I+F
Sbjct: 431 KNNFIKAVNA-IKEKNNMSEDTHQQNGNSRHNRRTKKNVHDIEKIVQMCHSRNYTPLIIF 489

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           +FS++ECE +A +M K+D     EK+ ++++++NA+  L ++DR LP ++ +LPLL RGI
Sbjct: 490 AFSKKECEVNATTMHKVDLTDDTEKEVIKELYENAIQILADDDRALPQVQFILPLLLRGI 549

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP+IKE++E++FQE L+K LF+TETF+MG+NMPAKTVVFT+++K+DG   R I
Sbjct: 550 GIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLRKFDGVEKRLI 609

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEYIQM+GRAGRRG DDRGI IIM+D  +     + + +G+   LVS F L Y  ILN
Sbjct: 610 TSGEYIQMAGRAGRRGLDDRGIVIIMLDSPLHWREAEKLFVGEANRLVSQFHLGYNMILN 669

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           L+ R EG  T E +I+ SF Q+Q +K+L
Sbjct: 670 LL-RIEG-ITPEFMIERSFIQYQMKKSL 695



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 107/176 (60%), Gaps = 2/176 (1%)

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME- 839
            VV +KG+ A  I + DEL+++EL F+  F+  ++  + A  SCF+  + +++++ +    
Sbjct: 1158 VVTMKGQIASAILSVDELVISELFFSNFFSKYNYDYICAFLSCFVYDESTNKEVAIEDPI 1217

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            L +  +Q+  +A  ++   NEC + +N+ +Y++   +  +M ++  W +G +F E++  +
Sbjct: 1218 LVEGYEQIIRTATHVSNKMNECGMSMNLKDYLDK-FKSAIMPIVLQWVRGYSFMEILTDS 1276

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             I+EGSIIR+ RRLDE L Q+  A + +   ++ +    A++ LRRGI FS SLYL
Sbjct: 1277 QIYEGSIIRTLRRLDELLRQMICAFRGINNDSMCEILTEATKKLRRGIPFSPSLYL 1332


>gi|330799980|ref|XP_003288018.1| hypothetical protein DICPUDRAFT_152207 [Dictyostelium purpureum]
 gi|325081977|gb|EGC35475.1| hypothetical protein DICPUDRAFT_152207 [Dictyostelium purpureum]
          Length = 1286

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 345/938 (36%), Positives = 546/938 (58%), Gaps = 64/938 (6%)

Query: 60   FANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
             ANP      A  Y FELD FQ+ ++  +E+ +SV ++AHTSAGKT +AEYAIAMA ++ 
Sbjct: 370  IANP------AIEYPFELDSFQKQAILHMEQGDSVFITAHTSAGKTVIAEYAIAMAAKNM 423

Query: 120  QRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
             R IYTSP+KALSNQK+R+    F DVGL+TGDV++SP +SCLV+TTEILR MLY+G+++
Sbjct: 424  TRAIYTSPIKALSNQKFRDFKNTFNDVGLITGDVSISPASSCLVLTTEILRSMLYKGADL 483

Query: 180  LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
            ++++ WVIFDE+HY+ D ERGVVWEE II LPP +KMVFLSAT+SN  +FA WI    + 
Sbjct: 484  IRDIEWVIFDEVHYLNDLERGVVWEEVIIMLPPYVKMVFLSATVSNPLEFANWIGRTKQI 543

Query: 240  PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
            P +V+ T  RP PL+HY+     + ++ +VD   +F    +    ++  K     +    
Sbjct: 544  PIYVIGTTKRPIPLEHYIH-TPSNEMFKIVDSTRKFLPGGYNDAFNSLYKNN-SNKPNQR 601

Query: 300  KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM-SKLDFNTQE 358
               G   +GGS +  S   K++  + +++  PVI+FSFS+ +C+++A S+ S ++     
Sbjct: 602  GGGGGARQGGSNNNSSGWSKLITTLKDKQQLPVIIFSFSKNKCQEYASSLGSTINLTQSN 661

Query: 359  EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
            EK  + Q  + ++  L E+D+ LP I  M  LL+RGI VHH GLLP++KELVE+LF + L
Sbjct: 662  EKSQIRQFIEQSLGRLCEDDKTLPQILQMRELLERGIGVHHGGLLPIVKELVEILFSKSL 721

Query: 419  VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
            VK LFATETFAMG+NMPAKTVV++  +K DG + R +  GEY QMSGRAGRRG D  G  
Sbjct: 722  VKVLFATETFAMGVNMPAKTVVYSNTRKHDGITFRDLLPGEYTQMSGRAGRRGLDKVGTV 781

Query: 479  IIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
            II   + + E  T++ M+LG P+ L S FRL+Y  ILNL+   +  F  E +IK SF +F
Sbjct: 782  IITYWKDIPEQATIESMLLGTPSRLNSQFRLTYNMILNLLRVPD--FKVEDMIKRSFSEF 839

Query: 538  QYEKALPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKLKLDIAQLEKKLMSEITRPE 593
              ++ +PDI K++SKL E+  SL       GE ++  Y+ L      + +++   I    
Sbjct: 840  SSQQEIPDIEKQISKLTEQYKSLGEIECILGEPDIENYYSLFSQSKNINERIQKTILNLP 899

Query: 594  RVLYYLGSGRLIKVREGG----TDWGWGVVVN----VVKKPSAG-------VGTLPSRGG 638
               ++   GR++ +          +  GV++     ++K+ +         + +L S   
Sbjct: 900  NSNHF-SPGRVLVLSNDDEMKYNSYTIGVIIQCNTEIIKQYTNNQVNRTFKIFSLKSSSN 958

Query: 639  GYIVPVQLPLISTLSKIRL----SVPPDLRPLDARQSILLAVQELESR---------FPQ 685
                  Q+  IS  S I+      +  D++ +++   I  A   LE +          P 
Sbjct: 959  NAFEGHQI-TISNGSDIKKVCDEKIKVDIKLIESADPI--ATNSLEQQLQRIIEEYPLPL 1015

Query: 686  GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC--FQRKAEVNHE 743
            G   ++P+  +K++D   V     +E++E  +   P +K       +C       E+  +
Sbjct: 1016 GPKAIDPIHQLKLKDVNFVTTYEHLEKIEKLI---PQSKCH-----KCPRLAEHYELTEK 1067

Query: 744  IQQLKSKMRDSQIQKFRDELK------NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
              QL+  +RD +     + LK       R  +LK+LG+ID D  V LKGR +  I+T +E
Sbjct: 1068 KHQLQEAIRDYKYTASDENLKLMPQFNIRLDILKELGYIDQDNSVTLKGRVSREINTCEE 1127

Query: 798  LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
            L+ TEL+F   F  L+  +V ++ SC I  +K + +  L   L +  ++L E A K  ++
Sbjct: 1128 LVPTELIFENAFISLEPSEVVSVLSCLIFQEKDALEPILTPRLDEARKKLIEIATKTYQV 1187

Query: 858  QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
            +++  L+V+ +E +E+T++  LM V+Y W++G  F ++ ++T++ EGSI+R+  R+ E  
Sbjct: 1188 ESKNGLDVSPEEKLETTLKFGLMQVVYEWARGTPFNDICKLTNVLEGSIVRAITRIGETC 1247

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             ++R AA+ +G+  L +K   A + ++R I++++SLY+
Sbjct: 1248 QEVRNAARVIGDTKLLQKMEEAIKLIKRDIVYTSSLYV 1285


>gi|123439993|ref|XP_001310762.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
 gi|121892545|gb|EAX97832.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
          Length = 965

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 355/930 (38%), Positives = 537/930 (57%), Gaps = 72/930 (7%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FE D FQ+ ++AC+   ESVLVSAHTSAGKT +A+YAI  A ++  RV+YTSP+KALS
Sbjct: 54  YDFEFDEFQKCAIACVHNKESVLVSAHTSAGKTVIAKYAIVSALQNNSRVVYTSPIKALS 113

Query: 133 NQKYRELHQEFKD------VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           NQKY+EL  EF+       VGL+TGDVT++P+AS LVMTTEILR ML+    +++E++WV
Sbjct: 114 NQKYKELADEFEPRFGKGCVGLLTGDVTINPSASVLVMTTEILRMMLFMQDTLIRELSWV 173

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           ++DE+HYMKDR RGVVWEESII LP  ++ VFLSAT+ NA +F+EWI   HKQ CHVVYT
Sbjct: 174 VYDEVHYMKDRSRGVVWEESIIMLPDDVRFVFLSATIPNAREFSEWIATTHKQVCHVVYT 233

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM- 305
           + RP PL  Y+ P+G    Y+V + + +  +  F  L    +K   G  +  G    +  
Sbjct: 234 ERRPVPLHFYLSPLGQPKPYMVRNAEGEINDQQFA-LACASVKSNAGASKTFGSVQVKSS 292

Query: 306 ----AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
               +K    + G    KI++ +      P+IVF FSR+EC+    S+ +  F   EEK 
Sbjct: 293 ETTKSKVSKKALGQHTCKIIENLYNSNLYPMIVFVFSRKECDNIHESLGERTFLKPEEKY 352

Query: 362 TVEQVFQNAVDCL-NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
            V +VFQNA+  + NE DRNLP I+ M  L++RGI VHH GL+P++KE+VELLFQ  L+K
Sbjct: 353 YVTEVFQNAIQRIPNEADRNLPQIKHMKRLVERGIGVHHGGLMPILKEVVELLFQYHLIK 412

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            LFATETF+MGLNMPAKTVVF +++K+DG+  R I + E+IQM+GRAGRR KD  G  +I
Sbjct: 413 VLFATETFSMGLNMPAKTVVFNSLQKFDGNELRTIHTSEFIQMAGRAGRRNKDQFGAVVI 472

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
               +     LK ++     PL S FR++Y  ILN ++ A G    + ++++SFHQFQ E
Sbjct: 473 NYGGEPSPADLKALMTSGAQPLNSEFRVTYNMILNSLTSANGN--PKRIMRSSFHQFQME 530

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQ----LEKKLMSEITRPERVL 596
           + +P++ +++++++ +A +++ +     AE  KLK+++ +    L+ K+   I   E   
Sbjct: 531 RQIPELKRRLNEIKTQADAIELTD----AEKTKLKVEMQEKLRLLQNKMKKMIFDEENAK 586

Query: 597 YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRG-----GGYIVPVQLPLIS- 650
            +L  G+++K+RE    WG+ VVV     P  GV T+ S       G  + P +    S 
Sbjct: 587 NFLIPGKIVKLRE----WGYCVVVT---PPHKGVLTVISNAVTTIEGNVVPPSKSKAKSQ 639

Query: 651 -TLSKIRLSVPPDLRPLDARQSILLAVQELESRF-PQGLPKLNPVKDMKIEDPEVVDLVN 708
            TL  + L+   ++ P      + ++   L ++   Q +  ++ +    I +    DL N
Sbjct: 640 PTLISVGLTEFEEVSP----HIVTVSFDSLNNKMVSQIMKSVDNMAKSGISNVNHRDLCN 695

Query: 709 Q--------IEELEHKLF--AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
           +         EE  ++L    H L    DE  +  F  K  +  EI+ L  K+ D ++  
Sbjct: 696 EKFREEYLKSEEEYNRLLDSVHALG-DVDEKTLHDFITKRNLEDEIETLNKKISDMELLA 754

Query: 759 FRDELKNRSRVLKKLGHI------DADGVV-QLKGRAACLIDTGDELLVTELMFNGTFN- 810
            + +L    ++L +LG +      +  GVV  LKGR A  +++ DE+++TEL+ NG    
Sbjct: 755 NQGDLDAMMQLLLQLGFVEEVETMEGKGVVITLKGRVAASVNSCDEIVITELLVNGWIKP 814

Query: 811 DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ---LQESARKIAEIQNECKLEVNV 867
           +     + ++ SCFI     SE+ N + +L     Q   LQ +A KIA++   C + ++ 
Sbjct: 815 EYSASMICSILSCFI-----SEEKNDKPDLEGYEDQWKTLQNTASKIADMSLACGVPLD- 868

Query: 868 DEYVESTVRPFLMDVIYCWSKGATFAEVIQ-MTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
            E   S   P  + ++  W+ GA F  +++     +EGSI+R+ +RLDE L Q+  AA  
Sbjct: 869 KEIFMSQFNPSFVKLVESWAMGADFQSIMKDYPTYYEGSIVRTIKRLDELLGQVSKAADI 928

Query: 927 VGEVNLEKKFAAASESL-RRGIMFSNSLYL 955
            G  +L +     +  L  RGI+F+ SLYL
Sbjct: 929 FGNKSLAEYIEKEARPLINRGIVFTKSLYL 958


>gi|156100705|ref|XP_001616046.1| ATP dependent RNA helicase [Plasmodium vivax Sal-1]
 gi|148804920|gb|EDL46319.1| ATP dependent RNA helicase, putative [Plasmodium vivax]
          Length = 1387

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 271/511 (53%), Positives = 371/511 (72%), Gaps = 20/511 (3%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+H+   P  Y       +H   +  +     A+TY FELD FQ+ S+ CLERNESVLV
Sbjct: 234 NCIHKCIRPRSY-------VHNKLSETL---TPARTYKFELDTFQKKSIECLERNESVLV 283

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLS 156
           SAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD++++
Sbjct: 284 SAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISIN 343

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            +AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++ 
Sbjct: 344 TDASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVRF 403

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F+
Sbjct: 404 IFLSATIPNGIQFAEWVSSIKSQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKDFK 463

Query: 277 EDNFVKLQDTFLKQKIG----GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
           ++NF+K  +  +K+K+     G+ +NG  + +  + G      DI KIV+M   R + P+
Sbjct: 464 KNNFIKAVNA-IKEKMNLSEDGQHQNG--NNKHQRRGK-KNIHDIEKIVQMCHSRNYTPL 519

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           I+F+FS++ECE +A SM K+D     EK+ ++++++NA+  L ++DR LP ++ +LPLL 
Sbjct: 520 IIFAFSKKECEINATSMHKVDLTDDTEKEVIKELYENAIQILADDDRALPQVQFILPLLL 579

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RGI +HH GLLP+IKE++E++FQE L+K LF+TETF+MG+NMPAKTVVFT++ K+DG   
Sbjct: 580 RGIGIHHGGLLPIIKEIIEIMFQESLLKVLFSTETFSMGINMPAKTVVFTSLTKFDGVEK 639

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
           R I SGEYIQM+GRAGRRG DDRGI IIM+D  +     + + +G+   LVS F L Y  
Sbjct: 640 RLITSGEYIQMAGRAGRRGLDDRGIVIIMLDTPLHWREAEKLFVGEANRLVSQFHLGYNM 699

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           ILNL+ R EG    E +I+ SF Q+Q +K L
Sbjct: 700 ILNLL-RIEG-IRPEFMIERSFIQYQMKKNL 728



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 106/176 (60%), Gaps = 2/176 (1%)

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME- 839
            VV +KG+ A  I + DEL++ EL F+  F+  ++  + A  SCF+  + S+++I +    
Sbjct: 1213 VVTMKGQIASAILSVDELVIAELFFSNFFSKYNYDYICAFLSCFVYDESSNKEIAISDPV 1272

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            L +  QQ+ ++A  ++   NEC + +N+ +Y++   +  +M ++  W +G +F E++  +
Sbjct: 1273 LVEGYQQIIKTATHVSNKMNECGMNINLKDYLDK-FKSAIMPIVLQWVRGYSFMEILTDS 1331

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             I+EGSIIR+ RRLDE L Q+  A + +   ++      A++ LRRGI FS SLYL
Sbjct: 1332 QIYEGSIIRTLRRLDELLRQMICAFRGINNDSMCDILTEATKKLRRGIPFSPSLYL 1387


>gi|384495409|gb|EIE85900.1| hypothetical protein RO3G_10610 [Rhizopus delemar RA 99-880]
          Length = 1100

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 351/934 (37%), Positives = 523/934 (55%), Gaps = 67/934 (7%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA  + FELD FQ+ +V  LE  +SV ++AHTSAGKT VA+YAIA+A +   + IYTSP
Sbjct: 188  EMAMQFPFELDTFQKHAVYHLEMGDSVFIAAHTSAGKTVVADYAIALATKHMTKAIYTSP 247

Query: 128  LKALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            +KALSNQK+R+    F  DVG++TGDV + P ASCLVMTTEILR MLYRG++++++V +V
Sbjct: 248  IKALSNQKFRDFKHTFGDDVGILTGDVQIKPEASCLVMTTEILRSMLYRGADLIRDVEFV 307

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T
Sbjct: 308  IFDEVHYVNDLERGVVWEEVIIMLPAHVNIILLSATVPNTREFAGWVGRTKKKDIYVIST 367

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKE-QFREDNFVKLQDTFLKQKIGGRRENG------ 299
              RP PL+HY++      +Y +V   E +     + K QD   K+K    + +G      
Sbjct: 368  LKRPVPLEHYLY--ANKDIYKIVGANELKLSTAGYKKAQDAMTKRKEQIEKSSGNNNVRG 425

Query: 300  ------------KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
                        K  GR       +  +    ++ M+  +   PV++F+FS++ CE++A 
Sbjct: 426  GRGGRGGARGGGKPMGRSYHAAMQTDRNLFVHLIGMLKTKSLLPVVIFTFSKKRCEEYAS 485

Query: 348  SMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             +SK D  T  EK  +    + ++  L   D+ LP I  M  LL RGIAVHHSGLLP+IK
Sbjct: 486  GLSKTDLCTSLEKSEIHVFIERSLVRLRGSDKFLPQILRMRDLLSRGIAVHHSGLLPIIK 545

Query: 408  ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
            E+VE+LF  GLVK LFATETFAMG+NMPA+ VVF+ ++K DG S R +  GEY QMSGRA
Sbjct: 546  EIVEILFARGLVKVLFATETFAMGVNMPARCVVFSGIRKHDGRSFRDLLPGEYTQMSGRA 605

Query: 468  GRRGKDDRGICIIMV--DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
            GRRG D  G+ II    +E  E +TL  M+LGKP  L S FRL+Y  ILNL+ R E    
Sbjct: 606  GRRGLDSTGVVIIATGGEEPPEASTLSTMILGKPTKLESQFRLTYNMILNLL-RVEA-LK 663

Query: 526  AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQL 581
             E +IK SF +   +K LPD  + V + E++  +L     A  E ++ +++ +  ++  L
Sbjct: 664  VEEMIKRSFSENSTQKLLPDTKRLVDENEQKRNALRQLDCAICEPDIEKFYDICGEVVYL 723

Query: 582  EKKLMSE-ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-PSAGVGTLPSRGGG 639
             + +M++ +T        L  GRL+ +             NV +  P+  +  LPS   G
Sbjct: 724  NRTMMTQFVTAMPAGNRALCPGRLVIINS-----------NVYRNAPAIILKPLPSNASG 772

Query: 640  YIVPVQLPLISTLSKIRLSVPPDLR---PLDARQSILLAVQELESR---FPQGLPKLNPV 693
            +     L L+     + +S  P+L    PL      + A +E   +      G P    +
Sbjct: 773  HRSFYCLVLLD--KDLDVSDTPNLDETPPLPITD--ICAPEEGNGKTEIITVGAPDFLFI 828

Query: 694  KDMKIEDPEVVDLVNQIEELEHKLFAHP------------LNKSQDENQIRCFQRKAEVN 741
              + ++      + ++   LE    A              L + +  +Q         ++
Sbjct: 829  TKLALKIDADTIMTSEQNNLERVKSAQELQSFGVDARKGGLTEYEWASQYALIHAHKRLS 888

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
             +I+ LK  + D  ++   D    R  +L +L +ID  G VQLKGR AC I++ DELL+T
Sbjct: 889  SQIELLKMTISDQNLELLPD-YHQRIEILHRLNYIDDQGTVQLKGRVACEINSADELLLT 947

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+ +  F D +  ++ A+ SCF+  ++S  +  L  +LAK    +   A+K+AE+Q EC
Sbjct: 948  ELVLDNVFADFEPAELVAILSCFVFQERSESEPRLTPKLAKGKGIVLSYAKKLAELQAEC 1007

Query: 862  KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
             L ++V++YV S  R  L++V+Y W+KG  F  +  +TD+ EGSI+R   RLDE   ++ 
Sbjct: 1008 GLSISVEDYVGS-FRFGLVEVVYEWAKGLPFKHITDLTDVLEGSIVRCISRLDETCREVM 1066

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             AA+ VG+ +L KK   A + ++R I+F+ SLY 
Sbjct: 1067 GAARMVGDTSLYKKMEQAEQDIKRDIVFAASLYF 1100


>gi|126309591|ref|XP_001369051.1| PREDICTED: helicase SKI2W [Monodelphis domestica]
          Length = 1249

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 349/948 (36%), Positives = 523/948 (55%), Gaps = 76/948 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            + FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 310  WPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 369

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 370  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 429

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 430  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRHLYVISTAARPVP 489

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+H++F    P     L+L++D +  F    +    +   K++     +   A   M +G
Sbjct: 490  LEHFLFTGNSPKTQGELFLLLDSRGIFHTKGYYAAVEA-KKERTSKHAQTFGAKQPMHQG 548

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G G        ++  +  R   PV+VF+FSR  C++ A  +S LD  T  EK  +    Q
Sbjct: 549  GPGQDRGIYLSLLASLRSRAQLPVVVFTFSRGRCDEQASGLSSLDLTTSSEKSEIHLFLQ 608

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 609  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 668

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 669  AMGVNMPARTVVFDSMRKHDGATFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 728

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M+LGKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 729  MADLHRMMLGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 786

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            + L ++ K++  LEE     D SG+  ++ EY+    ++ +    +   I      L  L
Sbjct: 787  QTLAELTKRLGNLEEP----DTSGQLVDLPEYYSWGEELTETRGLIQRRIMESVNGLKSL 842

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGV-------------GTLPSRGGGYIVPVQL 646
              GR++ V+        GV++ V    +  V             G LP+    + VP   
Sbjct: 843  SVGRVVVVKNQEHKNALGVILQVSSDTTNRVFTTLILCEKQPLEGPLPASSSSHDVPYPE 902

Query: 647  PLIS-------------------------TLSKIRLSVPPDLRPLDARQ----------- 670
             L+                          T   +R++    L     RQ           
Sbjct: 903  DLVGHKLFLPEGPCDHTVAKLQPGDITAITTKMLRVNGERILEDFSKRQQPRFKKDPPSP 962

Query: 671  SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQE   L    P G P L+PV D+++++  VV+   +  +LE  +  A  ++  +
Sbjct: 963  AVTSAVQEMLRLAQAHPAGPPALDPVNDLQLKEVSVVEGGLRARKLEELIRGAQCVHSPR 1022

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    + +A++  E+ +L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1023 FPAQYLRLRERAQIQKEMDRLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDGAGTVKLAG 1081

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1082 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSSGDPGDQLPSTLKQGIER 1140

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            +++ AR+I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1141 VKDVARRIGEVQVSCGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1199

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K  AA+  LRR I+F+ SLY
Sbjct: 1200 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMEAAATMLRRDIVFAASLY 1247


>gi|332245658|ref|XP_003271973.1| PREDICTED: helicase SKI2W [Nomascus leucogenys]
          Length = 1218

 Score =  567 bits (1460), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 347/925 (37%), Positives = 526/925 (56%), Gaps = 58/925 (6%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRREIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT-------LPSRGGGYIV----PVQLP 647
            L +GR++ V+        GV++ V    ++           LP     + V    P  + 
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRXXXXXXXXLFLPEGPCDHTVLKLHPGDMA 898

Query: 648  LISTLSKIRLSVPPDLRPLDARQ-----------SILLAVQE---LESRFPQGLPKLNPV 693
             I+T   +R++    L     RQ           ++  AVQE   L    P G P L+PV
Sbjct: 899  AITT-KVLRVNGEKILEDFSKRQQPKFKKDPPLAAVTTAVQELLRLAQAHPAGPPTLDPV 957

Query: 694  KDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR 752
             D++++D  VV+   +  +LE  +  A  ++  +   Q    + + ++  E+++L+  + 
Sbjct: 958  NDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLLS 1017

Query: 753  DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
            D  +     E   R  VL+ LG++D  G V+L GR AC + +  ELL+TELMF+   + L
Sbjct: 1018 DQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTL 1075

Query: 813  DHHQVAALAS---CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 869
               ++AAL S   C  P D   +  N    L + +++++  A++I E+Q  C L   V+E
Sbjct: 1076 RPEEIAALLSGLVCQSPGDAGDQLPN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEE 1132

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            +V   +   L++V+Y W++G  F+E+  ++   EG ++R  +RL E    LR AA+ VGE
Sbjct: 1133 FV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGE 1191

Query: 930  VNLEKKFAAASESLRRGIMFSNSLY 954
              L  K   A+  LRR I+F+ SLY
Sbjct: 1192 PVLGAKMETAATLLRRDIVFAASLY 1216


>gi|395533841|ref|XP_003768961.1| PREDICTED: helicase SKI2W [Sarcophilus harrisii]
          Length = 1249

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 352/951 (37%), Positives = 524/951 (55%), Gaps = 82/951 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            + FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 310  WPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 369

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 370  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 429

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 430  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRHLYVISTAARPVP 489

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+H++F    P     L+L++D +  F    +    +   K++     +   A   M +G
Sbjct: 490  LEHFLFTGNSPKTQGELFLLLDSRGVFHTKGYYAAVEA-KKERTSKHAQTFGAKQPMHQG 548

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G G        ++  +  R   PV+VF+FSR  C++ A  +S LD  T  EK  +    Q
Sbjct: 549  GPGQDRGIYLSLLASLRSRAQLPVVVFTFSRGRCDEQASGLSSLDLTTSSEKSEIHLFLQ 608

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 609  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 668

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 669  AMGVNMPARTVVFDSMRKHDGATFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 728

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M+LGKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 729  MADLHRMMLGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 786

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            + L ++ K++  LEE     D SG+ A++ EY+    ++ +    +   I      L  L
Sbjct: 787  QTLAELTKRLGDLEEP----DTSGQLADLPEYYSWGEELTETRGLIQRRIMESVNGLKSL 842

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGV-------------GTLPSRGGGYIVPV-- 644
              GR++ V+        GV++ V    +  V             G LP       VP   
Sbjct: 843  SVGRVVVVKNQEHRNALGVILQVSSDTTNRVFTTLILCEKQPPEGPLPGSSRSLDVPYPD 902

Query: 645  ----------QLPLISTLSKIRLSVPPD----------------LRPLDARQS------- 671
                      + P   T++K++   P D                L     RQ        
Sbjct: 903  DLVGHKLFLPEGPCDHTVAKLQ---PSDIIAITTKMLRVNGERILEDFSKRQQPRFKKDP 959

Query: 672  ----ILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLN 723
                +  AVQE   L    P G P L+PV D+++++  VV+   +  +LE  +  A  ++
Sbjct: 960  PSPLVTSAVQEMLRLAQAHPAGPPTLDPVNDLQLKEVLVVEGGLRARKLEELIRGAQCVH 1019

Query: 724  KSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
              +   Q    Q + ++  E+++L+  + D  +     E   R  +L+ LG++D  G V+
Sbjct: 1020 SPRFPAQYLRLQERVQIQKEMERLRFLLSDQSLLL-LPEYHQRVEILRTLGYVDGAGTVK 1078

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + 
Sbjct: 1079 LAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQG 1137

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            ++++++ AR+I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   E
Sbjct: 1138 IERVKDVARRIGEVQVSCGLNQTVEEFV-GELHFGLVEVVYEWARGMPFSELAGLSGTPE 1196

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G I+R  +RL E    LR AA+ VGE  L  K  AA+  LRR I+F+ SLY
Sbjct: 1197 GLIVRCIQRLAEMCRSLRGAARLVGEPVLGAKMEAAATMLRRDIVFAASLY 1247


>gi|149027987|gb|EDL83438.1| superkiller viralicidic activity 2-like, isoform CRA_c [Rattus
            norvegicus]
          Length = 1083

 Score =  565 bits (1457), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 345/950 (36%), Positives = 523/950 (55%), Gaps = 79/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 143  WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 202

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 203  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 262

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 263  YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 322

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 323  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 381

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 382  GPAQDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 441

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 442  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 501

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 502  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 561

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 562  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 619

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL D+ K++  LEE     D +G+ A++ EY+    ++ +    +   I      L  L
Sbjct: 620  QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSL 675

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------PS-----RGGGYIVPVQLPL 648
              GR++ V+        GV++ V    ++ V T       P+     R  G   P  +P 
Sbjct: 676  SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKPAVSENPRDKGPATP-DVPH 734

Query: 649  ISTLSKIRLSVP----------------------------------------PDLRPLDA 668
               L   +L +P                                        P  R    
Sbjct: 735  PDDLVGFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPP 794

Query: 669  RQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L   +P G P L+P+ D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 795  LAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHS 854

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 855  PRFPAQYVKLQERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 913

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 914  AGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGV 972

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 973  ERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1031

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1032 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1081


>gi|47087109|ref|NP_998724.1| superkiller viralicidic activity 2-like (S. cerevisiae ) [Rattus
            norvegicus]
 gi|46237592|emb|CAE83970.1| superkiller viralicidic activity 2-like (S. cerevisiae) [Rattus
            norvegicus]
          Length = 1241

 Score =  564 bits (1454), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 345/950 (36%), Positives = 523/950 (55%), Gaps = 79/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 301  WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 360

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 361  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 420

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 421  YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 480

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 481  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 539

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 540  GPAQDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 599

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 600  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 659

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 660  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 719

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 720  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 777

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL D+ K++  LEE     D +G+ A++ EY+    ++ +    +   I      L  L
Sbjct: 778  QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSL 833

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------PS-----RGGGYIVPVQLPL 648
              GR++ V+        GV++ V    ++ V T       P+     R  G   P  +P 
Sbjct: 834  SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKPAVSENPRDKGPATP-DVPH 892

Query: 649  ISTLSKIRLSVP----------------------------------------PDLRPLDA 668
               L   +L +P                                        P  R    
Sbjct: 893  PDDLVGFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPP 952

Query: 669  RQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L   +P G P L+P+ D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 953  LAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHS 1012

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1013 PRFPAQYVKLQERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1071

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 1072 AGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGV 1130

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 1131 ERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1189

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1190 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1239


>gi|149027986|gb|EDL83437.1| superkiller viralicidic activity 2-like, isoform CRA_b [Rattus
            norvegicus]
          Length = 1236

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 345/950 (36%), Positives = 523/950 (55%), Gaps = 79/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 296  WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 355

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 356  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 415

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 416  YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 475

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 476  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 534

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 535  GPAQDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 594

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 595  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 654

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 655  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 714

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 715  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 772

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL D+ K++  LEE     D +G+ A++ EY+    ++ +    +   I      L  L
Sbjct: 773  QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSL 828

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------PS-----RGGGYIVPVQLPL 648
              GR++ V+        GV++ V    ++ V T       P+     R  G   P  +P 
Sbjct: 829  SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKPAVSENPRDKGPATP-DVPH 887

Query: 649  ISTLSKIRLSVP----------------------------------------PDLRPLDA 668
               L   +L +P                                        P  R    
Sbjct: 888  PDDLVGFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPP 947

Query: 669  RQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L   +P G P L+P+ D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 948  LAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHS 1007

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1008 PRFPAQYVKLQERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1066

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 1067 AGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGV 1125

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 1126 ERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1184

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1185 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1234


>gi|148694811|gb|EDL26758.1| mCG15924, isoform CRA_g [Mus musculus]
          Length = 1086

 Score =  563 bits (1452), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 346/950 (36%), Positives = 526/950 (55%), Gaps = 79/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 146  WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 205

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 206  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 265

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 266  YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 325

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 326  LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 384

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 385  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 444

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 445  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 504

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 505  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 564

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 565  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 622

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 623  QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 678

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLPL 648
              GR++ V+        GV++ V    ++ V T              R  G   P  +P 
Sbjct: 679  SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKPVVSDNPRDKGPATP-DVPH 737

Query: 649  ISTLSKIRLSVP--------PDLRPLDA---------------------RQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 738  PDDLIGFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPP 797

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L   +P G P L+P+ D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 798  LAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHS 857

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 858  PRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 916

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 917  AGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGV 975

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 976  ERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1034

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1035 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1084


>gi|380788617|gb|AFE66184.1| helicase SKI2W [Macaca mulatta]
          Length = 1246

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 351/953 (36%), Positives = 529/953 (55%), Gaps = 86/953 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        Y
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAY 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D SG+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DVSGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 897

Query: 649  ISTLSKIRLSVPP--------DLRPLD---------------------ARQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 898  PDDLVGFKLFLPEGPCEHTVVKLQPADMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPP 957

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 958  LAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 1017

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1018 PRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1076

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELA 841
             GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L 
Sbjct: 1077 AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLK 1132

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++  
Sbjct: 1133 QGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGT 1191

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1192 PEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|403307800|ref|XP_003944371.1| PREDICTED: helicase SKI2W isoform 2 [Saimiri boliviensis boliviensis]
          Length = 1082

 Score =  561 bits (1447), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 349/952 (36%), Positives = 527/952 (55%), Gaps = 84/952 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 143  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 202

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 203  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 262

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 263  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 322

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 323  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 381

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 382  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 441

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 442  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 501

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 502  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 561

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 562  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 619

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  L
Sbjct: 620  QALAELTKRLGALEEP----DVTGQLVDLPEYYSWGEELTETQHMIQRHIMESVNGLKSL 675

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             +  G   P  +P  
Sbjct: 676  SAGRVVIVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKSLSKDQQDSGPATP-DVPYP 734

Query: 650  STLSKIRLSVPP--------DLRPLD---------------------ARQ---------- 670
              L   +L +P          L+P D                      RQ          
Sbjct: 735  DDLVGFKLFLPEGPCDHTVIKLQPRDIAAITTKVLRVNGEKILEDFSKRQQPKFKKDPPL 794

Query: 671  -SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKS 725
             ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++  
Sbjct: 795  AAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSP 854

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L 
Sbjct: 855  RFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLA 913

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELAK 842
            GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L +
Sbjct: 914  GRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLKQ 969

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
             +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   
Sbjct: 970  GIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTP 1028

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            EG I+R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1029 EGLIVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1080


>gi|384940060|gb|AFI33635.1| helicase SKI2W [Macaca mulatta]
          Length = 1246

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 350/953 (36%), Positives = 529/953 (55%), Gaps = 86/953 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        Y
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAY 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DVTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 897

Query: 649  ISTLSKIRLSVPP--------DLRPLD---------------------ARQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 898  PDDLVGFKLFLPEGPCEHTVVKLQPADMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPP 957

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 958  LAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 1017

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1018 PRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1076

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELA 841
             GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L 
Sbjct: 1077 AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLK 1132

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++  
Sbjct: 1133 QGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGT 1191

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1192 PEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|320169748|gb|EFW46647.1| RNA helicase [Capsaspora owczarzaki ATCC 30864]
          Length = 1332

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 347/983 (35%), Positives = 535/983 (54%), Gaps = 110/983 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + F+LD FQ+ ++  LE++ESV ++AHTSAGKT +AEYAIA+A +   + IYTSP
Sbjct: 362  DMAYRWPFKLDTFQQQAILLLEKHESVFIAAHTSAGKTVIAEYAIALAAKHLTKAIYTSP 421

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F DVGL+TGDV + P ASC+VMTTEILR MLYRG++++++V WVI
Sbjct: 422  IKALSNQKFRDFRNTFHDVGLLTGDVQIRPEASCVVMTTEILRSMLYRGADMIRDVEWVI 481

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D +RGVVWEE II LPP + ++ LSAT+ N  +FA W+    ++  HV+ T 
Sbjct: 482  FDEVHYVNDVDRGVVWEEVIIMLPPHVNIIMLSATVPNTMEFAGWVGRTKRKRIHVISTL 541

Query: 248  FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
             RP PL+H+++  G S      L+ +VD  + F +  + +  +T  ++K   +       
Sbjct: 542  KRPVPLEHFLY-TGNSTKTSNELFKIVDANKNFLQAGYKQAVETIAQRKAQAQDNQQGGG 600

Query: 303  GRMA-----------------------------KGGSGSGGSDIFKIVKMIMERKFQPVI 333
                                             +G      +    +++M+ ++   P++
Sbjct: 601  SGGRGGGARGGAAHRGGGGGRGGGGGHFGGNSYRGNPQQDRNIWMSLIEMLQKKSLLPMV 660

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
             F+FS++ CE +A  +  LD  T +EK  +    +N+V  L   DRNLP +  M  +L+R
Sbjct: 661  AFTFSKKRCESNADGILTLDLTTGDEKSAIHVFIENSVSRLRGNDRNLPQVLRMRDMLRR 720

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS-H 452
            G+AVHH GLLP+IKE+VELLFQ GLVK L+ATETFAMG+NMP +TVVF + +K DG +  
Sbjct: 721  GVAVHHGGLLPIIKEMVELLFQRGLVKVLYATETFAMGVNMPTRTVVFDSTRKPDGQAGF 780

Query: 453  RYIGSGEYIQMSGRAGRRGKDDRGICIIMV--DEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
            R +  GEY+QM+GRAGRRG DD G  I++V  DE  +   L +M+LGK   L S FRL+Y
Sbjct: 781  RDLLPGEYVQMAGRAGRRGLDDTGTVILLVKGDEVPDAGGLINMLLGKATTLESRFRLTY 840

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE---EEAASLDASG--E 565
              ILNL+ R E +   E +IK SF +F  ++   +  K++++ E   ++  SLD      
Sbjct: 841  NMILNLL-RVE-EIRVEDMIKRSFSEFHVQRDTTEQKKRLAEGEKTLKQLPSLDNCTFCL 898

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY--LGSGRLIKVREGGTDWGWGVVV--N 621
            A++  ++K   +  Q  ++    +     +L +  LG GR++ V         GVV+  N
Sbjct: 899  ADIEPFYKASAEFLQYAREFSISVA---SLLGHKILGPGRVVVVNNATHRNALGVVLKFN 955

Query: 622  VVKKPSAGVGT---------LPSRGGGYIVP-----VQLPLIS----------------- 650
                 S+ +G          + S   G+I         LP++S                 
Sbjct: 956  STTSTSSSLGARAQKALTVLVMSNPPGFIASDALLNAPLPVLSLFTPDGALDHDIVQIDA 1015

Query: 651  ----TLSKIRLSVPP----DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
                T++  RL V      + R + A    L  +  L    P  L  ++PVKDMK++D +
Sbjct: 1016 GDIITITTTRLKVESISHLEKRDVRATAPTLEELARLAKAQPATLTTMHPVKDMKLQDLD 1075

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE--VNHEIQQLKSKMRD------S 754
            VVD   + + L+           Q    I C Q +    + HE Q+L  +++        
Sbjct: 1076 VVDKFARRQNLDATF--------QQYKCIHCPQLRQHYAIIHERQRLHDQVQSLKHLLSD 1127

Query: 755  QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE---LLVTELMFNGTFND 811
                   E + R  VL+++G+ID + +VQ+KGR AC I+T D+   L+VTEL+F      
Sbjct: 1128 DSLALLPEYQQRLDVLQRMGYIDENKLVQMKGRVACEINTVDDGGALIVTELIFENVLAS 1187

Query: 812  LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
            L   ++ AL S  +  +KS  +  L   + K   +L+  A K+AE+QN C    +V +++
Sbjct: 1188 LSPAEIVALLSSLVFQEKSQSEPKLTEPMEKAKAELERVATKVAEMQNACGFSTSVPDFL 1247

Query: 872  ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
             ST    L++V+  W++G  F ++  +TDI EGSI+R   RL+E    +R AA+ +G+  
Sbjct: 1248 RSTFHFGLIEVVLEWARGMPFQQITDLTDILEGSIVRCITRLEETCRDVRNAARTIGDPL 1307

Query: 932  LEKKFAAASESLRRGIMFSNSLY 954
            L  K   A+  ++R I+F+ SLY
Sbjct: 1308 LMAKMDEAAGLIKRDIVFAASLY 1330


>gi|432881492|ref|XP_004073809.1| PREDICTED: helicase SKI2W-like isoform 1 [Oryzias latipes]
          Length = 1246

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 352/952 (36%), Positives = 527/952 (55%), Gaps = 76/952 (7%)

Query: 62   NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            NP +       + FELD FQ+ ++  LE ++SV V+AHTSAGKT VAEYAIA++ +   R
Sbjct: 310  NPAFK------WPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTR 363

Query: 122  VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
             IYTSP+KALSNQK+R+    FKDVGL+TGDV LSP ++CL+MTTEILR MLY GSEV++
Sbjct: 364  TIYTSPIKALSNQKFRDFKTTFKDVGLLTGDVQLSPESACLIMTTEILRSMLYNGSEVIR 423

Query: 182  EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            ++ WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  
Sbjct: 424  DLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKKHI 483

Query: 242  HVVYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
            +V+ T  RP PL+H+++  G S      ++L+VD    F    +    D   K++   + 
Sbjct: 484  YVISTMKRPVPLEHHLY-TGNSTKTQKEMFLLVDAAGNFLTKGYYAAVDA--KKERSSKH 540

Query: 297  ENGKASGRMAKGGSGSGGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
                 +   ++  + S    ++  ++  + +R+  PV+ F+FSR  C+ +A S+  +D  
Sbjct: 541  AQTFGAKNTSQNTTASQDRSVWLALLHFLSQRQQTPVVAFTFSRARCDDNARSLESMDLT 600

Query: 356  TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
            T  EK  +   FQ ++  L   DR LP I LM  LLKRG+AVHHSG+LP++KE++E+LF 
Sbjct: 601  TSVEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGVAVHHSGILPILKEVIEMLFS 660

Query: 416  EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
             GLVK LFATETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  
Sbjct: 661  RGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDAT 720

Query: 476  GICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  II+    + EM  L  M++GKP  L S FRL+Y  ILNL+ R E       ++K SF
Sbjct: 721  GTVIILCKAGVHEMADLHAMMMGKPTILQSQFRLTYTMILNLL-RVEA-LRVTDMMKRSF 778

Query: 535  HQFQYEKALPDIGKKVSKLEEEAAS---LDASGE-AEVAEYHKLKLDIAQLEKKLMSEIT 590
               +  +   +  K++S+L +  +S   LD  G+ +++  Y+    ++    + L   I 
Sbjct: 779  S--ESHRNAQEHEKRISQLRQTLSSLPPLDPEGQLSDLLPYYHTVAELRVTNESLQKAIV 836

Query: 591  RPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV---------------KKPSAGVGTLPS 635
                 L  L  GR++ V         GV++ V                K    G G  P 
Sbjct: 837  ESVNGLKALSVGRVLVVNNKQHLNALGVILQVSSDAVNRTFTALIICEKGNEEGKGE-PD 895

Query: 636  RGGGYIVPVQL-----PLISTLSKIRLS------------VP------------PDLRPL 666
                ++    L     P   T+ K++L             +P            P  R  
Sbjct: 896  AASPHLYNTALFIPEGPCSHTVQKLKLQDISAITVKTLKVIPDRIIDNYNKRQQPRFRHE 955

Query: 667  DARQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP-L 722
               Q+I  A QE   L    P GL  L+PV D++++  +VV+   ++  L+  L +   +
Sbjct: 956  PPGQAISTATQELLRLAEANPGGLATLDPVNDLQLKSVDVVEGSMRLRLLQDSLKSFTCI 1015

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            +      Q    + +  V  E+ +L   + D  +     E   R +VL+ L +ID+ G V
Sbjct: 1016 HSPTFAEQFARVKERMSVQEELDRLLFLVSDQSL-TLLPEYHQRIKVLQSLQYIDSGGAV 1074

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            QLKGR AC I + + LL   L  N   + L   + AAL SC +   K+  + +L   L +
Sbjct: 1075 QLKGRVACQISSHELLLTELLFEN-VMSPLAPEESAALLSCLVFTQKTQVEPHLTSTLKE 1133

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
             ++++   AR+I E+Q EC +    +E+V    +  L +V+YCW++G  FAE+  +TDI 
Sbjct: 1134 SIERVLSVARRIGELQRECGIPQTAEEFV-GQFKFGLTEVVYCWARGMPFAEIALLTDIQ 1192

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            EG+++R  +RLDE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1193 EGTVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLY 1244


>gi|348576448|ref|XP_003473999.1| PREDICTED: helicase SKI2W-like [Cavia porcellus]
          Length = 1243

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 345/949 (36%), Positives = 519/949 (54%), Gaps = 78/949 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            + FE D FQ+ ++  LE++ SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 304  WPFEPDVFQKQAILHLEQHNSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 363

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 364  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 423

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + +V LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 424  YINDAERGVVWEEVLIMLPDHVSIVLLSATVPNALEFADWIGRLKRRQIYVISTLTRPIP 483

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 484  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 542

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 543  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 602

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 603  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 662

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 663  AMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 722

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 723  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 780

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ KK+  LEE     D +G+ A++ +Y+    ++ +    +   I      L  L
Sbjct: 781  QALAELAKKLGSLEEP----DVAGQLADLPDYYSWGEELTETRSMIQRRIVESVNGLKSL 836

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT----------LPSRGGGYIVPVQLPLI 649
              GR++ V+        GV++ V    ++ V T          + S+  G   P  +P  
Sbjct: 837  SVGRVVVVKNQEHHHALGVILQVSSSSTSRVFTTLVLCDKPRSMDSQDRGPATP-DVPQP 895

Query: 650  STLSKIRLSVP----------------------------------------PDLRPLDAR 669
              L   +L +P                                        P  R     
Sbjct: 896  DDLVGFKLFLPEGPCDHTVAKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFRKEPPI 955

Query: 670  QSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKS 725
             ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++  
Sbjct: 956  PAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVAVVEGGLRARKLEELIQGAQCVHSP 1015

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L 
Sbjct: 1016 RFSAQYLKLRERMQIEKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLA 1074

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
            GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +Q
Sbjct: 1075 GRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVQ 1133

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            +++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG 
Sbjct: 1134 RVRAVAQRIGEVQVACGLSQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGL 1192

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1193 VVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1241


>gi|355762473|gb|EHH61971.1| Helicase SKI2W [Macaca fascicularis]
          Length = 1246

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 349/953 (36%), Positives = 529/953 (55%), Gaps = 86/953 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DVTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 897

Query: 649  ISTLSKIRLSVPP--------DLRPLD---------------------ARQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 898  PDDLVGFKLFLPEGPCEHTVVKLQPADMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPP 957

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 958  LAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 1017

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1018 PRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1076

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELA 841
             GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L 
Sbjct: 1077 AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLK 1132

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++  
Sbjct: 1133 QGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGT 1191

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1192 PEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|395832055|ref|XP_003789093.1| PREDICTED: helicase SKI2W [Otolemur garnettii]
          Length = 1246

 Score =  560 bits (1442), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 348/950 (36%), Positives = 522/950 (54%), Gaps = 80/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            + FE D FQ+ ++  LER+ SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WPFEPDVFQKQAILHLERHNSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A   M +G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPMHQG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQDRGVYLSLLASLRVRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ K++  LEE     D +G+  ++ EY+    ++      +   I      L  L
Sbjct: 784  QALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTATRHMIQQRIIESVNGLKSL 839

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLPL 648
             +GR++ V+        GV++ V    ++ V T            P   G  I  V  P 
Sbjct: 840  SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPMSQDPQDRGPAIPDVPHP- 898

Query: 649  ISTLSKIRLSVP--------PDLRPLDA---------------------RQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 899  -DDLVGFKLFLPEGPCDHTVTKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFKKDPP 957

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L   +P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 958  LAAVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 1017

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1018 PRFPAQYLRLRERIQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1076

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 1077 AGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGV 1135

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 1136 ERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1194

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1195 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|255558832|ref|XP_002520439.1| helicase, putative [Ricinus communis]
 gi|223540281|gb|EEF41852.1| helicase, putative [Ricinus communis]
          Length = 1335

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 345/1004 (34%), Positives = 545/1004 (54%), Gaps = 127/1004 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            + A  + FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 340  DTALDFPFELDTFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAP 399

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+   +F DVGL+TGDV+L P A+CL+MTTEILR MLYRG+++++++ WVI
Sbjct: 400  IKTISNQKYRDFCGKF-DVGLLTGDVSLRPEANCLIMTTEILRSMLYRGADIIRDIEWVI 458

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + +V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 459  FDEVHYVNDAERGVVWEEVIIMLPRHVNIVLLSATVPNTVEFADWIGRTKQKKIQVTGTT 518

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--------------- 292
             RP PL+H +F  G   LY +  E E F        +D   K+                 
Sbjct: 519  KRPVPLEHCLFYSG--ELYKIC-ENETFIPQGLRVAKDAHKKKNTSAVSSGSLALRDGAH 575

Query: 293  GGRRENGKASGRMAKGGSGSGGSD--------------------------IFKIVKMIME 326
            G +RE    + +    GS + GS                             ++V  + +
Sbjct: 576  GKKREYLNRNKQNKHFGSQNAGSFSGTSWGNQNNGNGQNNWGSRRSEASLWLQLVNKLSK 635

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PV++F FS+  C++ A  MS  D  +  EK  +      A   L   DRNLP I  
Sbjct: 636  KSLLPVVIFCFSKNRCDKSADGMSGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQIVR 695

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +  LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF  ++K
Sbjct: 696  VQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRK 755

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVST 505
            +DG   R +  GEY QM+GRAGRRG D  G  I+M  DE  +   LK +++G    L S 
Sbjct: 756  FDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCRDEIPDERDLKHVIVGSATRLESQ 815

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV-SKLEEEAASLDA-S 563
            FRL+Y  IL+L+ R E +   E ++K SF +F  +K LP+  + +  KL +   +++   
Sbjct: 816  FRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHTQKKLPETQQVLMRKLAQPTKAIECIK 873

Query: 564  GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGWGVVVN- 621
            GE ++ EY+ + L+  +   ++   + +      +L  GR++ V+ + G D   GVVV  
Sbjct: 874  GEPDIEEYYDMFLEAEEYSNQISEAVMQSSAAQQFLTPGRVVVVKSQSGQDHLLGVVVKG 933

Query: 622  ----------VVKKP------------SAGVGTLP---------------------SRGG 638
                      +V KP                G +P                     SR G
Sbjct: 934  PSTSMKQYIVLVLKPDLPSSTQISNLQDKKSGDIPKAYLLMPKSKRGEEEYFYSTASRKG 993

Query: 639  GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE---------------SRF 683
               V ++LP   T + +   V    R +D  + + +  ++L+               S+ 
Sbjct: 994  SGAVNIKLPYQGTAAGVNYEV----RGMDNTEFLCICARKLKIDQVGLLEDVSNTAFSKT 1049

Query: 684  PQGL-----------PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQI 731
             Q L           P L+P+ D+K++D  +V+   +   L  K+  +  +   + E  +
Sbjct: 1050 VQQLSELKSDGNKYPPALDPLTDLKMKDVNLVEAYKKWTSLLQKMARNKCHGCIKLEEHL 1109

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
               +   +   EI +L+ +M D  +Q+  D  + R  VLK++G IDAD VVQ+KGR AC 
Sbjct: 1110 NLAKEIKKHKDEIDKLRFQMSDEALQQMPD-FQGRIDVLKEIGCIDADLVVQIKGRVACE 1168

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            +++G+EL+ TE +F    +DL+  +  A+ S F+   +++ + +L  +L+K  ++L ++A
Sbjct: 1169 MNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRNTSEPSLTPKLSKAKKRLYDTA 1228

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
             ++ E+Q + KL++N +EY +  ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+  
Sbjct: 1229 IRLGELQVKNKLQINPEEYAQENLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIV 1288

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDE   + + AA  +G  +L KK  AAS +++R I+F+ SLY+
Sbjct: 1289 RLDETCREFKNAASIMGNSSLYKKMEAASNAIKRDIVFAASLYI 1332


>gi|355561557|gb|EHH18189.1| Helicase SKI2W [Macaca mulatta]
          Length = 1246

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 349/953 (36%), Positives = 529/953 (55%), Gaps = 86/953 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 897

Query: 649  ISTLSKIRLSVPP--------DLRPLD---------------------ARQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 898  PDDLVGFKLFLPEGPCEHTVVKLQPADMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPP 957

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 958  LAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 1017

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1018 PRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1076

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELA 841
             GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L 
Sbjct: 1077 AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLK 1132

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++  
Sbjct: 1133 QGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGT 1191

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1192 PEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|348519373|ref|XP_003447205.1| PREDICTED: helicase SKI2W isoform 1 [Oreochromis niloticus]
          Length = 1244

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 348/951 (36%), Positives = 529/951 (55%), Gaps = 74/951 (7%)

Query: 62   NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            NP +       + FELD FQ+ +V  LE ++SV V+AHTSAGKT VAEYAIA++ +   R
Sbjct: 308  NPAFK------WPFELDVFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTR 361

Query: 122  VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
             IYTSP+KALSNQK+R+    F DVGL+TGDV LSP +SCL+MTTEILR MLY GSEV++
Sbjct: 362  TIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVIR 421

Query: 182  EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            ++ WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  
Sbjct: 422  DLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRHI 481

Query: 242  HVVYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
            +V+ T  RP PL+HY++  G S      ++L++D    F    +    D   K++   + 
Sbjct: 482  YVISTLKRPVPLEHYLY-TGNSTKTQKEMFLLLDATGNFLTKGYYTAVDA--KKERTSKH 538

Query: 297  ENGKASGRMAKGGSGSGGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
                 +   ++  + S    ++  ++  + +R+  PV+ F+FSR  C+ +A S+  +D  
Sbjct: 539  AQSFGTKNTSQNTTASQDRSVWLTLLHFLSQRQQTPVVAFTFSRTRCDDNARSLDSMDLT 598

Query: 356  TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
            T  EK  +   FQ ++  L   DR LP I LM  LLKRGIAVHHSG+LP++KE++E+LF 
Sbjct: 599  TSIEKAEIHSFFQKSLTRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVIEMLFS 658

Query: 416  EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
             GLVK LFATETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  
Sbjct: 659  RGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDAT 718

Query: 476  GICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  II+    + EM  L  M+LGKP  L S FRL+Y  ILNL+ R E     + +++ SF
Sbjct: 719  GTVIILCKAGVHEMADLHAMMLGKPTLLQSQFRLTYTMILNLL-RVEALHVTD-MMRRSF 776

Query: 535  HQFQYEKALPDIGKKVSKLEEEAA---SLDASGE-AEVAEYHKLKLDIAQLEKKLMSEIT 590
             +   +    +  K++S+L++  +   S+D  G+ +++  Y+    ++ +  + +   I 
Sbjct: 777  SESHRDTQTHE--KRISQLKQMLSAMPSVDTEGQLSDLLPYYHTVTELKKTREAVQHAIL 834

Query: 591  RPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV---------------KKPSAGVGT--- 632
                 L  L  GR+I V         GV++ V                K    G G    
Sbjct: 835  ESVNGLKALSVGRVIVVNNKQHLNALGVILQVSSDSVNRTFTALIICEKGNEEGKGNDNA 894

Query: 633  -LPSRGGGYIVPVQLPLISTLSKIRLS------------VP------------PDLRPLD 667
             LP      +   + P   T+ K++L             +P            P  +   
Sbjct: 895  ALPHLHNMSLFIPEGPCSHTVQKLKLQDISAITVKTLKVIPERIIDNYNKRQQPRFKLDP 954

Query: 668  ARQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA-HPLN 723
              Q+I  A QE   L    P G+  L+PV D++++  +VV+   ++  L+  L   + ++
Sbjct: 955  PGQAISTATQELLRLAEANPSGIATLDPVNDLQLKSVDVVEANMRLRVLQESLRDFNCIH 1014

Query: 724  KSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
                  Q    + +  +  E+ QL   + D  +     E   R +VL+ L +ID  G VQ
Sbjct: 1015 SPMFAEQFARIKERMSLQEELDQLLFLVSDQSL-TLLPEYHQRIKVLQSLQYIDNGGAVQ 1073

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            LKGR AC I + + LL   L  N   + L   + AAL SC +    +  + ++   L + 
Sbjct: 1074 LKGRVACQISSHELLLTELLFEN-VLSPLAPEESAALLSCLVFTQNTQVEPHITNTLQEG 1132

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            +++++  A++I E+Q EC +    +E+V    +  L +V+YCW++G  FAE+ Q+TD+ E
Sbjct: 1133 IERVKSVAQRIGELQRECGIPQTAEEFV-GQFKFGLTEVVYCWARGMPFAEIAQLTDVQE 1191

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G+++R  +RLDE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1192 GTVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLY 1242


>gi|67968007|dbj|BAE00485.1| unnamed protein product [Macaca fascicularis]
          Length = 1146

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 349/953 (36%), Positives = 529/953 (55%), Gaps = 86/953 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 207  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 266

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 267  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 326

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 327  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 386

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 387  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 444

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 445  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 504

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 505  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 564

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 565  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 624

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 625  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 682

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 683  EQALAELTKRLGALEEP----DVTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 738

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 739  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 797

Query: 649  ISTLSKIRLSVPP--------DLRPLD---------------------ARQ--------- 670
               L   +L +P          L+P D                      RQ         
Sbjct: 798  PDDLVGFKLFLPEGPCEHTVVKLQPADMAAITTKVLRVNGEKILEDFSKRQQPKFKKDPP 857

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 858  LAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 917

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 918  PRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 976

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELA 841
             GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L 
Sbjct: 977  AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLK 1032

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++  
Sbjct: 1033 QGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGT 1091

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1092 PEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1144


>gi|345569679|gb|EGX52544.1| hypothetical protein AOL_s00043g38 [Arthrobotrys oligospora ATCC
            24927]
          Length = 1244

 Score =  558 bits (1439), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 359/985 (36%), Positives = 534/985 (54%), Gaps = 119/985 (12%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+ ++FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP+
Sbjct: 281  MAREWTFELDNFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPI 340

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQK+R+    F DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VIF
Sbjct: 341  KALSNQKFRDFRNIFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIF 400

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE+HY+ D+ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T  
Sbjct: 401  DEVHYVNDQERGVVWEEVIIMLPDHVNLILLSATVPNTQEFASWVGRTKKKDIYVISTPK 460

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK----------------- 291
            RP PL+HY++   G  ++ +VD+ ++F E       +    +K                 
Sbjct: 461  RPVPLEHYLW--AGKKMHKIVDQNKKFLETGLRDANEAMSGKKDERPNQSVPTRGNISQR 518

Query: 292  ---IGGRRENGKASGRMAKGGS---GSGGSDIFK-------------------IVKMIME 326
                GG    G  S R  +GG+   G+ G+  F                    +V+ + +
Sbjct: 519  GGQRGGPNHRGSQSARGGRGGNVMRGASGAASFNRGGRGGRTTANQDKNLWVHLVQHLKK 578

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
                P  +F FS++ CE++A ++S LD+ T  EK  +  + + ++  L  EDR LP I  
Sbjct: 579  EDLLPGCIFVFSKKRCEENADALSNLDYCTANEKSAIHMIVEKSIARLRIEDRQLPQIRR 638

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P +TVVF+ ++K
Sbjct: 639  LRDLLSRGIAVHHGGLLPIVKEMVEILFAKSLVKVLFATETFAMGLNLPTRTVVFSGIRK 698

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM--VDEQMEMNTLKDMVLGKPAPLVS 504
             DG S R + SGEYIQM+GRAGRRG D  G  II+   DE     TLK M+LG+P  L S
Sbjct: 699  HDGRSFRDLLSGEYIQMAGRAGRRGLDSSGTVIIVGNGDEAPPAGTLKTMILGQPTKLQS 758

Query: 505  TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA------ 558
             FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K V+  EE         
Sbjct: 759  QFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQTLLPEHQKMVTANEEGLKKLIRED 816

Query: 559  ------SLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
                   LD   EA +  Y KL  ++  L  K       P+    Y  SGR+I +++  +
Sbjct: 817  CIYCNEDLDTLHEAGIT-YKKLTQELHTLALK------NPQGKRMYC-SGRVIILQDKDS 868

Query: 613  DWGWGVVVNVVKKPSAGVGTLPS------RGG------GYIVPVQ---LPLISTLS---- 653
                GV++    +PS   G  P        GG      G  VP      P+I  ++    
Sbjct: 869  TRTIGVLI----RPSQTTGADPVIQILKLTGGNDQKIPGDAVPFNPLFAPVIRQVAGDKV 924

Query: 654  KIRLSVPP------------DLRPLDARQSILLAVQELESRFP---QGLP-------KLN 691
            KI+ +  P            D R  +AR      V++L        QGL           
Sbjct: 925  KIKETAVPLSQIEYISKTVVDARITEARTGKAAVVKQLLQELKELGQGLDDSAWTENDWT 984

Query: 692  PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM 751
             ++DM+ ++     +  +  EL+       L+  +     R    + ++  +I+ LK  +
Sbjct: 985  KIRDMRFQEV----MKGRKAELQKIKKCKSLSCPKFAKHFRARNEEYKLQEKIKNLKQLI 1040

Query: 752  RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
             D  +Q   D  + R RVLK+L  ID    VQLKGR AC I++ +EL++TEL+   T  D
Sbjct: 1041 SDQNLQLLPD-YEQRVRVLKQLDFIDESSRVQLKGRVACEINSANELVLTELILENTLAD 1099

Query: 812  LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD-EY 870
             +  ++ AL S F+  +K+     +  +L +  +++ E A+++ EIQ+E ++ +N + + 
Sbjct: 1100 FEPEEMVALLSAFVFQEKTDTVPVVPPKLERGKEKILEIAKRVNEIQSEHQVLINAETDD 1159

Query: 871  VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
             E   R  LM+V+Y W+KG +F  +  +TD+ EG+I+R   RLDE   ++R AA+ +G+ 
Sbjct: 1160 FEGRPRFGLMEVVYEWAKGMSFERITDLTDVLEGTIVRVITRLDETCREVRNAARIIGDP 1219

Query: 931  NLEKKFAAASESLRRGIMFSNSLYL 955
             L +K     E +RR I+   SLY 
Sbjct: 1220 ALYQKAEKCQEIIRRDIISCGSLYF 1244


>gi|354492827|ref|XP_003508546.1| PREDICTED: helicase SKI2W-like [Cricetulus griseus]
          Length = 1243

 Score =  557 bits (1436), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 342/950 (36%), Positives = 518/950 (54%), Gaps = 79/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            +SFE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 303  WSFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 362

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 363  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 422

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 423  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 482

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 483  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 541

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  V    Q
Sbjct: 542  GPAQDRGVYLSLLASLRARAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEVHLFLQ 601

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 602  RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 661

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 662  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 721

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 722  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 779

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ K++  LEE     D +G+ A++ +Y+    ++ +    +   I      L  L
Sbjct: 780  QALAELTKRLGALEEP----DVTGQLADLPDYYSWGEELTETRNMIQWRIMESVNGLKSL 835

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLPL 648
             +GR++ V+        GV++ V    ++ V T              R  G   P  +P 
Sbjct: 836  STGRVVVVKNKEHHNALGVILQVSSNSTSRVFTTLVLCDKPVVSESPRDKGPATP-DVPQ 894

Query: 649  ISTLSKIRLSVP----------------------------------------PDLRPLDA 668
               L   +L +P                                        P  R    
Sbjct: 895  PDDLVGFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKIVEDFTKRQQPKFRKDPP 954

Query: 669  RQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 955  LAAVTTAVQELLRLAQAHPSGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHS 1014

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1015 PRFPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1073

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 1074 AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGV 1132

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 1133 ERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1191

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A     R I+F+ SLY
Sbjct: 1192 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAGTXXXRDIVFAASLY 1241


>gi|224104331|ref|XP_002313400.1| predicted protein [Populus trichocarpa]
 gi|222849808|gb|EEE87355.1| predicted protein [Populus trichocarpa]
          Length = 943

 Score =  556 bits (1433), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 337/965 (34%), Positives = 537/965 (55%), Gaps = 103/965 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA ++ FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYA A+A +   R +YT+P+
Sbjct: 1   MALSFPFELDAFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPI 60

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           K +SNQKYR+   +F DVGL+TGDV++ P ASCL+MTTEILR MLYRG+++++++ WVIF
Sbjct: 61  KTISNQKYRDFCGKF-DVGLLTGDVSVRPEASCLIMTTEILRSMLYRGADIIRDIEWVIF 119

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERGVVWEE II LP  + +V LSAT+ N  +FA+WI    ++   V  T  
Sbjct: 120 DEVHYVNDVERGVVWEEVIIMLPRHVNIVLLSATVPNTVEFADWISRTKQKTIRVTGTTK 179

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK---IGGRRENGKASGRM 305
           RP PL+H +F    SG    + E E F        +  F K     +GG    G  +   
Sbjct: 180 RPVPLEHCLF---YSGELHRICEGEIFMPQGLKTAKYAFKKNNSTTVGG----GPGA--- 229

Query: 306 AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
             G S +  S   ++V  +++    PV++F FS+  C++ A S+S  D  +  EK  +  
Sbjct: 230 YTGPSVTQASLWLQLVSKLLKNSLLPVVIFCFSKNRCDKSADSLSGTDLTSSSEKSEIRV 289

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
               A   L   DRNLP I  +  LL RGIAVHH+GLLP++KE+VE+LF  G++K LF+T
Sbjct: 290 FCDKAFSRLKGSDRNLPQIVRVRSLLSRGIAVHHAGLLPIVKEVVEMLFCRGVIKVLFST 349

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DE 484
           ETFAMG+N PA+TVVF  ++K+DG   R +  GEY QM+GRAGRRG D  G  +++  DE
Sbjct: 350 ETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGIDKIGTVVVLCRDE 409

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
             E + LK +++G    L S FRL+Y  IL+L+ R E +   E ++K SF +F+ +K LP
Sbjct: 410 IPEESDLKRVIVGSATRLESQFRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFRSQKQLP 467

Query: 545 DIGKKV-SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
           +  K +  KL + A +++      + EY+ L L+  +   ++   + +      +L  GR
Sbjct: 468 EQQKVLMRKLAQPAKTVEY---PTIEEYYDLYLEAEKYGNQVSEAVMQSPHAQTFLTPGR 524

Query: 604 LIKVREGGTDWGWGVVVNV-----------VKKPSAG----------------------- 629
           ++ V+   +D   GVVV V           V KP A                        
Sbjct: 525 VVVVK-SLSDHLLGVVVKVTSASMKQYIVLVLKPDAPSVSSNLQDKKSADFQQGYVLMPK 583

Query: 630 ---------VGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLA----- 675
                      +L +R G   + ++LP     + I   V    R +++++ + +      
Sbjct: 584 SKRSCDEEYFSSLTNRKGSGTIKIELPYQGVAAGINYEV----RGIESKEFLCICNRKIT 639

Query: 676 ------------------VQEL------ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
                             VQ+L       +++P   P L+P+K++K++D  +V+  ++  
Sbjct: 640 IDQVRLLEDGSNAAFSKTVQQLLETKSDGNKYP---PALDPLKELKLKDVNLVEAYHKWT 696

Query: 712 ELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
            L  K+ ++  +   + E  I   +       E+  L+ +M D  +Q+  D  + R  VL
Sbjct: 697 SLLQKMASNKCHGCIKLEEHISLAKEIKRHKEEVSNLQFQMSDEALQQMPD-FQGRIYVL 755

Query: 771 KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
           K++G ID D VVQ+KGR AC +++G+EL+ TE +F    +DL+  +  A+ S F+   + 
Sbjct: 756 KEIGCIDGDLVVQIKGRVACEMNSGEELICTECLFENQLDDLEPEEAVAIMSAFVFQQRK 815

Query: 831 SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
           + + +L   L++  ++L  +A ++ E+Q+   ++VN +EY    ++  L++V+Y W+KG 
Sbjct: 816 TSEPSLTPRLSQAKKRLYSTAIRLGELQSNYNIQVNPEEYANENLKFGLVEVVYEWAKGT 875

Query: 891 TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
            FA++ ++TD+ EG I+R+  RLDE   + + AA  +G   + KK  +AS +++R I+F+
Sbjct: 876 PFADICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSAVYKKMESASNAIKRDIVFA 935

Query: 951 NSLYL 955
            SLY+
Sbjct: 936 ASLYV 940


>gi|432881494|ref|XP_004073810.1| PREDICTED: helicase SKI2W-like isoform 2 [Oryzias latipes]
          Length = 1227

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 356/950 (37%), Positives = 520/950 (54%), Gaps = 91/950 (9%)

Query: 62   NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            NP +       + FELD FQ+ ++  LE ++SV V+AHTSAGKT VAEYAIA++ +   R
Sbjct: 310  NPAFK------WPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTR 363

Query: 122  VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
             IYTSP+KALSNQK+R+    FKDVGL+TGDV LSP ++CL+MTTEILR MLY GSEV++
Sbjct: 364  TIYTSPIKALSNQKFRDFKTTFKDVGLLTGDVQLSPESACLIMTTEILRSMLYNGSEVIR 423

Query: 182  EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            ++ WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  
Sbjct: 424  DLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKKHI 483

Query: 242  HVVYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
            +V+ T  RP PL+H+++  G S      ++L+VD    F    +    D          R
Sbjct: 484  YVISTMKRPVPLEHHLY-TGNSTKTQKEMFLLVDAAGNFLTKGYYAAVDA------KKER 536

Query: 297  ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
             +  A    AK  S +  +          +R+  PV+ F+FSR  C+ +A S+  +D  T
Sbjct: 537  SSKHAQTFGAKNTSQNTTAS---------QRQQTPVVAFTFSRARCDDNARSLESMDLTT 587

Query: 357  QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
              EK  +   FQ ++  L   DR LP I LM  LLKRG+AVHHSG+LP++KE++E+LF  
Sbjct: 588  SVEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGVAVHHSGILPILKEVIEMLFSR 647

Query: 417  GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
            GLVK LFATETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  G
Sbjct: 648  GLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATG 707

Query: 477  ICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
              II+    + EM  L  M++GKP  L S FRL+Y  ILNL+ R E       ++K SF 
Sbjct: 708  TVIILCKAGVHEMADLHAMMMGKPTILQSQFRLTYTMILNLL-RVEA-LRVTDMMKRSFS 765

Query: 536  QFQYEKALPDIGKKVSKLEEEAAS---LDASGE-AEVAEYHKLKLDIAQLEKKLMSEITR 591
              +  +   +  K++S+L +  +S   LD  G+ +++  Y+    ++    + L   I  
Sbjct: 766  --ESHRNAQEHEKRISQLRQTLSSLPPLDPEGQLSDLLPYYHTVAELRVTNESLQKAIVE 823

Query: 592  PERVLYYLGSGRLIKVREGGTDWGWGVVVNVV---------------KKPSAGVGTLPSR 636
                L  L  GR++ V         GV++ V                K    G G  P  
Sbjct: 824  SVNGLKALSVGRVLVVNNKQHLNALGVILQVSSDAVNRTFTALIICEKGNEEGKGE-PDA 882

Query: 637  GGGYIVPVQL-----PLISTLSKIRLS------------VP------------PDLRPLD 667
               ++    L     P   T+ K++L             +P            P  R   
Sbjct: 883  ASPHLYNTALFIPEGPCSHTVQKLKLQDISAITVKTLKVIPDRIIDNYNKRQQPRFRHEP 942

Query: 668  ARQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              Q+I  A QE   L    P GL  L+PV D++++  +VV+   ++  L+  L +     
Sbjct: 943  PGQAISTATQELLRLAEANPGGLATLDPVNDLQLKSVDVVEGSMRLRLLQDSLKSFTCIH 1002

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
            S    +    Q +  V  E+ +L   + D  +     E   R +VL+ L +ID+ G VQL
Sbjct: 1003 SPTFAE----QERMSVQEELDRLLFLVSDQSL-TLLPEYHQRIKVLQSLQYIDSGGAVQL 1057

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I + + LL   L  N   + L   + AAL SC +   K+  + +L   L + +
Sbjct: 1058 KGRVACQISSHELLLTELLFEN-VMSPLAPEESAALLSCLVFTQKTQVEPHLTSTLKESI 1116

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +++   AR+I E+Q EC +    +E+V    +  L +V+YCW++G  FAE+  +TDI EG
Sbjct: 1117 ERVLSVARRIGELQRECGIPQTAEEFV-GQFKFGLTEVVYCWARGMPFAEIALLTDIQEG 1175

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +++R  +RLDE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1176 TVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLY 1225


>gi|348519375|ref|XP_003447206.1| PREDICTED: helicase SKI2W isoform 2 [Oreochromis niloticus]
          Length = 1225

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 351/953 (36%), Positives = 524/953 (54%), Gaps = 97/953 (10%)

Query: 62   NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            NP +       + FELD FQ+ +V  LE ++SV V+AHTSAGKT VAEYAIA++ +   R
Sbjct: 308  NPAFK------WPFELDVFQKQAVLRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTR 361

Query: 122  VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
             IYTSP+KALSNQK+R+    F DVGL+TGDV LSP +SCL+MTTEILR MLY GSEV++
Sbjct: 362  TIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLSPESSCLIMTTEILRSMLYNGSEVIR 421

Query: 182  EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            ++ WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  
Sbjct: 422  DLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRHI 481

Query: 242  HVVYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
            +V+ T  RP PL+HY++  G S      ++L++D    F    +    D   K++   + 
Sbjct: 482  YVISTLKRPVPLEHYLY-TGNSTKTQKEMFLLLDATGNFLTKGYYTAVDA--KKERTSKH 538

Query: 297  ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
                 +   ++  + S             +R+  PV+ F+FSR  C+ +A S+  +D  T
Sbjct: 539  AQSFGTKNTSQNTTAS-------------QRQQTPVVAFTFSRTRCDDNARSLDSMDLTT 585

Query: 357  QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
              EK  +   FQ ++  L   DR LP I LM  LLKRGIAVHHSG+LP++KE++E+LF  
Sbjct: 586  SIEKAEIHSFFQKSLTRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVIEMLFSR 645

Query: 417  GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
            GLVK LFATETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  G
Sbjct: 646  GLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATG 705

Query: 477  ICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
              II+    + EM  L  M+LGKP  L S FRL+Y  ILNL+ R E     + +++ SF 
Sbjct: 706  TVIILCKAGVHEMADLHAMMLGKPTLLQSQFRLTYTMILNLL-RVEALHVTD-MMRRSFS 763

Query: 536  QFQYEKALPDIGKKVSKLEEEAA---SLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITR 591
            +   +    +  K++S+L++  +   S+D  G+ +++  Y+    ++ +  + +   I  
Sbjct: 764  ESHRDTQTHE--KRISQLKQMLSAMPSVDTEGQLSDLLPYYHTVTELKKTREAVQHAILE 821

Query: 592  PERVLYYLGSGRLIKVREGGTDWGWGVVVNVV---------------KKPSAGVGT---- 632
                L  L  GR+I V         GV++ V                K    G G     
Sbjct: 822  SVNGLKALSVGRVIVVNNKQHLNALGVILQVSSDSVNRTFTALIICEKGNEEGKGNDNAA 881

Query: 633  LPSRGGGYIVPVQLPLISTLSKIRLS------------VP------------PDLRPLDA 668
            LP      +   + P   T+ K++L             +P            P  +    
Sbjct: 882  LPHLHNMSLFIPEGPCSHTVQKLKLQDISAITVKTLKVIPERIIDNYNKRQQPRFKLDPP 941

Query: 669  RQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
             Q+I  A QE   L    P G+  L+PV D++++  +VV+   ++  L+  L        
Sbjct: 942  GQAISTATQELLRLAEANPSGIATLDPVNDLQLKSVDVVEANMRLRVLQESL-------- 993

Query: 726  QDENQIR----CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            +D N I       Q +  +  E+ QL   + D  +     E   R +VL+ L +ID  G 
Sbjct: 994  RDFNCIHSPMFAEQERMSLQEELDQLLFLVSDQSL-TLLPEYHQRIKVLQSLQYIDNGGA 1052

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            VQLKGR AC I + + LL   L  N   + L   + AAL SC +    +  + ++   L 
Sbjct: 1053 VQLKGRVACQISSHELLLTELLFEN-VLSPLAPEESAALLSCLVFTQNTQVEPHITNTLQ 1111

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +++++  A++I E+Q EC +    +E+V    +  L +V+YCW++G  FAE+ Q+TD+
Sbjct: 1112 EGIERVKSVAQRIGELQRECGIPQTAEEFV-GQFKFGLTEVVYCWARGMPFAEIAQLTDV 1170

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG+++R  +RLDE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1171 QEGTVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLY 1223


>gi|213626368|gb|AAI71377.1| Skiv2l protein [Danio rerio]
          Length = 1249

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 348/943 (36%), Positives = 524/943 (55%), Gaps = 71/943 (7%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            Y FELD FQ+ ++  LE ++SV V+AHTSAGKT VAEYAIA++ +   R IYTSP+KALS
Sbjct: 315  YPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSPIKALS 374

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L+P  SCL+MTTEILR MLY GSEV++++ WVIFDE+H
Sbjct: 375  NQKFRDFKNTFGDVGLLTGDVQLNPEGSCLIMTTEILRSMLYNGSEVIRDLEWVIFDEVH 434

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  +V+ T  RP P
Sbjct: 435  YINDAERGVVWEEVLIMLPEHVSIILLSATVPNAVEFSEWIGRIKKRHIYVISTIKRPVP 494

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY++  G S      L++++D    F    +    +   K++     ++         
Sbjct: 495  LEHYLY-TGNSTKTQKELFMLLDATGNFLTKGYYAAVEA-KKERTSKHAQSFGTKNVSQH 552

Query: 308  GGSGSGGSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
              + S    +++ ++  + +R+  PV+ F+FSR  C+++A S++ LD  T  EK  +   
Sbjct: 553  NTTASQDRAVWQTLLNYLSQRQQTPVVAFTFSRTRCDENARSLTSLDLTTSIEKSEIHSF 612

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
             Q ++  L   DR LP I LM  LLKRGI VHHSG+LP++KE++E+LF  GLVK LFATE
Sbjct: 613  LQKSLTRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPILKEVIEMLFSRGLVKVLFATE 672

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
            TFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  G  II+    +
Sbjct: 673  TFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILCKAGV 732

Query: 487  -EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
             +M  L  M+LGKP  L S FRL+Y  ILNL+ R E       ++K SF +   +    +
Sbjct: 733  HDMGELHSMMLGKPTVLHSQFRLTYTMILNLL-RVEA-LRVTDMMKRSFSENHRDTQAHE 790

Query: 546  IGKKVSKLEEEAAS---LDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
              K++S+L    +S   LD  G+ +++  Y+    ++    + L   +      L  L  
Sbjct: 791  --KRISELRNTLSSLPPLDTEGQLSDLLSYYHTITELHITTQSLQQAVLESVNGLKALSV 848

Query: 602  GRLIKVREGGTDWGWGVVVNVVKKPSAGVGT----------------------LPSRGGG 639
            GR++ V         GV++ V         T                      LP     
Sbjct: 849  GRVVIVNNSQHHNSLGVILQVSSDAVNRTFTALIICEKGNEEAASDDQSNKVALPIYSKT 908

Query: 640  YIVP----------VQLPLISTLSKIRLSVPPD---------LRP---LDAR-QSILLAV 676
              +P          ++L  IS ++   L V P+         L+P   LD   Q+I  A 
Sbjct: 909  LFIPEGPCSHTVQKLKLQDISAITTKALKVIPERIIDNYNKRLQPRFRLDPPGQAISTAT 968

Query: 677  QEL----ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA-HPLNKSQDENQI 731
            QEL    E+    G+  L+PV D+ ++  +VV+ V +   L+  L   H ++      Q 
Sbjct: 969  QELLRLAEANM-SGMTVLDPVNDLHLKGVDVVEGVMRQRVLQDSLKDFHCIHSPTFSEQF 1027

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
               Q +  V  E+ +L   + D  +     E   R +VL+ L ++D+ G VQLKGR AC 
Sbjct: 1028 TRVQERMSVQEELDKLLFLVSDQSL-TLLPEYHQRIKVLEALQYVDSSGAVQLKGRVACQ 1086

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            I + + LL   L  N T + L   + AAL SC +    +  + ++   L + + Q+   A
Sbjct: 1087 ISSHELLLTELLFEN-TLSPLAPEESAALLSCLVFTQNTQIEPHITNTLQEGINQVLAVA 1145

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            ++I ++Q +C +    +++V +  +  L +V+YCW++G  FAE+ Q+TD+ EG+I+R  +
Sbjct: 1146 QRIGDLQRDCGIAQTAEDFV-AQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTIVRCIQ 1204

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            RLDE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1205 RLDEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLY 1247


>gi|344307274|ref|XP_003422307.1| PREDICTED: helicase SKI2W [Loxodonta africana]
          Length = 1246

 Score =  553 bits (1426), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 344/950 (36%), Positives = 524/950 (55%), Gaps = 80/950 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A      
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGTFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHH 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRARAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLQRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF  ++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDTMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F         
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAQ 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E++L ++ K++  LEE     D +G+  ++ EY+    ++ +    +   I      L  
Sbjct: 783  EQSLVELTKRLEALEEP----DVTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT-------------------------- 632
            L +GR++ V+        GV++ V    ++ V T                          
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPMSEDPRDKGPATRDVPFP 898

Query: 633  ---------LPSRGGGYIV----PVQLPLISTLSKIRLSVPPDLRPLDARQ--------- 670
                     LP     ++V    P  +  I+T   +R++    L   + RQ         
Sbjct: 899  DDLVGFKLFLPEGPCDHVVAKLQPGDVAAITT-KVLRVNGEKILEDFNKRQQPKFKKDPP 957

Query: 671  --SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNK 724
              ++  AVQE   L   +P G   L+PV D++++D  VV+   +  +LE  +  A  ++ 
Sbjct: 958  FAAVTTAVQELLRLAQAYPAGPLTLDPVNDLQLKDVSVVEGGLRARKLEELIQGAQCVHS 1017

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             +   Q    + + ++  EI++L+  + D  +     E   R  VL+ LG++D  G V+L
Sbjct: 1018 PRFPAQYLKLRERVQIQKEIERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKL 1076

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
             GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +
Sbjct: 1077 AGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSSGDPGDQLPSTLKQGV 1135

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            ++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG
Sbjct: 1136 ERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEG 1194

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1195 LVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|240255527|ref|NP_190280.5| antiviral helicase SKI2 [Arabidopsis thaliana]
 gi|332644703|gb|AEE78224.1| antiviral helicase SKI2 [Arabidopsis thaliana]
          Length = 1347

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 350/1012 (34%), Positives = 547/1012 (54%), Gaps = 143/1012 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + FELD FQ+ ++ CLE+ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 352  DMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 411

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+   +F DVGL+TGDV++ P ASCL+MTTEILR MLYRG+++++++ WVI
Sbjct: 412  IKTISNQKYRDFCGKF-DVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 470

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  I  V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 471  FDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTT 530

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT-----------FLKQKIGGR- 295
             RP PL+H +F  G   LY V  E E F        +D+             KQ++G   
Sbjct: 531  KRPVPLEHCLFYSG--ELYKVC-ENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSA 587

Query: 296  ----------------RENGKAS----GRMAKGGSG--------SGGSDIFKIVKMIMER 327
                            ++N  +S    G+ +  G+         S  S+   ++  + + 
Sbjct: 588  HQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKM 647

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
               PV+VF FS+  C++ A +++  D  +  EK  +      A   L   DRNLP +  +
Sbjct: 648  SLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRL 707

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
              LL RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF A++K+
Sbjct: 708  QSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKF 767

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTF 506
            DG   R +  GEY QM+GRAGRRG D  G  ++M  DE  + + L+ +++G    L S F
Sbjct: 768  DGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQF 827

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD------IGKKVSKLEEEAASL 560
            RL+Y  IL+L+ R E +   E ++K SF +F  +K LP+      I + +     E    
Sbjct: 828  RLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIEC--- 882

Query: 561  DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG-GTDWGWGVV 619
               GE  + +Y+ + ++  +   K+   + +      +L  GR++ ++ G G D   G+V
Sbjct: 883  -IKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGIV 941

Query: 620  ---------------------------VNVVKK---PSAGVGTLP--------------- 634
                                       V++ KK   PS G    P               
Sbjct: 942  LKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEFYTKPS 1001

Query: 635  SRGGGYIVPVQLP--------------------LISTLSKIRLS---VPPDLRPLDARQS 671
            SR G  ++ ++LP                    L    SKI++    +  D       Q+
Sbjct: 1002 SRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQT 1061

Query: 672  I--LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDEN 729
            +  LL ++   ++FP   P L+PVKD+K++D E+V+   +   L  K+    +NK     
Sbjct: 1062 VQQLLDLKSDGNKFP---PALDPVKDLKLKDAELVETYYKWTNLLQKM---SMNKCHGCV 1115

Query: 730  QIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL------KNRSRVLKKLGHIDADGVVQ 783
            ++   +   ++  EI++ K+ ++D + Q   + L      + R  VLK +G ID D VVQ
Sbjct: 1116 KL---EEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVVQ 1172

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            +KGR AC +++G+EL+ T  +F   F +L+  +  A+ S F+   K++    L  +LAK 
Sbjct: 1173 IKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAKA 1232

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
             Q+L ++A ++ E+Q +  L+++ +EY +  ++  L++V+Y W+KG  FAE+ ++TD+ E
Sbjct: 1233 KQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPE 1292

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G I+R+  RLDE   + + AA  +G   L KK  AAS +++R I+F+ SLY+
Sbjct: 1293 GLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYV 1344


>gi|6522577|emb|CAB61942.1| putative helicase [Arabidopsis thaliana]
          Length = 1347

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 352/1017 (34%), Positives = 549/1017 (53%), Gaps = 144/1017 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + FELD FQ+ ++ CLE+ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 343  DMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 402

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+   +F DVGL+TGDV++ P ASCL+MTTEILR MLYRG+++++++ WVI
Sbjct: 403  IKTISNQKYRDFCGKF-DVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 461

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  I  V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 462  FDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTT 521

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT-----------FLKQKIGGR- 295
             RP PL+H +F  G   LY V  E E F        +D+             KQ++G   
Sbjct: 522  KRPVPLEHCLFYSG--ELYKVC-ENEVFLSKGIKDAKDSQKKKNSNAVSVAPKQQMGSSA 578

Query: 296  ----------------RENGKAS----GRMAKGGSG--------SGGSDIFKIVKMIMER 327
                            ++N  +S    G+ +  G+         S  S+   ++  + + 
Sbjct: 579  HQDGSKSQKHEAHSRGKQNKHSSVKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKM 638

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
               PV+VF FS+  C++ A +++  D  +  EK  +      A   L   DRNLP +  +
Sbjct: 639  SLLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRL 698

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
              LL RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF A++K+
Sbjct: 699  QSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKF 758

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTF 506
            DG   R +  GEY QM+GRAGRRG D  G  ++M  DE  + + L+ +++G    L S F
Sbjct: 759  DGKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQF 818

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD------IGKKVSKLEEEAASL 560
            RL+Y  IL+L+ R E +   E ++K SF +F  +K LP+      I + +     E   L
Sbjct: 819  RLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIEIDLL 876

Query: 561  DAS-----GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG-GTDW 614
              S     GE  + +Y+ + ++  +   K+   + +      +L  GR++ ++ G G D 
Sbjct: 877  IYSSRCIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDN 936

Query: 615  GWGVV---------------------------VNVVKK---PSAGVGTLP---------- 634
              G+V                           V++ KK   PS G    P          
Sbjct: 937  LLGIVLKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEF 996

Query: 635  -----SRGGGYIVPVQLP--------------------LISTLSKIRLS---VPPDLRPL 666
                 SR G  ++ ++LP                    L    SKI++    +  D    
Sbjct: 997  YTKPSSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKA 1056

Query: 667  DARQSI--LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
               Q++  LL ++   ++FP   P L+PVKD+K++D E+V+   +   L  K+    +NK
Sbjct: 1057 AFSQTVQQLLDLKSDGNKFP---PALDPVKDLKLKDAELVETYYKWTNLLQKM---SMNK 1110

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL------KNRSRVLKKLGHIDA 778
                 ++   +   ++  EI++ K+ ++D + Q   + L      + R  VLK +G ID 
Sbjct: 1111 CHGCVKL---EEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDD 1167

Query: 779  DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRM 838
            D VVQ+KGR AC +++G+EL+ T  +F   F +L+  +  A+ S F+   K++    L  
Sbjct: 1168 DLVVQIKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTP 1227

Query: 839  ELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQM 898
            +LAK  Q+L ++A ++ E+Q +  L+++ +EY +  ++  L++V+Y W+KG  FAE+ ++
Sbjct: 1228 KLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICEL 1287

Query: 899  TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            TD+ EG I+R+  RLDE   + + AA  +G   L KK  AAS +++R I+F+ SLY+
Sbjct: 1288 TDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYV 1344


>gi|297819300|ref|XP_002877533.1| hypothetical protein ARALYDRAFT_323324 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297323371|gb|EFH53792.1| hypothetical protein ARALYDRAFT_323324 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1369

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 349/1019 (34%), Positives = 551/1019 (54%), Gaps = 148/1019 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + FELD FQ+ ++ CLE+ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 365  DMAIEFPFELDNFQKEAICCLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 424

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+   +F DVGL+TGDV++ P ASCL+MTTEILR MLYRG+++++++ WVI
Sbjct: 425  IKTISNQKYRDFCGKF-DVGLLTGDVSIRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 483

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  I  V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 484  FDEVHYVNDVERGVVWEEVIIMLPRHINFVLLSATVPNTFEFADWIGRTKQKEIRVTGTT 543

Query: 248  FRPTPLQHYVFPVGGSGLYLVVD-------------EKEQFREDNFVKL----------- 283
             RP PL+H +F  G   LY V +             + ++ +  N V +           
Sbjct: 544  KRPVPLEHCLFYSG--ELYKVCENEVFIPKGIKDAKDSQKKKTSNAVSVAPKQYTGSSAH 601

Query: 284  QDTFLKQK-------IGGRRENGKASGRMAKGGSG--------SGGSDIFKIVKMIMERK 328
            QD    QK          +  + K  G+ +  G+         S  S+   ++  + ++ 
Sbjct: 602  QDGNKSQKHEAHSRGKQNKHSSAKDVGKSSYSGNSQNNGAFRRSAASNWLLLINKLSKKS 661

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
              PV+VF FS+  C++ A +++  D  +  EK  +      A   L   DRNLP +  + 
Sbjct: 662  LLPVVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRLFCDKAFSRLKGSDRNLPQVLRVQ 721

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF A++K+D
Sbjct: 722  SLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFD 781

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFR 507
            G   R +  GEY QM+GRAGRRG D  G  ++M  DE  + + L+ +++G    L S FR
Sbjct: 782  GKEFRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFR 841

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK--------KVSKLEEE--- 556
            L+Y  IL+L+ R E +   E ++K SF +F  +K LP+  +         +  +E +   
Sbjct: 842  LTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKRSLPIKNIEADLLI 899

Query: 557  AASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG-GTDWG 615
             +S    GE  + +Y+ + ++  +   K+   + +      +L  GR++ ++ G G D  
Sbjct: 900  YSSRCIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQNFLVPGRVVVMKSGTGIDNL 959

Query: 616  WGVV---------------------------VNVVKK---PSAGVGTLP----------- 634
             GVV                           V++ KK   PS G    P           
Sbjct: 960  LGVVLKGPSNTNRQYVVLVTKSEIPPPEKNMVSIGKKSSEPSQGYFIAPKSKRGFEEEFY 1019

Query: 635  ----SRGGGYIVPVQLP--------------------LISTLSKIRLSVPPDLRPL-DAR 669
                SR G  ++ ++LP                    L    SKI++     +R L D  
Sbjct: 1020 TKPSSRKGSVVIKIELPYHGVAAGVGYEAKGFDNKEFLCICDSKIKID---QVRLLEDGN 1076

Query: 670  QSI-------LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
            +S        LL ++   +++P   P L+P+KD+K++D E V+   +   L  K+    +
Sbjct: 1077 KSAFSQTVQQLLDLKSDGNKYP---PPLDPIKDLKLKDAESVETYYKWTSLLQKM---SM 1130

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL------KNRSRVLKKLGHI 776
            NK     ++   +   ++  EI++ K+ ++D + Q   + L      + R  VLK +G I
Sbjct: 1131 NKCHGCVKL---EEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCI 1187

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D D VVQ+KGR AC +++G+EL+ T  +F   F +L+  +  A+ S F+   K++   +L
Sbjct: 1188 DDDLVVQIKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPSL 1247

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
              +LAK  Q+L ++A ++ E+Q +  L+++ +EY +  ++  L++V+Y W+KG  FAE+ 
Sbjct: 1248 TSKLAKAKQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEIC 1307

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ++TD+ EG I+R+  RLDE   + + AA  +G   L KK  AAS +++R I+F+ SLY+
Sbjct: 1308 ELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYV 1366


>gi|113678409|ref|NP_001038366.1| helicase SKI2W [Danio rerio]
 gi|94733402|emb|CAK04564.1| novel protein similar to vertebrate superkiller viralicidic activity
            2-like 2 (S. cerevisiae) (SKIV2L2) [Danio rerio]
          Length = 1230

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 349/941 (37%), Positives = 520/941 (55%), Gaps = 86/941 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            Y FELD FQ+ ++  LE ++SV V+AHTSAGKT VAEYAIA++ +   R IYTSP+KALS
Sbjct: 315  YPFELDVFQKQAILRLEAHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSPIKALS 374

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L+P  SCL+MTTEILR MLY GSEV++++ WVIFDE+H
Sbjct: 375  NQKFRDFKNTFGDVGLLTGDVQLNPEGSCLIMTTEILRSMLYNGSEVIRDLEWVIFDEVH 434

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  +V+ T  RP P
Sbjct: 435  YINDAERGVVWEEVLIMLPEHVSIILLSATVPNAVEFSEWIGRIKKRHIYVISTIKRPVP 494

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY++  G S      L++++D    F    +           +  ++E      R +K
Sbjct: 495  LEHYLY-TGNSTKTQKELFMLLDATGNFLTKGYYA--------AVEAKKE------RTSK 539

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
                 G  ++ +      +R+  PV+ F+FSR  C+++A S++ LD  T  EK  +    
Sbjct: 540  HAQSFGTKNVSQHNTTASQRQQTPVVAFTFSRTRCDENARSLTSLDLTTSIEKSEIHSFL 599

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q ++  L   DR LP I LM  LLKRGI VHHSG+LP++KE++E+LF  GLVK LFATET
Sbjct: 600  QKSLTRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPILKEVIEMLFSRGLVKVLFATET 659

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  G  II+    + 
Sbjct: 660  FAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILCKAGVH 719

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
            +M  L  M+LGKP  L S FRL+Y  ILNL+ R E       ++K SF +   +    + 
Sbjct: 720  DMGELHSMMLGKPTVLHSQFRLTYTMILNLL-RVEA-LRVTDMMKRSFSENHRDTQAHE- 776

Query: 547  GKKVSKLEEEAAS---LDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
             K++S+L    +S   LD  G+ +++  Y+    ++    + L   +      L  L  G
Sbjct: 777  -KRISELRNTLSSLPPLDTEGQLSDLLSYYHTITELHITTQSLQQAVLESVNGLKALSVG 835

Query: 603  RLIKVREGGTDWGWGVVVNVVKKPSAGVGT----------------------LPSRGGGY 640
            R++ V         GV++ V         T                      LP      
Sbjct: 836  RVVIVNNSQHHNSLGVILQVSSDAVNRTFTALIICEKGNEEAASDEQSNKVALPIYSKTL 895

Query: 641  IVP----------VQLPLISTLSKIRLSVPPD---------LRP---LDAR-QSILLAVQ 677
             +P          ++L  IS ++   L V P+         L+P   LD   Q+I  A Q
Sbjct: 896  FIPEGPCSHTVQKLKLQDISAITTKALKVIPERIIDNYNKRLQPRFRLDPPGQAISTATQ 955

Query: 678  ELESRFPQ----GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC 733
            EL  R  +    G+  L+PV D+ ++  +VV+ V +   L+  L       S   ++   
Sbjct: 956  EL-LRLAEANMGGMTVLDPVNDLHLKGVDVVEGVMRQRVLQDSLKDFHCIHSPTFSE--- 1011

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
             Q +  V  E+ +L   + D  +     E   R +VL+ L ++D+ G VQLKGR AC I 
Sbjct: 1012 -QERMSVQEELDKLLFLVSDQSL-TLLPEYHQRIKVLEALQYVDSSGAVQLKGRVACQIS 1069

Query: 794  TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
            + + LL   L  N T + L   + AAL SC +    +  + ++   L + + Q+   A++
Sbjct: 1070 SHELLLTELLFEN-TLSPLAPEESAALLSCLVFTQNTQIEPHITNTLQEGINQVLAVAQR 1128

Query: 854  IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            I ++Q +C +    +++V +  +  L +V+YCW++G  FAE+ Q+TD+ EG+I+R  +RL
Sbjct: 1129 IGDLQRDCGIAQTAEDFV-AQFKFGLTEVVYCWARGMPFAEIAQLTDVQEGTIVRCIQRL 1187

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            DE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1188 DEVLKEVRQAARIVGDSVLGSKMERASLAIRRDIVFTASLY 1228


>gi|296197764|ref|XP_002746413.1| PREDICTED: helicase SKI2W isoform 2 [Callithrix jacchus]
          Length = 1082

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 352/959 (36%), Positives = 519/959 (54%), Gaps = 98/959 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 143  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 202

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 203  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 262

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 263  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 322

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 323  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 381

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 382  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 441

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 442  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 501

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 502  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 561

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 562  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 619

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  L
Sbjct: 620  QALAELTKRLGALEEP----DVTGQLLDLPEYYSWGEELTETQHMIQRHIMESVNGLKSL 675

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             +  G   P ++P  
Sbjct: 676  SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSKDPQDRGPATP-EVPYP 734

Query: 650  STLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVKDM 696
              L   +L +P          L+P D  A  + +L V     LE    +  PK       
Sbjct: 735  DDLVGFKLFLPEGRCDHTVIKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFK----- 789

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIRC 733
              +DP +  +   ++EL     AHP                       L   + E  IR 
Sbjct: 790  --KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIRG 847

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHIDA 778
             Q         Q LK + R  QIQK  + L+                R  VL+ LG++D 
Sbjct: 848  AQCVHSPRFPAQYLKLRER-RQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDE 906

Query: 779  DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQIN 835
             G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N
Sbjct: 907  AGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN 965

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
                L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+
Sbjct: 966  ---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSEL 1021

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
              ++   EG I+R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1022 AGLSGTPEGLIVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1080


>gi|387016320|gb|AFJ50279.1| Helicase SKI2W-like [Crotalus adamanteus]
          Length = 1274

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 352/953 (36%), Positives = 530/953 (55%), Gaps = 74/953 (7%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA++ +   R IYTSP+K
Sbjct: 326  AFKWPFEPDVFQKQAILHLEKHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSPIK 385

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQK+R+    F DVGL+TGDV L P+ASCL+MTTEILR MLY GS+VL+++ WVIFD
Sbjct: 386  ALSNQKFRDFKNTFGDVGLLTGDVQLHPDASCLIMTTEILRSMLYNGSDVLRDLEWVIFD 445

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  +FA+WI  + ++  +V+ T  R
Sbjct: 446  EVHYINDSERGVVWEEVLIMLPDHVNIILLSATVPNTLEFADWIGRIKRKKIYVISTLKR 505

Query: 250  PTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
            P PL+HY++  G S      L+L+VD +  F    +    +   ++     +  G     
Sbjct: 506  PVPLEHYLY-TGNSQKTQKELFLLVDARGTFLTKGYYDAVEAKKERSSKHSQTFGAKQPM 564

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             A  G G   +    ++ M+ ++   PV+ F+FSR  C+++A  ++ +D  T  EK  + 
Sbjct: 565  HAGAGPGQDKNIWLSLIDMLRKKDQLPVVAFTFSRNRCDENASMLTTVDLTTTTEKSEIH 624

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
              FQ  +  L   DR LP +  M+ LLKRGI VHHSG+LP++KE+VE+LF +GLVK LFA
Sbjct: 625  VFFQKCISRLKGTDRQLPQVLHMVDLLKRGIGVHHSGILPILKEVVEMLFSKGLVKILFA 684

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETFAMG+NMPA+TVVF +V+K DG + R +   EYIQM+GRAGRRG D  G+ II+   
Sbjct: 685  TETFAMGVNMPARTVVFNSVRKHDGANFRDLVPAEYIQMAGRAGRRGLDTTGMVIILCKN 744

Query: 485  QM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            Q+ EM+ L  M+LGKP  L S FRL+Y  ILNL+ R E     E +++ SF +F   K  
Sbjct: 745  QVPEMSDLHRMMLGKPTRLQSQFRLTYTMILNLL-RVEA-LRVEDMMRRSFSEFHTRKDS 802

Query: 544  PDIGKKVSKLEEEAASL---DASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
                 ++++L    AS+   D S +  ++ EY+ +  ++ ++ +++   +      L  L
Sbjct: 803  KVYEHRIAQLSSMLASMEIPDTSRQLGDLQEYYSVVRELQEIRERVQRRVMESVSGLKAL 862

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVK------------------------------KPSAG 629
              GR+I V         GV++ V                                 PSA 
Sbjct: 863  SVGRVIVVNNQEHKNALGVILQVSSDSANRTFSTLVMCEKNSVERGLTEGQEWNPPPSAE 922

Query: 630  VGT----------LPSRGGGYIV----PVQLPLIST----------LSKIRLSVPPDLRP 665
            V            LP    G+ +    P  +  ++T          L   R    P  R 
Sbjct: 923  VPLPEDLLHTKLFLPEGPCGHTIKKLGPADILGVTTKTLRVNAERILEDFRKRQMPRFRN 982

Query: 666  LDARQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA-HP 721
                 S   A QE   L    P+GLP L+PV D++++D EVV+ + +   LE  L     
Sbjct: 983  DPPGPSAATATQELLRLAEGSPEGLPLLDPVNDLQLKDLEVVESMIRARNLEEHLPEFQC 1042

Query: 722  LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
            ++      +   F+ +  V  E++QL+  + D  +     E   R  VL+ LG+I+  G 
Sbjct: 1043 VHSPLFHIEFVRFRERQRVLDELEQLRFLLSDQSLLL-LPEYHQRVEVLRSLGYINEGGA 1101

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            V+LKG  A  I +  ELL+T+L+ +    DL   ++ AL SC +   ++  +  L   L 
Sbjct: 1102 VELKGSVARQI-SNHELLLTQLLLDNALTDLRPEEIVALLSCTVCQVRTQVEPQLPSVLQ 1160

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            K ++ ++  A +IA +Q +C L+ +V+++VE   +  L++V+Y W++G  FAE+  +TD+
Sbjct: 1161 KGIEHIRSVAEQIALLQRKCGLQESVEDFVEQ-YKFGLVEVVYEWARGMPFAEIAHLTDV 1219

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG I+R  +RLDE   ++R AA+  GE  L  K  AAS  ++R I+F+ SLY
Sbjct: 1220 QEGIIVRCIQRLDETCREMRNAARVTGEPTLHAKMEAASNMIKRDIVFAASLY 1272


>gi|403307798|ref|XP_003944370.1| PREDICTED: helicase SKI2W isoform 1 [Saimiri boliviensis boliviensis]
          Length = 1246

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 352/959 (36%), Positives = 518/959 (54%), Gaps = 98/959 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  L
Sbjct: 784  QALAELTKRLGALEEP----DVTGQLVDLPEYYSWGEELTETQHMIQRHIMESVNGLKSL 839

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             +  G   P  +P  
Sbjct: 840  SAGRVVIVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKSLSKDQQDSGPATP-DVPYP 898

Query: 650  STLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVKDM 696
              L   +L +P          L+P D  A  + +L V     LE    +  PK       
Sbjct: 899  DDLVGFKLFLPEGPCDHTVIKLQPRDIAAITTKVLRVNGEKILEDFSKRQQPKFK----- 953

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIRC 733
              +DP +  +   ++EL     AHP                       L   + E  IR 
Sbjct: 954  --KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRG 1011

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHIDA 778
             Q         Q LK + R  QIQK  + L+                R  VL+ LG++D 
Sbjct: 1012 AQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDE 1070

Query: 779  DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQIN 835
             G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N
Sbjct: 1071 AGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN 1129

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
                L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+
Sbjct: 1130 ---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSEL 1185

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
              ++   EG I+R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1186 AGLSGTPEGLIVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|290984980|ref|XP_002675204.1| predicted protein [Naegleria gruberi]
 gi|284088799|gb|EFC42460.1| predicted protein [Naegleria gruberi]
          Length = 843

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 326/899 (36%), Positives = 505/899 (56%), Gaps = 74/899 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y F+LD FQ+ +V  LE NESV VSAHTSAGKT VAEYAIA+A +   RVIYTSP+
Sbjct: 1   MAIQYPFDLDIFQKEAVYHLENNESVFVSAHTSAGKTVVAEYAIALAQKHLTRVIYTSPI 60

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           K LSNQK+RE  + F DVG++TGDV ++P A+CL+MTTEILR MLY+G++++++V WVIF
Sbjct: 61  KTLSNQKFREFKKTFGDVGILTGDVQINPTATCLIMTTEILRSMLYKGADLIRDVEWVIF 120

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERGVVWEE II LP  I ++ LSAT+ N   FA+W+    K+  HV+ T  
Sbjct: 121 DEVHYVNDPERGVVWEEVIIMLPKHINLILLSATIPNTYDFADWVGRTKKKKIHVIQTFK 180

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL+H+++  G   +Y +VD   +F                  G R    A     + 
Sbjct: 181 RPVPLEHHLYYNG--NIYKIVDSNSKFLA---------------AGYRSALSAEEEKEEK 223

Query: 309 GSGSGG---SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
               GG   +   K+++ + ++   P + F FSR++CE  A+S+   D N   EK+ + +
Sbjct: 224 NKSRGGFKKTPYSKLIETLNKKNLLPAVTFVFSRKQCEDIAISLQNTDLNEAGEKNEIHR 283

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
               +V  L   D+ LP I  +  LLKRGI +HHSGLLP++KE+VE+LF +GL+K LFAT
Sbjct: 284 FINQSVSRLKGSDKELPQIVRISDLLKRGIGIHHSGLLPIVKEIVEILFSKGLIKVLFAT 343

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ETFAMG+N P KTVVF  + K+DG   R + SGEYIQMSGRAGRRG D  G  II    +
Sbjct: 344 ETFAMGVNSPTKTVVFNTLWKFDGRDKRDLLSGEYIQMSGRAGRRGLDTVGNVIINCASE 403

Query: 486 M-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
           + E   L+ ++LGK   L S F+LSY  ILNLM R E  F  + +IK SF + + ++ +P
Sbjct: 404 IPEEPLLQRLILGKATHLESKFKLSYNMILNLM-RVE-DFKIQDMIKRSFSESRTQQIVP 461

Query: 545 D---IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
           +   + K   KL E       +GE  +  ++ +  D+  L  K+  E+    +       
Sbjct: 462 NKELLLKSKEKLAEIENIDCINGEPAIEPFYAVARDLEDLNYKITMEVMTNSK------- 514

Query: 602 GRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPP 661
                            +  ++  PS  + T+ +         +L L S++ +   S   
Sbjct: 515 -----------------LSTLIACPSYDILTICNE--------KLNLTSSMEE--FSFHK 547

Query: 662 DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
           +   + A  + L+ + + +   P     +N VK++K+   E  + +++ +++  KL  + 
Sbjct: 548 ETSEMRAAANQLINIWKEKPPTP-----MNIVKELKLSSLEFTEALSKRQQIILKLQENK 602

Query: 722 LNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
            N     E       ++ ++   + +L+  + D  ++    E++ R +VLK L ++D D 
Sbjct: 603 CNICPKLEEHFDKIDKQHKIRQGLDKLRYALSDENLE-LMPEVRKRIKVLKLLKYVDIDE 661

Query: 781 VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
            VQLKGR AC +++ DE+LVTE++F   F  +   +  A+ SC +   +   +      L
Sbjct: 662 TVQLKGRVACELNSCDEMLVTEMIFENFFTTMTCEEAVAVLSCLVCQSRGESE---EPTL 718

Query: 841 AKPLQQLQESARKIA----EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
            K LQ+L++    +A    ++Q E  L+ +  +Y+  T+   +M+V Y W+ G  F ++ 
Sbjct: 719 TKRLQELKDKVSNLALSLGQLQMENGLDTSPTDYLSKTLNFSMMEVAYEWAMGQEFKDIC 778

Query: 897 QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +T I EG+++RS  +LD+ L  +R AA+ +G+ NL +K   +S  +RR I+F+ SL+L
Sbjct: 779 SLTTIPEGTVVRSISQLDQALRDVRNAARIIGDTNLYQKMEESSRKIRRDIIFAASLFL 837


>gi|327266504|ref|XP_003218045.1| PREDICTED: helicase SKI2W-like [Anolis carolinensis]
          Length = 1273

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 348/955 (36%), Positives = 535/955 (56%), Gaps = 78/955 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA++ +   R +YTSP+K
Sbjct: 325  AFKWPFEPDVFQKQAILHLEKHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTVYTSPIK 384

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQK+R+    F DVGL+TGDV L P+ASCL+MTTEILR MLY GS+VL+++ WVIFD
Sbjct: 385  ALSNQKFRDFKNTFGDVGLLTGDVQLHPDASCLIMTTEILRSMLYNGSDVLRDLEWVIFD 444

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  +FA+WI  + ++  +V+ T  R
Sbjct: 445  EVHYINDSERGVVWEEVLIMLPDHVNIILLSATVPNTLEFADWIGRIKRKKIYVISTLKR 504

Query: 250  PTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
            P PL+HY++  G S      L+L+VD +  F    +    +   ++     +  G     
Sbjct: 505  PVPLEHYLY-TGNSQKTQNELFLLVDARGTFLTKGYYDAVEAKKERASKHSQTFGAKQPM 563

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             A  G G   +    ++ M+ ++   PV+ F+FSR  C+++A  ++ +D  T  EK  + 
Sbjct: 564  HAGAGPGQDKNIWLSLIDMLRKKDQLPVVAFTFSRNRCDENASMLTTVDLTTTTEKSEIH 623

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
              FQ  +  L   DR LP +  M+ LLKRGI VHHSG+LP++KE+VE+LF +GLVK LFA
Sbjct: 624  VFFQKCISRLKGTDRQLPQVLHMVDLLKRGIGVHHSGILPILKEVVEMLFSKGLVKILFA 683

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETFAMG+NMPA+TVVF +++K DG + R +   EYIQM+GRAGRRG D  G+ II+   
Sbjct: 684  TETFAMGVNMPARTVVFDSIRKHDGTNFRDLVPAEYIQMAGRAGRRGLDTTGMVIILCKN 743

Query: 485  QM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            Q+ EM  L  M+LGKP  L S FRL+Y  ILNL+ R E     E ++K SF +F   K  
Sbjct: 744  QVPEMADLHRMMLGKPTQLQSQFRLTYTMILNLL-RVEA-LRVEDMMKRSFSEFHTRKDS 801

Query: 544  PDIGKKVSKLEEEAASL---DASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
                 ++++L    A++   D +G+ +++ EY++   D+ ++ + +   +      L  L
Sbjct: 802  KAHEYRIAQLSSILANMEIPDTTGQLSDLEEYYRAVQDLQEIREFIQRRVMESLNGLKAL 861

Query: 600  GSGRLIKVREGGTDWGWGVVVNVV---------------KKPSAGVGTLPSRGGGYIVPV 644
              GR+I V         G+++ V                KKP        ++      P 
Sbjct: 862  SVGRVIVVNNQEHKNALGMILQVSSDAANRTFSTLVICEKKPPEEDKETDTQ-THLSSPS 920

Query: 645  QLPLISTLSKIRLSVP----------------------------------------PDLR 664
            ++PL + L + +L +P                                        P  R
Sbjct: 921  EVPLPNDLLRTKLFLPEGPCGHTIKKLGPSDIFGITTKTLRINAERILEDFKKRQIPRFR 980

Query: 665  PLDARQSILLAVQELESRFPQG----LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA- 719
                  S   A QEL  R  +G    LP L+P+ D++++D EVV+ V +   LE  L   
Sbjct: 981  NDPPGPSAATATQEL-LRLAEGDPEGLPFLDPINDLQLKDLEVVESVIKTRHLEEILLGF 1039

Query: 720  HPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD 779
              ++  +   +   F+ +  V  E+++L+  + D  +     E   R  VL+ LG+I+ +
Sbjct: 1040 QCVHSPRFHVEFVRFRERQRVLEELEKLRFLLSDQSLLL-LPEYHQRVEVLRSLGYINEN 1098

Query: 780  GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME 839
            G V+LKG  A  I +  ELL+T+L+ +    DL   ++ AL SC +   ++ E+  L   
Sbjct: 1099 GAVELKGSVARQI-SNHELLLTQLLLDNALTDLRPEEIVALLSCTVCQVRTQEEPQLPSV 1157

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            L K ++ ++  A +IA +Q +C L+ +V+++VE   +  L++V+Y W++G  FAE+ ++T
Sbjct: 1158 LQKGIEHIRSVAEEIALLQRKCGLQESVEDFVEQ-YKFGLVEVVYEWARGMPFAEIARLT 1216

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            D+ EG I+R  +RLDE   ++R AA+  GE  L  K  AAS  ++R I+F+ SLY
Sbjct: 1217 DVQEGIIVRCIQRLDETCREMRNAARVTGEPTLHAKMEAASNMIKRDIVFAASLY 1271


>gi|296197760|ref|XP_002746412.1| PREDICTED: helicase SKI2W isoform 1 [Callithrix jacchus]
          Length = 1246

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 352/959 (36%), Positives = 519/959 (54%), Gaps = 98/959 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  L
Sbjct: 784  QALAELTKRLGALEEP----DVTGQLLDLPEYYSWGEELTETQHMIQRHIMESVNGLKSL 839

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             +  G   P ++P  
Sbjct: 840  SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSKDPQDRGPATP-EVPYP 898

Query: 650  STLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVKDM 696
              L   +L +P          L+P D  A  + +L V     LE    +  PK       
Sbjct: 899  DDLVGFKLFLPEGRCDHTVIKLQPGDVAAITTKVLRVNGEKILEDFSKRQQPKFK----- 953

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIRC 733
              +DP +  +   ++EL     AHP                       L   + E  IR 
Sbjct: 954  --KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIRG 1011

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHIDA 778
             Q         Q LK + R  QIQK  + L+                R  VL+ LG++D 
Sbjct: 1012 AQCVHSPRFPAQYLKLRER-RQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDE 1070

Query: 779  DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQIN 835
             G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N
Sbjct: 1071 AGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN 1129

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
                L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+
Sbjct: 1130 ---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSEL 1185

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
              ++   EG I+R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1186 AGLSGTPEGLIVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|47208140|emb|CAF92300.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1120

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 350/955 (36%), Positives = 524/955 (54%), Gaps = 77/955 (8%)

Query: 62   NPVYNGE---MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
            NP + G        + FELD FQ+ ++  LE ++SV V+AHTSAGKT VAEYAIA++ + 
Sbjct: 180  NPAFQGSSLIFFCYWPFELDVFQKQAILRLEDHDSVFVAAHTSAGKTVVAEYAIALSQKH 239

Query: 119  KQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE 178
              R IYTSP+KALSNQK+R+    F DVGL+TGDV +SP +SCL+MTTEILR MLY GSE
Sbjct: 240  MTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQISPESSCLIMTTEILRSMLYNGSE 299

Query: 179  VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK 238
            V++++ WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K
Sbjct: 300  VIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKK 359

Query: 239  QPCHVVYTDFRPTPLQHYVFPVGGSG----LYLVVDEKEQFREDNFVKLQDTFLKQKIGG 294
            +  +V+ T  RP PL+HY++    S     ++L+VD    F    +    D   K++   
Sbjct: 360  RHIYVISTMKRPVPLEHYLYTGNSSKTQKEMFLLVDAAGNFLNKAYYAAVDA--KKERSS 417

Query: 295  RRENGKASGRMAKGGSGSGGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD 353
            +      +   ++  + S    ++  ++  +  R+  PV+ F+FSR  C+++A S+  +D
Sbjct: 418  KHSQSFGTKNTSQNTTASQDRAVWLTLLHYLSARQQTPVVAFTFSRTRCDENARSLDSMD 477

Query: 354  FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
              T  EK  +   FQ ++  L   DR LP I LM  LLKRGIAVHHSG+LP++KE+ E+L
Sbjct: 478  LTTSIEKAEIHSFFQKSLSRLRGGDRQLPQILLMRDLLKRGIAVHHSGILPILKEVTEML 537

Query: 414  FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
            F  GLVK LFATETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D
Sbjct: 538  FSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLD 597

Query: 474  DRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
              G  II+    + EM  L  M++GKP  L S FRL+Y  ILNL+ R E       +++ 
Sbjct: 598  ATGTVIILCKAGVQEMADLHVMMMGKPTVLHSQFRLTYTMILNLL-RVEA-LRVTDMMRR 655

Query: 533  SFHQFQ-----YEKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLM 586
            SF +       +EK++  +  K+S L     SLD  G+ +++  Y+    ++    + L 
Sbjct: 656  SFSESHRDTQAHEKSISQLKNKLSSL----PSLDTEGQLSDLTAYYHTVTELRTTSETLR 711

Query: 587  SEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV---------------KKPSAGVG 631
              I      L  L  GR++ V         GV++ V                K    G G
Sbjct: 712  HAILESVNGLKALSVGRVVVVNNKQHLNALGVILQVSSDAVNRTFTALIICEKGNEEGEG 771

Query: 632  T-------------LPSRGGGYIV-PVQLPLISTLSKIRLSVPPDLRPLDAR-------- 669
                          +P     + V  ++L  IS+++   L V PD R +D          
Sbjct: 772  NSDAFPHLFNTALFIPEGPCSHTVQKLKLEDISSITVKTLRVIPD-RIIDNYNKRQQPRF 830

Query: 670  ------QSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAH 720
                  Q+I  A QE   L    P GL  L+PV D++++  +VV    ++  L   L   
Sbjct: 831  RLDPPGQAISTATQELLRLAEANPGGLASLDPVNDLQLKSIDVVQASMRLRVLRDSLKEF 890

Query: 721  P-LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD 779
              ++  +   Q    + +  +  E+ +L+  + D  +     E   R +VL+ L +ID+ 
Sbjct: 891  TCIHSPRFPEQFAQVKERMSMQEELNRLQFLVSDQSLL-LLPEYHQRIQVLQHLQYIDSG 949

Query: 780  GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME 839
            G VQLKGR AC I + + LL   L  N   + L   + AAL SC +    +  + ++   
Sbjct: 950  GAVQLKGRVACQISSHELLLTELLFEN-ILSPLAPEESAALLSCLVFTQNAQVEPHITHT 1008

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            L + + Q+   A++I E+Q +C +    +E+V    +  L +V+YCW++G       Q+T
Sbjct: 1009 LQEGINQVLAVAQRIGELQRDCGIPQTAEEFV-GQFKFGLTEVVYCWARG---MRSHQLT 1064

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            D+ EG+++RS +RLDE L ++R AA+ VG+  L  K   AS ++RR I+F+ SLY
Sbjct: 1065 DVQEGTVVRSIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLY 1119


>gi|449551357|gb|EMD42321.1| hypothetical protein CERSUDRAFT_90937 [Ceriporiopsis subvermispora B]
          Length = 1238

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 361/1020 (35%), Positives = 539/1020 (52%), Gaps = 114/1020 (11%)

Query: 35   TRSCVHEVAVP----SGYALTKDEAIHGTFANPVYN-----GEMAKTYSFELDPFQRVSV 85
            TRS +  V  P    S +   +D A       P++N      EMA  Y FELD FQ+ +V
Sbjct: 234  TRSHLKPVKPPRTLRSAHVHKRDWAHEIDINKPMHNFHELVPEMAHKYPFELDTFQKQAV 293

Query: 86   ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
              LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALSNQKYR+  Q F  
Sbjct: 294  YHLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSPIKALSNQKYRDFKQTFSS 353

Query: 146  --VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
              VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +VIFDE+HY+ D ERGVVW
Sbjct: 354  SSVGILTGDVQINPEANCLIMTTEILRSMLYKGADLIRDVEFVIFDEVHYVNDAERGVVW 413

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ T  RP PL+HY++   G 
Sbjct: 414  EEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVISTPKRPVPLEHYLY--AGR 471

Query: 264  GLYLVVDEKEQFREDNFVKLQDTFLK--------------QKIGGRR---ENGKASGRMA 306
             L+ +VD +  F    +    +   +              Q++G R    + G   G  A
Sbjct: 472  DLHKIVDAERNFIGTGYKDAGEALRRKQDKEREAAGLPPVQRMGARAAAPQRGGRGGPQA 531

Query: 307  KGGSGSGGS--------------------DIF-KIVKMIMERKFQPVIVFSFSRRECEQH 345
            +GG  SG S                    ++F  ++  + +R   PV++F+FS++ CE++
Sbjct: 532  RGGQRSGASARGAPVGRGGSPRTFHQPDKNLFVHLLGNLRKRSLLPVVIFTFSKKRCEEN 591

Query: 346  AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            A +++  D  T  EK  +    + A+  L   DR LP I  M  LL RGI VHH GLLP+
Sbjct: 592  AATLTNADLCTSVEKSEIHVAMEKALSRLKGSDRQLPQIRRMRDLLSRGIGVHHGGLLPI 651

Query: 406  IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
            +KE+VE+LF  GLVK LFATETFAMG+NMPA+ VVF+ ++K DG S R I  GEY QM+G
Sbjct: 652  VKEVVEILFARGLVKVLFATETFAMGVNMPARCVVFSHIRKHDGKSFRDILPGEYTQMAG 711

Query: 466  RAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
            RAGRRG D  G  II+ ++++ E + L  M+LG P  L S FRL+Y  ILNL+ R E   
Sbjct: 712  RAGRRGLDATGTVIIVANDELPEQSVLNTMILGTPNKLQSQFRLTYNMILNLL-RVEA-L 769

Query: 525  TAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE-------AEVAEYHKLKLD 577
              E +IK SF +   +K LPD  +KV   EE   SL    E        ++  ++ +  D
Sbjct: 770  RVEEMIKRSFSENLSQKLLPDNQRKV---EEHEKSLRRYTELACDVCLPDIYRFYDISAD 826

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREG------GTDWGWGVVVNVVKK------ 625
            + +  +K+++   +  +    L  GRL+ +R+       G     G  V+ VK       
Sbjct: 827  VVEHNQKMLTLALKHPQGGRILAPGRLVILRDAHFRSNVGVLLKGGETVDNVKSFFVLVL 886

Query: 626  ------------------PSAGVGTLPSRGGGYIVP---VQLPL--ISTLSKIRLSVPPD 662
                              P   V   P+R     +     QLPL  I+ +++  + V  D
Sbjct: 887  VDHETKRKAGSSEDFGIPPRWPVDRYPTRYEDEEITYEVAQLPLTSITLVTERTIKVDTD 946

Query: 663  LRPLDARQSILLAVQELESRF------PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
                  R S + +   L S         Q +P+   V   K+   E  + +   +EL  K
Sbjct: 947  TLFYGRRMSQMESTVRLLSAILGHWLADQKIPE---VDWNKVRSLEFQENLRARDELSKK 1003

Query: 717  LFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGH 775
            L      +  D E        K  +   I +L+  + D  ++   D  + R  VLK L  
Sbjct: 1004 LPEFTCTQCLDFEEHYVIAHGKCMLEANIAELRRTISDQNLELLPD-YEQRIDVLKDLKF 1062

Query: 776  IDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN 835
            ID +  V LKGR AC I++ +EL++TEL+   T    +  +V AL SCF+  +K+  +  
Sbjct: 1063 IDDNSTVLLKGRVACEINSANELVLTELILENTLAPYEPEEVVALLSCFVFQEKTEVEPQ 1122

Query: 836  LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
            +  +L + L+ +     ++  IQ+  K  V  DE+   T++  L++V+Y W+KG  F ++
Sbjct: 1123 IPPKLQEGLEAITAINERVGRIQDRHK--VPGDEF--RTLKSGLVEVVYEWAKGMPFEQI 1178

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             ++TD+ EG+I+R   RLDE   ++R AA+ +G+  L KK       ++R I+F+ SLY 
Sbjct: 1179 TELTDVAEGTIVRCITRLDETCREVRDAARVIGDAELFKKMEECQMKIKRDIVFAASLYF 1238


>gi|426352519|ref|XP_004043759.1| PREDICTED: helicase SKI2W isoform 2 [Gorilla gorilla gorilla]
          Length = 1053

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/962 (36%), Positives = 519/962 (53%), Gaps = 104/962 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 114  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 173

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 174  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 233

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 234  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 293

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 294  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 351

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 352  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 411

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 412  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 471

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 472  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 531

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 532  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 589

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 590  EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 645

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------------PSRGGGYIVPVQL 646
            L +GR++ V+        GV++ V    ++ V T               RG       ++
Sbjct: 646  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDAQDRGPAT---AEV 702

Query: 647  PLISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPV 693
            P    L   +L +P          L+P D  A  + +L V     LE    +  PK    
Sbjct: 703  PYPDDLVGFKLFLPEGPCDHTVVKLQPGDIAAITTKVLRVNGEKILEDFSKRQQPKFK-- 760

Query: 694  KDMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQ 730
                 +DP +  +   ++EL     AHP                       L   + E  
Sbjct: 761  -----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEEL 815

Query: 731  IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGH 775
            I+  Q         Q LK + R  QIQK  + L+                R  VL+ LG+
Sbjct: 816  IQGAQCVHSPRFPAQYLKLQER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGY 874

Query: 776  IDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSE 832
            +D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +
Sbjct: 875  VDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQ 933

Query: 833  QINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATF 892
              N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F
Sbjct: 934  LPN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPF 989

Query: 893  AEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNS 952
            +E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ S
Sbjct: 990  SELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAAS 1049

Query: 953  LY 954
            LY
Sbjct: 1050 LY 1051


>gi|358418375|ref|XP_003583920.1| PREDICTED: helicase SKI2W-like [Bos taurus]
 gi|359078682|ref|XP_003587743.1| PREDICTED: helicase SKI2W-like [Bos taurus]
          Length = 1246

 Score =  546 bits (1406), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 348/952 (36%), Positives = 512/952 (53%), Gaps = 84/952 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ KK+  LEE     + +G+  ++ EY+    ++ +   ++   I      L  L
Sbjct: 784  QALAELTKKLGALEEP----EVTGQLVDLPEYYSWGEELTETRSQIQHRIIESVNGLKSL 839

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             R  G   P  +P  
Sbjct: 840  SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTALVLCDKPVSEDPRERGPASP-DVPYP 898

Query: 650  STLSKIRLSVP--------PDLRPLDARQSILLAVQELES-RFPQGLPKLNPVKDMKIED 700
              L   +L +P          L+P D   +I   V  L   +  +   K    K  K  D
Sbjct: 899  DDLVGFKLFLPEGPCDHTVAKLQPGDV-AAITTKVLRLNGDKILEDFSKRQQPKFKK--D 955

Query: 701  PEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIRCFQRK 737
            P    +   ++EL     AHP                       L   + E  IR  Q  
Sbjct: 956  PPSAAVTTAVQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCV 1015

Query: 738  AEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHIDADGVV 782
                   Q LK + R  QIQK  + L+                R  VL+ LG++D  G V
Sbjct: 1016 HSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTV 1074

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            +L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L +
Sbjct: 1075 KLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQ 1133

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
             +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   
Sbjct: 1134 GVERVRTVAKRIGEVQAACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTP 1192

Query: 903  EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1193 EGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|358420572|ref|XP_003584660.1| PREDICTED: helicase SKI2W-like [Bos taurus]
          Length = 1246

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 345/951 (36%), Positives = 510/951 (53%), Gaps = 82/951 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ KK+  LEE     + +G+  ++ EY+    ++ +   ++   I      L  L
Sbjct: 784  QALAELTKKLGALEEP----EVTGQLVDLPEYYSWGEELTETRSQIQHRIIESVNGLKSL 839

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             R  G   P  +P  
Sbjct: 840  SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTALVLCDKPVSEDPRERGPASP-DVPYP 898

Query: 650  STLSKIRLSVP--------PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
              L   +L +P          L+P D        ++    +  +   K    K  K  DP
Sbjct: 899  DDLVGFKLFLPEGPCDHTVAKLQPGDVAAITTKVLRLNGDKILEDFSKRQQPKFKK--DP 956

Query: 702  EVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIRCFQRKA 738
                +   ++EL     AHP                       L   + E  IR  Q   
Sbjct: 957  PSAAVTTAVQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVH 1016

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHIDADGVVQ 783
                  Q LK + R  QIQK  + L+                R  VL+ LG++D  G V+
Sbjct: 1017 SPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVDEAGTVK 1075

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + 
Sbjct: 1076 LAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQG 1134

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   E
Sbjct: 1135 VERVRTVAKRIGEVQAACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPE 1193

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1194 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|410213924|gb|JAA04181.1| superkiller viralicidic activity 2-like [Pan troglodytes]
 gi|410249634|gb|JAA12784.1| superkiller viralicidic activity 2-like [Pan troglodytes]
 gi|410290134|gb|JAA23667.1| superkiller viralicidic activity 2-like [Pan troglodytes]
 gi|410347543|gb|JAA40743.1| superkiller viralicidic activity 2-like [Pan troglodytes]
          Length = 1246

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 353/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVAYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|156375784|ref|XP_001630259.1| predicted protein [Nematostella vectensis]
 gi|156217276|gb|EDO38196.1| predicted protein [Nematostella vectensis]
          Length = 950

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 345/957 (36%), Positives = 523/957 (54%), Gaps = 95/957 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FE D FQ+ ++  LE ++SV V+AHTSAGKTAVAEYAIA+A + + R IYTSP
Sbjct: 17  DMAHKWDFEPDTFQKQAILRLEAHDSVFVAAHTSAGKTAVAEYAIALAHQHRTRTIYTSP 76

Query: 128 LKALSNQKYRELHQEFK------DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           +KALSNQK+R+  +         D+GL+TGDV + P ASCL+MTTEILR MLY GS+V++
Sbjct: 77  IKALSNQKFRDFKKTLSVDHPGLDIGLLTGDVQIKPEASCLIMTTEILRSMLYNGSDVIR 136

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           +V WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  +FA+WI    ++  
Sbjct: 137 DVEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNTLEFADWIGRTKRKKI 196

Query: 242 HVVYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
           +V+ T  RP PL+H+++  G S      L+L+VD+  +F    +    D   ++   G+ 
Sbjct: 197 YVISTAKRPVPLEHFLY-TGNSNKTSNELFLLVDQHSKFLTRGYQAAIDAKKERASKGKD 255

Query: 297 ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
             G A G        +  S    ++ M+ ++   PV+ F+FSRR+CE++A  +S L+  T
Sbjct: 256 AYG-AKGARTNYNPKADRSVWLSLITMLEKKDKLPVVAFTFSRRKCEENADQLSNLNLTT 314

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
             E+  +    Q  +  L   D+ LP +  M  LL+RGI VHHSG+LP++KE++E+LFQE
Sbjct: 315 SVERSRIHVEMQKYLARLKGSDKTLPQVTRMQELLQRGIGVHHSGILPILKEMIEILFQE 374

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVK L+ATETFAMG+NMPA+TVVF + +K DG S R +  GEY+QM+GRAGRRGKD  G
Sbjct: 375 GLVKLLYATETFAMGVNMPARTVVFDSTRKNDGSSFRDLLPGEYVQMAGRAGRRGKDTTG 434

Query: 477 ICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
             II+    + E + L  M+LGKP  LVS FRL+Y  ILNL+ R E Q   E ++K SF 
Sbjct: 435 TVIILCKGDVPEASDLHKMMLGKPTTLVSQFRLTYSMILNLL-RVE-QLRVEDMMKRSFS 492

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLD-----ASGEAEVAEYHKLKLDIAQLEKKLMSEIT 590
           +F  ++   +  +K  +LE+E A +        GE ++  Y++   +++ L  ++ +   
Sbjct: 493 EFHLQRDATERRQKAEQLEKELADVRDVECVLCGE-DLKSYYQACSELSDLTHRVKAAAL 551

Query: 591 RPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV----------KKPSAGVGTLPS----- 635
                   L  GR++ +          V++ V+          +KP   V T  S     
Sbjct: 552 SSPHGQKALLPGRIVVLDTVEHKNALAVILQVLVLCEEEASDSEKPQEIVSTQSSAASLQ 611

Query: 636 ------------RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQ------------- 670
                       R    +V V    IS ++  ++ +  D    D R+             
Sbjct: 612 PYLARSLFRPEGRSAHRVVQVLGSEISEITVRQMKIDGDAISQDFRKRMQPRFRNDPPCR 671

Query: 671 SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL---------- 717
           S + A QE   L    P+G+  ++PVKD  I D ++VD + +   L+  +          
Sbjct: 672 SAIAAEQELLRLTEANPEGIETMDPVKDFNIRDLDMVDAITRQRSLQEIMRTFTCINCPN 731

Query: 718 FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
           F    ++ +DE  +R           +  LK  + D  +Q    E   R  VL+KL +ID
Sbjct: 732 FYEHFSQVRDEMVLR---------QNLDHLKFLLSDQSLQL-LPEYHQRIEVLRKLRYID 781

Query: 778 ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
               V+LKGR AC + +  EL++TEL+F+  F  L H ++ AL SCF+   ++  +  L 
Sbjct: 782 RTNRVELKGRVACEM-SNHELMITELVFHSAFTGLQHTEIVALLSCFVFQQRNCSEPKLT 840

Query: 838 MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
             L +  +++   A  IA  Q EC L    D+Y +      L++ +Y W++G  FAE+  
Sbjct: 841 SVLEEGKERILSIAEAIANCQLECGLNTPADDY-KGQFYFGLVEAVYEWARGMPFAEITT 899

Query: 898 MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
           +TD+ EG I+R  +RL   L         +G+  L +K   AS +++R I+F+ SLY
Sbjct: 900 LTDVQEGVIVRCIQRLYSPL--------IIGDPTLYQKMEKASTAVKRDIVFATSLY 948


>gi|397523107|ref|XP_003831583.1| PREDICTED: LOW QUALITY PROTEIN: helicase SKI2W [Pan paniscus]
          Length = 1246

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 353/961 (36%), Positives = 517/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVAYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP    +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPXAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|194386298|dbj|BAG59713.1| unnamed protein product [Homo sapiens]
          Length = 1088

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 149  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 208

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 209  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 268

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 269  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 328

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 329  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 386

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 387  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 446

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 447  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 506

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 507  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 566

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 567  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 624

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 625  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 680

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 681  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 740

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 741  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 795

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 796  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 851

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 852  QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 910

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 911  DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 969

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 970  PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1025

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1026 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1085

Query: 954  Y 954
            Y
Sbjct: 1086 Y 1086


>gi|67782311|ref|NP_008860.4| helicase SKI2W [Homo sapiens]
 gi|313104288|sp|Q15477.3|SKIV2_HUMAN RecName: Full=Helicase SKI2W; Short=Ski2; AltName: Full=Helicase-like
            protein; Short=HLP
          Length = 1246

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|1403336|emb|CAA67024.1| SKI2W protein [Homo sapiens]
 gi|119623962|gb|EAX03557.1| superkiller viralicidic activity 2-like (S. cerevisiae), isoform
            CRA_c [Homo sapiens]
          Length = 1246

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|7671650|emb|CAB89307.1| dJ34F7.7 (superkiller viralicidic activity 2 (S. cerevisiae
            homolog)-like (SKI2W)) [Homo sapiens]
          Length = 1245

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 306  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 365

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 366  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 425

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 426  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 485

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 486  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 543

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 544  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 603

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 604  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 663

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 664  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 723

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 724  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 781

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 782  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 837

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 838  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 897

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 898  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 952

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 953  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1008

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1009 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1067

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1068 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1126

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1127 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1182

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1183 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1242

Query: 954  Y 954
            Y
Sbjct: 1243 Y 1243


>gi|3395783|gb|AAC78607.1| putative RNA helicase Ski2w [Homo sapiens]
          Length = 1246

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C+L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACRLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIGFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|332823595|ref|XP_003311222.1| PREDICTED: helicase SKI2W [Pan troglodytes]
          Length = 1053

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 354/961 (36%), Positives = 521/961 (54%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 114  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 173

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 174  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 233

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 234  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 293

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 294  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 351

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 352  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 411

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 412  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 471

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 472  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 531

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 532  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 589

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 590  EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 645

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 646  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVAYP 705

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 706  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 760

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----LNKSQD---------ENQIRCFQ----- 735
                +DP +  +   ++EL     AHP     L+   D         E  +R  +     
Sbjct: 761  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 816

Query: 736  RKAEVNHE----IQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            + A+  H      Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 817  QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 875

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L    + AL S   C  P D   + 
Sbjct: 876  DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEDIVALLSGLVCQSPGDAGDQL 934

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 935  PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 990

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 991  ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1050

Query: 954  Y 954
            Y
Sbjct: 1051 Y 1051


>gi|4379045|emb|CAA88733.1| helicase [Homo sapiens]
          Length = 1246

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLQMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLFPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|157928370|gb|ABW03481.1| superkiller viralicidic activity 2-like (S. cerevisiae) [synthetic
            construct]
          Length = 1246

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEVGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|16041755|gb|AAH15758.1| Superkiller viralicidic activity 2-like (S. cerevisiae) [Homo
            sapiens]
 gi|123982544|gb|ABM83013.1| superkiller viralicidic activity 2-like (S. cerevisiae) [synthetic
            construct]
          Length = 1246

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEVGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|2347134|gb|AAB67978.1| helicase [Homo sapiens]
          Length = 1246

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTMVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEVGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|402468581|gb|EJW03718.1| hypothetical protein EDEG_01987 [Edhazardia aedis USNM 41457]
          Length = 970

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 340/925 (36%), Positives = 518/925 (56%), Gaps = 97/925 (10%)

Query: 64  VYNGEM-AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRV 122
           +YNG +  K Y FELD FQ++SVA ++RNE++L+SAHTSAGKT VAEYAIA    + QR 
Sbjct: 60  MYNGTIFKKEYPFELDTFQKLSVAAIDRNENLLISAHTSAGKTVVAEYAIAHCALNNQRC 119

Query: 123 IYTSPLKALSNQKYRELH---QEFK-----DVGLMTGDVTLSPNASCLVMTTEILRGMLY 174
           IYTSP+KALSNQK+REL      F       VGLMTGDVT++PNAS LVMTTEILR MLY
Sbjct: 120 IYTSPIKALSNQKFRELSIYASSFPTVISPSVGLMTGDVTINPNASILVMTTEILRNMLY 179

Query: 175 RGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWIC 234
           +G+ +LKEV +VIFDEIHY+KD ERGVVWEE+II  P   + VFLSAT+ NA +FA+W+ 
Sbjct: 180 KGNTMLKEVNYVIFDEIHYLKDAERGVVWEEAIILSPSHFRFVFLSATIPNADEFAKWVV 239

Query: 235 HLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--QKI 292
            + K  CHV+ TD RPTPL+H+++    +   +V  EK  + +      +  FL   + +
Sbjct: 240 SISKVCCHVIGTDKRPTPLEHFLW----NSTKMVSPEKTTYFD------KKVFLSAIKNV 289

Query: 293 GGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKL 352
             R+               +  +D+  ++  +  +   P IVFSFSR+ECE++A+++   
Sbjct: 290 SNRKR--------------TEENDVKNLIMHVSSQGLLPCIVFSFSRKECERYALTLQD- 334

Query: 353 DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
            F    +K+ +  +F  A+  L +E++NL  I+ +LP+L+RG+ +HH+GLLP+IKE+VE+
Sbjct: 335 GFTDDNQKEKITLIFNAAIANLRDEEKNLDLIQSILPMLQRGVGIHHAGLLPIIKEIVEI 394

Query: 413 LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
           LFQE L+  LFATETFA+GLNMPAK VVFT++KK+DG+S R + SGEYIQMSGRAGRR  
Sbjct: 395 LFQENLLFVLFATETFAIGLNMPAKCVVFTSLKKFDGESKRLVSSGEYIQMSGRAGRRNL 454

Query: 473 DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
           D +GI   +++E + +     +  G+   L S F+LSY  ILNLM   +       +IK 
Sbjct: 455 DTKGIVFSLMNEYITLKKAVKLFSGQADKLSSAFKLSYNMILNLMRIVD--VDPVFLIKR 512

Query: 533 SFHQFQYEKALPDIGKKVSKLEEEA----ASLDASGEAEVAE----YHKLKLDIAQLEKK 584
           SF  FQ +  L +   K+ K++ +      ++D     E+      Y KL+L   ++  K
Sbjct: 513 SFFYFQSQNNLEETYYKIEKMKNDVKISKKNIDDLSPYEIQNILKGYGKLRLKRNKIACK 572

Query: 585 LMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPV 644
             ++          L + R++ +        + +   +++K S               P+
Sbjct: 573 FYNKQN-------CLENDRVVDIFINNDGNFYTIRKCIIRKHSKDTNADAQSAKTNAKPI 625

Query: 645 QLPLISTLSKIRLSVPPDLRPLDARQSI-LLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
            +      ++   SV  D   +DA   + ++ ++ L     + + KL  + D+      +
Sbjct: 626 GVVYFDKCTQF-FSV--DYENIDAVYDLRVMNLKALNESAKRKVDKL-YLDDVIKNYDYL 681

Query: 704 VDLVNQIEE---LEH---------KLFAHPLNKSQDENQ-IRCFQRKAEVNHEIQQLKS- 749
           V  +N+ +E   ++H         K F     +S DEN  I   Q++  ++ ++Q  K  
Sbjct: 682 VKFLNKFDEETAIKHEKNSLNSLSKNFDKEFCESSDENNIINKKQKEKAISDDLQTNKYY 741

Query: 750 ------KMRDSQIQKFRDEL---------------KNRSRVLKKLGHIDADGVVQLKGRA 788
                  + D+ I+ ++D L               K   +VL++L + D    + +KGR 
Sbjct: 742 QILHNLHLEDTFIRIYQDNLNQYINLTNIYHLSECKKMMQVLRRLAYYDKS--ITIKGRV 799

Query: 789 ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 848
           AC I T DEL++TEL+FNG F  +D  +  AL SC I  +  +E   +  +  +    L 
Sbjct: 800 ACEISTADELILTELIFNGKFLKMDIDEAVALLSCLIFHEFDNES-TINEKNKQNYNTLT 858

Query: 849 ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
           +  +K+  +  EC +E+   + ++      +MD+   W  G +F E+  M+ IFEGSIIR
Sbjct: 859 DIIKKLVAVMTECGIEIKETDLLKKYSWE-MMDIAMAWVNGKSFIEICSMSKIFEGSIIR 917

Query: 909 SARRLDEFLNQLRAAAQAVGEVNLE 933
           + RRL+E L QL AAA+ +G  +LE
Sbjct: 918 AFRRLEELLKQLCAAAREIGNNDLE 942


>gi|1754827|gb|AAB52523.1| helicase-like protein [Homo sapiens]
          Length = 1245

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 351/961 (36%), Positives = 518/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KAL+
Sbjct: 306  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALT 365

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 366  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 425

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 426  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 485

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 486  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 543

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 544  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 603

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 604  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 663

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 664  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 723

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 724  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 781

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 782  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 837

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 838  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 897

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 898  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 952

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 953  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1008

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1009 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1067

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1068 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1126

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1127 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1182

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1183 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1242

Query: 954  Y 954
            Y
Sbjct: 1243 Y 1243


>gi|255950278|ref|XP_002565906.1| Pc22g20040 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592923|emb|CAP99292.1| Pc22g20040 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1265

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 348/968 (35%), Positives = 517/968 (53%), Gaps = 96/968 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 314  EMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 373

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+   EF DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 374  IKALSNQKYRDFRAEFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 433

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D+ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 434  FDEVHYVNDQERGVVWEEVIIMLPEHVTLILLSATVPNTREFASWVGRTKKKDIYVISTH 493

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL--KQKIGGRRE-------- 297
             RP PL+HY++   G   + +VD  ++F E  + K  D  L  + K+   +E        
Sbjct: 494  KRPVPLEHYLW--AGKSKHKIVDSNKRFLETGW-KAADDILSGRDKLKAMKEAEAQAQSA 550

Query: 298  ---------NGKASGRMAKGGSGSGGSD----IFKIVKMIMERKFQPVIVFSFSRRECEQ 344
                      G+   R  +GG  +  +        +V  + +    P  VF FS++ CE+
Sbjct: 551  QARAPAPQGRGRNIARTGRGGGRTSAAQDKNTWVHLVSHLRKEDLLPGCVFVFSKKRCEE 610

Query: 345  HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLP 404
            +A S+S  DF+   EK       + A+  L  EDR LP I  +  LL RGIAVHH GLLP
Sbjct: 611  NADSLSSQDFSNSTEKSLTHMFIEKALTRLKPEDRTLPQILRLRELLSRGIAVHHGGLLP 670

Query: 405  VIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMS 464
            ++KE+VE+LF + LVK LFATETFAMGLN+P +TVVF+  +K DG + R +  GEY QM+
Sbjct: 671  IVKEVVEILFAKSLVKVLFATETFAMGLNLPTRTVVFSGFRKHDGKAFRDLLPGEYTQMA 730

Query: 465  GRAGRRGKDDRGICIIMV---DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
            GRAGRRG D+ G  I+     DE     +LK M+LG+P  L S FRL+Y+ ILNL+ R E
Sbjct: 731  GRAGRRGLDNVGYVIVTSSGRDEAPSAASLKQMILGEPTKLRSQFRLTYHMILNLL-RVE 789

Query: 522  GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKLKLD 577
                 E +IK SF +   +  LP+  K+V   E   A +  +     + ++   H   ++
Sbjct: 790  A-LKIEEMIKRSFSENATQALLPEQEKQVQVSEASLAKIKRAPCEICDLDLVACHDAAME 848

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG-------- 629
              +L  +  +E+          G  RL+  R+ G      +  + V     G        
Sbjct: 849  YRKLTSQFYAELLSSPVGKRLFGVKRLVVYRKDGLRTAGVITRDGVSAGVVGAVPCIQVL 908

Query: 630  -VGTLPS-RGGGYIVPVQLPLIST---------------LSKIRLSVPPDL--------R 664
             +GTL S R    I+P  LPL                  + KIRLS    L        +
Sbjct: 909  EIGTLSSKRHPTDILPF-LPLFRPYFQPLPNRVEKMSLRICKIRLSDVECLTNTLVKMTK 967

Query: 665  PLDARQSILLAVQELESRFPQGL-----PKLNPVKDMKIEDPEVVDLVNQIEE------- 712
            P+        AVQ  E   PQ            +   +I++ E+ D++++ +        
Sbjct: 968  PIWYLNIKKEAVQWAEKELPQYTNSWINAAWEEIDWQRIKEMEIRDILDKRQAQAEISQS 1027

Query: 713  ---LEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
               L+   FA       DE Q++           I +LK  M D  +Q   D  + R  V
Sbjct: 1028 CTCLQCPNFADHFEMQHDEWQVK---------ESISELKQLMSDQNLQLLPD-YEQRILV 1077

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            LK+LG +D    VQLKG+ AC I + DEL++TEL+      + +  ++ AL S F+  +K
Sbjct: 1078 LKELGFVDEQSRVQLKGKVACEIHSADELVLTELVLENVLAEFEPEEIVALLSAFVFQEK 1137

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF--LMDVIYCWS 887
            +     L   L K  +++   A ++ + Q   ++  + ++  +   +P   L +V+Y W+
Sbjct: 1138 TESTPTLTPRLEKGQKEIIRIAERVNDFQILHQVIQSSEDANDFASKPRFGLAEVVYEWA 1197

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            KG +F  +  +TD+ EG+I+R   RLDE   +++ AA+ VG+ NL  K   A E ++R +
Sbjct: 1198 KGMSFNRITDLTDVMEGTIVRVITRLDETCREVKNAAKLVGDPNLYTKMQQAQELIKRDV 1257

Query: 948  MFSNSLYL 955
            +F+ SLY+
Sbjct: 1258 IFAASLYM 1265


>gi|332823591|ref|XP_001160927.2| PREDICTED: helicase SKI2W isoform 3 [Pan troglodytes]
          Length = 1246

 Score =  543 bits (1399), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 352/961 (36%), Positives = 516/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVAYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L    + AL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEDIVALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 1183

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 1184 ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1243

Query: 954  Y 954
            Y
Sbjct: 1244 Y 1244


>gi|431921548|gb|ELK18902.1| Helicase SKI2W [Pteropus alecto]
          Length = 1246

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 346/957 (36%), Positives = 516/957 (53%), Gaps = 94/957 (9%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    D   K+++    +   A      G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGTFHTKGYYAAVDA-KKERMSKHAQTFGAKQPTHHG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQDRGVYLSLLAFLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHIFLQ 605

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606  RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726  MVDLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            ++L ++ KK+  LEE     D +G+  ++ EY++   ++ +    +   +      L  L
Sbjct: 784  QSLAELTKKLGALEEP----DVTGQLVDLLEYYRWGEELTETRSLIQRRVLESVNGLKSL 839

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLPL 648
             +GR++ V+        GV++ V     + V T            P   G     V  P 
Sbjct: 840  SAGRVVVVKNQEHHNVLGVILQVSSNSMSRVFTTLVLCDKPTSEDPQERGSASPDVPYP- 898

Query: 649  ISTLSKIRLSVPP-------------DLRPLDARQSILLAVQELESRFPQGLPKLNPVKD 695
               L   +L +P              D+  +  +   +   + LE    + LPK      
Sbjct: 899  -DDLIGFKLFLPEGPCDHSVAKLQTGDVAAITTKVLRVNGEKILEDFSKRQLPKFK---- 953

Query: 696  MKIEDPEVVDLVNQIEELEHKLFAHP-----LNKSQD---------ENQIRCFQ-----R 736
               +DP +  +   ++EL     A+P     L+   D         E ++R  +     R
Sbjct: 954  ---KDPPIAAVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGELRARKLEELIR 1010

Query: 737  KAEVNHE----IQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHID 777
             A+  H      Q LK + R  QIQK  + L+                R  VL+ LG++D
Sbjct: 1011 GAQCVHSPRFPTQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRILGYVD 1069

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
              G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L 
Sbjct: 1070 EAGTVKLAGRVACAMSS-HELLLTELMFDNALSALQPEEIAALLSGLVCQSSGDTGEQLP 1128

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
              L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  
Sbjct: 1129 STLKQGVERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAG 1187

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1188 LSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|346319011|gb|EGX88613.1| DEAD/DEAH box RNA helicase Ski2, putative [Cordyceps militaris CM01]
          Length = 1207

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 341/949 (35%), Positives = 531/949 (55%), Gaps = 89/949 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 287  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 346

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+  + F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 347  IKALSNQKFRDFRETFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 406

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  I ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 407  FDEVHYVNDYERGVVWEEVIIMLPEHISLILLSATVPNTHEFASWVGRTKQKDIYVISTA 466

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
             RP PL+HYV+   G  ++ +VD  ++F E  +     TF       + ++         
Sbjct: 467  KRPVPLEHYVW--AGKDIHKIVDSDKKFIEKGWKDAHATF-------QSKDKPKGAETTV 517

Query: 308  GGSGSGGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
               G+   +++  +V+ +      P  +F FS++ CE++A ++S  DF T  EK  +  +
Sbjct: 518  ATRGAQDKNLWVHLVQYLKRNTLLPACIFVFSKKRCEENADALSNQDFCTASEKSHIHMI 577

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
             + ++  L  EDR LP I  +  LL RGIAVHH GLLP++KELVE+LF E LVK LFATE
Sbjct: 578  IEKSIARLKPEDRLLPQIIRLRELLGRGIAVHHGGLLPIVKELVEILFAETLVKVLFATE 637

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---D 483
            TFAMGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    D
Sbjct: 638  TFAMGLNLPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDKVGSVIIVPPGGD 697

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            +   +  L++M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ L
Sbjct: 698  DAPPVTDLRNMILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLL 755

Query: 544  PDIGKKV-------SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVL 596
            P+  K V        K++ E   +    E  V E H+   D  QL  +L        + L
Sbjct: 756  PEHEKDVKLAQADLDKVKREPCKI---CETVVDECHQAAQDFKQLTTELY-------KGL 805

Query: 597  YYLGSGRLIKVREGGTDWGW------GVVV-------NVVKKPS---AGVGTLPSRGGGY 640
              +  GR + V++    + W      G+++       + ++ P+     V  L  R  G 
Sbjct: 806  LKIPIGRRMFVQQRLIVFNWDGIRTVGILLADGASPRSTIEDPTVHVCAVKPLRDRRDGT 865

Query: 641  IVPVQLPLISTLSKIRLSVPPDLR---------PLD-----ARQSILLAVQELESRFPQG 686
             +   LP + T  K    +P   +         PL       R  +   V E+  R   G
Sbjct: 866  DL---LPFLPTYRKYLHKLPNGRKRMQTKTLHVPLSDVDCVTRWVLRGTVPEIMQRGEVG 922

Query: 687  LPKLNPVKDMKIEDPEVVDLVN-------QIEELEHKL--FAHPLNKSQDENQIRC--FQ 735
            L  L+ +++M +   +  D V+       Q++E+  K    A  ++ S     + C  F 
Sbjct: 923  LVALDKLQEMCVSWDDRWDEVDMAKIKSLQLQEIIEKRVQLAKAMSTSP---AMSCPSFL 979

Query: 736  RKAEVNHE-------IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
            +   + H+       IQQLK  + D  +Q   D  + R +VLK+LG ID    +QLKG+ 
Sbjct: 980  KHFAMCHDEWLIKEHIQQLKLSLSDQNLQLLPD-YEQRVQVLKELGFIDDATRIQLKGKV 1038

Query: 789  ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 848
            AC + +GDEL++TEL+ +    + D  ++AAL S F+  +K++ +  L   L +   ++ 
Sbjct: 1039 ACEVHSGDELVLTELILDNVLAEFDPAEIAALLSAFVFQEKTTIEPVLTGNLERGRDRIV 1098

Query: 849  ESARKIAEIQNECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSI 906
              + K+ ++Q   ++ ++ ++  +   RP   LM+V+Y W++G +F  +  +TD+ EG+I
Sbjct: 1099 AISEKVNDVQTRLQVILSSEDSNDFVSRPRFGLMEVVYEWARGMSFKNITGLTDVLEGTI 1158

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +R+  RLDE   +++ AA+ +G+ +L +K   A E ++R I    SLY+
Sbjct: 1159 VRTMTRLDETCREVKNAARIIGDPDLYQKMQQAQEMIKRDITAVASLYM 1207


>gi|358056951|dbj|GAA97301.1| hypothetical protein E5Q_03979 [Mixia osmundae IAM 14324]
          Length = 1184

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 342/971 (35%), Positives = 535/971 (55%), Gaps = 94/971 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MAK Y FELD FQ+ +V  LE+ +SV  +AHTSAGKT +AEYAIA+A +   R IYTSP
Sbjct: 225  DMAKEYPFELDTFQKEAVYHLEQGDSVFCAAHTSAGKTVLAEYAIALAQQHMTRAIYTSP 284

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+  Q F  ++VG++TGDV ++P ASCL+MTTEILR MLY+G++++++V W
Sbjct: 285  IKALSNQKFRDFKQVFGAENVGILTGDVQVNPEASCLIMTTEILRSMLYKGADLIRDVEW 344

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  I ++ LSAT+ N  +FA W+    ++  +V+ 
Sbjct: 345  VIFDEVHYVNDLERGVVWEEVIIMLPDHIGVILLSATVPNTKEFAGWVGRTKRKDIYVIS 404

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------- 297
            T  RP PL+H+++   G  L+ +VD    F    +   Q   LK+K    RE        
Sbjct: 405  TLKRPVPLEHFLY--AGRDLFKIVDSTGTFNGQGWKDAQQA-LKRKQEKEREAAGLPAPG 461

Query: 298  ----------------------NGKASGRMA-------KGGSGSGGSDIFKIVKMIMERK 328
                                   G +S R A       + G G+  +    +V  + +R 
Sbjct: 462  ARGRGARGGTRGVGIVQRGQALGGASSARPAALAPRPIRPGPGADRNLWVHLVGSLRQRD 521

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
              P ++F+FS++ CE++A+SM   D  T  EK  +  V + ++  L E DR LP I  + 
Sbjct: 522  LLPAVIFTFSKKRCEENALSMPNTDLCTATEKSEIHLVVERSLGRLQEIDRTLPQILKVR 581

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL +GI VHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPA+ VVF + +K D
Sbjct: 582  SLLSKGIGVHHGGLLPIVKEIVEILFARGLVKILFATETFAMGVNMPARCVVFASTRKHD 641

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ--MEMNTLKDMVLGKPAPLVSTF 506
            G + R + +GEY QM+GRAGRRG D  G  II+ +E    E + L  M+LG+P+ L S F
Sbjct: 642  GRTFRDLLAGEYTQMAGRAGRRGLDATGCVIIVCNEAEPPETSDLHKMILGQPSKLTSQF 701

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
            RL+Y  ILNL+ R E     E +IK SF +   +K LP+  +K+ + E++ ++L + G A
Sbjct: 702  RLTYSMILNLL-RVE-TLRVEEMIKRSFSENASQKLLPEQERKIIEGEKQLSALQSIGVA 759

Query: 567  ---EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV--- 620
                +  YH L + I +  ++L+   T+       L +GR++ + +   D    +++   
Sbjct: 760  IDDRLYLYHDLVMQIRRRNQELLRLATQSSS-FGALAAGRVVLLDDASFDTVPAIILGAS 818

Query: 621  --------NVVKKPSAGVGTLP--SRGGGYIVP-------------------VQLPLIST 651
                    ++  +P+  V  L   S  G   VP                   +QL  I  
Sbjct: 819  ARFVRDDGSIDPEPAFNVMALDDGSSNGAVSVPRWPLLAKTSSGHTTYRPLAIQLSSIGI 878

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN-PVKDM-----KIEDPEVVD 705
            +++ RL++PP        + IL    +L       + KL+ P  D+     K+   E+ D
Sbjct: 879  VTRFRLTLPPGAASDRPARRIL---DDLARDVQPTIAKLSQPGADVEFDWAKLRSFELRD 935

Query: 706  LVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK 764
             ++     EHKL +  +N  +    Q+     +  +   +  L+  + D  ++    E +
Sbjct: 936  TLDHRRASEHKLASLGVNIDEGTAAQLLRINERETLRMSLTNLRLALSDQNLELL-PEYE 994

Query: 765  NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
             R  VLK+LG ID    V LKGR AC I++G+ L++TEL+ + T    +  +V A+ S F
Sbjct: 995  GRISVLKRLGFIDLQATVLLKGRVACEINSGNALVLTELLLDNTLAVYEPAEVLAMLSAF 1054

Query: 825  IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
            +  +K+  +  L   L +    +   + +IA +++  + E + DE+  + +   L++V++
Sbjct: 1055 VFQEKTDIEPILTETLQEAKATILAISERIASVESSERAEYSADEF-GNKLYFGLVEVVH 1113

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W+ G  F +++ +TD+ EG+I+R+  RLDE   ++R AA+ +G+  L +K       LR
Sbjct: 1114 QWALGMPFEQIMLLTDVQEGTIVRAITRLDECCREVRDAARVIGDAELGRKMDVCRTLLR 1173

Query: 945  RGIMFSNSLYL 955
            R ++FS SLY+
Sbjct: 1174 RDVVFSVSLYI 1184


>gi|402866529|ref|XP_003897432.1| PREDICTED: helicase SKI2W isoform 1 [Papio anubis]
          Length = 1246

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 350/960 (36%), Positives = 518/960 (53%), Gaps = 100/960 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y    +RGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YTWSAQRGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 897

Query: 649  ISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVKD 695
               L   +L +P          L+P D  A  + +L V     LE    +  PK      
Sbjct: 898  PDDLVGFKLFLPEGPCEHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK---- 953

Query: 696  MKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIR 732
               +DP +  +   ++EL     AHP                       L   + E  IR
Sbjct: 954  ---KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIR 1010

Query: 733  CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHID 777
              Q         Q LK + R  QIQK  + L+                R  VL+ LG++D
Sbjct: 1011 GAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVD 1069

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQI 834
              G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  
Sbjct: 1070 EAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLP 1128

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
            N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E
Sbjct: 1129 N---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSE 1184

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1185 LAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|328856615|gb|EGG05735.1| hypothetical protein MELLADRAFT_36552 [Melampsora larici-populina
            98AG31]
          Length = 1274

 Score =  541 bits (1393), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 349/979 (35%), Positives = 526/979 (53%), Gaps = 116/979 (11%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            Y FELD FQ+ +V  LE  +SV ++AHTSAGKT VAEYAIA+A R   R IYTSP+KALS
Sbjct: 316  YPFELDTFQKEAVYHLEMGDSVFIAAHTSAGKTVVAEYAIALAARHMTRCIYTSPIKALS 375

Query: 133  NQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
            NQK+R+  Q F    VG++TGDV ++P+ SCL+MTTEILR MLY+G++++++V +V+FDE
Sbjct: 376  NQKFRDFKQTFDPDTVGILTGDVQVNPDGSCLIMTTEILRSMLYKGADLIRDVEFVVFDE 435

Query: 191  IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
            +HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ T  RP
Sbjct: 436  VHYINDSERGVVWEEVIIMLPDHVTIILLSATVPNTKEFADWVGRTKKKDIYVISTPKRP 495

Query: 251  TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR---------RENGKA 301
             PL+H+++      LY +++ K +F    FV   D   + ++  R         R    A
Sbjct: 496  VPLEHFLY--ANKDLYKILNAKGEFLGQGFV---DALKRAQVKEREAAGMLPLTRMGAAA 550

Query: 302  SGRMAKGGSGSGGSD-----------------------------------IFKIVKMIME 326
            S R  +GG+ S GS                                       +V ++ +
Sbjct: 551  SNRGQRGGAQSRGSRSNTSARGNTNLMARGGGRGGGGHNSGRGNQEDRNLWVHLVGLLKK 610

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
            +   PV+ F+FS+R CE +A SM   D  + +EK  +  + + ++  LN+ D+ LP I  
Sbjct: 611  QNLLPVVAFTFSKRRCEDNASSMPNTDLCSAKEKSEIHVIIERSLKRLNDSDKKLPQILR 670

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            M  +L RG+ VHH GLLP++KELVE+LF  GLVK LFATETFAMG+NMPA++VVF+ +KK
Sbjct: 671  MRDMLSRGVGVHHGGLLPIVKELVEILFTRGLVKVLFATETFAMGVNMPARSVVFSGIKK 730

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVST 505
             DG S R +  GEY QMSGRAGRRG D  G+ II+  D+  + +TL  M+LG+P  L S 
Sbjct: 731  HDGHSFRELLPGEYTQMSGRAGRRGLDSTGVVIIVCTDQPPDTSTLHKMLLGQPTKLQSQ 790

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
            FRL+Y  ILNL+ R E     E +IK SF +   ++ LPD  KK+ + E E  +L  S +
Sbjct: 791  FRLTYNMILNLL-RVEA-LRVEEMIKRSFSENAQQRLLPDQQKKIVECERELRALGISDD 848

Query: 566  AE----VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVN 621
             E    + EY  L   +  L   ++  I           SGRL+ +R+G   +   V++ 
Sbjct: 849  PERNENIKEYLGLMTRLEALNASMIESILSHPSGSRAFQSGRLVILRDGV--YNPAVILK 906

Query: 622  VVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRL--------SVPPDLRPLDARQSIL 673
            +             R   Y+V   +P     ++IR         SVPP   P    Q+  
Sbjct: 907  LAPGFHKSADGRIDRSRTYLVLAFVP-----TEIRAGTKDLPSESVPPRWPPRIHAQTED 961

Query: 674  LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF----AHPLNKSQDEN 729
            L  +   +  P     L     +K+ D E +   ++  E+E+ L     +  LN+  D N
Sbjct: 962  LTYE--LAVIPTSSVSLITKHLIKL-DAESIANHHRKSEMENTLKNFKESQLLNQLADTN 1018

Query: 730  QIRCFQRKAEVNHEIQQLKS-KMRD---------SQIQKFRD------------------ 761
             I+  Q   E+  E  +L+S   RD         + +  F D                  
Sbjct: 1019 IIQDIQ---EIEWESTKLRSVDFRDLLHERDTLLASLIAFGDIEQTEGLRMASSDQNLEL 1075

Query: 762  --ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
              + + R  VLK+L  ID    V LKGR AC I++  EL++TEL+ +  F D D  +  A
Sbjct: 1076 LPDYEARIAVLKELKFIDERSTVLLKGRVACEINSSSELILTELILDNVFMDYDPSETVA 1135

Query: 820  LASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF- 878
            L S  +  DK+  +  L   L +  QQL + + ++ E+    ++EV+  E   S+     
Sbjct: 1136 LLSALVFQDKTDNKPMLTPALEQGCQQLTKISERVEEVCLRHRVEVDDVEGPRSSHSGLN 1195

Query: 879  --LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
              ++++++ W++G  FAE++ ++DI EG+I+R+  RLDE   +++ AA+ +G+  L KK 
Sbjct: 1196 FGMVELVWHWAQGMPFAELVGLSDIQEGTIVRTMTRLDESCREVKDAARIIGDATLGKKM 1255

Query: 937  AAASESLRRGIMFSNSLYL 955
             A    +RR ++F +SLY+
Sbjct: 1256 EACQALIRRDVIFVSSLYI 1274


>gi|402866531|ref|XP_003897433.1| PREDICTED: helicase SKI2W isoform 2 [Papio anubis]
          Length = 1146

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 350/960 (36%), Positives = 518/960 (53%), Gaps = 100/960 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 207  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 266

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 267  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 326

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y    +RGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 327  YTWSAQRGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 386

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 387  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 444

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 445  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 504

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 505  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 564

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 565  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 624

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 625  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 682

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 683  EQALAELTKRLGALEEP----DMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVNGLKS 738

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPL 648
            L +GR++ V+        GV++ V    ++ V T             +  G   P ++P 
Sbjct: 739  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATP-EVPY 797

Query: 649  ISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVKD 695
               L   +L +P          L+P D  A  + +L V     LE    +  PK      
Sbjct: 798  PDDLVGFKLFLPEGPCEHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK---- 853

Query: 696  MKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIR 732
               +DP +  +   ++EL     AHP                       L   + E  IR
Sbjct: 854  ---KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIR 910

Query: 733  CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHID 777
              Q         Q LK + R  QIQK  + L+                R  VL+ LG++D
Sbjct: 911  GAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYVD 969

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQI 834
              G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  
Sbjct: 970  EAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLP 1028

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
            N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E
Sbjct: 1029 N---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSE 1084

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1085 LAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1144


>gi|194382646|dbj|BAG64493.1| unnamed protein product [Homo sapiens]
          Length = 1053

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 351/961 (36%), Positives = 517/961 (53%), Gaps = 102/961 (10%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 114  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 173

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++  VIFDE+H
Sbjct: 174  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLERVIFDEVH 233

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 234  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 293

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 294  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 351

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 352  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 411

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 412  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 471

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 472  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 531

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 532  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 589

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 590  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 645

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 646  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 705

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 706  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 760

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 761  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 816

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 817  QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 875

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 876  DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 934

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+
Sbjct: 935  PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFS 990

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SL
Sbjct: 991  ELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASL 1050

Query: 954  Y 954
            Y
Sbjct: 1051 Y 1051


>gi|195175249|ref|XP_002028370.1| GL15456 [Drosophila persimilis]
 gi|194117959|gb|EDW40002.1| GL15456 [Drosophila persimilis]
          Length = 760

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 308/727 (42%), Positives = 419/727 (57%), Gaps = 117/727 (16%)

Query: 16  DLHVTGTPEEESTKKQRNL---TRSCVHEVAVPSGYALTKDEAIHGTFANPV--YNGEMA 70
           D+  +GT E  +T+   +L     SC HEVA     A    E I      P+  + G  A
Sbjct: 99  DVDDSGTLEALNTRIVTHLLEAPESCTHEVA-----AYPDQEYI------PLQPFAGIPA 147

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
           K Y F LDPFQR ++ C++ ++SVLVSAHTSAGKT VAEYAIA +   KQRVIYT+P+K 
Sbjct: 148 KEYPFVLDPFQRQAILCIDNSQSVLVSAHTSAGKTVVAEYAIAKSLAAKQRVIYTTPIKG 207

Query: 131 LSNQKYRELHQ------------EFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE 178
               +   +H+            + + +G +       P    +    +  R        
Sbjct: 208 PVQPEVPRVHRRVQGRRPGHRRRDHQSLGFVPHHDHRDPQEHAVPRQRDYAR-------- 259

Query: 179 VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK 238
               V WV+FDEIHYM                                     W+CHLHK
Sbjct: 260 ----VGWVVFDEIHYM-------------------------------------WVCHLHK 278

Query: 239 QPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN 298
           QPCHVVYTD+RPTPLQHY+FP GG G++L+VDEK QF+EDNF     T     +    E 
Sbjct: 279 QPCHVVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFKEDNF-----TTAMAVLANAGEA 333

Query: 299 GKASGRMAKGG---SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
           GK   +  KGG     SG ++IFKIVKMIMER F PVI+FSFS+++CE  AM M+KLDFN
Sbjct: 334 GKGDQKGRKGGIKGHNSGQTNIFKIVKMIMERNFAPVIIFSFSKKDCEIFAMQMAKLDFN 393

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
           T +EK  V++VF NA+D L++EDR LP +E +LPLL+RGI +HH GLLP++KE +E+LF 
Sbjct: 394 TADEKKLVDEVFNNAMDVLSDEDRRLPQVENVLPLLRRGIGIHHGGLLPILKETIEILFG 453

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           EGL+KALFATETFAMGLNMPA+TV+FTA +K+DG   R+I SGEYIQM+GRAGRRG DD+
Sbjct: 454 EGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKDFRWISSGEYIQMAGRAGRRGLDDK 513

Query: 476 GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           GI I+M+DE++     +D+V GK  P+ S F L+Y  +LNL+ R E +   E++++ SF+
Sbjct: 514 GIVILMIDEKVSPAVGRDIVQGKADPINSAFHLTYNMVLNLL-RVE-EINPEYMLERSFY 571

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERV 595
           QFQ + ALP +  +V +   E   L    E  +A YH ++  +    K+    +TRP+ +
Sbjct: 572 QFQNQAALPRLHDQVEQKTIELNKLSIKDEHNIASYHHIREQLESHGKQFRQWLTRPQYL 631

Query: 596 LYYLGSGRLIKVREGGTDWGWGVVVNVVKK-----------PSAGVGTL----------- 633
           L +L  GRL+KV  G  ++ WG+V+N  K+           PS  +  L           
Sbjct: 632 LPFLQPGRLVKVSAGTQEYDWGIVLNFKKQDQSRKNPLKSEPSVTIDVLLHVSEAAAKSG 691

Query: 634 ------PS-RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRF-PQ 685
                 P+ RG   +VPV   LI+ +S IR+  P DLR  D R+++L  +   ++R  P 
Sbjct: 692 DTEPCQPNERGCMEVVPVAHTLITQISSIRVYFPNDLRSADNRRAVLKTIPGAKNRVSPW 751

Query: 686 GLPKLNP 692
             P LNP
Sbjct: 752 DPPVLNP 758


>gi|281209286|gb|EFA83459.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
          Length = 1275

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 338/959 (35%), Positives = 534/959 (55%), Gaps = 75/959 (7%)

Query: 48   YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
            +A    + I   F   + N   A  Y FELD FQ+ ++  +E+ +SV +SAHTSAGKT +
Sbjct: 340  WAFNDTKEITTPFKELITNP--AIEYPFELDSFQKQAIYHMEKGDSVFISAHTSAGKTVI 397

Query: 108  AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTE 167
            AEYAIAMA ++  R IYTSP+KALSNQK+R+    F  VGL+TGDV+++P+A+CLV+TTE
Sbjct: 398  AEYAIAMAAKNMTRAIYTSPIKALSNQKFRDFKNTFSSVGLITGDVSVNPSAACLVLTTE 457

Query: 168  ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
            ILR MLY+G+++++++ WVIFDE+HY+ D +RGVVWEE II LP  +K+V LSAT+SN  
Sbjct: 458  ILRSMLYKGADLIRDIEWVIFDEVHYLNDIDRGVVWEEVIIMLPAHVKIVLLSATVSNPL 517

Query: 228  QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
            +FA+WI    K   +V+ T  RP PL+HY+     + L+ +VD   +F  D + K   + 
Sbjct: 518  EFADWIGRTKKMHIYVIGTTKRPVPLEHYIH-TQSNDLFKIVDSSRRFLSDGYNKAYASI 576

Query: 288  LKQKIG-------GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
             K+          G    G  +G        SG S   K++ M+ E+   PVIVFSFS+ 
Sbjct: 577  FKETTNQPGGGNRGGGRGGNMAGGGGGAKRSSGWS---KLIMMLKEKNQLPVIVFSFSKA 633

Query: 341  ECEQHAMSM-SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHH 399
            +C+ +A S+ S +   T  E+  ++   + ++  L  ED+ LP I  +   L+RGI VHH
Sbjct: 634  KCQDYAFSLGSNVILTTSGERSIIKVFIEESLARLRAEDKELPQILQIRDFLERGIGVHH 693

Query: 400  SGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGE 459
             GLLP++KELVE+LF + LVK LFATETFAMG+NMPAKTVV++ ++K DG   R +  GE
Sbjct: 694  GGLLPIVKELVEILFSKSLVKVLFATETFAMGVNMPAKTVVYSHIRKHDGTQFRDLLPGE 753

Query: 460  YIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS 518
            Y QMSGRAGRRG D  G  I+   + + E  T++ M+LG P+ L S FRL+Y  ILNL+ 
Sbjct: 754  YTQMSGRAGRRGLDAVGTVILACWKDLPEQTTMESMILGVPSKLHSQFRLTYNMILNLLR 813

Query: 519  RAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKL 574
              +  F  E +IK SF +F  +K +P++   +  L ++  ++       GE ++  Y+ +
Sbjct: 814  VQD--FKVEDMIKRSFSEFATQKDVPEMRNAIESLRKDYEAIPPIQCILGEPDIENYYNM 871

Query: 575  KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL- 633
              +I          I   +   ++  +GR+             VV N   + S  +G L 
Sbjct: 872  YSEIKSSSSFTQRAILSSQSDAHF-QAGRV-------------VVYNPKNQSSVFIGCLL 917

Query: 634  ----PSRGGGYIVPVQLPLISTLS----------KIRLSVPPD--------------LRP 665
                PS GGG        +  T            KI  S   D              L+ 
Sbjct: 918  GCSIPSGGGGSRQFANSQINRTFRIFVAHEDGTYKIVNSESGDEEIKRICNEKLKIELKS 977

Query: 666  LDARQ--SILLAVQEL-----ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
            ++A +  S  + VQ+L     E   P G P L+P+  +K++  E V+   ++++LE  L 
Sbjct: 978  IEAGEAASSSVLVQQLHRLVEEYPLPLGPPALDPITKLKLKSVEFVENYQRLQKLEQLLP 1037

Query: 719  AHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
                +K           + +A+++ ++ Q+     D  +     E + R ++L+ LG+ID
Sbjct: 1038 ESKCHKCPKLSEHFALTENRAKIHQQLAQVTHSASDENL-ALMPEFQTRLKILRTLGYID 1096

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
             D  V LKG+ +  ++T +EL+V EL+F   F  L+  ++ A+ S  I  +K +   +L 
Sbjct: 1097 EDNNVLLKGKVSREVNTCEELIVPELIFENFFLALEPAEIVAVLSTMIFHEKDATAPSLT 1156

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVI 896
              L +  + L++ A +I +++++  LE   +   ES +  F LM+V Y W+KG  F E+ 
Sbjct: 1157 PRLNEARKSLEKLADRIKDMEHDHGLETPTNGE-ESKILNFGLMEVCYEWAKGMPFHEIC 1215

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ++T++ EG+I+R+  R+ E   ++R  A+ +G+  L +K   + + ++R I+F++SLY+
Sbjct: 1216 RLTNVLEGTIVRAITRIGETCQEVRNCARIIGDTKLYQKMDESIKLIKRDIVFASSLYI 1274


>gi|426250501|ref|XP_004018974.1| PREDICTED: LOW QUALITY PROTEIN: helicase SKI2W [Ovis aries]
          Length = 1245

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 344/951 (36%), Positives = 510/951 (53%), Gaps = 83/951 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
            G       ++  +   + R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546  GPAQ-DRGVYLSLLASLRRPRLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 604

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
              +  L   DR  P +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 605  RCLARLRGSDRRPPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 664

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 665  AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 724

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
            M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 725  MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 782

Query: 541  KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +AL ++ KK+  LEE     + +G+  ++ EY+    ++ +   ++   I      L  L
Sbjct: 783  QALAELTKKLGALEEP----EVTGQLIDLPEYYSWGEELTETRSQIQHRIIESVNGLKSL 838

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------PSRGGGYIVPVQLPLI 649
             +GR++ V+        GV++ V    ++ V T             R  G   P  +P  
Sbjct: 839  SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTALVLCDKPVSEDPRERGPASP-DVPYP 897

Query: 650  STLSKIRLSVP--------PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
              L   +L +P          L+P D        ++    +  +   K    K  K  DP
Sbjct: 898  DDLVGFKLFLPEGPCDHTVARLQPGDVAAITTKVLRLNGDKILEDFSKRQQPKFKK--DP 955

Query: 702  EVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQIRCFQRKA 738
                +   ++EL     AHP                       L   + E  IR  Q   
Sbjct: 956  PSAAVTTAVQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVH 1015

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHIDADGVVQ 783
                  Q LK + R  QIQK  + L+                R  VL+ LG++D  G V+
Sbjct: 1016 SSRFPAQYLKLRER-MQIQKEMERLRFLLSDXSLLLLPEYHQRVEVLRTLGYVDEAGTVK 1074

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + 
Sbjct: 1075 LAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQG 1133

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   E
Sbjct: 1134 VERVRTVAKRIGEVQAACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPE 1192

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1193 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1243


>gi|321468891|gb|EFX79874.1| hypothetical protein DAPPUDRAFT_304359 [Daphnia pulex]
          Length = 1192

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 342/966 (35%), Positives = 541/966 (56%), Gaps = 83/966 (8%)

Query: 54   EAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIA 113
            E  +    NP +      T+ FELD FQ+ ++  LE+ E V ++AHTSAGKT VAEYAIA
Sbjct: 243  ENFYDLVPNPAF------TWPFELDRFQKHAIIHLEKGEDVFIAAHTSAGKTVVAEYAIA 296

Query: 114  MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGML 173
            ++ +   R IYTSP+KALSNQK+R+    F DVGL+TGDV ++  A+CL+MTTEILR ML
Sbjct: 297  LSQKHMTRAIYTSPIKALSNQKFRDFKTTFTDVGLLTGDVQINAKATCLIMTTEILRSML 356

Query: 174  YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
            Y GS++++++ WVIFDE+HY+ D ERGVVWEE +I LP  + +V LSAT+ N ++FA W+
Sbjct: 357  YNGSDIIRDLEWVIFDEVHYINDSERGVVWEEVLILLPSHVNIVMLSATVPNTSEFATWV 416

Query: 234  CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFL 288
                 +  +V+ T  RP PL+HY++  G +G      +L+V+ +  F    ++   +   
Sbjct: 417  GRTKGRKMYVISTLKRPVPLEHYLY-TGLTGKSKDERFLIVNAEGAFVPKGYMAAMEAKK 475

Query: 289  KQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS 348
             ++   +     A+    +GG     + +  ++  + +++  PV+ F+FSR  C+Q++  
Sbjct: 476  SKEKDVKPGGAAAAAGRGRGGQAQEKNLLIALLDHLKKQEQLPVVAFTFSRNRCDQNSSL 535

Query: 349  MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
            ++ +D  T EE+  + Q FQ  V  L   D+ LP +  M  LLKRGI VHHSG+LP++KE
Sbjct: 536  LTSVDLVTAEERGRIHQFFQKCVSRLKGSDQKLPQVTNMQTLLKRGIGVHHSGILPILKE 595

Query: 409  LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
            +VE+LFQEGLVK LFATETFAMG+NMPA+TVVF  ++K DG   R +   EYIQM+GRAG
Sbjct: 596  VVEMLFQEGLVKLLFATETFAMGVNMPARTVVFDTIRKHDGTGFRNLLPAEYIQMAGRAG 655

Query: 469  RRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
            RRG D  G  II+    + E + L  M+LG+P  L S FR++Y  ILNL+ R E     E
Sbjct: 656  RRGLDTTGTVIILCKNDVPESSELHAMMLGQPMKLSSQFRVTYSMILNLL-RVE-HLRVE 713

Query: 528  HVIKNSF---HQ--------------FQYEKALPDIGKKVS--------------KLEEE 556
             ++K SF   HQ              +   + LP +   +               +L+EE
Sbjct: 714  DMMKRSFGEDHQQSKLGKVKEQLQKLYDQVQMLPQLACDICTDIDSYYNNASAYLRLKEE 773

Query: 557  AASLDASGEAEVAEYHKLKLDIAQLEKK------LMSEITRPERVLYYL-----GSGRLI 605
                  S  + V E +  ++ I Q + +      L+S  +R +  LY +     G G + 
Sbjct: 774  MQESLLSHPSMVREMNPGRVLIVQHQSRCNKLAILLSVDSRSKEKLYKILLLVSGDGEVA 833

Query: 606  KVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPD--L 663
              ++   D  W  ++ +  +   G+    SR    +V ++   I  +++ +L +  D  +
Sbjct: 834  NKKD---DLIWTKMLGI-SQLKKGLFYPTSRVNHAVVLIKAKQIWEVTRTQLKIESDKIV 889

Query: 664  RPLDARQ-----------SILLAVQELESRFPQG--LPKLNPVKDMKIEDPEVVDLVNQI 710
               D RQ           S  +AVQEL SR  Q   +  +NP++D K  + ++V  + ++
Sbjct: 890  ADWDNRQIPRFRDNPPGPSCSMAVQEL-SRLSQAASIEVINPLQDWKWTNMDLVGKMQEL 948

Query: 711  EELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRV 769
              L ++L +      SQ E  +        +  E+Q+ +  + +  +     E  +R  V
Sbjct: 949  TILLNRLASATCTACSQFEQHLEQTSASMSIQEELQRTQFLLSEDSLLH-SAEYHSRLEV 1007

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGD-ELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            LK+L ++D +G +Q+KG+ AC  + G+ EL++TEL+F+    +L   ++AAL SC +   
Sbjct: 1008 LKELNYVDGNGTLQMKGKVAC--EMGNHELIITELVFHNVLTELQPAEIAALLSCLVFQQ 1065

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            K++ +  +   L K   +++E A KI   Q  C L+  V ++V+   R  L++V+Y W+K
Sbjct: 1066 KNASEPTMTPVLEKGRYRIREIAEKIGRTQQACGLKEAVGDFVDQ-FRFELVEVVYEWAK 1124

Query: 889  GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            G  FAE++ +TD+ EG I+R  +RLDE L  +R AA+ +G+  L +K   AS +++R I+
Sbjct: 1125 GMPFAEIMGLTDVQEGMIVRCIQRLDETLRDVRDAARIIGDPILYQKMGEASTAIKRDIV 1184

Query: 949  FSNSLY 954
            F+ SLY
Sbjct: 1185 FAASLY 1190


>gi|297677763|ref|XP_002816718.1| PREDICTED: helicase SKI2W isoform 1 [Pongo abelii]
          Length = 1244

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 352/965 (36%), Positives = 516/965 (53%), Gaps = 112/965 (11%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKL----QDTFLKQKIGGRRENGKASG 303
            L+HY+F  G S      L+L++D +  F    +       ++    Q  G ++       
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKNEQHAQTFGAKQPTHPVGP 545

Query: 304  RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
               +G           ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +
Sbjct: 546  AQDRG-------VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI 598

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
                Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LF
Sbjct: 599  HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF 658

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETFAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++  
Sbjct: 659  ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK 718

Query: 484  EQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF----- 537
             ++ EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F     
Sbjct: 719  GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKD 776

Query: 538  --QYEKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPER 594
               +E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I     
Sbjct: 777  SKAHEQALAELTKRLGALEEP----DMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVN 832

Query: 595  VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVP 643
             L  L +GR++ V+        GV++ V    ++ V T            P   G     
Sbjct: 833  GLKSLSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATSE 892

Query: 644  VQLPLISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKL 690
            V  P    L   +L +P          L+P D  A  + +L V     LE    +  PK 
Sbjct: 893  VPYP--DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKF 950

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQD 727
                    +DP +  +   ++EL     AHP                       L   + 
Sbjct: 951  K-------KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKL 1003

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKK 772
            E  I+  Q         Q LK + R  QIQK  + L+                R  VL+ 
Sbjct: 1004 EELIQGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRT 1062

Query: 773  LGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDK 829
            LG++D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D 
Sbjct: 1063 LGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDT 1121

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
              +  N    L + +++++  AR+I E+Q  C L   V+E+V   +   L++V+Y W++G
Sbjct: 1122 GDQLPN---TLKQGIERVRAVARRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARG 1177

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
              F+E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F
Sbjct: 1178 MPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVF 1237

Query: 950  SNSLY 954
            + SLY
Sbjct: 1238 AASLY 1242


>gi|145492477|ref|XP_001432236.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399346|emb|CAK64839.1| unnamed protein product [Paramecium tetraurelia]
          Length = 437

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 254/418 (60%), Positives = 319/418 (76%), Gaps = 26/418 (6%)

Query: 29  KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
           K Q N    C+HE   P  Y    D+             + AK Y F LDPFQ+V+V  L
Sbjct: 43  KNQEN--EGCIHEWYTPEDYQPLLDKK------------QNAKQYKFTLDPFQKVAVKTL 88

Query: 89  ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
           E NESVLV+AHTSAGKTAVAEYAIAMA RDKQRV+YTSP+KALSNQKYREL QEF DVGL
Sbjct: 89  ESNESVLVAAHTSAGKTAVAEYAIAMAKRDKQRVVYTSPIKALSNQKYRELQQEFGDVGL 148

Query: 149 MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
           +TGDVTL+ NA CLVMTTEILR MLYRGSE+++EVAWVI DE+HYM+DRERGVVWEE+II
Sbjct: 149 VTGDVTLNENAFCLVMTTEILRSMLYRGSEIVREVAWVIMDEVHYMRDRERGVVWEETII 208

Query: 209 FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLV 268
            L   ++ VFLSAT+ NA++FAEW+C + +QPCHVVYTD+RPTPLQHY+FP G  G+YLV
Sbjct: 209 LLNQNVRFVFLSATIPNASEFAEWVCRIKRQPCHVVYTDYRPTPLQHYLFPSGAEGIYLV 268

Query: 269 VDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERK 328
           VDE  +F+ED F         Q+   + E    + R  K    + GSD+FK++KMI ER+
Sbjct: 269 VDETGKFKEDKF---------QEAVAKLEENVENTRKRK---ATEGSDLFKLMKMIQERE 316

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             P IVFSFS+RE E +A+ M KLD  T +EK+ +E +++NA++CL+EEDR LP I+LML
Sbjct: 317 LAPAIVFSFSKREVEGYAIGMQKLDLTTPKEKENIETIYKNAMNCLSEEDRQLPQIQLML 376

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
           P+LK+GI +HH GLLP++KE++E+LFQEG +KALF+TETF+MGLNMP++TVVFT+V+K
Sbjct: 377 PILKKGIGIHHGGLLPIVKEIIEILFQEGYLKALFSTETFSMGLNMPSRTVVFTSVRK 434


>gi|242064106|ref|XP_002453342.1| hypothetical protein SORBIDRAFT_04g004160 [Sorghum bicolor]
 gi|241933173|gb|EES06318.1| hypothetical protein SORBIDRAFT_04g004160 [Sorghum bicolor]
          Length = 1354

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 339/1007 (33%), Positives = 546/1007 (54%), Gaps = 149/1007 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + FELD FQ+ ++  LE+ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 375  DMAIEFPFELDKFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 434

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+   +F DVGL+TGDV++ P A+CL+MTTEILR MLYRG+++++++ WVI
Sbjct: 435  IKTISNQKYRDFSGKF-DVGLLTGDVSIRPEATCLIMTTEILRSMLYRGADIIRDIEWVI 493

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE                 + N  +FA+WI    ++   V  T+
Sbjct: 494  FDEVHYVNDAERGVVWEE-----------------VPNTVEFADWIGRTKQKKIRVTSTN 536

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ---KIG----------- 293
             RP PL+H +F    SG    + E++ F    F + +D F K+   K G           
Sbjct: 537  KRPVPLEHCLF---YSGEVYKICERDMFLTQGFKEAKDAFKKKNSNKFGVKPGPRSGTPA 593

Query: 294  ------GRRENGKASGRMAK----GGSGSGGSDI---------------FKIVKMIMERK 328
                  G+  +    GR  K      S SG + +                 +V  ++++ 
Sbjct: 594  VRAGTQGKNPDTSNKGRDQKYPKHHNSNSGAATVQQSSSGPKRFETLFWMPLVNNLLKKS 653

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
              PV++F FS+  C++ A SM   D  +  EK  +      A   L   DRNLP +  + 
Sbjct: 654  LVPVVIFCFSKNRCDKSADSMFGADLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVVGIQ 713

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF +++K+D
Sbjct: 714  SLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDSLRKFD 773

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFR 507
            G  HR +  GEYIQM+GRAGRRG D+ G  IIM  DE  E + LK++++GKP  L S FR
Sbjct: 774  GKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIIMCRDEIPEESDLKNLIVGKPTRLESQFR 833

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK-LEEEAASLDA-SGE 565
            L+Y  IL+L+ R E +   E ++K SF +F  +K LP+  K + + L +   +++   GE
Sbjct: 834  LTYTMILHLL-RVE-ELKVEDMLKRSFAEFHAQKNLPEKEKLLLQMLRQPTRTIECIKGE 891

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGWGVVVNVVK 624
              + EY+++ L+  +  + +   I +      +L  GRL+ V+ +   D   GV++   K
Sbjct: 892  PSIEEYYEVALEAEKHRESITQAIMQLPNSQQFLTPGRLVVVKSDCDDDHLLGVIL---K 948

Query: 625  KPSA----------------------------GVG----------------------TLP 634
             PS                             G G                      ++ 
Sbjct: 949  NPSPMLKKYVVLVLTGDCSSSVLAPEFNKNEKGPGDFQGGQFIALKGKRGMDDEYYSSVI 1008

Query: 635  SRGGGYIVPVQLP--------------------LISTLSKIRLSVPPDLRPLDARQSILL 674
            SR G  ++ ++LP                    +I   SKI++     +R L+    I  
Sbjct: 1009 SRKGSGVITIKLPYKGDASGMGFEVRAIENKEIMIICTSKIKVD---QVRLLEDPNKITY 1065

Query: 675  A--VQELESRFPQGL---PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDE 728
            +  VQ+L    P G    P L+ +KD+K++D ++V+  +    L  K+  +  +   + +
Sbjct: 1066 SRTVQQLMKEQPDGTKFPPALDAIKDLKMKDMDLVESYHAYHRLLQKMSENKCHGCIKLK 1125

Query: 729  NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
              I   + +     E+ +LK +M D  +++   E + R  +LK + +ID+D VVQLKGR 
Sbjct: 1126 EHISLMKEEKMYKDELSKLKFQMSDEALKQM-PEFQGRIELLKIIEYIDSDLVVQLKGRV 1184

Query: 789  ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 848
            AC +++G+EL+ TE +F    +DL+  +  A+ S F+   +++ + +L  +LA+  ++L 
Sbjct: 1185 ACEMNSGEELISTECLFENQLDDLEPEEAVAIMSAFVFQQRNASEPSLTPKLAEAKKRLY 1244

Query: 849  ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
            ++A ++ ++Q + ++ V+ +EY    ++  L++V+Y W+KG  F+++ ++TD+ EG I+R
Sbjct: 1245 DTAIELGKLQADLQVPVDPEEYARDNLKFGLVEVVYEWAKGTPFSDICELTDVSEGIIVR 1304

Query: 909  SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  RLDE   + R AA  +G   L KK   AS +++R I+F+ SLY+
Sbjct: 1305 TIVRLDETCREFRNAASIMGNSALFKKMEIASNAIKRDIVFAASLYV 1351


>gi|395737037|ref|XP_003776851.1| PREDICTED: helicase SKI2W isoform 2 [Pongo abelii]
          Length = 1144

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 352/965 (36%), Positives = 516/965 (53%), Gaps = 112/965 (11%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 207  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 266

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 267  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 326

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 327  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 386

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKL----QDTFLKQKIGGRRENGKASG 303
            L+HY+F  G S      L+L++D +  F    +       ++    Q  G ++       
Sbjct: 387  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEAKKNEQHAQTFGAKQPTHPVGP 445

Query: 304  RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
               +G           ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +
Sbjct: 446  AQDRG-------VYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEI 498

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
                Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LF
Sbjct: 499  HLFLQRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLF 558

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETFAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++  
Sbjct: 559  ATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCK 618

Query: 484  EQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF----- 537
             ++ EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F     
Sbjct: 619  GRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKD 676

Query: 538  --QYEKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPER 594
               +E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I     
Sbjct: 677  SKAHEQALAELTKRLGALEEP----DMTGQLVDLPEYYGWGEELTETQHMIQRRIMESVN 732

Query: 595  VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVP 643
             L  L +GR++ V+        GV++ V    ++ V T            P   G     
Sbjct: 733  GLKSLSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATSE 792

Query: 644  VQLPLISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKL 690
            V  P    L   +L +P          L+P D  A  + +L V     LE    +  PK 
Sbjct: 793  VPYP--DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKF 850

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQD 727
                    +DP +  +   ++EL     AHP                       L   + 
Sbjct: 851  K-------KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKL 903

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKK 772
            E  I+  Q         Q LK + R  QIQK  + L+                R  VL+ 
Sbjct: 904  EELIQGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRT 962

Query: 773  LGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDK 829
            LG++D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D 
Sbjct: 963  LGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDT 1021

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
              +  N    L + +++++  AR+I E+Q  C L   V+E+V   +   L++V+Y W++G
Sbjct: 1022 GDQLPN---TLKQGIERVRAVARRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARG 1077

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
              F+E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F
Sbjct: 1078 MPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVF 1137

Query: 950  SNSLY 954
            + SLY
Sbjct: 1138 AASLY 1142


>gi|146420647|ref|XP_001486278.1| hypothetical protein PGUG_01949 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1248

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 346/980 (35%), Positives = 530/980 (54%), Gaps = 111/980 (11%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+ + FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 287  MAREWPFELDTFQQEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMATRNMTKAIYTSPI 346

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+R+  + FKD  VGL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 347  KALSNQKFRDFKETFKDIDVGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFV 406

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 407  IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 466

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR----------- 295
              RP PL+  ++      LY VVD +  F +  F K ++     K  GR           
Sbjct: 467  PKRPVPLEILIW--AKQHLYKVVDAQRNFSDLEFRKHKEALESGKNKGRPNVVLGPGSRG 524

Query: 296  ----------------------------RENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
                                        + + + SGR      G   +   ++V+ + + 
Sbjct: 525  GRGGTARGGNRGGGRGGGGSGRGGSNGGQVSTRPSGRAGFSRDGPNKNTWLQLVQYLKQH 584

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
               P +VF FS++ CE++A ++S +DF T +EK  +      AV  L +EDR LP I  +
Sbjct: 585  NLLPAVVFVFSKKRCEEYADTLSSVDFCTAKEKSEIHMFVDRAVSRLKKEDRELPQILKI 644

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
              LL RGIAVHH GLLP++KE +E+LF   LVK LFATETFAMGLN+P +TVVF  ++K 
Sbjct: 645  RDLLSRGIAVHHGGLLPIVKECIEILFSRTLVKVLFATETFAMGLNLPTRTVVFNQLRKH 704

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTF 506
            DG   R +  GE+ QMSGRAGRRG DD G  I+M  +E +     K++ LG P  L+S F
Sbjct: 705  DGRGFRNLLPGEFTQMSGRAGRRGLDDTGTVIVMSYNEPLSPMDFKEVALGVPTKLLSQF 764

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE--AASLDASG 564
            RL+Y  ILNL+ R E     E +IK+SF +   +  LP+  K V KL +E     L+   
Sbjct: 765  RLTYNMILNLL-RIEA-LRVEEMIKHSFSENSTQSLLPEHQKTVEKLSKELQTVHLEPCS 822

Query: 565  EAEVAEYHKLKLDIAQLEKKLMSEITRPERVL-----YYLGSGRLIKVREGGTDWGWGVV 619
               + E+ +   D+ +  + +  EI R  + L      YL +GRL   R+  T    G +
Sbjct: 823  VCNL-EFTEETYDLMKEYEHVYGEILRNVQQLPLLKNNYLRAGRLFCFRDEETRQRVGFL 881

Query: 620  VNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIR--------------LSVPPDLRP 665
            V V     + +      G       +LP I+T   ++              ++VP D   
Sbjct: 882  VRVSMDNDSVLLLTFDPGDNQDDVSKLPYIATKDYLQHYFGQITFNGSFKVVAVPIDKVN 941

Query: 666  LDARQSILLAVQELES-----------------RFPQGLPKLN-------PVKDMKIEDP 701
               ++ + + +++L                   RF     +L+        + ++ +   
Sbjct: 942  FIGQKMVKIYMKDLIHGNKNEIAHASAQVKTLLRFQTAWRELSFDLAVQISLHELLVRKR 1001

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
            E+V+ ++ +   E   FA  L+  Q         ++ E+  +I  L+  + D  ++   D
Sbjct: 1002 EIVEKISILRSYECPNFA--LHYKQ-------LSQQDELKTQISSLQRLISDENLELLPD 1052

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
              + R RVL+ LG IDA+  V LKGR  C I++G EL +TEL+ +    D +  ++ AL 
Sbjct: 1053 -YEQRLRVLETLGFIDANHNVGLKGRVGCEINSGWELAITELILDNFLGDFEPEEIVALL 1111

Query: 822  SCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEI--QNECKLEVNVDEYVESTV 875
            SCF+   K++++    +  R+E  K  Q++ + ++ + ++   N+  L     E++E   
Sbjct: 1112 SCFVYEGKTNDEEDPPLTPRLERGK--QKIMDISKHVLDVCSDNQIALTSEETEFLERK- 1168

Query: 876  RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
            R  LM+V+Y W++G +F E++QM+   EG+I+R   RLDE   Q+++AA  VG+  L  K
Sbjct: 1169 RFALMNVVYEWARGLSFNEIMQMSTEAEGTIVRVITRLDEICRQVKSAALIVGDSTLHSK 1228

Query: 936  FAAASESLRRGIMFSNSLYL 955
             + A E ++R I+F  SLYL
Sbjct: 1229 MSEAQERIKRDIVFCASLYL 1248


>gi|164660939|ref|XP_001731592.1| hypothetical protein MGL_0860 [Malassezia globosa CBS 7966]
 gi|159105493|gb|EDP44378.1| hypothetical protein MGL_0860 [Malassezia globosa CBS 7966]
          Length = 1224

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 351/989 (35%), Positives = 524/989 (52%), Gaps = 126/989 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  Y FELD FQ+ +V  LERN+SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 261  QMAHEYPFELDTFQKQAVYHLERNDSVFVAAHTSAGKTVVAEYAIALAMKHMSRCIYTSP 320

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+RE  Q F  ++VG++TGDV ++P A+CL+MTTE+LR MLYR  E++++V +
Sbjct: 321  IKALSNQKFREFKQAFGAENVGIVTGDVKINPEAACLIMTTEVLRSMLYRAGELIRDVEF 380

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D+ERGVVWEE II LP  +  V LSAT+ N  +FA+W+    ++  +V+ 
Sbjct: 381  VIFDEVHYVNDQERGVVWEEVIILLPAYVNTVLLSATVPNTQEFADWVGRTRRRDVYVIS 440

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            T  RP PL+H+++   G  L+ +VD   +F      +  D  L +K    RE    +G  
Sbjct: 441  TPKRPVPLEHFLY--AGKQLHKIVDANGRFLSKGVNEAADALLSKK---EREAAYTTGSS 495

Query: 306  A------------------------------------KGGSGSGGSDIFKIVKMIMERKF 329
            A                                    +    S  S    IV ++ ++  
Sbjct: 496  AQRGHRGGRGGGPAGRSGGSSGRGGGNSSAGGGVGRPRPSMASDRSLWVNIVGLLKKQSL 555

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             PV+VF FS+++CE++A S+   D +T +EK  V  + + ++  L EEDR +P I  M  
Sbjct: 556  LPVVVFVFSKKKCEEYADSLPNTDLSTAKEKSEVHVLIERSLMRLKEEDRQVPQIARMRD 615

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LL RGI VHHSGLLP++KELVELLFQ  LVK LFATETFAMG+NMPA++VVF+ V+K DG
Sbjct: 616  LLSRGIGVHHSGLLPIVKELVELLFQRTLVKVLFATETFAMGVNMPARSVVFSGVRKNDG 675

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
            +  R +  GEY QM+GRAGRRG D  G+ II+ D   E+N L  M+LG+   L S FR++
Sbjct: 676  NKFRNLLPGEYTQMAGRAGRRGLDKTGVVIILSDNP-ELNPLNRMILGESTKLKSQFRIT 734

Query: 510  YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE----------EEAAS 559
            Y  ILNL+ R E     E +IK SF +   +K +P    ++  LE          E +AS
Sbjct: 735  YCMILNLL-RIE-TLKVEDMIKRSFSENAAQKLMPQHQGRLKNLEHKLHAWTKRLESSAS 792

Query: 560  LDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV 619
            L       ++  + L   + ++   L++      +      SGR++ V  G       ++
Sbjct: 793  LPIDA---LSRLYDLSNKLVRVNDNLLALAYEHPQGAKLFSSGRVVLVYTGTHILSPAMI 849

Query: 620  VNVV--KKPSAGVGTLP----------------------SRGGGYIVPVQ---LPLISTL 652
            V +   KK    +  LP                      +R   Y+  +Q   L  I+ +
Sbjct: 850  VRLASNKKFLVLLAVLPDQQPLEKHQAPFWVTSKLAKDMARDSEYMPELQEVSLSKIAFV 909

Query: 653  SKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPV-----KDMKIEDPEVVDLV 707
            S   + +P  L    +R+         +++  QGL  L P        ++    E    +
Sbjct: 910  SSFSVPIPATL--FQSRR---------QAKLQQGLDLLRPSIEQIRNHLEAAGDEAARAI 958

Query: 708  NQIEELEHKLFAHPLNKSQ-DENQI-------RCFQRKAEVNHEIQQLK-SKMRDSQIQK 758
              +E    ++       +Q D NQI       +   +K   + E + L   K+ + ++ K
Sbjct: 959  LDLEADWSRVRRIDFQDTQKDRNQILSELIPEQGLMQKPGFDKEFKLLTICKLTEWEMAK 1018

Query: 759  FRDELKN-----------RSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFN 806
                L N           R  VLK+L  ID +   V LKGR AC I + +EL++TEL+ +
Sbjct: 1019 VSASLSNQNLELLPDYHQRVDVLKELRFIDPESETVMLKGRIACGIRSVNELIMTELILD 1078

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
             TF D + H++AAL S F   + +S    L   L + L  + ++A +IA +Q    L+  
Sbjct: 1079 NTFVDYEPHEIAALLSVFHFRENTSLTPELNDTLQRGLDHISKTADRIAAVQMAHHLQPE 1138

Query: 867  VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
             D    ST+   L++V+Y W++G  F++++Q+TD+ EG+I+R   RLDE   ++R  A  
Sbjct: 1139 DDA---STLHTGLVEVVYEWTRGLHFSDIMQLTDVGEGTIVRCITRLDETFREVRECASV 1195

Query: 927  VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +G   L +K     + +RR I+F+ SLY 
Sbjct: 1196 IGNAPLYQKMETCQQLVRRDIVFAASLYF 1224


>gi|351713165|gb|EHB16084.1| Helicase SKI2W [Heterocephalus glaber]
          Length = 1238

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 344/967 (35%), Positives = 512/967 (52%), Gaps = 134/967 (13%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 319  WAFEPDVFQKQAILHLEKHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 378

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 379  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 438

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI-CHLHKQPC---------- 241
            Y+ D ERGVVWEE  I LP  + ++ LSAT+ NA +FA+WI C     PC          
Sbjct: 439  YINDAERGVVWEEVFIMLPDHVSVILLSATVPNALEFADWIGCCRSSGPCLWTSPPRRLK 498

Query: 242  ----HVVYTDFRPTPLQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG 293
                +V+ T  RP PL+H++F    P     L+L++D +  F    +    +   K+++ 
Sbjct: 499  RRQIYVISTLTRPVPLEHHLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMS 557

Query: 294  GRREN--GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
               +    K  GR A  G          ++  +  R   PV+VF+FSR  C++ A  ++ 
Sbjct: 558  KHAQTFGAKQPGRQA--GPAQDRGVYLSLLASLRARAQLPVVVFTFSRGRCDEQASGLTS 615

Query: 352  LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
            LD  T  EK  +    Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE
Sbjct: 616  LDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVE 675

Query: 412  LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
            +LF  GLVK LFATETFAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG
Sbjct: 676  MLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRG 735

Query: 472  KDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
             D  G  +++   ++ EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++
Sbjct: 736  LDPTGTVVLLCKARVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMM 793

Query: 531  KNSFHQFQY-------EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLE 582
            K SF +F +       E+ L ++ KK+  LEE     D +G+ A++ +Y+    ++ +  
Sbjct: 794  KRSFSEFPFRKDSKAHEQTLAELTKKLGSLEEP----DVTGQLADLPDYYGWGEELVETR 849

Query: 583  KKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT---------- 632
             ++   I      L  L  GR++ V+        GV++ V    ++ V T          
Sbjct: 850  SRIQQRILESVNGLKSLSVGRVVVVKSQEHHNALGVILQVSSSSASRVFTTLVLCDKPES 909

Query: 633  --LPSRGGGYIVPVQLPLISTLSKIRLSVP--------PDLRPLDA-------------- 668
              L  RG     P  +P    L   +L +P          L+P D               
Sbjct: 910  QGLQDRGLATPTP-DVPHPDDLVGFKLFLPEGPCDHTVAKLQPADVAAITTKVLRVHGEK 968

Query: 669  -------RQ-----------SILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
                   RQ           ++  AVQE   L    P G P L+PV D++++D  VV+  
Sbjct: 969  ILEDFSKRQQPKFRKDPPLAAVATAVQELVRLAQACPAGPPTLDPVSDLQLKDVSVVEGG 1028

Query: 708  NQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
             +  +LE  +                  R A+  H                     +  +
Sbjct: 1029 LRARKLEELI------------------RGAQCVHSP-------------------RFSA 1051

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            +VL+ LG++D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +  
Sbjct: 1052 QVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQ 1110

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
                   +L   L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W+
Sbjct: 1111 TPGDPGDHLPSTLKQGVERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWA 1169

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            +G  F+E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I
Sbjct: 1170 RGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDI 1229

Query: 948  MFSNSLY 954
            +F+ SLY
Sbjct: 1230 VFAASLY 1236


>gi|428179430|gb|EKX48301.1| hypothetical protein GUITHDRAFT_54608, partial [Guillardia theta
           CCMP2712]
          Length = 450

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 263/474 (55%), Positives = 345/474 (72%), Gaps = 32/474 (6%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FELDPFQ  ++ CL R ESVLV+AHTSAGKT VA+YAIA+A +  QRVIYT+P+KALS
Sbjct: 1   FPFELDPFQTAAIDCLHREESVLVAAHTSAGKTVVAQYAIALAIKHNQRVIYTTPIKALS 60

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKYR+L   F  +D+GLMTGDVT++  A+C+VMTTEILR MLY GS+ L+EVAWVIFDE
Sbjct: 61  NQKYRDLGMFFSQQDIGLMTGDVTVNSEANCIVMTTEILRSMLYHGSDELREVAWVIFDE 120

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY++D+ERG     SII LP  IK+VFLSAT+ N+ +FA+W+ +L   PC+VV TDFRP
Sbjct: 121 VHYLRDKERG-----SIILLPIQIKLVFLSATIPNSLEFAQWVANLKGLPCNVVQTDFRP 175

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVK---LQDTFLKQKIGGRRENGKASGRMAK 307
           TPLQH++FP GG+G++L++DE   F EDNF+K   LQD+  + K  G+ +          
Sbjct: 176 TPLQHFMFPAGGNGIFLILDEAGNFLEDNFIKMMTLQDSRAESKTKGKEQ---------- 225

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK---LDFNTQEEKDTVE 364
                   DI K+V  + +R   P IVF+FSRRECE  A+  S+   L    + +  +++
Sbjct: 226 -------PDIIKLVSFVADRGMCPAIVFAFSRRECEALALQTSRCKSLRLVGESQVLSIK 278

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
           +VF+ A+  L +ED+ LP I+ +LPLL  GI VHHSGLLP+++EL+E+LFQEGLVK LFA
Sbjct: 279 EVFEKALQGLAKEDQELPQIQNILPLLCCGIGVHHSGLLPILRELIEILFQEGLVKVLFA 338

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TETFA+GLNMPAKT +FT  +K+DG  HR+I SGEYIQM+GRAGRRG DD+G  I M DE
Sbjct: 339 TETFALGLNMPAKTCIFTNCRKFDGQDHRWISSGEYIQMAGRAGRRGIDDKGCVITMFDE 398

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
            +E  T +D++ G+P+PLVSTF L+Y  ILN M R+ G    E +I  SFHQ+Q
Sbjct: 399 HLEPETARDILCGQPSPLVSTFHLNYNMILNAM-RSSG-VDPEKIITKSFHQYQ 450


>gi|356569566|ref|XP_003552970.1| PREDICTED: helicase SKI2W-like [Glycine max]
          Length = 1342

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 339/1005 (33%), Positives = 543/1005 (54%), Gaps = 126/1005 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + FELD FQ+ ++  LE+ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 344  DMALEFPFELDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAP 403

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+L  +F DVGL+TGDV+L P ASCL+MTTEILR MLYRG+++++++ WVI
Sbjct: 404  IKTISNQKYRDLCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 462

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 463  FDEVHYVNDVERGVVWEEVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKEIRVTGTT 522

Query: 248  FRPTPLQHYVFPVGGSGLYLVVD------------EKEQFREDNFVKLQDTFLKQKIGG- 294
             RP PL+H +F  G   LY + +            +KE  R+ N      +  K  I   
Sbjct: 523  KRPVPLEHCLFYSG--ELYKICESEKFLPQGLKAAKKEASRKKNLTAGGGSGPKPGISPG 580

Query: 295  -------RREN------------GKASGRMAKGGSGSG-------GSDIFKIVKMIMERK 328
                   +REN            G   G    G   S         S +  ++  + ++ 
Sbjct: 581  HDKARVQKRENTSHTKHHGANFYGTGRGYQNNGNGQSNWELRRADASMLLMLINKLSKKS 640

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
              PV++F FS+  C++ A S++  D  +  EK  +      A   L   D+NLP +  + 
Sbjct: 641  LLPVVIFCFSKNRCDKSADSLTGTDLTSSSEKSEIRLFCDKAFSRLKGSDKNLPQVVRVQ 700

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF  ++K+D
Sbjct: 701  NLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFD 760

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFR 507
            G   R + +GEY QM+GRAGRRG D  G  I+M  DE  E + L+ +++G    L S FR
Sbjct: 761  GKEFRQLLAGEYTQMAGRAGRRGLDKIGTVILMCRDELPEESDLEPVIVGSATRLESQFR 820

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS-KLEEEAASLDA-SGE 565
            L+Y  IL+L+ R E +   E ++K SF +F  +K LP++ + +  KL +   +++   GE
Sbjct: 821  LTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEMQQLLKRKLNQPTKAIECLKGE 878

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGWGVVVNV-- 622
              + EY+ L L+      ++   I +      +L +GR++ V+ E   D   GVVV    
Sbjct: 879  PTIEEYYDLYLEAETYSNQISEAILQSPSAQQFLNTGRVVIVKSESAQDHLLGVVVETPS 938

Query: 623  ---------VKKP--------SAGVGTLPSRGGGY------------------------- 640
                     V KP        ++  G + ++ G +                         
Sbjct: 939  PTNKMYIVFVIKPDMPSSVDNASSSGNMQNKSGAFDQGYFVMPKSRRVVVDEYSTSVSAR 998

Query: 641  ----IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE------------SRFP 684
                ++ ++LP   +   +   V    R +D+++ + +   +++            S + 
Sbjct: 999  KGKGVITIRLPYSGSACGMGYEV----REVDSKEFLCICSSKIKIDRVGLLEDISSSVYS 1054

Query: 685  QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA--HPLNKSQDE-NQIRC-----FQR 736
            + +  L  +K    + P  +D V  ++  + KL A  H   +  ++ +Q +C      + 
Sbjct: 1055 KTVQLLMDLKSDGNKYPPALDPVKDLKLRDVKLVATYHKWTRLLEKMSQNQCHGCIKLEE 1114

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELK------NRSRVLKKLGHIDADGVVQLKGRAAC 790
              ++  EI++ K ++   Q Q   + LK       R  VLK++G ID D VVQ+KGR AC
Sbjct: 1115 HLKLAKEIKKHKEEVYALQFQMSDEALKQMPDFQGRIDVLKQIGCIDEDLVVQMKGRVAC 1174

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             +++G+EL+ TE +F    ++L+  +  A+ S F+   K++ + +L  +L++   +L ++
Sbjct: 1175 EMNSGEELICTECLFENQMDELEPEEAVAIMSAFVFQQKNTSEPSLTPKLSEAKHRLYQT 1234

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            A ++ E+Q    L +N  EY +  ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+ 
Sbjct: 1235 AIRLGELQAHFNLPINPAEYAQENLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTI 1294

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             RLDE   + + AA  +G   L KK   AS +++R I+F+ SLY+
Sbjct: 1295 VRLDETCREFKNAAAIMGNSALCKKMEIASNAIKRDIVFAASLYI 1339


>gi|255714128|ref|XP_002553346.1| KLTH0D14630p [Lachancea thermotolerans]
 gi|238934726|emb|CAR22908.1| KLTH0D14630p [Lachancea thermotolerans CBS 6340]
          Length = 1267

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 348/972 (35%), Positives = 541/972 (55%), Gaps = 103/972 (10%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 313  ARTWPFELDVFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAKRNMTKTIYTSPIK 372

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  ++F+DV  GL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 373  ALSNQKFRDFKEDFEDVDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 432

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 433  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 492

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG-RRENGKASGRMA 306
             RP PL+  ++      L  V++EK +F E NF K     +  K G   R+N K      
Sbjct: 493  KRPVPLEINIW--AKDRLVPVINEKREFLEANF-KAHKELVSGKSGPPDRKNEKPGASRG 549

Query: 307  KGGS----------------------GSGGSDIFK-----------IVKMIMERKFQPVI 333
            +GGS                      GS  SD FK           +V  +  +   P +
Sbjct: 550  RGGSARGGGAGRGGAGRGGSRGAGAVGSNRSDFFKRSGPNKKTWTNLVNHLKSKDLLPAV 609

Query: 334  VFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            +F FS++ CE +A  +  ++F T +E+  +    + +V  L +EDR+LP I  M  L++R
Sbjct: 610  IFVFSKKRCEDYADWLDGINFCTAKERSQIHMFVEKSVTRLKKEDRDLPQIIKMKSLVER 669

Query: 394  GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
            GIAVHH GLLP++KEL+ELLF +GL++ LFATETFAMGLN+P +TVVF+ ++K DG+S R
Sbjct: 670  GIAVHHGGLLPIVKELIELLFAKGLIRVLFATETFAMGLNLPTRTVVFSEIQKHDGNSLR 729

Query: 454  YIGSGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
             +  GE+ QM+GRAGRRG D  G  I+M     +E  + K++ LG P  L S FRL+Y  
Sbjct: 730  NLNPGEFTQMAGRAGRRGLDKTGTVIVMSYTSPLEQASFKEVALGVPTRLQSQFRLTYNM 789

Query: 513  ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEV 568
            ILNL+ R E     E +IK SF +   +  LP+   K+  L+ +  S++       E ++
Sbjct: 790  ILNLL-RIEA-LRVEEMIKYSFSENSKQTLLPEHENKIKSLQSQLDSIEFYECPHCEKDL 847

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV-NVVKKPS 627
             +     +   +  K LM+E++    V   L  GRLI  R+       G V  N+ K+  
Sbjct: 848  DKALDATIRYKECTKDLMNELSSGSSVFRVLNVGRLILFRDLNDCAKLGFVFRNLPKEGQ 907

Query: 628  AGVGTL--PS--RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDA----RQSILLAVQEL 679
              V T+  PS    G    P  LP +ST+      V  + +P +      ++I +   E+
Sbjct: 908  VVVMTITNPSTLENGQ---PNHLPYLSTIPDF---VKNNFKPFEKIEFFMENISMDSIEI 961

Query: 680  ESRFPQGLPKLNPVKDMKIEDPEVVD-----------LVNQIEELEH------KLFAHPL 722
             S F   +    P+ D+  ++PEV+D           +  ++ E ++      K+    L
Sbjct: 962  ISAFTLDV----PMTDIMKQEPEVIDKFKSEVSLIIRISRKLRETKYEKKGSLKIHQAVL 1017

Query: 723  NKSQDENQIRCFQ---------------RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRS 767
            ++ + + ++  ++               ++ E+  +I+ L   M D  +    D  + R 
Sbjct: 1018 DREKIKTELASYECSRCPNFDVHFLPKYKEFEIQRDIKSLYHLMSDQNLSLLPD-YEQRL 1076

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
             VLK  G ID +  V LKGR AC I++G EL++TEL+ +    D +  ++ AL S F+  
Sbjct: 1077 SVLKDAGFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGDFEPEEIVALLSVFVYE 1136

Query: 828  DKSSEQINLRM--ELAKPLQQLQESARKIAEIQNECKLEVNVD--EYVESTVRPFLMDVI 883
             ++ E+  L     L K   ++QE  + +  +  + ++ +  D  E++E   R  LM+V+
Sbjct: 1137 GRTREEEPLVTTPRLTKGKARIQEIYKAMLNVYEKHQVPLTKDEAEFLEKK-RFALMNVV 1195

Query: 884  YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
            Y W++G +F E+++M+   EG+I+R   RLDE   +++ A+  +G  NL  K + A E +
Sbjct: 1196 YEWARGLSFKEIMEMSVESEGTIVRVITRLDEICREVKTASIIIGNSNLHMKMSQAQELI 1255

Query: 944  RRGIMFSNSLYL 955
            +R I+F+ SLYL
Sbjct: 1256 KRDIVFAASLYL 1267


>gi|190345886|gb|EDK37851.2| hypothetical protein PGUG_01949 [Meyerozyma guilliermondii ATCC 6260]
          Length = 1248

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 346/980 (35%), Positives = 528/980 (53%), Gaps = 111/980 (11%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+ + FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 287  MAREWPFELDTFQQEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMATRNMTKAIYTSPI 346

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+R+  + FKD  VGL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 347  KALSNQKFRDFKETFKDIDVGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFV 406

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 407  IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 466

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR----------- 295
              RP PL+  ++      LY VVD +  F +  F K ++     K  GR           
Sbjct: 467  PKRPVPLEISIW--AKQHLYKVVDAQRNFSDLEFRKHKEALESGKNKGRPNVVLGPGSRG 524

Query: 296  ----------------------------RENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
                                        + + + SGR      G   +   ++V+ + + 
Sbjct: 525  GRGGTARGGNRGGGRGGGGSGRGGSNGGQVSTRPSGRAGFSRDGPNKNTWLQLVQYLKQH 584

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
               P +VF FS++ CE++A ++S +DF T +EK  +      AV  L +EDR LP I  +
Sbjct: 585  NLLPAVVFVFSKKRCEEYADTLSSVDFCTAKEKSEIHMFVDRAVSRLKKEDRELPQILKI 644

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
              LL RGIAVHH GLLP++KE +E+LF   LVK LFATETFAMGLN+P +TVVF  ++K 
Sbjct: 645  RDLLSRGIAVHHGGLLPIVKECIEILFSRTLVKVLFATETFAMGLNLPTRTVVFNQLRKH 704

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTF 506
            DG   R +  GE+ QMSGRAGRRG DD G  I+M  +E +     K++ LG P  L S F
Sbjct: 705  DGRGFRNLLPGEFTQMSGRAGRRGLDDTGTVIVMSYNEPLSPMDFKEVALGVPTKLSSQF 764

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE--AASLDASG 564
            RL+Y  ILNL+ R E     E +IK+SF +   +  LP+  K V KL +E     L+   
Sbjct: 765  RLTYNMILNLL-RIEA-LRVEEMIKHSFSENSTQSLLPEHQKTVEKLSKELQTVHLEPCS 822

Query: 565  EAEVAEYHKLKLDIAQLEKKLMSEITR-----PERVLYYLGSGRLIKVREGGTDWGWGVV 619
               + E+ +   D+ +  + +  EI R     P     YL +GRL   R+  T    G +
Sbjct: 823  VCNL-EFTEETYDLMKEYEHVYGEILRNVQQSPLLKNNYLRAGRLFCFRDEETRQRVGFL 881

Query: 620  VNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIR--------------LSVPPDLRP 665
            V V     + +      G       +LP I+T   ++              ++VP D   
Sbjct: 882  VRVSMDNDSVLLLTFDPGDNQDDVSKLPYIATKDYLQHYFGQITFNGSFKVVAVPIDKVN 941

Query: 666  LDARQSILLAVQELES-----------------RFPQGLPKLN-------PVKDMKIEDP 701
               ++ + + +++L                   RF     +L+        + ++ +   
Sbjct: 942  FIGQKMVKIYMKDLIHGNKNEIAHASAQVKTLLRFQTAWRELSFDSAVQISLHELLVRKR 1001

Query: 702  EVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
            E+V+ ++ +   E   FA  L+  Q         ++ E+  +I  L+  + D  ++   D
Sbjct: 1002 EIVEKISILRSYECPNFA--LHYKQ-------LSQQDELKTQISSLQRLISDENLELLPD 1052

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
              + R RVL+ LG IDA+  V LKGR  C I++G EL +TEL+ +    D +  ++ AL 
Sbjct: 1053 -YEQRLRVLETLGFIDANHNVGLKGRVGCEINSGWELAITELILDNFLGDFEPEEIVALL 1111

Query: 822  SCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEI--QNECKLEVNVDEYVESTV 875
            SCF+   K++++    +  R+E  K  Q++ + ++ + ++   N+  L     E++E   
Sbjct: 1112 SCFVYEGKTNDEEDPPLTPRLERGK--QKIMDISKHVLDVCSDNQIALTSEETEFLERK- 1168

Query: 876  RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
            R  LM+V+Y W++G +F E++QM+   EG+I+R   RLDE   Q+++AA  VG+  L  K
Sbjct: 1169 RFALMNVVYEWARGLSFNEIMQMSTEAEGTIVRVITRLDEICRQVKSAALIVGDSTLHSK 1228

Query: 936  FAAASESLRRGIMFSNSLYL 955
             + A E ++R I+F  SLYL
Sbjct: 1229 MSEAQERIKRDIVFCASLYL 1248


>gi|409051951|gb|EKM61427.1| hypothetical protein PHACADRAFT_156677 [Phanerochaete carnosa
            HHB-10118-sp]
          Length = 1253

 Score =  533 bits (1372), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 344/987 (34%), Positives = 532/987 (53%), Gaps = 111/987 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 279  DMAHKYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSP 338

Query: 128  LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQKYR+  Q F   +VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +
Sbjct: 339  IKALSNQKYRDFKQTFDAANVGILTGDVQINPEANCLIMTTEILRSMLYKGADLIRDVEF 398

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 399  VIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 458

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
            T  RP PL+H+++   G   + +VD +  F  + +    +   +              Q+
Sbjct: 459  TAKRPVPLEHFLY--AGRDFHKIVDAERHFVGEGYKAAGEALRRKQDKEREAAGLPPVQR 516

Query: 292  IGGRRENGKASGR--------------------MAKGGSGSGGS------DIF-KIVKMI 324
            +G R    +  GR                     A+G +GSG +      +++  ++  +
Sbjct: 517  LGARAAAPQRGGRGAPTGRGGQRGGTPARGATPAARGPTGSGRTFHQPDKNLYVHLIGNL 576

Query: 325  MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
             ++   PV+VF+FS++ CE++A +++ LD +T  EK  V  + + A+  L + DR LP I
Sbjct: 577  KKKSLLPVVVFTFSKKRCEENAGTLTNLDLSTSVEKSEVHVMIEKALSRLKDADRRLPQI 636

Query: 385  ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
              M  LL RGI VHH GLLP++KE VE+LF  GLVK LFATETFAMG+NMPAK+VVF+  
Sbjct: 637  RRMRDLLSRGIGVHHGGLLPIVKEAVEMLFARGLVKVLFATETFAMGVNMPAKSVVFSHT 696

Query: 445  KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLV 503
            +K DG S R +  GEY QM+GRAGRRG D  G  +++ ++++ E  TL+ M+LG P  L 
Sbjct: 697  RKHDGKSFREVLPGEYTQMAGRAGRRGLDATGTVVLVANDELPEQTTLQTMILGTPLKLQ 756

Query: 504  STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
            S FRL+Y  ILNL+ R E     E +IK SF +   ++ LPD  KKV +  E+  S+   
Sbjct: 757  SQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQRLLPDQQKKVIE-SEKQLSMLPK 813

Query: 564  GEAEVAEYHKLKL-----DIAQLEKKLMS--EITRPERVLYYLGSGRLIKVREGGTDWGW 616
             E ++      KL     DI +   +L+S  +  R +     L  GR++ + +G      
Sbjct: 814  LECDICRPDIEKLYDDTADIVEYNFRLLSMDDSHRSKGSKQLLQPGRVVVLVDGHFRCNI 873

Query: 617  GVVVNVVKKP--SAGV------------------------------GTLPSRGGGYIVPV 644
             VV+     P  S+GV                               T P +    +V  
Sbjct: 874  AVVLRPAPAPTTSSGVIEKAKTYEVLAVVSPDTKEGKNDVDAQAIPPTWPPKAESMLVDK 933

Query: 645  QLPLISTLSKIRLSVPPD---------------LRPLDARQSILLAVQELESRFPQGLPK 689
                 +T+S   +++  D               +  ++  + +LL+V         G+P+
Sbjct: 934  ATYEYNTVSLNSIALVTDRVVKIDFEQVATVRRITKMNEARDVLLSVIHEWIASGNGVPE 993

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
            ++     +++  E  + V   +EL  +L  +   +  D E+  +    +  +   I  LK
Sbjct: 994  VD--WKARLKAFEFQETVRARDELVKRLPGYTCRECPDFEHHYQILHGEEVLRANIAWLK 1051

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
              + D  ++   D    R  VLK L  ID +  V LKGR AC I++ +EL++TEL+   T
Sbjct: 1052 LAISDQNLELIPD-YAQRVDVLKDLKFIDQNSTVLLKGRVACEINSANELVLTELILENT 1110

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
                D  +VAAL SCFI  +K+  +  +  +L + L  +   A ++  +Q   K  V  +
Sbjct: 1111 LAAYDPEEVAALLSCFIFQEKTDVEPVIPPKLKEGLDAIVAIAERVERVQEAHK--VPGE 1168

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
            E+ +  +   L++V+Y W+KG  F ++  +TD+ EG+I+R   RLDE   ++R AA+ +G
Sbjct: 1169 EFRQLKIG--LVEVVYEWAKGMPFEQITDLTDVAEGTIVRCITRLDETCREVRDAARVIG 1226

Query: 929  EVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  L KK   A   ++R I+F+ SLY 
Sbjct: 1227 DAELFKKMEEAQLKIKRDIVFAASLYF 1253


>gi|19074168|ref|NP_584774.1| putative ATP-DEPENDENT RNA HELICASE (SKI2 SUBFAMILY)
           [Encephalitozoon cuniculi GB-M1]
 gi|19068810|emb|CAD25278.1| putative ATP-DEPENDENT RNA HELICASE (SKI2 SUBFAMILY)
           [Encephalitozoon cuniculi GB-M1]
          Length = 933

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/517 (55%), Positives = 352/517 (68%), Gaps = 48/517 (9%)

Query: 32  RNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERN 91
           RN TR   HE  VP G A T    +   F  P      AK Y FELD FQ++SV  LER+
Sbjct: 37  RNGTR---HEAVVPVGAAYT---LLPKQFCKPA-----AKNYLFELDDFQKISVCSLERD 85

Query: 92  ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTG 151
           ESVLVSAHTS+GKT VAEYAIAM+ R  QRV+YTSP+KALSNQKYREL  EF DVGLMTG
Sbjct: 86  ESVLVSAHTSSGKTVVAEYAIAMSLRSNQRVVYTSPIKALSNQKYRELLSEFSDVGLMTG 145

Query: 152 DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
           DVT++P ASCLVMTTEILR MLYRG EV++E+ W+IFDEIHYM+D+ERGVVWEE+II LP
Sbjct: 146 DVTINPTASCLVMTTEILRNMLYRGGEVVREIHWIIFDEIHYMRDKERGVVWEETIILLP 205

Query: 212 PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
             ++MVFLSAT+ NA +FAEWI H+  Q  HVVYT+ R TPL HY      + LY + D 
Sbjct: 206 KHVRMVFLSATIPNALEFAEWISHIQSQVVHVVYTEKRVTPLVHY---FRSNKLYKIKDA 262

Query: 272 KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
           K  F + NF+    +  K+ +G  RE G+A G  +                        P
Sbjct: 263 K--FHKSNFLSAMRSIRKRNVGP-REVGEAIGDAS-----------------------LP 296

Query: 332 VIVFSFSRRECEQHAMSMSKLD--FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
           V+VFSF R++CE+ AM   KLD  + T EE  TV+ +F NA+  L +EDR +P I+ +LP
Sbjct: 297 VVVFSFKRKDCERFAM---KLDGRYLTDEEARTVQTIFTNAIMSLRKEDREIPIIQNILP 353

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           LL RGI +HHSGLLP+IKE+VE+LFQEGL+K LFATETF++GLNMPAK+VVFTA+KK+DG
Sbjct: 354 LLMRGIGIHHSGLLPIIKEVVEILFQEGLLKVLFATETFSIGLNMPAKSVVFTALKKFDG 413

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
           ++ R + SGEYIQMSGRAGRRG D  GI I ++ E +       +       LVS FRL+
Sbjct: 414 EAMRLVSSGEYIQMSGRAGRRGIDSMGIVISIISEPITYKEASRLFSASSDNLVSAFRLT 473

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQ-YEKALPD 545
           Y  +LNLM R EG     ++I  SFH FQ Y+KAL +
Sbjct: 474 YNMLLNLM-RVEG-LDPLYLISRSFHHFQSYKKALAE 508



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 109/194 (56%), Gaps = 2/194 (1%)

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
           E K    VLKKL + D D  V +KGR AC I +GDEL++TE++FNG F  +       L 
Sbjct: 742 ECKKMIEVLKKLEYCD-DTTVLIKGRMACEISSGDELVLTEMIFNGDFAGIPVEHFVPLL 800

Query: 822 SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
           SC +  +  S+   L  E     + L +S  K+ ++   C +E++   Y++      LMD
Sbjct: 801 SCIVFEEWDSDSFVLSDENKLYYRLLSDSVEKVCKVLKSCGIEIDPAAYLKRFSYE-LMD 859

Query: 882 VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
           V+  W  G TF  +   T IFEGSIIR+ +RL+E L QL +AA+ +G   LE  FA    
Sbjct: 860 VVRMWVCGCTFISICSKTSIFEGSIIRTFKRLEELLRQLSSAARVIGNTELENMFALGIV 919

Query: 942 SLRRGIMFSNSLYL 955
            ++R I+F+NSLY+
Sbjct: 920 KIKRDIVFANSLYI 933


>gi|449328927|gb|AGE95202.1| putative ATP-dependent RNA helicase [Encephalitozoon cuniculi]
          Length = 933

 Score =  532 bits (1370), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 285/517 (55%), Positives = 352/517 (68%), Gaps = 48/517 (9%)

Query: 32  RNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERN 91
           RN TR   HE  VP G A T    +   F  P      AK Y FELD FQ++SV  LER+
Sbjct: 37  RNGTR---HEAVVPVGAAYT---PLPKQFCKPA-----AKNYLFELDDFQKISVCSLERD 85

Query: 92  ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTG 151
           ESVLVSAHTS+GKT VAEYAIAM+ R  QRV+YTSP+KALSNQKYREL  EF DVGLMTG
Sbjct: 86  ESVLVSAHTSSGKTVVAEYAIAMSLRSNQRVVYTSPIKALSNQKYRELLSEFSDVGLMTG 145

Query: 152 DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
           DVT++P ASCLVMTTEILR MLYRG EV++E+ W+IFDEIHYM+D+ERGVVWEE+II LP
Sbjct: 146 DVTINPTASCLVMTTEILRNMLYRGGEVVREIHWIIFDEIHYMRDKERGVVWEETIILLP 205

Query: 212 PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
             ++MVFLSAT+ NA +FAEWI H+  Q  HVVYT+ R TPL HY      + LY + D 
Sbjct: 206 KHVRMVFLSATIPNALEFAEWISHIQSQVVHVVYTEKRVTPLVHY---FRSNKLYKIKDA 262

Query: 272 KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
           K  F + NF+    +  K+ +G  RE G+A G  +                        P
Sbjct: 263 K--FHKSNFLSAMRSIRKRNVGP-REVGEAIGDAS-----------------------LP 296

Query: 332 VIVFSFSRRECEQHAMSMSKLD--FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
           V+VFSF R++CE+ AM   KLD  + T EE  TV+ +F NA+  L +EDR +P I+ +LP
Sbjct: 297 VVVFSFKRKDCERFAM---KLDGRYLTDEEARTVQTIFTNAIMSLRKEDREIPIIQNILP 353

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           LL RGI +HHSGLLP+IKE+VE+LFQEGL+K LFATETF++GLNMPAK+VVFTA+KK+DG
Sbjct: 354 LLMRGIGIHHSGLLPIIKEVVEILFQEGLLKVLFATETFSIGLNMPAKSVVFTALKKFDG 413

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
           ++ R + SGEYIQMSGRAGRRG D  GI I ++ E +       +       LVS FRL+
Sbjct: 414 EAMRLVSSGEYIQMSGRAGRRGIDSMGIVISIISEPITYKEASRLFSASSDNLVSAFRLT 473

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQ-YEKALPD 545
           Y  +LNLM R EG     ++I  SFH FQ Y+KAL +
Sbjct: 474 YNMLLNLM-RVEG-LDPLYLISRSFHHFQSYKKALAE 508



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 109/194 (56%), Gaps = 2/194 (1%)

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
           E K    VLKKL + D D  V +KGR AC I +GDEL++TE++FNG F  +       L 
Sbjct: 742 ECKKMIEVLKKLEYCD-DTTVLIKGRMACEISSGDELVLTEMIFNGDFAGIPVEHFVPLL 800

Query: 822 SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
           SC +  +  S+   L  E     + L +S  K+ ++   C +E++   Y++      LMD
Sbjct: 801 SCIVFEEWDSDNFVLSDENKLYYRLLSDSVEKVCKVLKSCGIEIDPAAYLKRFSYE-LMD 859

Query: 882 VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
           V+  W  G TF  +   T IFEGSIIR+ +RL+E L QL +AA+ +G   LE  FA    
Sbjct: 860 VVRMWVCGCTFISICSKTSIFEGSIIRTFKRLEELLRQLSSAARVIGNTELENMFALGIV 919

Query: 942 SLRRGIMFSNSLYL 955
            ++R I+F+NSLY+
Sbjct: 920 KIKRDIVFANSLYI 933


>gi|342887095|gb|EGU86725.1| hypothetical protein FOXB_02734 [Fusarium oxysporum Fo5176]
          Length = 1275

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 341/989 (34%), Positives = 528/989 (53%), Gaps = 107/989 (10%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 293  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 352

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 353  IKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 412

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 413  FDEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTP 472

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF------------VKLQDTFLKQKIGGR 295
             RP PL+HY++   G  ++ +VD +++F E  +             K  +T +  + G  
Sbjct: 473  KRPVPLEHYLW--AGKNIHKIVDSEKKFIEKGWKDAHFAIQGKDKPKPAETTVATRGGNP 530

Query: 296  RENGK------------------------------------ASGRMAKGGSGSGGSDIFK 319
            R N +                                    A G M +GG   G + + +
Sbjct: 531  RGNQRGGTQRGGPQRGGRGGGQQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQ 590

Query: 320  -------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
                   +V+ + +    P  +F FS++ CE++A ++S  DF T  EK  +  + + +V 
Sbjct: 591  DKNLWVHLVQYLKKSTLLPACIFVFSKKRCEENADALSNQDFCTAAEKSHIHMIIEKSVA 650

Query: 373  CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
             L  +DR LP I  +  LL RGIAVHH GLLP++KELVE+LF + LVK LFATETFAMGL
Sbjct: 651  RLKPDDRQLPQIIRLRELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGL 710

Query: 433  NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM----VDEQMEM 488
            N+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    +D+   +
Sbjct: 711  NLPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPV 770

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
              L++M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K
Sbjct: 771  ADLRNMILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEK 828

Query: 549  KVSKLEEEAASL--DASGEAEVA--EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRL 604
             V   + + A +  D+    +V+  E H+   D  +L  +L   +             RL
Sbjct: 829  DVKLAQADLAKVKRDSCKICDVSMDECHQASQDFKRLTFELYKGLLSIPIGRRMFSQHRL 888

Query: 605  I-----KVREGGTDWGWGVV-VNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLS 658
            +      +R  G     GV      + P+  V  + S         QLP I    K    
Sbjct: 889  VVFNWDGIRSIGILLADGVSNKGTTEDPTLHVCAIKSLRDRRDATDQLPFIPAFRKYLHE 948

Query: 659  VPPDLRPLDARQ-SILLAVQELESRFP---------QGLPKLNPVKD------------- 695
            +P   + +  +   + L+  E  +R+          QG       KD             
Sbjct: 949  LPKSKKRVQTKTLHVPLSDVECLTRWVTKGIVPEIFQGGDGYQKAKDKLQELCGSWDDRW 1008

Query: 696  -----MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD--ENQIRCFQRKAEVNHEIQQLK 748
                  +I+  ++ ++V +  EL   +   P  K  D  ++   C       +H I QLK
Sbjct: 1009 EELDLSRIKQLQLQEIVEKRVELVKTISNSPAEKCPDFLKHFAMCHDEWLIKDH-ISQLK 1067

Query: 749  SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
              + D  +Q   D  + R +VLK+LG ID    +QLKG+ AC I +GDEL++TEL+ +  
Sbjct: 1068 QSLSDQNLQLLPD-YEQRVQVLKELGFIDDATRIQLKGKVACEIHSGDELVLTELILDNV 1126

Query: 809  FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
              D +  ++AAL S F+  +K+  + +L   L +  +++   + K+ ++Q   ++  + D
Sbjct: 1127 LADYEPAEIAALLSAFVFQEKTDIEPSLTGNLERGKEKIVAISEKVNDVQTRLQVIQSAD 1186

Query: 869  EYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
            +  +   RP   +M+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE   +++ AA+ 
Sbjct: 1187 DSNDFVSRPRFGIMEVVYEWARGMSFKNITGLTDVLEGTIVRTITRLDETCREVKNAARI 1246

Query: 927  VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            VG+  L +K   A E ++R I    SLY+
Sbjct: 1247 VGDPELYQKMQQAQEMIKRDITAVASLYM 1275


>gi|21619317|gb|AAH31779.1| SKIV2L2 protein, partial [Homo sapiens]
          Length = 596

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 271/599 (45%), Positives = 391/599 (65%), Gaps = 36/599 (6%)

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           LLKRGI +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG
Sbjct: 1   LLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDG 60

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLS 509
              R+I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+
Sbjct: 61  KDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLT 120

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA 569
           Y  +LNL+ R E +   E++++ SF+QFQ+ +A+P + +KV   EE+   +    E  V 
Sbjct: 121 YNMVLNLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEESVV 178

Query: 570 EYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--- 626
            Y+K++  +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK    
Sbjct: 179 IYYKIRQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVK 238

Query: 627 -------------------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRL 657
                                    SA     P+    +G   +VPV + L+S +S +RL
Sbjct: 239 PNSGELDPLYVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRL 298

Query: 658 SVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            +P DLRP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++
Sbjct: 299 YIPKDLRPVDNRQSVLKSIQEVQKRFPDGIPLLDPIDDMGIQDQGLKKVIQKVEAFEHRM 358

Query: 718 FAHPL-NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
           ++HPL N    E      ++KA++  +I+  K +++ ++     DELK R RVL++LG  
Sbjct: 359 YSHPLHNDPNLETVYTLCEKKAQIAIDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFA 418

Query: 777 DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            +  V+++KGR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L
Sbjct: 419 TSSDVIEMKGRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKL 478

Query: 837 RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
             +LA PL+Q+QE A++IA++  E KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + 
Sbjct: 479 TEQLAGPLRQMQECAKRIAKVSAEAKLEIDEETYL-SSFKPHLMDVVYTWATGATFAHIC 537

Query: 897 QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +MTD+FEGSIIR  RRL+E L Q+  AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 538 KMTDVFEGSIIRCMRRLEELLRQMCQAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 596


>gi|344239160|gb|EGV95263.1| Helicase SKI2W [Cricetulus griseus]
          Length = 1316

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 335/964 (34%), Positives = 508/964 (52%), Gaps = 117/964 (12%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            +SFE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 233  WSFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 292

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 293  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 352

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 353  YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 412

Query: 253  LQHYVF----PVGGSGLYLVVDEKEQFREDNFVK---------------------LQDTF 287
            L+HY+F    P     L+L++D +  F    +                          T 
Sbjct: 413  LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYCAGPHAPSLCAQVLCWASRPLTLCSGTV 472

Query: 288  L------------------KQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKF 329
            L                  K+++    +   A     +GG          ++  +  R  
Sbjct: 473  LGLTPPHSVLRYYAAVEAKKERMSKHAQTFGAKQPTHQGGPAQDRGVYLSLLASLRARAQ 532

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             PV+VF+FSR  C++ A  ++ LD  T  EK  V    Q  +  L   DR LP +  M  
Sbjct: 533  LPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEVHLFLQRCLARLRGSDRQLPQVLHMSE 592

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETFAMG+NMPA+TVVF +++K DG
Sbjct: 593  LLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 652

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRL 508
             + R +  GEY+QM+GRAGRRG D  G  I++   ++ EM  L  M++GKP+ L S FRL
Sbjct: 653  STFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQSQFRL 712

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYEKALPDIGKKVSKLEEEAASLD 561
            +Y  ILNL+ R +     E ++K SF +F        +E+AL ++ K++  LEE     D
Sbjct: 713  TYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHEQALAELTKRLGALEEP----D 766

Query: 562  ASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV 620
             +G+ A++ +Y+    ++ +    +   I      L  L +GR++ V+        GV++
Sbjct: 767  VTGQLADLPDYYSWGEELTETRNMIQWRIMESVNGLKSLSTGRVVVVKNKEHHNALGVIL 826

Query: 621  NVVKKPSAGVGTL-----------PSRGGGYIVPVQLPLISTLSKIRLSVP--------- 660
             V    ++ V T              R  G   P  +P    L   +L +P         
Sbjct: 827  QVSSNSTSRVFTTLVLCDKPVVSESPRDKGPATP-DVPQPDDLVGFKLFLPEGPCEHTVA 885

Query: 661  -------------------------------PDLRPLDARQSILLAVQE---LESRFPQG 686
                                           P  R      ++  AVQE   L    P G
Sbjct: 886  KLQPGDVAAISTKVLRVNGEKIVEDFTKRQQPKFRKDPPLAAVTTAVQELLRLAQAHPSG 945

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQDENQIRCFQRKAEVNHEIQ 745
             P L+PV D++++D  VV+   +  +LE  +  A  ++  +   Q    + + ++  E++
Sbjct: 946  PPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYLKLRERMQIQKEME 1005

Query: 746  QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
            +L+  + D  +     E   R  VL+ LG++D  G V+L GR AC + +  ELL+TELMF
Sbjct: 1006 RLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMF 1063

Query: 806  NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
            +   + L   ++AAL S  +          L   L + +++++  A++I E+Q  C L  
Sbjct: 1064 DNALSTLRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVKAVAKRIGEVQVACGLNQ 1123

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
             V+E+V   +   L++V+Y W++G  F+E+  ++   EG ++R  +RL E    LR AA+
Sbjct: 1124 TVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAAR 1182

Query: 926  AVGE 929
             VGE
Sbjct: 1183 LVGE 1186


>gi|296412548|ref|XP_002835986.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629783|emb|CAZ80143.1| unnamed protein product [Tuber melanosporum]
          Length = 1195

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 339/938 (36%), Positives = 513/938 (54%), Gaps = 102/938 (10%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            +AK + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP+
Sbjct: 291  LAKEWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALATKHMTKAIYTSPI 350

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQK+R+    F+DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VIF
Sbjct: 351  KALSNQKFRDFRHVFEDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVIF 410

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE+HY+ ++ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T  
Sbjct: 411  DEVHYVNNQERGVVWEEVIIMLPEHVNLILLSATVPNPYEFASWVGRTKKKDIYVISTPK 470

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            RP PL+H+++      +Y +V+                  ++K GG +            
Sbjct: 471  RPVPLEHFIW--ANKAMYKIVNS-----------------EKKEGGHK------------ 499

Query: 309  GSGSGGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
                   +I+  +V  + +    P ++F FS++ CE++  ++S +DF+ Q EK  +  + 
Sbjct: 500  -------NIWVHLVHHLKKETLLPAVIFVFSKKRCEENVDALSAVDFSNQTEKSAIHMII 552

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            + +V  L  EDR LP I  M  LL RG+AVHH GLLP++KE+VE+LF + LVK LFATET
Sbjct: 553  EKSVARLKPEDRLLPQILRMRELLGRGLAVHHGGLLPIVKEIVEILFAKTLVKVLFATET 612

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM--VDEQ 485
            FAMGLN+P +TVVF+  +K DG S R +   EYIQM+GRAGRRG D+RGI II+  +DE 
Sbjct: 613  FAMGLNLPTRTVVFSGYRKHDGKSFRDLHPDEYIQMAGRAGRRGLDERGIVIIISPMDEA 672

Query: 486  MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
                TLK M+LG+P  L S FRL+Y  ILNL  R E     E +IK SF +   +  LP 
Sbjct: 673  PPAATLKHMLLGQPTRLQSQFRLTYNMILNLF-RVEA-LKIEEMIKRSFSENTSQTLLPK 730

Query: 546  IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEI--------TRPERVLY 597
              +KV + +E+   L    ++E  E   L +D   L  + + E+        +R      
Sbjct: 731  HEQKVQESQEKLKKL----QSEDCETCNLDIDAFVLAAEELKEVSKEIIIGGSRTTTGKK 786

Query: 598  YLGSGRLIKV-REG-----------GTDWGWGVVVNV--------VKKPSAGVGTLPSRG 637
            YL  GRL+ + ++G           G   G   VV V        VK P   +    +  
Sbjct: 787  YLTKGRLVVIGKKGDHRTIGFLATEGASGGAQAVVQVLALASKDAVKSPVDNLPFTVACS 846

Query: 638  GGYIVPVQLPLISTLSKIRL-------SVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
             G+  P        L  I +       S+   L    ARQ     V+ +E          
Sbjct: 847  MGFPAPPYEEWKLRLETIHIYEIEYLGSMVTRLDIARARQGSREEVRAIEGELKALFGNW 906

Query: 691  NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCF------------QRKA 738
            N  +  +++   V DL   +E LE++       K ++ ++ RC              +K 
Sbjct: 907  NDSEWTEVDWSRVKDLTT-LEYLEYR-----RTKEREIDRFRCLGCDNFAAHFHSSYKKY 960

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
             +  E+  LK  + D  +Q   D  + R  VLK L  ID +  VQLKGR AC I++ +EL
Sbjct: 961  LLELEVANLKHLISDQNLQLLPD-YEQRVSVLKDLDFIDENMNVQLKGRVACEINSANEL 1019

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            ++TEL+      + +  ++ AL S FI  +K+     +   L K   ++ E +R++  +Q
Sbjct: 1020 VLTELILENVLAEYEPEEIVALLSAFIFSEKTDVVPTITSRLEKGKAKIIEISRRVNRVQ 1079

Query: 859  NECKLEVNV-DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
             E ++ +   ++  ES  R  LM+V+Y W+KG +F+++  +TD+ EG+I+R+  RLDE  
Sbjct: 1080 IERQIIMAPENDDFESRPRFGLMEVVYEWAKGMSFSQITDLTDVLEGTIVRAITRLDETC 1139

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ +G+ +L  K     E ++R +    SLYL
Sbjct: 1140 REVKGAARIIGDPSLFAKMQECQELIKRDVCHCASLYL 1177


>gi|302509728|ref|XP_003016824.1| hypothetical protein ARB_05117 [Arthroderma benhamiae CBS 112371]
 gi|291180394|gb|EFE36179.1| hypothetical protein ARB_05117 [Arthroderma benhamiae CBS 112371]
          Length = 1292

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 340/988 (34%), Positives = 525/988 (53%), Gaps = 111/988 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 316  DMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 375

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 376  IKALSNQKFRDFRGTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 435

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 436  FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTP 495

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------------------- 287
             RP PL+HY++   G  +Y +VD +++F E  +    D                      
Sbjct: 496  KRPVPLEHYLW--AGKEIYKIVDSEKRFIEKGWKDADDILSGRDKVKAQKAAEAQAARSG 553

Query: 288  -----------------------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFK----- 319
                                     Q+ G  + + +  G +A+ G G G +   +     
Sbjct: 554  HQSERGRGQGQRGSGQRGTGQRGGPQQRGRGQPSARGIGNIARTGRGGGRTSAAQDRNVW 613

Query: 320  --IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
              +V+ + +R+  P  +F FS++ C ++A S+S  DF T  +K  +  V + ++  L  E
Sbjct: 614  VHLVQYLRKREMLPACIFVFSKKRCGENADSLSNQDFCTAADKSAIHMVVEKSLTRLRIE 673

Query: 378  DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
            DR+LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFATETFAMGLN+P +
Sbjct: 674  DRDLPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKILFATETFAMGLNLPTR 733

Query: 438  TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
            TVVF+  +K DG   R + +GEY QM+GRAGRRG D  G  II+    DE   + TL+ M
Sbjct: 734  TVVFSGYRKHDGRGFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSGRDEAPPITTLRKM 793

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV---- 550
            +LG P  L S FRL+Y  +LNL+ R E     E +IK SF +   +  LP+  K+V    
Sbjct: 794  ILGDPTKLRSQFRLTYNMMLNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQLSE 851

Query: 551  SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
            + LE+      A  + ++A  H+  ++  +L  +L + +           + +L+  ++ 
Sbjct: 852  ASLEKIKREPCAVCDVDLAACHQASVEYERLTVQLHTLLLASPVGKRMYAAKQLVVFKKN 911

Query: 611  GTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ--------LPLISTLSKIRLSVPPD 662
            G          V+ K     G +PS     I PV+        LP +    +    +P  
Sbjct: 912  GVR-----TAGVLMKEGVTGGPIPSLNVFEIGPVESRRFPSDILPYMPVFREYFHPLPTS 966

Query: 663  LRPLDARQSILLAVQELE----SRFPQGLPK--LNPVKD-MKIEDPEVVDLVNQI----- 710
               +   +S  + +  LE    +    G P   LN  K+ +K+ D E   L         
Sbjct: 967  PENM-VLKSCKVPIANLECVTGTTVRVGGPTWCLNIHKEALKVADKEFSKLCASWTDKSW 1025

Query: 711  --------------EELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE-------IQQLKS 749
                          E LE +     + +S    Q   F +  E+ H+       I QLK 
Sbjct: 1026 DELDWERVKDMSVREVLEQRAQQVKIARSCACLQCPQFLKHFEMQHDEWQVKENISQLKL 1085

Query: 750  KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
             M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL++TEL+     
Sbjct: 1086 LMSDQNLQLLPD-YEQRIQVLKDLGFVDEASRVQLKGKVACEIHSADELVLTELILENVL 1144

Query: 810  NDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE 869
             + +  ++ AL S F+  +K+  + NL   L    + +   + ++ ++Q + ++ ++ D+
Sbjct: 1145 AEYEPEEIVALLSAFVFQEKTENEPNLTPRLEAGKEAIIAISDRVNDLQIKHQVVLSSDD 1204

Query: 870  YVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
              +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE   +++ AA+ V
Sbjct: 1205 ANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDETCREVKNAAKLV 1264

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1265 GDPSLYNKMQLAQEMIKRDVIFAASLYL 1292


>gi|121715386|ref|XP_001275302.1| DEAD/DEAH box RNA helicase (Ski2), putative [Aspergillus clavatus
            NRRL 1]
 gi|119403459|gb|EAW13876.1| DEAD/DEAH box RNA helicase (Ski2), putative [Aspergillus clavatus
            NRRL 1]
          Length = 1292

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 365/1002 (36%), Positives = 523/1002 (52%), Gaps = 137/1002 (13%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 314  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALASKHMTKAIYTSP 373

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+   EF DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 374  IKALSNQKFRDFRTEFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 433

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 434  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTA 493

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKI--------- 292
             RP PL+HY++   G   Y +VD  ++F E      DN V  +D    QK          
Sbjct: 494  KRPVPLEHYLW--AGKDKYKIVDSNKRFIESGWKEADNIVSGRDKIKAQKAAEAQAQSQA 551

Query: 293  ----------------GGRREN----GKASGRMAKGGSGSGG-----------------S 315
                            GG R N    G   GR      G+G                  +
Sbjct: 552  QRGGQQGRGRGQAPGRGGARGNAQRGGAPRGRGQPANRGTGNIARTGRGGGRTTAAQDKT 611

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
               ++V  + +    P  +F FS++ CE++A S+S  DF    EK  +    + ++  L 
Sbjct: 612  IWVQLVGHLRKENLLPGCIFVFSKKRCEENADSLSNQDFCNATEKSLIHMFIEKSLTRLK 671

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
             EDR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P
Sbjct: 672  AEDRTLPQILRLRELLSRGIAVHHGGLLPIMKEIVEILFAKSLVKILFATETFAMGLNLP 731

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---VDEQMEMNTLK 492
             +TVVF+  +K DG   R +  GEY QM+GRAGRRG D  G  II+    DE      L+
Sbjct: 732  TRTVVFSGFRKHDGRGFRDLLPGEYTQMAGRAGRRGLDTVGYVIIVNAGRDEAPPAGALR 791

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
             M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K+V  
Sbjct: 792  KMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQL 849

Query: 553  LEEEAASLD-----------ASGEAEVAEYHKL--KLDIAQLEKKLMSEITRPERVLYYL 599
             E   A +             +      EY KL  +L +  L   +   +  P+R++ Y 
Sbjct: 850  SEASLAKIKREPCDICDIDLVACHGAAIEYEKLTSELHVGLLASPVGKRLFMPKRLIVYQ 909

Query: 600  GSGRL---IKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIR 656
              G     I VRE G   G    + V++     +G L SR     +   LP +     + 
Sbjct: 910  KDGYRTAGIIVRE-GIGGGASPSIQVLE-----IGKLGSRRHPSDI---LPFLPGFRHLL 960

Query: 657  LSVPPDLRPLDARQSIL-LAVQELE----SRFPQGLPK--LNPVKD-MKIEDPEVVDLV- 707
             S+P   R  D    +  + + +LE    +    G P   LN  K+ MK  D E+  L  
Sbjct: 961  QSLPK--RAADMNLKVCKIPLSDLECITNTMVKLGGPTWYLNIRKEAMKFADKELAKLCA 1018

Query: 708  ------------NQIEELEHKLFAHPLNKSQDENQI----RCFQ-----RKAEVNHE--- 743
                         +I+EL+ +     L K Q +  I    RC Q     +  E+ H+   
Sbjct: 1019 SWTSPVWDEMDWGRIKELQVRDI---LEKRQAQAAIAQSCRCLQCPTFLKHFEMQHDEWQ 1075

Query: 744  ----IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
                I QLK  M D  +Q   D  + R +VL+ LG ID    VQLKG+ AC I + DEL+
Sbjct: 1076 VKENISQLKQLMSDQNLQLLPD-YEQRIQVLRDLGFIDEQSRVQLKGKVACEIHSADELV 1134

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+      + +  ++ AL S F+  +K+     L   L K     +E+  +IAE  N
Sbjct: 1135 LTELVLENVLAEFEPEEIVALLSAFVFQEKTENVPTLTPRLEKG----KEAIIRIAEKVN 1190

Query: 860  ECKLEVNVDEYVE------STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            + +++  V +  E      S  R  L +V+Y W+KG +F  +  +TD+ EG+I+R+  RL
Sbjct: 1191 DLQIQYQVIQSSEDSNDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRL 1250

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            DE   +++ AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1251 DETCREVKNAAKLVGDPTLYTKMQQAQELIKRDVIFAASLYM 1292


>gi|444314577|ref|XP_004177946.1| hypothetical protein TBLA_0A06360 [Tetrapisispora blattae CBS 6284]
 gi|387510985|emb|CCH58427.1| hypothetical protein TBLA_0A06360 [Tetrapisispora blattae CBS 6284]
          Length = 1297

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 343/983 (34%), Positives = 525/983 (53%), Gaps = 114/983 (11%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 332  ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 391

Query: 130  ALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F+D  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 392  ALSNQKFRDFKETFQDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 451

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 452  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTFEFATWIGRTKQKNIYVISTP 511

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVK----LQDTFLKQKIGGRRENGKAS- 302
             RP PL   ++      L  V++EK +F   NF      L+DT  K   G + +N  ++ 
Sbjct: 512  KRPVPLVINLW--AKKELIPVINEKREFLIKNFNNHKALLEDTPSKNN-GTKNDNKNSTR 568

Query: 303  ---------------------------GRMAKGGSGSGGSDIFK-------------IVK 322
                                       G    G  GS  S  +K             ++ 
Sbjct: 569  GGSRGGSRSGSRGGSRGGSSRGNANRGGSRGAGAIGSNRSQFYKRGGSMPTKKTWPELIN 628

Query: 323  MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
             +      P ++F FS++ CE +A  +  ++F T +EK  +    + ++  L +EDR LP
Sbjct: 629  YLKSHDLLPAVIFVFSKKRCEDYADWLEGINFCTNKEKSQIHMFIEKSITRLRKEDRELP 688

Query: 383  AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
             I  +  LL+RGIAVHH GLLP++KEL+E+LF +GL++ LFATETFAMGLN+P +TVVF+
Sbjct: 689  QILKIRSLLERGIAVHHGGLLPIVKELIEILFAKGLIRVLFATETFAMGLNLPTRTVVFS 748

Query: 443  AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAP 501
             +KK DG+S RY+  GE+ QM+GRAGRRGKD  G  I+M   E  +    K++ LG P  
Sbjct: 749  EIKKHDGNSQRYLTPGEFTQMAGRAGRRGKDSTGTVIVMTYTEPFKEGNFKEVTLGIPTK 808

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  KK+ +L EE   + 
Sbjct: 809  LESQFRLTYNMILNLL-RIEA-LKVEEMIKYSFSENINQNLLPEHEKKIKQLNEEMLQIQ 866

Query: 562  A----SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWG 617
                 + +++++ +  L     +  + ++ E+ +         +GRLI  R+   +   G
Sbjct: 867  TIPCETCDSDISTFIDLVDQFKKSTENMLEELAKTSNFFRIFRTGRLIVYRDKDDNCKLG 926

Query: 618  VVV-NVVKKPSAGVGT------LPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDAR- 669
             +  + +K+ S  V T      LP        P  LP +  ++       P +   D   
Sbjct: 927  FIFRSNMKENSFVVMTISEPMKLPDGS-----PNHLPYMGNMNAYNKRNFPTVTLCDYYF 981

Query: 670  QSILLAVQELESRFPQGLP-------KLNPVKDMKIEDPEVVDLVNQIEELEHK------ 716
            + + L   EL S +   L          + +K  K E   +  + N ++E + +      
Sbjct: 982  EDVSLLSVELISAYTLKLQFQDIMKGDEDILKSFKDELFIISRVANHLKETDTEKTSSLM 1041

Query: 717  LFAHPLNKSQDENQIRCFQRKA---------------EVNHEIQQLKSKMRDSQIQKFRD 761
            +  H L ++    +IR  +  +               ++  EI+ L   M D  +    D
Sbjct: 1042 VHQHLLERNNIREKIRNLKCTSCEKLSIHYVLHYKIFQIEREIKNLSHLMSDQNLSLLPD 1101

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
              ++R  VLK  G ID +  V LKGR AC I TG EL++TEL+ +    D +  ++ AL 
Sbjct: 1102 -YESRLSVLKDAGFIDPNQNVLLKGRVACEISTGYELVLTELILDNFLGDFEPEEIVALL 1160

Query: 822  SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC-----KLEVNVD----EYVE 872
            S FI   ++ E      E   P  +L +  ++I EI  +      K +V       E++E
Sbjct: 1161 SVFIYEGRTKED-----EPPVPTPRLAKGKKRIQEIYAQMQSIYEKYQVTQTQEEAEFLE 1215

Query: 873  STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
               R  LM+V+Y W++G +F E++Q++   EG+++R   RLDE   Q++ AA  +G  NL
Sbjct: 1216 KK-RFALMNVVYEWARGLSFKEIMQISAEQEGTVVRVITRLDEVCRQVKTAAVIIGNSNL 1274

Query: 933  EKKFAAASESLRRGIMFSNSLYL 955
              K + A E ++R I+F+ SLYL
Sbjct: 1275 HTKMSQAQELIKRDIVFAASLYL 1297


>gi|350855162|emb|CCD58128.1| helicase, putative [Schistosoma mansoni]
          Length = 850

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 307/859 (35%), Positives = 487/859 (56%), Gaps = 106/859 (12%)

Query: 194 MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
           M+++ERGV+WEE+II LP ++ +VFLSAT+ NA +FAEWI  LH++PCHVVYTD RP PL
Sbjct: 1   MREKERGVIWEETIILLPDSVGLVFLSATIPNAREFAEWIVFLHRKPCHVVYTDCRPVPL 60

Query: 254 QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG 313
           QHYV+P GG G++LVV++  +F E NF  L    L+   G    + K+ GR   GGS   
Sbjct: 61  QHYVYPCGGDGIHLVVNQNREFIESNF-NLALNTLQNAAGNSISDTKSRGR--NGGSTRP 117

Query: 314 GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                K+VK++M++  +P+IVFSFS+ +CE +AM ++K+DF+T+ EK  +E VF NA++ 
Sbjct: 118 QPYCSKLVKLVMDQNLEPLIVFSFSKMDCEFYAMQLNKMDFSTESEKAAIELVFNNAIES 177

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L+ +DRNLP ++++LP+L+RGI +HH GLLP++KE+VE+LF EG +K L+ATETFAMGLN
Sbjct: 178 LSVDDRNLPQVQILLPVLRRGIGIHHGGLLPILKEIVEVLFAEGFIKVLYATETFAMGLN 237

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
           MPA++V+FT+ +K+DG   R +  GEYIQMSGRAGRRGKD RG  I+M+D+++  +  + 
Sbjct: 238 MPARSVLFTSTRKFDGRDFRLLSPGEYIQMSGRAGRRGKDTRGTVIMMLDDRISADEARR 297

Query: 494 MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
           ++LG+P  L S+F L+   ILNL+ R E     E ++  +F QFQ    LP + K+++  
Sbjct: 298 LLLGEPDRLDSSFYLTNNMILNLL-RVE-DINPEIMLVKNFQQFQCRSELPYLEKRLNDT 355

Query: 554 EEEAASLDASGEAEVAE---YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE- 609
           E    ++    + ++ +   Y KL   +A  E +  + +++ + V+ +  +GR++++R  
Sbjct: 356 ESLIKNICFPEDIDMGQLGAYVKLHHAVAVCEAERWALVSQRKSVIPFFQAGRVVRIRNL 415

Query: 610 GGTDWGWGVVVNV-------------------------------------VKKPSAGVGT 632
              D+GWG+VV+V                                      +KP      
Sbjct: 416 DDWDFGWGIVVHVDRSDSPITHSGHQKSNRMSVICLMEVAEDHILRNSDSTRKPIPFSFV 475

Query: 633 LPSRGGGY----------IVPVQLPLISTLSKI--------------------RLSVPPD 662
            P+ G  +          +V V L  +S +S +                    +LSV PD
Sbjct: 476 KPADGVDFQTDTFTSVIQLVSVPLDCLSGISSVCLKLNSLLECDNQNTEQLCNKLSVQPD 535

Query: 663 LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
                 ++ I   V   +++    LP L+P+KD+ I+D  V      I  L+ ++  +P+
Sbjct: 536 ----HVKRRIWEGVDRAKAKLGGILPVLDPIKDLNIKDDRVKQQCEAINLLKARMAMNPI 591

Query: 723 NKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
           +K  D ++ I  F  KA    +++ ++ ++  +      DEL+ R R+L++L     D  
Sbjct: 592 SKRADLDSLIDRFNWKASNLRKLEDIRERISRTDSLSHFDELRARKRLLRRLCFCSEDDT 651

Query: 782 VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMEL 840
           V LKGR AC I TGDEL++TEL+ +G F+     Q+A + SCF+   ++    INL   +
Sbjct: 652 VALKGRIACEISTGDELMLTELLLDGFFSQFSPVQLAGVMSCFVAEKQTKHHMINLSPVM 711

Query: 841 AKPLQQLQESARKIAEIQNECKLEV---NVDEYVESTVRPF------------------- 878
            K ++ + + AR +A++  EC +     N ++ + + V+                     
Sbjct: 712 KKAIKTIHDKARYLAKMSAECNINTGHSNSEKQLTTLVQNLENNRNNLLDDEQAYVDRFV 771

Query: 879 --LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
             LMDV+  W++G +F+ + ++T  FEGS+IR  RRL+E L Q+  AA+  G   LE KF
Sbjct: 772 GDLMDVVCAWAEGVSFSRLCELTSAFEGSVIRCIRRLEELLCQMHNAAKVAGNSELENKF 831

Query: 937 AAASESLRRGIMFSNSLYL 955
             A   ++R I+F  SLYL
Sbjct: 832 LEAVILIKRDIIFCASLYL 850


>gi|156847381|ref|XP_001646575.1| hypothetical protein Kpol_1055p74 [Vanderwaltozyma polyspora DSM
            70294]
 gi|156117253|gb|EDO18717.1| hypothetical protein Kpol_1055p74 [Vanderwaltozyma polyspora DSM
            70294]
          Length = 1274

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 346/980 (35%), Positives = 534/980 (54%), Gaps = 112/980 (11%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 313  ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 372

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F D+  GL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 373  ALSNQKFRDFKETFDDIEIGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 432

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 433  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 492

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQ-------------DTFLKQKIGG 294
             RP PL+  ++    + L  V++ K +F E NF K +             D       GG
Sbjct: 493  KRPVPLEINIW--AKNTLIPVINSKREFLEANFKKHKQLIEGVPSSSKPDDKKTNNSRGG 550

Query: 295  RRENGKASGRMAKGGS----------------GSGGSDIFK-----------IVKMIMER 327
                G   G   +GGS                GS  S  F+           I+  +  R
Sbjct: 551  SIRGGSRRGGSTRGGSSTRGNALSGSRGAGAVGSNKSKFFRRGGPNKKTWPDIINFLKGR 610

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
            +  PV++F FS++ CE +A  +  L+F    EK  +    + ++  L +EDR LP I  +
Sbjct: 611  ELLPVVIFVFSKKRCEDYADYLESLNFCNNREKSQIHMFIEKSITRLKKEDRELPQILKI 670

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
              LL+RGIAVHH GLLP++KEL+E+LF +GL++ LFATETFAMGLN+P +TV+F+ ++K 
Sbjct: 671  RSLLERGIAVHHGGLLPIVKELIEILFSKGLIRVLFATETFAMGLNLPTRTVIFSEIQKH 730

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTF 506
            DG   R +  GE+ QM+GRAGRRG DD G  I+M  ++ ++  + K++ LG P  L S F
Sbjct: 731  DGVGLRDLNPGEFTQMAGRAGRRGLDDTGTVIVMAYNDPLQSLSFKEVTLGVPTKLESQF 790

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA 566
            +L+Y  ILNL+ R E     E +IK SF +   +  LP+  KK+ +L+E  +++     A
Sbjct: 791  KLTYNMILNLL-RIEA-LKVEEMIKYSFSENTKQTLLPEHEKKIKELQESLSAIKDIDCA 848

Query: 567  EVAEYHKLKLD----IAQLEKKLMSEITRPERVLYYLGSGRLIKVR--EGGTDWGWGVVV 620
               ++    L+     +++   +M E+T+   V Y L +GRLI  R  +G    G+ +  
Sbjct: 849  VCGDHLDSFLNDSIRYSEVTANMMEELTKTGAVFYVLKAGRLILFRDIDGSAKLGF-IYS 907

Query: 621  NVVKKPSAGVGTLPSRG---GGYIVPVQLPLISTLSKI-------RLSVPPDLRPLDARQ 670
            N VK  +  V +  S      G   P  LP +S++++          S+P  +  +    
Sbjct: 908  NNVKAATLRVISFTSPNILPNGQ--PNHLPYLSSIAQYCNRYFNKFKSIPFTIEEISVSA 965

Query: 671  SILLAVQELESRF-------PQGLPKLN-----------PVKDMKIED-------PEVVD 705
              +++   L+  F       P+ + KL+            +K+ K E          +V+
Sbjct: 966  IEIVSPLVLKVPFTQIINGEPEAMAKLHEEIKVVLRIAPKLKESKTEKRGNLKVHQSLVE 1025

Query: 706  LVNQIEELEHK-------LFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
              N  E LE+        L++H   K           +K  +  EI+ L   M D  +  
Sbjct: 1026 RANIKERLENSEVLKCDDLYSHFEPK----------YKKFMIEKEIKGLYHLMSDQNLNL 1075

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              D  K R  VLK  G ID +  V LKGR AC I++G EL++TEL+ +    D +  ++ 
Sbjct: 1076 LPDYEK-RLSVLKATGFIDQNHNVMLKGRVACEINSGYELVITELILDNFLGDFEPEEIV 1134

Query: 819  ALASCFI--PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
            AL S FI     K  E       LAK  ++++E  +K+  +    ++ +  +E     ++
Sbjct: 1135 ALLSVFIYEGRTKDEEPPIGTPRLAKGKKKIEEIYKKMLNVYEAEQIPLTREEAEFLDMK 1194

Query: 877  PF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
             F LM+V+Y W++G +F E+++++   EG+++R   RLDE   Q++ AA  +G  NL +K
Sbjct: 1195 RFALMNVVYEWARGLSFKEIMEISVEQEGTVVRVITRLDEICRQVKTAAIIIGNSNLHQK 1254

Query: 936  FAAASESLRRGIMFSNSLYL 955
               A E ++R I+F+ SLYL
Sbjct: 1255 MTQAQELIKRDIVFAASLYL 1274


>gi|68479463|ref|XP_716263.1| hypothetical protein CaO19.6425 [Candida albicans SC5314]
 gi|68479634|ref|XP_716180.1| hypothetical protein CaO19.13783 [Candida albicans SC5314]
 gi|46437839|gb|EAK97179.1| hypothetical protein CaO19.13783 [Candida albicans SC5314]
 gi|46437927|gb|EAK97266.1| hypothetical protein CaO19.6425 [Candida albicans SC5314]
          Length = 1245

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 349/986 (35%), Positives = 526/986 (53%), Gaps = 121/986 (12%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 282  MARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKCIYTSPI 341

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 342  KALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFV 401

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 402  IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 461

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN-------- 298
              RP PL+  +F    + L+ VVD   +F+E+ F K +D       GG ++N        
Sbjct: 462  PKRPVPLE--IFVSAKNQLFKVVDANRRFQENEFRKHKDLLE----GGGKKNELPSTTMG 515

Query: 299  ---------------------------------GKASGRMAKGGSGSGGSDIFKIVKMIM 325
                                             G  SG    G  G   +    +V  + 
Sbjct: 516  SGSRGGPGGTARGGNRGGRGGRGGQGRGGNANRGNFSGPKRFGRDGPKKNTWIDLVNYMK 575

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
                 P +VF FS++ CE++A S+  +DFN   EK  +      AV  L +EDR LP I 
Sbjct: 576  SNNLLPAVVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLKKEDRELPQIL 635

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +  +L RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TV+F++++
Sbjct: 636  KIREMLGRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVIFSSMR 695

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVS 504
            K DG S R +  GE+ QMSGRAGRRG D  G  I+M  D+ +     K++VLG P  L S
Sbjct: 696  KHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYDDPLSPTDFKEVVLGTPTKLSS 755

Query: 505  TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG 564
             FRL+Y  ILNL+ R E     E +IK+SF +   +  LP+  K+  +++++  S   + 
Sbjct: 756  QFRLTYSMILNLL-RIEA-LKVEEMIKHSFSENSTQVLLPENQKRYDEIKKQLQSSTITP 813

Query: 565  EAEVA-----EYHKLKLDIAQLEKKLMSEITR-PERVLYYLGSGRLIKVREGGTDWG-WG 617
             ++ +     E   L  +   L  + + +I + P      L  GRL+  R+   +    G
Sbjct: 814  CSKCSLEGTEETCNLLTEYENLYGECVVDIHKSPVLKSQLLRVGRLVCFRDVNHNGARMG 873

Query: 618  VVVNVVKKPSAGVGTLPSRGGGY----------IVPVQLPLISTLSKIRLS-------VP 660
             VV      +A V      G  Y           +P++  +     KI+ S       VP
Sbjct: 874  FVVKSDSANNAIVLLTFDHGKDYEEAIEKYKLPYIPIRDYITKNFPKIKFSGRLRVVLVP 933

Query: 661  PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV----NQIEELEHK 716
             +      R S+  +V  +          +N  K    E  E + ++    N  EEL  K
Sbjct: 934  YENICFIGRYSLKTSVNSI----------INNEKSAVQEASEQIQILTKYQNSFEELAFK 983

Query: 717  ----LFAHPLNKSQDENQIRCFQRKAEV-----------------NHEIQQLKSKMRDSQ 755
                L  H L   +D+   +    KA V                 + E+++L+  + D  
Sbjct: 984  FTRQLSLHDLTVEKDQLLEKLKSSKAYVCPNFRQHYVEYLDRYLLSQEVEKLERLISDEN 1043

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            ++   D  + R +VL+ +G+ID    V LKGR AC +++G EL++TEL+ N    D +  
Sbjct: 1044 LELLPD-YEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELIITELVLNNFLGDFEPA 1102

Query: 816  QVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE-- 869
            ++ AL SCF+   ++ E+    I  R+E  K   ++ E A K+ ++  E ++ +  +E  
Sbjct: 1103 EIVALLSCFVYEGRTQEEEPPLITPRLEKGK--AKILEIAEKLLKVYVEKQVSLTSEEED 1160

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            +VES  R  L +V+Y W+ G +F E++Q++   EG+I+R   RLDE   +++ AA  +G+
Sbjct: 1161 FVESK-RFALANVVYEWANGLSFNEIMQISVEAEGTIVRVITRLDEICREVKNAALIIGD 1219

Query: 930  VNLEKKFAAASESLRRGIMFSNSLYL 955
              L  K   A E ++R I+F  SLYL
Sbjct: 1220 STLHLKMVEAQEKIKRDIVFCASLYL 1245


>gi|238880251|gb|EEQ43889.1| antiviral helicase SKI2 [Candida albicans WO-1]
          Length = 1246

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 349/986 (35%), Positives = 527/986 (53%), Gaps = 121/986 (12%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 283  MARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKCIYTSPI 342

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR +LYRG++++++V +V
Sbjct: 343  KALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSILYRGADLIRDVEFV 402

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 403  IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 462

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN-------- 298
              RP PL+  +F    + L+ VVD   +F+E+ F K +D       GG ++N        
Sbjct: 463  PKRPVPLE--IFVSAKNQLFKVVDANRRFQENEFRKHKDLLE----GGGKKNELPSTTMG 516

Query: 299  ---------------------------------GKASGRMAKGGSGSGGSDIFKIVKMIM 325
                                             G  SG    G  G   +    +V  + 
Sbjct: 517  SGSRGGPGGTARGGNRGGRGGRGGQGRGGNANRGNFSGPKRFGRDGPKKNTWIDLVNYMK 576

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
                 P +VF FS++ CE++A S+  +DFN   EK  +      AV  L +EDR LP I 
Sbjct: 577  SNNLLPAVVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLKKEDRELPQIL 636

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +  +L RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TV+F++++
Sbjct: 637  KIREMLGRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVIFSSMR 696

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVS 504
            K DG S R +  GE+ QMSGRAGRRG D  G  I+M  D+ +     K++VLG P  L S
Sbjct: 697  KHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYDDPLSPTDFKEVVLGTPTKLSS 756

Query: 505  TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG 564
             FRL+Y  ILNL+ R E     E +IK+SF +   +  LP+  K+  +++++  S   + 
Sbjct: 757  QFRLTYSMILNLL-RIEA-LKVEEMIKHSFSENSTQVLLPENQKRYDEIKKQLQSSTITP 814

Query: 565  EAEVA-----EYHKLKLDIAQLEKKLMSEITR-PERVLYYLGSGRLIKVREGGTDWG-WG 617
             ++ +     E   L  +   L  + + +I + P      L  GRL+  R+   +    G
Sbjct: 815  CSKCSLEGTEETCNLLTEYENLYGECVVDIHKSPVLKSQLLRVGRLVCFRDVNHNGARMG 874

Query: 618  VVVNVVKKPSAGVGTLPSRGGGY----------IVPVQLPLISTLSKIRLS-------VP 660
             VV      +A V      G  Y           VP++  +     KI+ S       VP
Sbjct: 875  FVVKSDSANNAIVLLTFDHGKDYEEAIEKYKLPYVPIRDYITKNFPKIKFSGRLRVVLVP 934

Query: 661  PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV----NQIEELEHK 716
             +      R S+  ++  +          +N  K    E  E + ++    N  EEL  K
Sbjct: 935  YENVCFIGRYSLKTSINSI----------INNEKSAVQEASEQIQILTKYQNSFEELAFK 984

Query: 717  ----LFAHPLNKSQDENQIRCFQRKAEV-----------------NHEIQQLKSKMRDSQ 755
                L  H L   +D+   +    KA V                 + E+++L+  + D  
Sbjct: 985  FTRQLSLHDLTVEKDQLLEKLKSSKAYVCPNFRQHYVEYLDRYLLSQEVEKLERLISDEN 1044

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            ++   D  + R +VL+ +G+ID    V LKGR AC +++G EL++TEL+ N    D +  
Sbjct: 1045 LELLPD-YEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELIITELVLNNFLGDFEPA 1103

Query: 816  QVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE-- 869
            ++ AL SCF+   ++ E+    I  R+E  K   ++ E A K+ ++  E ++ +  +E  
Sbjct: 1104 EIVALLSCFVYEGRTQEEEPPLITPRLEKGK--AKILEIAEKLLKVYVEKQVSLTSEEED 1161

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
            +VES  R  L +V+Y W+ G +F E++Q++   EG+I+R   RLDE   +++ AA  +G+
Sbjct: 1162 FVESK-RFALANVVYEWANGLSFNEIMQISVEAEGTIVRVITRLDEICREVKNAALIIGD 1220

Query: 930  VNLEKKFAAASESLRRGIMFSNSLYL 955
              L  K A A E ++R I+F  SLYL
Sbjct: 1221 STLHLKMAEAQEKIKRDIVFCASLYL 1246


>gi|134083367|emb|CAK97360.1| unnamed protein product [Aspergillus niger]
          Length = 1262

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 345/975 (35%), Positives = 523/975 (53%), Gaps = 112/975 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAI++A +   + IYTSP
Sbjct: 313  DMAREWPFELDTFQKEAVYHLECGDSVFVAAHTSAGKTVVAEYAISLAAKHMTKAIYTSP 372

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+   EF DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 373  IKALSNQKFRDFRTEFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 432

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 433  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTA 492

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------NGK 300
             RP PL+HY++   G G Y +VD  ++F E+ + +  +      I GR +         +
Sbjct: 493  KRPVPLEHYLW--AGKGKYKIVDSNKRFLENGWKEADEI-----ISGRDKLKAQKAAEAQ 545

Query: 301  ASGRMAKGGS---------------------GSGGSDIFKIVKMIMERKFQPVIVFSFSR 339
            A  + ++GG+                         +   ++V  + +    P  +F FS+
Sbjct: 546  AQSQASRGGAPQGRGRGQAGGRGRGGGRTTAAQDKTVWVQLVGHLRKENLLPGCIFVFSK 605

Query: 340  RECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHH 399
            + CEQ+A S+S  DF+T  EK  +    + ++  L  EDR LP I  +  LL RGIAVHH
Sbjct: 606  KRCEQNADSLSNQDFSTASEKSLIHMFIEKSLTRLKPEDRTLPQILRLRELLSRGIAVHH 665

Query: 400  SGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGE 459
             GLLP++KE+VE+LF + LVK LFATETFAMGLN+P +TVVF+  +K DG   R +  GE
Sbjct: 666  GGLLPIMKEIVEILFAKSLVKVLFATETFAMGLNLPTRTVVFSGFRKHDGKGFRDLLPGE 725

Query: 460  YIQMSGRAGRRGKDDRGICIIM---VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            Y QM+GRAGRRG D+ G  II+    DE      L+ M+LG P  L S FRL+Y  ILNL
Sbjct: 726  YTQMAGRAGRRGLDNVGYVIIVNAGRDEAPPAGALRKMILGDPTKLRSQFRLTYNMILNL 785

Query: 517  MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD-----------ASGE 565
            + R E     E +IK SF +   +  LP+  K+V   E   A +            A+  
Sbjct: 786  L-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQLSEASLAKIKREPCDICDIDLAACH 843

Query: 566  AEVAEYHKL--KLDIAQLEKKLMSEITRPERVLYYLGSG---RLIKVREGGTDWGWGVVV 620
            A   EY KL  +L +  L   +   +  P+R++ Y   G     + VREG +  G    +
Sbjct: 844  AAAIEYEKLTSELHVGLLSSPVGKRLFVPKRLIVYRKEGFRTAGVIVREGVSG-GQTPSI 902

Query: 621  NVVKKPSAG------------------VGTLPSRGG-----GYIVPVQLPLISTLSKIRL 657
             V++    G                  + TLP+R        Y VP+      T + ++L
Sbjct: 903  QVLEIGRLGHKRHPSDILPFLPMFKHLLQTLPTRAADMALKSYKVPLLDLECVTNTLVKL 962

Query: 658  SVPPDLRPLDARQSILLAVQELESRFPQGL-PKLNPVKDMKIEDPEVVDLVNQIEE---- 712
              P     +  +++   A +EL         P  + +   +I++ +V D++ + ++    
Sbjct: 963  GGPTWYLNI-KKEASKFADKELTKHCASWTSPVWDEIDWARIKELQVRDILEKRQQQASI 1021

Query: 713  ------LEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNR 766
                  L+   F        DE Q++           I QLK  M D  +    D  + R
Sbjct: 1022 AQGCKCLQCPSFLKHFEMQHDEWQVK---------ENISQLKQLMSDQNLALLPD-YEQR 1071

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             +VLK+LG +D    VQLKG+ AC I + DEL++TEL+      + +  ++ AL S F+ 
Sbjct: 1072 IQVLKELGFVDEQSRVQLKGKVACEIHSADELVLTELILENVLAEYEPEEIVALLSAFVF 1131

Query: 827  VDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE------STVRPFLM 880
             +K+     L   L K     +E+  +I++  N+ +++  V +  E      S  R  L 
Sbjct: 1132 QEKTENVPTLTPRLEKG----KEAIVRISDRVNDFQIQHQVIQTSEDSNDFASQPRFGLA 1187

Query: 881  DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
            +V+Y W+KG +F  +  +TD+ EG+I+R+  RLDE   +++ AA+ VG+  L  K   A 
Sbjct: 1188 EVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDETCREVKNAAKLVGDPTLYTKMQQAQ 1247

Query: 941  ESLRRGIMFSNSLYL 955
            E ++R ++F+ SLY+
Sbjct: 1248 EQIKRDVIFAASLYM 1262


>gi|323507909|emb|CBQ67780.1| probable SKI2-antiviral protein and putative helicase [Sporisorium
            reilianum SRZ2]
          Length = 1288

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 349/991 (35%), Positives = 510/991 (51%), Gaps = 122/991 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA ++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 317  QMAHSFPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIALAQKHMTRCIYTSP 376

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQKYR+  Q F   +VG++TGDV ++P A CL+MTTEILR MLYRGS+++++V +
Sbjct: 377  IKALSNQKYRDFKQTFGAANVGILTGDVQINPEAPCLIMTTEILRSMLYRGSDLIRDVEF 436

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D+ERGVVWEE II  P  I ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 437  VIFDEVHYVNDQERGVVWEEVIILCPQHINLILLSATVPNTKEFADWVGRTKKKDIYVIS 496

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------- 297
            T  RP PL+H+++   G  ++ +VD + QF     +K     LK+K    RE        
Sbjct: 497  TPKRPVPLEHFLY--AGKEMFKIVDARAQFLGTG-IKAAGEALKRKQEKEREANAAAGGG 553

Query: 298  -------------NGKASGRM--AKGGSGSGGSDI-----------------------FK 319
                         N +  G M  A+G +  G                             
Sbjct: 554  AARGGRGGGAAGSNSRGRGGMTPARGAAPRGRGGAVGGRGGGYTGTTTVRTGLDKNLWIH 613

Query: 320  IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
            +V  + +    P +VF FS++ CE++A SM   D NT ++K  V  + + ++  L   D+
Sbjct: 614  LVGNLRKNNLLPCVVFVFSKKRCEEYATSMPNTDLNTAKDKSEVHILIEKSLTRLKGSDK 673

Query: 380  NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
             LP I+ M  LL RGI VHH GLLP++KE+VELLFQ GLVK LFATETFAMG+NMPA++V
Sbjct: 674  ELPQIKRMRDLLGRGIGVHHGGLLPIVKEIVELLFQRGLVKVLFATETFAMGVNMPARSV 733

Query: 440  VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGK 498
            VF++++K DG   R +  GEY QMSGRAGRRG D  G+ II   +Q+ E   L  M+LG+
Sbjct: 734  VFSSIRKHDGHGFRELLPGEYTQMSGRAGRRGLDATGVVIINAADQLPETAVLHKMLLGQ 793

Query: 499  PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
            P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  ++  +LE++ A
Sbjct: 794  PTKLQSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENAAQKMLPDQQRRAQELEKKLA 851

Query: 559  SLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL-----------GSGRLIKV 607
                    E+ E      D       L + +    + L+ L            +GR++ V
Sbjct: 852  KAQHPQPPELDEQLSTLYD-------LCAAVVASNQALFELALAHQQGAKNFAAGRVVIV 904

Query: 608  REGGTDWGWGVVVNVVK----------KPSAGVGTLPSR---GGGYIVPVQLPLISTLSK 654
            R+   ++   V+V  V            P    G L  R   G   + P+  P ++T+  
Sbjct: 905  RDEHFEFDMAVIVRQVSAGEFLVLAAVTPERKRGELDVRVEEGSSGVAPLWPPRVATVED 964

Query: 655  IRLSVPPDLR--PLDARQSILLAVQELE---------SRFPQGLPKLNPVKDMKIEDPEV 703
              L    DLR  PL +   +   V +L+         S   + L  L P++      P  
Sbjct: 965  AELVY--DLREVPLRSIAHVTDQVVKLDVALVTAHRISAMNRALEALLPIRASFAAAPAG 1022

Query: 704  VDLVNQIEELEHKLFAHPLNKSQDENQIRCFQ------------------RKAEVNHEIQ 745
                    +L    F   L +S+D    +  Q                  R   + H ++
Sbjct: 1023 GMREADWTKLRRLDFQEAL-RSRDSYAAKTTQHVHLLASPAFAANYTLVARYKSITHALE 1081

Query: 746  QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA-DGVVQLKGRAACLIDTGDELLVTELM 804
            Q      D  ++   D    R  VLK L +ID     V LKGR AC +++ +EL++TEL+
Sbjct: 1082 QTLRLQSDENLELLPD-YHQRVAVLKTLRYIDPLTESVLLKGRVACEVNSANELVLTELI 1140

Query: 805  FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
                  D +   + AL S F+  +K+ +   L   L +    + E A +++ +Q    L 
Sbjct: 1141 LENVLTDYEPEHLVALLSIFVAHEKTDDIPVLEGRLLQGYHTILEVAERVSRVQLSNSL- 1199

Query: 865  VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
                E      +  L+ V+Y W++G  FA +  MTDI EGSI+R   RLDE   ++R AA
Sbjct: 1200 --ASEDFSVASKTALVPVVYEWARGTDFATIAAMTDIQEGSIVRVITRLDETCREIRDAA 1257

Query: 925  QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + +G+ +L +K       +RR I+F+ SLY 
Sbjct: 1258 RVIGDRDLGEKIQTCQTLIRRDIVFAASLYF 1288


>gi|145341527|ref|XP_001415858.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144576081|gb|ABO94150.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1175

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 341/977 (34%), Positives = 520/977 (53%), Gaps = 96/977 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A  + FELD FQ+ ++  LE++E+V V+AHTSAGKT VAEYA A+A +   R IYTSP
Sbjct: 206  EPAHDFPFELDLFQKEAIVHLEKSENVFVAAHTSAGKTVVAEYAFALATKHCTRAIYTSP 265

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQK+R+  + F DVGL+TGDV++ P A+CL+MTTEILR MLYRG++++++V WVI
Sbjct: 266  IKTISNQKFRDFGKMF-DVGLLTGDVSIKPEAACLIMTTEILRSMLYRGADLIRDVEWVI 324

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++   V  T 
Sbjct: 325  FDEVHYVNDAERGVVWEEVIIMLPAHVGLILLSATVPNVFEFADWVGRTKRKKIFVTGTK 384

Query: 248  FRPTPLQHYVFPVGGSGL--YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-----NGK 300
             RP PL+H ++  GG     +  V E E F    +    D   K+ +G +       N +
Sbjct: 385  KRPVPLEHCIY-FGGDKEKDFYKVGEHEAFLPTGYKVASDAHKKKLLGNKTTTATPANAQ 443

Query: 301  ASGRMA---------------------------KGGSGS-----GGSD---IFKIVKMIM 325
            A+ + A                            GG GS      G D     ++++ + 
Sbjct: 444  AAKQTALAGRGGRGGAQQGRGGRVGGRGGTQNVTGGRGSSFGPNAGRDKNMWVELIRNLE 503

Query: 326  ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
             R+  P++VF+FS++ C+    S++ +D  +  EK  +    + A+  L+  DR LP + 
Sbjct: 504  RRELLPMVVFAFSKKRCDTLVDSLTSMDLTSSSEKHEIHVFCERALSRLSVTDRKLPQVL 563

Query: 386  LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
             +  LL+RG+ VHH+GLLP++KE+VE+LF  GL+K L+ TETFAMG+N PA+ V F +++
Sbjct: 564  RVRELLRRGLGVHHAGLLPIVKEIVEMLFCRGLLKVLYCTETFAMGVNAPARCVCFQSLR 623

Query: 446  KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT-LKDMVLGKPAPLVS 504
            K DG   R + SGEY QM+GRAGRRG D  G  I+   E       L+ ++ G+   L S
Sbjct: 624  KHDGQDFRGLLSGEYTQMAGRAGRRGLDTVGTVILAAWENFPPELELRQLLSGQATKLQS 683

Query: 505  TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD----------IGKKVSKLE 554
             FRL+Y  ILNLM R E     E ++  SF +F  ++++ D            +KV  L 
Sbjct: 684  QFRLTYGMILNLM-RVE-DLRVEDMLARSFAEFHAQRSVIDRRGDLAIDTAALRKVESLM 741

Query: 555  EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR---EGG 611
            +  A        +   +     +IA+  + +   I         L  GR++ V    EGG
Sbjct: 742  QTEAQFSPDEWQKAVHWDDHAREIARSVEHVREAIMTSRGAQNALSPGRVLLVAPEGEGG 801

Query: 612  TDWGW---------GVVVNVVKKPSAGV-----GT--------LP--SRGGG--YIVP-V 644
                           V++ VV   + G      GT        LP   + GG  YIV  V
Sbjct: 802  ESVDGLPRGGVAKHCVLLRVVTSATNGKSFVRGGTTSNKMPDGLPWFRQAGGIDYIVASV 861

Query: 645  QLPLISTLSKIRLSVPPDL-----RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE 699
                I  ++  RLSV  D        + A    LL++++L S        L+P+KD+KI+
Sbjct: 862  PETAILAITTSRLSVEADAILDGSGDVAATSRALLSMEKLSSE--TSFEALHPLKDLKIQ 919

Query: 700  DPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEV-NHEIQQLKSKMRDSQIQK 758
            D   V+      +L   L   P+  +Q   +     R   V    + +L+  + D+ + +
Sbjct: 920  DIVTVEACQHHADLVKSLPPRPVASAQKLREWSALLRAKHVLTSRVAELEFGLSDANLLQ 979

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              D  + R  VL+++G++D +  V LKGR AC I TGDEL+ TE++F G   D+   +  
Sbjct: 980  MPD-FEARVAVLQRMGYLDENRTVTLKGRVACEIATGDELVGTEIIFAGVLTDIPSEEAV 1038

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
            AL +  +  +K++   NL   L     + +E A    EIQ    L +  DE+VE+T+R  
Sbjct: 1039 ALLAALVFQEKNASPPNLEGSLKAACDRAKELAFAAGEIQMAHGLPIAPDEFVETTMRFG 1098

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            L +V+Y W++G  FA++ Q+TD+ EGS++R+  RLDE    +R AA+ +G+  L  K   
Sbjct: 1099 LSEVVYEWARGTPFADICQLTDVQEGSVVRTIVRLDEMCRDVRNAARIMGDSTLFAKMEE 1158

Query: 939  ASESLRRGIMFSNSLYL 955
            AS +++R I+FS SLY+
Sbjct: 1159 ASAAIKRDIVFSASLYV 1175


>gi|336268634|ref|XP_003349081.1| hypothetical protein SMAC_06856 [Sordaria macrospora k-hell]
 gi|380093707|emb|CCC08671.1| unnamed protein product [Sordaria macrospora k-hell]
          Length = 1294

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 341/1000 (34%), Positives = 538/1000 (53%), Gaps = 133/1000 (13%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 316  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 375

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 376  IKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 435

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 436  FDEVHYVNDYERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKQKDIYVISTP 495

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE-------------DNFVKLQDTFLKQKIGG 294
             RP PL+HY++   G  ++ +VD +++F E             D   K  +       GG
Sbjct: 496  KRPVPLEHYLW--AGKKIHKIVDAEKKFLETGWKEANLSIQGKDKPPKAIEAPTGPARGG 553

Query: 295  RRENGK-------------------------------ASGRMAK----GGSGSGGSD--- 316
              + G+                               A G M +    GG  S   D   
Sbjct: 554  ANQRGRGGAQRGANQQRGGARGGGQQRGRGGPPRASHAPGHMGRTGRQGGFTSAAQDKNL 613

Query: 317  IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNE 376
               +V+ + +    P  +F FS++ CE++A ++S  DF T +EK  +  + + ++  L  
Sbjct: 614  WVHLVQFLKKENLLPACIFVFSKKRCEENADALSNQDFCTAQEKSHIHMIIERSIARLKP 673

Query: 377  EDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPA 436
            EDR LP I  +  LL RGIAVHH GLLP++KE+VE+LF E LVK LFATETFAMGLN+P 
Sbjct: 674  EDRVLPQIIRLRELLSRGIAVHHGGLLPIVKEMVEILFAETLVKVLFATETFAMGLNLPT 733

Query: 437  KTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV----DEQMEMNTLK 492
            +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G C+I+V    DE   +  L+
Sbjct: 734  RTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVG-CVIIVPPGGDEAPPVTDLR 792

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
             M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K V  
Sbjct: 793  QMMLGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKAVKL 850

Query: 553  LEEEAASLDASG----EAEVAEYHK----LKLDIAQLEKKLMS-----EITRPERVLYYL 599
             E + A +        +  + E H+     K+   +L + L++     ++  P R++ Y+
Sbjct: 851  SEADLAKVKRDSCPICDIHMDECHQAGEDFKVATEELYRALLAIPVGRKLFTPGRLIVYM 910

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPS-AGVGTLPSRGGGYIVPVQ-----------LP 647
              G    VR  G        + + + PS AG    P+    +++ ++           LP
Sbjct: 911  KEG----VRTPG--------ILLAEGPSKAGTAANPTL---HVLEIKTGRELRNDTDLLP 955

Query: 648  LISTLSKIRLSVPPDLRPLDARQS--ILLAVQELESRFPQGL-PKLNPVKDMKIEDPEVV 704
               TL+K    +P   + +  + +   L  V  L     + + P++    D+  +  E++
Sbjct: 956  FTPTLAKWYTPLPAHKKNIYIKTTHIPLSDVVCLTKHITRNIVPEIFNGGDVYTKAKEML 1015

Query: 705  DLVNQ------IEELE----HKLFAHPLNKSQDENQIRCFQRKA-EVNH----------- 742
              + +       +E++      L  H +   + E +++C +  A + +H           
Sbjct: 1016 HQICKSWTTPIWDEMDLSRIKSLSIHEIITRRREAEVKCTKSPAVDCDHFLKHYAMCHDQ 1075

Query: 743  -----EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
                 +I +L+  + +  +Q   D  + R +VLK L  ID    +QLKG+ AC I +GDE
Sbjct: 1076 WLIKTKIDELRQSLSNQNLQLLPD-YEQRIQVLKDLSFIDDASRIQLKGKVACEIHSGDE 1134

Query: 798  LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
            L++TEL+      D +  ++AAL S F+  +K+    NL   L +  + + E + K+  +
Sbjct: 1135 LVLTELILENVLADYEPAEIAALLSAFVFQEKTDMVPNLTSNLERGQKTIIELSEKVNAV 1194

Query: 858  QNECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            Q   ++ ++ DE  +   +P   LM+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE
Sbjct: 1195 QTLHQVILSSDEGSDFASKPRFGLMEVVYEWARGMSFKNITNLTDVLEGTIVRTISRLDE 1254

Query: 916  FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               +++ AA+ +G+  L +K A   E ++R I    SLY+
Sbjct: 1255 TCREVKNAARIIGDPELYQKMATTQELIKRDITAVASLYM 1294


>gi|315041214|ref|XP_003169984.1| hypothetical protein MGYG_08161 [Arthroderma gypseum CBS 118893]
 gi|311345946|gb|EFR05149.1| hypothetical protein MGYG_08161 [Arthroderma gypseum CBS 118893]
          Length = 1292

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 338/996 (33%), Positives = 523/996 (52%), Gaps = 127/996 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 316  DMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 375

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 376  IKALSNQKFRDFRGTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 435

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 436  FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTP 495

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL-KQKI------------GG 294
             RP PL+HY++   G  ++ +VD +++F E  +    D    + KI            GG
Sbjct: 496  KRPVPLEHYLW--AGKEIHKIVDAEKRFIEKGWKDTDDILSGRDKIKAQKAAEAQAARGG 553

Query: 295  R--------------------------RENGKASGR----MAKGGSGSGGSDIFK----- 319
            +                          R  G+ S R    +A+ G G G +   +     
Sbjct: 554  KQPERGRGQGQRGSGQRGTGQRGGAQQRGRGQPSARGIGNIARTGRGGGRTSAAQDRNVW 613

Query: 320  --IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
              +V+ +  R+  P  +F FS++ C ++A S+S  DF T  +K  +  V + ++  L  E
Sbjct: 614  VHLVQYLRNREMLPACIFVFSKKRCGENADSLSNQDFCTAADKSAIHMVVEKSLTRLRVE 673

Query: 378  DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
            DR+LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFATETFAMGLN+P +
Sbjct: 674  DRDLPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKILFATETFAMGLNLPTR 733

Query: 438  TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
            TVVF+  +K DG + R + +GEY QM+GRAGRRG D  G  II+    DE   +  L+ M
Sbjct: 734  TVVFSGYRKHDGRAFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSGRDEAPPIAALRKM 793

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
            +LG P  L S FRL+Y  +LNL+ R E     E +IK SF +   +  LP+  K+V   E
Sbjct: 794  ILGDPTKLRSQFRLTYNMMLNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQLSE 851

Query: 555  EEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
                 +     A  + ++A  H+  ++  +L  +L + +           + +LI  ++ 
Sbjct: 852  ASLQRIKREPCAICDVDLAACHQAGVEYERLTIQLHTLLMASPVGKRMYAAKQLIVFKKN 911

Query: 611  GTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ--------LPLISTLSKI--RLSVP 660
            G          V+ K     G +PS     I P++        LP +    +   RLS  
Sbjct: 912  GVR-----TAGVLMKEGVTGGPIPSLSVFEIGPLESRRFPSDILPYMPMFREYFHRLSTS 966

Query: 661  PDLRPLDA----------------------------RQSILLAVQELESRFPQGLPK--- 689
            P+   L +                            ++++ +A +E        + K   
Sbjct: 967  PENMALKSCKVPLANLECVTGTTVRIGAPTWCLNMHKEAVKVAEKEFSKLCASWIDKAWD 1026

Query: 690  ---LNPVKDMKIED-----PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVN 741
                  VKDM + +      + V +      L+   F        DE Q++         
Sbjct: 1027 ELDWERVKDMSVREVLEQRAQQVKIAQSCACLQCPQFLKHFEMQHDEWQVK--------- 1077

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
              I QLK  M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL++T
Sbjct: 1078 ENISQLKQLMSDQNLQLLPD-YEQRIQVLKDLGFVDEACRVQLKGKVACEIHSADELVLT 1136

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+      + +  ++ AL S F+  +K+  +  L   L    + +   + ++ ++Q + 
Sbjct: 1137 ELILENILAEYEPEEIVALLSAFVFQEKTENEPTLTPRLEAGKEAIIAISNRVNDLQIQH 1196

Query: 862  KLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            ++ ++ D+  +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE   +
Sbjct: 1197 QVVLSSDDANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDETCRE 1256

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ++ AA+ VG+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1257 VKNAAKLVGDPSLYNKMQLAQEMIKRDVIFAASLYL 1292


>gi|198433188|ref|XP_002130768.1| PREDICTED: similar to superkiller viralicidic activity 2-like [Ciona
            intestinalis]
          Length = 1235

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 350/991 (35%), Positives = 537/991 (54%), Gaps = 89/991 (8%)

Query: 35   TRSCVHEVAVPSGYALTKDE-AIHGTFANPVYNGE-----MAKTYSFELDPFQRVSVACL 88
            TRS    +A+P    L++++ A        V N       MA+T+ FELD FQ+ +V  L
Sbjct: 261  TRSPSENIAMPGDKPLSEEKWAYKVDIDTSVTNFHQQVPVMARTWPFELDTFQKQAVLKL 320

Query: 89   ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGL 148
            E  +SV V+AHTSAGKT VAEYAIA++ +   RVIYTSP+KALSNQK+R+  Q F DVGL
Sbjct: 321  EDRKSVFVAAHTSAGKTVVAEYAIALSAKHMTRVIYTSPIKALSNQKFRDFKQTFSDVGL 380

Query: 149  MTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESII 208
            +TGDV ++P+A CL+MTTEILR MLY GS+ ++++ WVIFDE+HY+ D ERGVVWEE +I
Sbjct: 381  ITGDVQINPDAFCLIMTTEILRSMLYNGSDTIRDLEWVIFDEVHYINDSERGVVWEEVLI 440

Query: 209  FLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSG---- 264
             LP    +V LSAT+ N  +FA WI    ++  +V+ T  RP PL HY++  G S     
Sbjct: 441  MLPVHCNVVLLSATVPNTMEFANWIGRTKQKKIYVISTQKRPVPLTHYLY-TGNSNKTND 499

Query: 265  -LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKM 323
             ++L+VD   +F    + K   T   ++   +++ G    R+    S  G      ++  
Sbjct: 500  QMFLIVDSNRKFDTAGYQKAL-TARTERSNKQQKTGAKVQRITNPASDKG--IWLSLLNR 556

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +    PV+ F+FSR+ C+++A  +S LD  + +EK  +       V  L   D+NLP 
Sbjct: 557  LCKLNQLPVVAFTFSRKRCDENAALLSSLDLTSTQEKSEIHIFVNKCVKKLKGSDQNLPQ 616

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            ++ M   L+ GI VHHSG+LP++KE+VE+LF  GLVK LFATETFAMG+NMPA+TVVF +
Sbjct: 617  VQQMSEQLQHGIGVHHSGILPILKEVVEMLFARGLVKLLFATETFAMGVNMPARTVVFDS 676

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPL 502
            ++K DG   R + +GEYIQM+GRAGRRG DD G  II+   Q+ EM  L+ M+LG+P  L
Sbjct: 677  LRKHDGTKMRNLLAGEYIQMAGRAGRRGLDDVGNVIILCKGQVPEMAELQIMMLGRPTKL 736

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE------EE 556
             S FRL+Y  ILNL+ R E Q   E V+K SF +F   K      ++V +L       EE
Sbjct: 737  ESQFRLTYGMILNLL-RVE-QLRVEEVMKRSFSEFGSRKNSKAREQRVRELNVQMKRGEE 794

Query: 557  AASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI----------- 605
               L  + + E  +Y     ++ +L K +  ++         +  GR++           
Sbjct: 795  MRELIETTDYE--DYLNTCQELLRLRKSVYKQVLSSPSSTKLIHPGRIVVLSCSPYQQHL 852

Query: 606  ----KVREGGTDWGWGVVVNVVKK-PSAGVGTLPSR---GGGYIVPVQLPL--------- 648
                KV     +  + V+V   K+ P   +     R   G    VPV  P          
Sbjct: 853  AVTLKVNTSRVEKYFTVMVLTEKEPPKTDINCWDPRYIMGQLLTVPVSTPCEKLLEITID 912

Query: 649  -ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ---GLPKLNPVKDMKIEDPEVV 704
             I  ++  +L +  D    D ++     +    S  P    G+     ++ ++ +D   V
Sbjct: 913  DILVITNKKLKIQSDRIFEDCKRR---EIPRFSSDLPDKATGIALQELLRILQSKDCGQV 969

Query: 705  DL-----VNQIEELEHKLFAHPLNKSQD--ENQIRC-----FQRKAEVNHEIQQLKSKMR 752
            DL     VN+I+ +E+ L    +N   D   +  +C     F  +        QLK ++ 
Sbjct: 970  DLRADLGVNEIDMVENIL---SMNSLIDLVTSAFQCVSSPLFNTQVHEVAAFVQLKKELN 1026

Query: 753  D------SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            D       +      E K R  VLK+L +ID  G VQLKGR AC I +  E+++TE++F 
Sbjct: 1027 DLKYLLSEKSLLLLPEFKQRKLVLKQLRYIDFGGAVQLKGRVACEI-SSHEIVLTEIIFE 1085

Query: 807  GTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
              F+ ++  ++ AL S  +    VD     + L   L + + ++ E A+ + E+Q    +
Sbjct: 1086 NVFSTMEPAEIVALLSSVVFQQRVDMGD--VTLTPNLKEGMNKIIEVAKSVGELQWAQGI 1143

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
            +  V+++V+ T+   L++V+Y W++G +F ++  +T + EG ++R+ +RL E    +R A
Sbjct: 1144 QQPVEDFVK-TLNFGLVEVVYEWAQGTSFKDITNLTLVQEGMVVRTIQRLYETCRDVRNA 1202

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            A+ +G+  L +K    SE ++R I+F+ SLY
Sbjct: 1203 ARVIGDPTLFEKMKTCSELIKRDIVFAASLY 1233


>gi|115395946|ref|XP_001213612.1| hypothetical protein ATEG_04434 [Aspergillus terreus NIH2624]
 gi|114193181|gb|EAU34881.1| hypothetical protein ATEG_04434 [Aspergillus terreus NIH2624]
          Length = 1298

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 356/1008 (35%), Positives = 532/1008 (52%), Gaps = 143/1008 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 314  DMAREWPFELDTFQKEAVYHLESGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 373

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 374  IKALSNQKFRDFRNTFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 433

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 434  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTA 493

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTF-------------- 287
             RP PL+HY++   G   + +VD  ++F E      DN +  +D                
Sbjct: 494  KRPVPLEHYLW--AGKDKFKIVDSNKRFLENGWKEADNVISGRDKIKAQKAAEAQAQSQA 551

Query: 288  --------LKQKIGGRRENGKASGR-MAKGGSGSGGSD---------------------- 316
                     + +  GR   G+A GR  A+G S  GG+                       
Sbjct: 552  QRGGPQGRGRGQAAGR---GQAPGRGGARGNSQRGGAPRGRGQPSNRGTGNIARTGRGGG 608

Query: 317  ----------IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQV 366
                        ++V+ + +    P  +F FS++ CE++A S+S  DF    EK  +   
Sbjct: 609  RTTAAQDKTIWVQLVQHLRKENLLPGCIFVFSKKRCEENADSLSNQDFCNASEKSLIHMF 668

Query: 367  FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
             + ++  L  EDR+LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATE
Sbjct: 669  IEKSLTRLKPEDRDLPQIRRLRDLLSRGIAVHHGGLLPIMKEIVEILFAKSLVKVLFATE 728

Query: 427  TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---D 483
            TFAMGLN+P +TVVF+  +K DG   R +  GEY QM+GRAGRRG D  G  II+    D
Sbjct: 729  TFAMGLNLPTRTVVFSGFRKHDGKGFRDLLPGEYTQMAGRAGRRGLDTVGYVIIVSVGKD 788

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            E      L+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  L
Sbjct: 789  EAPPAAALRRMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALL 846

Query: 544  PDIGKKVS-------KLEEEAA-----SLDASGEAEVAEYHKL--KLDIAQLEKKLMSEI 589
            P+  K+V        K++ EA       L A  +A + EY KL  +L +  +   +   +
Sbjct: 847  PEHEKQVQLSEASLEKIKREACDICDVDLTACHDAAI-EYEKLTSELHVGLVSSPIGKRL 905

Query: 590  TRPERVLYYLGSGRL---IKVREGGTDWGWGVVVNVVKKPSAGVGT-------------- 632
              P+R++ Y   G     I VREG    G G   N+       +G+              
Sbjct: 906  FSPKRLIVYRKDGYRTAGIIVREG---VGGGPTPNIQVLEIGKLGSRRHPSDILPFLPEF 962

Query: 633  ------LPSRGGGYIVPV-QLPLIS----TLSKIRLSVPPDLRPLDARQSILLAVQELES 681
                  LP+R     + V ++PL      T + ++LS P     +  +++I  A +EL  
Sbjct: 963  RKLMQPLPTRAADMTLKVCKIPLSDLECITNTLVKLSGPTWYLNI-KKEAIKFADKELSK 1021

Query: 682  RF-PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEV 740
                   P  + +   +I++ +V D+      LE +     + +S    Q   F +  E+
Sbjct: 1022 LCGSWATPVWDEMDWSRIKELQVRDI------LEKRRAQAKIAQSCRSVQCPDFLKHFEM 1075

Query: 741  NHE-------IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
             H+       I QLK  M D  +Q   D  + R +VL++LG ID    VQLKG+ AC I 
Sbjct: 1076 QHDEWQVKENISQLKQLMSDQNLQLLPD-YEQRIQVLRELGFIDEQSRVQLKGKVACEIH 1134

Query: 794  TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
            + DEL++TEL+      + +  ++ AL S F+  +K+     L   L K     +E+  +
Sbjct: 1135 SADELVLTELILENVLAEYEPEEIVALLSAFVFQEKTENVPTLTPRLEKG----KEAIVR 1190

Query: 854  IAEIQNECKLEVNVDEYVE------STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
            I++  N+ +++  V +  E      S  R  L +V+Y W+KG +F  +  +TD+ EG+I+
Sbjct: 1191 ISDKVNDFQVQYQVIQSSEDSNDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIV 1250

Query: 908  RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            R+  RLDE   +++ AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1251 RTITRLDETCREVKNAAKLVGDPTLYTKMQQAQELIKRDVIFAASLYM 1298


>gi|302652619|ref|XP_003018156.1| hypothetical protein TRV_07852 [Trichophyton verrucosum HKI 0517]
 gi|291181768|gb|EFE37511.1| hypothetical protein TRV_07852 [Trichophyton verrucosum HKI 0517]
          Length = 1295

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 335/993 (33%), Positives = 527/993 (53%), Gaps = 118/993 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 316  DMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 375

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 376  IKALSNQKFRDFRGTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 435

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 436  FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKRKDIYVISTP 495

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------------------- 287
             RP PL+HY++   G  +Y +VD +++F E  +    D                      
Sbjct: 496  KRPVPLEHYLW--AGKEIYKIVDSEKRFIEKGWKDADDILSGRDKAKAQKAAEAQAARGG 553

Query: 288  -----------------------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFK----- 319
                                     Q+ G  + + +  G +A+ G G G +   +     
Sbjct: 554  HQSDRGRGQGQRGSGQRGTGQRGGPQQRGRGQPSARGIGNIARTGRGGGRTSAAQDRNVW 613

Query: 320  --IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
              +V+ + +R+  P  +F FS++ C ++A S+S  DF T  +K  +  V + ++  L  E
Sbjct: 614  VHLVQYLRKREMLPACIFVFSKKRCGENADSLSNQDFCTAADKSAIHMVVEKSLTRLRIE 673

Query: 378  DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
            DR+LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFATETFAMGLN+P +
Sbjct: 674  DRDLPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKILFATETFAMGLNLPTR 733

Query: 438  TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
            TVVF+  +K DG   R + +GEY QM+GRAGRRG D  G  II+    DE   + TL+ M
Sbjct: 734  TVVFSGYRKHDGRGFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSGRDEAPPITTLRKM 793

Query: 495  VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV---- 550
            +LG P  L S FRL+Y  +LNL+ R E     E +IK SF +   +  LP+  K+V    
Sbjct: 794  ILGDPTKLRSQFRLTYNMMLNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQLSE 851

Query: 551  SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
            + LE+      A  + ++A  H+  ++  +L  +L + +           + +L+  ++ 
Sbjct: 852  ASLEKIKREPCAVCDVDLAACHQASVEYERLTVQLHTLLLASPVGKRMYAAKQLVVFKKN 911

Query: 611  GTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ--------LPLISTLSKIRLSVPPD 662
            G          V+ K     G +PS     I PV+        LP +    +    +P  
Sbjct: 912  GVR-----TAGVLMKEGVTGGPIPSLNVFEIGPVESRRFPSDILPYMPVFREYFHPLPTS 966

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELE-HKLFAHP 721
               +   +S  + +  LE     G    +P+ ++   +  +     ++ + E  KL A  
Sbjct: 967  PENM-VLKSCKVPIANLEC--VTGTTVRHPMYEIYKAELTLTQEALKVADKEFSKLCASW 1023

Query: 722  LNKSQDE-------------------NQIR------CFQ-----RKAEVNHEIQQLKSK- 750
             +KS DE                    Q++      C Q     +  E+ H+  Q+K   
Sbjct: 1024 TDKSWDELDWERVKDMSVREVLEQRAQQVKIAKSCACLQCPQFLKHFEMQHDEWQVKENI 1083

Query: 751  ------MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
                  M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL++TEL+
Sbjct: 1084 SQLKLLMSDQNLQLLPD-YEQRIQVLKDLGFVDEASRVQLKGKVACEIHSADELVLTELI 1142

Query: 805  FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
                  + +  ++ AL S F+  +K+  + NL   L    + +   + ++ ++Q + ++ 
Sbjct: 1143 LENVLAEYEPEEIVALLSAFVFQEKTENEPNLTPRLEAGKEAIIAISDRVNDLQIKHQVV 1202

Query: 865  VNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            ++ D+  +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE   +++ 
Sbjct: 1203 LSSDDANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDETCREVKN 1262

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+ VG+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1263 AAKLVGDPSLYNKMQLAQEMIKRDVIFAASLYL 1295


>gi|402220073|gb|EJU00146.1| antiviral helicase [Dacryopinax sp. DJM-731 SS1]
          Length = 1258

 Score =  524 bits (1349), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 345/998 (34%), Positives = 524/998 (52%), Gaps = 134/998 (13%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 285  DMARKYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSP 344

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+  Q F    VG++TGDV ++P  SCL+MTTEILR MLY+G++++++V +
Sbjct: 345  IKALSNQKFRDFKQTFDPSTVGILTGDVQINPEGSCLIMTTEILRSMLYKGADLIRDVEF 404

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 405  VIFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 464

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
            T  RP PL+HY++   G  ++ +VD K +F    + +  +   +              Q+
Sbjct: 465  TPKRPVPLEHYLW--AGREMHKIVDAKGEFLAQGYKEAGEALRRKQDKEREAAGLPPVQR 522

Query: 292  IGGRRENGKASGRM----------AKGGSGSGGSDIFKIVKMIMERKFQ----------- 330
            +G R    + +             A+GG+  G +   +    +  R FQ           
Sbjct: 523  VGARGGAQRGANARGGQQGRGGPQARGGA-RGAAPPARGRGAMPPRSFQQQDRNLYVHLV 581

Query: 331  ---------PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
                     PV+VF+FS+R CE++A ++S  D  +  EK  V    + A+  L   D+ L
Sbjct: 582  GHLRKINLLPVVVFTFSKRRCEENAQTLSNTDLCSAVEKSEVHVTIEKALTRLKGSDKKL 641

Query: 382  PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
            P I  M  LL RGI VHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPA++VVF
Sbjct: 642  PQIARMRDLLSRGIGVHHGGLLPIVKEVVEILFSRGLVKVLFATETFAMGVNMPARSVVF 701

Query: 442  TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPA 500
            + +KK DG + R +  GEY QMSGRAGRRG D  G+ II+  DE  ++ TL  M+LG+P 
Sbjct: 702  SGIKKHDGRNFRELLPGEYTQMSGRAGRRGLDPTGVVIIVSGDELPDVGTLHIMMLGQPN 761

Query: 501  PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS- 559
             L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LPD  +KV ++E+E  + 
Sbjct: 762  KLQSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQRLLPDQQRKVLEVEKELKAM 819

Query: 560  --LDAS-GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGW 616
              LD      ++  ++ +  D+A L  +L+   T        L  GR++ +R G      
Sbjct: 820  PELDCPVCRPDIETFYDISADLAYLNSRLIELATTHPAGSKVLRPGRVVVLRNGHFGQNL 879

Query: 617  GVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAV 676
             +++  V    +   T P       + +  P   T S+ R   PP              V
Sbjct: 880  AILLKAVPLQVSSPATSPLARQYLFLALADPDTKTGSRDR---PPS------------KV 924

Query: 677  QELESRFPQGLPKLNPVKDM---KIEDPEVVD---LVNQIEELEHKLFAHPLNKS----- 725
              L    P  LP  +PV D+    + D + V    +V + +E+  K    P+  +     
Sbjct: 925  PPLWPPEPAKLPSCDPVYDLVLAPLGDVQFVTNRIVVEEFDEIADKHRILPMKHAAEALQ 984

Query: 726  ------QD------------------------ENQIRCFQRKA-----------EVNHEI 744
                  QD                        +N  R    KA           +  H I
Sbjct: 985  AIALEWQDLDMLPEVEWAKFHTLDFQDTLRNRDNLHRLLSGKACVLCEGFLGHYDALHGI 1044

Query: 745  QQLKSK-------MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
            + L+++       + D  ++   D  + R +VLK L  ID    V LKGR AC I++  E
Sbjct: 1045 KMLRAQIASLKLAISDQNLELLPD-YEQRVQVLKDLKLIDERSTVLLKGRVACEINSASE 1103

Query: 798  LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
            L++TEL+   T    +  +V AL S F+  +K+  +  +  +L +   ++   A ++ ++
Sbjct: 1104 LILTELILENTLARYEPEEVVALLSAFLFQEKTETEPVIPPKLEEGKAEVIRLAERVQKV 1163

Query: 858  QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
            +   K+     E  E  ++  LM+V+Y W++G  F ++ ++TD+ EG+I+R   RLDE  
Sbjct: 1164 ELANKVAT---EDFEGKLKFGLMEVVYEWARGMPFEKITELTDVPEGTIVRVITRLDETC 1220

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             ++R AA+ +G+ +L KK   A   ++R I+F+ SLY 
Sbjct: 1221 REVRDAARVIGDADLFKKMEEAQIKIKRDIVFAASLYF 1258


>gi|410075151|ref|XP_003955158.1| hypothetical protein KAFR_0A05880 [Kazachstania africana CBS 2517]
 gi|372461740|emb|CCF56023.1| hypothetical protein KAFR_0A05880 [Kazachstania africana CBS 2517]
          Length = 1276

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 332/980 (33%), Positives = 530/980 (54%), Gaps = 107/980 (10%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 310  ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAKRNMTKTIYTSPIK 369

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F+DV  GL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 370  ALSNQKFRDFKETFQDVDIGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 429

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 430  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTA 489

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------------------- 287
             RP PL+  ++    + L  V++   +F + NF K +D                      
Sbjct: 490  KRPVPLEINIW--AKNQLIPVINPHREFLDANFKKHKDLLSGKPELPGQQNSNTGKNQRG 547

Query: 288  --------------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFK-----------IVK 322
                             +  G +  G   G    G  GS  S  F+           +V 
Sbjct: 548  GQRGGQTGGQRGGQRGGQRAGSQRGGLQRGARGAGAVGSNKSQFFRRAGPNKKTWPDLVN 607

Query: 323  MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
             +  +   P++VF FS++ CE++A  +  ++F   +E+  +    +N++  L +EDR LP
Sbjct: 608  YLRSKDLLPMVVFVFSKKRCEEYADWLEGINFCNNKERSQIHMFIENSITRLKKEDRELP 667

Query: 383  AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
             +  +  LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TVVF+
Sbjct: 668  QVLKVKSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVVFS 727

Query: 443  AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAP 501
             ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +E + + + K++ LG P  
Sbjct: 728  EIRKHDGNGVRDLTPGEFTQMAGRAGRRGLDKTGTVIVMAYNEPLPLLSFKEVTLGVPTK 787

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S FRL+Y  ILNL+ R E     E +IK SF +   + + P+  KK+  LE +  S+ 
Sbjct: 788  LESQFRLTYNMILNLL-RIEA-LKVEEMIKYSFSENTNQTSHPEHQKKIKDLEGQLESVK 845

Query: 562  ASGEAEVAEYHKLKLD----IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWG 617
                 + AE     LD      ++   +M+E+T+ + +   + +G L+  R+   +   G
Sbjct: 846  DYDCEDCAEDLDKLLDQIMKYREVTADMMTELTKTDAIFRVIRAGTLVVFRDKEENHRLG 905

Query: 618  VVVNVVKKPSAGVGTLPSRGGGYIV--PVQLPLISTLSKI--RL------------SVPP 661
             V     K    V  + +R        P+ +P +   +    R+             VP 
Sbjct: 906  FVYRNSVKNGIAVIMVITRPNTTSTDEPIYIPYLGNKTAFVKRIFNKFETEPFYMEEVPF 965

Query: 662  DLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP 721
                L  +  + ++  E+ ++ P+ L KL    D+      ++   N+++E ++K   + 
Sbjct: 966  TSIELITKYLLNVSFTEIMNKEPEALEKLQEEIDI------LIKFSNRLKETKYKARGN- 1018

Query: 722  LNKSQD----EN---------QIRCFQ---------RKAEVNHEIQQLKSKMRDSQIQKF 759
            L   QD    EN           +C +         +K ++  +I+QL   M D  +   
Sbjct: 1019 LKVHQDILERENISEELLKIKATKCSKLALHLIPKYKKLDIQKKIKQLHHLMSDENLNLL 1078

Query: 760  RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
             D   +R  VL+  G ID    VQLKGR AC I++G EL++TEL+ +    D +  ++ A
Sbjct: 1079 PD-YGHRLDVLQTAGFIDETHNVQLKGRVACEINSGYELVITELILDNFLGDFEPEEIVA 1137

Query: 820  LASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEIQNECKLEVNVD--EYVESTV 875
            L S F+   ++ E+        L K  ++++E  +K+  +   C++ +  +  E++E   
Sbjct: 1138 LLSAFVYEGRTREEEPPIATPRLVKGKKRIEEIYQKMLTLYEICQVPLTQEEAEFLERK- 1196

Query: 876  RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
            R  LM+V+Y W++G +F E++ ++   EG+++R    LDE   Q++AAA  +G   L  K
Sbjct: 1197 RFALMNVVYEWARGLSFKEIMNISPEAEGTVVRVITWLDEICRQVKAAAIIIGNTALHMK 1256

Query: 936  FAAASESLRRGIMFSNSLYL 955
             + A E ++R I+F+ SLYL
Sbjct: 1257 MSRAQELIKRDIVFAASLYL 1276


>gi|134115014|ref|XP_773805.1| hypothetical protein CNBH2570 [Cryptococcus neoformans var.
            neoformans B-3501A]
 gi|50256433|gb|EAL19158.1| hypothetical protein CNBH2570 [Cryptococcus neoformans var.
            neoformans B-3501A]
          Length = 1275

 Score =  523 bits (1348), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 343/996 (34%), Positives = 524/996 (52%), Gaps = 120/996 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMAK Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 292  EMAKDYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKTIYTSP 351

Query: 128  LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+    F+   VG++TGDV ++   SCL+MTTEILR MLY+G++++++V +
Sbjct: 352  IKALSNQKFRDFKTTFEPSTVGILTGDVQINAEGSCLIMTTEILRSMLYKGADLIRDVEF 411

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            V+FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 412  VVFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 471

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
            T  RP PL+H+++   G   + +V  + +F  + +    D   +              Q+
Sbjct: 472  TPMRPVPLEHFLW--AGRETHKIVSSQSKFLMEGYSSASDALRRKQDKEREANGLPPVQR 529

Query: 292  IGGRR---------ENGKAS--GRMAKG------GSGSG--------------------- 313
             GGR            GK++   R+  G      G G+G                     
Sbjct: 530  TGGRGGAAIRAKDLPTGKSAPFTRIGAGRNHTNRGGGNGPPQAAFGGGRGGRGGGRGGFG 589

Query: 314  ---------GSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                       +I+  ++  + +    PV+ F FS++ CE++A ++S LD  T +EK  V
Sbjct: 590  GSSRPSHVLDQNIWTHLISYLKKNMLLPVVNFVFSKKRCEEYAQTLS-LDLCTAKEKSEV 648

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               ++ A+  L  ED+ LP I  M  LL RGI VHH GLLP++KE+VE+LF  GLVK LF
Sbjct: 649  HITWERALTRLKGEDKTLPQILRMRELLSRGIGVHHGGLLPLVKEVVEILFARGLVKVLF 708

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
            ATETFAMG+NMPAK+VVF+ ++K DG S R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 709  ATETFAMGVNMPAKSVVFSGIRKHDGTSFRNLLPGEYTQMAGRAGRRGLDTTGTVIILSG 768

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            DE   +  L +M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K 
Sbjct: 769  DELPSVEELNEMMLGVPNRLSSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENATQKM 826

Query: 543  LPDIGKKVSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
             P+  + +++ E+E A L         A++  ++ L  + ++L  + +   +   +    
Sbjct: 827  APEQQRVIAQTEKELAKLPKLECDVCSADIDAFYNLSTEASRLNAQFLKRASWSNQSGKL 886

Query: 599  LGSGRLIKVREG----------------GTDW------GWGVVVNVVKKPSAGVGTLPSR 636
               GR+I +R                  G D        + V+V V     +G G L   
Sbjct: 887  FVPGRVIVLRNAHFPGNLAVILGNHPNLGPDGQRSDVKAFRVLVLVTPGQKSGKGDLSVE 946

Query: 637  -----------GGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQS---ILLAVQELESR 682
                        G +  P     +   S I      D   L++R+S   +  A+ +L   
Sbjct: 947  ELTPRWPPILPKGSFPSPTAERTVVDTSSISFY---DFHRLNSRESPSDVQRALDDLTKL 1003

Query: 683  FPQ--GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAE 739
              +   LP+L      ++ D ++  L+ +      +L        +D  +       + +
Sbjct: 1004 HEELSLLPELPEADWSRLRDIDIQSLLKERTNAAGRLSKLGCQLCEDFADHYATVHERKQ 1063

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            V   IQ+LK ++ D  ++   D  ++R  VLK+L  ID +  V LKGR AC I++  EL+
Sbjct: 1064 VEQRIQKLKLQLSDQNLELLPD-YESRVEVLKRLSFIDENATVLLKGRVACEINSAPELI 1122

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+      D    +V AL S F+ V+K+  Q  +  +L   L  +   A ++   Q+
Sbjct: 1123 LTELILENILADYTPEEVVALLSIFVFVEKTESQPIIPTKLQDGLDVIYNIAEQVEREQD 1182

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
             C  +V  DE+  +  +P L++V+Y W++G  F E+  +TD+ EG+I+R   RLDE   +
Sbjct: 1183 YC--QVQHDEFA-TKYKPGLVEVVYEWARGMPFNEITNLTDVPEGTIVRVITRLDETCRE 1239

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +R AA+ +G+ +L KK   A   +RR I+F+ SLYL
Sbjct: 1240 VRDAARVIGDADLFKKMEEAQGLIRRDIVFAASLYL 1275


>gi|119480913|ref|XP_001260485.1| DEAD/DEAH box RNA helicase (Ski2), putative [Neosartorya fischeri
            NRRL 181]
 gi|119408639|gb|EAW18588.1| DEAD/DEAH box RNA helicase (Ski2), putative [Neosartorya fischeri
            NRRL 181]
          Length = 1293

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 363/1014 (35%), Positives = 526/1014 (51%), Gaps = 161/1014 (15%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 315  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALASKHMTKAIYTSP 374

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+   EF DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 375  IKALSNQKFRDFRTEFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 434

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 435  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTA 494

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKI--------- 292
             RP PL+HY++   G   Y +VD  ++F E      DN +  +D    QK          
Sbjct: 495  KRPVPLEHYLW--AGKDKYKIVDSNKRFLETGWKEADNIISGRDKLKAQKAAEAQAQSQA 552

Query: 293  --------------------GGRRENGKASGRMAKGGSGSGG-----------------S 315
                                G  +  G   GR      G+G                  +
Sbjct: 553  QRGGQQGRGRGQPAGRGAPRGNAQRGGAPRGRGQPANRGTGNIARTGRGGGRTTAAQDKT 612

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
               ++V  + +    P  +F FS++ CE++A S+S  DF    EK  +    + ++  L 
Sbjct: 613  IWVQLVGHLRKENLLPGCIFVFSKKRCEENADSLSNQDFCNASEKSLIHMFIEKSLTRLK 672

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
             EDR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P
Sbjct: 673  PEDRTLPQILRLRELLSRGIAVHHGGLLPIMKEIVEILFAKSLVKILFATETFAMGLNLP 732

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLK 492
             +TVVF+  +K DG   R +  GEY QM+GRAGRRG D  G  II+    DE      L+
Sbjct: 733  TRTVVFSGFRKHDGRGFRDLLPGEYTQMAGRAGRRGLDTVGYVIIVSAGRDEAPPAGALR 792

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV-- 550
             M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K+V  
Sbjct: 793  KMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQL 850

Query: 551  -----SKLEEEAA-----SLDASGEAEVAEYHKL--KLDIAQLEKKLMSEITRPERVLYY 598
                 +K++ E        L A  +A + EY KL  +L +  L   +   +  P+R++ Y
Sbjct: 851  SEASLAKIKREPCDICDIDLVACHDAAI-EYEKLTSELHVGLLASPVGKRLFMPKRLVVY 909

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIR-- 656
               G     R  G          ++ +   G G  PS        +Q+  I  LS  R  
Sbjct: 910  RKDG----FRTAG----------IIVREGVGGGATPS--------IQVLEIGKLSHRRHP 947

Query: 657  ---LSVPPDLR----PLDARQSIL------LAVQELE----SRFPQGLPK--LNPVKD-M 696
               L   P  R    PL  R + +      + + +LE    +    G P   LN  K+ +
Sbjct: 948  SDILPFLPRFRHLLHPLPTRAADMTLKVCKIPLSDLECVTNTMVKVGGPTWYLNIKKEAI 1007

Query: 697  KIEDPEVVDLV-------------NQIEELEHKLFAHPLNKSQDENQI----RCFQ---- 735
            K  D ++ +L               +I+EL+ +     L K Q +  I    RC Q    
Sbjct: 1008 KFADKQLSELCASWTSPVWDEMDWARIKELQVRDI---LEKRQAQAAITQSCRCLQCPSF 1064

Query: 736  -RKAEVNHE-------IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
             +  E+ H+       I QLK  M D  +Q   D  + R +VL+ LG ID    VQLKG+
Sbjct: 1065 LKHFEMQHDEWQVKENISQLKQLMSDQNLQLLPD-YEQRIQVLRDLGFIDEQSRVQLKGK 1123

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             AC I + DEL++TEL+      + +  ++ AL S F+  +K+     L   L K     
Sbjct: 1124 VACEIHSADELVLTELILENVLAEYEPEEIVALLSAFVFQEKTENVPTLTPRLEKG---- 1179

Query: 848  QESARKIAEIQNECKLEVNVDEYVE------STVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            +E+  +IAE  N+ +++  V +  E      S  R  L +V+Y W+KG +F  +  +TD+
Sbjct: 1180 KEAIIRIAEKVNDLQIQYQVIQSSEDSNDFASQPRFGLAEVVYEWAKGMSFNRITDLTDV 1239

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             EG+I+R+  RLDE   ++R AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1240 MEGTIVRTITRLDETCREVRNAAKLVGDPTLYAKMQQAQELIKRDVIFAASLYM 1293


>gi|353236742|emb|CCA68730.1| probable SKI2-antiviral protein and putative helicase [Piriformospora
            indica DSM 11827]
          Length = 1236

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 346/989 (34%), Positives = 516/989 (52%), Gaps = 138/989 (13%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA  Y FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAE             IYTSP
Sbjct: 263  EMAHNYPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAE------------AIYTSP 310

Query: 128  LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+    F    VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +
Sbjct: 311  IKALSNQKFRDFKTTFSASSVGILTGDVQINPEANCLIMTTEILRSMLYKGADLIRDVEF 370

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 371  VIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 430

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG-----K 300
            T  RP PL+H+++   G   + +VD K  F    + +  +   +++   R   G     +
Sbjct: 431  TPKRPVPLEHFLY--AGKETFKIVDAKGSFLSSGYKEAGEALRRKQDKEREAAGLPPVQR 488

Query: 301  ASGRMA-----------------------KGGSGSGGSDIFK---------IVKMIMERK 328
               R A                       K G   GG+  F          ++  + +++
Sbjct: 489  LGARAAAPQRGQRGGGPGRGAATRGGGVVKTGP-MGGARTFHSADKNLYVHLLNHLRKKE 547

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
              PV+VF+FS++ CE++A +++  D  T  EK  V    + A+  L   D+ LP I  M 
Sbjct: 548  LLPVVVFTFSKKRCEENAATLTNADLCTSVEKSEVHVAVEKALSRLKGTDKQLPQIGRMR 607

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL RGI VHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPA+ VVF+ ++K D
Sbjct: 608  DLLSRGIGVHHGGLLPIVKEVVEILFARGLVKILFATETFAMGVNMPARCVVFSGIRKHD 667

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFR 507
            G S R + +GEY QMSGRAGRRG D  G+ +I+  DE  EM TL  M+LG P+ L S FR
Sbjct: 668  GKSFRELLAGEYTQMSGRAGRRGLDSTGVVVIVAGDELPEMATLNKMMLGTPSRLQSQFR 727

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL-DASGEA 566
            L+Y  ILNL+ R E     E +IK SF +   ++ LPD  KK+ ++E +   L D   + 
Sbjct: 728  LTYNMILNLL-RVEA-LKVEEMIKRSFSENASQRLLPDQQKKIIEIEAKLKKLPDLQCDV 785

Query: 567  ---EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV 623
               ++   + L  +I    + L+S              GR++ +R+G   +   + V + 
Sbjct: 786  CTPDIQVVYDLSKEIIWRHQDLLSTAASQPAGTKLFAPGRIVILRDG--HFSGNIAVLLK 843

Query: 624  KKPSAGVG---------------------------------------TLPSRGGGYIVPV 644
            K P A V                                        TL      Y V +
Sbjct: 844  KAPLASVAQDGGQKLAPYFVLALIDPETKQKAHEKQSIPPIWDIKPETLMQEERAYDVCI 903

Query: 645  QLPLISTLSKIRLSVPPDLRPLDARQSILL------AVQELESRFPQGLPKLNP-VKDMK 697
             +P+ S L      + PD+  +  RQ I +       +QE+ + +    P   P V+  K
Sbjct: 904  -VPISSILRVTNRVIKPDIDMILERQRISVMREIVEQLQEIATEWHNASPPRIPEVEWSK 962

Query: 698  IEDPEVVDLVNQIEELEHKL---------------------FAHPLNKSQDENQIRCFQR 736
            +   E  + +   E LE +L                     F    +K +   QI     
Sbjct: 963  MRQLEFQENLRSREALEKRLEGKGCTLCEHFNEHRASPWARFPAVADKGKQYGQI---HE 1019

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            + ++  EI+ LK  + D  ++   D  + R  VLK L  ID +  VQLKGR AC I++ D
Sbjct: 1020 RKQLLAEIESLKFALSDQNLELLPD-YEQRIAVLKDLKFIDDNSTVQLKGRVACEINSAD 1078

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            EL++TEL+   TF D +  +VAAL SCF+  +KS  +  L   LAK  +++   A ++  
Sbjct: 1079 ELILTELILENTFADYELEEVAALLSCFVFQEKSEVEPVLTPTLAKGREEILVVADRVGR 1138

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            IQ+  K+     E  E  ++  L++V+Y W+KG TF ++ ++TD+ EG+I+R   RLDE 
Sbjct: 1139 IQDYHKVSA---EDFEKKLKFGLVEVVYEWAKGTTFEDITKLTDVAEGTIVRVITRLDET 1195

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRR 945
              ++R AA+ +G+  L KK   A   ++R
Sbjct: 1196 FREVRDAARVIGDAELFKKMEEAQTKIKR 1224


>gi|146322888|ref|XP_755333.2| DEAD/DEAH box RNA helicase (Ski2) [Aspergillus fumigatus Af293]
 gi|129558510|gb|EAL93295.2| DEAD/DEAH box RNA helicase (Ski2), putative [Aspergillus fumigatus
            Af293]
          Length = 1293

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 356/999 (35%), Positives = 524/999 (52%), Gaps = 131/999 (13%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 315  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALASKHMTKAIYTSP 374

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+   EF DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 375  IKALSNQKFRDFRTEFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 434

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 435  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTA 494

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQD---------------- 285
             RP PL+HY++   G   Y +VD  ++F E      DN +  +D                
Sbjct: 495  KRPVPLEHYLW--AGKDKYKIVDSNKRFLETGWKEADNVISGRDKIKAQKAAEAQAQSQA 552

Query: 286  -------------TFLKQKIGGRRENGKASGRMAKGGSGSGG-----------------S 315
                         T      G  +  G   GR      G+G                  +
Sbjct: 553  QRGGQQGRGRGQPTGRGAPRGNAQRGGAPRGRGQPANRGTGNIARTGRGGGRTTAAQDKT 612

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
               ++V  + +    P  +F FS++ CE++A S+S  DF    EK  +    + ++  L 
Sbjct: 613  IWVQLVGHLRKENLLPGCIFVFSKKRCEENADSLSNQDFCNASEKSLIHMFIEKSLTRLK 672

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
             EDR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P
Sbjct: 673  PEDRILPQILRLRELLSRGIAVHHGGLLPIMKEIVEILFAKSLVKILFATETFAMGLNLP 732

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLK 492
             +TVVF+  +K DG   R +  GEY QM+GRAGRRG D  G  II+    DE      L+
Sbjct: 733  TRTVVFSGFRKHDGRGFRDLLPGEYTQMAGRAGRRGLDTVGYVIIVSAGRDEAPPAGALR 792

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV-- 550
             M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K+V  
Sbjct: 793  KMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQL 850

Query: 551  -----SKLEEEAA-----SLDASGEAEVAEYHKL--KLDIAQLEKKLMSEITRPERVLYY 598
                 +K++ E        L A  +A + EY KL  +L +  L   +   +  P+R++ Y
Sbjct: 851  SEASLAKIKREPCDICDIDLVACHDAAI-EYEKLTSELHVGLLASPVGKRLFMPKRLVVY 909

Query: 599  LGSG---RLIKVREGGTDWGWGVVVNVV----------KKPS----------AGVGTLPS 635
               G     I VREG    G G   N+           + PS            +  LP+
Sbjct: 910  RKDGFRTAGIIVREG---VGGGATPNIQVLEIGKLSHRRHPSDILPFLPRFRHLLHPLPT 966

Query: 636  RGGGYIVPV-QLPL----ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL-PK 689
            R     + V ++PL      T + +++  P     +  +++I  A +EL         P 
Sbjct: 967  RAADMTLKVCKIPLSDLECVTNTIVKVGGPTWYLNI-KKEAIKFADKELSKLCASWTSPI 1025

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE------ 743
             + +   +I++ +V D+      LE +     + +S    Q   F +  E+ H+      
Sbjct: 1026 WDEMDWARIKELQVRDI------LEKRQAQAAITQSCRCLQCPSFMKHFEMQHDEWQVKE 1079

Query: 744  -IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
             I QLK  M D  +Q   D  + R +VL+ LG ID    VQLKG+ AC I + DEL++TE
Sbjct: 1080 NISQLKQLMSDQNLQLLPD-YEQRIQVLRDLGFIDEQSRVQLKGKVACEIHSADELVLTE 1138

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+      + +  ++ AL S F+  +K+     L   L K     +E+  +IAE  N+ +
Sbjct: 1139 LILENVLAEYEPEEIVALLSAFVFQEKTENVPTLTPRLEKG----KEAIIRIAEKVNDLQ 1194

Query: 863  LEVNVDEYVE------STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            ++  V +  E      S  R  L +V+Y W+KG +F  +  +TD+ EG+I+R+  RLDE 
Sbjct: 1195 IQYQVIQSSEDSNDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDET 1254

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              ++R AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1255 CREVRNAAKLVGDPTLYAKMQHAQELIKRDVIFAASLYM 1293


>gi|390604989|gb|EIN14380.1| antiviral helicase [Punctularia strigosozonata HHB-11173 SS5]
          Length = 1256

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 336/993 (33%), Positives = 527/993 (53%), Gaps = 113/993 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD--------- 118
            EMA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +          
Sbjct: 272  EMAHQYPFELDTFQKQAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAQKHMTRHFQPLD 331

Query: 119  ---------KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTE 167
                     + R IYTSP+KALSNQK+R+  Q F  + VG++TGDV ++P  +CLVMTTE
Sbjct: 332  LLQSAILIVQYRAIYTSPIKALSNQKFRDFKQTFSSQSVGILTGDVQINPEGNCLVMTTE 391

Query: 168  ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
            ILR MLY+G++++++V +VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  
Sbjct: 392  ILRSMLYKGADLIRDVEFVIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTK 451

Query: 228  QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
            +FA+W+    ++  +V+ T  RP PL+HY++   G  ++ V+D K  F    +    +  
Sbjct: 452  EFADWVGRTKRKDIYVISTAQRPVPLEHYLY--SGREMHKVLDAKRNFLAQGYKDAAEAL 509

Query: 288  LK--------------QKIGGR--------------RENGKASGRMAKGGSGSGGSDIFK 319
             +              Q+ GGR              +    A GR      G   S  F 
Sbjct: 510  RRKQDKEREAAGLGPVQRTGGRGAPSRGGQRGGANAQRGAPARGRGTAPSRGGPPSRTFH 569

Query: 320  ---------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
                     ++  + ++   PV+VF+FS++ CE++A +++  D  T  EK  V    + A
Sbjct: 570  QADKSLYVHLLGHLKKKGLLPVVVFTFSKKRCEENAATLTNADLCTAVEKSEVHIAIEKA 629

Query: 371  VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
            +  L   DR LP I  M  LL RGI VHH GLLP++KE+VELLF  GLVK LFATETFAM
Sbjct: 630  LSRLKGSDRKLPQIARMRDLLSRGIGVHHGGLLPIVKEVVELLFARGLVKILFATETFAM 689

Query: 431  GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMN 489
            G+NMPA+ VVF+ ++K DG S R I  GEY QM+GRAGRRG D  G  I+  ++ + E  
Sbjct: 690  GVNMPARCVVFSGIRKHDGRSFREILPGEYTQMAGRAGRRGLDATGTVIVNANDDLPEQG 749

Query: 490  TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
             L  M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LPD  +K
Sbjct: 750  ILHHMMLGQPSKLQSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENASQRLLPDQQRK 807

Query: 550  VSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
            V + E   A+L         A++  Y+    +I  L ++L+S  +   + +  L +GR++
Sbjct: 808  VIEGERYLATLPKLECDICSADIELYYDSSREIVYLNQQLLSLASHHPQGIRTLAAGRVV 867

Query: 606  KVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLP--------LISTLSKIRL 657
             +R+G      GV++      +  +GT+      +++ +  P        + S +   R 
Sbjct: 868  VLRDGHFRCNVGVLLKPAPPQATELGTINQTKMYFVLALVNPETKRRENDIDSQMVAPRW 927

Query: 658  SVPPD------------LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVD 705
               P+            + P+ +   +   + ++++     + K+ P++D  +    VV+
Sbjct: 928  DFQPESLLVQDGQYELSVIPVTSIAMVTDRILKVDADAIATIHKIAPMRDAAVSLASVVE 987

Query: 706  ------LVNQIEELEHK-LFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
                   + + E ++ + L    L +S+D    R   R   +  + ++  S M   +I +
Sbjct: 988  EWITGGCIPEAEWVKMRSLEFQELLRSRDVIAQRLSGRACTLCADFEKHYSIMHSEKILR 1047

Query: 759  FR-DELK---------------NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
                ELK                R  VL++L  ID    V LKGR AC I++ +EL++TE
Sbjct: 1048 ASIAELKLAISDQNLELIPDYEQRIAVLQELKFIDEQSTVLLKGRVACEINSANELVLTE 1107

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+        +  ++AAL SCF+  +K+  + ++  +L +    +     ++  +Q+  K
Sbjct: 1108 LILENALASYEPEEIAALLSCFVFQEKTDNEPSVSPKLEEGRDTILAIEARVGRVQDAHK 1167

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
              V  +E+    ++  LM+V+Y W+KG  F ++  +TD+ EG+I+R   RLDE   ++R 
Sbjct: 1168 --VAAEEF--RALKFGLMEVVYEWAKGMPFEQITALTDVAEGTIVRCITRLDETCREVRD 1223

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+ +G+ +L KK   A   ++R I+F+ SLY 
Sbjct: 1224 AARIIGDADLMKKMEDAQTKIKRDIVFAASLYF 1256


>gi|159129410|gb|EDP54524.1| DEAD/DEAH box RNA helicase (Ski2), putative [Aspergillus fumigatus
            A1163]
          Length = 1293

 Score =  522 bits (1344), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 356/999 (35%), Positives = 524/999 (52%), Gaps = 131/999 (13%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 315  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALASKHMTKAIYTSP 374

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+   EF DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 375  IKALSNQKFRDFRTEFDDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 434

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 435  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTA 494

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQD---------------- 285
             RP PL+HY++   G   Y +VD  ++F E      DN +  +D                
Sbjct: 495  KRPVPLEHYLW--AGKDKYKIVDSNKRFLETGWKEADNVISGRDKIKAQKAAEAQAQSQA 552

Query: 286  -------------TFLKQKIGGRRENGKASGRMAKGGSGSGG-----------------S 315
                         T      G  +  G   GR      G+G                  +
Sbjct: 553  QRGGQQGRGRGQPTGRGAPRGNAQRGGAPRGRGQPANRGTGNIARTGRGGGRTTAAQDKT 612

Query: 316  DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
               ++V  + +    P  +F FS++ CE++A S+S  DF    EK  +    + ++  L 
Sbjct: 613  IWVQLVGHLRKENLLPGCIFVFSKKRCEENADSLSNQDFCNASEKSLIHMFIEKSLTRLK 672

Query: 376  EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
             EDR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P
Sbjct: 673  PEDRILPQILRLRELLSRGIAVHHGGLLPIMKEIVEILFAKSLVKILFATETFAMGLNLP 732

Query: 436  AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLK 492
             +TVVF+  +K DG   R +  GEY QM+GRAGRRG D  G  II+    DE      L+
Sbjct: 733  TRTVVFSGFRKHDGRGFRDLLPGEYTQMAGRAGRRGLDTVGYVIIVSAGRDEAPPAGALR 792

Query: 493  DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV-- 550
             M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K+V  
Sbjct: 793  KMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQVQL 850

Query: 551  -----SKLEEEAA-----SLDASGEAEVAEYHKL--KLDIAQLEKKLMSEITRPERVLYY 598
                 +K++ E        L A  +A + EY KL  +L +  L   +   +  P+R++ Y
Sbjct: 851  SEASLAKIKREPCDICDIDLVACHDAAI-EYEKLTSELHVGLLASPVGKRLFMPKRLVVY 909

Query: 599  LGSG---RLIKVREGGTDWGWGVVVNVV----------KKPS----------AGVGTLPS 635
               G     I VREG    G G   N+           + PS            +  LP+
Sbjct: 910  RKDGFRTAGIIVREG---VGGGATPNIQVLEIGKLSHRRHPSDILPFLPRFRHLLHPLPT 966

Query: 636  RGGGYIVPV-QLPL----ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL-PK 689
            R     + V ++PL      T + +++  P     +  +++I  A +EL         P 
Sbjct: 967  RAADMTLKVCKIPLSDLECVTNTIVKVGGPTWYLNI-KKEAIKFADKELSKLCASWTSPI 1025

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE------ 743
             + +   +I++ +V D+      LE +     + +S    Q   F +  E+ H+      
Sbjct: 1026 WDEMDWARIKELQVRDI------LEKRQAQAAITQSCRCLQCPSFMKHFEMQHDEWQVKE 1079

Query: 744  -IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
             I QLK  M D  +Q   D  + R +VL+ LG ID    VQLKG+ AC I + DEL++TE
Sbjct: 1080 NISQLKQLMSDQNLQLLPD-YEQRIQVLRDLGFIDEQSRVQLKGKVACEIHSADELVLTE 1138

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+      + +  ++ AL S F+  +K+     L   L K     +E+  +IAE  N+ +
Sbjct: 1139 LILENVLAEYEPEEIVALLSAFVFQEKTENVPTLTPRLEKG----KEAIIRIAEKVNDLQ 1194

Query: 863  LEVNVDEYVE------STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            ++  V +  E      S  R  L +V+Y W+KG +F  +  +TD+ EG+I+R+  RLDE 
Sbjct: 1195 IQYQVIQSSEDSNDFASQPRFGLAEVVYEWAKGMSFNRITDLTDVMEGTIVRTITRLDET 1254

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              ++R AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1255 CREVRNAAKLVGDPTLYAKMQHAQELIKRDVIFAASLYM 1293


>gi|239615085|gb|EEQ92072.1| DEAD/DEAH box RNA helicase [Ajellomyces dermatitidis ER-3]
          Length = 1295

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 346/982 (35%), Positives = 525/982 (53%), Gaps = 113/982 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 333  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 392

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F+DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 393  IKALSNQKFRDFRTTFEDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 452

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 453  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 512

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKIGGRREN--- 298
             RP PL+HY++      ++ +VD  + F E      D+ +  +D    QK    + N   
Sbjct: 513  KRPVPLEHYLW--ADKSMHKIVDSNKNFIEKGWKKADDILSGRDKLRAQKAAEAQSNTNN 570

Query: 299  ---------------GKASGRMAKGGSGSGGS---------------------------- 315
                           G   G   +GG+   GS                            
Sbjct: 571  RGGHGDRGRGGQPQRGNQRGGAQRGGTQQRGSAQQRGRGQPVSRGTGNIARTGRGGGRTT 630

Query: 316  -----DIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                 +I+  +V+ + +    P  +F FS+R CE++A S+S  DF T  EK T+  + + 
Sbjct: 631  VAQDRNIWVHLVQHLRKENLLPACIFVFSKRRCEENADSLSNQDFCTASEKSTIHMIIEK 690

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            ++  L  EDR LP I  +  LL RGI VHH GLLP+IKE+VE+LF + LVK LFATETFA
Sbjct: 691  SLARLKTEDRGLPQIRRVRELLSRGIGVHHGGLLPIIKEIVEILFAKTLVKVLFATETFA 750

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQM 486
            MGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    DE  
Sbjct: 751  MGLNLPTRTVVFSGFRKHDGRSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVASGKDEAP 810

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
               TL+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+ 
Sbjct: 811  PAGTLRRMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEH 868

Query: 547  GKKV----SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
             K+V    + LE+      A  + ++   H+  ++ ++L  KL   +     V   L S 
Sbjct: 869  QKQVQLSEASLEKIKREPCAICDIDMETCHEAAVEYSRLTTKLHINL-HASPVGRRLFSA 927

Query: 603  RLIKV--REGGTDWGWGVVVNVVKKPSAGVGTL------PSRGGGYIVPVQLPLISTLSK 654
            + + V  + G    G      +   P+ G+          SR    I+P  LP    L  
Sbjct: 928  KTVVVFKKNGIRTVGMLARDGMAPGPNLGLQVFEFGPISASRHPSDILPY-LPAFRHLFS 986

Query: 655  IRLSVPPDLR------PLDARQSILLAVQELESRFPQGLPK--LNPVKDMKIEDPEVVDL 706
               + P ++       PL+  + +   V ++      G P   LN  K M + +    D 
Sbjct: 987  PLSTNPNEMVLKTYKIPLEDLECVTTTVVKI------GGPTWYLNIKKGMILWEASAWDE 1040

Query: 707  V--NQIEELEHKLFAHPLNKSQDENQI----RCFQ-----RKAEVNHEIQQLKSKMRDSQ 755
            +  ++++EL+       LN+ Q +  I     C Q     +  E+ H+  QL   M D  
Sbjct: 1041 LAWDRVKELQ---IVEILNQRQAQVAIVESSECLQCPEFLKHFEMQHDEWQL---MSDQN 1094

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            +Q   D  + R  VLK LG +D    VQLKG+ AC I + DEL++TEL+    F + +  
Sbjct: 1095 LQLLPD-YEQRILVLKDLGFVDEASRVQLKGKVACEIHSADELVLTELILENVFAEYEPE 1153

Query: 816  QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTV 875
            ++ AL S F+  +K+     L   L K  + + + + K+ + Q + ++ ++ ++  +   
Sbjct: 1154 EIVALLSAFVFQEKTESVPTLTPRLEKGKEAIIKISEKVNDFQIQHQVILSSEDSNDFAS 1213

Query: 876  RP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
            +P   L++V+Y W++G +F  +  +TD+ EG+I+R   RLDE   ++++AA+ VG+  L 
Sbjct: 1214 KPRFSLVEVVYEWARGMSFNRITDLTDVMEGTIVRVITRLDETCREVKSAAKLVGDPTLY 1273

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
             K   A E ++R ++F+ SLY+
Sbjct: 1274 SKMQQAQELIKRDVIFAASLYM 1295


>gi|254579014|ref|XP_002495493.1| ZYRO0B12650p [Zygosaccharomyces rouxii]
 gi|238938383|emb|CAR26560.1| ZYRO0B12650p [Zygosaccharomyces rouxii]
          Length = 1253

 Score =  521 bits (1341), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 333/976 (34%), Positives = 525/976 (53%), Gaps = 112/976 (11%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 300  ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAKRNMTKTIYTSPIK 359

Query: 130  ALSNQKYRELHQEFKDVG--LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F+DVG  L+TGDV ++P A CL+MTTEILR MLYRG++++++V +VI
Sbjct: 360  ALSNQKFRDFRETFEDVGVGLITGDVQINPEAGCLIMTTEILRSMLYRGADLIRDVEFVI 419

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 420  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 479

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM-- 305
             RP PL+  V+    + +  V++  +QF E NF K ++  L     G +ENG  S     
Sbjct: 480  KRPVPLEINVW--AKNEMIPVINSNKQFLEANFKKHKE--LLDGKPGSKENGTGSSAASR 535

Query: 306  --------------------AKGGSGSGGSDIFK-----------IVKMIMERKFQPVIV 334
                                  G  GS  S  FK           +V  +  +   P +V
Sbjct: 536  GGSARGGRGGRGGSARGGFRGAGAVGSNKSKFFKKSGPNKKTWPELVNHLRSKDLLPAVV 595

Query: 335  FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
            F FS++ CE++A  +  ++F    E+  +    + +V  L +EDR LP I  +  LL+RG
Sbjct: 596  FVFSKKRCEEYADWLEGVNFCNGRERSQIHMFIEKSVTRLRKEDRELPQIIKIRSLLERG 655

Query: 395  IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
            IAVHH GLLP++KEL+E++F +GL++ LFATETFAMGLN+P +TVVF+ ++K DG   R+
Sbjct: 656  IAVHHGGLLPIVKELIEMVFAKGLIRVLFATETFAMGLNLPTRTVVFSEIEKHDGQGLRF 715

Query: 455  IGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            +  GE+ QM+GRAGRRG D  G  I+M   + + + + K++ +G P  L S FRL+Y  I
Sbjct: 716  LNPGEFTQMAGRAGRRGLDKTGTVIVMTYTDPLPVASFKEVTMGVPTKLESQFRLTYNMI 775

Query: 514  LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE-----V 568
            LNL+ R E     E +IK SF +   +  LP+  +K+ +L+++   +    + E     +
Sbjct: 776  LNLL-RIEA-LKVEEMIKYSFSENSKQTLLPEHEQKIKELQQKLQDVRTYDDCEYCKKDI 833

Query: 569  AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV-VKKPS 627
             ++    + + +    +M E+ + ++V   L  GRL+  R+   +   G V  + +KK S
Sbjct: 834  DQFLNSAIKLKECTAHMMEELVKTDKVYQVLRMGRLLLFRDENDNLKLGFVFRIHMKKSS 893

Query: 628  AGVGTLP-----SRGGGYIVPVQLPL-------ISTLSKIRL---SVPPDLRPLDARQSI 672
              V T         G    +P  + L        ST   +      +P     L    SI
Sbjct: 894  VIVMTFTEPNTLESGEPNHLPYMVNLSSYTKRNFSTFKTVEFFMEEIPITSIELTTAYSI 953

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH---------KLFAHPLN 723
             ++  +L  + P+ L         K+ D EV  ++   ++            K+  + L 
Sbjct: 954  KVSFTDLMKKQPEAL---------KMFDEEVRIILKIAQKFRESTSEKQGSLKVHQYVLE 1004

Query: 724  KSQDENQIRCFQ---------------RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
            ++  + +I  +Q               +   +  +I++L   M D  +    D  + R  
Sbjct: 1005 RNNIQKEISTYQALSCPNLAEHFVPKYKAFMIERDIKELYHLMSDQNLNLLPD-YEKRLA 1063

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VLK  G ID +  V LKGR AC I++G EL++TEL+ +    D +  ++ AL S F+   
Sbjct: 1064 VLKDAGFIDQNHNVSLKGRVACEINSGYELVITELILDNFLGDFEPEEIVALLSSFVYEG 1123

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST---------VRPFL 879
            ++ E+      +A P  +L    ++I EI +   LEV V+  +  T          R  +
Sbjct: 1124 RTREE---EPPVATP--RLARGKKRIEEIYSHM-LEVVVNHQIPLTQEEAEFLDKKRFAM 1177

Query: 880  MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            M+V+Y W++G +F E+++++   EG+++R    LDE   Q++ A+  +G  NL  K + A
Sbjct: 1178 MNVVYEWARGLSFKEIMEISVEAEGTVVRVITWLDEICRQVKTASIIIGNSNLHMKMSQA 1237

Query: 940  SESLRRGIMFSNSLYL 955
             E ++R I+F+ SLYL
Sbjct: 1238 QELIKRDIVFAASLYL 1253


>gi|409083626|gb|EKM83983.1| hypothetical protein AGABI1DRAFT_96933 [Agaricus bisporus var.
            burnettii JB137-S8]
          Length = 1103

 Score =  520 bits (1340), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 323/930 (34%), Positives = 502/930 (53%), Gaps = 71/930 (7%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAI +A +   R IYTSP+
Sbjct: 202  MAREYPFELDTFQKQAVYHLELGDSVFVAAHTSAGKTVVAEYAIGLAEKHMTRAIYTSPI 261

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+R+  Q F    VG++TGDV ++P A+CLVMTTEILR MLY+G++++++V +V
Sbjct: 262  KALSNQKFRDFKQTFSSSSVGILTGDVQINPEATCLVMTTEILRSMLYKGADLIRDVEFV 321

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ T
Sbjct: 322  IFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIST 381

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
              RP PL+HY++   G   + +VD K  F  + +   +D   +++   R   G A  +  
Sbjct: 382  LQRPVPLEHYLY--AGRDKFKIVDAKRTFLSNGYSDARDALRRKQDKEREAAGLAPVQAT 439

Query: 307  KGGS--------GSGGSDI-----------------------FKIVKMIMERKFQPVIVF 335
            +G           S GS +                         ++  + +    PV++F
Sbjct: 440  RGRGASARGGGANSRGSTLATRGRGGRGGGPARTIHADKNVYVHLLGHLKKENLLPVVIF 499

Query: 336  SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
            +FS++ CE++A ++   D  T  EK  V    + A+  L   D+ LP I  M  LL RGI
Sbjct: 500  TFSKKRCEENARTLMNADLCTSVEKSEVHVAIEKALSRLKGSDKKLPQIARMRDLLSRGI 559

Query: 396  AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
             +HH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPAK VVF+ ++K DG + R I
Sbjct: 560  GIHHGGLLPIMKEVVEILFARGLVKVLFATETFAMGVNMPAKCVVFSNIRKHDGRNFRDI 619

Query: 456  GSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
              GEY QM+GRAGRRG D  G  II+V + + E NTL  M+LG P  L+S FRL+Y  IL
Sbjct: 620  LPGEYTQMAGRAGRRGLDTTGTVIILVGDSIPEQNTLHTMLLGTPGKLMSQFRLTYNMIL 679

Query: 515  NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAE 570
            NL+ R E     E +IK SF +   ++ LP   KKV + E++ ++L          ++  
Sbjct: 680  NLL-RVEA-LRVEEMIKRSFSENSSQRLLPMNQKKVIESEKKLSTLQRLACEQCIPDIGA 737

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG-WGVVVNVVKKPSAG 629
            Y+    +   L +KL++   R  +    L  GR++ +R+     G  G+++      +  
Sbjct: 738  YYDDIHEAVNLNQKLINMAVRHPQGSKLLSPGRVVILRDNHFHPGNIGILLKAAPLQTLD 797

Query: 630  VGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
             G +      +++ +              V P+++  D        +  L +     L  
Sbjct: 798  SGRIDQNKTYFVLAL--------------VHPNVKSGDR------GITALSTILQDWLAN 837

Query: 690  LNPVKDM---KIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQ 745
              P+ ++   KI   +  +   Q + +  +  A    +  D  +       +  +   I 
Sbjct: 838  NEPIPEVDWSKIRALDFQETQRQRDLVRERNIARACLRCPDFSSHYAIIHGEKILRANIA 897

Query: 746  QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
             LK  + D  ++   D  + R  VLK L  ID +  V LKGR AC I++ +EL++TEL+ 
Sbjct: 898  HLKLAISDQNLELIPD-YEQRIEVLKDLKFIDENCTVLLKGRVACEINSANELVLTELIL 956

Query: 806  NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
              T  + +  +V AL SCF+  +K+  + ++   L +    +   +  ++ +Q+  K+  
Sbjct: 957  ENTLANYEPEEVVALLSCFVFQEKTEVEPSIPPRLQEGRDAILAISDSVSRVQDRNKV-- 1014

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
               E   S ++  L +V+Y W++G  F ++  +TD+ EG+I+R   RLDE   ++R AA+
Sbjct: 1015 -ASEEFRSELKFGLTEVVYEWAQGMPFEQITALTDVPEGTIVRCITRLDETCREVRDAAR 1073

Query: 926  AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +G+  L KK   A   ++R I+F+ SLY 
Sbjct: 1074 VIGDARLFKKMEEAQLKIKRDIVFAASLYF 1103


>gi|302308119|ref|NP_984927.2| AER067Cp [Ashbya gossypii ATCC 10895]
 gi|299789304|gb|AAS52751.2| AER067Cp [Ashbya gossypii ATCC 10895]
 gi|374108150|gb|AEY97057.1| FAER067Cp [Ashbya gossypii FDAG1]
          Length = 1282

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 344/966 (35%), Positives = 523/966 (54%), Gaps = 95/966 (9%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 332  ARTWPFELDIFQKQAIYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSTRNMTKTIYTSPIK 391

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  ++F DV  GL+TGDV ++ +A+CL+MTTEILR MLY+G++++++V +VI
Sbjct: 392  ALSNQKFRDFKEDFDDVSVGLITGDVQINADANCLIMTTEILRSMLYKGADLIRDVEFVI 451

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA+WI     +  +V+ T 
Sbjct: 452  FDEVHYVNDQDRGVVWEEVIIMLPSHVKFILLSATVPNTFEFADWIGRTKHKNIYVLSTP 511

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK-------QKIGGRREN-- 298
             RP PL+  V+      +  V++E  +F   NF K  D           +K    R N  
Sbjct: 512  KRPVPLEINVW--AKDTMIPVINENREFLAKNFSKHADLLANSGSSNTAKKTASTRGNKA 569

Query: 299  ----GKASGRMAKGGSGSGG-----SDIFK-----------IVKMIMERKFQPVIVFSFS 338
                 KA+  + KG  G G      S  FK           +V  +  R   PV++F FS
Sbjct: 570  PTRGDKANKVITKGSRGVGAKGSNRSSFFKRDGPNKQTWPRLVNYLRSRDLLPVVIFVFS 629

Query: 339  RRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVH 398
            ++ CE +A  +   DF+T +E+  V    + ++  L +EDR++P I+ +  LL+RGIA+H
Sbjct: 630  KKRCEDYAGFLEGTDFSTAKERSQVYMFIEKSIARLKKEDRDVPQIQQVRSLLERGIAIH 689

Query: 399  HSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSG 458
            H GLLP+IKEL+E+LF +G VK LFATETFAMGLN+P +TVVF+ ++K DG+  RY+  G
Sbjct: 690  HGGLLPIIKELIEMLFAKGFVKVLFATETFAMGLNLPTRTVVFSEIEKHDGNGLRYLSPG 749

Query: 459  EYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
            E+ QM+GRAGRRGKD  G  I+M  +  +++ + KD+ LG P  L S FRL+Y  ILNL+
Sbjct: 750  EFTQMAGRAGRRGKDKVGTVIVMSYNHPLDVTSFKDVTLGVPTRLKSQFRLTYNMILNLL 809

Query: 518  SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
             R E     E +IK SF +   +  LP+   KV  L E+   L+ S +       ++   
Sbjct: 810  -RIEA-LRVEEMIKYSFGENTKQNLLPEQELKVKALREK---LNESPDVNCMHCSQILDK 864

Query: 578  IAQLEKK-------LMSEITRPERVLYYLGSGRLIKVREGGTDWGWG------------V 618
              +L  +       +++E      +   L  GRLI  R+   +   G            V
Sbjct: 865  AVELTTRHRDSIRGIITEANSRNILFGLLRQGRLIVYRDSDNNAKLGFVFRNDASSNRCV 924

Query: 619  VVNVVKKPSAGVG---TLP----------------SRGGGYIVPVQLPLISTLSKIRLSV 659
            VV+  K      G    LP                      +  V    I  +S+  L+V
Sbjct: 925  VVSFTKPCCLSDGKPNNLPYLTICRRFVKKAFQPLKLAPATMESVPFENIELISRYHLNV 984

Query: 660  P-PDLRPLDARQSILLAVQELESRFPQGLPKLNPVK-----DMKIEDPEVVDLVNQIEEL 713
               DL  L+  Q    A QE         PKL P        +KI+   + D    ++E 
Sbjct: 985  SLADL--LNGDQKAKDAFQEKIQTVLHIAPKLKPADMDKHITLKIQQ-HLSDHATVVKEF 1041

Query: 714  EHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKL 773
              +L A    K  +   +R  + K E   EI  +   M +  +    D  + R  VLK+ 
Sbjct: 1042 -MELDACKCPKFAEHFAVRYSKYKIE--QEIADVVHLMSEQNLTLLPD-YEQRLAVLKEC 1097

Query: 774  GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ 833
            G ID+   V LKGR AC I++G EL +TEL+ +    D +  ++ AL S F+   ++ E+
Sbjct: 1098 GFIDSSNNVLLKGRIACEINSGFELALTELILDNFLGDFEPEEIVALLSAFVYEGRTKEE 1157

Query: 834  INLRM--ELAKPLQQLQESARKIAEIQNECKLEVNVD--EYVESTVRPFLMDVIYCWSKG 889
            + + +   LAK  +++++   ++       ++ +  D  E++E   R  +M+V+Y W++G
Sbjct: 1158 MPVVITPRLAKGKERIEQIYSQLMSTYETYQVPLTKDEAEFLEKK-RFAIMNVVYEWARG 1216

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
             +F  ++Q++   EG+I+R   RLDE   +L+ AA  +G+ NL  K   A E ++R I+F
Sbjct: 1217 LSFKAIMQISPEAEGTIVRVINRLDEVCRELKTAAVIIGDSNLHMKMTQAQELIKRDIVF 1276

Query: 950  SNSLYL 955
            + SLYL
Sbjct: 1277 AASLYL 1282


>gi|303389006|ref|XP_003072736.1| Ski2 ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
           50506]
 gi|303301878|gb|ADM11376.1| Ski2 ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
           50506]
          Length = 932

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 273/515 (53%), Positives = 349/515 (67%), Gaps = 44/515 (8%)

Query: 32  RNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERN 91
           RN TR   HE  +P+G        +   F  P+     AK Y FELD FQ++SV  LER+
Sbjct: 37  RNGTR---HEAVIPAGVDYV---PLPREFGKPI-----AKDYLFELDDFQKISVCSLERD 85

Query: 92  ESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTG 151
           ESVLVSAHTS+GKT VAEYAIAM+ ++ QRV+YTSP+KALSNQKYREL  EF DVGLMTG
Sbjct: 86  ESVLVSAHTSSGKTVVAEYAIAMSLKNSQRVVYTSPIKALSNQKYRELLSEFGDVGLMTG 145

Query: 152 DVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLP 211
           DVT++P A+CLVMTTEILR MLY+G EV++E+ W+IFDEIHYM+D+ERGVVWEE+II LP
Sbjct: 146 DVTINPTATCLVMTTEILRNMLYKGGEVVREIHWIIFDEIHYMRDKERGVVWEETIILLP 205

Query: 212 PAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDE 271
             ++MVFLSAT+ NA +FAEWICH+  Q  HVVYT+ R TPL HY      + LY + D 
Sbjct: 206 RHVRMVFLSATIPNALEFAEWICHIQSQVVHVVYTEKRVTPLVHY---FRSNKLYKIKDA 262

Query: 272 KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
           K  F + NF+    +  K+ IG  +E G+A    +                        P
Sbjct: 263 K--FHKSNFLSAMRSIQKRNIGP-KEVGEAISDAS-----------------------LP 296

Query: 332 VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
           V+VFSF R++CE+ AM + K  +    E + VE +F NA+  L +EDR +P I+ +LPLL
Sbjct: 297 VVVFSFRRKDCERFAMKLDK-SYLKDSEAEMVETIFTNAIMSLRKEDREIPIIQNILPLL 355

Query: 392 KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            RGI +HHSGLLP+IKE+VE+LFQEGL+K LFATETF++GLNMPAK+VVFTA+KK+DG+S
Sbjct: 356 MRGIGIHHSGLLPIIKEVVEILFQEGLLKVLFATETFSIGLNMPAKSVVFTALKKFDGES 415

Query: 452 HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
            R +  GEY QMSGRAGRRG D  GI I ++ E +    +  +       LVS FRL+Y 
Sbjct: 416 MRLVSPGEYTQMSGRAGRRGIDSMGIVISIISEPITYKEVNKLFSTSSDNLVSAFRLTYN 475

Query: 512 SILNLMSRAEGQFTAEHVIKNSFHQFQ-YEKALPD 545
            +LNLM R EG     ++I  SF+ FQ Y+KAL +
Sbjct: 476 MLLNLM-RVEG-LDPLYLISRSFYHFQSYKKALAE 508



 Score =  134 bits (337), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 111/197 (56%), Gaps = 8/197 (4%)

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
           E K   +VLKKL + D D  V +KGR AC I +GDEL++TE++FNG F  +       L 
Sbjct: 741 ECKKMIKVLKKLEYCD-DTTVLIKGRMACEISSGDELVLTEMIFNGDFAGIPVEHFVPLL 799

Query: 822 SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF--- 878
           SC +  +  S+   L  E     + L +S  K+ ++   C ++V+   Y+    R F   
Sbjct: 800 SCIVFEEWDSDNFVLSEENKLYYKLLSDSVEKVCKVLKSCSIDVDPTTYL----RKFSYE 855

Query: 879 LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
           LMDV+  W  G TF  +   T +FEGSIIR+ +RL+E L QL +AA+ +G   LE  FA 
Sbjct: 856 LMDVVRMWVCGHTFINICNKTSVFEGSIIRTFKRLEELLRQLSSAARVIGNTELENMFAL 915

Query: 939 ASESLRRGIMFSNSLYL 955
               ++R I+F+NSLY+
Sbjct: 916 GIVKIKRDIVFANSLYV 932


>gi|363750700|ref|XP_003645567.1| hypothetical protein Ecym_3257 [Eremothecium cymbalariae DBVPG#7215]
 gi|356889201|gb|AET38750.1| Hypothetical protein Ecym_3257 [Eremothecium cymbalariae DBVPG#7215]
          Length = 1274

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 336/988 (34%), Positives = 531/988 (53%), Gaps = 107/988 (10%)

Query: 54   EAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIA 113
            +  H    NP      A+T+ FELD FQ+ ++  +E+ +SV V+AHTSAGKT VAEYAIA
Sbjct: 308  DNFHELIPNP------ARTWPFELDGFQKEAIYHMEQGDSVFVAAHTSAGKTVVAEYAIA 361

Query: 114  MAFRDKQRVIYTSPLKALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRG 171
            M+ R+  + IYTSP+KALSNQK+R+  ++F DV  GL+TGDV ++  A+CL+MTTEILR 
Sbjct: 362  MSKRNMTKTIYTSPIKALSNQKFRDFKEDFTDVDVGLITGDVQINSEANCLIMTTEILRS 421

Query: 172  MLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAE 231
            MLYRG++++++V +VIFDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA 
Sbjct: 422  MLYRGADLIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPHHVKFILLSATVPNTYEFAT 481

Query: 232  WICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF---- 287
            WI    ++  +V+ T  RP PL+  ++      L  V+D+  +F    F K  D      
Sbjct: 482  WIGRTKQKNIYVISTAKRPVPLEINIW--AKDTLIPVIDQDRKFSLKAFKKHADLLTGVA 539

Query: 288  -------------LKQKIGGRRENGKASGRMAK---------GGSGSGGSDIF------- 318
                         + +   G R  GK + R  K         G  GS  S  F       
Sbjct: 540  SSKTIPRRGAAGAIDKNSSGTR-GGKTTNRGNKTITHGSRGVGAKGSNRSSFFRRDGPNK 598

Query: 319  ----KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
                K+V  +  R+  PV++F FS++ CE++A  +   DF+T +EK  V    + ++  L
Sbjct: 599  QTWPKLVNYLKARELLPVVIFVFSKKRCEEYADFLESTDFSTAKEKSQVYMFIEKSISRL 658

Query: 375  NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
             +EDR+LP I  +  LL+RGIA+HH GLLP++KEL+E+LF +G VK LFATETFAMGLN+
Sbjct: 659  KKEDRDLPQIMKIRSLLERGIAIHHGGLLPIVKELIEMLFAKGFVKVLFATETFAMGLNL 718

Query: 435  PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKD 493
            P +TVVF+ ++K DG+S R +  GE+ QM+GRAGRRGKD  G  IIM  +  ++    K+
Sbjct: 719  PTRTVVFSEIEKHDGNSLRTLNPGEFTQMAGRAGRRGKDPIGTVIIMTYNNPIDELPFKE 778

Query: 494  MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
            + LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP   KKV  L
Sbjct: 779  VTLGVPTRLKSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENSKQNLLPKHEKKVKIL 836

Query: 554  E---EEAASLDAS-GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR- 608
            +   E+  +++ S    ++    + KL   +  + ++ E      ++  L  GRL+  R 
Sbjct: 837  QEVLEKEPNVECSICNQDIDTAVEFKLKFGKCTQDILKEANNNRVLVRMLKVGRLVGYRD 896

Query: 609  -EGGTDWGWGVVVNVV------------------KKPSAGVGTLPSRGGGYIVPVQL--P 647
             +G    G+   VN+                   K  S      P+    +  P  +  P
Sbjct: 897  NDGNMKLGFIFSVNLANSGCTVLSFSSPCTLKDGKVNSLPFFNYPNYANKFFQPFNVSEP 956

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL----NPVKDMKIEDPEV 703
            L+  +    + +      +    +I+    E +  F +   KL    + ++++ IE  + 
Sbjct: 957  LLENILLEDIELIAHYYFVTPLANIINGDPEAKEAFYKKTLKLTAKAHTLRELNIE--KY 1014

Query: 704  VDLVNQIEELEHKLFAHPLNKSQDENQIRCFQ------------RKAEVNHEIQQLKSKM 751
            ++L  Q   +E +   H      D   ++C +            RK  +  +I+     M
Sbjct: 1015 INLKIQQYLMEQRKTVH------DFLNLKCLECDNFPEHFGQRYRKYGIEQQIKDTYHLM 1068

Query: 752  RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
             D  +    D  + R  VL++ G I +D  V LKGR AC I++G EL++TEL+ +    D
Sbjct: 1069 SDQNLNLLPD-YEQRLAVLRECGFIASDNTVLLKGRVACEINSGYELVLTELILDNFLGD 1127

Query: 812  LDHHQVAALASCFIPVDKS--SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD- 868
             +  ++ AL S F+   ++   EQ+     LAK +++++E   ++ E     ++ +  + 
Sbjct: 1128 FESEEIVALLSIFVYEGRTRQDEQLVTTPRLAKGIKRIEEIYTRLLETYEMYQVPLTKEE 1187

Query: 869  -EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
             E++E   R  L++V+Y W++G  F  +++++   EG+I+R+  RLDE   +++ AA  +
Sbjct: 1188 AEFLERN-RAALINVVYEWARGLPFRSIMEISVEAEGTIVRTITRLDEVCREVKIAASII 1246

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G+ +L  K   A E ++R I+F+ SLYL
Sbjct: 1247 GDSSLNLKMCQAQELIKRDIVFAASLYL 1274


>gi|340377094|ref|XP_003387065.1| PREDICTED: helicase SKI2W [Amphimedon queenslandica]
          Length = 1177

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 340/949 (35%), Positives = 515/949 (54%), Gaps = 84/949 (8%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA T+ FELD FQ+ ++  LE +E+V VSAHTSAGKT VAEYAIA++   K R IYTSP+
Sbjct: 248  MAHTWPFELDNFQKQAILRLESHENVFVSAHTSAGKTVVAEYAIALSLSHKTRTIYTSPI 307

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+ +    F +  +GL+TGDV ++    CL+MTTEILR MLY GS+V+++V WV
Sbjct: 308  KALSNQKFHDFRGTFGESAIGLVTGDVQINKEGPCLIMTTEILRSMLYHGSDVIRDVEWV 367

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            +FDE+HY+ D ERGVVWEE +I LP  ++++ LSAT+ N  +FA+W+    ++  HVV T
Sbjct: 368  VFDEVHYINDTERGVVWEEVLIMLPDHVRLILLSATVPNTMEFADWVGRTKQRKIHVVST 427

Query: 247  DFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
              RP PLQHY++  G S      L+++V E ++F    +        KQ +  +R++ + 
Sbjct: 428  LQRPVPLQHYLY-TGNSKHTQEELFMIVGEDKKFIVPGY--------KQALEAKRKSDEK 478

Query: 302  SGRMAKGGSGSGGS-------DIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD 353
            SG   KGG+   G        ++++ +V ++ ++   P++ F+FS++ C+ +A S++ LD
Sbjct: 479  SG--PKGGAKGRGQLTTAQERNVWQSLVNLLKKKDNLPLVAFTFSKKRCDDNANSLTNLD 536

Query: 354  FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
              T+E+K  ++  F+ +V  L   DR LP +  M  LLKRGI VHHSG+LP+IKE++E+L
Sbjct: 537  LTTREDKHKIDSFFKKSVSILKGSDRELPQVVWMKDLLKRGIGVHHSGILPIIKEIIEML 596

Query: 414  FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
            F +GLVK LFATETFAMG+NMPA+TV F A++K DG+ +R +  GEY+QM+GRAGRRG D
Sbjct: 597  FGQGLVKLLFATETFAMGVNMPARTVAFDAIRKHDGNRNRELYPGEYVQMAGRAGRRGLD 656

Query: 474  DRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
              G  II+    + E   L  M+LG P  L S FRL+Y  ++N++ R +     E V+  
Sbjct: 657  TTGTVIILCKTDVPESGDLVKMILGSPGVLESQFRLTYSMLMNIL-RVQS-LRVEEVMMK 714

Query: 533  SFHQFQYEKALPDIGKKVSKLEEEAASLDA------SGEAEVAEYHKLKLDI----AQLE 582
            SF +    K   D   ++ ++E   +S+D+      +G+ E+       LDI    A   
Sbjct: 715  SFAELDLVKHHGDHTHQLKEVESMMSSIDSVLCQLCTGDIELYYEQCRLLDILMSNAHYN 774

Query: 583  KKLM-----------------------SEITRPERVLYYLGSGRLIKVREGGTDWGWGVV 619
            K L+                       S+ +    VL   G+   I + +  + W   VV
Sbjct: 775  KSLLPGRCVILQTNDYKYIPALLLRHNSDQSYTALVLCNHGNDPPISLVDSKSTW---VV 831

Query: 620  ----VNVVKKPSAGVG-TLPSRGGGYIVPVQLPLIS-TLSKI-----RLSVP--PDLRPL 666
                +N +  PS G   TL    G  +V V   +IS  + KI        +P   D  P 
Sbjct: 832  PYSPINALHVPSDGPSHTLLKVKGREVVAVLKKVISLDVQKILRDCENREIPRFKDNPPA 891

Query: 667  DARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA-HPLNKS 725
            D     +  ++E              V +  ++  E  +L  + E +E  L +   L   
Sbjct: 892  DVTGRAIEVLREFGEG--GAKGGGAEVMEFNVKSLEYAELKREKERIEETLSSCQCLKCP 949

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            Q        ++KA +  +   LK K+ +  +Q F  E   +  VLK  G I  D  V LK
Sbjct: 950  QFIEHFDRTRQKAILIEKRSDLKFKLSEKSLQ-FLPEYHQKLDVLKYFGFISNDCTVNLK 1008

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
            GR +C I T  E+++TEL+F       +  ++AAL S  +         +L   L +   
Sbjct: 1009 GRVSCEIHT-HEIIITELLFRNFLRQYEPAEIAALLSSMVLQQSHCSDPSLTDRLKQGRD 1067

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
             +   A++IAE++    L+ +V++Y +   +  L +V+Y W+KG  F  VIQ+TD+ EG 
Sbjct: 1068 HILSVAKEIAEVEISFGLQASVEDY-QREFKFGLTEVVYQWAKGEEFINVIQLTDVSEGV 1126

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            I++  +RLDE    +  A + VGE  L       S  LRR I+F+ SLY
Sbjct: 1127 IVKCVQRLDELCRDIGKACKLVGEKQLSLLMEEVSVLLRRDIIFAASLY 1175


>gi|91086489|ref|XP_970674.1| PREDICTED: similar to antiviral helicase SKI2 [Tribolium castaneum]
          Length = 1177

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 327/967 (33%), Positives = 532/967 (55%), Gaps = 103/967 (10%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA  + FELD FQ++++  LE++  V V+AHTSAGKT VAEYAIA++ +   R IYTSP
Sbjct: 230  EMAYEFPFELDTFQKLAILQLEQHNHVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSP 289

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+  +EFKDVGL+TGD  ++  ASCL+MTTEILR MLY GS++ +++ +VI
Sbjct: 290  IKALSNQKYRDFKKEFKDVGLITGDFQINQTASCLIMTTEILRSMLYCGSDITRDLEYVI 349

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ DRERG VWE+ +I LP  + +V LSAT+ N  +FA+W+   H++  +V+ T 
Sbjct: 350  FDEVHYINDRERGHVWEQVLILLPAHVCVVLLSATVPNTIEFADWLGRTHQRKVYVITTY 409

Query: 248  FRPTPLQHYVFP-VGGS---GLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
             RP PL H+++   GG+     YLV++  E ++   +     +    K+  +    +A  
Sbjct: 410  KRPVPLLHFLYTGTGGASRDNRYLVLN-SEGWKMGGYAAAVASL--PKVDPKSAYPQAKS 466

Query: 304  RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
            +               +V  +  +   P++ F+FSR +C+Q+A ++  LD  TQ+EK  +
Sbjct: 467  QYYNFTPKQEKVLWNGLVDHLNRKNLLPIVAFTFSRAKCDQNAENLMSLDLTTQKEKAQI 526

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               F+  V  L E DRN+P I  M  +L +GI VHHSG+LP+IKE+VE+LFQ+GL+K LF
Sbjct: 527  HMFFEKCVRSLKEPDRNIPQILRMRNILHKGIGVHHSGVLPIIKEIVEMLFQKGLIKLLF 586

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETFAMG+NMPA+TVVF ++ K DG   R +   EYIQM+GRAGRRG D  G  II+  
Sbjct: 587  ATETFAMGVNMPARTVVFDSITKHDGQERRNLKPAEYIQMAGRAGRRGLDSEGTVIILCK 646

Query: 484  EQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
             ++ ++  L+ M+LG P  L S FRL+Y  +L+L+ R E   + E ++  SF +  ++K 
Sbjct: 647  NKIPKVEELQAMMLGTPNVLQSQFRLTYGMVLSLL-RVES-LSVEGMMSRSFREADHQKK 704

Query: 543  LPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            + D   ++ ++E+E   L     +S    + +++       +  KK +  +    +++  
Sbjct: 705  MVDKQNELLEVEKEIRDLCTQELSSYLQPLVKFYNCASSYLEARKKCLDNVMSSPKLIKV 764

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVV--KKPSAGVGTLP---------------------- 634
            L  GR+I +          +++++V  KKP+  V  L                       
Sbjct: 765  LTPGRIILITHKSHVNKLALLLSIVRGKKPTYKVLVLTDSKPEIKEEKNDLWYKMIGLAS 824

Query: 635  -------SRGGGYIVPVQLPLISTLSKIRLSVPPDL-------------RPLDARQSILL 674
                   S  G  I+ +    I  ++   + V  DL             R     Q+   
Sbjct: 825  DNIYAPGSSPGHAILTIPTEDIFEITHKTVKVDTDLVIKDWEKRQIERFRNDPVGQTCQQ 884

Query: 675  AVQEL--------ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ 726
            A+QEL        E++  + L  L+ ++D+K+ + ++ D +  + + +  L  H      
Sbjct: 885  AIQELHKFTISVNEAKNQEKLSYLHLIQDLKVNEHQIHDDLQVVYKFKDILIDH-----L 939

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLK 771
               QI  F+         QQ  S    + +++ RD+LK               NR  +L+
Sbjct: 940  PSTQIPNFE---------QQFASVFTRTFLERKRDDLKHYLSSASLSLYPDYENRIELLR 990

Query: 772  KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC--FIPV-- 827
             L ++D    VQLKGR AC +   +ELL+TEL+       L   +VAAL S   F P   
Sbjct: 991  TLKYVDLQNRVQLKGRVACEMGM-NELLITELVLRNILTKLQPAEVAALLSALVFSPKKD 1049

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
            ++  E +++  +L K ++++Q   ++IA++  E  L++  DE+ ++ +   L++++Y W+
Sbjct: 1050 NREEETVHITDDLTKAMKEMQNIHQEIAKL--EMNLDIKTDEF-QNDLNFALIEIVYEWA 1106

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
                FA+++ +TDI EG I+R  ++L++ +  +R AA+ +G+  L+ K   AS +++R I
Sbjct: 1107 SAKPFADIMCLTDIQEGIIVRCIQQLNDTICDVRNAARIIGDPELQNKMEEASAAIKRDI 1166

Query: 948  MFSNSLY 954
            +F+ SLY
Sbjct: 1167 VFAASLY 1173


>gi|303279194|ref|XP_003058890.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460050|gb|EEH57345.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 946

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 330/933 (35%), Positives = 506/933 (54%), Gaps = 55/933 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+ F LD FQ+ +   LERNE V V+AHTSAGKT VAEYA A+A +   R IYTSP+K
Sbjct: 19  ARTFPFALDSFQKEAAYRLERNECVFVAAHTSAGKTVVAEYAFALASKHCTRAIYTSPIK 78

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            +SNQK+R+  ++  DVGL+TGDV++ P A CL+MTTEILR MLYRG++++++V WVIFD
Sbjct: 79  TISNQKFRDFTKDGFDVGLLTGDVSIRPEAPCLIMTTEILRSMLYRGADLIRDVEWVIFD 138

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ D ERGVVWEE II LP  + +V LSAT+ N  +FA+W+    ++  +V  T  R
Sbjct: 139 EVHYVNDAERGVVWEEVIIMLPEHVGLVLLSATVPNVWEFADWVGRTKRKKVYVTGTTRR 198

Query: 250 PTPLQHYVFPVGGSGL-YLVVDEKEQFREDNFVKLQDTFLKQK-----IGGRRENGKASG 303
           P PL+H ++  G S   +  V E+E F    + K  D   K K       G    G    
Sbjct: 199 PVPLEHMLYFGGDSEEDFYKVGEREAFLPAGYKKAADALNKSKKKPPGGAGAAPQGGPGA 258

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
             A G  G   S   ++++ +  R   P++VF+FS+R C+    S++ LD     EK  +
Sbjct: 259 VAAAGARGRDKSVWTELIRNLERRDLLPMVVFAFSKRRCDTMVDSLTGLDLTGGAEKHEI 318

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               +  +  L+  DR LP +  +  LL+RG+ VHH+GLLP++KE+VE+LF  GL+K LF
Sbjct: 319 HVFCERCLSRLSPPDRKLPQVLRVRELLRRGLGVHHAGLLPIVKEIVEMLFCRGLLKVLF 378

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
           +TETFAMG+N PA++V F  ++K DG   R I  GEY QM+GRAGRRG D  G  II   
Sbjct: 379 STETFAMGVNAPARSVCFQDLRKHDGSEFRGILPGEYTQMAGRAGRRGLDPVGTVIIAAW 438

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           D     + +++++ GK   L S FRL++  ILNLM R E     E ++  SF +F  ++ 
Sbjct: 439 DNFPTESVVRNLLAGKATKLQSQFRLTFGMILNLM-RVE-DLRVEDMLARSFAEFHAQRG 496

Query: 543 LPD----------IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRP 592
           + D            K+V+ L  E  + D  G A    +      +     ++ + +   
Sbjct: 497 VMDKRAGLALDVAALKRVNHLAAEEEASDIVGWAAAEAHEHASAAVRHAAAEVRAAVLTS 556

Query: 593 ERVLYYLGSGRLIKVREGGTDWG-WGVVVNVVKK----------------PSAGVGTLPS 635
           +  +  + +GR++ +  GG D    G ++ +                   P +    L S
Sbjct: 557 KGGIAAMTAGRVLLIAGGGGDIDKHGALLRIKGGKRGGGGSEDARIEGPMPPSLPWRLSS 616

Query: 636 RGGGYIVPVQLPLISTLSKIRLSVPPDL-----RPLDA-------RQSILLAVQELESRF 683
            G  Y+V   +P  S L+     +P +       P D          +   A+  LE   
Sbjct: 617 AGMDYLVRA-VPFDSVLAITEAKIPVEQGALLEAPTDGSSPPPAAAAAAARALSALEKTL 675

Query: 684 PQGLP-KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNH 742
             G P  L+PVKD+K+ D   V+L ++   L  +L   P  ++           + E+  
Sbjct: 676 SNGSPAALHPVKDLKLADVAAVELCHEHSRLVSRLPPLPPLRAWHA----LLDARRELQK 731

Query: 743 EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
            +   +  + D+ +Q+  D  + R +VL+ +G++D D  V LKGR AC I TGDEL+ TE
Sbjct: 732 RVDDAEYNLSDANLQQMPD-FETRVQVLQTMGYLDEDRTVTLKGRVACEIATGDELVGTE 790

Query: 803 LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
           ++F+G   DL   +  A+ +  +  +K++    L   L +  ++ +E A    E Q +  
Sbjct: 791 IIFDGVLRDLPPEEAVAVLAALVFQEKNASAPELHGSLLEACERSKELAFLAGEEQLKKG 850

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           L +  DEYV +T+R  L +V+  W+KG  F+++  +TD+ EGSI+R+  RLDE    +R 
Sbjct: 851 LAIAPDEYVTTTLRFGLTEVVNEWAKGTLFSDICTITDVQEGSIVRTIVRLDEMCRDVRN 910

Query: 923 AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           AA+ +G+  L +K   AS +++R I+FS SLY+
Sbjct: 911 AARIMGDSALYEKMEQASAAIKRDIVFSASLYV 943


>gi|365991078|ref|XP_003672368.1| hypothetical protein NDAI_0J02330 [Naumovozyma dairenensis CBS 421]
 gi|343771143|emb|CCD27125.1| hypothetical protein NDAI_0J02330 [Naumovozyma dairenensis CBS 421]
          Length = 1310

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 339/994 (34%), Positives = 532/994 (53%), Gaps = 130/994 (13%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 339  ARTWPFELDTFQKQAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 398

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F+DV  GL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 399  ALSNQKFRDFKETFEDVDIGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 458

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 459  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 518

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
             RP PL+  ++      L  V+  + +F + NF K      K+ + G   + KA+    K
Sbjct: 519  KRPVPLEINIW--ASKQLIPVISPQREFLDSNFKKH-----KELLSGSTSSMKAADNPKK 571

Query: 308  GGS--------------------------------------------GSGGSDIFK---- 319
              +                                            GS     F+    
Sbjct: 572  QAANSKRSGQNGGGRGGSTNSRGGGQRGGNRGGNRGGLRGSRGAGAVGSNKRQFFQKSAP 631

Query: 320  -------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
                   +V  +  +   P++VF FS++ CE++A  +  ++F   +EK  V    +N++ 
Sbjct: 632  NKKTWPDLVNFLKAKDLLPMVVFVFSKKRCEEYADWLEGINFCNAKEKSQVHMFIENSIT 691

Query: 373  CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
             L +EDR LP I  +  LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGL
Sbjct: 692  RLKKEDRELPQIMKIRNLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGL 751

Query: 433  NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTL 491
            N+P +TVVF+ ++K DG   R +  GE+ QM+GRAGRRG D  G  I+M   E ++  + 
Sbjct: 752  NLPTRTVVFSEIRKHDGTGLRDLTPGEFTQMAGRAGRRGLDKTGTVIVMSYTEPLQPASF 811

Query: 492  KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVS 551
            K++ LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +   P+  KK+ 
Sbjct: 812  KEVTLGIPTKLESQFRLTYNMILNLL-RIEA-LKVEEMIKYSFSENTKQTLKPEHEKKIK 869

Query: 552  KLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
            +L+E+  ++        + ++ +  +  +   +   K+MSE+++ + +   L  GRLI  
Sbjct: 870  ELQEKLTTIKEIPCEKCDQDIDKLLEASVKYRECTSKMMSELSKTDAIFRVLRVGRLILF 929

Query: 608  REGGTDWGWGVVV-NVVKKPSAGVGTLP-----SRGGGYIVPVQLPLISTLSKIRLS--- 658
            R+   +   G +  N VK  S+ V T+      S G     P  LP +S  SK   +   
Sbjct: 930  RDANDNLKLGFIFRNNVKDSSSVVMTISNPNTLSNGK----PNHLPYLSDESKFTTTNFK 985

Query: 659  ----VPPDLRPLDARQSILLAVQELESRF-------PQGLPKLNPVKDMKIEDPEVV--- 704
                +   +  +D     L+++  L + F       P+ + K N       E+ ++V   
Sbjct: 986  KFEGITYFMENVDFSSIELISLYTLRAHFTDIMKNEPEAVEKFN-------EEVQLVLRV 1038

Query: 705  --DLVNQIEELEHKLFAHPLNKSQDEN---------QIRC------FQRKAE---VNHEI 744
               L + + E    L AH  N  + +N          I C      F  K E   VN EI
Sbjct: 1039 SRKLKDTVSEKRGSLKAHQ-NALERQNIKEEIMKLKSITCPKLAEHFVPKFEQYKVNEEI 1097

Query: 745  QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
            + L   M D  +    D  +++  VLK  G ID +  V LKGR AC I++G EL++TEL+
Sbjct: 1098 KDLFHLMSDQNLNLLPD-YEHKLDVLKSAGFIDQNKNVLLKGRVACEINSGYELVLTELI 1156

Query: 805  FNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEIQNECK 862
             +    D +  ++ AL S F+   ++ E+ +  +   LAK  +++QE   ++  +  + +
Sbjct: 1157 LDNFLGDFEPEEIVALLSVFVYEGRTREEESPVVTPRLAKGKKRIQEIYAEMLSVYEKHQ 1216

Query: 863  LEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            + +  +E      + F LM+V+Y W++G +F E++ ++   EG+++R   RLDE   +++
Sbjct: 1217 IPLTQEEAEFLDKKRFALMNVVYEWARGLSFKEIMDISPEAEGTVVRVITRLDEICREVK 1276

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             A+  +G   L  K   A E ++R I+F+ SLYL
Sbjct: 1277 TASIIIGNSTLHMKMGRAQELIKRDIVFAASLYL 1310


>gi|405122095|gb|AFR96862.1| translation repressor [Cryptococcus neoformans var. grubii H99]
          Length = 1255

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 342/1011 (33%), Positives = 522/1011 (51%), Gaps = 150/1011 (14%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMAK Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 272  EMAKDYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 331

Query: 128  LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+    F+   VG++TGDV ++   SCL+MTTEILR MLY+G++++++V +
Sbjct: 332  IKALSNQKFRDFKTTFEPSTVGILTGDVQINAEGSCLIMTTEILRSMLYKGADLIRDVEF 391

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 392  VIFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 451

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
            T  RP PL+H+++   G   + +V  + +F  + +    D   +              Q+
Sbjct: 452  TPMRPVPLEHFLW--AGRETHRIVSSQSKFLMEGYSSASDALRRKQDKEREANGLPPLQR 509

Query: 292  IGGRR---------ENGKAS--GRMAKG------GSGSG--------------------- 313
             GGR            GK++   R+  G      G G+G                     
Sbjct: 510  TGGRGGASMRAKDLPTGKSAPFTRIGAGRNHTNRGGGNGPPQAAFGGGRGGRGGGRGGFG 569

Query: 314  ---------GSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                       +I+  ++  + +    PV+ F FS++ CE++A ++S LD  T +EK  V
Sbjct: 570  GSSRPSHVLDQNIWTHLISYLKKNTLLPVVNFVFSKKRCEEYAQTLS-LDLCTAKEKSEV 628

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               ++ A+  L  ED+ LP I  M  LL RGI VHH GLLP++KE+VE+LF  GLVK LF
Sbjct: 629  HITWERALTRLKGEDKTLPQILRMRELLGRGIGVHHGGLLPLVKEVVEILFARGLVKVLF 688

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
            ATETFAMG+NMPAK+VVF+ ++K DG S R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 689  ATETFAMGVNMPAKSVVFSGIRKHDGTSFRNLLPGEYTQMAGRAGRRGLDTTGTVIILSG 748

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            DE   +  L +M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K 
Sbjct: 749  DELPSVEELNEMMLGVPNRLSSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENATQKM 806

Query: 543  LPDIGKKVSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
             P+  + +++ E+E A L         A++  ++ L  + ++L  + +   +   +    
Sbjct: 807  APEQQRVIAQTEKELAKLPKLECDVCNADIDAFYNLSTEASRLNAQFLKRASWSNQSGKL 866

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLS 658
               GR++ +R         V++     P+ G    P      I   ++ ++ T       
Sbjct: 867  FVPGRVVVLRNAHFPGNLAVILG--NHPNLG----PDGQRSDIKAFRILVLVT------- 913

Query: 659  VPPDLRPLDARQSILLAVQELESRFPQGLPK---LNPVKDMKIEDPEVV----------- 704
                  P        L+V+EL  R+P  LPK    +P  +  + D   +           
Sbjct: 914  ------PGQKSGKEDLSVEELTPRWPPILPKGSFPSPTAERTVVDTSSISFYDFHRLNSR 967

Query: 705  -----------DLVNQIEELE------------------HKLFAHPLNKSQDENQIRC-- 733
                       DL    EEL                     L     N +   +++ C  
Sbjct: 968  ESPSDIQQALDDLTKLHEELSVLPELPEADWSRLRDIDIQSLLKERTNAAGRLSKLGCQL 1027

Query: 734  ---FQRKAEVNHEIQQLKSKMRDSQIQ------KFRDELKNRSRVLKKLGHIDADGVVQL 784
               F       HE +Q++ +++  ++Q      +   + ++R  VLK+L  ID +  V L
Sbjct: 1028 CGDFADHYATLHERKQVEQRIQKLKLQLSDQNLELLPDYESRVEVLKRLSFIDENATVLL 1087

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR AC I++  EL++TEL+      D    +V AL S F+ V+K+  Q  +  +L   L
Sbjct: 1088 KGRVACEINSAPELILTELILENILADYTPEEVVALLSIFVFVEKTESQPIIPTKLQDGL 1147

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
              +   A ++   Q+ C  +V  DE+  +  +P L++V+Y W++G  F E+  +TD+ EG
Sbjct: 1148 DVIYNIAEQVEREQDYC--QVQHDEFA-TKYKPGLVEVVYEWARGMPFNEITNLTDVPEG 1204

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +I+R   RLDE   ++R AA+ +G+ +L KK   A   +RR I+F+ SLYL
Sbjct: 1205 TIVRLITRLDETCREVRDAARVIGDADLFKKMEEAQGLIRRDIVFAASLYL 1255


>gi|401624563|gb|EJS42619.1| ski2p [Saccharomyces arboricola H-6]
          Length = 1285

 Score =  514 bits (1323), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 324/971 (33%), Positives = 528/971 (54%), Gaps = 92/971 (9%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 322  ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 381

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++ +A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 382  ALSNQKFRDFKETFGDVDIGLITGDVQINSDANCLIMTTEILRSMLYRGADLIRDVEFVI 441

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 442  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 501

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG------------- 294
             RP PL+  ++      L  V++   +F + NF K ++        G             
Sbjct: 502  KRPVPLEINIW--AKKELIPVINPNSEFLDANFRKHKEILNGDSTKGGPSKSDSGRGGSS 559

Query: 295  -----------------RRENGKASGRMAKGGSGSGGSDIFK--------------IVKM 323
                                    + R    G+G+ GS+  K              I+  
Sbjct: 560  ARGGRGGTNTRGGRGGRGNSARGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPDIINY 619

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +++  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 620  LRKKELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 679

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I  +  LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 680  ILKIRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 739

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 740  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIGTFKEVTMGVPTRL 799

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 800  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKLLQEELQTIEY 857

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L        +M E+ +   VL+ L  GRL+  R+       G 
Sbjct: 858  KNCEICDNDIGKFLELMLSYKDATVNMMQEMVKSPSVLHILKEGRLVAFRDTNNCLKLGF 917

Query: 619  VVNVVKKPSAGV-------GTLPS-----------------------RGGGYIVPVQLPL 648
            V  V  K +  V        TLP+                       R   Y+  V +  
Sbjct: 918  VFKVSLKDAICVIMTFTKPYTLPNGESNNLLYFPNSGYRNRNFPKFERTDFYMEEVPVSA 977

Query: 649  ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            I  ++K + + P  L  +  + S  L+  E E+        L    +++ +  ++  ++ 
Sbjct: 978  IEVITKRKFNTP--LGKVMKKDSTALSEFESETNSIFEGKTLKETINIEKQGLKIHQILL 1035

Query: 709  QIEELEHKLFAHPLNKSQDENQIRCFQRKAEV-NHEIQQLKSKMRDSQIQKFRDELKNRS 767
                ++ ++F     K  + ++    + KA V   +I++L   M D  +    +  K R 
Sbjct: 1036 DRTNIKDEIFKLKSTKCPNLSEHIVPRYKAHVIEDKIKELYHLMSDQNLSLLPNYEK-RL 1094

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
             VL   G ID +  V LKGR AC I++G EL++TEL+ +    + +  ++ AL S F+  
Sbjct: 1095 AVLNDTGFIDENHNVLLKGRVACEINSGYELVLTELILDNFLGNFEPEEIVALLSVFVYE 1154

Query: 828  DKSSEQIN--LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIY 884
             K+ E+ +  +   LAK  Q+++E  +K+ E+ +  ++ +  DE      + F +M+V+Y
Sbjct: 1155 GKTREEESPIVTPRLAKGKQRIEEIYKKMLEVFSTHQIPLTQDEAEFLDRKRFAMMNVVY 1214

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W++G +F E+++M+   EG+++R    LDE   +++ A+  +G   L  K + A E ++
Sbjct: 1215 EWARGLSFKEIMEMSPEAEGTVVRVITWLDEICREVKTASIIIGNSTLHMKMSRAQELIK 1274

Query: 945  RGIMFSNSLYL 955
            R I+F+ SLYL
Sbjct: 1275 RDIVFAASLYL 1285


>gi|367014127|ref|XP_003681563.1| hypothetical protein TDEL_0E01090 [Torulaspora delbrueckii]
 gi|359749224|emb|CCE92352.1| hypothetical protein TDEL_0E01090 [Torulaspora delbrueckii]
          Length = 1257

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 335/977 (34%), Positives = 533/977 (54%), Gaps = 110/977 (11%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 300  ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 359

Query: 130  ALSNQKYRELHQEFKDVG--LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F+DVG  L+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 360  ALSNQKFRDFKETFEDVGVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 419

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 420  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 479

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
             RP PL+  ++    + L  V+   ++F + NF K +D           ++ K+     +
Sbjct: 480  KRPVPLEINIW--AKNQLIPVISSNKEFLDSNFKKHKDLLAGAPPKDDTKDAKSGRGGGR 537

Query: 308  G-------------------------GSGSGGSDIFK-----------IVKMIMERKFQP 331
            G                           GS  S  +K           IV  +  +   P
Sbjct: 538  GGQRGGLRGGPRGGQRGGRGGSRGAGAIGSNKSQFYKRGGPSKKTWPDIVNYLKSKDLLP 597

Query: 332  VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
             +VF FS++ CE++A  +  ++F   +EK  +    + +V  L +EDR LP I  +  LL
Sbjct: 598  AVVFVFSKKRCEEYADWLEGVNFCNGKEKSQIFMFIEKSVTRLKKEDRELPQILKIRSLL 657

Query: 392  KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            +RGIAVHH GLLP++KEL+E+LF +GL++ LFATETFAMGLN+P +TV+F+ ++K DG  
Sbjct: 658  ERGIAVHHGGLLPIVKELIEMLFAKGLIRVLFATETFAMGLNLPTRTVIFSEIQKHDGTG 717

Query: 452  HRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
             R +  GE+ QM+GRAGRRG D  G+ I+M  +E ++  + K++ +G P  L S FRL+Y
Sbjct: 718  LRNLAPGEFTQMAGRAGRRGLDKMGLVIVMAYNEPIQSASFKEVTMGVPTKLQSQFRLTY 777

Query: 511  YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL---DASG-EA 566
              ILNL+ R E     E +IK SF +   +  LP+  +K+++LEE+   L   D SG   
Sbjct: 778  NMILNLL-RIEA-LKVEEMIKYSFSENSKQTLLPEQERKINELEEKMEELQLYDKSGSNV 835

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP 626
            ++ ++    +   +   ++M E+ + + + + L  GRLI  R+   +   G V     K 
Sbjct: 836  DMDKFLDAVVRFRKATSQMMEELAKTDAIFHALKVGRLIVFRDADDNARLGFVFRTNMKD 895

Query: 627  SAGV-------GTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDAR----QSILLA 675
            ++ V        TL S    +     LP I+ L+K  +S   + +  +      Q + L 
Sbjct: 896  NSAVVMTFTQPNTLSSGESNH-----LPYIAGLAKYTVS---NFKRFEGTKYFMQEVPLT 947

Query: 676  VQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI-----------EELEHK---LFAHP 721
              EL + +     K++    MK +D  V    +++           E L  K   L  H 
Sbjct: 948  SIELITAYTL---KISFTDIMKKDDESVKKFEDEVKIILKISQRLKESLAEKKGSLKVHQ 1004

Query: 722  --LNKSQDENQIRCFQ---------------RKAEVNHEIQQLKSKMRDSQIQKFRDELK 764
              L ++  +N+I   Q               +   +  EI  L+  M D  +    D  +
Sbjct: 1005 QILERNNIKNEILSCQVINSPDLAEKFLPKYKAFMIKDEINNLRHLMSDQNLNLLPD-YE 1063

Query: 765  NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
             R  VLK  G ID +  V LKGR AC I++G EL++TEL+ +    D +  ++ AL S F
Sbjct: 1064 KRLAVLKDAGFIDQNHNVLLKGRVACEINSGYELVLTELILDNFLGDFEPEEIVALLSVF 1123

Query: 825  IPVDKSSEQ----INLRMELAKPLQQLQESARKIAEIQNECKLEVNVD--EYVESTVRPF 878
            +   ++ E+    I  R  LA+  ++++E   ++ ++    ++ +  D  E++E   R  
Sbjct: 1124 VYEGRTREEEPPIITPR--LARGKKRIEEIYTQMLKVYETHQIPLTRDEAEFLERK-RFA 1180

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            LM+V+Y W++G +F E++ ++   EG+++R    LDE   +++ A+  +G  NL  K + 
Sbjct: 1181 LMNVVYEWARGLSFKEIMDISLEAEGTVVRVITWLDEICREVKTASIIIGNSNLHMKMSQ 1240

Query: 939  ASESLRRGIMFSNSLYL 955
            A E ++R I+F+ SLYL
Sbjct: 1241 AQELIKRDIVFAASLYL 1257


>gi|384246155|gb|EIE19646.1| antiviral helicase [Coccomyxa subellipsoidea C-169]
          Length = 1038

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 322/970 (33%), Positives = 509/970 (52%), Gaps = 93/970 (9%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA  + FELD FQ+ ++  LER  SV V+AHTSAGKTAVAEYA+A+A +   R IYTSP+
Sbjct: 78   MAHHFPFELDNFQKEAIVHLERGHSVFVAAHTSAGKTAVAEYALALAAKHCTRAIYTSPI 137

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            K +SNQK+R+   +F +VGL+TGDV++ P + CL+MTTEILR MLY+G+++++++ WVIF
Sbjct: 138  KTISNQKFRDFSSDF-EVGLLTGDVSIKPESPCLIMTTEILRSMLYKGADIIRDIEWVIF 196

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++  +V  T  
Sbjct: 197  DEVHYVNDAERGVVWEEVIIMLPAHVNLILLSATVPNVMEFADWVGRTKRKRIYVTGTTK 256

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
            RP PL+H +F  G   LY +      F  +     ++ + K+    + E  K   R    
Sbjct: 257  RPVPLEHNLFYNG--ALYTIC-RANTFAPEGVAAARNAWKKKN--AKPETKKDEKRARPT 311

Query: 309  GSGSGG--------------------------------SDIFKIVKMIMERKFQPVIVFS 336
            G G GG                                S    ++  + ++   PV+VF 
Sbjct: 312  GRGDGGGPAQRGGRQPAGGGRGGRGGGSQGNSGLRSEKSAWMALIDDLKKKALLPVVVFC 371

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FS++  +  A ++S LD  T  EK  ++   + A+  L   DR LP I  +  +LKRG+ 
Sbjct: 372  FSKKRVDLLADNLSNLDLATAAEKSEIQVFCERALGRLRGADRELPQILRVREMLKRGLG 431

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TV+F +++K DG   R + 
Sbjct: 432  VHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVIFQSLRKHDGKEFRNLL 491

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            SGEY QM+GRAGRRG D  G  II   D+  E   LK ++ G+   L S FRL+Y  ILN
Sbjct: 492  SGEYTQMAGRAGRRGLDPVGTVIIACWDDVYEEGELKKLLTGRATKLESQFRLTYSMILN 551

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA---------SGEA 566
            L+ R E     E ++K SF +F  ++A P+  + +   ++  A+L A         +   
Sbjct: 552  LL-RVE-DLKVEDMLKRSFAEFHAQRAAPEALEGLRLGQQRLAALRARPWPSSFLGTCRE 609

Query: 567  EVAEYHKLKLDIAQLEKKLMSEITRPERVLY-YLGSGRLIKVREGGTDWG-WGVVVNVVK 624
             V +Y  L   I  L  + + E     R     L  GR++ V    T     G V     
Sbjct: 610  AVEQYFSLSQRIEALSSRDVQESVMGSRAASQALVPGRVVLVTNRSTGLPELGAVCGAPA 669

Query: 625  KPSAGV--GTLPSRG-------------------------------GGYIVPVQLPLIST 651
              S G+  G   S G                                 + + V    I  
Sbjct: 670  SASKGIQLGNTVSSGKQQNQESMRDENDQTNFSGKRSDHVNVDPGMACWSMQVDTSRIEA 729

Query: 652  LSKIRLSVPPD--LRPLDARQSILLAVQELE--SRFPQGLPKL-NPVKDMKIEDPEVVDL 706
            + + ++ + PD  L P +A Q +   V++L+     P+G P L +P+ D+K+   ++ + 
Sbjct: 730  ICRAKVKLNPDSVLDP-EATQGLAHVVRQLQQLQAGPEGQPALMDPIADLKLNQLDIAEA 788

Query: 707  VNQIEELEHKLFAHPLNKSQDENQIRCFQR-KAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            V + + L     +   ++     ++    R +A +   +  L  ++ D+ + +   E + 
Sbjct: 789  VRERQHLLQARSSMACHRDPGMGEMYAIVRSEALLAGRLAALAHQVSDASLAQM-PEFRQ 847

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R  VL+++ ++  D  VQ+KGR AC I++GDEL+ TE++F G   +L   +  AL S  +
Sbjct: 848  RVDVLRRMHYLAEDDTVQMKGRVACEINSGDELVATEMIFAGVLTELTPEEAVALLSALV 907

Query: 826  PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
                  E       LA         A +   +Q EC ++V  +EY    ++  L++V+Y 
Sbjct: 908  FQKSDVEAAAPTEALADACDHAVALAYEAGRMQQECGMDVLPEEYARGALKFGLVEVVYH 967

Query: 886  WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            W++G  F ++  +TD+ EGSI+R+  RLDE   +++ AA+ +G   L  +  AAS +++R
Sbjct: 968  WARGVPFKDICALTDVMEGSIVRAIVRLDETCREVKDAAKVMGSTALVAQMEAASAAIKR 1027

Query: 946  GIMFSNSLYL 955
             ++F+ SLY+
Sbjct: 1028 DVIFAASLYV 1037


>gi|366999174|ref|XP_003684323.1| hypothetical protein TPHA_0B02170 [Tetrapisispora phaffii CBS 4417]
 gi|357522619|emb|CCE61889.1| hypothetical protein TPHA_0B02170 [Tetrapisispora phaffii CBS 4417]
          Length = 1270

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 327/972 (33%), Positives = 524/972 (53%), Gaps = 99/972 (10%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+ + FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 312  ARIWPFELDVFQKEAIYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 371

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 372  ALSNQKFRDFKETFDDVEIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 431

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 432  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 491

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------LKQKIGGRREN-- 298
             RP PL+  ++    + L  V++ K +F E NF K ++         +++ +   +EN  
Sbjct: 492  KRPVPLEISIWT--KNVLVPVINPKREFLESNFKKHKNLIEGTTSDKVQKTLSHSKENST 549

Query: 299  -------------GKASGRMAKGGSGSGG-----SDIFK-----------IVKMIMERKF 329
                         G   G M  G  G+G      S  FK           I+  +  +  
Sbjct: 550  RGGARGGARGVSRGGTRGSMRGGSRGAGAIGSNKSQFFKRSGPNKKTWSGIIDYLRGKDL 609

Query: 330  QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
             P ++F FS++ CE++A  +  + F + +EK  +    + ++  L +EDR LP I  +  
Sbjct: 610  LPAVIFVFSKKRCEEYADWLDAVSFCSNKEKSQIHMFIEKSITRLKKEDRELPQILKIRS 669

Query: 390  LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
            LL+RGIAVHH GLLP++KEL+E+LF +GL+K LFATETFAMGLN+P +TV+F+ ++K D 
Sbjct: 670  LLERGIAVHHGGLLPIVKELIEILFSKGLIKVLFATETFAMGLNLPTRTVIFSELQKHDV 729

Query: 450  DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRL 508
            +  R +  GE+ QM+GRAGRRG D  G  I+M   E +  +  K++ LG P  L S F+L
Sbjct: 730  NGLRSLTPGEFTQMAGRAGRRGLDKIGTVIVMAYTEPLNQSVFKEVTLGIPTKLQSQFKL 789

Query: 509  SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEV 568
            +Y  ILNL+ R E  F  E +IK SF +   +   P+  K++ +L  E   +  S     
Sbjct: 790  TYNMILNLL-RIEA-FKVEEMIKYSFGENLKQTLQPEHEKQIKQLTSELQDIKQSSCNTC 847

Query: 569  AE----YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK 624
            AE    +  L + +  +   L  E+ + E+       GRLI  R+G  +   G +    K
Sbjct: 848  AEDIDKFLDLSISLKTVTSNLFEELGKSEKSYTVFRVGRLIVYRDGDDNAKLGFLYRTSK 907

Query: 625  KPSAGVGTL------PSRGGGYIVPVQLPLISTLSKI-RLSVPPDLRPLDARQSILLAVQ 677
                 V T       P     ++  ++       S I R +  P +      ++I  +  
Sbjct: 908  DNGVVVLTFTNPQTSPDGSANHLPYLEGNKEFNSSHIGRFTYSPYI-----LENIAFSQI 962

Query: 678  ELESRFPQGLPKLNPVKDMKIEDPEVVDLV-NQIEEL-------------------EHKL 717
            EL +++   +       D+  E+ E ++L+ N+I  +                    H+L
Sbjct: 963  ELVTKYILRI----SFTDIFNEEKEALELLDNEIRTILRISTKLMISSNQSSGSVKVHQL 1018

Query: 718  FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN-----------R 766
                 N ++     +C +     +H   +    + DS+I+     + N           R
Sbjct: 1019 LLEQSNITKQILTCKCIKCANFASHYKPKYDKYLIDSKIKNLYHLMSNQNLTLLPEYENR 1078

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
             +VL + G ID +  V LKGR AC I+TG EL++TEL+ +    D +  ++ +L S FI 
Sbjct: 1079 LKVLHRTGFIDQNQNVTLKGRVACEINTGFELVITELILDNFLGDFEPEEIVSLLSAFIY 1138

Query: 827  VDKSSEQIN--LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVI 883
              +S ++    +   L K  Q+++E   ++ +I  E ++ +  +E     ++ F L++VI
Sbjct: 1139 EGRSRDEPPPIVTPRLIKGKQKIEEIYGRMLDIFAEEQITMTKEESEFLEMKRFGLINVI 1198

Query: 884  YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
            Y W++G +F E+++++   EG+++R   RLDE   Q++ AA  +G   L  K + A E +
Sbjct: 1199 YEWARGLSFKEIMEISIEQEGTVVRVITRLDEICRQVKTAAIIIGNSGLHSKMSQAQELI 1258

Query: 944  RRGIMFSNSLYL 955
            +R I+F+ SLYL
Sbjct: 1259 KRDIVFAASLYL 1270


>gi|349580095|dbj|GAA25256.1| K7_Ski2p [Saccharomyces cerevisiae Kyokai no. 7]
          Length = 1287

 Score =  511 bits (1315), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 333/999 (33%), Positives = 525/999 (52%), Gaps = 147/999 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGK--AS 302
             RP PL+  ++      L  V+++  +F E NF K ++    +   G   + +NG+  ++
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESANGAPSKTDNGRGGST 560

Query: 303  GRMAKGGS----GSGGSD------------------------IF-----------KIVKM 323
             R  +GGS    G GG D                         F           +IV  
Sbjct: 561  ARGGRGGSNTRGGRGGRDNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 800

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 801  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 858

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 859  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 918

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 919  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 953

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 954  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1008

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1009 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1068

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1069 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCV 1188

Query: 858  QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 1189 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1248

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1249 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|448111589|ref|XP_004201877.1| Piso0_001340 [Millerozyma farinosa CBS 7064]
 gi|359464866|emb|CCE88571.1| Piso0_001340 [Millerozyma farinosa CBS 7064]
          Length = 1225

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 339/975 (34%), Positives = 523/975 (53%), Gaps = 106/975 (10%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ ++  LE+ +SV V+AHTSAGKT +AEYAIAMA R+  + IYTSP
Sbjct: 270  DMAREFPFELDTFQQEAIYHLEQGDSVFVAAHTSAGKTVIAEYAIAMAKRNMTKAIYTSP 329

Query: 128  LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +
Sbjct: 330  IKALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEF 389

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D +RGVVWEE II LP  IK + LSAT+ N  +FA W+    ++   V+ 
Sbjct: 390  VIFDEVHYVNDIDRGVVWEEVIIMLPNHIKYILLSATVPNTFEFANWVGRTKQKDIFVIS 449

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQ------------DTFLKQ--- 290
            T  RP PL+  +F    + +Y  VD + +F E  F K +            +T L     
Sbjct: 450  TPKRPVPLE--IFIWAKNNMYKAVDSQRKFSETEFKKHKSALEGSNKNSRPNTVLSNGSR 507

Query: 291  --------------KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
                           +   R  G  S + A    G   S    +V+ +      PV++F 
Sbjct: 508  GGRGGTARGGNRGNNLSASRGRGNISQKNAFMRDGPNKSTWSSLVQHLRSSNLLPVVIFV 567

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
            FS+++CE++A ++  +DF T +EK  +      AV  L +EDR LP I  +  LL RGIA
Sbjct: 568  FSKKKCEEYADTLKGVDFCTGKEKSEIHNFIDKAVSRLRKEDRELPQIMKIRELLGRGIA 627

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHH GLLP++KE +E+LF + LV+ LFATETFAMGLN+P +TVVF++ +K DG   R + 
Sbjct: 628  VHHGGLLPIVKECIEILFSKSLVRVLFATETFAMGLNLPTRTVVFSSYRKHDGRGFRNLL 687

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             GE+ QMSGRAGRRG D  G  IIM  +E +     K++ LG P  L S FRL+Y  ILN
Sbjct: 688  PGEFTQMSGRAGRRGLDTTGTVIIMAYNEPLSPTDFKEITLGVPTKLHSQFRLTYNMILN 747

Query: 516  LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG----------- 564
            L+ R E     E +IK+SF +   +  LP+  ++V +L+ E   L+ +            
Sbjct: 748  LL-RIEA-LRVEEMIKHSFSENSTQTLLPEHQERVKELQVELDHLEVTHFDDCPADRVES 805

Query: 565  -----------------EAEVAEYHKLKL-------------DIAQLEKKLMSEITRPER 594
                             + + + Y K KL              + ++   L S+I     
Sbjct: 806  VYELLSEYDTVFKGIVEQVQQSPYMKNKLCRVGRLLCYDDANGVTRIGFFLRSDIMNNNM 865

Query: 595  VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV--GTLPSRGGGYIVPVQLPLISTL 652
            +L     G + +      D  W     +   P  G     +   GG  I  V L  I  +
Sbjct: 866  LLLTCNLGDVYENESKDLDLPW-----IPNHPFIGKFRNKMSYAGGLRIDSVSLDKIKFI 920

Query: 653  SK--IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP---EVVDLV 707
                ++ S+   LR  + + SI    +ELES   Q L      +++         + +L+
Sbjct: 921  GGFILKFSLKSILR--NEQTSI----EELESEIKQLLKFQRSWRELNFRQASQLNLYELL 974

Query: 708  NQIEELEHKLFAHPLNKSQDENQI--RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
            ++ ++LE +L +  +  S     +  +  +R A VN EI+ L+S + D  ++    E   
Sbjct: 975  DRKKDLEEQLNSSDIFDSTHFKDVYKQVSKRNAIVN-EIKSLQSLISDENLE-LLPEYTQ 1032

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R  VL+ L  ID    V LKGR AC I++G EL++TEL+ +    + +  ++ AL SCF+
Sbjct: 1033 RLEVLRSLEFIDQHHNVVLKGRVACEINSGWELIITELILDNFLGEYEPEEIVALLSCFV 1092

Query: 826  PVDKSSEQ----INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LM 880
               +++E+    +  R+E  +  +++   A K+ +I    ++ + ++E        F L+
Sbjct: 1093 YEGRNNEKEEPCVTPRLERGR--KRIMSIAEKLTKIYASKRITLTMEEEEFFERNRFALV 1150

Query: 881  DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
            +V+Y W++G +F E++Q++   EG+I+R   RLDE   Q++ AA  +G+  L  K + A 
Sbjct: 1151 NVVYEWARGMSFNEIMQISLEAEGTIVRVITRLDEVCRQVKNAALIIGDSILHLKMSEAQ 1210

Query: 941  ESLRRGIMFSNSLYL 955
            E ++R I+F  SLYL
Sbjct: 1211 EKIKRDIVFCASLYL 1225


>gi|364506256|pdb|4A4Z|A Chain A, Crystal Structure Of The S. Cerevisiae Dexh Helicase Ski2
           Bound To Amppnp
          Length = 997

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 331/999 (33%), Positives = 521/999 (52%), Gaps = 147/999 (14%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 33  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 92

Query: 130 ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 93  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 152

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 153 FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 212

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--------------- 292
            RP PL+  ++      L  V+++  +F E NF K ++    +                 
Sbjct: 213 KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 270

Query: 293 --GGRRENGKASGRMAKGGSGSGGSD----------------IF-----------KIVKM 323
             GGR  +    GR  +G S  GG++                 F           +IV  
Sbjct: 271 ARGGRGGSNTRDGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 330

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 331 LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 390

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 391 ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 450

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
           ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 451 IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 510

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
            S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 511 QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 568

Query: 563 SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                 + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 569 KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 628

Query: 619 VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
           V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 629 VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 663

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
            +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 664 ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 718

Query: 726 QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
           +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 719 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 778

Query: 769 VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
           V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 779 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 838

Query: 800 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
           +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 839 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCV 898

Query: 858 QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 899 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 958

Query: 917 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 959 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 997


>gi|427793717|gb|JAA62310.1| Putative nuclear exosomal rna helicase mtr4 dead-box superfamily,
            partial [Rhipicephalus pulchellus]
          Length = 1160

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 334/923 (36%), Positives = 519/923 (56%), Gaps = 65/923 (7%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A ++ FELD FQ+ ++A LE  +SV V+AHTSAGKT VAEYAIA++ R   R IYTSP+K
Sbjct: 265  AFSWPFELDTFQKKAIAHLENRDSVFVAAHTSAGKTVVAEYAIALSRRHMTRTIYTSPIK 324

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSN+KYR+  + F D+GL+TGDV ++  ASCL+MTTEILR MLY  S V+ ++ WVIFD
Sbjct: 325  ALSNEKYRDFKETFTDIGLITGDVQINKEASCLIMTTEILRSMLYNQSNVVADLEWVIFD 384

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E HY+ D +RGVVWEE +I LP  + +V LSAT+ NA   A WI  + ++  +V+ T  R
Sbjct: 385  ECHYINDPDRGVVWEEVLIMLPSHVGLVLLSATVPNALSLANWIGRIKERKLYVICTTQR 444

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
            P PL+H+++       +L++D   +F+  +++K            R+E  KA+       
Sbjct: 445  PVPLEHHLY--FNQETFLILDATNKFQTASYMK--------ACARRKETMKATRTYDDKT 494

Query: 310  SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
               G      +++ + +    P I F+ SRR C+++A  +  LD  T EEK  V +  QN
Sbjct: 495  RYQG------LIQHLRKADRLPAICFTLSRRRCDENAQLLQSLDLTTAEEKGAVRRFLQN 548

Query: 370  AVDC-LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             V   L+  D+ LP +  +  LL+ G  VHHSG+LP++KE VE+LFQ GLVK LFATETF
Sbjct: 549  NVIARLSRADQRLPQLRSLRGLLEAGFGVHHSGVLPILKEAVEMLFQRGLVKVLFATETF 608

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG S+R +   EYIQM+GRAGRRGKD  G  +++    + E
Sbjct: 609  AMGVNMPARTVVFDSIRKHDGISNRDLLPAEYIQMAGRAGRRGKDATGTVLLLCKGDVPE 668

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
             + L+ M+LG+P  L S FR++Y  ILNL  +A+     E ++++SF +   +     + 
Sbjct: 669  SSQLQAMMLGRPTELQSRFRVTYSMILNL--KAQANKRVEDMMRDSFRENSSQSQSLSLA 726

Query: 548  KKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY------YLGS 601
            ++ + LE E ++L A  E    +          LE++  + +T  E VL        L  
Sbjct: 727  ERCASLENELSAL-APIECTTCQELP----FELLEEEAAARVTAWEHVLAQPQAARCLSP 781

Query: 602  GRLIKVR--EGGTDWG--------------WGVVVNVVKKPSAGVGTLP-SRGGGYIVP- 643
            GRL+ VR  EG    G              W +  +  +  S+G  +LP        VP 
Sbjct: 782  GRLLLVRSPEGCNLLGALASLAPREKRLTLWALADS--QPLSSGKASLPWPLSKKVAVPD 839

Query: 644  -------VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPV 693
                   + +   S L     SV  D + +   Q   +  QEL       P GLP +N V
Sbjct: 840  AALSVQEMTVMFSSVLCIYAKSVKVDPKRMSQPQCRNVLGQELLEMVEAHPGGLPVINVV 899

Query: 694  KDMKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR 752
            K++++   E V+LV Q ++LE KL  +  L     E+     +R+  ++ E+++L+ ++ 
Sbjct: 900  KELRLSAMETVELVKQSQQLEEKLLQSQCLTCPLFESHFEQERRRRRLSEEVRKLQHQLS 959

Query: 753  DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
            +  +    D  ++    L+KLG+++  G + LKGR A  + +  E+++TEL+   +   L
Sbjct: 960  EESLASMPD-YRSHVLALEKLGYVEPSGTLTLKGRVARSL-SSHEVMLTELLLQESLLTL 1017

Query: 813  DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
               +VA L SCF+   +S++++ + + +   +++  E A KI  +Q E   +   +++VE
Sbjct: 1018 GAAEVAGLFSCFVYEQRSNDEVVIPLSMKAAVEKFVEVAHKIGRVQRESGFDEPAEQFVE 1077

Query: 873  STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
                  L +V+Y W++G  FA ++++T++ EG I+R  +RLDE L  ++ AA  VG   L
Sbjct: 1078 Q-FSFGLCNVVYHWARGMHFAHIMELTEVQEGIIVRCIQRLDELLKDVKTAAGIVGNPEL 1136

Query: 933  EKKFAAASESLRRGIMFSNSLYL 955
              K   AS  +RR I+F+ SLYL
Sbjct: 1137 RTKMEEASRLIRRDIVFAASLYL 1159


>gi|242017221|ref|XP_002429090.1| Helicase, putative [Pediculus humanus corporis]
 gi|212513954|gb|EEB16352.1| Helicase, putative [Pediculus humanus corporis]
          Length = 1184

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 324/962 (33%), Positives = 515/962 (53%), Gaps = 82/962 (8%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  Y+FELD FQ+ ++  LE + SVLV+AHTSAGKT +AEYAIA++ R   R IYTSP
Sbjct: 230  DMAFKYNFELDTFQKQAILKLEEHCSVLVAAHTSAGKTVIAEYAIALSQRHMTRTIYTSP 289

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    FKDVGL+TGD  ++   +CL+MTTEIL+ ML   +++++++ +VI
Sbjct: 290  IKALSNQKYRDFRNTFKDVGLITGDFQVNQTGTCLIMTTEILKSMLLAQNDIIRDLEYVI 349

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D +RG VWEE +I LP  + +V LSAT+ N  QFA+W+    +Q  +V+ T 
Sbjct: 350  FDEVHYINDFKRGHVWEEVVILLPSHVSIVMLSATVPNTLQFADWVGRTKQQKMYVISTT 409

Query: 248  FRPTPLQHYVFPVGGSG----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
             RP PL+H+++   G       +L++    +F++  +  L+    K+K   +++N     
Sbjct: 410  QRPVPLEHFLYTGSGGNSKDERFLILSATNEFQKKGY--LEAVEAKKKRESKQKN--VVK 465

Query: 304  RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
               + G     +    +++ + +    P++ F  S++ C+++A S+  +D  T +EK  V
Sbjct: 466  ERPQTGRKQDTTMWVALIEHLQKHDKLPIVAFILSQKRCDENASSLMSVDLTTAKEKSHV 525

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               FQ ++  L E D+ LP I  M  LL+ GI +HH G+LP++KE+VE+LFQE  VK LF
Sbjct: 526  RHFFQQSIQKLKEPDQTLPQILKMQKLLENGIGIHHKGILPILKEIVEMLFQERCVKILF 585

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETFAMG+NMPAKTVVF ++ K+DG   R +   EYIQM+GRAGRRG D  G  II+  
Sbjct: 586  ATETFAMGVNMPAKTVVFDSIHKYDGSEKRMLLPSEYIQMAGRAGRRGLDKTGTVIIICR 645

Query: 484  EQMEM-NTLKDMVLGKPAPLVSTFRLSYYSILNLMSR---AEGQFTAEHVIKNSFHQFQY 539
            E M   N L  ++ G P  + S FRL+Y  IL L  +   AEG+ T E ++ NSF +  +
Sbjct: 646  EDMPTENNLIQLMKGIPKKIESQFRLTYSVILKLERKKIVAEGRVTVEEMMANSFKEADH 705

Query: 540  EKALPDIGKKVSKLEEEAASLDASGEA-----EVAEYHKLKLDIAQLEKKLMSEITRPER 594
                    + + ++E   +SL+ + E      EV +   + LD  +    L S+I   ++
Sbjct: 706  IIKKKTYTQSLEQVENNLSSLEKTIEKNNVWEEVRDSCSILLDYIKNWAVLSSKIFTDKK 765

Query: 595  VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA-------------------------- 628
             L  +  GR++ +         G++++   K +                           
Sbjct: 766  GLKLVTPGRVVLLTHKSHINKLGIILSCEYKKNVKFKVLVLDNKIDKSKDNSETDKDFKS 825

Query: 629  -----------------------GVGTLPSRGGGYIVPVQLPLISTLSKIRLS------V 659
                                   GV T+ +     I  V   L+   SKI LS      +
Sbjct: 826  IENEWYKLIGLLNLNKIFVPDDLGVHTVITIDASDIFEVTTILLKIDSKIILSDWDNRQI 885

Query: 660  P--PDLRPLDARQSILLAVQELESRFPQGLPK---LNPVKDMKIEDPEVVDLVNQIEELE 714
            P   D  P    Q +L  + E+   +     K   LN +KD KI   E  D  N  E ++
Sbjct: 886  PRFRDNPPGQTFQRVLEELTEITHTYANSEEKIEYLNLLKDFKISSKE--DFKNFHELVK 943

Query: 715  HKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
             K      N   D  Q++ F +   +  + + LK  +    +  + D  K+R  VLK L 
Sbjct: 944  LKTKVCESNTLTDHEQLKKFFKLLCLEKKKENLKFLLSYQSMSLYSD-YKSRLAVLKMLN 1002

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQ 833
            ++D+   VQ+KG  AC + +  ELL+TEL+F    NDL   ++AAL SCF+    K +E 
Sbjct: 1003 YLDSKNSVQMKGNVACEM-SSQELLITELVFRNALNDLQPPEIAALLSCFVYQGKKKNEP 1061

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
            + L   L   + ++++ A+ + E +  C +        E  +   L+ V+Y W++   FA
Sbjct: 1062 LQLTATLEAGIARIKKIAKDVFEAEEICGVNQAEATGNEENMNFDLVPVVYEWAREKPFA 1121

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            +++ +TD+ EG I+R  ++L+E + +++ AA+ +GE  L++K   AS +++R I+F+ SL
Sbjct: 1122 QIMTLTDVQEGIIVRCIQQLNETIKEVKNAAKIIGEPTLQQKMEDASNAIKRDIVFAASL 1181

Query: 954  YL 955
            Y+
Sbjct: 1182 YM 1183


>gi|398366119|ref|NP_013502.3| Ski2p [Saccharomyces cerevisiae S288c]
 gi|8489004|sp|P35207.2|SKI2_YEAST RecName: Full=Antiviral helicase SKI2; AltName: Full=Superkiller
            protein 2
 gi|625114|gb|AAB82356.1| Ski2p: Antiviral protein [Saccharomyces cerevisiae]
 gi|285813803|tpg|DAA09699.1| TPA: Ski2p [Saccharomyces cerevisiae S288c]
 gi|392297900|gb|EIW08999.1| Ski2p [Saccharomyces cerevisiae CEN.PK113-7D]
          Length = 1287

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 331/999 (33%), Positives = 521/999 (52%), Gaps = 147/999 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--------------- 292
             RP PL+  ++      L  V+++  +F E NF K ++    +                 
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 560

Query: 293  --GGRRENGKASGRMAKGGSGSGGSD----------------IF-----------KIVKM 323
              GGR  +    GR  +G S  GG++                 F           +IV  
Sbjct: 561  ARGGRGGSNTRDGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 800

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 801  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 858

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 859  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 918

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 919  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 953

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 954  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1008

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1009 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1068

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1069 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCV 1188

Query: 858  QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 1189 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1248

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1249 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|256269132|gb|EEU04467.1| Ski2p [Saccharomyces cerevisiae JAY291]
          Length = 1287

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 332/1000 (33%), Positives = 524/1000 (52%), Gaps = 149/1000 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGKASGR 304
             RP PL+  ++      L  V+++  +F E NF K ++    +   G   + +NG+  G 
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRG-GS 559

Query: 305  MAKG----------------------------GSGSGGSDIFK--------------IVK 322
             A+G                            G+G+ GS+  K              IV 
Sbjct: 560  TARGGHGGSNTRGGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVN 619

Query: 323  MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
             + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP
Sbjct: 620  YLRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLP 679

Query: 383  AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
             I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F+
Sbjct: 680  QILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFS 739

Query: 443  AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAP 501
            +++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  
Sbjct: 740  SIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTR 799

Query: 502  LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
            L S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++
Sbjct: 800  LQSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIE 857

Query: 562  ASG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWG 617
                   + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G
Sbjct: 858  YKSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLG 917

Query: 618  VVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
             V  V  K +  V         +  P +LP                   +   + L+   
Sbjct: 918  FVFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFP 952

Query: 678  ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK------------- 724
            + +    +  PK         E P     V  IE +  + FA PL K             
Sbjct: 953  KADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFN 1007

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRS 767
            ++  N +     K  +N E Q LK           RDE+                 K ++
Sbjct: 1008 AETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKA 1067

Query: 768  RVLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDEL 798
             V+KK    L H+ +D  + L                         KGR AC I++G EL
Sbjct: 1068 HVIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYEL 1127

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAE 856
            ++TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  
Sbjct: 1128 VLTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLS 1187

Query: 857  IQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            + N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE
Sbjct: 1188 VFNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDE 1247

Query: 916  FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1248 ICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|427783323|gb|JAA57113.1| Putative nuclear exosomal rna helicase mtr4 dead-box superfamily
            [Rhipicephalus pulchellus]
          Length = 1142

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 330/923 (35%), Positives = 518/923 (56%), Gaps = 65/923 (7%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A ++ FELD FQ+ ++A LE  +SV V+AHTSAGKT VAEYAIA++ R   R IYTSP+K
Sbjct: 247  AFSWPFELDTFQKKAIAHLENRDSVFVAAHTSAGKTVVAEYAIALSRRHMTRTIYTSPIK 306

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSN+KYR+  + F D+GL+TGDV ++  ASCL+MTTEILR MLY  S V+ ++ WVIFD
Sbjct: 307  ALSNEKYRDFKETFTDIGLITGDVQINKEASCLIMTTEILRSMLYNQSNVVADLEWVIFD 366

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E HY+ D +RGVVWEE +I LP  + +V LSAT+ NA   A WI  + ++  +V+ T  R
Sbjct: 367  ECHYINDPDRGVVWEEVLIMLPSHVGLVLLSATVPNALSLANWIGRIKERKLYVICTTQR 426

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
            P PL+H+++       +L++D   +F+  +++K            R+E  KA+       
Sbjct: 427  PVPLEHHLY--FNQETFLILDATNKFQTASYMK--------ACARRKETMKATRTYDDKT 476

Query: 310  SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
               G      +++ + +    P I F+ SRR C+++A  +  LD  T EEK  V +  QN
Sbjct: 477  RYQG------LIQHLRKADRLPAICFTLSRRRCDENAQLLQSLDLTTAEEKGAVRRFLQN 530

Query: 370  AVDC-LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             V   L+  D+ LP +  +  LL+ G  VHHSG+LP++KE VE+LFQ GLVK LFATETF
Sbjct: 531  NVIARLSRADQRLPQLRSLRGLLEAGFGVHHSGVLPILKEAVEMLFQRGLVKVLFATETF 590

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+NMPA+TVVF +++K DG S+R +   EYIQM+GRAGRRGKD  G  +++    + E
Sbjct: 591  AMGVNMPARTVVFDSIRKHDGISNRDLLPAEYIQMAGRAGRRGKDATGTVLLLCKGDVPE 650

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
             + L+ M+LG+P  L S FR++Y  ILNL  +A+     E ++++SF +   +     + 
Sbjct: 651  SSQLQAMMLGRPTELQSRFRVTYSMILNL--KAQANKRVEDMMRDSFRENSSQSQSLSLA 708

Query: 548  KKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY------YLGS 601
            ++ + LE E ++L A  E    +          LE++  + +T  E VL        L  
Sbjct: 709  ERCASLENELSAL-APIECTTCQELP----FELLEEEAAARVTAWEHVLAQPQAARCLSP 763

Query: 602  GRLIKVR--EGGTDWG--------------WGVVVNVVKKPSAGVGTLP-SRGGGYIVPV 644
            GRL+ VR  EG    G              W +  +  +  S+G  +LP        VP 
Sbjct: 764  GRLLLVRSPEGCNLLGALASLAPREKRLTLWALADS--QPLSSGKASLPWPLSKKVAVPD 821

Query: 645  QLPLISTLSKIRLSV-----------PPDLRPLDARQSILLAVQELESRFPQGLPKLNPV 693
                +  ++ +  SV           P  +     R  +   + E+    P GLP +N V
Sbjct: 822  AALSVQEMTVMFSSVLCIYAKSVKVDPKRMSQPQCRNVLGQELLEMVEAHPGGLPVINVV 881

Query: 694  KDMKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR 752
            K++++   E V+LV Q ++LE KL  +  L     E+     +R+  ++ E+++L+ ++ 
Sbjct: 882  KELRLSAMETVELVKQSQQLEEKLLQSQCLTCPLFESHFEQERRRRRLSEEVRKLQHQLS 941

Query: 753  DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
            +  +    D  ++    L+KLG+++  G + LKGR A  + +  E+++TEL+   +   L
Sbjct: 942  EESLASMPD-YRSHVLALEKLGYVEPSGTLTLKGRVARSL-SSHEVMLTELLLQESLLTL 999

Query: 813  DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
               +VA L SCF+   +S++++ + + +   +++  E A KI  +Q E   +   +++VE
Sbjct: 1000 GAAEVAGLFSCFVYEQRSNDEVVIPLSMKAAVEKFVEVAHKIGRVQRESGFDEPAEQFVE 1059

Query: 873  STVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
                  L +V+Y W++G  FA ++++T++ EG I+R  +RLDE L  ++ AA  VG   L
Sbjct: 1060 Q-FSFGLCNVVYHWARGMHFAHIMELTEVQEGIIVRCIQRLDELLKDVKTAAGIVGNPEL 1118

Query: 933  EKKFAAASESLRRGIMFSNSLYL 955
              K   AS  +RR I+F+ SLYL
Sbjct: 1119 RTKMEEASRLIRRDIVFAASLYL 1141


>gi|259148376|emb|CAY81623.1| Ski2p [Saccharomyces cerevisiae EC1118]
 gi|365764188|gb|EHN05713.1| Ski2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
          Length = 1287

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 330/1000 (33%), Positives = 524/1000 (52%), Gaps = 149/1000 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGKA--- 301
             RP PL+  ++      L  V+++  +F E NF K ++    +   G   + +NG+    
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 560

Query: 302  ------------------------SGRMAKGGSGSGGSDIFK--------------IVKM 323
                                    + R    G+G+ GS+  K              IV  
Sbjct: 561  ARGGRGGSNTRGGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 800

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 801  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 858

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 859  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 918

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 919  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 953

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 954  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1008

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1009 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1068

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1069 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLSV 1188

Query: 858  QNECKLEVNVD--EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
             N  ++ +  D  E+++   R  +M+V+Y W++G +F E+++M+   EG+++R    LDE
Sbjct: 1189 FNTHQIPLTQDEAEFLDRK-RVAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDE 1247

Query: 916  FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1248 ICREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|190405440|gb|EDV08707.1| antiviral helicase SKI2 [Saccharomyces cerevisiae RM11-1a]
 gi|323353725|gb|EGA85581.1| Ski2p [Saccharomyces cerevisiae VL3]
          Length = 1287

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 330/999 (33%), Positives = 522/999 (52%), Gaps = 147/999 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGKA--- 301
             RP PL+  ++      L  V+++  +F E NF K ++    +   G   + +NG+    
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 560

Query: 302  ------------------------SGRMAKGGSGSGGSDIFK--------------IVKM 323
                                    + R    G+G+ GS+  K              IV  
Sbjct: 561  ARGGRGGSNTRGGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 800

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 801  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 858

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 859  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 918

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 919  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 953

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 954  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1008

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1009 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1068

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1069 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLSV 1188

Query: 858  QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 1189 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1248

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1249 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|151940919|gb|EDN59301.1| superkiller [Saccharomyces cerevisiae YJM789]
          Length = 1287

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 330/999 (33%), Positives = 522/999 (52%), Gaps = 147/999 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGKA--- 301
             RP PL+  ++      L  V+++  +F E NF K ++    +   G   + +NG+    
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 560

Query: 302  ------------------------SGRMAKGGSGSGGSDIFK--------------IVKM 323
                                    + R    G+G+ GS+  K              IV  
Sbjct: 561  ARGGRGGSNTRGGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 800

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 801  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 858

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 859  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 918

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 919  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 953

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 954  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1008

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1009 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1068

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1069 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLSV 1188

Query: 858  QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 1189 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1248

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1249 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|323303729|gb|EGA57515.1| Ski2p [Saccharomyces cerevisiae FostersB]
          Length = 1287

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 330/999 (33%), Positives = 522/999 (52%), Gaps = 147/999 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A+++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGKA--- 301
             RP PL+  ++      L  V+++  +F E NF K ++    +   G   + +NG+    
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 560

Query: 302  ------------------------SGRMAKGGSGSGGSDIFK--------------IVKM 323
                                    + R    G+G+ GS+  K              IV  
Sbjct: 561  ARGGRGGSNTRGGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 800

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 801  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 858

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 859  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 918

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 919  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 953

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 954  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1008

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1009 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1068

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1069 VMKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1128

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1129 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCV 1188

Query: 858  QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 1189 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1248

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1249 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1287


>gi|448527708|ref|XP_003869560.1| Ski2 protein [Candida orthopsilosis Co 90-125]
 gi|380353913|emb|CCG23425.1| Ski2 protein [Candida orthopsilosis]
          Length = 1243

 Score =  507 bits (1306), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 341/980 (34%), Positives = 519/980 (52%), Gaps = 108/980 (11%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 279  MARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAKRNMTKCIYTSPI 338

Query: 129  KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 339  KALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFV 398

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 399  IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 458

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR---------- 296
              RP PL+  +F    + L+ VVD   +F E  F K   + L+     ++          
Sbjct: 459  PKRPVPLE--IFISTKNKLFKVVDSNRRFLESEF-KAHKSLLEAGNSNKQLPSTTMGSGS 515

Query: 297  ------------------------------ENGKASGRMAKGGSGSGGSDIFKIVKMIME 326
                                           +G  SG    G  G   +   ++V  +  
Sbjct: 516  RGGPGGTARGGNRGVTRGRGSGRGGRGGSSNHGNFSGPKRFGTDGPNKNTWPELVHYMKS 575

Query: 327  RKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIEL 386
                P ++F FS+++CE +A S+  +DF T +EK  +      AV  L +EDR LP I  
Sbjct: 576  NNLLPAVIFVFSKKKCETYADSLHGVDFCTAKEKSEIHMFIDRAVGRLKKEDRELPQIIK 635

Query: 387  MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKK 446
            +  +L RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TVVF++ +K
Sbjct: 636  IREMLSRGIAVHHGGLLPIVKECIEILFAKTLVKVLFATETFAMGLNLPTRTVVFSSTRK 695

Query: 447  WDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVST 505
             DG + R +  GE+ QMSGRAGRRG D  G  I+M  +E +     K++ LG P  L S 
Sbjct: 696  HDGRAFRNLLPGEFTQMSGRAGRRGLDATGTVIVMAYNEALSPTDFKEVALGTPTKLQSQ 755

Query: 506  FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL----- 560
            FRL+Y  ILNL+ R E     E +IK+SF +   +  LP+  K+   L     SL     
Sbjct: 756  FRLTYNMILNLL-RIEA-LKVEEMIKHSFSENSTQVLLPENKKRHDVLTNTLGSLALTPC 813

Query: 561  DASGEAEVAEYHKLKLDIAQLEKKLMSEITR-PERVLYYLGSGRLIKVREGGTDWGWGVV 619
            D     ++ E   L  +   +  + + +I + P      L  GRL+  R+  +    G V
Sbjct: 814  DECNLKDIEETCILMFEYEDVYGQCVVDIHKSPILKSQLLKIGRLVCFRDKESIVRIGFV 873

Query: 620  VNVVKKPSAGVGTLPSRGGGY----------IVPVQLPLISTLSKIR-------LSVPPD 662
            V       +        G  Y           +P++  L+   +KI+       +SVP +
Sbjct: 874  VKSDSVNDSIFLLTFHHGREYETTQEQYKLPYLPIRSYLLKNFAKIKYSGGLKVVSVPYE 933

Query: 663  LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELE-------- 714
                  R ++ +++  +         K   VK  + +   ++ L N+++E+         
Sbjct: 934  NVNFICRYALRVSMNGIVEN------KHEEVKQAEEQITSILGLQNRLDEISFNQTKQIS 987

Query: 715  -HKLFAHPLNKSQDENQIRCF------QRKAE------VNHEIQQLKSKMRDSQIQKFRD 761
             H +     N     N ++ F      Q  AE      +  E++ L+  + D  +    D
Sbjct: 988  LHDMCVEKDNIFSKINDLKAFTCPNFKQHYAEYRKMRLLQMELEGLERLISDENLDLLPD 1047

Query: 762  ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
              + R  VL+ LG ID    V LKGR AC I++G EL++TEL+ +    D +  ++ AL 
Sbjct: 1048 -YEQRLEVLETLGFIDEKHNVVLKGRVACEINSGWELILTELVLDNFLGDFEPSEIVALL 1106

Query: 822  SCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE--YVESTV 875
            SCF+   ++ E+    I  R+E  K   ++ E A K+  +  E ++ +  +E  +VES  
Sbjct: 1107 SCFVYEGRTQEEEPPLITPRLEKGK--AKILEIADKLLRVFIEKRVSLTSEEEDFVESK- 1163

Query: 876  RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
            R  L++V+Y W+ G +F E+++++   EG+I+R   RLDE   +++ AA  +G+  L  K
Sbjct: 1164 RFALVNVVYEWANGLSFNEIMEISVESEGTIVRVITRLDEICREVKNAALIIGDSKLHLK 1223

Query: 936  FAAASESLRRGIMFSNSLYL 955
             A A E ++R I+F  SLYL
Sbjct: 1224 MAEAQEKIKRDIVFCASLYL 1243


>gi|225681486|gb|EEH19770.1| translation repressor [Paracoccidioides brasiliensis Pb03]
          Length = 1324

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 358/1017 (35%), Positives = 535/1017 (52%), Gaps = 155/1017 (15%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAI++A +   + IYTSP
Sbjct: 334  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAISLASKHMTKAIYTSP 393

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F+DVG++TGDV + P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 394  IKALSNQKFRDFRNTFEDVGILTGDVQIHPEASCLIMTTEILRSMLYRGADLIRDVEFVI 453

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 454  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 513

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKIGGRRENGKA 301
             RP PL+HY++      +  +VD  + F E      D+ +  +D    QK    + N   
Sbjct: 514  KRPVPLEHYLW--ADKSMLKIVDSNKNFIEKGWKKADDILSGRDKAHAQKAAESQPNHNR 571

Query: 302  SGRMA-------------KGGSGSGGS--------------------------------- 315
             G                +GG+  GG+                                 
Sbjct: 572  GGYGDRGRGGGQPQRGNQRGGTQRGGTQRGGAQQQRGGAQQRGRGQPASRGTGNIARTGR 631

Query: 316  -----------DIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                       +I+  +V+ + +    P  VF FS++ CE++A S+S  DF T  EK +V
Sbjct: 632  GGGRTTVAQDRNIWVHLVQHLRKENLLPACVFVFSKKRCEENADSLSNQDFCTVAEKSSV 691

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
              + + ++  L  EDR LP I  +  LL RG+ VHH GLLP++KE+VE+LF + LVK LF
Sbjct: 692  HMIVEKSLARLKPEDRILPQIRHVRELLSRGVGVHHGGLLPIMKEIVEILFAKTLVKVLF 751

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
            ATETFAMGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 752  ATETFAMGLNLPTRTVVFSGFRKHDGRSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVSS 811

Query: 483  --DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
              DE     TL+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +
Sbjct: 812  GKDEAPPAGTLRRMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQ 869

Query: 541  KALPDIGKKVS-------KLEEEAAS-----LDASGEAEVAEYHKLKLDIAQLEKKLMSE 588
              LP+  K+V        K++ E  +     ++A  EA V E+ +L    AQL   L+S 
Sbjct: 870  ALLPEHQKQVQVSEATLEKIKREPCAICDIDMEACHEAAV-EFSRL---TAQLHVNLLSS 925

Query: 589  ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------PSRGGGYIV 642
               P     +     ++  R G    G  V   V   P+ G+          SR    I+
Sbjct: 926  ---PVGRRLFSAKRVVVFKRNGIRTVGLLVREGVAPGPNLGLQVFEFGPMKSSRHPSDIL 982

Query: 643  PVQLPLISTLSKIR-LSVPPDLRPLD-ARQSILLAVQELE----SRFPQGLPK--LNPVK 694
            P        L + R L  P    P +   ++  +A+++LE    +    G P   LN  K
Sbjct: 983  PY-------LPEFRHLFSPLSTEPFEMVLKTYKIALEDLECVTSTVLKIGGPTWYLNIKK 1035

Query: 695  D-MKIEDPEVVDLV-------------NQIEELEHKLFAHPLNKSQDENQI-------RC 733
            + +K+   ++V +              ++++EL+       LNK +++  I       RC
Sbjct: 1036 EALKVAQKDLVPICCSWKTSSWNELEWDRVKELQ---VVEILNKRKEQEAIIEACECLRC 1092

Query: 734  --FQRKAEVNHE-------IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
              F +  E+ H+       I QLK  M D  +Q   D  + R  VLK LG +D    VQL
Sbjct: 1093 PQFLKHFEMQHDEWQVKENISQLKQLMSDQNLQLLPD-YEQRLLVLKDLGFVDEACRVQL 1151

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KG+ AC I + DEL++TEL+      + +  ++ AL S F+  +K +E + L   L   L
Sbjct: 1152 KGKVACEIHSADELVLTELILENVLAEYEPEEIVALLSAFVFQEK-TESVPL---LTPRL 1207

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVE------STVRPFLMDVIYCWSKGATFAEVIQM 898
            ++ +E+  KI+E  N+ +++  V    E      S  R  L++V+Y W++G +F  +  +
Sbjct: 1208 EKGKEAIIKISEKVNDFQIKHQVILSSEDSNDFASKPRFSLVEVVYEWARGMSFNRITDL 1267

Query: 899  TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            TD+ EG+I+R   RLDE   ++++AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1268 TDVMEGTIVRVITRLDETCREVKSAAKLVGDPTLYSKMQRAQEMIKRDVIFAASLYM 1324


>gi|195054683|ref|XP_001994254.1| GH11203 [Drosophila grimshawi]
 gi|193896124|gb|EDV94990.1| GH11203 [Drosophila grimshawi]
          Length = 1194

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 329/960 (34%), Positives = 522/960 (54%), Gaps = 98/960 (10%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 255  AMEFPFELDEFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 314

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR ML+ GS++ +++ +VIFD
Sbjct: 315  ALSNQKYRDFRKTFKDVGLLTGDLQIEPTASCLIMTTEILRSMLFCGSDITRDLEYVIFD 374

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 375  EVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTKKRKVYVISTLKR 434

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL HY++   G      ++L+VD + ++ + N+ K  +   K+++ G+ + G     +
Sbjct: 435  PVPLMHYLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVER--KKEMQGKSKGGGPKNYV 492

Query: 306  AKGGSGSGGSDIFKIVKMI--MERKFQ-PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
                  SG  D    + MI  ++R  + PV+ F+ SR  C+ +  ++  +D NT++EK  
Sbjct: 493  ------SGKQDQSTWIGMIDFLKRNNKMPVVAFTLSRNRCDANVAALQSVDLNTEKEKGA 546

Query: 363  VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            V++ F   +  L   DR +P +  +   L+RGI VHHSG+LP++KE+VE+LFQ GLVK L
Sbjct: 547  VQKFFLQCLAKLKPPDRTIPQVMTLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLL 606

Query: 423  FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM- 481
            FATETFAMG+NMPA+TV+F + KK+DG   R +  GEYIQM+GRAGRRG D+ G  I+M 
Sbjct: 607  FATETFAMGVNMPARTVIFDSYKKFDGIEMRILKPGEYIQMAGRAGRRGHDENGTVILMC 666

Query: 482  ---VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
               V   ME   L+ M+LG P  L S F L Y  IL +  R E     E ++K SF +F 
Sbjct: 667  KASVPPSME---LRPMILGLPEKLQSQFILRYAVIL-ICLRIES-IKVEDIMKFSFKEFN 721

Query: 539  YEKALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVL 596
             +  LP   K++   E++ A L   G+    +  +    ++  + + ++M  I    ++ 
Sbjct: 722  LKLQLPTQQKQLQLAEDKFAMLPTLGKHLEPLIYFCDKSVEYWKEKHRIMKFIVTQAKIQ 781

Query: 597  YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL----------------------- 633
              L  GR+I + +G       +++NV  K   G  T+                       
Sbjct: 782  KELKVGRIIVITQGKHYNKLAILLNV--KSVLGKDTIYKVLVLDHQFKSSDSDIVDRGEF 839

Query: 634  ---------------PSRGGGYIVPVQLPLIS----TLSKIRLSVPPDLRPLDARQ---- 670
                           P   GG+ V + +  I     T S I+L     +R  + RQ    
Sbjct: 840  YYKILSLTPQNKFFQPEGIGGHTV-LDIKAIDIINITKSTIKLDADVIIRNWEQRQLERF 898

Query: 671  -------SILLAVQELE------SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
                   +++ AV EL       +  P  +  +N  K++ ++    V +++ ++ L+ +L
Sbjct: 899  KDSPPGATVVKAVTELHQLNEAYNANPDSIKYINMSKEINVKADSEVAMLHYVDHLKRQL 958

Query: 718  ---FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
                 H      ++   + ++R+    H I++LK K     +  + D   N+ +VL+ L 
Sbjct: 959  DDVLPHTNIAGFEQEFAKVYERRVLEIH-IEELKFKNSAKNLTLYPDYC-NKLQVLRALN 1016

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
            +ID    V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K   + 
Sbjct: 1017 YIDELNEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKIQGEP 1075

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             +   L K +   ++    I   +  C+  +      ES +   L++V+Y W+K   FAE
Sbjct: 1076 FIPEPLKKCVAAFEQINDTILAEEQRCQASIQ----AESNLNFGLLEVVYEWAKNKPFAE 1131

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            ++++T++ EG I+R  ++LDE L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1132 IMKLTEVQEGIIVRCIQQLDETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1191


>gi|170034314|ref|XP_001845019.1| antiviral helicase SKI2 [Culex quinquefasciatus]
 gi|167875652|gb|EDS39035.1| antiviral helicase SKI2 [Culex quinquefasciatus]
          Length = 1216

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 334/968 (34%), Positives = 519/968 (53%), Gaps = 104/968 (10%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA  Y FELD FQ+ ++  LE +  V V+AHTSAGKT VAEYAIA++ +   + IYTSP
Sbjct: 259  EMAHRYPFELDIFQKQAIIKLEEHNHVFVAAHTSAGKTVVAEYAIALSKKHMTKTIYTSP 318

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+    F+DVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VI
Sbjct: 319  IKALSNQKYRDFKSTFEDVGLITGDIQIDPTASCLIMTTEILRSMLYCGSDITRDLEYVI 378

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D +RG VWEE +I LP  + +V LSAT+ N  +FA W+    K+  HVV T 
Sbjct: 379  FDEVHYITDADRGHVWEEVLILLPDHVCIVMLSATVPNTLEFANWVGKTKKKRVHVVSTP 438

Query: 248  FRPTPLQHYVFP-VGGSG---LYLVVDEKEQFREDNFVKLQDTFLKQKIGGR--RENGKA 301
             RP PL+HY++   GG     ++LVVDE+ +F  D F K      K+ I  R  +   K 
Sbjct: 439  KRPVPLKHYLYTGCGGKSKDDMFLVVDEQSKFLIDGFRK-----AKEAITARMSKNANKN 493

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            SGR A+       +    ++  + +    PV+ F+ SR  C+ +A ++   D  T  EK 
Sbjct: 494  SGRPAQFNQKQEQTLWVGLIDQLQKNDKLPVVAFTLSRNRCDNNANALMSCDLTTGREKY 553

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
             +   FQ  +  L   DR LP +  +   L+RGI +HHSG+LP++KE+VE+LF  GLVK 
Sbjct: 554  LITSFFQLCLQKLKPPDRMLPQVIQVQNCLQRGIGIHHSGILPILKEIVEMLFARGLVKI 613

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETFAMG+NMPA+TV+F + KK+DG + R +   EY QM+GRAGRRG D  G  II+
Sbjct: 614  LFATETFAMGVNMPARTVIFDSTKKFDGQTSRMLQPAEYTQMAGRAGRRGLDKNGTVIII 673

Query: 482  VDEQMEMNT-LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
                +   + L++M+LGKP  L S FRL+Y  IL L+ R E   T E+++ +SF +F   
Sbjct: 674  CKMGVAGESELQNMILGKPMRLESQFRLTYAMILYLL-RVE-LVTVENMMLHSFREFGKR 731

Query: 541  KALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
              LP+   +++K+EE+ + L+   E    + ++++   +      +LM ++   ++V   
Sbjct: 732  LKLPESTSELNKMEEKMSKLNDLSEHLKPLCQFYEAAAEYLGKWDELMPKLFLSQKVSNE 791

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVV-----------------KKPSAGVGT--------- 632
            +  GR++ V          ++++VV                 K PS+  G          
Sbjct: 792  MKPGRVLVVTHAQHHNKLAILLSVVQQDQNTARYKVLVLDHQKAPSSSTGDADKDNPVME 851

Query: 633  ------------------LPSRGGGYIVPVQLPLISTLSKIRLSVPPD----LRPLDARQ 670
                              +P   GG+ V +Q+ +   +   +  +  D    L+  D RQ
Sbjct: 852  RGKLWHRMLALSAQHRHFVPEGVGGHCV-LQITVDDVMDVTKQVIKCDPVKILQNWDNRQ 910

Query: 671  SILLAVQELESRFPQGLPKLNPVKDMKIEDPEV-VDLVNQIEELEHKLFAHPLNK---SQ 726
                       RF +  P    V D      E+ +D+VN+  +LE   F   +N+   S+
Sbjct: 911  I---------PRF-KDQPPSQSVLDATAALSELNMDIVNEKTKLESLKFQFNINQVKLSE 960

Query: 727  DENQIR-------CFQRKAEVNHEI------QQLKSKMRDSQIQ------KFRDELKNRS 767
            D  + +        +   A+  HE       +QL++K+ D + Q          +  N+ 
Sbjct: 961  DLKRAKEVLDRFLPYTDIADFGHEFAFVYDRKQLETKLEDLKYQVSYKSMSLYPDYCNKL 1020

Query: 768  RVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
            +VL++L +ID    V +KGR AC +   +EL++TEL+      DL   ++AAL S  +  
Sbjct: 1021 KVLQELKYIDDMQQVAMKGRVACEMGQ-NELMITELVLRNILTDLQPAEIAALLSSLVFQ 1079

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCW 886
             K+  +  +   L K     +E  R I  ++        V + +E     F L++V+Y W
Sbjct: 1080 SKTEVEPKMIETLKKARALFEEVERDIRSVEQ----MYGVTDLLERDKLNFGLVEVVYEW 1135

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            ++   F+E++ +TDI EG I+R  ++L+E L  ++ AA+ +G+  L  K   AS +++R 
Sbjct: 1136 AQNKPFSEIMDLTDIKEGIIVRCIQQLNETLCNVKDAARIIGDPVLHSKMEEASNAIKRD 1195

Query: 947  IMFSNSLY 954
            I+F+ SLY
Sbjct: 1196 IVFAASLY 1203


>gi|195109725|ref|XP_001999432.1| GI24507 [Drosophila mojavensis]
 gi|193916026|gb|EDW14893.1| GI24507 [Drosophila mojavensis]
          Length = 1194

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 320/951 (33%), Positives = 515/951 (54%), Gaps = 80/951 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE  + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 255  AMEFPFELDVFQKQAILKLEERQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 314

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIFD
Sbjct: 315  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDITRDLEYVIFD 374

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 375  EVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTKKRKVYVISTLKR 434

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL HY++   G      ++L+VD + +F + N+ K  +   K+++  + + G     +
Sbjct: 435  PVPLMHYLYTGAGGKSRDDIFLLVDAQGRFLQGNYEKAVER--KKEMQSKSKTGGPKNYV 492

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
               GS         ++  +      PV+ F+ SR  C+ +  ++  +D NT  EK +V++
Sbjct: 493  ---GSKQDQCTWIGLIDFLKRNNKMPVVAFTLSRNRCDTNVAALQSVDLNTAVEKGSVQK 549

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P +  +   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 550  FFLQCLAKLKPPDRTIPQVLALKDSLERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 609

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
            ETFAMG+NMPA+TV+F + KK+DG   R +  GEYIQM+GRAGRRG D+ G  I++   Q
Sbjct: 610  ETFAMGVNMPARTVIFDSHKKFDGTEMRNLKPGEYIQMAGRAGRRGHDENGTVILLCKGQ 669

Query: 486  MEMNT-LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            +  +  L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  +  LP
Sbjct: 670  VPPSMELRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMQFSFKEFNQKLQLP 727

Query: 545  DIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
               K++   E + A+L   GE    +  ++   ++  + + ++M  I    ++   +  G
Sbjct: 728  TQQKQLQLAEAKFANLPNLGEHLQPLIYFYDKSVEYWKEKHRIMKFILTQPKIQKEMKVG 787

Query: 603  RLIKVREG----------------GTDWGWGVVV-----------NVVK----------K 625
            R+I + +G                G D  + V+V           NV +           
Sbjct: 788  RIIVITQGKHYNKLAILLNVKSVLGKDTVYKVLVLDHQFKNNDYDNVNRGELYYKILSLT 847

Query: 626  PSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ-----------SI 672
            P          GG  ++ ++   I T++K  + V  D  +R  + RQ           ++
Sbjct: 848  PQHKFFHPEGIGGHAVLDIRAVDILTITKSTIKVDADVIIRNWEQRQLERFKDSPPSATV 907

Query: 673  LLAVQELE------SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK---LFAHPLN 723
            + AV EL       +  P  +  +N  K++ +     V ++N ++ L  +   +  H   
Sbjct: 908  VKAVTELHQLNEAYNANPDSIKYINMSKEINVNAETEVAMLNYVDHLARQVGNVLPHTNI 967

Query: 724  KSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
               ++   + ++R+  +   I++L+ K     +  + D   N+ +VL+ L +ID    V 
Sbjct: 968  AGFEQEFAKVYERRM-LEISIEELRFKNSAKNLTLYPDYC-NKLQVLRALNYIDDQNEVT 1025

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K   +  +   L K 
Sbjct: 1026 LKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKIQGEPVIPEPLKKC 1084

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            +   ++    I   +  C+  V      E+ +   L++V+Y W+K   FAE++++T++ E
Sbjct: 1085 VAAFEQINDTILAEEQRCQAAVE----AENNLNFGLLEVVYEWAKNKPFAEIMKLTEVQE 1140

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G I+R  ++LDE L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1141 GIIVRCIQQLDETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1191


>gi|195145412|ref|XP_002013687.1| GL24270 [Drosophila persimilis]
 gi|194102630|gb|EDW24673.1| GL24270 [Drosophila persimilis]
          Length = 1197

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 322/957 (33%), Positives = 524/957 (54%), Gaps = 88/957 (9%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 254  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 313

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIFD
Sbjct: 314  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDITRDLEYVIFD 373

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 374  EVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTKKRKVYVISTLKR 433

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK-ASGR 304
            P PLQH+++   G      ++L+VD   ++ + N+ K  +   K+++ G+ ++G  ASG 
Sbjct: 434  PVPLQHFLYTGAGGKSRDDIFLLVDANGRYLQGNYEKAVER--KKEMQGKSKSGAGASGS 491

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                 +         ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V+
Sbjct: 492  KNYVNAKQEQYTWIGLIDFLKRNNKMPVVAFTLSRNRCDTNVAALQSVDLNTEKEKGAVQ 551

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            + F   +  L   DR++P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFA
Sbjct: 552  KFFLQCLAKLKPPDRSIPQVMVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFA 611

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM--- 481
            TETF+MG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  I++   
Sbjct: 612  TETFSMGVNMPARTVVFDSHKKFDGLEVRNLKPGEYIQMAGRAGRRGHDETGTVIVLCKG 671

Query: 482  -VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
             V   ME   L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  +
Sbjct: 672  NVPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMQFSFKEFNQK 726

Query: 541  KALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
              LP   K++   E++ A L   GE    +  ++   +   + + ++M  I    ++   
Sbjct: 727  LQLPTQQKQLRIAEDKFAMLPTLGEHLQPLVHFYDKSIHYWKEKHRVMKFIVTQAKIQKE 786

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------------------------- 633
            L  GR+I + +G      G+++N+  K   G  T+                         
Sbjct: 787  LKVGRVIVITQGKHYNKLGILLNI--KSVLGKDTMYKVLVLDHQFKAKENELVNRGEFYY 844

Query: 634  ------PSR--------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ------- 670
                  P          GG  ++ ++   I +++K    V  D  +R  + RQ       
Sbjct: 845  KILSLTPKNKFFQPEGIGGHAVLDIKAIDIVSITKSTFKVDADVVIRNWEQRQLERFKDT 904

Query: 671  ----SILLAVQELESRFPQGLPKLNPV------KDMKIEDPEVVDLVNQIEELEHK---L 717
                +++ AV +L       +  ++ +      K++ +     VDL+  +E+L  +   L
Sbjct: 905  PPGATVVKAVSDLHQLNENYIANVDSIKFINLAKEINVNADTEVDLLQSVEQLGRQVADL 964

Query: 718  FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
              H      ++   + ++R+    H I++L+ K     +  + D   N+ +VL  L +ID
Sbjct: 965  LPHTNIAGFEQEFAKVYERRMLELH-IEELRFKNSAKNLSLYPDYC-NKLKVLHALNYID 1022

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
                V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K   +  + 
Sbjct: 1023 EQNEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKIQGEPVIP 1081

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
              L + +   ++ + KI  +  E + + + +   ES +   L++V+Y W++   FAE+++
Sbjct: 1082 EALKECVAAFEQISDKI--LAEEQRFQASTES--ESRLNFGLLEVVYEWARNKPFAEIMK 1137

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +T++ EG I+R  ++LDE L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1138 LTEVQEGIIVRCIQQLDETLRDVKTAAIRIGNPGLQAKMEEASAAIKRDIVFTASLY 1194


>gi|125774775|ref|XP_001358639.1| GA10159 [Drosophila pseudoobscura pseudoobscura]
 gi|54638378|gb|EAL27780.1| GA10159 [Drosophila pseudoobscura pseudoobscura]
          Length = 1197

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 322/957 (33%), Positives = 525/957 (54%), Gaps = 88/957 (9%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 254  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 313

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIFD
Sbjct: 314  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDITRDLEYVIFD 373

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 374  EVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTKKRKVYVISTLKR 433

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK-ASGR 304
            P PLQH+++   G      ++L+VD   ++ + N+ K  +   K+++ G+ ++G  ASG 
Sbjct: 434  PVPLQHFLYTGAGGKSRDDIFLLVDANGRYLQGNYEKAVER--KKEMQGKSKSGAGASGS 491

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                 +         ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V+
Sbjct: 492  KNYVNAKQEQYTWIGLIDFLKRNNKMPVVAFTLSRNRCDTNVAALQSVDLNTEKEKGAVQ 551

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            + F   +  L   DR++P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFA
Sbjct: 552  KFFLQCLAKLKPPDRSIPQVMVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFA 611

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM--- 481
            TETF+MG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  I++   
Sbjct: 612  TETFSMGVNMPARTVVFDSHKKFDGLEVRNLKPGEYIQMAGRAGRRGHDETGTVIVLCKG 671

Query: 482  -VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
             V   ME   L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  +
Sbjct: 672  NVPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMQFSFKEFNQK 726

Query: 541  KALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
              LP   K++   E++ A L   GE    + +++   +   + + ++M  I    ++   
Sbjct: 727  LQLPTQQKQLRIAEDKFAMLPTLGEHLQPLVQFYDKSIHYWKEKHRVMKFIVTQAKIQKE 786

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------------------------- 633
            L  GR+I + +G      G+++N+  K   G  T+                         
Sbjct: 787  LKVGRVIVITQGKHYNKLGILLNI--KSVLGKDTMYKVLVLDHQFKAKENELVNRGEFYY 844

Query: 634  ------PSR--------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ------- 670
                  P          GG  ++ ++   I +++K    V  D  +R  + RQ       
Sbjct: 845  KILSLTPKNKFFQPEGIGGHTVLDIKAIDIVSITKSTFKVDADVVIRNWEQRQLERFKDT 904

Query: 671  ----SILLAVQELESRFPQGLPKLNPV------KDMKIEDPEVVDLVNQIEELEHK---L 717
                +++ AV +L       +  ++ +      K++ +     VDL+  +E+L  +   L
Sbjct: 905  PPGATVVKAVSDLHQLNENYIANVDSIKFINLAKEINVNADTEVDLLQSVEQLGRQVADL 964

Query: 718  FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
              H      ++   + ++R+    H I++L+ K     +  + D   N+ +VL  L +ID
Sbjct: 965  LPHTNIAGFEQEFAKVYERRMLELH-IEELRFKNSAKNLSLYPDYC-NKLKVLHALNYID 1022

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
                V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K   +  + 
Sbjct: 1023 ELNEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKIQGEPVIP 1081

Query: 838  MELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
              L + +   ++ + KI  +  E + + + +   ES +   L++V+Y W++   FAE+++
Sbjct: 1082 EALKECVAAFEQISDKI--LAEEQRFQASTES--ESRLNFGLLEVVYEWARNKPFAEIMK 1137

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +T++ EG I+R  ++LDE L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1138 LTEVQEGIIVRCIQQLDETLRDVKTAAIRIGNPGLQAKMEEASAAIKRDIVFTASLY 1194


>gi|344240841|gb|EGV96944.1| Superkiller viralicidic activity 2-like 2 [Cricetulus griseus]
          Length = 851

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 266/634 (41%), Positives = 388/634 (61%), Gaps = 73/634 (11%)

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
           ++ EEK  VE+VF NA+DCL++ED+ LP                                
Sbjct: 258 DSDEEKKMVEEVFSNAIDCLSDEDKKLP-------------------------------- 285

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
                +ALFATETFAMG+NMPA+TV+FT  +K+DG   R+I SGEYIQMSGRAGRRG DD
Sbjct: 286 -----QALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDD 340

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
           RGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+ R E +   E++++ SF
Sbjct: 341 RGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL-RVE-EINPEYMLEKSF 398

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPER 594
           +QFQ+ +A+P + +KV   EE+   +    E  V  Y+K++  +A+L K++   I +P+ 
Sbjct: 399 YQFQHYRAIPGVVEKVKNSEEQYNKIVIPNEENVVIYYKIRQQLAKLGKEIEEYIHKPKY 458

Query: 595 VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP---------------------------- 626
            L +L  GRL+KV+  G D+GWGVVVN  KK                             
Sbjct: 459 CLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPLYVVEVLLRCSKESLKN 518

Query: 627 SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
           SA     P+    +G   +VPV + L+S +S +RL +P DLRP+D RQS+L ++QE++ R
Sbjct: 519 SATEAAKPAKPDEKGEMQVVPVLVHLLSAISTVRLYIPKDLRPVDNRQSVLKSIQEVQKR 578

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEVN 741
           FP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N    E      ++KA++ 
Sbjct: 579 FPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDPNLETVYTLCEKKAQIA 638

Query: 742 HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            +I+  K +++ ++     DELK R RVL++LG   +  V+++KGR AC I + DELL+T
Sbjct: 639 IDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMKGRVACEISSADELLLT 698

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           E+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL+Q+QE A++IA++  E 
Sbjct: 699 EMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLRQMQECAKRIAKVSAEA 758

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           KLE++ + Y+ S+ +P LMDV+Y W+ GATFA + +MTD+FEGSIIR  RRL+E L Q+ 
Sbjct: 759 KLEIDEETYL-SSFKPHLMDVVYTWATGATFAHICKMTDVFEGSIIRCMRRLEELLRQMC 817

Query: 922 AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+A+G   LE KFA     ++R I+F+ SLYL
Sbjct: 818 QAAKAIGNTELENKFAEGITKIKRDIVFAASLYL 851



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 106/163 (65%), Positives = 128/163 (78%), Gaps = 13/163 (7%)

Query: 38  CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 109 CTHEVALPADEEYIPLKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 157

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 158 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 217

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
           +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D +
Sbjct: 218 NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSD 260


>gi|195392329|ref|XP_002054810.1| GJ24644 [Drosophila virilis]
 gi|194152896|gb|EDW68330.1| GJ24644 [Drosophila virilis]
          Length = 1192

 Score =  501 bits (1289), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 325/954 (34%), Positives = 513/954 (53%), Gaps = 86/954 (9%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 253  AMEFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 312

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIFD
Sbjct: 313  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDITRDLEYVIFD 372

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 373  EVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTKKRKVYVISTLKR 432

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL HY++   G      ++L+VD + +F + N+ K  +   K+++  +    KA G  
Sbjct: 433  PVPLMHYLYTGAGGKSRDDIFLLVDAQGKFLQGNYEKAVER--KKEMQSK---SKAGGPK 487

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                S         ++  +      PV+ F+ SR  C+ +  S+  +D NT  EK  V++
Sbjct: 488  NYVSSKQDQCTWIGLIDFLKRNNKMPVVAFTLSRNRCDANVASLQSVDLNTAVEKGAVQK 547

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P +  +   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 548  FFLQCLAKLKPPDRTIPQVLALKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 607

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TV+F +  K+DG   R +  GEYIQM+GRAGRRG D+ G  I+M    
Sbjct: 608  ETFAMGVNMPARTVIFDSHMKFDGMEMRNLKPGEYIQMAGRAGRRGHDENGTVILMCKAS 667

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  + 
Sbjct: 668  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMQFSFKEFNQKL 722

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K +   E++ A L   GE    +  ++   ++  + + ++M  I    ++   L
Sbjct: 723  QLPTQQKLLQLAEDKFAMLPTLGEHLQPLIYFYDKSVEYWKEKHRIMKFIVTQPKIQKEL 782

Query: 600  GSGRLIKVREG----------------GTDWGWGVVV-----------NVVK-------- 624
              GR+I + +G                G D  + V+V           NV +        
Sbjct: 783  KVGRVIVITQGKHYNKLAILLNVKSVLGKDTVYKVLVLDHQFKSNDSDNVNRGELYYKIL 842

Query: 625  --KPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
               P          GG  ++ ++   I T++K  + V  D  +R  + RQ          
Sbjct: 843  SLTPQHKFFHPEGIGGHTVLDIRAIDILTITKSTIKVDADVIIRNWEQRQLERFKDAPPG 902

Query: 671  -SILLAVQELE------SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK---LFAH 720
             +++ AV EL       +  P+ +  +N  K++ +     V ++N ++ L  +   +  H
Sbjct: 903  ATVVKAVTELHQLNEAYNANPESIKYVNMSKEINVNADSEVAMLNYVDHLARQVGDVLPH 962

Query: 721  PLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
                  ++   + ++R+    H I++L+ K     +  + D   N+ +VL+ L +ID   
Sbjct: 963  TNIAGFEQEFAKVYERRVLEIH-IEELRFKNSAKNLTLYPDYC-NKLQVLRALNYIDELN 1020

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
             V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K   +  +   L
Sbjct: 1021 EVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKIQGEPVIPEPL 1079

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
             K +   ++    I   +  C+  +      E+ +   L++V+Y W+K   FAE++++T+
Sbjct: 1080 KKCVAAFEQINDTILAEEQRCQAAIE----AENNLNFGLLEVVYEWAKNKPFAEIMKLTE 1135

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + EG I+R  ++LDE L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1136 VQEGIIVRCIQQLDETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1189


>gi|195503022|ref|XP_002098478.1| GE23923 [Drosophila yakuba]
 gi|194184579|gb|EDW98190.1| GE23923 [Drosophila yakuba]
          Length = 1197

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 328/962 (34%), Positives = 521/962 (54%), Gaps = 100/962 (10%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 256  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 315

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GSEV +++ WVIFD
Sbjct: 316  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSEVTRDLEWVIFD 375

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 376  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKR 435

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + ++ + N+ K  +   K+++ G+ + G  +G  
Sbjct: 436  PVPLTHFLYTGAGGKSRDDMFLLVDAQGKYLQGNYEKAVER--KKEMQGKAKGG-PTGSK 492

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                +         ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V++
Sbjct: 493  NHINAKQEQYTWIGLIDFLKRNNKMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQK 552

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 553  FFLQCLAKLKPPDRTIPQVLILKDALQRGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 612

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  IIM    
Sbjct: 613  ETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  + 
Sbjct: 673  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMQFSFKEFNQKL 727

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E++ A L   GE    +  ++   ++  + + ++M  I    ++   L
Sbjct: 728  QLPTQQKQLRLAEDKFAMLPNLGEHLQPLVNFYDKAVEYWKEKHRIMKFIVTQAKIQKEL 787

Query: 600  GSGRLIKVREG----------------GTDWGWGVVV----------NVVKKPSA--GVG 631
              GR+I + +G                G D  + V+V          N +++      + 
Sbjct: 788  KVGRVIVITQGKHYNKLAILLNTKSVTGKDTIYKVLVLDHQFKAKDSNSLQQSELYYKIL 847

Query: 632  TLPSR---------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
            +L  R         GG  ++ ++   I  ++K  L V  D  +R  + RQ          
Sbjct: 848  SLTPRNMTFQPEGIGGHTVLDIKAIDIINITKSTLKVDADAIIRNWEQRQLERFKDSPPG 907

Query: 671  -SILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVD------LVNQIEELEHK---LFAH 720
             S++ AV EL       +   + +K + +    VV       ++N ++ L  +   L  H
Sbjct: 908  GSVVKAVTELNQLNESYIASADNIKYVNLSKEIVVSADSELAMLNYVDHLRRQVGELLPH 967

Query: 721  PLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
                  ++   + ++R+    H I++L+ K     +  + D   N+ +VL+ L +ID   
Sbjct: 968  TNIAGFEQEFAKVYERRMLEIH-IEELRFKNSAKNLTLYPDYC-NKLQVLRALKYIDELD 1025

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
             V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K  ++  +   +
Sbjct: 1026 EVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKLRDKPVIPEAM 1084

Query: 841  AKPLQQ--------LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATF 892
             K ++         L E  R  A I+++ +L               L++V+Y W++   F
Sbjct: 1085 KKCVEAFEQINDTILAEEQRYQAAIESDNRLNFG------------LLEVVYEWARNKPF 1132

Query: 893  AEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNS 952
            AE++++T + EG I+R  ++L+E L  ++ AA  +G   L+ K   AS +++R I+F+ S
Sbjct: 1133 AEIMKLTTVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTAS 1192

Query: 953  LY 954
            LY
Sbjct: 1193 LY 1194


>gi|299756424|ref|XP_002912202.1| translation repressor [Coprinopsis cinerea okayama7#130]
 gi|298411671|gb|EFI28708.1| translation repressor [Coprinopsis cinerea okayama7#130]
          Length = 1248

 Score =  499 bits (1286), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 338/999 (33%), Positives = 526/999 (52%), Gaps = 125/999 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  Y FELD FQ+ +V  LE+  SV V+AHTSAGKT VAEYAIA++ +   R IYTSP
Sbjct: 264  DMAHKYPFELDTFQKHAVYHLEKGNSVFVAAHTSAGKTVVAEYAIALSEKHMTRAIYTSP 323

Query: 128  LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+  Q F    VG++TGDV ++P ASCL+MTTEILR MLY+G++++++V +
Sbjct: 324  IKALSNQKFRDFKQTFSAATVGILTGDVQINPEASCLIMTTEILRSMLYKGADLIRDVEF 383

Query: 186  VIFDEIHYMKDRE-----------------RGVVWEESIIFLPPAIKMVFLSATMSNATQ 228
            VIFDE+HY+ D E                 RGVVWEE II LP  + ++ LSAT+ NA +
Sbjct: 384  VIFDEVHYVNDAEVRYYVHFRSELILTKPQRGVVWEEVIIMLPEHVNIILLSATVPNAKE 443

Query: 229  FAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL 288
            FA+W+    K+  +V+ T  RP PL+HY++   G  ++ +VD K  F    +    ++  
Sbjct: 444  FADWVGRTKKKDIYVISTPQRPVPLEHYLY--AGRDMFKIVDAKRNFLSQGYKDAGESLK 501

Query: 289  K--------------QKIGGRRENGKA-----------------SGRMAKGGSGSGGSDI 317
            +              Q++G +     A                 + RM    +G+  +  
Sbjct: 502  RKQDKERQAAGLPPVQRVGAKAATSNAQRGRGGPPRGRGGSVSSAPRMMH--TGADKNLY 559

Query: 318  FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
              +V  + +++  PV+VF+ S++ CE++A +++  D  T  EK  V    + A+  L   
Sbjct: 560  VHLVGHLKKKQLLPVVVFTLSKKRCEENASTLTNQDLCTGVEKSEVHVAIEKALSRLKGS 619

Query: 378  DRNLPAIELMLPLLKRGIAVHH-------SGLLPVIKELVELLFQEGLVKALFATETFAM 430
            D+ LP I  M  LL RGI +HH          L  I +LVE+LF  GLVK LFATETFAM
Sbjct: 620  DKKLPQITRMRDLLSRGIGIHHVFPRSIHRRFLKAILKLVEILFARGLVKILFATETFAM 679

Query: 431  GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMN 489
            G+NMPAK VVF++++K DG S R I  GEY QM+GRAGRRG D  G  II+  + + E  
Sbjct: 680  GVNMPAKCVVFSSMRKHDGKSFRDILPGEYTQMAGRAGRRGLDPTGTVIIVCGDNLPEQT 739

Query: 490  TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
             L+ M++G P  L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP   K+
Sbjct: 740  ALQTMIIGTPGKLSSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQRLLPTHEKQ 797

Query: 550  VSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKK-LMSEITRPERVLYYLGSGRL 604
            + + E + ASL          ++ EY+    D+ +  +  L+  +++P+     L SGR+
Sbjct: 798  IIEGERKLASLPPLQCDVCTTDIDEYYDYCFDVVKKNQTLLLLGMSKPQGA-KLLTSGRV 856

Query: 605  IKVREGGTDWG-WGVVVNVVKKPSAGVGTLPSRGGGYIVPV---------------QLPL 648
            + VR+G    G   +++     P++  G L +    +++ +                LP 
Sbjct: 857  VVVRDGHFASGALAILLKAAPVPASSAGLLDNVKSYFVLALVDPETKAGRKDVDHQSLPP 916

Query: 649  ISTLSKIRLSVPP---DLRPLDARQSILL--------------------------AVQEL 679
               ++ I L V     DLR +     +L+                          A++EL
Sbjct: 917  TWPINPIDLDVSDGVYDLRAVPVTSIVLVTDRTVKVDTTAIVDTHLIAKMRDGIAALKEL 976

Query: 680  ESRF-PQG-LPKLNPVKDMKIEDPEVVDLVN-QIEELEHKLFAHPLNKSQDENQIRCFQR 736
               + P G +P+++  +    E  E ++L N   + LE   F   L     ++     +R
Sbjct: 977  LKEWVPSGVVPEVDWSRLRAFEFQETLNLRNSSAKRLE--TFGCRLCGDFAQHFALTHER 1034

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            KA V  E+ +L+  M +  ++   D  + R  VLK L  ID +  V LKGR AC I++  
Sbjct: 1035 KAIVA-ELAKLRMFMSEQNLELIPD-YEQRIAVLKDLRFIDENSTVLLKGRVACEINSAS 1092

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            EL++TEL+   T  + +  +V AL SCF+  +K+  +  +  +L      +   + ++  
Sbjct: 1093 ELVLTELILENTLANYEPEEVVALLSCFVFQEKTDIEPVIPPKLEAGRDAIMAISDRVER 1152

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            +Q   K+ V   E   S+++  L++V+Y W+KG  F ++  +TD+ EG+I+R   RLDE 
Sbjct: 1153 VQTLHKVAV---EDFRSSLKFGLVEVVYEWAKGMPFEQITALTDVPEGTIVRVITRLDET 1209

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              ++R AA+ +G+  L KK   A   ++R I+F+ SLY 
Sbjct: 1210 CREVRDAARVIGDAELFKKMEDAQIKIKRDIVFAASLYF 1248


>gi|410320|gb|AAA35049.1| antiviral protein [Saccharomyces cerevisiae]
          Length = 1286

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 329/999 (32%), Positives = 519/999 (51%), Gaps = 148/999 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A++  FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323  ARSCPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130  ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383  ALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443  FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--------------- 292
             RP PL+  ++      L  V+++  +F E NF K ++    +                 
Sbjct: 503  KRPVPLEINIW--AKKELIPVINQNSEFLEANFRKHKEILNGESAKGAPSKTDNGRGGST 560

Query: 293  --GGRRENGKASGRMAKGGSGSGGSD----------------IF-----------KIVKM 323
              GGR  +    GR  +G S  GG++                 F           +IV  
Sbjct: 561  ARGGRGGSNTRDGRGGRGNSTRGGANRGGSRGAGAIGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324  IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
            + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621  LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384  IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
            I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681  ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444  VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            ++K DG+  R +  GE+  ++GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741  IRKHDGNGLRELTPGEFT-LAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRL 799

Query: 503  VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA 562
             S FRL+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+EE  +++ 
Sbjct: 800  QSQFRLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPEHEKQIKVLQEELQTIEY 857

Query: 563  SG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGV 618
                  + ++ ++ +L L   +    LM E+ +   +L+ L  GRL+  R+       G 
Sbjct: 858  KSCEICDNDIEKFLELMLAYKEATVNLMQEMVKSPSILHILKEGRLVAFRDPNDCLKLGF 917

Query: 619  VVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE 678
            V  V  K +  V         +  P +LP                   +   + L+   +
Sbjct: 918  VFKVSLKDAVCVIMT------FTKPYKLP-------------------NGEPNHLIYFPK 952

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-------------S 725
             +    +  PK         E P     V  IE +  + FA PL K             +
Sbjct: 953  ADGYRRRNFPKFQKTDFYMEEVP-----VTAIEVITKRKFAAPLGKVIKKDVAALNEFNA 1007

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL-----------------KNRSR 768
            +  N +     K  +N E Q LK           RDE+                 K ++ 
Sbjct: 1008 ETNNILDGKTLKEAINIEKQGLKIHQILLDRTNIRDEIFKLKSIKCPNLSQHIVPKFKAH 1067

Query: 769  VLKK----LGHIDADGVVQL-------------------------KGRAACLIDTGDELL 799
            V+KK    L H+ +D  + L                         KGR AC I++G EL+
Sbjct: 1068 VIKKKIEELYHLMSDQNLSLLPDYEKRLAVLKDTEFIDQNHNVLLKGRVACEINSGYELV 1127

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARKIAEI 857
            +TEL+ +      +  ++ AL S F+   K+ E+    +   LAK  Q+++E  +K+  +
Sbjct: 1128 LTELILDNFLGSFEPEEIVALLSVFVYEGKTREEEPPIVTPRLAKGKQRIEEIYKKMLCV 1187

Query: 858  QNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             N  ++ +  DE      + F +M+V+Y W++G +F E+++M+   EG+++R    LDE 
Sbjct: 1188 FNTHQIPLTQDEAEFLDRKRFAMMNVVYEWARGLSFKEIMEMSPEAEGTVVRVITWLDEI 1247

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ A+  +G   L  K + A E ++R I+F+ SLYL
Sbjct: 1248 CREVKTASIIIGNSTLHMKMSRAQELIKRDIVFAASLYL 1286


>gi|119623959|gb|EAX03554.1| superkiller viralicidic activity 2-like (S. cerevisiae), isoform
            CRA_a [Homo sapiens]
          Length = 1183

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 326/896 (36%), Positives = 481/896 (53%), Gaps = 102/896 (11%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307  WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133  NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
            NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367  NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193  YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
            Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427  YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253  LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487  LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308  GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
            GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545  GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368  QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
            Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605  QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428  FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
            FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665  FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487  EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
            EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725  EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540  EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783  EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL-----------PSRGGGYIVPVQLP 647
            L +GR++ V+        GV++ V    ++ V T            P   G     V  P
Sbjct: 839  LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFTTLVLCDKPLSQDPQDRGPATAEVPYP 898

Query: 648  LISTLSKIRLSVPP--------DLRPLD--ARQSILLAVQE---LESRFPQGLPKLNPVK 694
                L   +L +P          L+P D  A  + +L V     LE    +  PK     
Sbjct: 899  --DDLVGFKLFLPEGPCDHTVVKLQPGDMAAITTKVLRVNGEKILEDFSKRQQPKFK--- 953

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHP-----------------------LNKSQDENQI 731
                +DP +  +   ++EL     AHP                       L   + E  I
Sbjct: 954  ----KDPPLAAVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELI 1009

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLKKLGHI 776
            +  Q         Q LK + R  QIQK  + L+                R  VL+ LG++
Sbjct: 1010 QGAQCVHSPRFPAQYLKLRER-MQIQKEMERLRFLLSDQSLLLLPEYHQRVEVLRTLGYV 1068

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQ 833
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   + 
Sbjct: 1069 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQL 1127

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
             N    L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G
Sbjct: 1128 PN---TLKQGIERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARG 1179


>gi|17933658|ref|NP_524465.1| twister, isoform A [Drosophila melanogaster]
 gi|442620708|ref|NP_001262884.1| twister, isoform B [Drosophila melanogaster]
 gi|16769288|gb|AAL28863.1| LD23303p [Drosophila melanogaster]
 gi|23172083|gb|AAF56187.2| twister, isoform A [Drosophila melanogaster]
 gi|220947190|gb|ACL86138.1| CG10210-PA [synthetic construct]
 gi|220956718|gb|ACL90902.1| tst-PA [synthetic construct]
 gi|440217804|gb|AGB96264.1| twister, isoform B [Drosophila melanogaster]
          Length = 1197

 Score =  498 bits (1283), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 326/954 (34%), Positives = 520/954 (54%), Gaps = 84/954 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 256  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 315

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS+V +++ WVIFD
Sbjct: 316  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFD 375

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 376  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKR 435

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + ++ + N+ K  +   K+++ G+ + G    R 
Sbjct: 436  PVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVER--KKEMQGKAKGGGGGPRN 493

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                     + I  ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V++
Sbjct: 494  HLNAKQEQYTWI-GLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQK 552

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 553  FFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 612

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  IIM    
Sbjct: 613  ETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E ++K SF +F  + 
Sbjct: 673  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMKFSFKEFNLKL 727

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E++ A L   GE    +  ++   ++  + + ++M  +    ++   L
Sbjct: 728  QLPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKEL 787

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAG----------------------------VG 631
             +GR+I + +G       +++N    P                               + 
Sbjct: 788  KAGRVIVITQGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKIL 847

Query: 632  TLPSR---------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
            +L  R         GG  ++ ++   I +++K  L V  D  +R  + RQ          
Sbjct: 848  SLTPRNMTFQPVGIGGHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPPS 907

Query: 671  -SILLAVQEL----ESRF--PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL--FAHP 721
             S++ AV EL    ES    P  +  +N  K++ +     V ++N ++ L  K+  F   
Sbjct: 908  GSVVKAVTELNQLNESYIDNPDNIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPH 967

Query: 722  LNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
             N +  E +  + ++R+    H I++L+ K     +  + D   N+ +VL+ L +ID   
Sbjct: 968  TNIAGFEQEFAKVYERRMLEIH-IEELRFKNSARNLTLYPDYC-NKLKVLRALKYIDELD 1025

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
             V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K  ++  +   L
Sbjct: 1026 EVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEAL 1084

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
             + +   ++    I   +   +  +  D  +       L++V+Y W++   FAE++++T 
Sbjct: 1085 KECVAAFEQINDTILAEEQRFQAAIETDNRLNFG----LLEVVYEWARNKPFAEIMKLTT 1140

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + EG I+R  ++L+E L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1141 VQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194


>gi|399215847|emb|CCF72535.1| unnamed protein product [Babesia microti strain RI]
          Length = 1024

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 313/921 (33%), Positives = 498/921 (54%), Gaps = 83/921 (9%)

Query: 66   NGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYT 125
            + E+   Y F+LD FQ+ ++  + R + V V+AHTSAGKT VAEYAIAMA    ++ +YT
Sbjct: 155  DNELLIEYPFKLDDFQKKAIYHVSRGKHVFVAAHTSAGKTIVAEYAIAMALSKGRKAVYT 214

Query: 126  SPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            SP+KALSNQKYRE    F  VG++TGD+  +P ASCLVMTTE+LR +LYRG  ++ E+  
Sbjct: 215  SPIKALSNQKYREFKNIFDSVGIITGDICCNPAASCLVMTTEVLRNLLYRGDSLIGELDV 274

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D  RGVVWEE II LP  ++++ LSAT+ N  +F++WI    ++    + 
Sbjct: 275  VIFDEVHYISDLSRGVVWEEVIIMLPKVLRLLMLSATVPNYMEFSDWIGRTMQREVVAIV 334

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            T  RPTPL HY+                     NF+            G  +NG+     
Sbjct: 335  TKKRPTPLVHYL----------------HIHSKNFLLFNS-------DGFNQNGEIQKLQ 371

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN-TQEEKDTVE 364
            A             ++K + +    PVI+FSFSR +CE +A  M KLD + TQ E+  + 
Sbjct: 372  A-------------LIKSLEQNDKLPVILFSFSRAKCETYAKCMPKLDLSKTQSERSKIH 418

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
               + +++ L++ DRN+P ++ ++ LL+RG+ VHHSGLLP+IKE+VE+LF  GLVK LFA
Sbjct: 419  LFIKESLETLSDTDRNIPQLKFIISLLERGVGVHHSGLLPIIKEIVEILFSRGLVKVLFA 478

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMVD 483
            TETFAMG+NMPA++VVFT+++K DG  +R + S EY QM+GRAGRRG D  G + I  VD
Sbjct: 479  TETFAMGVNMPARSVVFTSIRKHDGLKNRILTSSEYTQMAGRAGRRGLDSVGNVFIFCVD 538

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
               ++  L  M++ K  PL S FR++Y  +L +MSR     + E ++  SF   +  +A 
Sbjct: 539  SPPDLQDLTMMLIEKSTPLKSRFRITYSMLLQVMSR--NHMSIEELMSKSF--LERNRA- 593

Query: 544  PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
                + V +LE     +   G   + +Y  L+L   ++   +   +  P+     +  GR
Sbjct: 594  ----RNVGELESIGEIICPFGAPTIEQYMDLQLKFREMLVPITKLLWNPK--FNIITPGR 647

Query: 604  LIKVREGG--TDWGWGVVVNVVKKPSAGVGTLPS----RGGGYIVP-VQLPLIST--LSK 654
            L+++      + +  GVVV         + TLPS    +G G I+  V++  I    +S 
Sbjct: 648  LLRLHSIAYVSSYCTGVVVTTNGDSLTCLITLPSEYKIKGKGVIIKMVEMEGIEAKYISG 707

Query: 655  IRLSVPPDLRPLDARQSI-----------LLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
            I  S   D    D  QS            L+A+  +       L  L   K++K    + 
Sbjct: 708  ILDSFLADGALNDTIQSFKLDGFNTDILELVALSLVSCEVSDDLVVLP--KELKNVPLDT 765

Query: 704  VDLVNQIEELEHKLFAHPLNKSQ--------DENQIRCFQRKAEVNHEIQQLKSKMRDSQ 755
             +    + E+  KL  +  +K            N+   +    +   EI+++ S +++  
Sbjct: 766  YERFITLREINRKLTGNQCHKCSMREEHFEMSLNRGNVYSVLIQCLKEIEEISSCIKEES 825

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            ++ +  E+  R  VLK++G +D++ V  +KGR A  I T DE+ +T+++F     +LD  
Sbjct: 826  LEAY-PEMMARVNVLKQMGFLDSENVPTIKGRVATYITTTDEITLTQVLFQNILKELDPP 884

Query: 816  QVAALASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
            + AA+ S FI  D+ +++  +  ++L      + E  RKI  +QN   +   ++++    
Sbjct: 885  ECAAILSAFISTDRCNDEAPIPTLKLQNARDNIFEIHRKIYILQNSLGIHTPIEDF--DL 942

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            +  F + + Y W+ G+ F E+++MT + EG+I+R+  RL+E   ++   A  + +  L  
Sbjct: 943  LCNFSLQICYQWACGSPFPEIMEMTTLQEGNIVRAIIRLEELCKKVEHVAILMQDGELAD 1002

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            K    S+++RR I+F+ SLYL
Sbjct: 1003 KMQKTSDAIRRDIVFATSLYL 1023


>gi|13446608|emb|CAC35050.1| putative helicase Ski2 [Drosophila melanogaster]
          Length = 1197

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 325/954 (34%), Positives = 520/954 (54%), Gaps = 84/954 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 256  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 315

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS+V +++ WVIFD
Sbjct: 316  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFD 375

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 376  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKR 435

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + ++ + N+ K  +   K+++ G+ + G    R 
Sbjct: 436  PVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQGNYEKAVER--KKEMQGKAKGGGGGPRN 493

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                     + I  ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V++
Sbjct: 494  HLNAKQEQYTWI-GLIDFLRRSNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQK 552

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 553  FFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 612

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  IIM    
Sbjct: 613  ETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E ++K SF +F  + 
Sbjct: 673  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMKFSFKEFNLKL 727

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E++ A L   GE    +  ++   ++  + + ++M  +    ++   L
Sbjct: 728  QLPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKFVVTQPKIQKEL 787

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAG----------------------------VG 631
             +GR+I + +G       +++N    P                               + 
Sbjct: 788  KAGRVIVITQGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKIL 847

Query: 632  TLPSR---------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
            +L  R         GG  ++ ++   I +++K  L V  D  +R  + RQ          
Sbjct: 848  SLTPRNMTFQPVGIGGHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPPS 907

Query: 671  -SILLAVQEL----ESRF--PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL--FAHP 721
             S++ AV EL    ES    P  +  +N  K++ +     V ++N ++ L  K+  F   
Sbjct: 908  GSVVKAVTELNQLNESYIDNPDNIKYVNLSKEIIVNADSEVAMLNYVDHLLRKVGEFLPH 967

Query: 722  LNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
             N +  E +  + ++R+    H I++L+ K     +  + D   N+ +VL+ L +ID   
Sbjct: 968  TNIAGFEQEFAKVYERRMLEIH-IEELRFKNSARNLTLYPDYC-NKLKVLRALKYIDELD 1025

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
             V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K  ++  +   L
Sbjct: 1026 EVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKMQDKPVIPEAL 1084

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
             + +   ++    I   +   +  +  D  +       L++V+Y W++   FAE++++T 
Sbjct: 1085 KECVAAFEQINDTILAEEQRFQAAIETDNRLNFG----LLEVVYEWARNKPFAEIMKLTT 1140

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + EG I+R  ++L+E +  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1141 VQEGIIVRCIQQLNETVRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194


>gi|357617976|gb|EHJ71092.1| hypothetical protein KGM_14675 [Danaus plexippus]
          Length = 1252

 Score =  496 bits (1278), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 342/971 (35%), Positives = 519/971 (53%), Gaps = 109/971 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA +Y FELD FQ+ ++  LE    V V+AHTSAGKT VAEYAIAM+ R+  R IYTSP
Sbjct: 298  DMAHSYPFELDSFQKQAILKLEEGHHVFVAAHTSAGKTVVAEYAIAMSRRNCTRAIYTSP 357

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKY + ++ F +VGL+TGD+ ++  ASCLVMTTEILR MLY GS+V +++ +VI
Sbjct: 358  IKALSNQKYNDFNKMFGEVGLLTGDLQINATASCLVMTTEILRSMLYCGSDVTRDLEFVI 417

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ + ERG VWEE +I LP  + +V LSAT+ N  QFA+W+    K+  +VV T 
Sbjct: 418  FDEVHYINNTERGYVWEEVLILLPAHVSIVMLSATVPNTLQFADWVGRTKKRKVYVVSTP 477

Query: 248  FRPTPLQHYVFPVGGSG------LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
             RP PL HY++   GSG       +LVVD++  F      +L+           REN   
Sbjct: 478  KRPVPLCHYLY--TGSGGKSKNERFLVVDQEGAF------QLRGYNEAAAAKKARENEYK 529

Query: 302  SGRMAKGGSGSGGSDIFKIVKMIMERKFQ-----PVIVFSFSRRECEQHAMSMSKLDFNT 356
                 KGG   G     + + +      +     PV+ F+ SR  C+Q+A ++  +D  T
Sbjct: 530  KSFGPKGGKQFGNPKAEQTMWVAFIDHLRSCDKLPVVAFTLSRNRCDQNAENLMSVDLTT 589

Query: 357  QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
             +EK  ++  F   +  L E DR LP +  +  +L+ GI VHHSG+LP++KE+VE+LFQ 
Sbjct: 590  AKEKSHIKSFFMRCLQRLKEPDRKLPQVIRLQRVLENGIGVHHSGILPLLKEIVEMLFQS 649

Query: 417  GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
            G VK LFATETFAMG+NMPA+TVVF  + K+DG   R +   EYIQM+GRAGRRG DD G
Sbjct: 650  GHVKILFATETFAMGVNMPARTVVFDDITKFDGIQSRSLAPAEYIQMAGRAGRRGLDDTG 709

Query: 477  ICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
              II+  E + +  TLK M+LG P  L S FRL+Y  IL+L+  A    + E +++ SF 
Sbjct: 710  TVIILCKEGVPDQVTLKGMMLGTPQKLSSQFRLTYAMILSLLRVA--TVSVEGMMQRSFR 767

Query: 536  QFQYEKALPDIGKKVSKLEEEAASLDASGE-----AEVAEYHKLKLDIAQLEKKLMSEIT 590
            +F ++    D  +K  +L E+  S   S       A +A ++ + +    +   +M  + 
Sbjct: 768  EF-HQICQADNNRKQLQLAEKEYSEKCSTPLPSHLAPLATFYDIAIQYIDVLNDIMPILL 826

Query: 591  RPERVLYYLGSGRLIKVREGGTDWGWGV---------------VVNVVKKPSA------- 628
               +V+     G+++ +  G      GV               V+N  ++ +A       
Sbjct: 827  NQSKVVKEFVPGKVLIISAGPFINQLGVYLNNSGPRQTPYKVLVLNTAEQDTARYNFDVD 886

Query: 629  --------------GVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDL--RPLDARQ-- 670
                           +GT  S     I+ +    I  ++K  L +  +L  R  + RQ  
Sbjct: 887  ENWYRMLGFSKLYENIGTEESTMDHTILCIAPKNIVAVTKTNLKIDANLIIRDWEQRQMP 946

Query: 671  ---------SILLAVQEL-----ESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
                     +   +VQEL      SR    GL  L+  + + I   E++  ++++ + + 
Sbjct: 947  RFKDAPVGATCGRSVQELCQLSHASRTSTAGLETLSLTQALAITTGEILQTLDKMNKYKS 1006

Query: 716  KLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRD--SQIQKFRD-----ELKNRSR 768
            +L A      +    I  F+ +  V +E +Q + K RD   ++  F +     + + R  
Sbjct: 1007 ELEAQ-----KKYTDIANFKSEFAVVYERKQAERK-RDKYKRLLSFENLALYPDYQRRLM 1060

Query: 769  VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
            VL++L +ID    V LKGR AC + T +EL+++EL+F   F D +  ++AAL SCF+   
Sbjct: 1061 VLRELNYIDDHDSVILKGRVACCMGT-NELIISELVFRNVFTDKNPAEIAALLSCFV--- 1116

Query: 829  KSSEQINLRMELAKPLQQLQESARKIAEIQN-----ECKLEVNVDEYVESTVRPFLMDVI 883
                Q   R+E A   ++LQ   + I +I +     E K  V   E     +   L+ V+
Sbjct: 1117 ---FQAKTRVEPAL-TEKLQAGVKAIEQIDDELTRIEAKYMVGQFEGQAERLNFGLVRVV 1172

Query: 884  YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
            Y W+    FAE+I +TD+ EG I+R  ++L E L  ++ AA A+G+  L+ K   AS ++
Sbjct: 1173 YEWALEKPFAEIIDLTDVQEGIIVRCIQQLHELLVDVKDAAVAIGDPKLQAKMMEASTAI 1232

Query: 944  RRGIMFSNSLY 954
            +R I+F+ SLY
Sbjct: 1233 KRDIVFAASLY 1243


>gi|195451047|ref|XP_002072745.1| GK13521 [Drosophila willistoni]
 gi|194168830|gb|EDW83731.1| GK13521 [Drosophila willistoni]
          Length = 1227

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 334/1000 (33%), Positives = 525/1000 (52%), Gaps = 147/1000 (14%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 257  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 316

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIFD
Sbjct: 317  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDITRDLEYVIFD 376

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A W+    K+  +V+ T  R
Sbjct: 377  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTMELANWVGSTKKRKVYVISTLKR 436

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG----KA 301
            P PL HY++   G      ++L+VD + ++ ++N+ K      K+++  + E G     A
Sbjct: 437  PVPLMHYLYTGAGGRSRDDIFLLVDAQGKYLQENYEKA--VARKKEMQSKSEGGGPKTHA 494

Query: 302  SGRMAKGGSG----------------------SGGSD---IFKIVKMIMERKFQPVIVFS 336
            SG+  +G  G                      SG  D      ++  +      PV+ F+
Sbjct: 495  SGKPEQGNPGDRKKEAPKAKSTPFISGPKNYVSGKQDRQIWIGLIDFLKRSNKMPVVAFT 554

Query: 337  FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
             SR  C+Q+  ++  +D NT++EK  V + FQ  +  L   DR +P + ++   L+RGI 
Sbjct: 555  LSRNRCDQNVAALQCVDLNTEQEKKGVRKFFQQCLAKLKPPDRTIPQVMVLRDALERGIG 614

Query: 397  VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            VHHSG+LP++KE+VE+LFQ GLVK LFATETFAMG+NMPA+TV+F + +K+DG   R + 
Sbjct: 615  VHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPARTVIFDSHRKFDGLEVRNLK 674

Query: 457  SGEYIQMSGRAGRRGKDDRGICIIM----VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
             GEYIQM+GRAGRRG D+ G  I++    V   ME   L+ M+LG P  L S F L Y  
Sbjct: 675  PGEYIQMAGRAGRRGHDENGTVILLCKGNVPPTME---LRPMILGLPEKLQSQFILRYAV 731

Query: 513  ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE--AEVAE 570
            IL  + R E     E ++K SF +F     LP   K++   E++ A L A GE    +  
Sbjct: 732  ILTCL-RIES-IKVEDIMKFSFKEFNQRLQLPTQQKELRLAEDKFAMLPALGEHLQPLIY 789

Query: 571  YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV 630
            ++   ++  +   + M  +    ++   L  GR++ + +G       +++N+  K   G 
Sbjct: 790  FYDKSVEYWKENHRSMKFVVTQPKIQKELKVGRVLVITQGKHYNKLAILLNI--KSVLGK 847

Query: 631  GTL-------------------------------------PSRGGGYIV-PVQLPLISTL 652
             T+                                     P   GG+ V  ++   I ++
Sbjct: 848  DTIYKVLALDHQYKAKEESLQRDDLYYKILSLTPQHKFFQPEGIGGHAVFDIKAIDIVSI 907

Query: 653  SKIRLSVPPD--LRPLDARQ-----------SILLAVQELE------SRFPQGLPKLNPV 693
            +K  + V  D  +R  + RQ           +++ AV EL       +  P  +  +N  
Sbjct: 908  TKSLIKVDADIIIRNWEQRQLERFRDAPPGATVVKAVTELHQLNEAYNANPDSIKFVNLS 967

Query: 694  KDMKIEDPEVVDLVNQIEELEHKL---FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSK 750
            K++ +     + ++N +  L+ +L     H      ++   + ++R+    H I++L+ K
Sbjct: 968  KEINVNAESEMTMLNYVNHLKKQLGEVLPHTNIAGFEQEFAKVYERRMLEIH-IEELRFK 1026

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
                 +  + +   N+ +VL+ L +ID    V LKG+ AC +   +ELL+TEL+    FN
Sbjct: 1027 NSAKNLTLYPNYC-NKLKVLRALNYIDELDEVTLKGKVACEMGQ-NELLITELILCNMFN 1084

Query: 811  DLDHHQVAALASCFI--------PVDKSS--------EQINLRMELAKPLQQLQESARKI 854
            DL+  ++AAL S  +        PV   +        EQIN  +        L E  R  
Sbjct: 1085 DLEPAEIAALLSSLVFQAKIQGEPVIPDALKACVAAFEQINDTI--------LAEEQRFE 1136

Query: 855  AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLD 914
            AEI+ E +L               L++V+Y W++   FAE++++T++ EG I+R  ++LD
Sbjct: 1137 AEIEAENRLNFG------------LLEVVYEWARNKPFAEIMKLTEVQEGIIVRCIQQLD 1184

Query: 915  EFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            E L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1185 ETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1224


>gi|195573242|ref|XP_002104604.1| GD18353 [Drosophila simulans]
 gi|194200531|gb|EDX14107.1| GD18353 [Drosophila simulans]
          Length = 1197

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 322/953 (33%), Positives = 515/953 (54%), Gaps = 82/953 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 256  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 315

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS+V +++ WVIFD
Sbjct: 316  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFD 375

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 376  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKR 435

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + ++ + N+ K  +   K+++ G+ + G    R 
Sbjct: 436  PVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQSNYEKAVER--KKEMQGKAKGGGGGPRN 493

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                     + I  ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V++
Sbjct: 494  HLNAKQEQNTWI-GLIDFLRRGNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQK 552

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 553  FFLQCLAKLKPPDRTIPQVLILKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 612

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  IIM    
Sbjct: 613  ETFAMGVNMPARTVVFDSCKKYDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E ++K SF +F  + 
Sbjct: 673  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMKFSFKEFNLKL 727

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E++ A L   GE    +  ++   ++  + + ++M  +    ++   L
Sbjct: 728  QLPTQQKQLRLAEDKFAMLPTLGEHLQPLINFYDKAVEYWKEKHRIMKFVVTQPKIQKEL 787

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAG----------------------------VG 631
             +GR+I +  G       +++N    P                               + 
Sbjct: 788  KAGRVIVITHGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQFKAKDSDSLQQGELYHKIL 847

Query: 632  TLPSR---------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
            +L  R         GG  ++ ++   I +++K  L V  D  +R  + RQ          
Sbjct: 848  SLTPRNMTFQPEGIGGHTVLDIKAIDIISITKSTLKVDADAIIRNWEQRQLERFKDSPPS 907

Query: 671  -SILLAVQEL----ESRF--PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL--FAHP 721
             S++ AV EL    ES    P  +  +N  K++ +     V ++N ++ L  ++  F   
Sbjct: 908  GSVIKAVTELNQLNESYIDNPDNIKHVNLSKEIIVNADSEVAMLNYVDHLLRQVGTFLPH 967

Query: 722  LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
             N +  E +      +  +   I++L+       +  + D   N+ +VL+ L +ID    
Sbjct: 968  TNIAGFEQEFEKVYERRMLEIHIEELRFINSARNLTLYPDYC-NKLQVLRALKYIDDLDE 1026

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K  ++  +   L 
Sbjct: 1027 VTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKLHDKPVIPEALK 1085

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +   ++    I   +   +  ++ D  +       L++V+Y W++   FAE++++T +
Sbjct: 1086 ECVAAFEQINDTILAEEQRFQATISTDNRLNFG----LLEVVYEWARNKPFAEIMKLTTV 1141

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG I+R  ++L+E L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1142 QEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194


>gi|195331409|ref|XP_002032395.1| GM23539 [Drosophila sechellia]
 gi|194121338|gb|EDW43381.1| GM23539 [Drosophila sechellia]
          Length = 1197

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 321/953 (33%), Positives = 515/953 (54%), Gaps = 82/953 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 256  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 315

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS+V +++ WVIFD
Sbjct: 316  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFD 375

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 376  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKR 435

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + ++ + N+ K  +   K+++ G+ + G    R 
Sbjct: 436  PVPLTHFLYTGAGGKSRDDIFLLVDAQGKYLQSNYEKAVER--KKEMQGKAKGGAGGPRN 493

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                     + I  ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V++
Sbjct: 494  HLNAKQEQNTWI-GLIDFLRRGNMMPVVAFTLSRNRCDSNLAALQSVDLNTEKEKGAVQK 552

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 553  FFLQCLAKLKPPDRTIPQVLILKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 612

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  IIM    
Sbjct: 613  ETFAMGVNMPARTVVFDSCKKYDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E ++K SF +F  + 
Sbjct: 673  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEDIMKFSFKEFNLKL 727

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E++ A L   GE    +  ++   ++  + + ++M  +    ++   L
Sbjct: 728  QLPTQQKQLRLAEDKFAMLPTLGEHLQPLINFYDKAVEYWKEKHRIMKFVVTQPKIQKEL 787

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAG----------------------------VG 631
             +GR+I +  G       +++N    P                               + 
Sbjct: 788  KAGRVIVITHGKHYNKLAILLNTKSVPGKDTIYKVLVLDHQLKAKDSNSLQQGELYHKIL 847

Query: 632  TLPSR---------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
            +L  R         GG  ++ ++   I +++K  + V  D  +R  + RQ          
Sbjct: 848  SLTPRNMTFQPEGIGGHTVLDIKAIDIISITKSTMKVDADAIIRNWEQRQLDRFKDSPPS 907

Query: 671  -SILLAVQEL----ESRF--PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL--FAHP 721
             S++ AV EL    ES    P  +  +N  K++ +     V ++N ++ L  ++  F   
Sbjct: 908  GSVVKAVTELNQLNESYIDNPDNIKYVNLSKEIIVNADSEVAMLNYVDHLLRQVGAFLPH 967

Query: 722  LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
             N +  E +      +  +   I++L+       +  + D   N+ +VL+ L +ID    
Sbjct: 968  TNIAGFEQEFEKVYERRMLEIHIEELRFINSARNLTLYPDYC-NKLKVLRALKYIDDLDE 1026

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELA 841
            V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K  ++  +   L 
Sbjct: 1027 VTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKLHDKPVIPEALK 1085

Query: 842  KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
            + +   ++    I   +   +  ++ D  +       L++V+Y W++   FAE++++T +
Sbjct: 1086 ECVAAFEQINDTILAEEQRFQATISTDNRLNFG----LLEVVYEWARNKPFAEIMKLTTV 1141

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             EG I+R  ++L+E L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1142 QEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194


>gi|391343562|ref|XP_003746078.1| PREDICTED: helicase SKI2W [Metaseiulus occidentalis]
          Length = 1137

 Score =  494 bits (1272), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 319/943 (33%), Positives = 508/943 (53%), Gaps = 91/943 (9%)

Query: 62   NPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
            NP Y      ++SFELD FQ+ +V  +E+ E+V VSAHTSAGKT VAEYAIA++ R   +
Sbjct: 236  NPAY------SWSFELDTFQKKAVLLMEKGENVFVSAHTSAGKTVVAEYAIALSRRHMTK 289

Query: 122  VIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
             IYTSP+K LSN+K+R+  + F +VG++TGDV ++ +A+ L+MTTEILR MLY  + ++ 
Sbjct: 290  AIYTSPIKTLSNEKFRDFRETFDEVGIVTGDVQINRDAATLIMTTEILRSMLYNKASIID 349

Query: 182  EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            ++ WVIFDE HY+ D ERGVVWEE +I LP  + +V LSAT+ NA   A+WI  + ++  
Sbjct: 350  DLEWVIFDECHYINDAERGVVWEEVLIMLPSHVNLVLLSATVPNALNLADWIGRIKQKRI 409

Query: 242  HVVYTDFRPTPLQHYVF--PVGGSG----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGR 295
            HV+ T  RP PL+HY++   +G S       L++D   QF+  N++K+            
Sbjct: 410  HVIATTKRPVPLEHYLYVGRIGASSEQKQALLILDSAGQFKSQNYLKV------------ 457

Query: 296  RENGKASGRMAKGGSGSGG---SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKL 352
                  + + +   +  G    S    +++ + ++   P I+F+ SR+ C+ +A S++ +
Sbjct: 458  -----CAAKKSTSNNWRGPDERSRYLTLLQYLQKKDACPAILFTLSRKRCDDNAASLANV 512

Query: 353  DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
            D  T  EK  + +        L+ EDR LP +E +  LLK GI VHHSG+LP++KE+VE+
Sbjct: 513  DMTTATEKSQIHRFIAQCTARLSSEDRRLPQVETLKLLLKNGIGVHHSGILPIMKEVVEM 572

Query: 413  LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
            LFQ GL+K LFATETFAMG+NMPA+TVVF  ++K+DG   R +   EYIQM+GRAGRRGK
Sbjct: 573  LFQRGLIKILFATETFAMGVNMPARTVVFDRIRKYDGCQFRDLLPAEYIQMAGRAGRRGK 632

Query: 473  DDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G  +IM+   + +  +L+ M++GKP  L S F+++   ILNL  +A  Q   E +++
Sbjct: 633  DTVGTVLIMIHSDVPDSGSLQTMMMGKPHSLQSKFKVTTAMILNL--KAGLQRRVEDLMR 690

Query: 532  NSFHQFQYEKALPDIGKKVSKLE---EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSE 588
             SF + + +  +  + K   KL    E   SL      ++         +A   + L  +
Sbjct: 691  QSFIEDENQSQVDQMVKTRDKLRTDLENIESLKCDSCVDIESCLSTLEQLAANRRALWDK 750

Query: 589  ITRPERVLYYLGSGRLIKVREGGTDWGWGV------------VVNVVKKPSAGVGTLPSR 636
            I         L +GR++  R  G     GV            VV++ +K  +      SR
Sbjct: 751  ILEFSSAPKLLPTGRVLVFRRDGEAPRLGVIASFNSKQKQISVVSLAEKAESECYWPASR 810

Query: 637  ---------------GGGYIVPVQLPLISTLSKI---RLSVPPDLRPLDARQSILLAVQE 678
                           G G I    L L +T  +I    L  P  LR  +A Q++   V+ 
Sbjct: 811  KITTSSNPKCEQLTIGAGEI----LDLSTTDVRIDVKSLGTPKGLR--EAGQNVFEMVER 864

Query: 679  LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRK 737
             +        K N  K++K    ++ + +      E ++ +H   +    E+  R  Q+ 
Sbjct: 865  WD------FTKFNISKELKGAGLDLAEQLQTSNYWEQRVLSHSCAQCPLFESHSRMAQKV 918

Query: 738  AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
              V  E+ ++ + M   +  +   E      +L++LG+++ +G ++LKGR A  + +  E
Sbjct: 919  ISVQSELDRV-NLMLSEEGMRMMPEYHKHLALLERLGYLEPNGPLKLKGRIARAM-SNHE 976

Query: 798  LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP----LQQLQESARK 853
            +L++EL+           ++AAL S F+   KS E  N   ++ +P    +Q+ +  A  
Sbjct: 977  ILLSELLVGDVLIKCKPAELAALLSVFVYQGKSDE--NEEADIPEPVEEIMQEFKALALS 1034

Query: 854  IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT-DIFEGSIIRSARR 912
            I  ++ EC  + +   Y++   R  L++V+Y W+ G TF +++Q+  +  EG+I+R  +R
Sbjct: 1035 IGAVRRECGFDEDPQTYLDQYNRG-LVNVVYNWASGMTFGQIMQIAENQQEGTIVRCIQR 1093

Query: 913  LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            LDE L  +R AA+ +G   L  K   AS  +RR I+F+ SLYL
Sbjct: 1094 LDELLGHVRDAAKVIGNPELHSKVEQASVLIRRDIVFAASLYL 1136


>gi|349603244|gb|AEP99137.1| Superkiller viralicidic activity 2-like 2-like protein, partial
           [Equus caballus]
          Length = 563

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 248/555 (44%), Positives = 364/555 (65%), Gaps = 35/555 (6%)

Query: 339 RRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVH 398
           +++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRGI +H
Sbjct: 1   KKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDEDKKLPQVEHVLPLLKRGIGIH 60

Query: 399 HSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSG 458
           H GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT  +K+DG   R+I SG
Sbjct: 61  HGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG 120

Query: 459 EYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS 518
           EYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +LNL+ 
Sbjct: 121 EYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL- 179

Query: 519 RAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDI 578
           R E +   E++++ SF+QFQ+ +A+P + +KV   E++   +    E  V  Y+K++  +
Sbjct: 180 RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKSSEQQYNKIVIPNEESVVIYYKIRQQL 238

Query: 579 AQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP------------ 626
           A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  KK             
Sbjct: 239 AKLGKEIEEYIHKPKYCLPFLQPGRLVKVKNEGDDFGWGVVVNFSKKSNVKPNSGELDPL 298

Query: 627 ----------------SAGVGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPDLRPL 666
                           SA     P+    +G   +VPV + L+S +S +RL +P DLRP+
Sbjct: 299 YVVEVLLRCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSAISSVRLYIPKDLRPM 358

Query: 667 DARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKS 725
           D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ ++E  EH++++HPL N  
Sbjct: 359 DNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIQDQGLKKVIQKVEAFEHRMYSHPLHNDP 418

Query: 726 QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
             E      ++KA++  +I+  K +++ ++     DELK R RVL++LG   +  V+++K
Sbjct: 419 NLETVYTLCEKKAQIAMDIKSAKRELKKARTVLQMDELKCRKRVLRRLGFATSSDVIEMK 478

Query: 786 GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
           GR AC I + DELL+TE+MFNG FNDL   Q  AL SCF+  + SSE   L  +LA PL+
Sbjct: 479 GRVACEISSADELLLTEMMFNGLFNDLSAEQATALLSCFVFQENSSEMPKLTEQLAGPLR 538

Query: 846 QLQESARKIAEIQNE 860
           Q+QE A+++ + Q +
Sbjct: 539 QMQECAKRLQKFQQK 553


>gi|194910220|ref|XP_001982093.1| GG12404 [Drosophila erecta]
 gi|190656731|gb|EDV53963.1| GG12404 [Drosophila erecta]
          Length = 1197

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 319/955 (33%), Positives = 508/955 (53%), Gaps = 86/955 (9%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 256  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 315

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS+V +++ WVIFD
Sbjct: 316  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDVTRDLEWVIFD 375

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 376  EVHYINNPERGHVWEEVIILLPEHVNIIMLSATVPNTLELADWVGSTKKRKVYVISTLKR 435

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + +F + N+ K  +   + +   +     ++   
Sbjct: 436  PVPLTHFLYTGTGEKSRDDIFLLVDAQGKFLQGNYEKAVERKKEMQGKAKGGGAGSNNHF 495

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
                +         ++  +      PV+ F+ SR  C+ +  ++  +D NT+ EK  V++
Sbjct: 496  ---NAKQEQYTWIGLIDFLRRNNKMPVVAFTLSRNRCDSNLAALQSVDLNTEREKGAVQK 552

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 553  FFLQCLAKLKPPDRTIPQVLVLKDALQRGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 612

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + KK+DG   R +  GEYIQM+GRAGRRG D+ G  IIM    
Sbjct: 613  ETFAMGVNMPARTVVFDSCKKFDGLEMRNLKPGEYIQMAGRAGRRGHDETGTAIIMCKGS 672

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  + 
Sbjct: 673  VPPSME---LRPMILGLPDKLQSQFILRYAVILTCL-RIES-IKVEDIMQFSFKEFNQKL 727

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E++ A L   GE    +  ++   ++  + + ++M  I    ++   L
Sbjct: 728  QLPTQQKQLRLAEDKFAMLPTLGEHLQPLVNFYDKAVEYWKEKHRIMKLIVTQAKIQKEL 787

Query: 600  GSGRLIKVREG----------------GTDWGWGVVV--------------------NVV 623
              GR+I + +G                G D  + V+V                     ++
Sbjct: 788  KVGRVIVITQGKHYNKLAILLNIKSVMGKDTIYKVLVLDHQFKAKDSNSLQQGELYYKIL 847

Query: 624  KKPSAGVGTLPSRGGGYIVPVQLPLIS----TLSKIRLSVPPDLRPLDARQ--------- 670
                  +   P   GG+ V + +  I     T S +++     +R  + RQ         
Sbjct: 848  SLTPRNMTFQPEGIGGHTV-LDIKAIDIINITKSTLKVDAAAIMRNWEQRQLERFKDSPP 906

Query: 671  --SILLAVQELES------RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK---LFA 719
              S++ AV EL             +  +N  K++ +     V ++N ++ L  +   L  
Sbjct: 907  GASVVKAVTELNQLNDSYIASADNIKYVNLSKEIIVSADSEVAMLNYVDHLNRQVVNLLP 966

Query: 720  HPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD 779
            H      ++   + ++R+    H I++L+ K     +  + D   N+ +VL+ L +ID  
Sbjct: 967  HTNIAGFEQEFAKVYERRMLEIH-IEELRFKNSAKNLTLYPDYC-NKLQVLRALKYIDEL 1024

Query: 780  GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME 839
              V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K  E+  +   
Sbjct: 1025 EEVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKMREKPVIPEA 1083

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
            + K ++  ++    I   +   +  +  D  +       L++V+Y W++   FAE++Q+T
Sbjct: 1084 MKKCVEAFEQINDTILAEEQRFQAAIETDNRLNFG----LLEVVYEWARNKPFAEIMQLT 1139

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             + EG I+R  ++L+E L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1140 TVQEGIIVRCIQQLNETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1194


>gi|269860278|ref|XP_002649861.1| helicase, predicted [Enterocytozoon bieneusi H348]
 gi|220066701|gb|EED44174.1| helicase, predicted [Enterocytozoon bieneusi H348]
          Length = 952

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/475 (52%), Positives = 327/475 (68%), Gaps = 30/475 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           AK Y FELD FQ++++A +E + S+LVSAHTS GKT VAEYAIA + ++ QRVIYTSP+K
Sbjct: 59  AKVYPFELDTFQKIAIAAIEADRSILVSAHTSCGKTVVAEYAIAKSIQNNQRVIYTSPIK 118

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+REL +EF+DVGLMTGDVTL+P A+CLVMTTEILR M+YR SE++KE+ W+IFD
Sbjct: 119 ALSNQKFRELQEEFEDVGLMTGDVTLNPEATCLVMTTEILRNMMYRESEIIKEIHWIIFD 178

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHY+KDRERGVVWEE++I     ++MVFLSAT+ NA +FAEWIC +HKQ  HVVYT+ R
Sbjct: 179 EIHYLKDRERGVVWEETLILAKNYVRMVFLSATIPNAREFAEWICTIHKQIVHVVYTEKR 238

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
             PL+HY F       YL+ ++ E+   +NF   Q    K    G++E  K  G +A   
Sbjct: 239 IIPLKHYFF---SDKQYLIKNKDEKLSMNNFNASQKLIFK----GKKETVK--GLLACLN 289

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
           S +                  P +VFSF+R +CEQ A S+ K  + T++E    + +F N
Sbjct: 290 SVN-----------------LPAVVFSFARVKCEQFAKSIIK-SYLTKDEYKLAQMIFNN 331

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           A+  L++ED+NL A+  M  L  +GI VHHSGLLP++KE+ E+LFQEGL+K LFATE+F+
Sbjct: 332 AIQSLSDEDQNLIAVTTMKELFLKGIGVHHSGLLPIVKEIGEILFQEGLIKILFATESFS 391

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
           +GLNMPAKTV+FT++KK+DG   R + SGEY QMSGRAGRRG D  GI + +  E++ + 
Sbjct: 392 IGLNMPAKTVIFTSLKKFDGHEERILTSGEYCQMSGRAGRRGLDKEGIIVSLCSEKISIG 451

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ-YEKAL 543
            +  M      PL+S FRL+Y  ILNLM   E      + +  SF+ +Q Y KAL
Sbjct: 452 EVTQMFHSACDPLISAFRLTYNMILNLMRVEESD--PRNFLSKSFYHYQTYNKAL 504



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 157/282 (55%), Gaps = 21/282 (7%)

Query: 682 RFPQGLPKL--NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQ--IRCFQRK 737
           ++  G+ K   NP  D + E    ++ ++Q+ E ++K+ +  L++  + N+  I  +Q+K
Sbjct: 684 KYYNGIDKTAPNPPCDYETEH---INYLHQLLESKYKVSSKTLHEYLNYNKYLIYLYQKK 740

Query: 738 AEVNH--EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
            E     E  QLK      QI     E K    VL+ L ++D + V+ LKG+ A  I + 
Sbjct: 741 IEDQKLAEFDQLK------QIYHMT-ECKKMINVLRDLDYLDGNTVL-LKGKMASEISSA 792

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK-PLQQL-QESARK 853
           DE+L+TE++FN TFN LD   + AL S  I  +KS E  ++ +  A   L++L   S  K
Sbjct: 793 DEILLTEMIFNSTFNSLDIKDIIALISILI-TEKSKEGDDIILSEANLKLKELFTTSINK 851

Query: 854 IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
           I ++     +E + D+Y+++    ++MD++  W  GATF E+  MT IFEGSIIR+ +RL
Sbjct: 852 IIKVMQRHGIETDHDKYIQN-YSYYMMDIVKLWMSGATFNEICSMTKIFEGSIIRNFKRL 910

Query: 914 DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           +E L QL +AA  +G   +   F      ++R I+F+NSLYL
Sbjct: 911 EELLRQLTSAATVIGNTEMINLFGQGIYLIKRDIVFANSLYL 952


>gi|313231720|emb|CBY08833.1| unnamed protein product [Oikopleura dioica]
          Length = 676

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 266/651 (40%), Positives = 400/651 (61%), Gaps = 38/651 (5%)

Query: 338 SRRECEQHAMSMSK---LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           SR +C  +AM + +   LDF T+ EK  + +V+ NA++CL++EDR LP +  +LP+LK+G
Sbjct: 31  SRTKC-SNAMEIQRQGGLDFTTEHEKKLITEVYNNAMECLSDEDRQLPQVANILPILKKG 89

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           I +HH GLLP++KE +E+LF E L+K LFATETFAMG+NMPAKTVVFT+ +K+DG   R 
Sbjct: 90  IGIHHGGLLPILKETIEILFSENLIKCLFATETFAMGVNMPAKTVVFTSHRKFDGKDFRP 149

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
           I  GEYIQMSGRAGRRG D +GI I+MVD+Q+     K+++ GK   L S F L+Y  +L
Sbjct: 150 ISGGEYIQMSGRAGRRGMDTKGIVILMVDDQITPAIAKELLQGKADALNSAFHLTYNMVL 209

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
           NL+ R E     E +++ SF+QFQ+   +P +   +  L E    +    E     Y+KL
Sbjct: 210 NLL-RVE-DINPEWLLEKSFYQFQHCNKVPGMISDLDSLSESLKEITVDDEDSATSYYKL 267

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV------------ 622
           +  I +L +++   I  P+ VL +L  GRL+KVR G  ++GWG++VN             
Sbjct: 268 RQQIERLGRQMDQIILSPKHVLPFLNPGRLVKVRHGKKNFGWGIIVNFKKQKETGPDEEP 327

Query: 623 --------------VKKPSAGVGTLPSRGGGYIVPVQLPL---ISTLSKIRLSVPPDLRP 665
                         +KK S  +    S   G +  +   L   +S+LS IRL +P  L  
Sbjct: 328 IYRVDVLVNCDKDSIKKTSTDLAQPASGSDGSMEVIGFSLKDCLSSLSCIRLMIPQKLTS 387

Query: 666 LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
            D R+     ++E++ R+P GLP L+P +DM I DP++ +++ +IE  E +LFAH L+  
Sbjct: 388 ADERRKCRDQLKEIQRRYPDGLPLLDPTEDMNIVDPKITEIIRKIEAYEKRLFAHTLHGG 447

Query: 726 QD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
           QD EN +   ++K +V   I+  K +++ ++     DELK R RVL++LG+     V++ 
Sbjct: 448 QDTENLLTQVEKKQKVLSGIKDKKKELKKAKQVIQLDELKARKRVLRRLGYATDADVIET 507

Query: 785 KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
           KGR AC + T DELL+TE++FNG FN +   Q  ++ SC I  +K      L  ELA PL
Sbjct: 508 KGRVACEVSTADELLLTEMIFNGIFNTMTVEQCTSVLSCLIFQEKGDPP-KLAEELAAPL 566

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
           + +QE A++IA++  ECKL++  +EY++  + P LMDV+  W KG TF +++++T+++EG
Sbjct: 567 RTMQECAKRIAKVSIECKLDLEEEEYIKQ-INPNLMDVVDAWCKGGTFKQIVELTEVYEG 625

Query: 905 SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           SIIR+ RRL+E L  +  AA+A+G   LE KF    E ++R I+F+ SLYL
Sbjct: 626 SIIRAMRRLEELLRDMCHAAKAIGNEELEAKFTQGIEKIKRDIVFAASLYL 676


>gi|270010333|gb|EFA06781.1| hypothetical protein TcasGA2_TC009717, partial [Tribolium castaneum]
          Length = 1500

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 313/928 (33%), Positives = 507/928 (54%), Gaps = 103/928 (11%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA  + FELD FQ++++  LE++  V V+AHTSAGKT VAEYAIA++ +   R IYTSP
Sbjct: 252  EMAYEFPFELDTFQKLAILQLEQHNHVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSP 311

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQKYR+  +EFKDVGL+TGD  ++  ASCL+MTTEILR MLY GS++ +++ +VI
Sbjct: 312  IKALSNQKYRDFKKEFKDVGLITGDFQINQTASCLIMTTEILRSMLYCGSDITRDLEYVI 371

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ DRERG VWE+ +I LP  + +V LSAT+ N  +FA+W+   H++  +V+ T 
Sbjct: 372  FDEVHYINDRERGHVWEQVLILLPAHVCVVLLSATVPNTIEFADWLGRTHQRKVYVITTY 431

Query: 248  FRPTPLQHYVFP-VGGS---GLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
             RP PL H+++   GG+     YLV++  E ++   +     +    K+  +    +A  
Sbjct: 432  KRPVPLLHFLYTGTGGASRDNRYLVLN-SEGWKMGGYAAAVASL--PKVDPKSAYPQAKS 488

Query: 304  RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
            +               +V  +  +   P++ F+FSR +C+Q+A ++  LD  TQ+EK  +
Sbjct: 489  QYYNFTPKQEKVLWNGLVDHLNRKNLLPIVAFTFSRAKCDQNAENLMSLDLTTQKEKAQI 548

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               F+  V  L E DRN+P I  M  +L +GI VHHSG+LP+IKE+VE+LFQ+GL+K LF
Sbjct: 549  HMFFEKCVRSLKEPDRNIPQILRMRNILHKGIGVHHSGVLPIIKEIVEMLFQKGLIKLLF 608

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETFAMG+NMPA+TVVF ++ K DG   R +   EYIQM+GRAGRRG D  G  II+  
Sbjct: 609  ATETFAMGVNMPARTVVFDSITKHDGQERRNLKPAEYIQMAGRAGRRGLDSEGTVIILCK 668

Query: 484  EQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
             ++ ++  L+ M+LG P  L S FRL+Y  +L+L+ R E   + E ++  SF +  ++K 
Sbjct: 669  NKIPKVEELQAMMLGTPNVLQSQFRLTYGMVLSLL-RVES-LSVEGMMSRSFREADHQKK 726

Query: 543  LPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            + D   ++ ++E+E   L     +S    + +++       +  KK +  +    +++  
Sbjct: 727  MVDKQNELLEVEKEIRDLCTQELSSYLQPLVKFYNCASSYLEARKKCLDNVMSSPKLIKV 786

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVV--KKPSAGVGTLP---------------------- 634
            L  GR+I +          +++++V  KKP+  V  L                       
Sbjct: 787  LTPGRIILITHKSHVNKLALLLSIVRGKKPTYKVLVLTDSKPEIKEEKNDLWYKMIGLAS 846

Query: 635  -------SRGGGYIVPVQLPLISTLSKIRLSVPPDL-------------RPLDARQSILL 674
                   S  G  I+ +    I  ++   + V  DL             R     Q+   
Sbjct: 847  DNIYAPGSSPGHAILTIPTEDIFEITHKTVKVDTDLVIKDWEKRQIERFRNDPVGQTCQQ 906

Query: 675  AVQEL--------ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ 726
            A+QEL        E++  + L  L+ ++D+K+ + ++ D +  + + +  L  H      
Sbjct: 907  AIQELHKFTISVNEAKNQEKLSYLHLIQDLKVNEHQIHDDLQVVYKFKDILIDH-----L 961

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK---------------NRSRVLK 771
               QI  F+         QQ  S    + +++ RD+LK               NR  +L+
Sbjct: 962  PSTQIPNFE---------QQFASVFTRTFLERKRDDLKHYLSSASLSLYPDYENRIELLR 1012

Query: 772  KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC--FIPV-- 827
             L ++D    VQLKGR AC +   +ELL+TEL+       L   +VAAL S   F P   
Sbjct: 1013 TLKYVDLQNRVQLKGRVACEMGM-NELLITELVLRNILTKLQPAEVAALLSALVFSPKKD 1071

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
            ++  E +++  +L K ++++Q   ++IA++  E  L++  DE+ ++ +   L++++Y W+
Sbjct: 1072 NREEETVHITDDLTKAMKEMQNIHQEIAKL--EMNLDIKTDEF-QNDLNFALIEIVYEWA 1128

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDE 915
                FA+++ +TDI EG I+R  ++L++
Sbjct: 1129 SAKPFADIMCLTDIQEGIIVRCIQQLND 1156


>gi|403224053|dbj|BAM42183.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
          Length = 1071

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 321/924 (34%), Positives = 497/924 (53%), Gaps = 75/924 (8%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            Y F LD FQ+ ++  L   + V VSAHTSAGKT VAEYAIAMA    ++ IYTSP+KALS
Sbjct: 181  YPFVLDDFQKKAINHLINGKHVFVSAHTSAGKTVVAEYAIAMALSRGEKAIYTSPIKALS 240

Query: 133  NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
            NQKYRE   +F  ++VG++TGDV  +P ASCL++TTEILR +LYRG  V++++  VIFDE
Sbjct: 241  NQKYREFKDKFGPENVGIVTGDVLCNPTASCLIVTTEILRNLLYRGDSVIEQICVVIFDE 300

Query: 191  IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
            IHY+ D  RGVVWEE II LP  +++V LSAT+ N  +FAEWI  + ++   ++ T+FR 
Sbjct: 301  IHYINDLSRGVVWEEVIIMLPKEVQLVMLSATVPNYVEFAEWIGSIMQKEVVIILTNFRS 360

Query: 251  TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS 310
             PL+HY++       +L+V     F ++ +  +       K+  ++   K  G + K   
Sbjct: 361  VPLKHYLY--AHDRFFLLVGSG-GFNKEAYHIMHKYVSTLKVAEKKATFK--GEVQK--- 412

Query: 311  GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN-TQEEKDTVEQVFQN 369
                  + K++K +      PV++F F+R++CEQ+A  M  L+   T+ ++  +    + 
Sbjct: 413  ------LQKLLKTLETEDKLPVVLFCFNRQKCEQYAKDMPNLNLAYTKTQRSKIHLFLKE 466

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            +++ L EEDRNLP +  M+ LL RGI VHHSGLLP+IKE+VE+LF  GL+K LFATETFA
Sbjct: 467  SLEGLTEEDRNLPQLRKMIKLLARGIGVHHSGLLPIIKEMVEILFSRGLIKVLFATETFA 526

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMVDEQMEM 488
            MG+NMPA++VVFT++ K DG  +RY+ S EY QM+GRAGRRG D  G + I   DE  ++
Sbjct: 527  MGVNMPARSVVFTSIYKHDGIKYRYLTSSEYTQMAGRAGRRGLDTFGNVYIFCSDEAPDV 586

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
              L +M++ +   L S FR++Y  +L + SR     T E ++K SF + +    +P + K
Sbjct: 587  QDLTNMIIERSTRLESRFRITYNMLLQIQSRDHMNIT-EMMLK-SFREREKMMKIPLLKK 644

Query: 549  KVSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKKLMSEI------TRPERVLYY 598
            +++K + E  +L       GE  +  Y+K      +  K L SE+       R  + ++ 
Sbjct: 645  RINKKKHELENLPPINCIYGEPTIEGYYK----ALKYSKSLSSELHQHLWNHRDSKQIFK 700

Query: 599  LGSGRLIKVREGGTDWGWGVVVNVV--KKPSAGVGTLPSRGGGYIVPVQLPLIST----- 651
             G   ++          +  +  +V  K  +  V T+ +    Y+     P I++     
Sbjct: 701  YGRVLMLHSTNITQTLSYSFIKEIVDQKNHTFKVVTIITE---YLSDANDPNINSVHHNN 757

Query: 652  -----------LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
                       LS +       L   D  ++++   + +ES     L  ++  K  K   
Sbjct: 758  ECIFYYVHQVGLSSVSFIFENVLLDTDLNRNVVEMNKLIES---NKLTLMSFSKKFKQIS 814

Query: 701  PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNH---EIQQLKSKMRDSQIQ 757
             +  + + +  +L H    +P  K     Q   F+ +  V++   EI+ +  +++D  + 
Sbjct: 815  MQFYETLLKQRDLYHAFSRNPCTKCLLREQ--HFKTQENVDNYELEIEDINKQLKDESLY 872

Query: 758  KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
             F D++ N+  VLK+L  +D  G   LKGR A  I T DEL +TE +      DL   + 
Sbjct: 873  -FYDDMINKLEVLKQLEFLDERGRPTLKGRIATFITTSDELTLTEALAQNILADLTPPEC 931

Query: 818  AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-----LEVNVD-EYV 871
            AA+ S FI  DK+ E+     E   P   LQ++  ++  I  +       L V V  EY 
Sbjct: 932  AAILSAFIYNDKAPEK-----EAPSPTLALQQAKSQVINIHKKIDVVQRALGVRVSQEYH 986

Query: 872  ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
             S     L  ++Y W+ G  F E++++TD+ +G I+R   RLDE   ++   A   G+  
Sbjct: 987  NSLCNFTLSYLVYQWASGVPFNEIMELTDLQDGHIVRVILRLDELCRKMAQTAGVFGDAT 1046

Query: 932  LEKKFAAASESLRRGIMFSNSLYL 955
            L +K      ++RR I+F  SLYL
Sbjct: 1047 LAEKIEEVCRAIRRDIVFKQSLYL 1070


>gi|154415228|ref|XP_001580639.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
 gi|121914859|gb|EAY19653.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
          Length = 1069

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 323/915 (35%), Positives = 502/915 (54%), Gaps = 75/915 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  ++F+ D FQ  S+  LE+N+ V VSA TSAGKT VA+YAIA+A + K R IYTSP+K
Sbjct: 200  AYEFNFKCDNFQVRSMYRLEKNQMVFVSAPTSAGKTVVAQYAIALARQHKMRAIYTSPIK 259

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+L++ F DVG++TGDV+L+ +AS L+MTTEILR MLYRG+++L++V  VIFD
Sbjct: 260  ALSNQKYRDLNKVFHDVGILTGDVSLNRDASVLIMTTEILRSMLYRGADLLRDVDVVIFD 319

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E HY+ D ERGVVWEESII +PP I MVFLSAT+ N T+ A WI     +  +V     R
Sbjct: 320  ECHYISDEERGVVWEESIILMPPHINMVFLSATIPNDTEIAAWIGRTKNRTVYVERHTER 379

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL-KQKIGGRRENGKASGRMAKG 308
            P PL H ++    + L ++    + F    F +L++ F  KQK G +RE           
Sbjct: 380  PVPLVHCLY--AANDLAVLKQPGKTFDSQKFKRLENKFKEKQKKGPKRELFTPQYWQ--- 434

Query: 309  GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
                      K +   +     PV++FSFS++ CE+ A    +      ++K  VE+ F 
Sbjct: 435  ----------KAIDKFVNADLLPVLMFSFSQKNCEKFAEFAKQKCLIDDKQKAHVERFFT 484

Query: 369  NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             ++  L   DR LP IE +  LL  GI +HH G+LP++KE VE+L  +G VK LF T TF
Sbjct: 485  QSISRLKPNDRCLPQIEQVRSLLVNGIGLHHGGMLPILKECVEILLADGYVKVLFCTSTF 544

Query: 429  AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
            AMG+N+PA++  FT+++K++G     +   EY+QMSGRAGRRG D +G  I+MV ++  E
Sbjct: 545  AMGINVPARSCAFTSLEKFNGQEFVNLTPTEYVQMSGRAGRRGLDSQGHAILMVTKEFPE 604

Query: 488  MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
               ++ M  GK   L S F + +  ILNL+ R +G    + ++K S      + A+P   
Sbjct: 605  EAFIQKMFDGKVEKLNSQFYIRFNMILNLI-RTQGMEMTD-LMKRSLSSNTVQSAIPKKK 662

Query: 548  KKVSKLEEEA-------ASLDASGEAEVAEYH---KLKLDIA----------QLEKKLMS 587
            + ++K+EEE         +L+A  E    E++   +  LDI           Q+  K + 
Sbjct: 663  EALAKVEEEIKNYKRADCALNAKLEPNFLEFNTDIEDSLDICGNYAEIIRKLQINAKHIK 722

Query: 588  EITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLP 647
            E    +     L  G+L+ + E G +    ++ NV    +  V    S      VP +  
Sbjct: 723  EKYGRDFKSKILQKGQLVFISEYGGE--IAIIKNVT---ATNVELQTSLVSTLNVPFEKI 777

Query: 648  LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV 707
            LI   +K+  SV              L  QE E    +GL   N +K    +D ++  + 
Sbjct: 778  LIIFQNKVNSSV--------------LMAQEKE----KGLEVANYLKLFGSQDIDLHTMH 819

Query: 708  NQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR-----DSQIQKFRDE 762
             +IE+    +  HP         IR     + +N +I+ ++ K R     D +   F   
Sbjct: 820  TEIEDCWSFISKHPCFTC----DIRSSHYPSSIN-QIENIEKKKRLDDEMDDEKLAFMPT 874

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
            LK+   +LK   +I  D V+Q+KGR +  + + +E + TEL+ N  F+DL+  ++A +AS
Sbjct: 875  LKSMINILKDHDYISQDNVIQIKGRVSIELSSANEFIATELLTNSFFDDLEPAEIAGIAS 934

Query: 823  CFIPVDKSSEQINLRME--LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLM 880
            C +     +++ N  +    A+ +Q +QE A+++ +  +  +++ + D++VE  V P  +
Sbjct: 935  CLVAQKAGNKEENFEIPDYFAEKVQFMQEIAQQLVDDFDNYQID-HQDDFVEYNVNPHAI 993

Query: 881  DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
              +Y W+ GA F +++Q+T I EG+++R     +E L  L  A++ +G V+L +KF  AS
Sbjct: 994  MPVYQWASGADFIDIMQITLIPEGTLVRVIMMTNELLKSLSKASKLIGNVDLVEKFEKAS 1053

Query: 941  ESLRRGIMFSNSLYL 955
            E++RR I+F+ SLYL
Sbjct: 1054 EAIRRDIIFAASLYL 1068


>gi|194745835|ref|XP_001955390.1| GF18738 [Drosophila ananassae]
 gi|190628427|gb|EDV43951.1| GF18738 [Drosophila ananassae]
          Length = 1195

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 322/956 (33%), Positives = 522/956 (54%), Gaps = 86/956 (8%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ ++  LE+ + V V+AHTSAGKT VAEYAIA++ RD  R IYTSP+K
Sbjct: 252  AMDFPFELDVFQKQAILKLEQRQYVFVAAHTSAGKTVVAEYAIALSKRDLTRTIYTSPIK 311

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+  + FKDVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIFD
Sbjct: 312  ALSNQKYRDFRKTFKDVGLITGDLQIEPTASCLIMTTEILRSMLYCGSDITRDLEYVIFD 371

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ + ERG VWEE II LP  + ++ LSAT+ N  + A+W+    K+  +V+ T  R
Sbjct: 372  EVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTMELADWVGSTKKRKVYVISTLKR 431

Query: 250  PTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            P PL H+++   G      ++L+VD + ++ + N+ K  +   + +   +  +G      
Sbjct: 432  PVPLTHFLYTGAGGKSRDDIFLLVDAQGRYLQGNYEKAVERKKEMQGKAKGGSGGGGFNG 491

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
             K       + I  ++  +      PV+ F+ SR  C+ +  ++  +D NT++EK  V++
Sbjct: 492  PKNAKLDQYTWI-GLIDFLRRNNKMPVVAFTLSRNRCDTNVAALQSVDLNTEKEKGAVQK 550

Query: 366  VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             F   +  L   DR +P + ++   L+RGI VHHSG+LP++KE+VE+LFQ GLVK LFAT
Sbjct: 551  FFLQCLAKLKPPDRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFAT 610

Query: 426  ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---- 481
            ETFAMG+NMPA+TVVF + +K+DG   R +  GEYIQM+GRAGRRG D+ G  I++    
Sbjct: 611  ETFAMGVNMPARTVVFDSHRKFDGLEVRNLKPGEYIQMAGRAGRRGHDETGTVILLCKTN 670

Query: 482  VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            V   ME   L+ M+LG P  L S F L Y  IL  + R E     E +++ SF +F  + 
Sbjct: 671  VPPSME---LRPMILGLPEKLQSQFILRYAVILTCL-RIES-IKVEEIMQFSFKEFSQKL 725

Query: 542  ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
             LP   K++   E + A L   GE    +  ++   ++  + + + M  I    ++   L
Sbjct: 726  QLPTQQKQLRVAEAKFAMLPTLGEHLQPLILFYDKAVEYWKEKHRSMKFIVTQAKIQKEL 785

Query: 600  GSGRLIKVREG----------------GTDWGWGVVV-----NVVKKPSAGVGTLPSR-- 636
              GR+I + +G                G D  + V+V       ++      G L  +  
Sbjct: 786  KVGRVIVITQGKHYNKLAVLLLIKSVPGKDTVYKVLVLDHQFKTLESEGLQRGELYYKIL 845

Query: 637  --------------GGGYIVPVQLPLISTLSKIRLSVPPD--LRPLDARQ---------- 670
                          GG  ++ V+   I +++K    V  D  +R  + RQ          
Sbjct: 846  SLTPKYKYFQPEGIGGHAVIDVKALDIVSITKNTFKVDADVIIRNWEQRQLERFKDTPPG 905

Query: 671  -SILLAVQEL----ESRF--PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK---LFAH 720
             +++ AV +L    ES    P  +  +N  K++ +     + +++ ++ L  +   L  H
Sbjct: 906  GTVVKAVTDLYQLNESYMANPASVKFVNLGKEINVNADTELAMLHYVDHLYKQVEDLLPH 965

Query: 721  PLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG 780
                  ++   + ++R+    H I++L+ K     +  + D   N+ +VL+ L +ID   
Sbjct: 966  TNIAGFEQEFAKVYERRMLEIH-IEELRFKNSAKNLTLYPDYC-NKLQVLRALKYIDESD 1023

Query: 781  VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMEL 840
             V LKG+ AC +   +ELL+TEL+    FNDL+  ++AAL S  +   K+  +      +
Sbjct: 1024 EVTLKGKVACEMGQ-NELLITELILCNMFNDLEPAEIAALLSGLVFQAKTQGEPT----I 1078

Query: 841  AKPLQQLQESARKIAE--IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQM 898
             +PL++  ES  +I E  ++ E + +   +   ES +   L++V+Y W++   FAE++++
Sbjct: 1079 PEPLKKYVESFEQINETILKEEQRFQAATE--TESRLNFGLLEVVYEWARNKPFAEIMKL 1136

Query: 899  TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            T++ EG I+R  ++LDE L  ++ AA  +G   L+ K   AS +++R I+F+ SLY
Sbjct: 1137 TEVQEGIIVRCIQQLDETLRDVKTAAIRIGNPGLQSKMEEASAAIKRDIVFTASLY 1192


>gi|313240233|emb|CBY32580.1| unnamed protein product [Oikopleura dioica]
          Length = 649

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/634 (41%), Positives = 391/634 (61%), Gaps = 34/634 (5%)

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           LDF T+ EK  + +V+ NA++CL++EDR LP +  +LP+LK+GI +HH GLLP++KE +E
Sbjct: 20  LDFTTEHEKKLITEVYNNAMECLSDEDRQLPQVANILPILKKGIGIHHGGLLPILKETIE 79

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           +LF E L+K LFATETFAMG+NMPAKTVVFT+ +K+DG   R I  GEYIQMSGRAGRRG
Sbjct: 80  ILFSENLIKCLFATETFAMGVNMPAKTVVFTSHRKFDGKDFRPISGGEYIQMSGRAGRRG 139

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D +GI I+MVD+Q+     K+++ GK   L S F L+Y  +LNL+ R E     E +++
Sbjct: 140 MDTKGIVILMVDDQITPAIAKELLQGKADALNSAFHLTYNMVLNLL-RVE-DINPEWLLE 197

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
            SF+QFQ+   +P +   +  L E    +    E     Y+KL+  I +L +++   I  
Sbjct: 198 KSFYQFQHCNKVPGMISDLDSLSESLKEITVDDEDSATSYYKLRQQIERLGRQMDQIILS 257

Query: 592 PERVLYYLGSGRLIKVREGGTDWGWGVVVNV--------------------------VKK 625
           P+ VL +L  GRL+KVR G  ++GWG++VN                           +KK
Sbjct: 258 PKHVLPFLNPGRLVKVRHGKKNFGWGIIVNFKKQKETGPDEEPIYRVDVLVNCDKDSIKK 317

Query: 626 PSAGVGTLPSRGGGYIVPVQLPL---ISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
            S  +    S   G +  +   L   +S+LS IRL +P  L   D R+     ++E++ R
Sbjct: 318 TSTDLAQPASGSDGSMEVIGFSLKDCLSSLSCIRLMIPQKLTSADERRKCRDQLKEIQRR 377

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVN 741
           +P GLP L+P +DM I DP++ +++ +IE  E +LFAH L+  QD EN +   ++K +V 
Sbjct: 378 YPDGLPLLDPTEDMNIVDPKITEIIRKIEAYEKRLFAHTLHGGQDTENLLTQVEKKQKVL 437

Query: 742 HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
             I+  K +++ ++     DELK R RVL++LG+     V++ KGR AC + T DELL+T
Sbjct: 438 CGIKDKKKELKKAKQVIQLDELKARKRVLRRLGYATDADVIETKGRVACEVSTADELLLT 497

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           E++FNG FN +   Q  ++ SC I  +K      L  ELA PL+ +QE A++IA++  EC
Sbjct: 498 EMIFNGIFNTMTVEQCTSVLSCLIFQEKGDPP-KLAEELAAPLRTMQECAKRIAKVSIEC 556

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           KL++  +EY++  + P LMDV+  W KG TF +++++T+++EGSIIR+ RRL+E L  + 
Sbjct: 557 KLDLEEEEYIKQ-INPNLMDVVDAWCKGGTFKQIVELTEVYEGSIIRAMRRLEELLRDMC 615

Query: 922 AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA+A+G   LE KF    E ++R I+F+ SLYL
Sbjct: 616 HAAKAIGNEELEAKFTQGIEKIKRDIVFAASLYL 649


>gi|429329445|gb|AFZ81204.1| DEAD/DEAH box helicase domain-containing protein [Babesia equi]
          Length = 1116

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 325/934 (34%), Positives = 513/934 (54%), Gaps = 74/934 (7%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            M   + FELD FQ+ ++  L   + + VSAHTSAGKT +AEYAIA+A    ++ IYTSP+
Sbjct: 209  MLINFPFELDDFQKRAIYQLTNLKHIFVSAHTSAGKTVIAEYAIALALTRGEKAIYTSPI 268

Query: 129  KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            KALSNQKYRE  ++F  + VG++TGDV+ +P ASCL++TTEILR +LYRG  V+ ++  V
Sbjct: 269  KALSNQKYREFKKKFGAESVGIVTGDVSCNPGASCLIVTTEILRNLLYRGDSVISQLGVV 328

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDEIHY+ D  RGVVWEE II LP  I++V LSAT+ N ++FA+WI ++ ++   +V T
Sbjct: 329  IFDEIHYISDLSRGVVWEEVIIMLPKTIQLVMLSATVPNYSEFADWIGNIMQKEVVIVVT 388

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS--GR 304
            + RPTPL HY++    +  +L+V+ K  F +D +      +   K+     N K +  G 
Sbjct: 389  NHRPTPLVHYLYIY--NRFFLLVNPK-GFNKDAY---HTMYRYSKMIKTTINKKPTFKGH 442

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN-TQEEKDTV 363
            + K         + K+VK++   K  PV++F F+R +CE +A  M  L+   T+ E+  +
Sbjct: 443  VQK---------LQKLVKILESEKKLPVVLFCFNRAKCEVYAKEMPNLNLAYTRAERSKI 493

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
                + ++  ++E D+N+P +  ++ LL RGI +HHSGLLP+IKE+VE+LF +GL+K LF
Sbjct: 494  HLFLKESLSNISEGDKNIPQLRSIIKLLHRGIGIHHSGLLPIIKEIVEILFSKGLIKVLF 553

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMV 482
            ATETFAMG+NMPA++VVFT++ K DG   RY+ + EY QM+GRAGRRG D  G + I   
Sbjct: 554  ATETFAMGVNMPARSVVFTSIYKHDGQKGRYLTASEYTQMAGRAGRRGLDSFGSVYIFCS 613

Query: 483  DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
            D+  ++  L  M++ K   L S FR++Y  +L + SR     T E ++K SF + +  K 
Sbjct: 614  DDPPDLQDLTAMMIEKSTRLESRFRITYNMLLQIQSRDHMNIT-EMMLK-SFREREKMKN 671

Query: 543  LPDIGKKVSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
            +P   +  SK ++E  SL       GE  + +Y++       +   L + +   +  L  
Sbjct: 672  IPIFKRDSSKKKQELLSLPKIECFYGEPSIEDYYRNLQYSKSVAVNLHNNLWNHKENLQI 731

Query: 599  LGSGRLIKVRE---GGTDWGWGVVVNVVKKPSAGV-------------GTLP---SRGGG 639
               GR+I +      GT   +G +V V++                   GTL    +    
Sbjct: 732  FKPGRIIMINSLTFCGT-LVYGCIVKVLENKDVQFQVLTLLPENFINDGTLAVDIATSLK 790

Query: 640  YIVPVQLPLISTLSKIRLSVPPD----LRPLDARQS-ILLA-----VQELESRFPQGLPK 689
            Y  PV   +   +S   +S   D     +P+  ++  I+L+     + EL       L  
Sbjct: 791  YNCPVHYAIYDHVSLNNISFIFDNITTAKPVPNKEDKIILSAMASEIHELVESDRLQLLS 850

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS---QDENQIRCFQRKAEVNHEIQQ 746
             N  K  K    +  + V +  +L H+L  +   K    +    I+C  +      EI++
Sbjct: 851  FN--KKFKQTSMQFYETVLKQRDLFHRLSRNLCTKCHMRETHFGIQC--KIVNYKREIEE 906

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            +   +RD  +  +  E+ ++  VLK+L  +D  G    KGR A  I TGDE+ +TE++F 
Sbjct: 907  INKNLRDESLHTY-SEMISKLDVLKQLDFLDEKGRPTTKGRIATFITTGDEITLTEVLFQ 965

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEIQNECK 862
                +L+  + AA+ S FI  D++ E+      L +++A+   ++     KI  +Q    
Sbjct: 966  NLLKNLEPEECAAILSAFIYNDRAPEKEAPAPTLGIQMAR--DRVLSIHSKIDVVQRGLD 1023

Query: 863  LEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            + V  +E+  S +  F L  V+Y W+KG  F E++++T++ EG I+R+  RLDE   ++ 
Sbjct: 1024 VRVPFEEF--SALCNFSLSYVVYQWAKGVPFHEIMELTELQEGHIVRAITRLDELCRKIC 1081

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             AA   G+  L  K    S ++RR I+F+ SLYL
Sbjct: 1082 QAANIFGDKELSTKIERVSAAIRRDIVFAPSLYL 1115


>gi|84996619|ref|XP_953031.1| DEAD-family helicase [Theileria annulata strain Ankara]
 gi|65304027|emb|CAI76406.1| DEAD-family helicase, putative [Theileria annulata]
          Length = 1069

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 315/919 (34%), Positives = 506/919 (55%), Gaps = 65/919 (7%)

Query: 73   YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
            Y FELD FQ+ S+  L   + V VSAHTSAGKT VAEY+IA+A    Q+ IYTSP+KALS
Sbjct: 179  YPFELDDFQKKSIYHLINGKHVFVSAHTSAGKTVVAEYSIALAISRGQKAIYTSPIKALS 238

Query: 133  NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
            NQKYRE   +F  ++VG++TGDV  +P ASCL++TTEILR +LYRG  V+ +++ VIFDE
Sbjct: 239  NQKYREFKVKFGNENVGIITGDVLCNPGASCLIVTTEILRNLLYRGDAVIGQISVVIFDE 298

Query: 191  IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
            IHY+ D  RGVVWEE II LP  I++V LSAT+ N  +FAEWI ++ ++   ++ T+ RP
Sbjct: 299  IHYINDLSRGVVWEEVIILLPRNIQLVMLSATVPNYLEFAEWIGNVMQKEVLIIMTNHRP 358

Query: 251  TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS 310
             PL+HY++       + ++   + F ++ +  +       KI  ++   K  G++ K   
Sbjct: 359  VPLKHYLYIYDR---FFLIHGAKGFNKEAYHIMYKYTSTLKINDKKSTFK--GQVQK--- 410

Query: 311  GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF-NTQEEKDTVEQVFQN 369
                  + +++K +      PV++F FSR++CEQ+A  M  L+    + +   +    + 
Sbjct: 411  ------LQRLLKQLESEDKMPVVLFCFSRQKCEQYAKDMPNLNLVYNKVQASKIHLFLKE 464

Query: 370  AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            ++D L+E DRNLP +  M+ LL RGI VHHSGLLP+IKE+VE+LF  GL+K LFATETFA
Sbjct: 465  SLDGLSESDRNLPQLRKMVNLLTRGIGVHHSGLLPIIKEMVEILFSRGLIKVLFATETFA 524

Query: 430  MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMVDEQMEM 488
            MG+NMPA++VVFT++ K DG ++RY+ S EY QM+GRAGRRG D  G + I   DE  ++
Sbjct: 525  MGVNMPARSVVFTSIYKHDGINYRYLTSSEYTQMAGRAGRRGLDTFGNVYIFCCDEPPDV 584

Query: 489  NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
              L +M++ +   L S FR++Y  +L + SR     T E ++K SF + +    +P + K
Sbjct: 585  QDLTNMMIERSTRLESRFRITYNMLLQIQSRDHMNIT-EMMLK-SFREREKMMKIPLLKK 642

Query: 549  KVSKLEEEAASLDA----SGEAEVAEYHK---LKLDIA-QLEKKLMSEITRPERVLYYLG 600
            +++K + E  SL       G+  +  Y+K     ++++ +L + L +   +  RV++  G
Sbjct: 643  QINKKKHELMSLPPISCIYGDPTIENYYKTLNYSMNVSHELHQHLWNH--KESRVIFKFG 700

Query: 601  SGRLIKVREGGTDWGWGVVVNVV--KKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLS 658
               ++   +      +  +  +V  K  +  V T+ +     +    +  +    ++R  
Sbjct: 701  RVLMLHSTKISRTLSYSFITEIVDEKNHTFKVATIITESVSDLDEANIKTVEFNGELRHY 760

Query: 659  VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF 718
               ++    +  S +     L++   + + +L   K ++  D +++    + +++  + F
Sbjct: 761  YNHEVNL--SSVSFIFDHVFLDTDLDRNVIEL--CKLIEKNDFKLMSFSKKFKQISLQ-F 815

Query: 719  AHPLNKSQDENQI-------RCFQRKAEV-------NHE--IQQLKSKMRDSQIQKFRDE 762
               L K +D  Q+        C  R+          N+E  I+ +  +++D  +  F ++
Sbjct: 816  YEILLKQRDLYQLFKGNPCTDCLLREQHFKTQDKIHNYELEIEDINKQLKDESLY-FYED 874

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
            + N+  VLK+L  +D +    LKGR A  I T DE+ +TE++  G  ++L   + AA+ S
Sbjct: 875  MSNKLEVLKQLDFLDENNRPTLKGRIATFITTSDEITLTEVLTQGILSELTPPECAAILS 934

Query: 823  CFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-----LEVNVD-EYVESTVR 876
             FI  DK  E+     E+  P   LQ++  ++  I  +       L V V  E   S   
Sbjct: 935  AFIYNDKVPEK-----EVPSPTLALQQAKNQVVSIHKKIDVVQRALGVRVSHEDFNSLCN 989

Query: 877  PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
              L  VIY W+ G  F E++++TD+ EG I+R   RLDE   +L   A   G   L +K 
Sbjct: 990  FSLSYVIYQWASGTPFQEIMELTDLQEGHIVRVILRLDELCRKLLQTANIFGHQKLAEKI 1049

Query: 937  AAASESLRRGIMFSNSLYL 955
                 ++RR I+F  SLYL
Sbjct: 1050 DLVCNAIRRDIVFKQSLYL 1068


>gi|71028712|ref|XP_763999.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350953|gb|EAN31716.1| hypothetical protein TP04_0364 [Theileria parva]
          Length = 1069

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 313/921 (33%), Positives = 508/921 (55%), Gaps = 59/921 (6%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            ++   Y FELD FQ+ S+  L   + V VSAHTSAGKT VAEY+IA+A    Q+ IYTSP
Sbjct: 174  DLIAQYPFELDDFQKKSIHHLINGKHVFVSAHTSAGKTVVAEYSIALAISRGQKAIYTSP 233

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQKYRE   +F  ++VG++TGDV  +P ASCL++TTEILR +LYRG  V+ +++ 
Sbjct: 234  IKALSNQKYREFKVKFGNENVGIITGDVLCNPGASCLIVTTEILRNLLYRGDSVIGQISV 293

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDEIHY+ D  RGVVWEE II LP  I++V LSAT+ N  +F EWI ++ ++   ++ 
Sbjct: 294  VIFDEIHYINDLTRGVVWEEVIILLPRNIQLVMLSATVPNYLEFGEWIGNVMQKEVLIIM 353

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            T+ RP PL+HY++       + ++   + F ++ +  +       KI  ++   K  G++
Sbjct: 354  TNHRPVPLKHYLYIYDR---FFLIHGAKGFNKEAYHIMYKYTSTLKINDKKSTFK--GQV 408

Query: 306  AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF-NTQEEKDTVE 364
             K         + +++K +      PV++F FSR++CEQ+A  M  L+    + +   + 
Sbjct: 409  QK---------LQRLLKQLESEDKMPVVLFCFSRQKCEQYAKDMPNLNLVYNKVQASKIH 459

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
               + ++D L+E DRNLP +  M+ LL RGI VHHSGLLP+IKE+VE+LF  GL+K LFA
Sbjct: 460  LFLKESLDGLSESDRNLPQLRKMVNLLTRGIGVHHSGLLPIIKEMVEILFSRGLIKVLFA 519

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMVD 483
            TETFAMG+NMPA++VVFT++ K DG ++RY+ S EY QM+GRAGRRG D  G + I   D
Sbjct: 520  TETFAMGVNMPARSVVFTSIYKHDGITYRYLTSSEYTQMAGRAGRRGLDTFGNVYIFCSD 579

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
            E  ++  L +M++ +   L S FR++Y  +L + SR     T E ++K SF + +    +
Sbjct: 580  EPPDVQDLTNMMIERSTRLESRFRITYNMLLQIQSRDHMNIT-EMMLK-SFREREKMMKI 637

Query: 544  PDIGKKVSKLEEEAASLDA----SGEAEVAEYHK---LKLDIA-QLEKKLMSEITRPERV 595
            P + K+++K + E  SL       GE  +  Y+K     ++++ +L + L +   +  +V
Sbjct: 638  PLLKKQINKKKHELMSLPPISCIYGEPTIENYYKTLNYSMNVSHELHQHLWNH--KDSKV 695

Query: 596  LYYLGSGRLIKVREGGTDWGWGVVVNVV--KKPSAGVGTLPSRGGGYIVPVQLPLISTLS 653
            ++  G   ++   +      +  + ++V  K  +  V T+ +     +    +  +    
Sbjct: 696  IFKFGRVLMLHSTKISRTLSYSFITDIVDEKNHTFKVATIITENISDLDDANIRTVEYNG 755

Query: 654  KIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEEL 713
            ++R     ++    +  S +     L++   + + +L   K M+  + +++    + +++
Sbjct: 756  ELRHYYNHEVSL--SSVSFIFDHVFLDTDLDRNVIEL--CKLMENNNFKLMSFSKKFKQI 811

Query: 714  EHKLFAHPLNKSQDENQI-------RCFQRKA--EVNHEIQQLKSKMRDSQIQ------K 758
              + F   L K +D  Q+        C  R+   +  H+I   + ++ D   Q       
Sbjct: 812  SLQ-FYEILLKQRDLYQLFTSNPCTNCLLREQHFKTQHKIYNYELEIEDINKQLKDESLY 870

Query: 759  FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            F +++ N+  VLK+L  +D D    +KGR A  I T DE+ +TE++  G  ++L   + A
Sbjct: 871  FYEDMSNKLEVLKQLDFLDQDNRPTVKGRIATFITTSDEITLTEVLCQGILSELTPPECA 930

Query: 819  ALASCFIPVDKSSEQINLRMELAKPLQQLQESA----RKIAEIQNECKLEVNVDEYVEST 874
            A+ S FI  DK  E+      L  PLQQ +       +KI  +Q    + V+ +++  S 
Sbjct: 931  AILSAFIYNDKVPEKEAPSPTL--PLQQAKNQVVSIHKKIDVVQRALGVRVSYEDF-NSL 987

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
                L  VIY W+ G  F E++++TD+ EG I+R   RLDE   ++   A   G   L +
Sbjct: 988  CNFSLSYVIYQWASGTPFQEIMELTDLQEGHIVRVILRLDELCRKILQTANIFGHQKLAE 1047

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            K      ++RR I+F  SLYL
Sbjct: 1048 KIELVCNAIRRDIVFKQSLYL 1068


>gi|407040405|gb|EKE40111.1| DEAD/DEAH box helicase, putative, partial [Entamoeba nuttalli P19]
          Length = 429

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 227/412 (55%), Positives = 296/412 (71%), Gaps = 16/412 (3%)

Query: 9   KRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGE 68
           KR+   ED +    P  EST       + C HEVAVP G   T+         NP Y  E
Sbjct: 34  KRRKIIEDKYKDLLPRPESTPILEAQYQGCTHEVAVPDGQVATEQTL------NPQYPTE 87

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            AKTY F LD FQR+SV+C+ +NESVLVSAHTSAGKTAVAEYAIA A ++ QRVIYTSP+
Sbjct: 88  PAKTYPFTLDDFQRLSVSCIGQNESVLVSAHTSAGKTAVAEYAIASALKNNQRVIYTSPI 147

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR+L ++F DVGL+TGD+T++  ASCLVMTTEILR MLYRG++V++EVAWVIF
Sbjct: 148 KALSNQKYRDLQEQFTDVGLITGDITINEEASCLVMTTEILRNMLYRGNDVMREVAWVIF 207

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HYM+D+ERGVVWEESII LP  +  VFLSAT+ NA +FA WI ++HKQ CHVVYTD+
Sbjct: 208 DEVHYMRDKERGVVWEESIILLPDTVHYVFLSATIPNAFEFASWIANIHKQACHVVYTDY 267

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RPTPL HY+FP GG+G+YLVVD++ +FRE+ F K   +     +G +  + + + +    
Sbjct: 268 RPTPLCHYLFPAGGNGIYLVVDKECKFREEGFNKALTSLGLDAVGIKTTSKQMNNK---- 323

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
                  D+ KI+ M+M+    PVIVFSF+R+E E  A + +++D  + +EK  + ++F 
Sbjct: 324 ------PDVIKIITMVMKNNLAPVIVFSFNRKELEVMAKTCNRMDLTSDDEKTIIAKIFN 377

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           NA+ CLN EDR L  I  +LPLL +G+ +HHSGLLP++KE VE+LFQEGL+K
Sbjct: 378 NAIQCLNAEDRKLEQITELLPLLLKGVGMHHSGLLPIMKETVEILFQEGLIK 429


>gi|405972024|gb|EKC36821.1| Helicase SKI2W [Crassostrea gigas]
          Length = 1367

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 310/890 (34%), Positives = 471/890 (52%), Gaps = 107/890 (12%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  + FELD FQ+ ++  LE +ESV V+AHTSAGKT                      
Sbjct: 294  DMAYKWEFELDVFQKQAILHLENHESVFVAAHTSAGKTV--------------------- 332

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
              ALSNQKYRE    F DVGL+TGDV ++  ASCL+MTTEILR MLY GS+V++++ WV+
Sbjct: 333  --ALSNQKYREFKLTFGDVGLITGDVQINQTASCLIMTTEILRSMLYNGSDVIRDLEWVV 390

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  +FA+WI    K+   V+ T 
Sbjct: 391  FDEVHYINDAERGVVWEEVLIMLPQHVHIILLSATVPNTLEFADWIGRTKKKKIFVISTL 450

Query: 248  FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
             RP PL+H+++  G +G     L+L+VD K+ F    + K         +  ++E  K+S
Sbjct: 451  KRPVPLEHHLY-TGTTGKTSNELFLIVDGKKNFLTSGYNK--------ALEAKKEKSKSS 501

Query: 303  G----RMAKGGSGSGGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
                 +  +GG  +   +I+  ++ M+ ++   P + F+FS+++ +++A ++   D  T 
Sbjct: 502  QGFGPKGTRGGHPNKDKNIWISVIDMLKKKDKLPAVAFTFSKKKIDENAQNLLSKDLTTA 561

Query: 358  EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
             EK  +   F +A+  L   D+ LP +  M  LLK GI VHHSG+LP++KE+VE+LFQ  
Sbjct: 562  SEKSEIHIFFHSAIKKLKPPDQKLPQVLQMESLLKNGIGVHHSGILPILKEVVEMLFQRA 621

Query: 418  LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
            LVK LF+TETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  G 
Sbjct: 622  LVKILFSTETFAMGVNMPARTVVFDSIRKNDGTCFRDLLPGEYIQMAGRAGRRGLDTTGT 681

Query: 478  CIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             II+    + EM+ L  M+LGKP  L S FRL+Y  ILNL+ R E Q   E ++K SF +
Sbjct: 682  VIILCKGDVPEMSDLHKMMLGKPTKLESQFRLTYSMILNLL-RVE-QLRVEDMMKRSFSE 739

Query: 537  FQYEKALPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKLKLDIAQLEKKLMSEITRP 592
            F ++K +      + +L ++   +          ++ +YH+   D   L +KL   +   
Sbjct: 740  FHHQKDVSKHKVTIDQLHKQIVQIRPIECYLCSVDLEKYHESCRDYQCLRRKLQEVVLSH 799

Query: 593  ERVLYYLGSGRLIKVREGGTDWGWGVVVNVV--------------------------KKP 626
               +  L +GR+I +         G+++N                            K P
Sbjct: 800  PAAIKALTAGRVIVISNSFHSNQLGIILNSTMAANNERVFTCLVLCDKNKSVKSQTEKVP 859

Query: 627  SAGVGT--------LPSRGGGY-IVPVQLPLISTLS--KIRLSVPPDLRPLDARQ----- 670
             +   T        LP    G+ +V V+   IST++   IR+     +  +  RQ     
Sbjct: 860  GSEEVTPVTNTDLFLPEAPCGHDLVQVKAKDISTVTVKSIRVEANKIMDDIKKRQMPRFK 919

Query: 671  ------SILLAVQEL----ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAH 720
                  S+  A QEL    ES    GL  L+PVKD+ + D ++V+    ++ +E     +
Sbjct: 920  DDPPGKSVTTATQELLRMVESNI-HGLAGLDPVKDLHLRDIDLVEQFRSLQLIEDSFRGY 978

Query: 721  P-LNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD 779
              +N        R   R  ++  E + LK  + D  +     E + R +VLK L +ID +
Sbjct: 979  QCINCPHFTEHFREHDRNVKLKEEYKHLKFLLSDESLM-LLPEYEQRVQVLKHLNYIDEN 1037

Query: 780  GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME 839
              VQLKGR AC I +  E+++TEL+F     +L   ++AAL SC +   K+  +  L  E
Sbjct: 1038 NAVQLKGRVACEI-SNHEIMITELVFENILTELHPTEIAALLSCVVFEQKNCSEPKLAPE 1096

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
            L K    +   A+KI   Q  C + + V +Y E   +  LM+V++ W++G
Sbjct: 1097 LVKGKDSILFIAQKITAHQRRCGMNL-VGDY-EDEFKFGLMEVVFEWARG 1144



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 127/224 (56%), Gaps = 4/224 (1%)

Query: 731  IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
             R   R  ++  E + LK  + D  +     E + R +VLK L +ID +  VQLKGR AC
Sbjct: 1146 FREHDRNVKLKEEYKHLKFLLSDESLM-LLPEYEQRVQVLKHLNYIDENNAVQLKGRVAC 1204

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             I +  E+++TEL+F     +L   ++AAL SC +   K+  +  L  EL K    +   
Sbjct: 1205 EI-SNHEIMITELVFENILTELHPTEIAALLSCVVFEQKNCSEPKLAPELVKGKDSILSI 1263

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            A+KI+  Q +C + + V +Y E   +  LM+V++ W++G  FAE+  +TD+ EG I+R  
Sbjct: 1264 AQKISAFQRKCGMNL-VGDY-EDEFKFGLMEVVFEWARGLPFAEITGLTDVQEGIIVRCI 1321

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +RL E L  +R AA+ +G+  L +K   AS+ ++R I+F+ SLY
Sbjct: 1322 QRLHETLRDVRNAARIIGDPVLYRKMEEASQMIKRDIVFAASLY 1365


>gi|240276813|gb|EER40324.1| RNA helicase [Ajellomyces capsulatus H143]
 gi|325095147|gb|EGC48457.1| translation repressor [Ajellomyces capsulatus H88]
          Length = 1297

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 337/1009 (33%), Positives = 517/1009 (51%), Gaps = 166/1009 (16%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 334  DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKSIYTSP 393

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F+DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 394  IKALSNQKFRDFRNTFEDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 453

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 454  FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 513

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKIGGRREN--- 298
             RP PL+HY++      ++ +VD  + F E      D+ +  +D    QK      N   
Sbjct: 514  KRPVPLEHYLW--ADKSMHKIVDSNKNFIEKGWKKVDDILSGRDKLRTQKAADVHSNNNR 571

Query: 299  --------------GKA----------------------------------SGRMAKGGS 310
                          G                                    +G +A+ G 
Sbjct: 572  GGHGDRGRGGQPQRGNQRGGPQRGGTQRGGVQQQQRGGTQQRGRGQPAPHRTGNIARTGR 631

Query: 311  GSGGSDIFK-------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
            G G + + +       +V+ + +    P  VF FS++ CE++A S+S  DF T  EK ++
Sbjct: 632  GGGRTTVAQDRNVWVHLVQHLRKENLLPACVFVFSKKRCEENADSLSNQDFCTAAEKSSI 691

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
              + + ++  L  EDR LP I  +  LL RGI VHH GLLP+IKE+VE+LF + LVK LF
Sbjct: 692  HMIIEKSLARLKAEDRVLPQIRRVRELLSRGIGVHHGGLLPIIKEIVEILFAKTLVKVLF 751

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
            ATETFAMGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 752  ATETFAMGLNLPTRTVVFSGFRKHDGRSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVTS 811

Query: 484  EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
             + E            AP   T R +                 E +IK SF +   +  L
Sbjct: 812  GRDE------------APPAGTLRQA--------------LKIEEMIKRSFSENATQALL 845

Query: 544  PDIGKKVSKLE--------EEAASLDASGEA---EVAEYHKL--KLDIAQLEKKLMSEIT 590
            P+  K+V   E        E  A  D   EA      EY +L  KL I  L   +   + 
Sbjct: 846  PEHQKQVQLSEASLEKIKREPCAICDIDMEACHNAAVEYSRLTAKLHIKLLASPVGRRLF 905

Query: 591  RPERVLYYLGSG-RLIKV--REG---GTDWGWGVV----VNVVKKPSAGVGTLPSRG--- 637
              + V+ +  +G R + +  REG   G +    V     +N  + PS  +  LP+     
Sbjct: 906  LAKTVVVFKKNGVRTVGMLAREGMAPGPNLNLEVFEFGPINGSRHPSDILPYLPAFRHLF 965

Query: 638  ------------GGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL------ 679
                          Y +P++     T + +++  P     +  ++S+ +A ++L      
Sbjct: 966  SPLSTEPNEMVLKTYKIPLEDLECVTSTVLKIGGPTWYLNI-KKESLKVAQKDLAPLCTS 1024

Query: 680  -ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ-------IEE---LEHKLFAHPLNKSQDE 728
             +SR    L   + VKD+     +VV+++NQ       IE    L    F        DE
Sbjct: 1025 WKSRSWDEL-AWDRVKDL-----QVVEILNQRQAQVVIIESSNCLRCPQFLKHFEMQHDE 1078

Query: 729  NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
             Q++      E   +++QL   M D  +Q   D  + R  VLK LG +D    VQLKG+ 
Sbjct: 1079 WQVK------ENISQLKQL---MSDQNLQLLPD-YEQRILVLKDLGFVDEACRVQLKGKV 1128

Query: 789  ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQ 848
            AC I + DEL++TEL+    F + +  ++ AL S F+  +K+     L   L K  + + 
Sbjct: 1129 ACEIHSADELVLTELILENVFAEYEPEEIVALLSAFVFQEKTESVPTLTPRLEKGKEAII 1188

Query: 849  ESARKIAEIQNECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            + + ++ + Q + ++ ++ D+  +   +P   L++V+Y W++G +F  +  +TD+ EG+I
Sbjct: 1189 KISERVNDFQIQHQVILSSDDSNDFVSKPRFSLVEVVYEWARGMSFNRITDLTDVMEGTI 1248

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +R   RLDE   ++++AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1249 VRVITRLDETCREVKSAAKLVGDPTLYNKTQQAQELIKRDVIFAASLYM 1297


>gi|301111187|ref|XP_002904673.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
 gi|262095990|gb|EEY54042.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
          Length = 1374

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/544 (47%), Positives = 345/544 (63%), Gaps = 30/544 (5%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+  V  LER+E V V+AHTSAGKT +AEYAIAM+ R   R IYTSP
Sbjct: 355 EMAMKYEFELDVFQKECVIHLERHECVFVAAHTSAGKTVIAEYAIAMSQRHMTRTIYTSP 414

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+   +F   +VGL+TGDV+++P+ASCLVMTTEILR MLYRG+++++++ W
Sbjct: 415 IKALSNQKYRDFRSKFGPDNVGLITGDVSINPDASCLVMTTEILRSMLYRGADIIRDIEW 474

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDEIHY+ D ERGVVWEE II LP  I MVFLSAT  N  +F++WI    KQ  HV+ 
Sbjct: 475 VIFDEIHYINDSERGVVWEEVIIMLPEHIGMVFLSATTPNHLEFSDWIGRTKKQKIHVIS 534

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDNFVKLQDTFLKQKIGGRREN 298
           T  RP PLQH+++   G  L+ + D    +        +     + D     + GG    
Sbjct: 535 TYKRPVPLQHFLY--AGKELFKIYDATSGYLPNAHGAAKSKLFPMSDKSKAGRGGGAVAR 592

Query: 299 GKASGRMAKGGSGSGGS--DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
           G  S    +    SGG   +  K++  + ++   PV+VF+FS+R CE+ A  ++KLD +T
Sbjct: 593 GGGSSANVRSIRTSGGDQGEWTKLINTLKDKALLPVVVFAFSKRLCEESASKLAKLDLST 652

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
             E+  +    + +V  L   DR LP +  M  +LKRGI VHH GLLP+IKE+VE+LF  
Sbjct: 653 PSERSEIHLFLETSVQRLQGSDRELPQVLTMKEMLKRGIGVHHGGLLPIIKEMVEILFGR 712

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVK LF+TETFAMG+NMPA+TVVF  ++K DG + R +  GEY QM+GRAGRRG D  G
Sbjct: 713 GLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLVPGEYTQMAGRAGRRGLDSVG 772

Query: 477 ICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
             II   ++  E  +L+ M+ GK   L S FRL+Y  +LNL+ R E   T E ++K SF 
Sbjct: 773 TVIIACWNDVPEATSLRTMLAGKATSLSSQFRLTYNMMLNLL-RVE-VLTVEDMMKRSFS 830

Query: 536 QFQYEKA-----LPDI---GKKV-----SKLEEEAASLDASGE-AEVAEYHKLKLDIAQL 581
           +F  +KA     LP +   GK +       L E+   L+ASGE A++  +++LK D  +L
Sbjct: 831 EFHTQKALASKNLPQLIHKGKTLLQQLERSLVEDYPHLEASGELAQMQAFYQLKRDKREL 890

Query: 582 EKKL 585
           EKKL
Sbjct: 891 EKKL 894



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 158/274 (57%), Gaps = 7/274 (2%)

Query: 686  GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQ 745
             +P ++ ++++K+ D EV     Q ++L   + +HP   + D   +    +K +   ++Q
Sbjct: 1103 AIPYVDLMRELKVNDLEVATGYTQWQQLYSLVVSHPC--ATDSPSVSRVMKKVDKMFKLQ 1160

Query: 746  ----QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
                ++  ++ +  +  F D  + R  VLK+LG+I  DGVVQ+KGR AC I+T +EL++T
Sbjct: 1161 AYLVRMTRQLSNDSLSLFPD-FQQRLSVLKRLGYISDDGVVQVKGRVACEINTCEELVLT 1219

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            E++F      L+  ++ A+ S  I  +KS  +  L   L    + ++  A  +  IQ E 
Sbjct: 1220 EMIFENVLATLEPEEIVAVLSALIFQEKSQSEPTLTPTLETTREVVKNIAESLGLIQLEQ 1279

Query: 862  KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
            +LE++   Y +  +   LM+V+Y W++G  F ++ ++TD+ EGSI+R   RLDE   ++R
Sbjct: 1280 RLEIDPAVYCKGALNFGLMEVVYEWARGMPFKQLCELTDVQEGSIVRCITRLDEVCREVR 1339

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             AA+ +G+  L +K   ASE+++R ++F++SLYL
Sbjct: 1340 NAARVIGDPQLYRKMEVASEAIKRDVVFASSLYL 1373


>gi|348669763|gb|EGZ09585.1| hypothetical protein PHYSODRAFT_318253 [Phytophthora sojae]
          Length = 1421

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/551 (46%), Positives = 346/551 (62%), Gaps = 43/551 (7%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+  V  LER+E V V+AHTSAGKT +AEYAIAM+ +   R IYTSP
Sbjct: 399 EMAMKYDFELDVFQKECVIHLERHECVFVAAHTSAGKTVIAEYAIAMSQKHMTRTIYTSP 458

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+   +F   +VGL+TGDV+++P ASCLVMTTEILR MLYRG+++++++ W
Sbjct: 459 IKALSNQKYRDFRTKFGPDNVGLITGDVSINPEASCLVMTTEILRSMLYRGADIIRDIEW 518

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDEIHY+ D ERGVVWEE II LP  I MVFLSAT  N  +F++WI    KQ  HV+ 
Sbjct: 519 VIFDEIHYINDSERGVVWEEVIIMLPEHIGMVFLSATTPNHLEFSDWIGRTKKQKIHVIS 578

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK----- 300
           T  RP PLQH+++   G  L+ + D         ++       K KI    +  K     
Sbjct: 579 TYKRPVPLQHFLY--AGKELFKLYDAT-----TGYLPNAHGAAKAKIFPASDKSKAGGRG 631

Query: 301 -----------ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
                      A+ R  +   G  G +  K++  + ++   PV+VF+FS+R CE+ A  +
Sbjct: 632 GRAVARGGGSSANARTLRTSGGDQG-EWTKLINTLKDKSLLPVVVFAFSKRLCEESANKL 690

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
           +KLD +T  E+  +    + +V  L   DR LP + +M  +LKRGI VHH GLLP+IKE+
Sbjct: 691 AKLDLSTPSERSEIHLFLETSVQRLQGSDRELPQVLMMKEMLKRGIGVHHGGLLPIIKEM 750

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
           VE+LF  GLVK LF+TETFAMG+NMPA+TVVF  ++K DG + R +  GEY QM+GRAGR
Sbjct: 751 VEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKNFRDLLPGEYTQMAGRAGR 810

Query: 470 RGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
           RG D  G  II   ++  E  +L+ M+ GK   L S FRL+Y  ILNL+ R E   T E 
Sbjct: 811 RGLDSVGTVIIACWNDVPEPTSLRTMLAGKATSLSSQFRLTYNMILNLL-RVE-VLTVED 868

Query: 529 VIKNSFHQFQYEKALP--DIGKKVSK-----------LEEEAASLDASGE-AEVAEYHKL 574
           ++K SF +F  +KAL   +I K + K           L E+   L+ASGE A++ E+++L
Sbjct: 869 MMKRSFSEFHTQKALASKNIPKLIQKGKTLHQQLERSLVEDYPHLEASGELAQMQEFYQL 928

Query: 575 KLDIAQLEKKL 585
           K +  +LEKKL
Sbjct: 929 KREKRELEKKL 939



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 151/265 (56%), Gaps = 7/265 (2%)

Query: 695  DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQ----QLKSK 750
            ++K+ D EV     Q +++   + +HP   + D   +     K E   +++    ++  +
Sbjct: 1159 ELKVNDLEVATGYTQWQQMHSMVVSHPC--ATDSPSVSRVMGKVEKIFKLKAYLVRMTRE 1216

Query: 751  MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
            + +  +  F D  + R  VLK+LG+I  DGVVQ+KGR AC I+T +EL++TE++F     
Sbjct: 1217 LSNDSLSLFPD-FQQRLSVLKRLGYISKDGVVQVKGRVACEINTCEELVLTEMIFENVLA 1275

Query: 811  DLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
            +L+  ++ A+ S  I  +KS  +  L   L    + ++  A  +  IQ E  LE++   Y
Sbjct: 1276 NLEPEEIVAVLSALIFQEKSQSEPTLTPTLESTREVVKNIAESLGLIQLEQHLEIDPAVY 1335

Query: 871  VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
             +  +   LM+V+Y W++G  F ++ ++TD+ EGSI+R   RLDE   ++R AA+ +G+ 
Sbjct: 1336 CKGALNFGLMEVVYEWARGMPFKQLCELTDVQEGSIVRCITRLDEVCREVRNAARVIGDP 1395

Query: 931  NLEKKFAAASESLRRGIMFSNSLYL 955
             L +K   ASE+++R ++F++SLYL
Sbjct: 1396 QLYRKMEVASEAIKRDVVFASSLYL 1420


>gi|328865535|gb|EGG13921.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
          Length = 1279

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/571 (42%), Positives = 360/571 (63%), Gaps = 15/571 (2%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           +A  + + I   FA  + N   A  Y FELD FQ+ ++  +E+ ESV +SAHTSAGKT +
Sbjct: 345 WAFHETKEIFTPFAELITNP--AIVYPFELDSFQKQAIVHMEKGESVFISAHTSAGKTVI 402

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTE 167
           AEYAIAMA ++  R IYTSP+KALSNQK+R+    F DVGL+TGDV++SP +SCLV+TTE
Sbjct: 403 AEYAIAMAAKNMTRAIYTSPIKALSNQKFRDFKNTFGDVGLITGDVSVSPASSCLVLTTE 462

Query: 168 ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
           ILR MLY+G+++++++ WVIFDE+HY+ D ERGVVWEE II LP  +K++ LSAT++N  
Sbjct: 463 ILRSMLYKGADLIRDIEWVIFDEVHYLNDYERGVVWEEVIIMLPAHVKIILLSATVANPL 522

Query: 228 QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
           +FA+WI    K P +V+ T  RP PL+H++     + L+ +VD    F  + +    ++ 
Sbjct: 523 EFADWIGRTKKMPIYVIGTLKRPVPLEHFIH-TPSNDLFKIVDSNRNFLMEGYSNAYNSL 581

Query: 288 LKQKIGGRRENGKASGRMAKGGSGSGGSDI--FKIVKMIMERKFQPVIVFSFSRRECEQH 345
            K      + N K +G+     S +  S     +++ ++ E++  PVIVFSFS+ +C+++
Sbjct: 582 YKVDKNNDK-NKKTTGQHGNQASFASVSKTGWTRLIGLLKEKQQLPVIVFSFSKNKCQEY 640

Query: 346 AMSM-SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLP 404
           A S+   L   +  EK+ ++   + ++  L  ED++LP I  +   L+RGI +HH GLLP
Sbjct: 641 AQSLGGHLVLTSNSEKNIIKIFIEESLARLRPEDKDLPQIHQIKDFLERGIGIHHGGLLP 700

Query: 405 VIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMS 464
           ++KELVE+LF + LVK LFATETFAMG+NMPAKTVV++  +K DG + R +  GEY QMS
Sbjct: 701 IVKELVEILFSKSLVKVLFATETFAMGVNMPAKTVVYSHTRKHDGINFRDLLPGEYTQMS 760

Query: 465 GRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQ 523
           GRAGRRG D  G  II   + M + ++   M+LG+P+ L S FRL+Y  ILNL+   +  
Sbjct: 761 GRAGRRGLDKVGTVIITAWKDMPDSSSYSSMILGQPSKLNSQFRLTYNMILNLLRVQD-- 818

Query: 524 FTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKLKLDIA 579
           F  E +IK SF +F  +K +P++ K +  L  E  +++      GE ++  Y+ +  +  
Sbjct: 819 FKVEDMIKRSFSEFSTQKDIPELQKAIESLSIEYQAIEPIQCILGEPDIENYYNMFSEAQ 878

Query: 580 QLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
            L + +   I       Y+ G GR+I +  G
Sbjct: 879 VLNENVQRTILSSNNQQYF-GDGRVIVLSIG 908



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 150/274 (54%), Gaps = 3/274 (1%)

Query: 683  FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVN 741
             P G P ++P+  +K+   E VD  ++++ ++  +     N      N     + K ++ 
Sbjct: 1007 LPLGPPSIDPISKLKLRSIEFVDQFDKLQNIQKLIPTSKCNNCPKLSNHYTITKHKHDIK 1066

Query: 742  HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
             ++ + K    D  +Q    E + R ++L+ LG+ID +  V +KG+ +  ++T +EL++ 
Sbjct: 1067 TKMNEYKHTSSDENLQ-LMPEFQIRLKILETLGYIDGENNVMVKGKVSREVNTCEELIIP 1125

Query: 802  ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
            EL+F   F  L+  ++ ++ SC I  +K + + +L   L +    L +   K+ +++ + 
Sbjct: 1126 ELIFENAFLMLEPSEIVSVLSCLIFQEKDAIEPSLTPRLIQARDNLIKINEKLCQLEIDH 1185

Query: 862  KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
             L+V ++E  E  ++  LM+V Y W++G  F ++ ++T++ EG+I+R+  R+ E   ++R
Sbjct: 1186 GLQVTLEEK-EKILKFGLMEVTYEWARGMPFNDICKLTNVLEGTIVRAITRIGETCQEVR 1244

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              A+ +G+  L +K   A   ++R I+F++SLY+
Sbjct: 1245 NCARIIGDTKLYQKMDEAIRLIKRDIVFASSLYV 1278


>gi|327302936|ref|XP_003236160.1| DEAD/DEAH box RNA helicase [Trichophyton rubrum CBS 118892]
 gi|326461502|gb|EGD86955.1| DEAD/DEAH box RNA helicase [Trichophyton rubrum CBS 118892]
          Length = 1203

 Score =  457 bits (1177), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 311/931 (33%), Positives = 476/931 (51%), Gaps = 86/931 (9%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 316  DMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 375

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 376  IKALSNQKFRDFRSTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 435

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 436  FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTP 495

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE---NGKASGR 304
             RP PL+HY++   G  ++ +VD +++F E  +    D      + GR +      A  +
Sbjct: 496  KRPVPLEHYLW--AGKEIFKIVDSEKRFIEKGWKDADDI-----LSGRDKVKAQKAAEAQ 548

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             A+GG                    Q        R +     +           +K  + 
Sbjct: 549  AARGGHQPERGRGQGQRGSGQRGTGQRGGPQQRGRGQPSARGIGNIARTGRGGADKSAIH 608

Query: 365  QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
             V + ++  L  EDR+LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFA
Sbjct: 609  MVVEKSLTRLRIEDRDLPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKILFA 668

Query: 425  TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
            TETFAMGLN+P +TVVF+  +K DG   R + +GEY QM+GRAGRRG D  G  II+   
Sbjct: 669  TETFAMGLNLPTRTVVFSGYRKHDGRGFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSG 728

Query: 485  QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            + E  T+                               Q   E +IK SF +   +  LP
Sbjct: 729  RDEAPTIN------------------------------QTHIEEMIKRSFSENATQALLP 758

Query: 545  DIGKKV----SKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
            +  K+V    + LE+      A  + ++A  H+  ++  +L  +L + +           
Sbjct: 759  EHEKQVQLSEASLEKIKREPCAVCDVDLAACHQASVEYERLTVQLHTLLLASPVGKRMYA 818

Query: 601  SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ--------LPLISTL 652
            + +L+  ++ G          V+ K     G +PS     I PV+        LP +   
Sbjct: 819  AKQLVVFKKNGVR-----TAGVLMKEGVTGGPIPSLNVFEIGPVEPRRFPSDILPYMPVF 873

Query: 653  SKIRLSVPPD-----LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE-------- 699
             +    +P       L+      + L  V     R       LN  KD +          
Sbjct: 874  RENFHPLPTSPGNMVLKSCKVPIANLECVTGTTVRVGGPTWCLNIHKDKEFSKLCASWTD 933

Query: 700  ------DPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE-------IQQ 746
                  D E V  ++  E LE +     + KS    Q   F +  E+ H+       I Q
Sbjct: 934  KAWDELDWERVKDMSVREVLEQRAQQVKIAKSCACLQCPQFLKHFEMQHDEWQVKENISQ 993

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            LK  M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL++TEL+  
Sbjct: 994  LKLLMSDQNLQLLPD-YEQRIQVLKDLGFVDEASRVQLKGKVACEIHSADELVLTELILE 1052

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
                + +  ++ AL S F+  +K+  + NL   L    + +   + ++ ++Q + ++ ++
Sbjct: 1053 NVLAEYEPEEIVALLSAFVFQEKTENEPNLTPRLEAGKEAIIAISDRVNDLQIKHQVVLS 1112

Query: 867  VDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
             D+  +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE   +++ AA
Sbjct: 1113 SDDANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDETCREVKNAA 1172

Query: 925  QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + VG+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1173 KLVGDPSLYNKMQLAQEMIKRDVIFAASLYL 1203


>gi|148694809|gb|EDL26756.1| mCG15924, isoform CRA_e [Mus musculus]
          Length = 1239

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 299 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 358

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 359 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 418

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 419 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 478

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 479 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 537

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 538 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 597

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 598 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 657

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 658 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 717

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 718 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 775

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 776 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 831

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 832 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 864



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 661  PDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            P  R      ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +
Sbjct: 943  PKFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELI 1002

Query: 718  -FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
              A  ++  +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++
Sbjct: 1003 RGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYV 1061

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L
Sbjct: 1062 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQL 1120

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+ 
Sbjct: 1121 PSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELA 1179

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1180 GLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1237


>gi|2944423|gb|AAC05282.1| hypothetical protein [Mus musculus]
 gi|148694805|gb|EDL26752.1| mCG15924, isoform CRA_a [Mus musculus]
          Length = 1236

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 296 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 355

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 356 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 415

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 416 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 475

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 476 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 534

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 535 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 594

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 595 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 654

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 655 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 714

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 715 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 772

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 773 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 828

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 829 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 861



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 661  PDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            P  R      ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +
Sbjct: 940  PKFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELI 999

Query: 718  -FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
              A  ++  +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++
Sbjct: 1000 RGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYV 1058

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L
Sbjct: 1059 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQL 1117

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+ 
Sbjct: 1118 PSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELA 1176

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1177 GLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1234


>gi|148694806|gb|EDL26753.1| mCG15924, isoform CRA_b [Mus musculus]
          Length = 1095

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 304 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 363

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 364 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 423

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 424 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 483

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 484 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 542

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 543 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 602

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 603 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 662

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 663 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 722

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 723 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 780

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 781 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 836

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 837 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 869


>gi|74204725|dbj|BAE35430.1| unnamed protein product [Mus musculus]
          Length = 1244

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 304 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 363

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 364 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 423

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 424 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 483

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 484 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 542

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 543 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 602

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 603 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 662

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 663 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 722

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 723 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 780

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 781 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 836

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 837 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 869



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +  A  ++  +
Sbjct: 958  AVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELIRGAQCVHSPR 1017

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1018 FPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAG 1076

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1077 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVER 1135

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1136 VKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1194

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1195 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1242


>gi|87252727|ref|NP_067312.2| superkiller viralicidic activity 2-like [Mus musculus]
 gi|42406362|gb|AAH65999.1| Superkiller viralicidic activity 2-like (S. cerevisiae) [Mus
           musculus]
          Length = 1244

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 304 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 363

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 364 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 423

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 424 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 483

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 484 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 542

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 543 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 602

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 603 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 662

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 663 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 722

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 723 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 780

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 781 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 836

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 837 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 869



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 661  PDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            P  R      ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +
Sbjct: 948  PKFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELI 1007

Query: 718  -FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
              A  ++  +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++
Sbjct: 1008 RGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYV 1066

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L
Sbjct: 1067 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQL 1125

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+ 
Sbjct: 1126 PSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELA 1184

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1185 GLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1242


>gi|26325700|dbj|BAC26604.1| unnamed protein product [Mus musculus]
          Length = 1244

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 304 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 363

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 364 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 423

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 424 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 483

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 484 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 542

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 543 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 602

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 603 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 662

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 663 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 722

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 723 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 780

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 781 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 836

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 837 SVGRVVVVKNEEHHNAMGVILQVSSNSTSRVFT 869



 Score =  136 bits (342), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 661  PDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            P  R      ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +
Sbjct: 948  PKFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELI 1007

Query: 718  -FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
              A  ++  +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++
Sbjct: 1008 RGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYV 1066

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L
Sbjct: 1067 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQL 1125

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+ 
Sbjct: 1126 PSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV-GELNLGLVEVVYEWARGMPFSELA 1184

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1185 GLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1242


>gi|148694808|gb|EDL26755.1| mCG15924, isoform CRA_d [Mus musculus]
          Length = 1241

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 301 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 360

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 361 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 420

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 421 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 480

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 481 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 539

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 540 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 599

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 600 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 659

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 660 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 719

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 720 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 777

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 778 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 833

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 834 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 866



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 661  PDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            P  R      ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +
Sbjct: 945  PKFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELI 1004

Query: 718  -FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
              A  ++  +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++
Sbjct: 1005 RGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYV 1063

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L
Sbjct: 1064 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQL 1122

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+ 
Sbjct: 1123 PSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELA 1181

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1182 GLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1239


>gi|148694810|gb|EDL26757.1| mCG15924, isoform CRA_f [Mus musculus]
          Length = 1099

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 296 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 355

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 356 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 415

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 416 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 475

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 476 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 534

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 535 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 594

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 595 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 654

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 655 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 714

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 715 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 772

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 773 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 828

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 829 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 861



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 47/76 (61%)

Query: 879  LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
            L++V+Y W++G  F+E+  ++   EG ++R  +RL E    LR AA+ VGE  L  K   
Sbjct: 1022 LVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMET 1081

Query: 939  ASESLRRGIMFSNSLY 954
            A+  LRR I+F+ SLY
Sbjct: 1082 AATLLRRDIVFAASLY 1097


>gi|148694814|gb|EDL26761.1| mCG15924, isoform CRA_i [Mus musculus]
          Length = 1256

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 316 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 375

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 376 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 435

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 436 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 495

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 496 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 554

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 555 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 614

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 615 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 674

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 675 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 734

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 735 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 792

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 793 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 848

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 849 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 881



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 661  PDLRPLDARQSILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL 717
            P  R      ++  AVQEL      +P G P L+P+ D++++D  VV+   +  +LE  +
Sbjct: 960  PKFRKDPPLAAVTTAVQELLRLAQSYPAGPPTLDPINDLQLKDVAVVEGGLRARKLEELI 1019

Query: 718  -FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
              A  ++  +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++
Sbjct: 1020 RGAQCVHSPRFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYV 1078

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D  G V+L GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L
Sbjct: 1079 DEAGTVKLAGRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQL 1137

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L + +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+ 
Sbjct: 1138 PSTLKQGVERVKAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELA 1196

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             ++   EG ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 GLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1254


>gi|149027985|gb|EDL83436.1| superkiller viralicidic activity 2-like, isoform CRA_a [Rattus
           norvegicus]
          Length = 1103

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 268/700 (38%), Positives = 391/700 (55%), Gaps = 75/700 (10%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 296 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 355

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 356 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 415

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 416 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 475

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 476 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 534

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 535 GPAQDRGVYLALLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 594

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 595 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 654

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 655 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 714

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 715 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 772

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ +    +   I      L  L
Sbjct: 773 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETRNMIQRRIMESVNGLKSL 828

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL------PS-----RGGGYIVPVQLPL 648
             GR++ V+        GV++ V    ++ V T       P+     R  G   P  +P 
Sbjct: 829 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFTTLVLCDKPAVSENPRDKGPATP-DVPH 887

Query: 649 ISTLSKIRLSVP----------------------------------------PDLRPLDA 668
              L   +L +P                                        P  R    
Sbjct: 888 PDDLVGFKLFLPEGPCEHTVAKLQPGDVAAISTKVLRVNGEKISEDFSKRQQPKFRKDPP 947

Query: 669 RQSILLAVQE---LESRFPQGLPKLNPVKDMKIEDPEVVD 705
             ++  AVQE   L   +P G P L+P+ D++++D  VV+
Sbjct: 948 LAAVTTAVQELLRLAQAYPAGPPTLDPINDLQLKDVAVVE 987



 Score = 64.7 bits (156), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 8/111 (7%)

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPF-------LMDVIYCWSKGATFAEVIQMTDIFE 903
            ARK+ E+    +  V+   +   TV  F       L++V+Y W++G  F+E+  ++   E
Sbjct: 992  ARKLEELIRGAQC-VHSPRFPAQTVEEFVGELNFGLVEVVYEWARGMPFSELAGLSGTPE 1050

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1051 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1101


>gi|74199459|dbj|BAE41420.1| unnamed protein product [Mus musculus]
          Length = 884

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 354/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 304 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 363

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 364 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 423

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 424 YINDAERGVVWEEVLIMLPEHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 483

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 484 LEHYLFTGNSPKTQGELFLLLDSRGAFHTQGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 542

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 543 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 602

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL+RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 603 RCLARLRGSDRQLPQVLHMSELLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 662

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 663 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 722

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 723 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 780

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL D+ K++  LEE     D +G+ A++ EY+    ++ + +  +   I      L  L
Sbjct: 781 QALADLTKRLGALEEP----DVTGQLADLPEYYSWAEELTETQNMIQRRIMESVNGLKSL 836

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 837 SVGRVVVVKNEEHHNALGVILQVSSNSTSRVFT 869


>gi|426352517|ref|XP_004043758.1| PREDICTED: helicase SKI2W isoform 1 [Gorilla gorilla gorilla]
          Length = 1246

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 245/574 (42%), Positives = 354/574 (61%), Gaps = 22/574 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253 LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487 LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
           GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545 GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368 QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
           Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605 QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428 FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
           FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665 FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
           EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725 EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540 EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
           E+AL ++ KK+  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783 EQALAELTKKLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599 LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
           L +GR++ V+        GV++ V    ++ V T
Sbjct: 839 LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFT 872



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 158/291 (54%), Gaps = 13/291 (4%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQEL       P G P L+PV D++++D  VV+   +  +LE  +  A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDMSVVEGGLRARKLEELIQGAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FPAQYLKLQERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS---CFIPVDKSSEQINLRMELAKP 843
            R AC + +  ELL+TELMF+   + L   ++AAL S   C  P D   +  N    L + 
Sbjct: 1079 RVACAMSS-HELLLTELMFDNALSTLRPEEIAALLSGLVCQSPGDAGDQLPN---TLKQG 1134

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            +++++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   E
Sbjct: 1135 IERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPE 1193

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1194 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|301627725|ref|XP_002943020.1| PREDICTED: helicase SKI2W [Xenopus (Silurana) tropicalis]
          Length = 1249

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/571 (42%), Positives = 350/571 (61%), Gaps = 27/571 (4%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++A  + FELDPFQ+ ++ CLE   SV ++AHTSAGKT VAEYAIA++ +   R IYTSP
Sbjct: 303 DLAFKHPFELDPFQKKAIQCLEAGSSVFIAAHTSAGKTVVAEYAIALSLKHMTRAIYTSP 362

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F DVGL+TGDV L   ASCL+MTTEILR MLY GS+V++++ WVI
Sbjct: 363 IKALSNQKFRDFKITFGDVGLITGDVQLYTGASCLIMTTEILRSMLYNGSDVIRDLEWVI 422

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  +FA+WI  + K+  +V+ T 
Sbjct: 423 FDEVHYINDAERGVVWEEVLIMLPDHVNIILLSATVPNTVEFADWIGRIKKKKIYVISTT 482

Query: 248 FRPTPLQHYVFPVGGS-----GLYLVVDEKEQFREDNFV------KLQDTFLKQKIGGRR 296
            RP PL+HY++  G S       +L++D    F+   +       K + +   Q  G + 
Sbjct: 483 RRPVPLEHYLY-TGNSQKTQNQFFLLLDALGGFQTKGYYAAVEAKKERSSKYSQTFGAKH 541

Query: 297 ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
            +G         G G        +V+ +  R   PV+VF+FSR  CEQ+A ++S +D  +
Sbjct: 542 PHGV--------GPGHDKGTWLSLVQSLKIRDALPVVVFTFSRTRCEQNATALSTVDLCS 593

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
             EK  V+  +   +  L   DR LP +  ML LLKRGI +HHSG+LP++KE+VE+LF  
Sbjct: 594 TAEKSEVQTYYTKCLSRLRGADRQLPQVLHMLDLLKRGIGIHHSGILPILKEVVEMLFSR 653

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVK LFATETFAMG+NMPA+TVVF +++K DG + R +  GEYIQM+GRAGRRG D+ G
Sbjct: 654 GLVKILFATETFAMGVNMPARTVVFDSIRKHDGSNFRDLTPGEYIQMAGRAGRRGLDNTG 713

Query: 477 ICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           + II+    + EM+ L  M+LGKP  L S FRL+Y  ILNL+ R E     E ++K SF 
Sbjct: 714 MVIILCKADVPEMSDLHKMMLGKPTQLQSQFRLTYSMILNLL-RVEA-LRVEDMMKRSFA 771

Query: 536 QFQYEKALPDIGKKVSKLEEEAASL-DASGEAEVAEYHKLKLDIAQL---EKKLMSEITR 591
           + + ++      +++  L ++ A + D     ++A+ H   + + +L    + +   +  
Sbjct: 772 ESRTQRDSKAHEQRIKLLTQQLADVGDIECSGDLADLHDYFVTVQELIYTRETVQKRVVE 831

Query: 592 PERVLYYLGSGRLIKVREGGTDWGWGVVVNV 622
               +  L  GR+I +      W  GV++ V
Sbjct: 832 SINGMKCLSVGRIIIINTEYHSWVPGVILQV 862



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 165/274 (60%), Gaps = 5/274 (1%)

Query: 683  FPQG-LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL-NKSQDENQIRCFQRKAEV 740
             P G L  L PV D+++++ E+V+ V++ + LE  L +    N  +   Q    +++++V
Sbjct: 977  LPSGSLSSLCPVNDLQLKELELVEAVSRGKRLEEALQSFSCYNSPRFNTQYILLEQRSQV 1036

Query: 741  NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
             +E+++L+    D  +     E + R  VL+ L +ID  G VQLKGR AC + +  ELLV
Sbjct: 1037 LNELERLRFLTSDQSL-SLLPEYQQRVNVLRTLQYIDDGGAVQLKGRVACEV-SSHELLV 1094

Query: 801  TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            TEL+ +G  + L   ++AAL SC +   K+  +  L   L + +++++E A ++A IQ E
Sbjct: 1095 TELVLDGALSPLAPEEIAALLSCLVFQHKTQCEPRLTDTLKQGVKKVRELAERLALIQRE 1154

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            C L  +V+++V +  +  L +V+Y W++G  F+E++ +TDI EG I+R  +RLDE    +
Sbjct: 1155 CGLRESVEDFV-AQYKFGLTEVVYEWARGMPFSEIMTLTDIQEGLIVRCVQRLDEACRDV 1213

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            R+AA+ VG+  L  K  AAS+ ++R I+F+ SLY
Sbjct: 1214 RSAARLVGDATLCAKMDAASQLIKRDIIFAASLY 1247


>gi|303389086|ref|XP_003072776.1| Ski2 ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
           50506]
 gi|303301918|gb|ADM11416.1| Ski2 ATP-dependent RNA helicase [Encephalitozoon intestinalis ATCC
           50506]
          Length = 868

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 319/965 (33%), Positives = 496/965 (51%), Gaps = 135/965 (13%)

Query: 18  HVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFEL 77
           +V+G  E + T+K+ ++    V +  +PS Y+   DE I                  FE 
Sbjct: 12  NVSGA-EAKGTEKKYSVM---VKQNWIPSDYSQYVDERILNI--------------DFET 53

Query: 78  DPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYR 137
           D FQ+ +   L RN SV VSAHTS+GKT VAEYAI+++ +   R IYTSP+KALSNQKY 
Sbjct: 54  DTFQKQAFYFLSRNSSVFVSAHTSSGKTLVAEYAISLSQKHGTRTIYTSPIKALSNQKYH 113

Query: 138 ELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDR 197
           +  Q++ DVG++TGDV ++P A CLVMTTEILR ++YR  ++L++  +V+FDE+HY+ D 
Sbjct: 114 DFKQKYDDVGIITGDVQVNPTAKCLVMTTEILRNLVYRNGDLLRDTEFVVFDEVHYINDS 173

Query: 198 ERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYV 257
           ERGVVWEE II +P  I  + LSAT+ N  +F+EW+     +  +V+ T  R  PL+H +
Sbjct: 174 ERGVVWEECIIMIPRNINFIMLSATIPNGLEFSEWVGRTKDRTIYVISTGKRAVPLEHVI 233

Query: 258 FPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA-SGRM---AKGGSGSG 313
           +      +Y + +                      GG+ EN     G +   +K    +G
Sbjct: 234 Y--CDWNVYTINE----------------------GGKTENASNFKGDLVPFSKKNRPTG 269

Query: 314 GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
              I  +   ++++K  P I F FS+R CE +A  +  L+ N  + ++ V+     A  C
Sbjct: 270 KFKILDLANFVVKKKLTPAIFFCFSKRRCEDYAEILRTLNLNDAKSREEVKMFLNEATKC 329

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L+ ED+NLP +  M  ++  G+AVHH  LLP +KE VELLF   LVK L ATETFAMG+N
Sbjct: 330 LSSEDKNLPQVLNMSSMVLNGVAVHHGSLLPFVKECVELLFSMNLVKLLIATETFAMGVN 389

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
           MPAK  VF ++ K D  + RY+ SGEYIQMSGRAGRRG D  G  +I   +   ++T++ 
Sbjct: 390 MPAKCCVFLSLSKIDNGTFRYVSSGEYIQMSGRAGRRGMDAVGTVMIADPKMPPLSTIQG 449

Query: 494 MVLGKPAPLVSTFRLSYYSIL----------NLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           ++ G P  L S F+LS+  IL          +LM R+ G+  +         Q  YEK +
Sbjct: 450 IIQGAPFSLSSQFKLSFGLILISLRSNIRVEDLMRRSYGEHRS---------QRNYEKDM 500

Query: 544 PDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
               KK+S+LE      + S   ++A+Y     +I     KL+ +          LG GR
Sbjct: 501 ----KKLSELERYQGK-ECSVCGDLAKYINAVEEICAKNWKLIGKYN-------VLGEGR 548

Query: 604 LIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDL 663
            I ++        G V  V+     G   L  + G      +    S +S   L+ P ++
Sbjct: 549 QILLKNNSV----GTVEKVL-----GTSVLLKQEG------EFQSSSPISTRFLAHPLNI 593

Query: 664 R-PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
           R PLD R  + LA  ++      G    N           V+D++ +I +L+   + + +
Sbjct: 594 RKPLD-RSKVDLA--DVFCVLEDGRAFWN------YNTTNVMDVL-EIRKLK-SWYDYLI 642

Query: 723 NKSQDENQIRCFQRKA-EVNH---EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA 778
           ++ +D  +       A ++ H   EI+++ +K     +    DE  NR   L++ G +  
Sbjct: 643 SEEKDCKEFDLHYLSALDMLHRRKEIEKISTKYNACSLGMI-DEYNNRMEFLRRKGFV-- 699

Query: 779 DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRM 838
           DG + +KGRA   I T +E+LV E++F+  F ++   ++ +L S  I             
Sbjct: 700 DGTITMKGRAGAEIHTVNEVLVVEMIFSNEFKEMCGRKIISLMSSMI------------- 746

Query: 839 ELAKPLQQLQESARKIAEIQNE--CKLEVNVDEYVESTVRPF------LMDVIYCWSKGA 890
                 ++  ES R   EI  E   +L  ++DE    ++ PF      L+D +Y W  G+
Sbjct: 747 HEEGGEEEPGESLRSECEIMKEYFARLSKDLDEL---SIPPFPPLNFSLVDAVYDWCNGS 803

Query: 891 TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
           +  +++   D+ EG+ +R   RL+E   +L + +  +G+ +LEKK   AS S++R I+F 
Sbjct: 804 SLVKIVSKYDVLEGTFVRLILRLEECCRELISISAMIGDKDLEKKIEDASASMKRDIIFL 863

Query: 951 NSLYL 955
            SLYL
Sbjct: 864 PSLYL 868


>gi|291395821|ref|XP_002714338.1| PREDICTED: superkiller viralicidic activity 2-like homolog
           [Oryctolagus cuniculus]
          Length = 1246

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLEQHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A   M +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPMHQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           + L ++ KK+  LEE     D +G+ A++ EY+    ++ +    +   I      L  L
Sbjct: 784 QTLAELSKKLGALEEP----DVTGQLADLPEYYSWGEELTETRNVIQRRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 840 SVGRVVVVKNQEHHNALGVILQVSSNSTSRVFT 872



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 156/288 (54%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQEL      +P G P L+PV D++++D  VV+   +  +LE  +  A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FPAQYLKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1079 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVER 1137

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1138 VRSVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1196

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|355719538|gb|AES06634.1| superkiller viralicidic activity 2-like protein [Mustela putorius
           furo]
          Length = 1245

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           +SFE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WSFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLNSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  ++ EY+    ++ +    +   I      L  L
Sbjct: 784 QALAELTKRLGALEEP----DTTGQLVDLPEYYSWGEELTETRSLIQQRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +GR++ V+        GV++ V    ++ V T
Sbjct: 840 SAGRVVVVKNQEYHNTLGVILQVSSNSTSRVFT 872



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 156/288 (54%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQEL      +P G P L+PV D++++D  VV+   +  +LE  +  A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIGSAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FSAQYLKLQERVQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEVGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1079 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVER 1137

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1138 VRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1196

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|159118603|ref|XP_001709520.1| Helicase [Giardia lamblia ATCC 50803]
 gi|157437637|gb|EDO81846.1| Helicase [Giardia lamblia ATCC 50803]
          Length = 1361

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/612 (41%), Positives = 350/612 (57%), Gaps = 70/612 (11%)

Query: 1   MEESLMAGKRKAPEEDLHVTGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTF 60
           M++ L+   +K P   + V+ +  E+  KK         H V  P GY + +D A     
Sbjct: 35  MDQGLLEQTKKLPIV-VDVSESATEDPLKKIH-------HSVVFPHGYEIPRDPA----- 81

Query: 61  ANPVYN----GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF 116
            N +Y      E+   + +ELDPFQR ++  L    SVLV+AHTSAGKT VAEY IA A 
Sbjct: 82  -NKIYTCEPPAELPVKFPYELDPFQRRAIGALHIGHSVLVAAHTSAGKTTVAEYIIATAL 140

Query: 117 RDKQRVIYTSPLKALSNQKYRELHQEF---KDVGLMTGDVTLSPNASCLVMTTEILRGML 173
              QRV+YT+P+KALSNQKY++L         VG+MTGD TL+  A  LVMTTEILR ML
Sbjct: 141 AQNQRVVYTTPIKALSNQKYQDLKLAAYTKGSVGIMTGDTTLNRTAGVLVMTTEILRNML 200

Query: 174 YRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWI 233
           ++G+E+L+E+ +VIFDE+HYM++ ERG+VWE+ I  L   I+  FLSAT+ NA++FA W+
Sbjct: 201 HQGAELLREIGYVIFDEVHYMRNSERGLVWEDCIAMLSSNIQFCFLSATVPNASEFAGWV 260

Query: 234 CHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD--EKEQFREDNFVKLQDTFLK-- 289
             LH  P HVVYT +RP PL H++ PVGG GLY +    +K + R D  +K +       
Sbjct: 261 ASLHSIPVHVVYTQYRPVPLMHFLCPVGGDGLYPICSSIDKNKIRHDQVIKAKANLPHDN 320

Query: 290 -QKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS 348
            Q +    E G +     K    +    + K++K ++ R   P+IVF+F +++CE +AM 
Sbjct: 321 AQAVARGEEEGTSGHSNKKQQQKAVRDTLHKVMKNLIARDCFPLIVFAFGKKKCETYAMD 380

Query: 349 MSKLDFN------------------------------------------TQEEKDTVEQV 366
                FN                                          T E+   ++ +
Sbjct: 381 FISDYFNNGQRATSRPPLQRTYGEEPQALIPQDNQQATQAQPPVIQSLVTPEQTRVIDNI 440

Query: 367 FQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATE 426
           F  A+ CL EEDRNL  I ++  +L+RGIAVHHSGLLP  KE++E+LF EGLVK L+ATE
Sbjct: 441 FDAALKCLPEEDRNLRPIVVLRGMLRRGIAVHHSGLLPWAKEIIEILFVEGLVKILYATE 500

Query: 427 TFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM 486
           TFAMGLN+PA+ ++F+  KK+DG + R + +GEY+QM+GRAGRRG D +G+ I M     
Sbjct: 501 TFAMGLNLPARAIIFSEFKKFDGLTSRLVTAGEYVQMAGRAGRRGIDKQGMSICMFSTAD 560

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
           E + +  ++ G   PL S +RLS+ S+L LM   +   + E VIK SF QFQ    LP  
Sbjct: 561 ECDNIVKVIQGTTEPLNSAYRLSFNSVLKLMQIEDT--SPEQVIKRSFLQFQQLFRLPRC 618

Query: 547 GKKVSKLEEEAA 558
             K+  LE   A
Sbjct: 619 IDKILALENANA 630



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 118/241 (48%), Gaps = 19/241 (7%)

Query: 731  IRCFQRKAE---VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL--K 785
            + C +R A+       IQ+    +  S++ K ++ L+    + +  G  D++    L  K
Sbjct: 1118 LNCMRRDAKKQIFKQYIQEADDLILSSELVKLKNFLRREHFIEEIPGATDSEAAYLLTDK 1177

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI------PVDKSSEQINLRME 839
            GR AC + + +E+++ E +F   F DL    +A + +  +           S Q+ +  +
Sbjct: 1178 GRVACHVSSANEVILVECLFEAQFTDLTPRVLAGVLASLLGEGTGASGSSKSNQLQMDPK 1237

Query: 840  LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD----VIYCWSKGATFAEV 895
            L++ L +L++    ++ +  +C  E    E   +TV   + D    + + W+ G TF E+
Sbjct: 1238 LSQALTKLKQI---VSMLLKDCATEDTTLELRCTTVDHIVDDTTAVIAFSWAAGQTFQEI 1294

Query: 896  IQMT-DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + +    FEG+I+R  RRL   ++QL  A + +G+  L+ +  A  +++ R I+  NSLY
Sbjct: 1295 LDIDRSQFEGNIVRMFRRLINLVDQLIIAVEVIGDERLKARLTAVHDAIFRDIIKVNSLY 1354

Query: 955  L 955
            +
Sbjct: 1355 V 1355


>gi|73972333|ref|XP_538841.2| PREDICTED: helicase SKI2W [Canis lupus familiaris]
          Length = 1246

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/573 (42%), Positives = 353/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           +SFE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WSFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  +++EY+    ++ +    +   I      L  L
Sbjct: 784 QALDELTKRLGALEEP----DTTGQLVDLSEYYGWGEELTETRSLIQRRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +GR++ V+        GV++ V    ++ V T
Sbjct: 840 SAGRVVVVKNQEYHNTLGVILQVSSNSASRVFT 872



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQ 726
            ++  AVQEL      +P G P L+PV D++++D  VV+   +  +LE  ++ A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FSAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1079 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVER 1137

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  AR+I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1138 VRAVARRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1196

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|440907637|gb|ELR57758.1| Helicase SKI2W, partial [Bos grunniens mutus]
          Length = 1240

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/573 (42%), Positives = 353/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 301 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 360

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 361 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 420

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 421 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 480

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 481 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 539

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 540 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 599

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 600 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 659

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 660 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 719

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 720 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 777

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ KK+  LEE     + +G+  ++ EY+    ++ +   ++   I      L  L
Sbjct: 778 QALAELTKKLGALEEP----EVTGQLVDLPEYYSWGEELTETRSQIQHRIIESVNGLKSL 833

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +GR++ V+        GV++ V    ++ V T
Sbjct: 834 SAGRVVVVKNQEHHNALGVILQVSSNSTSRVFT 866



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 142/263 (53%), Gaps = 4/263 (1%)

Query: 693  VKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM 751
            V D++++D  VV+   +  +LE  +  A  ++  +   Q    + + ++  E+++L+  +
Sbjct: 979  VNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPRFPAQYLKLRERMQIQKEMERLRFLL 1038

Query: 752  RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
             D  +     E   R  VL+ LG++D  G V+L GR AC + +  ELL+TELMF+   + 
Sbjct: 1039 SDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAGRVACAMSS-HELLLTELMFDNALST 1096

Query: 812  LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
            L   ++AAL S  +          L   L + +++++  A++I E+Q  C L   V+E+V
Sbjct: 1097 LRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVERVRTVAKRIGEVQAACGLNQTVEEFV 1156

Query: 872  ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
               +   L++V+Y W++G  F+E+  ++   EG ++R  +RL E    LR AA+ VGE  
Sbjct: 1157 -GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLVVRCIQRLAEMCRSLRGAARLVGEPV 1215

Query: 932  LEKKFAAASESLRRGIMFSNSLY 954
            L  K   A+  LRR I+F+ SLY
Sbjct: 1216 LGAKMETAATLLRRDIVFAASLY 1238


>gi|156120140|ref|NP_001095287.1| helicase SKI2W [Sus scrofa]
 gi|148724903|emb|CAN87691.1| superkiller viralicidic activity 2-like (S. cerevisiae) [Sus
           scrofa]
          Length = 1246

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGSFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTNQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R+  PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRAREQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  ++ EY+    ++ +    +   I      L  L
Sbjct: 784 QALAELTKRLGALEEP----DVTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 840 SVGRVVVVKSREHHNALGVILQVSSTSTSRVFT 872



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 156/289 (53%), Gaps = 9/289 (3%)

Query: 671  SILLAVQELESRFPQ----GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKS 725
            ++  AVQEL  R  Q    G P L+PV D++++D  VV+   +  +LE  +  A  ++  
Sbjct: 960  AVTTAVQEL-LRLAQAHLAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSP 1018

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L 
Sbjct: 1019 RFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLA 1077

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
            GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + ++
Sbjct: 1078 GRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVE 1136

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            ++Q  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG 
Sbjct: 1137 RVQAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGL 1195

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1196 VVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|410958798|ref|XP_003986001.1| PREDICTED: helicase SKI2W [Felis catus]
          Length = 1246

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  ++ EY+    ++ +    +   I      L  L
Sbjct: 784 QALAELTKRLGTLEEP----DTTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +GR++ V+        GV++ V    ++ V T
Sbjct: 840 SAGRVVVVKNQEYHNTLGVILQVSSNSTSRVFT 872



 Score =  140 bits (352), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 157/288 (54%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQ 726
            ++  AVQEL      +P G P L+PV D++++D  VV+   +  +LE  ++ A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FSAQYLKLQERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1079 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVER 1137

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1138 VRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1196

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|149732068|ref|XP_001492630.1| PREDICTED: helicase SKI2W [Equus caballus]
          Length = 1246

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFADVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  L
Sbjct: 784 QALAELTKRLGALEEP----DTTGQLVDLPEYYNWGEELTETQGLIQRRIIDSVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 840 SVGRVVVVKNQEHHNALGVILQVSSNSTSRVFT 872



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 155/288 (53%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQEL      +P G P L+PV D++++D  VV+   +  +LE  +  A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAYPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    + + ++  E+++L   + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FPAQYLKLRERMQIQKEMERLSFLLSDQSLLL-LPEYHQRVEVLRTLGYVDDAGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1079 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSSGDPGDQLPSTLKQGVER 1137

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1138 VRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1196

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|162138264|gb|ABX82836.1| putative superkiller viralicidic activity 2 protein [Sus scrofa]
          Length = 1246

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGSFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTNQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R+  PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRAREQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  ++ EY+    ++ +    +   I      L  L
Sbjct: 784 QALAELTKRLGALEEP----DVTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
             GR++ V+        GV++ V    ++ V T
Sbjct: 840 SVGRVVVVKSREHHNALGVILQVSSTSTSRVFT 872



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 156/289 (53%), Gaps = 9/289 (3%)

Query: 671  SILLAVQELESRFPQ----GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKS 725
            ++  AVQEL  R  Q    G P L+PV D++++D  VV+   +  +LE  +  A  ++  
Sbjct: 960  AVTTAVQEL-LRLAQAHLAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSP 1018

Query: 726  QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            +   Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L 
Sbjct: 1019 RFPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLA 1077

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
            GR AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + ++
Sbjct: 1078 GRVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKQGVE 1136

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            ++Q  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG 
Sbjct: 1137 RVQAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGL 1195

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1196 VVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|301788522|ref|XP_002929677.1| PREDICTED: LOW QUALITY PROTEIN: helicase SKI2W-like [Ailuropoda
           melanoleuca]
          Length = 1246

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 242/573 (42%), Positives = 352/573 (61%), Gaps = 20/573 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRHIYVISTVARPVP 486

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 487 LEHYLFTGNSPKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 545

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 546 GPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 605

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 606 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 665

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 666 AMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 725

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 726 MADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 783

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ K++  LEE     D +G+  ++ EY+    ++ +    +   I      L  L
Sbjct: 784 QALAELTKRLGALEEP----DTTGQLVDLPEYYSWGEELTETRSLIQRRIMESVNGLKSL 839

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +GR++ V+        GV++ V    ++ + T
Sbjct: 840 SAGRVVVVKNQEYHNTLGVILQVSSNSTSRIFT 872



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 154/288 (53%), Gaps = 7/288 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF-AHPLNKSQ 726
            ++  AVQEL       P G P L+PV D++++D  VV+   +  +LE  ++ A  ++  +
Sbjct: 960  AVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIWGAQCVHSPR 1019

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    Q + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1020 FSAQYLKLQERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVKLAG 1078

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R    + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1079 RVGWGM-SXHELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGEQLPSTLKQGVER 1137

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L++V+Y W++G  F+E+  ++   EG +
Sbjct: 1138 VRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVEVVYEWARGMPFSELAGLSGTPEGLV 1196

Query: 907  IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1197 VRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1244


>gi|50303465|ref|XP_451674.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640806|emb|CAH02067.1| KLLA0B03179p [Kluyveromyces lactis]
          Length = 1001

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/594 (42%), Positives = 363/594 (61%), Gaps = 36/594 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 310 ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 369

Query: 130 ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           ALSNQK+R+  ++F DV  GL+TGDV ++P A CL+MTTEILR MLYRG++++++V +VI
Sbjct: 370 ALSNQKFRDFKEDFDDVDVGLITGDVQINPEADCLIMTTEILRSMLYRGADLIRDVEFVI 429

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D+ RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 430 FDEVHYVNDQTRGVVWEEVIIMLPQHVKFILLSATVPNTFEFANWVGRTKQKNIYVISTP 489

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR---ENGKASGR 304
            RP PL+  ++      +  V+++K +F   NF + ++      IG  +   +NGK SG 
Sbjct: 490 KRPVPLEINIW--AKKKVIPVINDKREFLPQNFREHKELLTASSIGSSKNSPKNGKPSGN 547

Query: 305 ---MAKG--GSGSGGSDI--------------FKIVKMIMERKFQPVIVFSFSRRECEQH 345
              + KG  G G+ GS++              + ++K +      P +VF FS++ CE++
Sbjct: 548 QKTITKGSKGVGAKGSNMSTFYKYDGASKTTWYDLLKNLRANDLLPAVVFVFSKKRCEEY 607

Query: 346 AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
           A S+   D  T +E+  +    + ++  L ++DR LP I  +  LL RGIAVHH GLLP+
Sbjct: 608 ADSIEAADLLTAKERSAIHIFIEKSISRLRKDDRELPQITKIRSLLSRGIAVHHGGLLPI 667

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           +KEL+E+LF +G VK LFATETFAMGLN+P +TVVF+ ++K DG+  RY+  GE+ QM+G
Sbjct: 668 VKELIEILFAKGFVKLLFATETFAMGLNLPTRTVVFSEIQKHDGEKKRYLLPGEFTQMAG 727

Query: 466 RAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
           RAGRRGKD  G  I+M     ++  + KD+ LG P  L S FRL+Y  ILNL+ R E   
Sbjct: 728 RAGRRGKDKTGTVIVMSYSRPIDEASFKDVSLGVPTRLQSQFRLTYNMILNLL-RIEA-L 785

Query: 525 TAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS--GEAEVAEY---HKLKLDIA 579
             E +IK SF +   E   P+  K++ +L+ +  S+D S   E  V EY   H L     
Sbjct: 786 RVEEMIKFSFSENSKETLKPEQEKEIKELQSKVDSIDISEFSEETVKEYESVHNLLTGYR 845

Query: 580 QLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
           Q    ++SEI     +   L  GR I  R+   +   G+V  +   P  GV T+
Sbjct: 846 QACVDIISEIDESRELGKRLSRGRFIFYRKNDGNPVLGLVTRI--DPPNGVCTV 897


>gi|119623960|gb|EAX03555.1| superkiller viralicidic activity 2-like (S. cerevisiae), isoform
           CRA_b [Homo sapiens]
 gi|119623961|gb|EAX03556.1| superkiller viralicidic activity 2-like (S. cerevisiae), isoform
           CRA_b [Homo sapiens]
          Length = 990

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/574 (42%), Positives = 354/574 (61%), Gaps = 22/574 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           ++FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 307 WAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 366

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 367 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 426

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +V+ T  RP P
Sbjct: 427 YINDVERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVISTVTRPVP 486

Query: 253 LQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           L+HY+F  G S      L+L++D +  F    +    +   K+++    +   A     +
Sbjct: 487 LEHYLF-TGNSSKTQGELFLLLDSRGAFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQ 544

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
           GG          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    
Sbjct: 545 GGPAQDRGVYLSLLASLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFL 604

Query: 368 QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
           Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATET
Sbjct: 605 QRCLARLRGSDRQLPQVLHMSELLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATET 664

Query: 428 FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
           FAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D  G  I++   ++ 
Sbjct: 665 FAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVP 724

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QY 539
           EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +
Sbjct: 725 EMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAH 782

Query: 540 EKALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
           E+AL ++ K++  LEE     D +G+  ++ EY+    ++ + +  +   I      L  
Sbjct: 783 EQALAELTKRLGALEEP----DMTGQLVDLPEYYSWGEELTETQHMIQRRIMESVNGLKS 838

Query: 599 LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
           L +GR++ V+        GV++ V    ++ V T
Sbjct: 839 LSAGRVVVVKNQEHHNALGVILQVSSNSTSRVFT 872


>gi|432089456|gb|ELK23398.1| Helicase SKI2W [Myotis davidii]
          Length = 1245

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/569 (42%), Positives = 349/569 (61%), Gaps = 20/569 (3%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 306 WPFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 365

Query: 133 NQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           NQK+R+    F DVGL+TGDV L P ASCL+MTTEILR MLY GS+V++++ WVIFDE+H
Sbjct: 366 NQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVH 425

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L ++  +VV T  RP P
Sbjct: 426 YINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLKRRQIYVVSTAARPVP 485

Query: 253 LQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           L+HY+F    P     L+L++D +  F    +    +   K+++    +   A     +G
Sbjct: 486 LEHYLFTGNSPKTQGELFLLLDSRGTFHTKGYYAAVEA-KKERMSKHAQTFGAKQPTHQG 544

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
           G          ++  +  R   PV+VF+FSR  C++ A  ++ LD  T  EK  +    Q
Sbjct: 545 GPAQDRGVYLSLLTSLRTRAQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQ 604

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+LF  GLVK LFATETF
Sbjct: 605 RCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETF 664

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPA+TVVF +++K DG++ R +  GEY+QM+GRAGRRG D  G  I++   ++ E
Sbjct: 665 AMGVNMPARTVVFDSMRKHDGNAFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPE 724

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYE 540
           M  L  M+ GKP+ L S FRL+Y  ILNL+ R +     E ++K SF +F        +E
Sbjct: 725 MVDLHRMMTGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKRSFSEFPSRKDSKAHE 782

Query: 541 KALPDIGKKVSKLEEEAASLDASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +AL ++ KK+  LEE     D +G+  ++ EY+    ++ +    +   +      L  L
Sbjct: 783 QALAELTKKLGALEEP----DLTGQLVDLPEYYSWGEELTETRSLIQRRVMESVNGLKSL 838

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSA 628
            +GR++ V+        GV++ V    S+
Sbjct: 839 SAGRVVVVKTQEHHNALGVILQVSSNSSS 867



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 153/291 (52%), Gaps = 4/291 (1%)

Query: 665  PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLN 723
            PL A  +    +  L    P G P L+PV D++++D  VV+   +  +LE  +  A  ++
Sbjct: 956  PLAAVTAAAQELLRLAQAHPTGPPTLDPVNDLQLKDVSVVEGGLRARKLEEVIQGAQCVH 1015

Query: 724  KSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
              +   Q    Q + ++  EI++L+  + D  +     E   R  VL+ LG++D  G V+
Sbjct: 1016 SPRFPAQYLKLQERRQLQKEIERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDEAGTVK 1074

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            L GR AC + +  ELL+TEL+F+   + L   ++AAL S  +          L   L + 
Sbjct: 1075 LAGRVACAMSS-HELLLTELLFDNALSALRPEEIAALLSGLVCQSPGDTGEQLPSTLKQG 1133

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
            +++++  A++I E+Q  C L   V+E+V   +   L+ V+Y W++G  F+E+  ++   E
Sbjct: 1134 VERVRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLVGVVYEWARGMPFSELAGLSGTPE 1192

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G ++R  +RL E    LR AA+ VGE  L  K   A+  LRR I+F+ SLY
Sbjct: 1193 GLVVRCIQRLAEMCRSLRGAARLVGEPVLGAKMETAATLLRRDIVFAASLY 1243


>gi|395334752|gb|EJF67128.1| antiviral helicase [Dichomitus squalens LYAD-421 SS1]
          Length = 1261

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 263/624 (42%), Positives = 360/624 (57%), Gaps = 68/624 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 277 EMAHKYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSP 336

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+  Q F    VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +
Sbjct: 337 IKALSNQKYRDFKQTFGAASVGILTGDVQINPEANCLIMTTEILRSMLYKGADLIRDVEF 396

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 397 VIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 456

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
           T  RP PL+HY++   G  L+ +VD    F    +   QD   +              Q+
Sbjct: 457 TAKRPVPLEHYLY--AGRDLHKIVDADRNFISAGYKDAQDALRRKQDKEREAQGLPPVQR 514

Query: 292 IGGRR---ENGKASG-------------------RMAKGGSGSGGSDIFK---------I 320
           +G R    + G+  G                   R A    G G    F          +
Sbjct: 515 MGARAAAPQRGQRGGPQARGGGQRGGPPLRGAPARGATPSRGGGSGRTFHQPDKNLYVHL 574

Query: 321 VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
           +  + +R   PV+VF+FS++ CE++A +++ LD +T  EK  +    + A+  L   DR 
Sbjct: 575 LGNLKKRALLPVVVFTFSKKRCEENAGTLTNLDLSTSVEKSEIHVAVEKALSRLKGSDRQ 634

Query: 381 LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
           LP I  M  LL RGI VHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPAK VV
Sbjct: 635 LPQIRRMRELLSRGIGVHHGGLLPIVKEVVEILFARGLVKVLFATETFAMGVNMPAKCVV 694

Query: 441 FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKP 499
           F+ ++K DG S R I  GEY QM+GRAGRRG D  G  II+  DE  E  TL  M+LG P
Sbjct: 695 FSHIRKHDGRSFRDILPGEYTQMAGRAGRRGLDATGTVIIVANDECPEQTTLSHMILGTP 754

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
           + L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  KKV ++E E A 
Sbjct: 755 SKLQSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQRLLPENQKKVVQVELELAQ 812

Query: 560 LDASGEAEVA-----EYHKLKLDIAQLEKKLM----SEITRPERVLYYLGSGRLIKVREG 610
           +    E EV       ++ +  DI +  + L+    S   R      YL  GR++ +R+G
Sbjct: 813 M-PQLECEVCAPDIERFYDITYDIVESNQNLLKLAGSSGGR------YLEPGRVVVLRDG 865

Query: 611 GTDWGWGVVVNVVKKPSAGVGTLP 634
                 GV++  V   +    T P
Sbjct: 866 HFKSNIGVLLRKVSLANTEDNTKP 889



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 123/212 (58%), Gaps = 5/212 (2%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I +LK  + +  ++   D  + R  VLK+L  ID +  V LKGR AC I++ +EL++TEL
Sbjct: 1055 IAKLKLSISEQNLELIPD-YEQRIEVLKELKFIDDNSTVLLKGRVACEINSANELVLTEL 1113

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +   T    +  +V AL SCF+  +K+  +  +  +L + L  +   A ++  +Q+  K 
Sbjct: 1114 ILENTLAAYEPEEVVALLSCFVFQEKTDVEPVIPPKLQEGLAAIVAIADRVERVQDRHK- 1172

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
             V  +E+   T++P L++V+Y W+KG  F ++  +TD+ EG+I+R   RLDE   ++R A
Sbjct: 1173 -VPGEEF--RTLKPGLVEVVYEWAKGMPFEQITDLTDVAEGTIVRVITRLDETCREVRDA 1229

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+ +G+  L KK   A   ++R I+F+ SLY 
Sbjct: 1230 ARVIGDAELFKKMEEAQIKIKRDIVFAASLYF 1261


>gi|345325632|ref|XP_001513852.2| PREDICTED: superkiller viralicidic activity 2-like 2
           [Ornithorhynchus anatinus]
          Length = 755

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 236/504 (46%), Positives = 332/504 (65%), Gaps = 41/504 (8%)

Query: 275 FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
           FREDNF          +  G    G   GR  KGG+  G S++FKIVKMIMER FQPVI+
Sbjct: 6   FREDNFNTAMQVL---RDAGDLAKGDQKGR--KGGT-KGPSNVFKIVKMIMERNFQPVII 59

Query: 335 FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           FSFS+++CE +A+ M+KLDFNT EEK  VE+VF NA+DCL++ED+ LP +E +LPLLKRG
Sbjct: 60  FSFSKKDCEAYALQMTKLDFNTAEEKKMVEEVFNNAIDCLSDEDKKLPQVEHVLPLLKRG 119

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           I +HH GLLP++KE +E+LF EGL+KALFATETFAMG+NMPA+TV+FT+ +K+DG   R+
Sbjct: 120 IGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPARTVLFTSARKFDGKDFRW 179

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
           I SGEYIQMSGRAGRRG DDRGI I+MVDE+M     K ++ G   PL S F L+Y  +L
Sbjct: 180 ISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTVGKQLLKGSADPLNSAFHLTYNMVL 239

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL 574
           NL+ R E +   E++++ SF+QFQ+ +A+P + +KV  LE +   +    E  V  Y+K+
Sbjct: 240 NLL-RVE-EINPEYMLEKSFYQFQHYRAIPGVVEKVKNLEHQYHKIVIPNEESVVIYYKI 297

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK----KPSAG- 629
           +  +A+L K++   I +P+  L +L  GRL+KV+  G D+GWGVVVN  K    KP++G 
Sbjct: 298 RQQLAKLGKEIEEYIHKPKYCLPFLQPGRLVKVKSEGDDFGWGVVVNFSKKSNVKPNSGE 357

Query: 630 -----------------------VGTLPS----RGGGYIVPVQLPLISTLSKIRLSVPPD 662
                                      P+    +G   +VPV + L+S++S +RL +P D
Sbjct: 358 LDPLYVVEVLLHCSKESLKNSATEAAKPAKPDEKGEMQVVPVLVHLLSSISSVRLYIPKD 417

Query: 663 LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
           LRP+D RQS+L ++QE++ RFP G+P L+P+ DM I+D  +  ++ +IE  EH++++HPL
Sbjct: 418 LRPVDNRQSVLKSIQEVQKRFPDGVPLLDPIDDMGIKDQGLKKVIQKIEAFEHRMYSHPL 477

Query: 723 -NKSQDENQIRCFQRKAEVNHEIQ 745
            N S  E   +  +RKA+   E Q
Sbjct: 478 HNDSNLETVYKLCERKAQPAPERQ 501


>gi|388852132|emb|CCF54138.1| probable SKI2-antiviral protein and putative helicase [Ustilago
           hordei]
          Length = 1292

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 254/609 (41%), Positives = 359/609 (58%), Gaps = 61/609 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA ++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 315 QMAHSFPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIALAQKHMTRCIYTSP 374

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+  Q F   +VG++TGDV ++P A CL+MTTEILR MLYRG++++++V +
Sbjct: 375 IKALSNQKYRDFKQTFGAANVGILTGDVQINPEAPCLIMTTEILRSMLYRGADLIRDVEF 434

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D+ERGVVWEE II  P  I ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 435 VIFDEVHYVNDQERGVVWEEVIILCPQHINLILLSATVPNTKEFADWVGRTKKKDIYVIS 494

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------- 297
           T  RP PL+H+++   G  ++ +VD + QF     +K     LK+K    RE        
Sbjct: 495 TPKRPVPLEHFLY--AGKEMFKIVDARAQFLGSG-IKEAGEALKRKQEKEREANAAATGG 551

Query: 298 ---------------NGKASGRM--AKGGS--GSGGSD---------------------- 316
                          N +  G M  A+G +  G GG++                      
Sbjct: 552 GGAARGGRGGGAAGSNSRGRGGMVPARGAAPRGRGGANPGAGRGGFTGTTTVRTGLDKNL 611

Query: 317 IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNE 376
              +V  + ++   P +VF FS++ CE++A SM   D N  ++K  V  V + ++  L  
Sbjct: 612 WIHLVGNLRKKDLLPCVVFVFSKKRCEEYATSMPNTDLNAAKDKSEVHIVIEKSLTRLKG 671

Query: 377 EDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPA 436
            D+ LP I+ M  LL RGI VHH GLLP++KE+VELLFQ GLVK LFATETFAMG+NMPA
Sbjct: 672 TDKELPQIKRMRDLLSRGIGVHHGGLLPIVKEIVELLFQRGLVKVLFATETFAMGVNMPA 731

Query: 437 KTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMV 495
           ++VVF++++K DG   R +  GEY QMSGRAGRRG D  G+ II   +Q+ E   L  M+
Sbjct: 732 RSVVFSSIRKHDGHGFRELLPGEYTQMSGRAGRRGLDATGVVIINAADQLPETAVLHKML 791

Query: 496 LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
           LG+P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  KK  +LE+
Sbjct: 792 LGQPTKLQSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENAAQKMLPDQQKKAQELEK 849

Query: 556 EAASLDASGEAEVAE----YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGG 611
           + A        E+ E    Y+ L   +    + L       ++     G+GR++ +R+G 
Sbjct: 850 KLARAPRPQPQELDEQLSTYYDLCTAVVASNQSLFELALGHQQGAKNFGAGRVVVLRDGH 909

Query: 612 TDWGWGVVV 620
            D+    +V
Sbjct: 910 FDFDVAAIV 918



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 115/217 (52%), Gaps = 6/217 (2%)

Query: 742  HEIQQLKSKMRDSQIQKFR--DELKNRSRVLKKLGHID-ADGVVQLKGRAACLIDTGDEL 798
            H   QL++ +R S  +      +   R  VLK L +ID     V LKGR AC +++ +EL
Sbjct: 1079 HLTTQLEATLRLSSDENLELLPDYNQRVSVLKTLRYIDPVTESVLLKGRVACEVNSANEL 1138

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            ++TEL+      D +  ++ AL S FI  +K+ +   L   L +  +++ E A +++ +Q
Sbjct: 1139 VLTELILENVLVDYEPEELIALLSIFITQEKTDDIPILEGRLLQGYEKILEIAERVSTVQ 1198

Query: 859  NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
                L     E      +  L+ V+Y W+KG  FA +  MTDI EGSI+R   RLDE   
Sbjct: 1199 LSNHL---ASEDFSVPGKTALVGVVYEWAKGTDFASIAAMTDIQEGSIVRVITRLDETCR 1255

Query: 919  QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ++R AA+ +G+ +L +K       +RR I+F+ SLY 
Sbjct: 1256 EIRDAARVIGDRDLGEKIQTCQTLIRRDIVFAASLYF 1292


>gi|440297333|gb|ELP90027.1| helicase, putative [Entamoeba invadens IP1]
          Length = 1045

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 310/940 (32%), Positives = 509/940 (54%), Gaps = 96/940 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +M + YSFELD FQ+ ++  +E  + V V AHTSAGKTA AEYAIA+A     + IYTSP
Sbjct: 66  DMKRKYSFELDTFQKKAIYHMELGQHVFVIAHTSAGKTATAEYAIALAQSKGMKAIYTSP 125

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLS-PNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           +KALSNQKY +  + F  VG++TGDV +  P+    +MTTEILR  LY+ ++ + +V WV
Sbjct: 126 IKALSNQKYYDFRKIFGKVGIITGDVVIQQPDDLVTIMTTEILRSKLYQDAKFIDDVDWV 185

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE I+ LPP +KM+ LSAT+ NA  FAEWI    +Q   +V T
Sbjct: 186 IFDEVHYVNDEERGVVWEEVIMNLPPHVKMLMLSATVENAINFAEWIGRTKQQKVCLVKT 245

Query: 247 DFRPTPLQHYVFPVGGS------GLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK 300
             RP PLQHYVF  G S       LY+    +  F  +N+++     + + + G++    
Sbjct: 246 LHRPVPLQHYVF-CGKSKENKEDALYMFKKGEISFLNENYLEAYKRIVPKFMKGKK---- 300

Query: 301 ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK---LDFNTQ 357
                    +      + + ++ + +    P + F FSR+    +A  ++K    D N  
Sbjct: 301 ------MFDAVHDVKHLQQFIEFLDKDGKLPCVFFIFSRKLVMDYAKRLAKSTQFDINAY 354

Query: 358 EEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
           +    V+ +FQ   + L E ++NLP I+ +  LL RG+ VHH+GLLP +KE+VE+LF +G
Sbjct: 355 K----VQTLFQEMTEGLVESEKNLPQIKEVKALLLRGVGVHHAGLLPFLKEIVEVLFSQG 410

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           ++K LFATETFAMG+NMPAKTVVF +V+K+DG+  R++  GEY QMSGRAGRRG D  G 
Sbjct: 411 ILKVLFATETFAMGVNMPAKTVVFPSVEKFDGEKKRFLNPGEYTQMSGRAGRRGIDPIGN 470

Query: 478 CIIMVDEQMEMNT-LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
            I+  ++ +  +T ++++  G PA + S F ++Y+ +LN ++       +E +IK SF +
Sbjct: 471 VILFPNKVLPSSTQMQNISCGAPAKMKSQFYVTYWMLLNWLTSGSDD-VSEKMIK-SFSK 528

Query: 537 FQ-YEKA----LPDIGKKVSKLEEEAASL---DASGEAEVAEYHKLKLDIAQLEKKLMSE 588
              +E A    +    +KV + +EE A     +   EA +     +K +I ++ +K+  E
Sbjct: 529 IDLFEMANRALIAQEAQKVLEKDEEQAKCSNPNCDHEALIL----IKKEINEIRRKITEE 584

Query: 589 --ITRPERVLYYLGSGRLIKV-REGGTDWGWGVVVNVVKKPSAGVGTLP-SRGGGYIVPV 644
             I + +   ++  +GR++K  REG + +G      ++ K   G       +  G + P+
Sbjct: 585 VFIAKAQGGAHFYKTGRVVKFSREGQSFYGI-----ILDKVGEGFTVYYFDKTEGRVTPI 639

Query: 645 QLPLISTL----------------------SKIRLSVPPDLRPLDAR--QSILLAVQELE 680
            L  I T+                       KI+ ++   L  +  R  Q  L    + E
Sbjct: 640 NLRDIKTVYNKVLYVKGTENYTETTIELGDKKIKTALYDRLNSIITRKYQEPLFQPYQSE 699

Query: 681 SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEV 740
            + P        VK++  E  + V+++ ++      +F     +S   N+++       +
Sbjct: 700 KKRPMN------VKELFSEYTKNVEIMIKMPAFTCSVFKKFNKESGRRNKLQKLANDILL 753

Query: 741 NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD-GVVQLKGRAACLIDTGDELL 799
           N+E  ++   + D        +L+NR  VLK    ID +  ++ LKG+ A  + + D ++
Sbjct: 754 NYESNKM---VMDK-------DLENRLDVLKHFEFIDKETNILTLKGKVAKEMVSSDGMI 803

Query: 800 VTELMFNGTFNDLDHHQVAALASCFI--PVDKSSEQI--NLRMELAKPLQQLQESARKIA 855
           +T ++F+G  N ++ +Q+AAL S F+  P ++S E++  N + E  + +  L++ A +I 
Sbjct: 804 LTNMLFDGLLNKMEVYQLAALFSVFVFEPSNESMEELIGNFKPETNELIDLLEKYAMEIV 863

Query: 856 EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
           + +N   +E  +++YV+      LM+ +  W+    F EVI  +   EG I+R   R+++
Sbjct: 864 DYENTKNIEYTIEKYVKMNYG--LMEGVALWTLKKPFNEVIDASATTEGLIVRCILRIEQ 921

Query: 916 FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + ++  AA  +G   + KK A  +E L+R I+   SLYL
Sbjct: 922 VVEEVTRAAAIIGNEEMTKKCATLTELLKRDIVNVKSLYL 961


>gi|253742835|gb|EES99502.1| Helicase [Giardia intestinalis ATCC 50581]
          Length = 1358

 Score =  449 bits (1156), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 264/680 (38%), Positives = 371/680 (54%), Gaps = 100/680 (14%)

Query: 40  HEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAH 99
           H V  P GY + KD A       P    E+   + +ELDPFQR ++  L    SVLV+AH
Sbjct: 66  HSVVFPYGYDIPKDPADKIYTCEP--PAELPVKFPYELDPFQRRAIGALHIGHSVLVAAH 123

Query: 100 TSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF---KDVGLMTGDVTLS 156
           TSAGKT VAEY IA A    QRV+YT+P+KALSNQKY++L         VG+MTGD TL+
Sbjct: 124 TSAGKTTVAEYIIATALAQNQRVVYTTPIKALSNQKYQDLKLAAYTKGSVGIMTGDTTLN 183

Query: 157 PNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
             A  LVMTTEILR ML++G+E+L+E+ +VIFDE+HYM++ ERG+VWE+ I  L   I+ 
Sbjct: 184 RTAGVLVMTTEILRNMLHQGAELLREIGYVIFDEVHYMRNSERGLVWEDCIAMLSSNIQF 243

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD--EKEQ 274
            FLSAT+ NA++FA W+  LH  P HVVYT +RP PL H++ PVGG G+Y +    +K +
Sbjct: 244 CFLSATVPNASEFAGWVASLHSIPVHVVYTQYRPVPLMHFLCPVGGDGIYPICSSIDKNK 303

Query: 275 FREDNFVKLQDTFLK---QKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
            R D  +K +        Q +    E G +     K    +    + +++K ++ R   P
Sbjct: 304 IRHDQVIKAKANLPHDNAQAVARGEEEGTSGHSNKKQQQKAIRDTLHRVMKNLIARDCFP 363

Query: 332 VIVFSFSRRECEQHAMSMSKLDFN------------------------------------ 355
           +IVF+F +++CE +AM      F+                                    
Sbjct: 364 LIVFAFGKKKCEAYAMDFIGDYFSGGQRVATSQSPSQRTHGEEPQTLAPHNDQPSTQTQP 423

Query: 356 -------TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
                  T E+   ++ +F  A+ CL EEDRNL  + ++  +L+RGIAVHHSGLLP  KE
Sbjct: 424 PIVQSLVTPEQTRIIDNIFDAALKCLPEEDRNLRPVVVLRGMLRRGIAVHHSGLLPWAKE 483

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           ++E+LF EGLVK L+ATETFAMGLN+PA+ ++F+  KK+DG + R + +GEY+QM+GRAG
Sbjct: 484 IIEILFVEGLVKILYATETFAMGLNLPARAIIFSEFKKFDGLTSRLVTAGEYVQMAGRAG 543

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
           RRG D +G+ I M     E + +  ++ G   PL S +RLS+ S+L LM   +   + E 
Sbjct: 544 RRGIDKQGMSICMFSTADECDNIVKVIQGTTEPLNSAYRLSFNSVLKLMQIEDS--SPEQ 601

Query: 529 VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA-----------------SGEAE-VAE 570
           VIK SF QFQ    LP    K+  L E+A ++D                  S E E +A+
Sbjct: 602 VIKRSFLQFQQLFRLPRCLNKILSL-EDANTMDKAQLFALLLNIFSILQRLSKENEQLAQ 660

Query: 571 Y------HKLKL----DIAQLEKKLMSEITR-PERVLYY---------------LGSGRL 604
           +      H L++    DI +L   L   I     R  YY               L  GR+
Sbjct: 661 FFGQDMLHSLEMLAVGDIQRLYDLLTEYINLFALRASYYADRSRLLSQDSMKQLLIHGRI 720

Query: 605 IKVREGGTDWGWGVVVNVVK 624
           + V   G D GW  V+ V++
Sbjct: 721 VHVHADGLDMGWVPVLKVIR 740



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 116/236 (49%), Gaps = 12/236 (5%)

Query: 731  IRCFQRKAE---VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL--K 785
            + C +R A+       IQ+    +  S++ K ++ L     + +  G  D +    L  K
Sbjct: 1118 LNCMRRDAKKQIFKQYIQEADELILSSELIKLKNFLHREHFIEEIPGAADGEAAYLLTDK 1177

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA-LASCFIPVDKSSEQINLRMELAKPL 844
            GR AC + + +E+++ E +F   F DL    +A  LAS       +S+   L+M+  K  
Sbjct: 1178 GRVACHVSSANEVILVECLFEAQFTDLTPRVLAGVLASLLGEGTGASKSSQLQMD-PKLS 1236

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD----VIYCWSKGATFAEVIQMT- 899
            Q L +  + ++ +  +C +E    E   +TV   + D    + + W+ G TF E++ +  
Sbjct: 1237 QALSKLKQIVSNLLKDCAIEDTTLELRCTTVDHIVDDTAAVIAFSWAAGQTFQEILDIDR 1296

Query: 900  DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              FEGSI+R  RRL   ++QL  A + +G+  L+ +  A  +++ R I+  NSLY+
Sbjct: 1297 SQFEGSIVRMFRRLINLVDQLVIAVEVIGDDRLKARLTAVHDAIFRDIIKVNSLYV 1352


>gi|294899270|ref|XP_002776564.1| helicase with zinc finger protein motif, putative [Perkinsus marinus
            ATCC 50983]
 gi|239883606|gb|EER08380.1| helicase with zinc finger protein motif, putative [Perkinsus marinus
            ATCC 50983]
          Length = 1069

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 318/990 (32%), Positives = 486/990 (49%), Gaps = 134/990 (13%)

Query: 67   GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            G  A  + FELD FQ+ +V  + + +SV V+AHTSAGKTAVAEYAIA A +   R IYTS
Sbjct: 86   GPPAMEFPFELDDFQKRAVLRVSQGDSVFVAAHTSAGKTAVAEYAIADAIKQGGRAIYTS 145

Query: 127  PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
            P+KALSNQKYRE  Q+F  VG++TGDV+++P A+ ++MTTEILR MLYR  E L  +  V
Sbjct: 146  PIKALSNQKYREFTQKFDSVGVVTGDVSINPLANVVIMTTEILRTMLYRKDENLANIKTV 205

Query: 187  IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
            IFDE+H++ D +RGVVWEE II +P  + MV LSAT+ N  +FA+W+    ++  + V T
Sbjct: 206  IFDEVHFVNDPDRGVVWEECIILMPADVPMVMLSATVPNYREFADWVGRTKQRTVYTVST 265

Query: 247  DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF---------LKQKIGGRRE 297
             +RPTPL HY++       YL++D K  F    + K+ D            KQ +G  + 
Sbjct: 266  AYRPTPLCHYLW--WKDKPYLLMDNKGVFNTATYRKIYDEMRASEAPAPNTKQTVGKGKG 323

Query: 298  NGKASGRM-------AKGGSGSGGSDIF-------KIVKMIMERKFQPVIVFSFSRRECE 343
             GK  G+        A     +G S I         ++K +      P  VF FSR  CE
Sbjct: 324  KGKGKGKGKGVHRAPAPKQPLTGESKIRLETQKLQGMIKALETEDKLPATVFVFSRVRCE 383

Query: 344  QHAMSMSKLD-FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
            ++AM M  LD  +   E+  V    + +   L+E DR+LP I+ +  L  RGI VHH GL
Sbjct: 384  RYAMGMPHLDLLSGSAERSKVHVFLKESFSKLDESDRDLPQIQAVTDLALRGIGVHHGGL 443

Query: 403  LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
            LP++KE VE+LF  G +K LFATETFAMG+NMPA++V+F++++K DG   RY+   EY Q
Sbjct: 444  LPIVKEAVEILFSRGHIKVLFATETFAMGVNMPARSVIFSSIRKHDGSKFRYLLPTEYTQ 503

Query: 463  MSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
            MSGRAGRRG D  G   ++  E++ ++  L   +  K  PL S F+L++  +L +     
Sbjct: 504  MSGRAGRRGLDSVGNVYVLAAEELPDLKALTTTMTSKHTPLQSQFKLTFQMLLQMAKLT- 562

Query: 522  GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLD 577
              + AE ++  S+ +      LP   + + +L++    L       GE ++  Y KL+L 
Sbjct: 563  -HWKAEDLMSRSYLENARAMQLPTAKRDLQRLKKRQGDLPRLECVLGEEDMHRYAKLELK 621

Query: 578  IAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRG 637
               +  +L  ++   +    +   GRL+ V        W +    V  P+  +G  P   
Sbjct: 622  SRHMASELYGKLFNTDHKKVFC-RGRLVMV--------WSLPNIRVSSPAVILGASPPSM 672

Query: 638  GGYIVPVQLPLISTLSKIRLSVPPD-----------LRPLDARQSILLAVQELESRFPQG 686
               +    +  +  L  +R  VP             ++ L  +  +LL         P G
Sbjct: 673  STSV----MATVDVLVVLRRPVPDSTPAGDNGYTVRIKNLPVKSGLLLVTDHC---LPHG 725

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHK-LFAHPLNKSQDENQI-------------- 731
                       ++  +   L  ++   E    F  PL   ++  QI              
Sbjct: 726  -----------VDFSDAFGLARELRRCEEAGQFDEPLELGKNLKQIQTEYFDTLIGVKDL 774

Query: 732  ----------RCFQRK---------AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKK 772
                      RC  R+          E+ H+I+ L+ K+ DS +       K   RVL  
Sbjct: 775  TLTKMHSKCHRCHLRQEHFDLVVEEGEITHDIEDLEFKIDDSSLY-LASARKRMLRVLMD 833

Query: 773  LGHIDADGV-VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI------ 825
            L  +D + + + LKGRAA  +  GDEL +TEL+F     D D     AL  CF       
Sbjct: 834  LDELDKNTMQITLKGRAASELVLGDELTLTELLFCNELGDADVPSCVALVCCFACDSGVS 893

Query: 826  PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
             +   + ++ L  E  K L++  E   K+A++  + ++E +  E+ +  +   +  + + 
Sbjct: 894  QMSHEAAEVLLPPETVKLLERAMEMHGKVADVLTKERVETDWTEF-DKQLCLGIAPLAHA 952

Query: 886  WSKGATFAEVIQMTDIF--------------------EGSIIRSARRLDEFLNQLRAAAQ 925
            W++G  FAE++    I                     EG+++RS +R DE   +L  AA+
Sbjct: 953  WARGVPFAELMTAEPISSKDDEEVYYSLWKPGDKPLQEGAVVRSIQRCDELFRRLGKAAE 1012

Query: 926  AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +G   +  K     E++RR I+F+ SLYL
Sbjct: 1013 VMGSTEVVNKVEQCREAIRRDIVFALSLYL 1042


>gi|406695222|gb|EKC98533.1| hypothetical protein A1Q2_07129 [Trichosporon asahii var. asahii CBS
            8904]
          Length = 1201

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 322/982 (32%), Positives = 501/982 (51%), Gaps = 154/982 (15%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAE             IYTSP
Sbjct: 280  EMARQYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAE------------AIYTSP 327

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+  Q F    VG++TGDV ++P  SCL+MTTEILR MLY+G++++++V +
Sbjct: 328  IKALSNQKFRDFKQTFDPSTVGILTGDVQINPEGSCLIMTTEILRSMLYKGADLIRDVEF 387

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++  +V+ 
Sbjct: 388  VIFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKRKNIYVIS 447

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ--------------K 291
            T  RP PL+HY++   G  ++ +VD K QF    +    D   ++              +
Sbjct: 448  TPMRPVPLEHYLW--AGKEIHKIVDSKGQFLGSGYKSAGDALRRKQDKEREAAGLPPLTR 505

Query: 292  IGGR-------------------RENGKASGRMAKGGSGSGGS----------------- 315
             GGR                   R  G  S     GG G+                    
Sbjct: 506  TGGRGGAPVKARDLPTGRSAPFSRVGGGRSHTNRGGGQGAPAPANGGRGGGGGGRGGRGG 565

Query: 316  -----------DIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                       +++  ++  + +    PV+ F FS++ CE++A ++S  D    +EK  V
Sbjct: 566  GRPGGRGQLDQNVWTHLIAYLRKNHLLPVVNFVFSKKRCEEYAQTLSTTDLCDSKEKSEV 625

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               ++ A+  L                                KE+VE+LF  GLVK LF
Sbjct: 626  HVTWERALTRL--------------------------------KEVVEILFARGLVKVLF 653

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
            ATETFAMG+NMPAK+VVF+ ++K DG + R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 654  ATETFAMGVNMPAKSVVFSGIRKHDGTTFRNLLPGEYTQMAGRAGRRGLDTTGTVIILNG 713

Query: 483  -DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
             DE      L++M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K
Sbjct: 714  GDELPAQQELQEMMLGVPNRLTSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENAAQK 771

Query: 542  ALPDIGKKVSKLEEEAASLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEIT-RPERVLYYL 599
              P+  K++ K+  +  +++  + + ++  Y+ L  +I ++   +M++    P +   +L
Sbjct: 772  LAPEQQKQIEKILAKLPNVECPTCKPDIEAYYDLSAEIVRVNTSMMNQAAWAPGK---HL 828

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY--IVPVQLPLISTLSKIRL 657
              GR++ +R+    +   V + +   PS     + S    Y  ++      I+  SK  L
Sbjct: 829  VPGRIVLIRDA--RFPGNVAIILRNAPSVVREGVKSDARAYHVLILATKQQIADASKPEL 886

Query: 658  S-------VPPDLRPLDARQS--ILLAVQELESRF-PQGLPK--LNPVKDMKIEDP---- 701
                     PP L P  A+     L A++     F    L K  +N + D + ++P    
Sbjct: 887  KDSELAPRWPPVLSPSTAQNPRYWLTAIESSSIGFVTDRLLKVDVNGILDKRQKEPALKA 946

Query: 702  --EVVDLVNQIE---ELEHKLFAHPLNKSQDENQIRCFQRKAE-VNHEIQQLKSKMRDSQ 755
              E+V +   I    EL    +A  L+K + + Q+R     A+ V+    QL     +  
Sbjct: 947  MNELVKVQEDITSGGELNEVDWAR-LSKLEFQEQLRNRISLADRVSKLGCQLCKNFEEDN 1005

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            ++   D  ++R  VLK+L  ID +  V LKGR AC I++  EL++TEL+ +    D    
Sbjct: 1006 LELLPD-YESRVEVLKELSFIDENSTVLLKGRVACEINSAPELILTELILDNILADYTPE 1064

Query: 816  QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV--DEYVES 873
            +  AL S F+ V+K+     +   +A+ L    ++   IA+    C+L  NV  D++ E 
Sbjct: 1065 EAVALLSVFVFVEKTESVPEIPPRIAQGL----DTIYAIADNVENCQLRRNVVFDDFREK 1120

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
              +P L++V+Y W++G  F+E+  +TD+ EG+I+R   RLDE   ++R AA+ +G+  L 
Sbjct: 1121 -YKPGLVEVVYEWARGMPFSEITNLTDVPEGTIVRVITRLDETCREVRDAARVIGDAELF 1179

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
            +K   A   ++R I+F+ SLYL
Sbjct: 1180 QKMEEAQALIKRDIVFAASLYL 1201


>gi|401886988|gb|EJT50996.1| hypothetical protein A1Q1_07790 [Trichosporon asahii var. asahii CBS
            2479]
          Length = 1201

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 322/982 (32%), Positives = 501/982 (51%), Gaps = 154/982 (15%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            EMA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAE             IYTSP
Sbjct: 280  EMARQYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAE------------AIYTSP 327

Query: 128  LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
            +KALSNQK+R+  Q F    VG++TGDV ++P  SCL+MTTEILR MLY+G++++++V +
Sbjct: 328  IKALSNQKFRDFKQTFDPSTVGILTGDVQINPEGSCLIMTTEILRSMLYKGADLIRDVEF 387

Query: 186  VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
            VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++  +V+ 
Sbjct: 388  VIFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKRKNIYVIS 447

Query: 246  TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ--------------K 291
            T  RP PL+HY++   G  ++ +VD K QF    +    D   ++              +
Sbjct: 448  TPMRPVPLEHYLW--AGKEIHKIVDSKGQFLGSGYKSAGDALRRKQDKEREAAGLPPLTR 505

Query: 292  IGGR-------------------RENGKASGRMAKGGSGSGGS----------------- 315
             GGR                   R  G  S     GG G+                    
Sbjct: 506  TGGRGGAPVKARDLPTGRSAPFSRVGGGRSHTNRGGGQGAPAPANGGRGGGGGGRGGRGG 565

Query: 316  -----------DIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                       +++  ++  + +    PV+ F FS++ CE++A ++S  D    +EK  V
Sbjct: 566  GRPGGRGQLDQNVWTHLIAYLRKNHLLPVVNFVFSKKRCEEYAQTLSTTDLCDSKEKSEV 625

Query: 364  EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               ++ A+  L                                KE+VE+LF  GLVK LF
Sbjct: 626  HVTWERALTRL--------------------------------KEVVEILFARGLVKVLF 653

Query: 424  ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
            ATETFAMG+NMPAK+VVF+ ++K DG + R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 654  ATETFAMGVNMPAKSVVFSGIRKHDGTTFRNLLPGEYTQMAGRAGRRGLDTTGTVIILNG 713

Query: 483  -DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
             DE      L++M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K
Sbjct: 714  GDELPAQQELQEMMLGVPNRLTSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENAAQK 771

Query: 542  ALPDIGKKVSKLEEEAASLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEIT-RPERVLYYL 599
              P+  K++ K+  +  +++  + + ++  Y+ L  +I ++   +M++    P +   +L
Sbjct: 772  LAPEQQKQIEKILAKLPNVECPTCKPDIEAYYDLSAEIVRVNTSMMNQAAWAPGK---HL 828

Query: 600  GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY--IVPVQLPLISTLSKIRL 657
              GR++ +R+    +   V + +   PS     + S    Y  ++      I+  SK  L
Sbjct: 829  VPGRIVLIRDA--RFPGNVAIILRNAPSVVREGVKSDARAYHVLILATKQQIADASKPEL 886

Query: 658  S-------VPPDLRPLDARQS--ILLAVQELESRF-PQGLPK--LNPVKDMKIEDP---- 701
                     PP L P  A+     L A++     F    L K  +N + D + ++P    
Sbjct: 887  KDSELAPRWPPVLSPSTAQNPRYWLTAIESSSIGFVTDRLLKVDVNGILDKRQKEPALKA 946

Query: 702  --EVVDLVNQIE---ELEHKLFAHPLNKSQDENQIRCFQRKAE-VNHEIQQLKSKMRDSQ 755
              E+V +   I    EL    +A  L+K + + Q+R     A+ V+    QL     +  
Sbjct: 947  MNELVKVQEDITSGGELNEVDWAR-LSKLEFQEQLRNRISLADRVSKLGCQLCKNFEEDN 1005

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            ++   D  ++R  VLK+L  ID +  V LKGR AC I++  EL++TEL+ +    D    
Sbjct: 1006 LELLPD-YESRVEVLKELSFIDENSTVLLKGRVACEINSAPELILTELILDNILADYTPE 1064

Query: 816  QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV--DEYVES 873
            +  AL S F+ V+K+     +   +A+ L    ++   IA+    C+L  NV  D++ E 
Sbjct: 1065 EAVALLSVFVFVEKTESVPEIPPRIAQGL----DTIYAIADNVENCQLRRNVVFDDFREK 1120

Query: 874  TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
              +P L++V+Y W++G  F+E+  +TD+ EG+I+R   RLDE   ++R AA+ +G+  L 
Sbjct: 1121 -YKPGLVEVVYEWARGMPFSEITNLTDVPEGTIVRVITRLDETCREVRDAARVIGDAELF 1179

Query: 934  KKFAAASESLRRGIMFSNSLYL 955
            +K   A   ++R I+F+ SLYL
Sbjct: 1180 QKMEEAQALIKRDIVFAASLYL 1201


>gi|294945500|ref|XP_002784711.1| helicase with zinc finger protein motif, putative [Perkinsus marinus
            ATCC 50983]
 gi|239897896|gb|EER16507.1| helicase with zinc finger protein motif, putative [Perkinsus marinus
            ATCC 50983]
          Length = 1086

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 318/988 (32%), Positives = 486/988 (49%), Gaps = 136/988 (13%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + FELD FQ+ +V  + + +SV V+AHTSAGKTAVAEYAIA A +   R IYTSP+K
Sbjct: 107  AMEFPFELDDFQKRAVLRVSQGDSVFVAAHTSAGKTAVAEYAIADAIKQGGRAIYTSPIK 166

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYRE  Q+F  VG++TGDV+++P AS ++MTTEILR MLYR  E L  +  VIFD
Sbjct: 167  ALSNQKYREFTQKFDSVGVVTGDVSINPLASVVIMTTEILRTMLYRKDESLANIKTVIFD 226

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+H++ D +RGVVWEE II +P  + MV LSAT+ N  +FA+W+    ++  + V T +R
Sbjct: 227  EVHFVNDPDRGVVWEECIILMPADVPMVMLSATVPNYREFADWVGRTKQRTVYTVSTAYR 286

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF---------LKQKIGGRRENGK 300
            PTPL HY++       YL++D K  F    + K+ D            KQ +G  +  GK
Sbjct: 287  PTPLCHYLW--WKEKPYLLMDNKGVFNTATYRKIYDEMRASEAPAPNTKQTVGKGKGKGK 344

Query: 301  ASGRM-------AKGGSGSGGSDIF-------KIVKMIMERKFQPVIVFSFSRRECEQHA 346
              G+        A     +G S I         ++K +      P  VF FSR  CE++A
Sbjct: 345  GKGKGKGVHRAPAPKQPLTGESKIRLETQKLQGMIKALETEDKLPATVFVFSRVRCERYA 404

Query: 347  MSMSKLD-FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            M M  LD  +   E+  V    + +   L+E DR+LP I+ +  L  RGI VHH GLLP+
Sbjct: 405  MGMPHLDLLSGSAERSKVHVFLKESFSKLDESDRDLPQIQAVTDLALRGIGVHHGGLLPI 464

Query: 406  IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
            +KE VE+LF  G +K LFATETFAMG+NMPA++V+F++++K DG   RY+   EY QMSG
Sbjct: 465  VKEAVEILFSRGHIKVLFATETFAMGVNMPARSVIFSSIRKHDGSKFRYLLPTEYTQMSG 524

Query: 466  RAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
            RAGRRG D  G   ++  E++ ++  L   +  K  PL S F+L++  +L +       +
Sbjct: 525  RAGRRGLDSVGNVYVLAAEELPDLKALTTTMTSKHTPLQSQFKLTFQMLLQMAKLT--HW 582

Query: 525  TAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQ 580
             AE ++  S+ +      LP   + + +L++  A L       GE ++  Y KL+L    
Sbjct: 583  KAEDLMSRSYLENARAMQLPTAKRDLQRLKKRQADLPKLECVLGEEDMHRYAKLELKSRH 642

Query: 581  LEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY 640
            +   L  ++   +    +   GRL+ V        W +    V  P+  +   P      
Sbjct: 643  MTSDLYGKLFNTDHKKVFC-RGRLVMV--------WSLPNIRVSSPAVILEASPPSMSTS 693

Query: 641  IVPVQLPLISTLSKIRLSVPPD-----------LRPLDARQSILLAVQELESRFPQGLPK 689
            +    +  +  L  +R  VP             ++ L  +  +LL         P G   
Sbjct: 694  V----MATVDVLVVLRRPVPESSPAGDNGYTVRIKNLPVKSGLLLVTDHC---LPHG--- 743

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHK-LFAHPLNKSQDENQI----------------- 731
                    ++  +   L  ++   E    F  PL   ++  QI                 
Sbjct: 744  --------VDFSDAFGLARELRRCEEAGQFDEPLELGKNLKQIQTEYFDTLIGVKDLTMT 795

Query: 732  -------RCFQRK---------AEVNHEIQQLKSKMRDSQIQKFRDELKNRS-RVLKKLG 774
                   RC  R+          E+ H+I+ L+ K+ DS +  +    + R  RVL  L 
Sbjct: 796  KMHSKCHRCHLRQEHFDLVVEEGEITHDIEDLEFKIDDSSL--YLASARERMLRVLMDLD 853

Query: 775  HIDADGV-VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI------PV 827
             +D + + + LKGRAA  +  GDEL +TEL+F     D D     AL  CF        +
Sbjct: 854  ELDKNTMQITLKGRAASELVLGDELTLTELLFCNELGDADVPSCVALVCCFACDSGVSQM 913

Query: 828  DKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
               + ++ L  E  K L++  E   K+A++  + ++E +  E+ +  +   +  + + W+
Sbjct: 914  SHEAAEVLLPPETVKLLERAMEMHGKVADVLTKERVETDWTEF-DKQLCLGIAPLAHAWA 972

Query: 888  KGATFAEVIQMTDIF--------------------EGSIIRSARRLDEFLNQLRAAAQAV 927
            +G  FAE++    I                     EG+++RS +R DE   +L  AA+ +
Sbjct: 973  RGVPFAELMTAEPISSKDDEEVYYSLWKPGDKPLQEGAVVRSIQRCDELFRRLGKAAEVM 1032

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G   +  K     E++RR I+F+ SLYL
Sbjct: 1033 GSTEVVNKVEQCREAIRRDIVFALSLYL 1060


>gi|66817986|ref|XP_642686.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
 gi|60470819|gb|EAL68791.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
          Length = 1378

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/546 (44%), Positives = 352/546 (64%), Gaps = 33/546 (6%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           +A  + + I    ++ + N   A  Y F+LD FQ+ ++  +E+ ESV ++AHTSAGKT +
Sbjct: 407 WAFLEQKEITSPLSDLITNP--AIEYPFDLDSFQKQAIVHMEQGESVFITAHTSAGKTVI 464

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTE 167
           AEYAIAMA ++  R IYTSP+KALSNQK+R+    F DVGL+TGDV++SP++SCLV+TTE
Sbjct: 465 AEYAIAMAAKNMTRAIYTSPIKALSNQKFRDFKNTFNDVGLITGDVSISPSSSCLVLTTE 524

Query: 168 ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
           ILR MLY+G+++++++ WVIFDE+HY+ D ERGVVWEE II LPP +KMVFLSAT+SN  
Sbjct: 525 ILRSMLYKGADLIRDIEWVIFDEVHYLNDLERGVVWEEVIIMLPPYVKMVFLSATVSNPL 584

Query: 228 QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
           +FA+WI    + P +V+ T  RP PL+HY+     + L+ +VD    F    +    ++ 
Sbjct: 585 EFAQWIGRTKQLPIYVIGTTKRPIPLEHYIH-TPSNELFKIVDSNRNFLPSGYNSAYNSL 643

Query: 288 LKQKIGGRRENGKASGRMAKGGSG-------------SGGSDIFKIVKMIMERKFQPVIV 334
            K       +N K  G   +GG               SG S   K++  + +++  PVI+
Sbjct: 644 YKT------DNNKGGGGGGRGGHNQQQQQRGGSGNNISGWS---KLINTLKDKQQLPVII 694

Query: 335 FSFSRRECEQHAMSMSK-LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
           FSFS+ +C+++A S+ + ++     EK  +    + ++  L E+D++LP I  M  LL+R
Sbjct: 695 FSFSKNKCQEYAGSLGQSVNLTQGNEKSQIRVFIEQSLGRLCEDDKSLPQILQMKELLER 754

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           GI VHH GLLP++KELVE+LF + LVK LFATETFAMG+NMPAKTVV+++ +K DG + R
Sbjct: 755 GIGVHHGGLLPIVKELVEILFSKSLVKVLFATETFAMGVNMPAKTVVYSSTRKHDGITFR 814

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYS 512
            +  GEY QMSGRAGRRG D  G  II   + + E  T++ M+LG P+ L S FRL+Y  
Sbjct: 815 DLIPGEYTQMSGRAGRRGLDKVGTVIITYWKDIPEQATIESMILGTPSRLNSQFRLTYNM 874

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS----GEAEV 568
           ILNL+   +  F  E +IK SF +F  +K LP I K++ KL+++   L       GE ++
Sbjct: 875 ILNLLRVPD--FKVEDMIKRSFSEFSSQKELPGIEKQIEKLQQQQKQLAQVDCILGEPDI 932

Query: 569 AEYHKL 574
             Y+KL
Sbjct: 933 DHYYKL 938



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 160/279 (57%), Gaps = 6/279 (2%)

Query: 680  ESRFPQGLPKLNPVKDMKIEDPEVV---DLVNQIEELEHKLFAHPLNKSQDENQIRCFQR 736
            E   P G   ++P+K +K++D + V   D +  IE+L  +   H   +  D  +    ++
Sbjct: 1102 EYPLPLGPKSIDPIKQLKLKDVDFVSTYDHLQSIEKLIPESKCHKCPRLHDHYEQT--EK 1159

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            + ++ + I+  K    D  + K   +   R  +L +LG+ID +  V LKGR +  I+T +
Sbjct: 1160 RYQLQYAIRDAKYTASDENL-KLMPQFNIRLDILHELGYIDDENTVTLKGRVSREINTCE 1218

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            +L++TEL+F   F +L+  +V ++ SC I  +K + Q +L   L +  Q L ++A K  +
Sbjct: 1219 DLVITELIFENAFINLEPSEVVSVLSCLIFQEKDAVQPSLTPRLEEAKQNLIKTAEKTYK 1278

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            ++++  L+V  D+ +E+T++  LM V+Y W++G  F ++  +T++ EGSI+R+  R+ E 
Sbjct: 1279 VESDKGLDVVPDDKLETTLKFGLMQVVYEWARGTPFNDICTLTNVLEGSIVRAITRIGET 1338

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              ++R AA+ +G+  L +K   A   ++R I+F++SLY+
Sbjct: 1339 CQEVRNAARVIGDTKLLQKMEEAMRLIKRDIVFTSSLYV 1377


>gi|213408937|ref|XP_002175239.1| antiviral helicase SKI2 [Schizosaccharomyces japonicus yFS275]
 gi|212003286|gb|EEB08946.1| antiviral helicase SKI2 [Schizosaccharomyces japonicus yFS275]
          Length = 1189

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/521 (46%), Positives = 330/521 (63%), Gaps = 33/521 (6%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 242 EMAIEYPFELDNFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAQKHMTRAIYTSP 301

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+   +F+DVG++TGDV ++P+ASCL+MTTEILR MLYRGS+++++V +VI
Sbjct: 302 IKALSNQKFRDFKTKFEDVGILTGDVQVNPDASCLIMTTEILRSMLYRGSDLIRDVEFVI 361

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 362 FDEVHYVNDLERGVVWEEVIIMLPAHVTLILLSATVPNTKEFASWVGRTKKKNIYVISTS 421

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--QKI---GGRRENGKAS 302
            RP PL+HY++      +Y +VD+  +F  D + K     LK  +K+     + +NG   
Sbjct: 422 KRPVPLEHYLYV--NQNMYKIVDQNNRFLSDGY-KEASLALKGPEKVIPPAQKNQNGTRG 478

Query: 303 ---------------------GR-MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
                                GR   + G     +    +V  + ++   PVIVF FS++
Sbjct: 479 RGNPRGRGNQRGRGSQVNLMRGRGNVRAGERRDVNVWVHLVGHLQKQNLLPVIVFVFSKK 538

Query: 341 ECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
            CE++  +++    NTQ+EK  V  V + A+  L +EDRNLP I  M  +L RG+AVHH 
Sbjct: 539 RCEEYVDTLANRTLNTQKEKSEVHIVIEKAIARLKKEDRNLPQIGRMRDMLSRGLAVHHG 598

Query: 401 GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
           GLLP++KE+VELLFQ GLVK LFATETFAMG+NMPAK+VVF+  +K DG S R +  GEY
Sbjct: 599 GLLPIVKEIVELLFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGRSFRDLLPGEY 658

Query: 461 IQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
            Q SGRAGRRG D  G  II+V   + +  +L  M+LG P  LVS FRL+Y  +LNL+ R
Sbjct: 659 TQCSGRAGRRGLDSTGTVIILVRSDIPDTASLHHMILGTPTKLVSQFRLTYNMVLNLL-R 717

Query: 520 AEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL 560
            E     E +IK SF +   +  LP   K++   E++  ++
Sbjct: 718 VE-TLRIEDMIKRSFSENASQMLLPQHEKEIVSFEDKLETI 757



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 129/224 (57%), Gaps = 3/224 (1%)

Query: 733  CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
            C+Q + ++N  I+ L+ ++ D  ++   D  + R RVL++LG+ID+   VQLKGR AC I
Sbjct: 968  CYQ-EHQLNVTIENLRLQISDQNLELLPD-YEQRIRVLEELGYIDSKRTVQLKGRVACEI 1025

Query: 793  DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            ++ +EL++TEL+   T  +    ++ AL S F+  +K+  +  +   LAK    +   A 
Sbjct: 1026 NSANELILTELILENTLAEFTCEEIVALLSAFVFSEKTEVEPTISAHLAKGKAMILSVAD 1085

Query: 853  KIAEIQNECK-LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            ++  IQ + + L  N     ES  R  LM+V Y W++G +F  +  +TD+ EGSI+R+  
Sbjct: 1086 RVNSIQEKHQVLYFNEGNDFESQPRFGLMEVCYEWARGMSFQRITDLTDVLEGSIVRTII 1145

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDE L + R AA+ VG+ ++  K       +RR I+F  SLY+
Sbjct: 1146 RLDEVLRECRGAARVVGDASMYAKMEECQNLIRRNIVFCPSLYM 1189


>gi|443896240|dbj|GAC73584.1| cytoplasmic exosomal RNA helicase SKI2 [Pseudozyma antarctica T-34]
          Length = 1284

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 250/609 (41%), Positives = 356/609 (58%), Gaps = 58/609 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 318 QMAHAFPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIALAQKHMTRCIYTSP 377

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+  Q F   +VG++TGDV ++P A CL+MTTEILR MLYRG++++++V +
Sbjct: 378 IKALSNQKYRDFKQTFGAANVGILTGDVQINPEAPCLIMTTEILRSMLYRGADLIRDVEF 437

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D+ERGVVWEE II  P  I ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 438 VIFDEVHYVNDQERGVVWEEVIILCPQHINLILLSATVPNTKEFADWVGRTKKKDIYVIS 497

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------- 297
           T  RP PL+H+++   G  ++ VVD + QF     +K     LK+K    RE        
Sbjct: 498 TPKRPVPLEHFLY--AGKEMFKVVDARAQFLGTG-IKDAGEALKRKQEKDREAIAAAGGG 554

Query: 298 ---------NGKASGRMAKGG-----------------------------SGSGGSDIFK 319
                       ++ R  +GG                             +G   +    
Sbjct: 555 AARGGRGGGAAGSNSRGNRGGMTPARGAAGRGRGGAGGGRGGFPSTTTVRTGLDKNLWIH 614

Query: 320 IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
           +V  + ++   P +VF FS++ CE++A SM   D NT +++  V  V + ++  L   D+
Sbjct: 615 LVGQLRKKDLLPCVVFVFSKKRCEEYATSMPNTDLNTAKDRSEVHIVIEKSLTRLKGSDK 674

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
            LP I+ M  LL RGI VHH GLLP++KE+VELLFQ GLVK LFATETFAMG+NMPA++V
Sbjct: 675 ELPQIKRMRDLLGRGIGVHHGGLLPIVKEIVELLFQRGLVKVLFATETFAMGVNMPARSV 734

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGK 498
           VF++++K DG   R +  GEY QMSGRAGRRG D  G+ II   +Q+ E   L  M+LG+
Sbjct: 735 VFSSIRKHDGHGFRELLPGEYTQMSGRAGRRGLDPTGVVIINAADQLPETAVLHKMLLGQ 794

Query: 499 PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
           P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  +K  +LE + +
Sbjct: 795 PTKLQSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENAAQKMLPDQQRKAQELERQLS 852

Query: 559 SLDASG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDW 614
            L        +A++A Y+ L   +    + L       ++      +GR++ +R+   D+
Sbjct: 853 RLPHPQPEELDAQLATYYDLCAAVVASNQSLFELALGHQQGAKNFAAGRVVVLRDAHFDF 912

Query: 615 GWGVVVNVV 623
               VV  V
Sbjct: 913 DVAAVVRQV 921



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 4/191 (2%)

Query: 766  RSRVLKKLGHID-ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
            R  VLK L +ID     V LKGR AC +++ +EL++TEL+      + +  ++ AL S F
Sbjct: 1097 RVNVLKTLRYIDPVTESVLLKGRVACEVNSANELVLTELILENVLVEYEPEELVALLSIF 1156

Query: 825  IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
            +  +K+ +   L   LA+  +Q+   A +++ +Q    L  + D  V S +   L++V+Y
Sbjct: 1157 VAQEKTDDIPELPPRLAQGYEQIIGVAERVSAVQLSNSL-ASEDFTVPSKIA--LVNVVY 1213

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W+KG  FA +  MTDI EGSI+R   RLDE   ++R AA+ +G+ +L  K  AA   +R
Sbjct: 1214 EWAKGTDFATIAAMTDIQEGSIVRVITRLDETCREIRDAARVIGDRDLGDKIQAAQARIR 1273

Query: 945  RGIMFSNSLYL 955
            R I+F+ SLY 
Sbjct: 1274 RDIVFAASLYF 1284


>gi|71003748|ref|XP_756540.1| hypothetical protein UM00393.1 [Ustilago maydis 521]
 gi|46095704|gb|EAK80937.1| hypothetical protein UM00393.1 [Ustilago maydis 521]
          Length = 1301

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 246/611 (40%), Positives = 354/611 (57%), Gaps = 59/611 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA ++ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 325 QMAHSFPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIALAQKHMTRCIYTSP 384

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+  Q F   +VG++TGDV ++P A CL+MTTEILR MLYRG++++++V +
Sbjct: 385 IKALSNQKYRDFKQTFGAANVGILTGDVQINPEAPCLIMTTEILRSMLYRGADLIRDVEF 444

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D+ERGVVWEE II  P  I ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 445 VIFDEVHYVNDQERGVVWEEVIILCPQHINLILLSATVPNTKEFADWVGRTKKKDIYVIS 504

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN------- 298
           T  RP PL+H+++   G  ++ +VD + QF      +  +   +++   R  N       
Sbjct: 505 TPKRPVPLEHFLY--AGKEMFKIVDARAQFLGSGLKEAGEALKRKQEKEREANAAATGGG 562

Query: 299 -----------GKASGRMAKGG------------------------------SGSGGSDI 317
                         S    +GG                              +G   +  
Sbjct: 563 GGAARGGRGGGAAGSNSRGRGGMTPARGAAPRGRGGAAGGRGGGFPGTTTVRTGLDKNLW 622

Query: 318 FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V  + +++  P +VF FS++ CE++A SM   D NT ++K  V  + + ++  L   
Sbjct: 623 IHLVGHLRKKELLPCVVFVFSKKRCEEYATSMPNTDLNTAKDKSEVHILIEKSLTRLKGT 682

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           D+ LP I+ M  LL RGI VHH GLLP++KE+VELLFQ GLVK LFATETFAMG+NMPA+
Sbjct: 683 DKELPQIKRMRDLLGRGIGVHHGGLLPIVKEIVELLFQRGLVKVLFATETFAMGVNMPAR 742

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVL 496
           +VVF++++K DG   R +  GEY QMSGRAGRRG D  G+ II   +Q+ E   L   +L
Sbjct: 743 SVVFSSIRKHDGHGFRELLPGEYTQMSGRAGRRGLDATGVVIINAADQLPETAVLHKTLL 802

Query: 497 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
           G+P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  KK  +LE++
Sbjct: 803 GQPTKLSSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENAAQKMLPDQQKKAQELEKK 860

Query: 557 AASLDASGEAEVAE----YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
            A        E+ E    Y+ L   +    + L       ++     G+GR++ +R+G  
Sbjct: 861 LAKAQHPQPPELDEQMSTYYDLCAAVVASNQSLFELALGHQQGAKNFGAGRVVILRDGHF 920

Query: 613 DWGWGVVVNVV 623
           D+    +V  V
Sbjct: 921 DFDIAAIVRQV 931



 Score =  109 bits (273), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 108/191 (56%), Gaps = 4/191 (2%)

Query: 766  RSRVLKKLGHIDA-DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
            R  VLK L +ID     V LKGR AC +++ +EL++TEL+      + +  Q+ AL S F
Sbjct: 1114 RVSVLKTLRYIDPITESVLLKGRVACEVNSANELVLTELILENVLVEYEPEQLVALLSIF 1173

Query: 825  IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIY 884
            +  +K+ +   L  ++ +  Q++ E A +++ IQ    L     E   +  +  L+ V+Y
Sbjct: 1174 LTQEKTDDIPVLEGKILEGYQKILEIAERVSAIQLSNSL---ASEDFTAPNKIALVPVVY 1230

Query: 885  CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
             W+KG  FA +  MTDI EGSI+R   RLDE   ++R AA+ +G+ +L +K  +    +R
Sbjct: 1231 EWAKGTDFATIAAMTDIQEGSIVRVITRLDETCREIRDAARVIGDRDLGEKIQSCQTLIR 1290

Query: 945  RGIMFSNSLYL 955
            R I+F+ SLY 
Sbjct: 1291 RDIVFAASLYF 1301


>gi|397642913|gb|EJK75536.1| hypothetical protein THAOC_02740 [Thalassiosira oceanica]
          Length = 1428

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 253/607 (41%), Positives = 347/607 (57%), Gaps = 50/607 (8%)

Query: 20  TGTPEEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDP 79
           TGTP   S  K+           AV     LT     H    NP      A T+ FELD 
Sbjct: 361 TGTPIHPSLPKKDPKNDKSRKSWAVTDYIPLTSTNDFHTMLPNP------ALTFPFELDD 414

Query: 80  FQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYREL 139
           FQ+ +V  LER+E V ++AHTSAGKT  AEYAIA+A +   R IYTSP+KALSNQKYR+ 
Sbjct: 415 FQKQAVLRLERSECVFLAAHTSAGKTVSAEYAIALAMKHCTRAIYTSPIKALSNQKYRDF 474

Query: 140 HQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRE 198
             +F  DVGL+TGD+ +  + SCL+MTTEILR MLYRG+++++++ WVIFDE+HY+ D E
Sbjct: 475 KSKFGDDVGLITGDMQIGADGSCLIMTTEILRSMLYRGADLIRDIEWVIFDEVHYINDSE 534

Query: 199 RGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVF 258
           RGVVWEE II LP  + ++FLSAT  N  +F+EWI    ++P HV+ T++RP PL H ++
Sbjct: 535 RGVVWEEVIIMLPEYVNLIFLSATTPNTIEFSEWIGRTKRKPVHVIRTNYRPVPLSHNLW 594

Query: 259 PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK-----------ASGRMAK 307
              G  L+ +++ K  F    +       L       RE  +           ASG+   
Sbjct: 595 --AGGKLHKILEGKGAFDTKGYTAAAHALLP---ASAREAAEMGKKGEKKKTTASGKTIP 649

Query: 308 GGSGSGGS------------DIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
               S GS            D   +V+ +      P + FSFS+R+CE+ A S+  LD N
Sbjct: 650 ASKPSSGSRHSSWQQQGSKQDWIALVRFLEREGLMPTVTFSFSKRKCEELADSLRSLDLN 709

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
           TQ+EK+ V+      V+ L+ +D+ LP +   + ++KRGIAVHH GLLP++KE+VE+LF 
Sbjct: 710 TQQEKNAVQSFAIQTVNRLSPQDKILPQVIKTVEMVKRGIAVHHGGLLPILKEMVEILFS 769

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           + L+K LFATETFAMG+NMPA+ VVF  ++K DG   R +  GEY QM+GRAGRRG D  
Sbjct: 770 KNLIKILFATETFAMGVNMPARCVVFNTIRKHDGVQFRELQPGEYTQMAGRAGRRGLDKV 829

Query: 476 GICIIMV--DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
           G  I+    D+      L++M+ G    L S FRL+Y  ILNL+ R E   + E +IK S
Sbjct: 830 GTVILCCFGDQPPPQLVLRNMLTGSSTKLSSQFRLTYTMILNLL-RVE-DMSVESMIKRS 887

Query: 534 FHQF---------QYEKALPDIGKKVSKLEEEAASLDAS--GEAEVAEYHKLKLDIAQLE 582
           F +F         +Y K L    K + KL+EE      S  G  +V  Y+    +  Q  
Sbjct: 888 FSEFATQRALTTNEYPKLLTKGTKTLIKLDEEFKGTADSRVGAEDVEGYYFASKNALQSN 947

Query: 583 KKLMSEI 589
           K+L+S I
Sbjct: 948 KELLSYI 954



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 134/230 (58%), Gaps = 3/230 (1%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            E+      RK  +  +++ L   + +  +Q F D L+ R  +L+ LG+ID +  V LKGR
Sbjct: 1199 EHHYMAVDRKETLRAKVKTLSHLLSNESLQLFPDFLQ-RKAMLQSLGYIDENDTVCLKGR 1257

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQ 845
             AC ++T + L+V E++F G  N+L+  ++ A  S  +  +K  E+++  L   L    +
Sbjct: 1258 CACEVNTCEGLIVAEMVFEGMLNELEPAEIVASLSALLFQEKVDEELSKELPERLVSSCE 1317

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            ++Q  A  + + Q +  L V+  EY  ++++  L+ V+Y W+ G  FA + ++T + EGS
Sbjct: 1318 RMQAIALDLGQRQKDFGLSVDPLEYTANSLKLGLVHVVYEWACGVPFASICELTGVQEGS 1377

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            I+R+  RLDE   ++R  A+ VG   L +K  A+SE+++R I+F++SLY+
Sbjct: 1378 IVRTITRLDELCREVRNCARVVGNPTLYRKMEASSEAIKRDIVFASSLYV 1427


>gi|123399499|ref|XP_001301484.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
 gi|121882670|gb|EAX88554.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
          Length = 963

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 238/516 (46%), Positives = 327/516 (63%), Gaps = 23/516 (4%)

Query: 27  STKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPV-YNGEMAKTYSFELDPFQRVSV 85
           +T +Q +   + +H VA+P G           T  +PV +  E    Y FELD FQ+ +V
Sbjct: 16  TTFQQSSEGDNVLHYVALPDG----------KTSIDPVDFPKEPLLQYDFELDEFQKTAV 65

Query: 86  ACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD 145
           AC+ RNESVLVSAHTSAGKTA+A YAI  A     RVIYTSP+KALSNQKYREL ++F +
Sbjct: 66  ACVHRNESVLVSAHTSAGKTAIALYAIQSAINSNSRVIYTSPIKALSNQKYRELKEQFGE 125

Query: 146 VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEE 205
           VGL+TGDVT++ +A  LVMTTEILR MLYRG  ++ E++WVI+DEIHYMKD ERGVVWEE
Sbjct: 126 VGLITGDVTVNSSAPILVMTTEILRMMLYRGDSLIHELSWVIYDEIHYMKDPERGVVWEE 185

Query: 206 SIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGL 265
           SII LP ++  VFLSAT+ NA +F+EWI  +H QPCHVVYT+ RPTPL+ Y+   G    
Sbjct: 186 SIIMLPDSVHFVFLSATIPNAREFSEWISSIHHQPCHVVYTNHRPTPLKFYISSNGSEAP 245

Query: 266 YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE--NGKASGRMAKGGSG-----SGGSDIF 318
            L+   KE     + V +   + K K    +    G +  ++  G S      +      
Sbjct: 246 ALI---KEGEGPLDTVAVHTAYSKVKPEEDKSIYKGISVTKLNSGESKPVSRQTTDKLCA 302

Query: 319 KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEED 378
           +    ++     P+IVF+F R+ C+    +++   F TQEE + + Q+   A++ L + +
Sbjct: 303 ETAAWLVTHDQAPLIVFAFGRKLCDDLPTNLNGKSFVTQEESEQINQMIDVAIEKLEDSE 362

Query: 379 RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
           + LP I+ M  LL RGI VHH GL+P++KEL+ELLFQ GL+K LFATETFAMGLNMPA++
Sbjct: 363 KELPQIQTMRNLLVRGIGVHHGGLIPLLKELIELLFQYGLLKILFATETFAMGLNMPARS 422

Query: 439 VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGK 498
           V+F ++ K+DGD  R + S E+IQMSGRAGRR  D  G  I+    + +     D++ G 
Sbjct: 423 VLFHSLFKFDGDKRRLLTSSEFIQMSGRAGRRNNDRFGNVILTCTGEPQERPFCDLLTGI 482

Query: 499 PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
             PL S F ++Y+ +L+L++        E ++K SF
Sbjct: 483 AQPLNSEFHVTYHMLLSLLTSR--MMAPELLMKRSF 516



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 146/259 (56%), Gaps = 21/259 (8%)

Query: 706 LVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM---RDSQIQK--FR 760
           L +Q+E+L   L   P  ++  +  I+ +++K     ++Q+L SKM   R + ++K   +
Sbjct: 717 LNSQLEKLNELL---PKLQNVPKEDIQLYRKK----QDLQEL-SKMAAERCNYLKKAVMQ 768

Query: 761 DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            +L+    +++KLG +D++G++  KGR A +I  GDEL++TEL+F+G  N+L   Q+A+L
Sbjct: 769 RDLQEMKLIIEKLGFVDSEGIITDKGRVASVITAGDELVMTELLFSGLLNELTSQQIASL 828

Query: 821 ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-- 878
              F   + + ++  +  E+  P ++L++   ++  +  EC      +E  E  +  F  
Sbjct: 829 MCSFATDEGAKDEPEIPDEMKMPWEKLKDICERVYNVMLEC----GRNEPKEKWMGKFDG 884

Query: 879 -LMDVIYCWSKGATFAEVIQMT-DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
             + + + W+ GA+F E+++   D FEG +IR+ +R +E L Q + AA  +G   LE K 
Sbjct: 885 TYVSLTFNWAAGASFKEIMEENPDTFEGGVIRTMKRTEEILRQAQRAAAVMGSPELELKI 944

Query: 937 AAASESLRRGIMFSNSLYL 955
             A   ++R I+F+ SLYL
Sbjct: 945 LDAITKIKRDIVFAASLYL 963


>gi|413935661|gb|AFW70212.1| hypothetical protein ZEAMMB73_307219 [Zea mays]
          Length = 1373

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/619 (41%), Positives = 368/619 (59%), Gaps = 54/619 (8%)

Query: 53  DEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAI 112
           DE I   F+  V   +MA  + FELD FQ+ ++  LE+ ESV V+AHTSAGKT VAEYA 
Sbjct: 364 DEDIVTNFSKLV--PDMAIEFPFELDKFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAF 421

Query: 113 AMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGM 172
           A+A +   R +YT+P+K +SNQKYR+   +F DVGL+TGDV++ P A+CL+MTTEILR M
Sbjct: 422 ALATKHCTRSVYTAPIKTISNQKYRDFSGKF-DVGLLTGDVSIRPEATCLIMTTEILRSM 480

Query: 173 LYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEW 232
           LYRG+++++++ WVIFDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+W
Sbjct: 481 LYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFADW 540

Query: 233 ICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI 292
           I    ++   V  T+ RP PL+H +F    SG    + E++ F    F + +D F K+ +
Sbjct: 541 IGRTKQKKIRVTSTNKRPVPLEHCLF---YSGEVYKICERDMFLAQGFKEAKDAFKKKNL 597

Query: 293 G--------------------GRRENGKASGRMAK------GGSG-------SGGSDIFK 319
                                G+  +    GR  K        SG       S G   F+
Sbjct: 598 NKFGVKPGSKSGTPAVRAGTQGKNPDTSNKGRDQKYPKHRNSNSGVATVQQSSSGPKRFE 657

Query: 320 ------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                 +V  ++++   PV++F FS+  C++ A SM   D  +  EK  +      A   
Sbjct: 658 SLFWMPLVNNLLKKSLVPVVIFCFSKNRCDKSADSMFGTDLTSSSEKSEIRVFCDKAFSR 717

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L   DRNLP +  +  LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N
Sbjct: 718 LKGSDRNLPQVVGIQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 777

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLK 492
            PA+TVVF +++K+DG  HR +  GEYIQM+GRAGRRG D+ G  IIM  DE  E + LK
Sbjct: 778 APARTVVFDSLRKFDGKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIIMCRDEIPEESDLK 837

Query: 493 DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
           ++++GKP  L S FRL+Y  IL+L+ R E +   E ++K SF +F  +K LP+  K + +
Sbjct: 838 NLIVGKPTRLESQFRLTYTMILHLL-RVE-ELKVEDMLKRSFAEFHAQKNLPEKEKLLLQ 895

Query: 553 -LEEEAASLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-E 609
            L +   +++   GE  + EY+++ LD     + +   I +      +L  GRL+ V+ +
Sbjct: 896 MLRQPTRTIECIKGEPSIEEYYEMTLDAEAHREYITEAIMQLPNSQQFLTPGRLVVVKSD 955

Query: 610 GGTDWGWGVVVNVVKKPSA 628
              D   GV   ++K PSA
Sbjct: 956 SDDDHLLGV---ILKNPSA 971



 Score =  160 bits (404), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 168/285 (58%), Gaps = 5/285 (1%)

Query: 675  AVQELESRFPQGL---PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQ 730
             VQ+L    P G    P L+ +KD+K++D  +V+       L  K+  +  +   + +  
Sbjct: 1087 TVQQLIKEQPDGTKYPPALDAIKDLKMKDMYLVESYRAYHILLQKMSENKCHGCIKLKEH 1146

Query: 731  IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
            I   + +     ++ +LK +M D  +Q+   E + R  VLK + +ID+D VVQLKGR AC
Sbjct: 1147 ISLMREQKMYKDQLNELKFQMSDEALQQM-PEFQGRIDVLKVIHYIDSDLVVQLKGRVAC 1205

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             +++G+EL+ TE +F    +DL+  +  A+ S F+   +++ + +L  +LA+  ++L ++
Sbjct: 1206 EMNSGEELISTECLFENQLDDLEPEEAVAIMSAFVFQQRNASEPSLTPKLAEAKKRLYDT 1265

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            A K+ ++Q+E K+ V+ +EY    ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+ 
Sbjct: 1266 AIKLGKLQSEFKVPVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVSEGIIVRTI 1325

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             RLDE   + R AA  +G   L KK   AS +++R I+F+ SLY+
Sbjct: 1326 VRLDETCREFRNAASIMGNSALFKKMEVASNAIKRDIVFAASLYV 1370


>gi|357138765|ref|XP_003570958.1| PREDICTED: uncharacterized helicase C550.03c-like [Brachypodium
           distachyon]
          Length = 1274

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 254/621 (40%), Positives = 369/621 (59%), Gaps = 54/621 (8%)

Query: 53  DEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAI 112
           DE I   F    +  +MA  + FELD FQ+ ++  LE+ ESV V+AHTSAGKT VAEYA 
Sbjct: 263 DEDIATNFHR--FVPDMAIEFPFELDKFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAF 320

Query: 113 AMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGM 172
           A+A +   R +YT+P+K +SNQKYR+   +F DVGL+TGDV++ P A+CL+MTTEILR M
Sbjct: 321 ALATKHCTRAVYTAPIKTISNQKYRDFCGKF-DVGLLTGDVSIRPEATCLIMTTEILRSM 379

Query: 173 LYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEW 232
           LYRG+++++++ WVIFDE+HY+ D ERGVVWEE II LP  I +V LSAT+ NA +FAEW
Sbjct: 380 LYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNAVEFAEW 439

Query: 233 ICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL---K 289
           I    ++   V  T+ RP PL+H +F    SG    V EK+ F    F + +DTF     
Sbjct: 440 IGRTKQKKIRVTSTNKRPVPLEHCLF---YSGETYKVCEKDMFLTQGFREAKDTFKMKNS 496

Query: 290 QKIG-----------------GRRENGKASGRMAKGG----SGSGGSDI----------- 317
            K+G                 GR  +  + G+  K      + SG + I           
Sbjct: 497 NKLGVKPGSKSGTPATRPGTQGRNPDTSSRGKDQKHPKHHHTNSGAAAIQQSSSGSKRSE 556

Query: 318 ----FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                 ++  ++++   PV++F FS+  C++ A SM   D  +  +K  +      A   
Sbjct: 557 SSFWMPLINNLLKKSLVPVVIFCFSKNRCDRSADSMFGADLTSNSDKSEIRVFCDKAFSR 616

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L   DRNLP +  +  LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N
Sbjct: 617 LKGSDRNLPQVVGIQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVN 676

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLK 492
            PA+TVVF +++K+DG  HR +  GEYIQM+GRAGRRG D  G  +IM  DE  E + LK
Sbjct: 677 APARTVVFDSLRKFDGKEHRKLLPGEYIQMAGRAGRRGLDTIGTVMIMCRDEIPEESDLK 736

Query: 493 DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
           ++++GKP  L S FRL+Y  IL+L+ R E +   E ++K SF +F  +K LP+  + + +
Sbjct: 737 NLIVGKPTRLESQFRLTYTMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKEELLLQ 794

Query: 553 -LEEEAASLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-E 609
            L +   +++   GE  + EY+ + L+  +L + +   I +      +LG GRL+ V  +
Sbjct: 795 MLRQPTKTIECIKGEPSIEEYYDMFLEAEKLREYITEAIMQLPASQQFLGPGRLVVVESK 854

Query: 610 GGTDWGWGVVVNVVKKPSAGV 630
              D   GV   +VK PS  +
Sbjct: 855 SDDDHLLGV---IVKNPSGSL 872



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 169/285 (59%), Gaps = 5/285 (1%)

Query: 672  ILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI 731
            +L+  Q    ++P   P L+P+KD+K++D + V   +    L  K+  +  +      + 
Sbjct: 991  LLIKAQPDGHKYP---PALDPIKDLKMKDMDQVQKYHAYNRLLEKMSENKCHGCIKLKEH 1047

Query: 732  RCFQRKAEV-NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
            +   ++ +V   ++ +LK +M D  +Q+   + + R  VLK++ ++D+D VVQLKGR AC
Sbjct: 1048 KSLMKEQKVYKTQMDELKYQMSDEALQQM-PQFQGRIDVLKEIQYVDSDLVVQLKGRVAC 1106

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
             +++G+EL+ TE +F    +DL+  +  A+ S F+   +++ + +L  +LA   ++L ++
Sbjct: 1107 EMNSGEELISTECLFENQLDDLEPEEAVAIMSAFVFQQRNASEPSLTPKLADAKKRLYDT 1166

Query: 851  ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            A ++ ++Q   ++ V+ +EY    ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+ 
Sbjct: 1167 AIRLGQLQKHHEVPVDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVSEGLIVRTI 1226

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             RLDE   + R AA  +G   L KK   AS +++R I+FS SLY+
Sbjct: 1227 VRLDETCREFRNAASIMGNSALFKKMEIASNAIKRDIVFSASLYV 1271


>gi|222622217|gb|EEE56349.1| hypothetical protein OsJ_05464 [Oryza sativa Japonica Group]
          Length = 1452

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 248/606 (40%), Positives = 363/606 (59%), Gaps = 52/606 (8%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            +MA  Y FELD FQ+ ++  L++ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 455  DMAIEYPFELDKFQKEAIYYLQKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 514

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQKYR+   +F DVGL+TGDV++ P A+CL+MTTEILR MLYRG+++++++ WVI
Sbjct: 515  IKTISNQKYRDFCGKF-DVGLLTGDVSIRPEATCLIMTTEILRSMLYRGADIIRDIEWVI 573

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++  HV  T+
Sbjct: 574  FDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFADWIGRTKQKKIHVTSTN 633

Query: 248  FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ---KIG----------- 293
             RP PL+H +F    SG    + EK+ F    + + ++ F K+   K+G           
Sbjct: 634  KRPVPLEHCLF---YSGEVFKICEKDAFLTQGYREAKEVFKKKNSSKLGMKPGSKPGTTA 690

Query: 294  ------GRRENGKASGRMAK-------------------GGSGSGGSDIFKIVKMIMERK 328
                  GR  +  + GR  K                   G   S  S    ++  ++++ 
Sbjct: 691  VRAGTQGRNPDTSSRGRDQKNPKHHHASSSAAAVQQSTSGPRRSESSFWMPLINNLLKKS 750

Query: 329  FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
              PV++F FS+  C++ A SM   D  +  EK  +      A   L   DRNLP +  + 
Sbjct: 751  LVPVVIFCFSKNRCDRSAESMFGADLTSNSEKSEIRLFCDKAFSRLKGSDRNLPQVVGIQ 810

Query: 389  PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
             LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF +++K+D
Sbjct: 811  SLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDSLRKFD 870

Query: 449  GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFR 507
            G  HR +  GEYIQM+GRAGRRG D+ G  I+M  DE  E + LK++++GKP  L S FR
Sbjct: 871  GKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLESQFR 930

Query: 508  LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK-LEEEAASLDA-SGE 565
            L+Y  IL+L+ R E +   E ++K SF +F  +K LP+  K + + L +   +++   GE
Sbjct: 931  LTYTMILHLL-RVE-ELKVEDMLKRSFAEFHAQKNLPEKEKLLLQMLRQPTKTIECIKGE 988

Query: 566  AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGWGVVVNVVK 624
              + EY+++ L+     + +   I +       L  GRL+ V+ +   D   GV   +VK
Sbjct: 989  PAIEEYYEMVLEAEAHRESITEAIMQLPASQQSLTPGRLVVVKSQSDDDHLLGV---IVK 1045

Query: 625  KPSAGV 630
             PSA +
Sbjct: 1046 TPSAAL 1051



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 173/305 (56%), Gaps = 5/305 (1%)

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            + ++RL   P          +L+  Q   +++P  L   + +KD+K++D  +V+     +
Sbjct: 1149 IDQVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAAL---DAIKDLKMKDMLLVENYYAYQ 1205

Query: 712  ELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             L  K+  +  +   + +  I   + +     ++  LK +M D  +Q+   E + R  VL
Sbjct: 1206 RLLQKMSENKCHGCIKLKEHIALMKEQKVYKDQLNDLKYEMSDEALQQM-PEFQGRIDVL 1264

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            K++ +ID+D VVQLKGR AC +++G+EL+ TE +F    +DL+  +  A+ S  +   ++
Sbjct: 1265 KEIHYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSALVFQQRN 1324

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
            + + +L  +LA   +++ ++A ++ ++Q E K+ V+ +EY    ++  L++V+Y W+KG 
Sbjct: 1325 TSEPSLTPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKGT 1384

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
             FA++ ++TD+ EG I+R+  RLDE   + R AA  +G   L KK   AS +++R I+F+
Sbjct: 1385 PFADICELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALHKKMETASNAIKRDIVFA 1444

Query: 951  NSLYL 955
             SLY+
Sbjct: 1445 ASLYV 1449


>gi|393238207|gb|EJD45745.1| antiviral helicase [Auricularia delicata TFB-10046 SS5]
          Length = 1124

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 257/596 (43%), Positives = 356/596 (59%), Gaps = 52/596 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+
Sbjct: 167 MAHKYPFELDTFQKQAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAMKHMTRAIYTSPI 226

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+    F    VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +V
Sbjct: 227 KALSNQKFRDFKTTFSSASVGILTGDVQINPEAACLIMTTEILRSMLYKGADLIRDVEFV 286

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+WI    K+  +V+ T
Sbjct: 287 IFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWIGRTKKKDIYVIST 346

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG------- 299
             RP PL+H+++   G  +Y +VD    F    +    +   +++   R   G       
Sbjct: 347 PQRPVPLEHFLY--AGRDMYKIVDATGTFVGQGYKDASEALRRKQDKEREAAGLPPVQRV 404

Query: 300 ------------KASGRMAKGGSGSG-------------GSDIFKIVKMIMERKFQ---P 331
                         +GR A  G G               G D    V M+   K +   P
Sbjct: 405 GARGGAQRGGRGAPTGRGAPTGRGGPPMRGRGGGPGRTIGVDKNLYVHMLGLLKKKALLP 464

Query: 332 VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
           V+VF+FS+R CE++A +++ +D ++  E+  V  V + A+  L   D+ LP I  M  LL
Sbjct: 465 VVVFTFSKRRCEENAGTLTNVDLSSAAERSEVHIVVEKALARLKGSDKRLPQIARMRDLL 524

Query: 392 KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            RGI VHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPA+ VVF+ ++K DG S
Sbjct: 525 SRGIGVHHGGLLPIVKEVVEILFARGLVKVLFATETFAMGVNMPARCVVFSHIRKHDGRS 584

Query: 452 HRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
            R +  GEY QMSGRAGRRG D  G+ II V DE  +M TL  M+LG P  LVS FRL+Y
Sbjct: 585 FRDLNPGEYTQMSGRAGRRGLDSTGVVIIAVQDEVPDMGTLTRMILGTPTRLVSQFRLTY 644

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA---- 566
             ILNL+ R E     E +IK SF +   +K +PD  KKV + EE   SL A  E     
Sbjct: 645 NMILNLL-RVEA-LRVEEMIKRSFSENATQKLMPDQQKKVLENEERLRSL-ARLECGVCL 701

Query: 567 -EVAEYHKLKLDIAQLEKKLMS-EITRPERVLYYLGSGRLIKVREGGTDWGWGVVV 620
            ++ E++   L +    ++L+   I   +R   +L SGR++ +R+G      GV++
Sbjct: 702 EDIDEFYDASLQVVNANQQLVELGIKHGDR---FLTSGRIVVLRDGHFPGNIGVLL 754



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 138/241 (57%), Gaps = 11/241 (4%)

Query: 723  NKSQDENQIRC--FQRKAEVNHEIQQLKSKMRDSQIQ------KFRDELKNRSRVLKKLG 774
            NK ++   + C  F+   +  H  + L++K+ D ++Q      +   E ++R  VLK+L 
Sbjct: 887  NKLRNRACLLCGDFEAHYQSFHGEKVLRAKIADLKLQISDQNLELLPEYESRIEVLKELN 946

Query: 775  HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
             ID +  V LKGR AC I+T  EL++TEL+   T  + D  +V AL SCF+  +K+  + 
Sbjct: 947  FIDNNSTVVLKGRVACEINTAHELILTELILENTLANYDPEEVVALLSCFVFQEKTDVEP 1006

Query: 835  NLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
             +  +L + L+ +   A ++  +Q + ++    ++  E+ ++P L++V+Y W+KG  F +
Sbjct: 1007 AIPEKLQEGLRAIHRIADRVGRVQLQHRVS---EQDFENKIKPGLVEVVYEWAKGMPFEQ 1063

Query: 895  VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            +  +TDI EG+I+R   RLDE   ++R AA+ +G+  L KK   A   ++R I+F+ SLY
Sbjct: 1064 ITSLTDIAEGTIVRVITRLDETCREVRDAARVIGDAELFKKMEEAQIKIKRDIVFAASLY 1123

Query: 955  L 955
             
Sbjct: 1124 F 1124


>gi|396081276|gb|AFN82894.1| Ski2 ATP-dependent RNA helicase [Encephalitozoon romaleae SJ-2008]
          Length = 869

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 309/935 (33%), Positives = 469/935 (50%), Gaps = 122/935 (13%)

Query: 44  VPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAG 103
           +PS Y+   DE I                  FE D FQ+ +   L R  SV VSAHTS+G
Sbjct: 34  IPSDYSKYVDERILNI--------------DFETDTFQKQAFYFLSRESSVFVSAHTSSG 79

Query: 104 KTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLV 163
           KT VAEYAI+++ +   R IYTSP+KALSNQKY +  Q++ DVG++TGDV ++P A CLV
Sbjct: 80  KTLVAEYAISLSQKHGTRTIYTSPIKALSNQKYHDFKQKYDDVGIITGDVQVNPTAKCLV 139

Query: 164 MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATM 223
           MTTEILR ++YR  ++L++  +V+FDE+HY+ D ERGVVWEE II LP  I  + LSAT+
Sbjct: 140 MTTEILRNLVYRNGDLLRDTEFVVFDEVHYINDSERGVVWEECIIMLPRNISFIMLSATI 199

Query: 224 SNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL 283
            N+ +F+EW+     +  +V+ T  R  PL+H ++      +Y  +DE            
Sbjct: 200 PNSLEFSEWVGRTKNRTIYVISTSKRAVPLEHVIY--CDWNVY-SIDE------------ 244

Query: 284 QDTFLKQKIGGRREN-GKASGRM---AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSR 339
                    GG+ +N     G +   +K    +G   I  +   I+++K  P I F FS+
Sbjct: 245 ---------GGKIKNPSNFKGDLVPFSKKNRPTGRFKILDLANFIVKKKLTPSIFFCFSK 295

Query: 340 RECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHH 399
           R CE +A  +  LD N    ++ V+     A  CL+ ED+NLP +  M  ++  GIAVHH
Sbjct: 296 RRCEDYAEILRTLDLNDARSREEVKLFLSEATRCLSPEDKNLPQVLSMSSMVLNGIAVHH 355

Query: 400 SGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGE 459
             LLP +KE VELLF   LVK L ATETFAMG+NMPAK  VF ++ K D    RY+ SGE
Sbjct: 356 GSLLPFVKECVELLFSMNLVKLLIATETFAMGVNMPAKCCVFLSLSKIDSGVFRYVSSGE 415

Query: 460 YIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL----- 514
           YIQMSGRAGRRG D  G  +I   +   ++T++ ++ G P  L S F+LS+  IL     
Sbjct: 416 YIQMSGRAGRRGMDTVGTVVIADPKMPPLSTIRGIIHGTPFSLSSQFKLSFGLILISLRS 475

Query: 515 -----NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE-EEAASLDASGEAEV 568
                +LM R+ G+  +         Q  YEK +    K++S+LE E   + +  G+  +
Sbjct: 476 NIKVEDLMRRSYGEHRS---------QRNYEKDM----KRLSELERERDDTCNVCGD--L 520

Query: 569 AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA 628
             Y     +I     KL+++     +     G+  L+K    GT          V+K S 
Sbjct: 521 TNYIDAVEEICSKNWKLIAKHNVLNK-----GTRVLLKNNAVGT----------VEKISG 565

Query: 629 GVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP---- 684
               L +  G       LP I  LS           PL  R+ +  +   LE  F     
Sbjct: 566 TTVFLETEHGILNNSDPLP-IKFLS----------HPLSIRKPLDRSKVNLEHIFCVLND 614

Query: 685 -QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE 743
            Q     N    M + +      + ++  L   L +   +  + +       + +    E
Sbjct: 615 GQACWDYNTTNVMDVLE------IRRLRSLYDSLISEKKDCKEFDLHYSNALKTSHKRKE 668

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
           I+++K K     +    DE   R   LK+ G ++    + +KGRAA  I T +E+LV E+
Sbjct: 669 IEEIKIKYNVCSLGMI-DEYNKRIEFLKRRGFVEE--AITMKGRAAAEIHTVNEVLVVEM 725

Query: 804 MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
           +F+  F ++D  ++ +L S  I  ++  EQ        +P + L    +K+ E   E  L
Sbjct: 726 IFSNEFREMDGRKIISLMSSMIH-EEPDEQ--------EPGETLYVECKKMKEYFAE--L 774

Query: 864 EVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
             +++E +     P    L++ +Y W  G++ A+++    + EG+ +R   RL+E   +L
Sbjct: 775 SKDLEELMIPPFAPLTFSLVEAVYDWCSGSSLAKIVSNHGVLEGTFVRLILRLEECCREL 834

Query: 921 RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +  +G+  LE+K   AS S++R I+F  SLYL
Sbjct: 835 MGVSAMIGDKALEEKIRDASMSMKRDIIFLPSLYL 869


>gi|363743132|ref|XP_419251.3| PREDICTED: LOW QUALITY PROTEIN: helicase SKI2W [Gallus gallus]
          Length = 1477

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 244/582 (41%), Positives = 353/582 (60%), Gaps = 36/582 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  + F  D FQ+ +  CLER +S+LV+AHTSAGKTAVAEYAIA+A R   R IYTSP+K
Sbjct: 213 AFKWPFRPDAFQQRAALCLERGQSLLVAAHTSAGKTAVAEYAIALARRHMTRAIYTSPIK 272

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+R+    F DVGL+TGDV L  +ASCL+MTTEILR MLY GSEVL+E+ WVIFD
Sbjct: 273 ALSNQKFRDFRATFGDVGLLTGDVQLRTDASCLIMTTEILRSMLYNGSEVLRELEWVIFD 332

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ D ERGVVWEE++I LP  + +V LSAT+ NA +FA+W+    ++   V+ T  R
Sbjct: 333 EVHYINDAERGVVWEETLILLPEHVGLVLLSATIPNALEFAQWVGRTKRRCLRVLSTRQR 392

Query: 250 PTPLQHYVFPVGGSG------LYLVVDEKEQFREDNFV------KLQDTFLKQKIGGRRE 297
           P PL+H+++  GG G      L+L++D +  F    +       K + +   Q  G ++ 
Sbjct: 393 PVPLEHFLY-TGGGGPPSPRDLFLLLDARGGFNTQGYYAAVEAQKQRASKHTQSFGAKQP 451

Query: 298 NGKASGRMAKGGSGSGGSDIF--KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
           +G        GGSG G        +V ++  +   P + F+FSR  C+ HA   +  D +
Sbjct: 452 HG--------GGSGPGQDRAMWHSLVALLQAQGQLPAVAFTFSRGRCDAHAAPWAAPDLS 503

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
           +  EK  V    +  +  L   DR LP +  M  LL+RGI VHHSG+LP++KE+VE+LF 
Sbjct: 504 SAAEKGRVRGFVRRCLARLRGXDRRLPQVLQMSELLERGIGVHHSGVLPLLKEVVEMLFS 563

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           +GLVK LFATETFAMG+NMPA+TV+F +++K DG++ R +  GEY+QMSGRAGRRG D  
Sbjct: 564 QGLVKLLFATETFAMGVNMPARTVIFDSIRKHDGNNFRDLLPGEYVQMSGRAGRRGLDRT 623

Query: 476 GICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
           G  II+    + +M  L  ++LG+P+ L S FRL+Y +IL+L   A    T E +++NSF
Sbjct: 624 GTVIILCRGTVPDMADLHRVMLGRPSGLQSQFRLTYGTILSLQRAA--ALTVEGLMRNSF 681

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASLDASGEA-------EVAEYHKLKLDIAQLEKKLMS 587
            +F   +      ++V++L++E   L A GE        ++ +Y++    + +   +L  
Sbjct: 682 GEFPLRRRAAAQQRRVAELQQE---LKALGEPPQEGTLDDLPQYYEAVQGLLEARAELQR 738

Query: 588 EITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG 629
            + +    L  L  GR++ V         G+++ V  +   G
Sbjct: 739 RVAQSVAGLKALAPGRVVVVCTPQHHNALGLILQVTAESGGG 780



 Score = 42.0 bits (97), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 8/144 (5%)

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
            F  +  +  +++QL+ ++ D  +     E + R  VL+ LG++   G VQL GR A L+ 
Sbjct: 868  FAARRRLQAQVEQLQYELSDRSLLLL-PEYRQRLGVLRALGYVADGGAVQLPGRVAALLS 926

Query: 794  TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
              + LL   L+ N   + L   +VAAL SC +   +         +L   LQ+L E  + 
Sbjct: 927  CHELLLTELLLGN-VLSPLRPEEVAALLSCTVHPGRGEPP----PKLPPNLQRLSEKDKP 981

Query: 854  IAEIQ--NECKLEVNVDEYVESTV 875
              +IQ      +E+ +D     TV
Sbjct: 982  YVDIQGLTASTMEILLDFVYTETV 1005


>gi|452822987|gb|EME30001.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
          Length = 1258

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/489 (46%), Positives = 327/489 (66%), Gaps = 20/489 (4%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           +A+  +E++   F   V N  +A  + FELD FQ+ ++  LER E+V V+AHTSAGKT V
Sbjct: 313 WAIVDNESV-SEFWKSVPN--LALEFPFELDDFQKRAILHLEREENVFVTAHTSAGKTVV 369

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTE 167
           AEYAIA+A + + + IYTSP+K LSNQKYR+   +F DVG++TGD+++ P  SCL++TTE
Sbjct: 370 AEYAIALAMQHQTKCIYTSPIKTLSNQKYRDFQDKFSDVGIITGDISIHPQGSCLIVTTE 429

Query: 168 ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
           ILR MLY+G++V++++ +V+FDE+HY+ D ERGVVWEE II LPP IK++ LSAT+ NA 
Sbjct: 430 ILRSMLYKGADVVRDIEFVVFDEVHYINDEERGVVWEEVIIMLPPRIKIIMLSATVPNAL 489

Query: 228 QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
            FA+W+    +    V+ T +RP PLQH  F  G   +  +VD K +F E+++ ++    
Sbjct: 490 DFAKWVGRTRQSKVFVISTQYRPVPLQHSAFWKG--DMITLVDAKGRFLEESYRRISQIV 547

Query: 288 LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
            ++K          + R+     G  GS   K+   + +++  P +VF FS+R CE+ A 
Sbjct: 548 KEEK----------ANRLGGSFGGKKGS-WTKLTNFLRKQQLTPTVVFCFSKRRCEEAAD 596

Query: 348 SMSKLDFNT-QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVI 406
           S+  +DF     EK  + Q  ++++  L  EDR LP IE +  +LKRGIAVHH+G+LP++
Sbjct: 597 SLQAVDFTEGASEKSNIHQFVEHSIARLKREDRQLPQIERLKEMLKRGIAVHHAGILPIM 656

Query: 407 KELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGR 466
           KE VE+LFQ+GLV+ LFATETFAMG+NMPA+TVVF++++K DG S R++  GEYIQM+GR
Sbjct: 657 KECVEILFQKGLVRILFATETFAMGVNMPARTVVFSSLRKHDGRSFRFVEPGEYIQMAGR 716

Query: 467 AGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           AGRRG D  G  +I + E + +  TLK ++ G P  L S FRL+Y  ILNL+ R E    
Sbjct: 717 AGRRGLDAVGNVLIYLSEDIPDAATLKYILTGPPIRLSSRFRLTYNMILNLL-RVED-LK 774

Query: 526 AEHVIKNSF 534
            E +I+ SF
Sbjct: 775 VEDMIRRSF 783



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 153/272 (56%), Gaps = 9/272 (3%)

Query: 689  KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-DENQIRCFQRKAEVNHEIQQL 747
            +L P K M + D EV +   Q E    K     ++KS    + ++   +   ++ ++  L
Sbjct: 990  RLIPKKHMNVHDFEVENCWEQRETFIAKWRQSNVSKSNLFLSALQLLDKYHRLSEKLSVL 1049

Query: 748  KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
            +  M D  +Q   D    R++VL+KL  ++ + +VQLKGRAAC I++ D LLV +++F  
Sbjct: 1050 QWIMSDESLQLMPD-YTLRTQVLRKLEFVNEENIVQLKGRAACEINSCDSLLVVQVVFEN 1108

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA----EIQNECKL 863
              + LD  + A+L S F  V + S Q++   +L   L++  E  RKIA     +Q EC L
Sbjct: 1109 VLDRLDAAECASLLSIF--VFQGSSQVS-EFDLTPTLEEAVERVRKIALAIGNLQAECGL 1165

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
             V+  EY+   ++  LM V+  W++G +F+++  +TD+ EGSI+R+  RL E L +L+  
Sbjct: 1166 PVSPPEYLRQNLQNALMQVVLWWAQGRSFSDICSITDVPEGSIVRNINRLAELLKELKNV 1225

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             + +G  +L +K   A+ES+RR I F+ SLY+
Sbjct: 1226 TRVIGNPSLYQKLERANESIRRDICFTASLYV 1257


>gi|403166078|ref|XP_003325991.2| hypothetical protein PGTG_07821 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|375166060|gb|EFP81572.2| hypothetical protein PGTG_07821 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 1289

 Score =  437 bits (1125), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 253/654 (38%), Positives = 374/654 (57%), Gaps = 60/654 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y FELD FQ+ ++  LE  +SV V+AHTSAGKT VAEYA+A+A R   R IYTSP+
Sbjct: 302 MARQYPFELDTFQKEAIYHLEMGDSVFVAAHTSAGKTVVAEYAVALARRHMTRCIYTSPI 361

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  Q F  + VG++TGDV ++P ASCL++TTEILR MLY+G++++++V +V
Sbjct: 362 KALSNQKFRDFRQTFDAETVGILTGDVQVNPEASCLILTTEILRSMLYKGADLIRDVEFV 421

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           +FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++  +V+ T
Sbjct: 422 VFDEVHYINDSERGVVWEEVIIMLPAHVTIILLSATVPNTKEFADWVGRTKRKDIYVIST 481

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS---- 302
             RP PL+H+++      ++ +VD K +F    +    ++  + ++  R  +G+A     
Sbjct: 482 PKRPVPLEHFLY--ANKEIHKIVDAKGEFLSQGWKDAIESMKRLQVKEREASGQAPLTRL 539

Query: 303 ---------------GRMAK-GGSGSGGSDI--------------------------FKI 320
                          GR  K GG GS  S                              +
Sbjct: 540 GHNAAKQGPQRGQQRGRADKRGGRGSQSSSHFSSAMSRGGGGGPNSGRGHQEDQNRWVHL 599

Query: 321 VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
           V M+ +++  PV+ F+FS++ CE++A SM   D  + +EK  +  V + ++  LN  D+ 
Sbjct: 600 VGMLKKKELLPVVAFTFSKKRCEENATSMPNTDLCSAKEKSEIHIVIERSLTRLNGTDKK 659

Query: 381 LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
           LP I  M  LL RGIAVHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPA+ VV
Sbjct: 660 LPQIIRMRDLLARGIAVHHGGLLPIVKEVVEILFARGLVKILFATETFAMGVNMPARCVV 719

Query: 441 FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKP 499
           F+ ++K DG S R + SGEY QMSGRAGRRG D  G+ II+  +E  +   L  M+LG  
Sbjct: 720 FSGIQKHDGRSFRELLSGEYTQMSGRAGRRGLDSTGVVIIICGNEVPDTVGLHKMILGPA 779

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
             L S FRL+Y  +LNL+ R E     E +IK+SF +   ++ LPD  KK+ + E E  +
Sbjct: 780 TKLQSQFRLTYNMVLNLL-RVEA-LRVEEMIKSSFSENAQQRLLPDQQKKILEGERELLA 837

Query: 560 L----DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWG 615
           L    D+     +  YH++   + +L  +L+  +         L +GRLI + +      
Sbjct: 838 LPVQDDSDSIQNIRRYHEVSSRLVELNSQLLESVANHPSGSRALSAGRLIILNDNHFRHN 897

Query: 616 WGVVVNVVKKPSAGV-GTLPSRGGGYIVPVQLPLISTLSKIRLS--VPPDLRPL 666
              ++   +   A   G L      +++    P I + S    +  VPP+  PL
Sbjct: 898 LAAILKPAQSLRANADGRLDHTRSFFVLAFVPPAIRSKSSDIAADEVPPEWPPL 951



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 129/235 (54%), Gaps = 4/235 (1%)

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N  + E       R+  +   +  L++ + +  ++   D  +NR +VLK+L  ID    V
Sbjct: 1057 NDKEFEKLYAAIHREKIITQRLALLQASLSEQNLELLPD-YENRLKVLKELKFIDNRATV 1115

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
             LKGR AC I++  EL++TE++ +    D D  +  AL S F+   K+  +  L   L +
Sbjct: 1116 LLKGRVACEINSSHELILTEVILDNILADFDPAETVALLSSFVFQGKTESEPFLTPNLQR 1175

Query: 843  PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTD 900
               +L + A +I  +    K+  + D+      RP   ++++++ W++G  F+E+++M++
Sbjct: 1176 GCDRLAKIADRIEAVSLRNKV-ADHDQANSGKGRPNFGMVELVWQWAQGMPFSELMEMSE 1234

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            I EG I+R+  RLDE   ++R AA+ +G+++L KK  A    +RR ++F +SLY+
Sbjct: 1235 IQEGVIVRTMTRLDESCREVRDAARIIGDISLGKKMEACQALIRRDVVFVSSLYI 1289


>gi|336389976|gb|EGO31119.1| ATP-dependent RNA helicase [Serpula lacrymans var. lacrymans S7.9]
          Length = 1209

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/590 (40%), Positives = 351/590 (59%), Gaps = 52/590 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 242 EMAHEYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAEKHMTRAIYTSP 301

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+  Q F    VG++TGDV ++P ASCLVMTTEILR MLY+G++++++V +
Sbjct: 302 IKALSNQKFRDFKQTFSSSSVGILTGDVQINPEASCLVMTTEILRSMLYKGADLIRDVEF 361

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 362 VIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 421

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
           T  RP PL+HY++   G   + +VD   ++  + +    +   +              Q+
Sbjct: 422 TAQRPVPLEHYIY--AGRETFKIVDANRRWISEGYKDAGEALKRKQDKAREAAGLPPVQR 479

Query: 292 IGGR---RENGKASGRMAKGG------------------------SGSGGSDIFKIVKMI 324
           +G R      G+  G   +GG                        +G+  +    ++  +
Sbjct: 480 VGARGAAPRGGQRGGTPTRGGQRGATPNNRGAPPGRGGGPSRIIHTGADKNLYVHLLNHL 539

Query: 325 MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
            ++   PV+VF+FS+++CE++A +++  D  T  EK  +    + A+  L   D+ LP I
Sbjct: 540 QKKTLLPVVVFTFSKKKCEENAGTLTNADLCTSVEKSEIHVAIEKALSRLKGTDKKLPQI 599

Query: 385 ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
             M  LL RGI VHH G+LP++KE+VE+LF  GLVK LFATETFAMG+NMPA+ VVF+ +
Sbjct: 600 SRMRDLLSRGIGVHHGGILPIVKEVVEILFGRGLVKILFATETFAMGVNMPARCVVFSGI 659

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLV 503
           +K DG S R I  GEY QM+GRAGRRG D  G  II+V++++ +  +++ M+LG PA L 
Sbjct: 660 RKHDGKSFRDILPGEYTQMAGRAGRRGLDPTGTVIIVVNDELPDQTSIQHMMLGTPAKLQ 719

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA- 562
           S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  K+V + E+  +SL   
Sbjct: 720 SQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQKLLPDQQKEVVQHEKALSSLPKL 777

Query: 563 ---SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
                  ++  Y+     I Q   +L++ +         L SGR+  +R+
Sbjct: 778 QCEVCLPDIEHYYDDTSTIVQHNGRLLAMVISNPSNSNMLASGRVAVLRD 827



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I  LK  + D  ++   D  + R  VLK+L  ID +  +QLKGR AC I++ +EL++TEL
Sbjct: 1002 ISFLKLAISDQNLELIPD-YEQRIEVLKELNFIDDNSTIQLKGRVACEINSTNELVLTEL 1060

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +   T  + D  +V AL SCF+  +K+     +  +L +    +     +I  +Q+  K+
Sbjct: 1061 ILENTLANYDPEEVVALLSCFVFQEKTDIDPIISPKLEQGRDAIVAILDRIGRVQDRHKV 1120

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
             V   E   S ++  L +V+Y W+KG  F ++  +TD+ EG+I+R   RLDE   ++R A
Sbjct: 1121 VV---EEFRSNLKFGLTEVVYEWAKGMPFEQITALTDVAEGTIVRVITRLDETCREVRDA 1177

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+ +G+ +L KK   A   ++R I+F+ SLY 
Sbjct: 1178 ARVIGDADLFKKMEEAQIKIKRDIVFAASLYF 1209


>gi|336376932|gb|EGO05267.1| hypothetical protein SERLA73DRAFT_68899 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 1291

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/590 (40%), Positives = 351/590 (59%), Gaps = 52/590 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 324 EMAHEYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAEKHMTRAIYTSP 383

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+  Q F    VG++TGDV ++P ASCLVMTTEILR MLY+G++++++V +
Sbjct: 384 IKALSNQKFRDFKQTFSSSSVGILTGDVQINPEASCLVMTTEILRSMLYKGADLIRDVEF 443

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 444 VIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 503

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
           T  RP PL+HY++   G   + +VD   ++  + +    +   +              Q+
Sbjct: 504 TAQRPVPLEHYIY--AGRETFKIVDANRRWISEGYKDAGEALKRKQDKAREAAGLPPVQR 561

Query: 292 IGGR---RENGKASGRMAKGG------------------------SGSGGSDIFKIVKMI 324
           +G R      G+  G   +GG                        +G+  +    ++  +
Sbjct: 562 VGARGAAPRGGQRGGTPTRGGQRGATPNNRGAPPGRGGGPSRIIHTGADKNLYVHLLNHL 621

Query: 325 MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
            ++   PV+VF+FS+++CE++A +++  D  T  EK  +    + A+  L   D+ LP I
Sbjct: 622 QKKTLLPVVVFTFSKKKCEENAGTLTNADLCTSVEKSEIHVAIEKALSRLKGTDKKLPQI 681

Query: 385 ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
             M  LL RGI VHH G+LP++KE+VE+LF  GLVK LFATETFAMG+NMPA+ VVF+ +
Sbjct: 682 SRMRDLLSRGIGVHHGGILPIVKEVVEILFGRGLVKILFATETFAMGVNMPARCVVFSGI 741

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLV 503
           +K DG S R I  GEY QM+GRAGRRG D  G  II+V++++ +  +++ M+LG PA L 
Sbjct: 742 RKHDGKSFRDILPGEYTQMAGRAGRRGLDPTGTVIIVVNDELPDQTSIQHMMLGTPAKLQ 801

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA- 562
           S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  K+V + E+  +SL   
Sbjct: 802 SQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQKLLPDQQKEVVQHEKALSSLPKL 859

Query: 563 ---SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
                  ++  Y+     I Q   +L++ +         L SGR+  +R+
Sbjct: 860 QCEVCLPDIEHYYDDTSTIVQHNGRLLAMVISNPSNSNMLASGRVAVLRD 909



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I  LK  + D  ++   D  + R  VLK+L  ID +  +QLKGR AC I++ +EL++TEL
Sbjct: 1084 ISFLKLAISDQNLELIPD-YEQRIEVLKELNFIDDNSTIQLKGRVACEINSTNELVLTEL 1142

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +   T  + D  +V AL SCF+  +K+     +  +L +    +     +I  +Q+  K+
Sbjct: 1143 ILENTLANYDPEEVVALLSCFVFQEKTDIDPIISPKLEQGRDAIVAILDRIGRVQDRHKV 1202

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
             V   E   S ++  L +V+Y W+KG  F ++  +TD+ EG+I+R   RLDE   ++R A
Sbjct: 1203 VV---EEFRSNLKFGLTEVVYEWAKGTPFEQITALTDVAEGTIVRVITRLDETCREVRDA 1259

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+ +G+ +L KK   A   ++R I+F+ SLY 
Sbjct: 1260 ARVIGDADLFKKMEEAQIKIKRDIVFAASLYF 1291


>gi|426201331|gb|EKV51254.1| hypothetical protein AGABI2DRAFT_182217 [Agaricus bisporus var.
           bisporus H97]
          Length = 1231

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/580 (41%), Positives = 346/580 (59%), Gaps = 42/580 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAI +A +   R IYTSP+
Sbjct: 269 MAREYPFELDTFQKQAVYHLELGDSVFVAAHTSAGKTVVAEYAIGLAEKHMTRAIYTSPI 328

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  Q F    VG++TGDV ++P A+CLVMTTEILR MLY+G++++++V +V
Sbjct: 329 KALSNQKFRDFKQSFSSSSVGILTGDVQINPEATCLVMTTEILRSMLYKGADLIRDVEFV 388

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ T
Sbjct: 389 IFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIST 448

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
             RP PL+HY++   G   + +VD K  F  + +   +D   +++   R   G A  +  
Sbjct: 449 LQRPVPLEHYLY--AGRDKFKIVDAKRTFLSNGYSDARDALRRKQDKEREAAGLAPVQAT 506

Query: 307 KGGS--------GSGGSDI-----------------------FKIVKMIMERKFQPVIVF 335
           +G           S GS +                         ++  + +    PV++F
Sbjct: 507 RGRGASARGGGANSRGSTLATRGRGGRGGGPARTIHADKNVYVHLLGHLKKENLLPVVIF 566

Query: 336 SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           +FS++ CE++A ++   D  T  EK  V    + A+  L   D+ LP I  M  LL RGI
Sbjct: 567 TFSKKRCEENARTLMNADLCTSVEKSEVHVAIEKALSRLKGSDKKLPQIARMRDLLSRGI 626

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPAK VVF+ ++K DG + R I
Sbjct: 627 GIHHGGLLPIMKEVVEILFARGLVKVLFATETFAMGVNMPAKCVVFSNIRKHDGRNFRDI 686

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
             GEY QM+GRAGRRG D  G  II+V + + E NTL  M+LG P  L+S FRL+Y  IL
Sbjct: 687 LPGEYTQMAGRAGRRGLDTTGTVIILVGDSLPEQNTLHTMLLGTPGKLMSQFRLTYNMIL 746

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAE 570
           NL+ R E     E +IK SF +   ++ LP   KKV + E++ ++L          ++  
Sbjct: 747 NLL-RVEA-LRVEEMIKRSFSENSSQRLLPMNQKKVIESEKKLSTLQRLACEQCIPDIGA 804

Query: 571 YHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
           Y+    +   L +KL++   R  +    L SGR++ +R+ 
Sbjct: 805 YYDDIHEAVNLNQKLINMAVRHPQGSKLLSSGRVVILRDN 844



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 117/212 (55%), Gaps = 4/212 (1%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I  LK  + D  ++   D  + R  VLK L  ID +  V LKGR AC I++ +EL++TEL
Sbjct: 1024 IAHLKLAISDQNLELIPD-YEQRIEVLKDLKFIDENSTVLLKGRVACEINSANELVLTEL 1082

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +   T  + +  +V AL SCF+  +K+  + ++   L +    +   +  ++ +Q+  K+
Sbjct: 1083 ILENTLANYEPEEVVALLSCFVFQEKTEVEPSIPPRLQEGRDAILAISDSVSRVQDRNKV 1142

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
                 E   S ++  L +V+Y W++G  F ++  +TD+ EG+I+R   RLDE   ++R A
Sbjct: 1143 ---ASEEFRSELKFGLTEVVYEWAQGMPFEQITALTDVPEGTIVRCITRLDETCREVRDA 1199

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+ +G+  L KK   A   ++R I+F+ SLY 
Sbjct: 1200 ARVIGDARLFKKMEEAQLKIKRDIVFAASLYF 1231


>gi|320583622|gb|EFW97835.1| Putative RNA helicase [Ogataea parapolymorpha DL-1]
          Length = 1228

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 238/585 (40%), Positives = 357/585 (61%), Gaps = 39/585 (6%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+ FELD FQ+ +V  LE+N+SV V+AHTSAGKT VAEYAIA+A R+  + IYTSP+K
Sbjct: 273 ARTWPFELDTFQKEAVYHLEKNDSVFVAAHTSAGKTVVAEYAIALANRNMTKTIYTSPIK 332

Query: 130 ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           ALSNQK+R+  + F DV  G++TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 333 ALSNQKFRDFKESFDDVDVGVITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 392

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  IK+V LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 393 FDEVHYVNDIERGVVWEEVIIMLPEHIKVVLLSATVPNTYEFASWVGRTRQKDIYVISTS 452

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK-IGGRRENGKA----- 301
            RP PL+ +V+      ++ ++D    F++ NF   +D  LK+K +    + GK+     
Sbjct: 453 KRPVPLEIFVW--AKDDIFKLIDANGSFQQKNFRLHEDKLLKKKDVPDTNDKGKSGAVVR 510

Query: 302 --------------------SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRE 341
                               SG+M K   G   +    +V  + ++   P ++F FS++ 
Sbjct: 511 GGARGGARGGRGGARGGSTMSGKMFKR-DGPNKNSWHNLVTFLQKKDLMPAVIFVFSKKR 569

Query: 342 CEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
           CE++A ++  ++F T +E   +      AV  L +EDR LP I  +  +L RGIAVHH G
Sbjct: 570 CEEYADTLRGVNFCTAKEASQIHMFIDKAVSRLKKEDRELPQILKVREMLSRGIAVHHGG 629

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           LLP++KE++E+LF + L+K LFATETFAMGLN+P +TVVF+ ++K DG  +R +  GE+ 
Sbjct: 630 LLPIVKEIIEILFSKTLIKVLFATETFAMGLNLPTRTVVFSELRKHDGTGYRNLLPGEFT 689

Query: 462 QMSGRAGRRGKDDRGICIIMVDEQ-MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           QMSGRAGRRG D  G  I+M   Q +E    K++ +G    L S FRL+Y  ILNL+ R 
Sbjct: 690 QMSGRAGRRGLDSTGTVIVMAYNQPLEEFAFKEVTMGTATKLSSKFRLTYNMILNLL-RI 748

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG--EAEVAEYHKLKLDI 578
           E     E +IK SF +   +  LP+   +++KLE++   L      E + A+ +     +
Sbjct: 749 EA-LRVEEMIKRSFGENTTQSLLPEHEIEIAKLEKQLRDLKKQNISEEDNAKLNLFYNTM 807

Query: 579 AQLEKKLMSEITRPERVLYY---LGSGRLIKVREGGTDWGWGVVV 620
            +++++    +    ++LYY   L  GRL+  R+  T+  +  V 
Sbjct: 808 EEMKEQYGDLVQESMKLLYYQKRLKVGRLVVYRDRDTNQSYPAVT 852



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 18/272 (6%)

Query: 698  IEDPEVVDLVNQIEELEHKL---FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDS 754
             ++P +++++ +I+EL   +   FA     S  E +   F  +  +   I+ LKS M + 
Sbjct: 961  FQNPNMIEILTRIDELRDTVMNCFADEKFDSLVEAEYPTFMNRKNIEKRIESLKSLMSEE 1020

Query: 755  QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
             ++   D  + R  VLK+L  ++    V LKGR AC I+ G EL+VTEL+F         
Sbjct: 1021 NLELLPD-YEQRLEVLKQLEFVNDQLTVTLKGRVACEINFGFELIVTELVFENILGTFTS 1079

Query: 815  HQVAALASCFIPVDKSSEQ------INLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
             ++ AL SCF+   K             R+E  K   ++ E   ++ ++ NE K+ +  +
Sbjct: 1080 EEIVALLSCFVYDGKRGNDEGPAPLCTPRLESGK--DKIVEIVEQVMKVSNENKIILTAE 1137

Query: 869  E--YVESTVRPFLMDVIYCWSKGATFAEVIQMTDI---FEGSIIRSARRLDEFLNQLRAA 923
            E  ++E+  R  L++V+Y W++G +F +++++++     EG+I+R   RLDE    +   
Sbjct: 1138 EEQFLENN-RFGLVNVVYEWARGQSFKDIMELSNDENEAEGTIVRVITRLDEVCRVVMNC 1196

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A  VG+  L  K   A E ++R I+F  SLYL
Sbjct: 1197 ALIVGDSELHMKMGEAQEKIKRDIVFCASLYL 1228


>gi|50251266|dbj|BAD28046.1| putative Helicase SKI2W [Oryza sativa Japonica Group]
          Length = 1281

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 248/610 (40%), Positives = 363/610 (59%), Gaps = 56/610 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  Y FELD FQ+ ++  L++ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 280 DMAIEYPFELDKFQKEAIYYLQKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 339

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+   +F DVGL+TGDV++ P A+CL+MTTEILR MLYRG+++++++ WVI
Sbjct: 340 IKTISNQKYRDFCGKF-DVGLLTGDVSIRPEATCLIMTTEILRSMLYRGADIIRDIEWVI 398

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++  HV  T+
Sbjct: 399 FDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFADWIGRTKQKKIHVTSTN 458

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ---KIG----------- 293
            RP PL+H +F    SG    + EK+ F    + + ++ F K+   K+G           
Sbjct: 459 KRPVPLEHCLF---YSGEVFKICEKDAFLTQGYREAKEVFKKKNSSKLGMKPGSKPGTTA 515

Query: 294 ------GRRENGKASGRMAK-------------------GGSGSGGSDIFKIVKMIMERK 328
                 GR  +  + GR  K                   G   S  S    ++  ++++ 
Sbjct: 516 VRAGTQGRNPDTSSRGRDQKNPKHHHASSSAAAVQQSTSGPRRSESSFWMPLINNLLKKS 575

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             PV++F FS+  C++ A SM   D  +  EK  +      A   L   DRNLP +  + 
Sbjct: 576 LVPVVIFCFSKNRCDRSAESMFGADLTSNSEKSEIRLFCDKAFSRLKGSDRNLPQVVGIQ 635

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT----VVFTAV 444
            LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+T    VVF ++
Sbjct: 636 SLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTLKDLVVFDSL 695

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLV 503
           +K+DG  HR +  GEYIQM+GRAGRRG D+ G  I+M  DE  E + LK++++GKP  L 
Sbjct: 696 RKFDGKEHRKLLPGEYIQMAGRAGRRGLDNIGTVIVMCRDEIPEESDLKNLIVGKPTRLE 755

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK-LEEEAASLDA 562
           S FRL+Y  IL+L+ R E +   E ++K SF +F  +K LP+  K + + L +   +++ 
Sbjct: 756 SQFRLTYTMILHLL-RVE-ELKVEDMLKRSFAEFHAQKNLPEKEKLLLQMLRQPTKTIEC 813

Query: 563 -SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGWGVVV 620
             GE  + EY+++ L+     + +   I +       L  GRL+ V+ +   D   GV  
Sbjct: 814 IKGEPAIEEYYEMVLEAEAHRESITEAIMQLPASQQSLTPGRLVVVKSQSDDDHLLGV-- 871

Query: 621 NVVKKPSAGV 630
            +VK PSA +
Sbjct: 872 -IVKTPSAAL 880



 Score =  153 bits (386), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 173/305 (56%), Gaps = 5/305 (1%)

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            + ++RL   P          +L+  Q   +++P  L   + +KD+K++D  +V+     +
Sbjct: 978  IDQVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAAL---DAIKDLKMKDMLLVENYYAYQ 1034

Query: 712  ELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             L  K+  +  +   + +  I   + +     ++  LK +M D  +Q+   E + R  VL
Sbjct: 1035 RLLQKMSENKCHGCIKLKEHIALMKEQKVYKDQLNDLKYEMSDEALQQM-PEFQGRIDVL 1093

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            K++ +ID+D VVQLKGR AC +++G+EL+ TE +F    +DL+  +  A+ S  +   ++
Sbjct: 1094 KEIHYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSALVFQQRN 1153

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
            + + +L  +LA   +++ ++A ++ ++Q E K+ V+ +EY    ++  L++V+Y W+KG 
Sbjct: 1154 TSEPSLTPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKGT 1213

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
             FA++ ++TD+ EG I+R+  RLDE   + R AA  +G   L KK   AS +++R I+F+
Sbjct: 1214 PFADICELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALHKKMETASNAIKRDIVFA 1273

Query: 951  NSLYL 955
             SLY+
Sbjct: 1274 ASLYV 1278


>gi|328774102|gb|EGF84139.1| hypothetical protein BATDEDRAFT_9076, partial [Batrachochytrium
           dendrobatidis JAM81]
          Length = 868

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 239/517 (46%), Positives = 323/517 (62%), Gaps = 28/517 (5%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E+A  + FELD FQ+ +V  LE +ESV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 22  ELAHQFPFELDIFQKRAVYHLENSESVFVAAHTSAGKTVVAEYAIALAQKRMTRAIYTSP 81

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  + F DVG++TGDV + P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 82  IKALSNQKFRDFRETFDDVGILTGDVQIKPEASCLIMTTEILRSMLYRGADLIRDVEFVI 141

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++  +V+ T 
Sbjct: 142 FDEVHYVNDAERGVVWEEVIIMLPSHVSLILLSATVPNTKEFADWVGRTKQKDIYVISTL 201

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK---------------I 292
            RP PL+HY++       Y +VD  + F    + K  D     K                
Sbjct: 202 KRPVPLEHYLY--FEKDCYKIVDSTKTFIPAGYKKAYDAVNPPKKEVVKSDSGRGRGAGR 259

Query: 293 GGRRENGKASGRMAKGGSGSGGSD---IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
           GG + +  A    + G S  G SD      ++ M+ +R   P I+F+FS+R+CE++A ++
Sbjct: 260 GGGQSSQVARPSQSSGKSYGGPSDKNLYTHLIGMLKKRVLLPAIIFTFSKRKCEEYANTL 319

Query: 350 SKLDFNT-QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
           S  D      EK  +    + ++ CL   DR LP +  M  LL RGIAVHHSGLLP++KE
Sbjct: 320 SNTDLTLGSSEKSEIHVFIERSLVCLKGSDRELPQVMRMRELLGRGIAVHHSGLLPILKE 379

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           +VE+LF  GLVK LFATETFAMG+N PAK VVF+ ++K DG   R +  GEY QMSGRAG
Sbjct: 380 MVEILFTRGLVKVLFATETFAMGVNAPAKCVVFSMIRKHDGVGFRNLLPGEYTQMSGRAG 439

Query: 469 RRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           RRG DD G+ II     + +  TL  M+LG P  L S FR++Y  ILNL+ R E     E
Sbjct: 440 RRGLDDTGMVIIANSNDIPDQTTLNQMILGTPTKLASQFRVTYNMILNLL-RVEA-IKVE 497

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG 564
            +IK SF +   +KALP  G++  K+  EA  L  S 
Sbjct: 498 DMIKRSFSENINQKALP--GQQ--KMHNEAIVLRTSS 530



 Score =  148 bits (374), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 130/213 (61%), Gaps = 2/213 (0%)

Query: 743 EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
           +I +L   + D  +Q   D    R  VLK LG +D++ +VQ+KGR AC I+T DEL++TE
Sbjct: 658 QISELAHSISDQNLQLLPD-YHQRVDVLKCLGFVDSNSIVQIKGRVACEINTADELILTE 716

Query: 803 LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
           L+ +    D +  ++ AL SCF+  +KS  +  L  +L K ++ + E A KIAE+Q+ C 
Sbjct: 717 LILDNFLADYEPAEIVALLSCFVFQEKSQSEPVLTSKLEKGVKVITELAIKIAEVQHSCG 776

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           L+V  D+ + + ++  L++V+Y W++G  F  +  +TD+ EGSI+R   RL E   ++  
Sbjct: 777 LDVRKDDAL-AGLKFGLVEVVYEWARGLPFKHITDLTDVLEGSIVRCIVRLSETCREVSG 835

Query: 923 AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           AA+ +G+  L KK   A+E +RR I+F+ SLY 
Sbjct: 836 AARLLGDAGLYKKMEEAAELIRRDIVFAASLYF 868


>gi|393218249|gb|EJD03737.1| antiviral helicase [Fomitiporia mediterranea MF3/22]
          Length = 1052

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 245/590 (41%), Positives = 339/590 (57%), Gaps = 53/590 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 90  EMARKYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSP 149

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+  Q F    VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +
Sbjct: 150 IKALSNQKFRDFKQTFSSSSVGILTGDVQINPEANCLIMTTEILRSMLYKGADLIRDVEF 209

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 210 VIFDEVHYVNDAERGVVWEEVIIMLPEHVSIILLSATVPNTKEFADWVGRTKKKDIYVIS 269

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
           T  RP PL+HY++   G  ++ +VD K QF    + K     L++K    RE        
Sbjct: 270 TPSRPVPLEHYLY--AGRDIHKIVDSKGQFLSTGY-KDAGEALRRKQDKEREAAGLPPVQ 326

Query: 306 AKGGSGSGGSDI---------------------------------FKIVKMIMERKFQPV 332
             G   +                                        +V  + +    PV
Sbjct: 327 RLGARAAAPQRGQRGVTRGRGGGARGGGGAPGGPRTFHQPDKNLYVHLVGFLRKSNLLPV 386

Query: 333 IVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE--------DRNLPAI 384
           +VF+FS+R CE++A +++ +D ++  E+  V    + A+  L           D+ LP I
Sbjct: 387 VVFTFSKRRCEENAATLTNVDLSSASERSEVHVTIEKALARLKGRQTFILCCTDKKLPQI 446

Query: 385 ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
             M  LL RGI VHH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPAK VVF+ +
Sbjct: 447 GRMRDLLSRGIGVHHGGLLPIVKEVVEILFARGLVKVLFATETFAMGVNMPAKCVVFSGI 506

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLV 503
           +K DG S R + +GEY QM+GRAGRRG D  G  II   DE  E+ TL+ M+LG P  L 
Sbjct: 507 RKHDGKSFRTLEAGEYTQMAGRAGRRGLDTTGTVIITASDEVPEITTLQTMMLGTPMRLQ 566

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV---SKLEEEAASL 560
           S FRL+Y  ILNL+ R E     E +IK SF +   +K LPD  +KV    KL      L
Sbjct: 567 SQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENASQKLLPDQQRKVIENEKLLSTMPKL 624

Query: 561 DAS-GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE 609
           D      ++  Y+     +  L   L+S      +     G GR++ +R+
Sbjct: 625 DCEVCLPDIRAYYNTSAQVVDLNATLLSLAAASPQGSRTFGQGRIVILRD 674



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 119/212 (56%), Gaps = 4/212 (1%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I  LK  + D  ++   D  + R  VL++L  IDA+  V LKGR AC I++ DEL++TE+
Sbjct: 845  IDNLKLAISDQNLELIPD-YEQRIAVLQELKFIDANSTVLLKGRVACEINSADELILTEV 903

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +        +  +V AL SCF+  +K+  +  +   L +    +   A ++  +++  K+
Sbjct: 904  ILENMLATYEPEEVVALLSCFVFQEKTDVKPAVTPRLEEGRAAILGVAERVGAVEDRNKV 963

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
                    ES ++  L++V+Y W+KG  F +++ +TD+ EG+I+R   RLDE   ++R A
Sbjct: 964  ---ASPDSESRLKFGLVEVVYEWAKGMPFEQIMLLTDVAEGTIVRVITRLDETCREVRDA 1020

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+ +G+ +L KK   A   ++R I+F+ SLY 
Sbjct: 1021 ARVIGDASLMKKMEEAQVRIKRDIVFAASLYF 1052


>gi|452822286|gb|EME29307.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
          Length = 1249

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/569 (40%), Positives = 354/569 (62%), Gaps = 30/569 (5%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+ F+LD FQ+  +  LER E+V V+AHTSAGKT +AEYAIA+A + + R IYTSP+K
Sbjct: 346 ARTFPFKLDDFQKRGILHLEREENVFVTAHTSAGKTVIAEYAIALAIQHQTRAIYTSPIK 405

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           +LSNQKYR+    F+DVG++TGDV++ P ASCL+MTTEILR MLY+G+++++++ +VIFD
Sbjct: 406 SLSNQKYRDFLDNFRDVGIVTGDVSIHPEASCLIMTTEILRSMLYKGADLIRDIEFVIFD 465

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ D ERGVVWEE II LP  IK++ LSAT+ NA  FA+W+  + K    VV T  R
Sbjct: 466 EVHYINDEERGVVWEEVIIMLPSYIKLIMLSATVPNAMDFAKWVGAIRKSKVFVVGTHLR 525

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           P PLQH +F      LY +V  + +F    + +L            +E  K     +   
Sbjct: 526 PVPLQHCIF--FRKHLYTLVTAEGKFMTSVYKQL------------KELAKYKMIPSSDI 571

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT-QEEKDTVEQVFQ 368
             SG     ++V  + E    P ++F F+++ C++ A  +S +D      EK  +     
Sbjct: 572 RTSGAHPWRELVYYLNESNLVPAVIFCFAKKRCDELANLLSNVDLTIDSSEKFHIISFID 631

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            ++  L  EDR +P IE +  +L RGI +HH+G++P++KE+VE+LFQ+G V+ LFATETF
Sbjct: 632 KSISRLQAEDRIIPQIERLREMLSRGIGIHHAGIIPLMKEVVEILFQKGFVRVLFATETF 691

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPAKTV+F++++K DG   R++  GEYIQM+GRAGRRG D  G  ++ ++E + E
Sbjct: 692 AMGVNMPAKTVIFSSIRKHDGRKFRWMQPGEYIQMAGRAGRRGIDSVGTVLLFLEEDLPE 751

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
           MN L+ +++G+P  L+S FRL+Y  ILNL+   + Q   E +I++SF +  Y + +  + 
Sbjct: 752 MNILRKVMIGQPVNLLSQFRLTYNMILNLLRTEDLQ--VEDMIRHSFCEAPYARDVSVMS 809

Query: 548 K-------KVSKLEEEAASL-DAS---GEAEVAEYHKLKLDIAQLEKKLM-SEITRPERV 595
           K       K+  LEE  A + D S      +   ++ + ++  QL + L  + + + + +
Sbjct: 810 KLLVKGDLKLKHLEERIARIQDRSLHLTTVDFKRFYSVYVECEQLTQYLAKTTLAKTQCL 869

Query: 596 LYYLGSGRLIKVREGGTDWGWGVVVNVVK 624
             YL  GR+++V     D  + V++   +
Sbjct: 870 QNYLDLGRIVQVLGDDFDIHFAVIIGFTR 898



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 128/228 (56%), Gaps = 5/228 (2%)

Query: 689  KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQL 747
            ++ P +DM   +PE+ D   + E L   +   P+N+S +    ++ F+   E+  ++ ++
Sbjct: 1021 RIPPTEDMGYCNPEIQDAWKRREALIEDIEKSPVNRSFRKFTAMKMFELYHELEWKLAKI 1080

Query: 748  KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
            +  + D  +Q   D    R  VLKKLG I+ + ++QLKGRAAC ++  D +L TE++F  
Sbjct: 1081 RWALSDDSLQLMPD-YNLRVEVLKKLGFINEEHIIQLKGRAACELNICDCVLATEVIFEN 1139

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECKLEV 865
              N LD  + AA  S F+  + S++ +  +L   L   ++ L   A ++  +QNEC L +
Sbjct: 1140 VLNPLDSCECAAFLSSFV-FEGSTKCVLSSLTDPLLNAIEALGTIAHRVGNVQNECGLPI 1198

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            + +E+ +  +R  L DV+  W++G  F E+ ++T++ EG+IIR   RL
Sbjct: 1199 SAEEFAQQNIRTGLSDVVLLWAQGVKFVEICEVTEVPEGTIIRVINRL 1246


>gi|410925190|ref|XP_003976064.1| PREDICTED: LOW QUALITY PROTEIN: helicase SKI2W-like [Takifugu
           rubripes]
          Length = 1320

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/516 (44%), Positives = 322/516 (62%), Gaps = 22/516 (4%)

Query: 15  EDLHV----TGTPEEESTKKQRNLTRSCVHEV---AVPSGYALTKDEAIHGTFANPVYNG 67
           EDL +    + +P+ E  K     T+    E    A+P       D+  +    NP +  
Sbjct: 289 EDLGIEEAGSSSPQPEKQKDDERKTKEKWAETKKWAIPVNVTSPCDD-FYKRIPNPAFQ- 346

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
                + FELD FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIA++ +   R IYTSP
Sbjct: 347 -----WPFELDVFQKQAILRLEQHDSVFVAAHTSAGKTVVAEYAIALSQKHMTRTIYTSP 401

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F DVGL+TGDV +SP +SCL+MTTEILR MLY GSEV++++ WVI
Sbjct: 402 IKALSNQKFRDFKNTFGDVGLLTGDVQISPESSCLIMTTEILRSMLYNGSEVIRDLEWVI 461

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +F+EWI  + K+  +V+ T 
Sbjct: 462 FDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFSEWIGRIKKRHIYVISTM 521

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PL+H+++  G S      ++L++D    F    +    D   K++     ++  A 
Sbjct: 522 KRPVPLEHHLY-TGNSNKTQKEMFLLLDAAGSFLNKGYYAAVDA-RKERTSKHAQSFGAK 579

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
                  +    +    +V  + +R+  PV+ F+FSR  C+++A S+  LD  T  EK  
Sbjct: 580 TSSQNTTASQDRAVWLTLVHFLSQRQQTPVVAFTFSRTRCDENARSLDSLDLTTSVEKAE 639

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +   FQ ++  L   DR LP I LM  LLK+G+AVHHSG+LP++KE+ E+LF  GLVK L
Sbjct: 640 IHSFFQKSLSRLRGGDRQLPQILLMRDLLKKGVAVHHSGILPILKEVTEMLFSRGLVKVL 699

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPA+TVVF +++K DG   R +  GEYIQM+GRAGRRG D  G  II+ 
Sbjct: 700 FATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPGEYIQMAGRAGRRGLDATGTVIILC 759

Query: 483 DEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
              + EM  L  M++GKP  L S FRL+Y  ILNL+
Sbjct: 760 KAGVQEMADLHVMMMGKPTVLHSQFRLTYTMILNLL 795



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/188 (37%), Positives = 115/188 (61%), Gaps = 2/188 (1%)

Query: 767  SRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP 826
            S+VL++L +ID  G VQLKGR +C I + + LL   L  N   + L   + AAL SC + 
Sbjct: 1133 SQVLQQLQYIDGSGAVQLKGRVSCQISSHELLLTELLFEN-ILSPLAPEESAALLSCLVF 1191

Query: 827  VDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCW 886
               +  + ++   L + +QQ+   AR++ E+Q +C +    +E+V    +  L +V+YCW
Sbjct: 1192 TQNTQVEPHITHTLQEGIQQVLAVARRLGELQMDCGIAQTAEEFV-GQFKFGLTEVVYCW 1250

Query: 887  SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
            ++G  FAE+ Q+TD+ EG+++R  +RLDE L ++R AA+ VG+  L  K   AS ++RR 
Sbjct: 1251 ARGMPFAEIAQLTDVQEGTVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRD 1310

Query: 947  IMFSNSLY 954
            I+F+ SLY
Sbjct: 1311 IVFTASLY 1318


>gi|241959260|ref|XP_002422349.1| RNA helicase, putative; antiviral helicase ski2 homologue,
           putative; superkiller protein 2 homologue, putative
           [Candida dubliniensis CD36]
 gi|223645694|emb|CAX40355.1| RNA helicase, putative [Candida dubliniensis CD36]
          Length = 1233

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 235/529 (44%), Positives = 329/529 (62%), Gaps = 46/529 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 276 MARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKCIYTSPI 335

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 336 KALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFV 395

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 396 IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 455

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN-------- 298
             RP PL+  +F    + L+ VVD   +F E+ F K +D FL+   GG ++N        
Sbjct: 456 PKRPVPLE--IFVSAKNQLFKVVDANRKFSENEFRKHKD-FLE---GGGKKNELPSTTMG 509

Query: 299 ---------------------------GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQP 331
                                      G +SG    G  G   +    +V  +      P
Sbjct: 510 SGSRGGPGGTARGGNRGGRGSRGGQGRGNSSGPKRFGRDGPKKNTWIDLVNYMKSNNLLP 569

Query: 332 VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
            +VF FS++ CE++A S+  +DFN   EK  +      AV  L +EDR LP I  +  +L
Sbjct: 570 AVVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLKKEDRELPQILKIREML 629

Query: 392 KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TVVF++++K DG S
Sbjct: 630 GRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVVFSSMRKHDGRS 689

Query: 452 HRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
            R +  GE+ QMSGRAGRRG D  G  I+M  ++ +     K++VLG P  L S FRL+Y
Sbjct: 690 FRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYNDPLSPTDFKEVVLGTPTKLSSQFRLTY 749

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
             ILNL+ R E     E +IK+SF +   +  LP+  K+  +++++  S
Sbjct: 750 SMILNLL-RIEA-LKVEEMIKHSFSENSTQVLLPEHQKRYDEIKKQLQS 796



 Score =  123 bits (308), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 131/222 (59%), Gaps = 10/222 (4%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            ++ E+++L+  + D  ++   D  + R +VL+ +G+ID    V LKGR AC +++G EL+
Sbjct: 1016 LSQEVEKLERLISDENLELLPD-YEQRLQVLEAMGYIDEQHNVVLKGRVACEVNSGWELI 1074

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESARKIA 855
            +TEL+ N    D +  ++ AL SCF+   ++ E+    I  R+E  K   ++ E A K+ 
Sbjct: 1075 ITELVLNNFLADFEPAEIVALLSCFVYEGRTQEEEPPLITPRLEKGK--AKILEIAEKLL 1132

Query: 856  EIQNECKLEVNVDE--YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            ++  E ++ +  +E  +VES  R  L +V+Y W+ G +F E++Q++   EG+I+R   RL
Sbjct: 1133 KVYVEKQVSLTSEEEDFVESK-RFALANVVYEWANGLSFNEIMQISVEAEGTIVRVITRL 1191

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            DE   +++ AA  +G+  L  K A A E ++R I+F  SLYL
Sbjct: 1192 DEICREVKNAALIIGDSTLHLKMAEAQEKIKRDIVFCASLYL 1233


>gi|19075595|ref|NP_588095.1| Ski complex RNA helicase Ski2 (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|74676014|sp|O59801.1|SKI2_SCHPO RecName: Full=Putative ATP-dependent RNA helicase C550.03c
 gi|3136048|emb|CAA19107.1| Ski complex RNA helicase Ski2 (predicted) [Schizosaccharomyces
           pombe]
          Length = 1213

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 233/513 (45%), Positives = 326/513 (63%), Gaps = 24/513 (4%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  + FELD FQ+ ++  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 272 EMALDFPFELDNFQKEAIYHLEMGDSVFVAAHTSAGKTVVAEYAIALAQKHMTKAIYTSP 331

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+   +F+DVG++TGDV ++P  SCL+MTTEILR MLYRG++++++V +VI
Sbjct: 332 IKALSNQKFRDFKHKFEDVGILTGDVQVNPEGSCLLMTTEILRSMLYRGADLIRDVEFVI 391

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LPP + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 392 FDEVHYVNDLERGVVWEEVIIMLPPHVTLILLSATVPNTKEFASWVGRTKKKNIYVISTL 451

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            RP PL+HY++      ++ +VD+  +F  D +    D   K       ++ K S R   
Sbjct: 452 KRPVPLEHYLWV--KQNMFKIVDQHGRFLMDGYKSANDALKKPDKPVIAKDNKNSARGRG 509

Query: 308 G------------GSGSGGS----DIFKIVKMI---MERKFQPVIVFSFSRRECEQHAMS 348
                        G GS  S    D    V +I    ++   PVIVF FS++ CE++  +
Sbjct: 510 AARGRGVQTNMMRGRGSAKSVERRDANTWVHLIGHLHKQNLLPVIVFVFSKKRCEEYVDT 569

Query: 349 MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
           ++  D N  +EK  V  V + AV  L +EDR LP I  M  +L RG+AVHH GLLP+IKE
Sbjct: 570 LTNRDLNNHQEKSEVHVVIEKAVARLKKEDRLLPQIGRMREMLSRGLAVHHGGLLPIIKE 629

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           +VE+LFQ GLVK LFATETFAMG+NMPAK+VVF+  +K DG + R +  GEY Q SGRAG
Sbjct: 630 IVEILFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAG 689

Query: 469 RRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           RRG D  G  II+   ++ +  +L+ M++G  + L+S FRL+Y  ILNL+ R E     E
Sbjct: 690 RRGLDVTGTVIILSRSELPDTASLRHMIMGPSSKLISQFRLTYNMILNLL-RVE-TLRIE 747

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL 560
            +IK SF +   +  +P   +K+   EE+ ++L
Sbjct: 748 DMIKRSFSENVNQTLVPQHEEKIKSFEEKLSAL 780



 Score =  130 bits (327), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 138/261 (52%), Gaps = 3/261 (1%)

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQ 755
            K+ D E  +   +   L++KL  +P+  + +         ++ E+   I  L S + D  
Sbjct: 954  KVRDFEFCEAFEKRNFLQNKLSGNPIISTPNFLTHFALAYQEYELESNIDNLSSYISDQN 1013

Query: 756  IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
            ++   D  + R +VL++LG+IDA+  V LKGR AC I++  EL++TEL+   +  D    
Sbjct: 1014 LELLPD-YEQRIKVLQELGYIDAERTVLLKGRVACEINSTSELVLTELILENSLADFSCE 1072

Query: 816  QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-LEVNVDEYVEST 874
            +  AL S F+  +K+  +  +   L K  + +   A K+ +IQ   + L  N     ES 
Sbjct: 1073 ETIALLSAFVFDEKTEVEPTISPHLQKGKEMILSVAEKVNQIQEHYQVLYFNEGNDFESQ 1132

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
             R  LM+V Y W++G +F  +  +TD+ EGSI+R+  RLDE L + R AA+ VG+ ++  
Sbjct: 1133 PRFGLMEVCYEWARGMSFNRITDLTDVLEGSIVRTIIRLDEVLRECRGAARVVGDSSMYT 1192

Query: 935  KFAAASESLRRGIMFSNSLYL 955
            K       +RR I+F  SLY+
Sbjct: 1193 KMEECQNLIRRNIVFCPSLYM 1213


>gi|254569054|ref|XP_002491637.1| Putative RNA helicase [Komagataella pastoris GS115]
 gi|238031434|emb|CAY69357.1| Putative RNA helicase [Komagataella pastoris GS115]
 gi|328351858|emb|CCA38257.1| antiviral helicase SKI2 [Komagataella pastoris CBS 7435]
          Length = 1233

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/558 (42%), Positives = 339/558 (60%), Gaps = 45/558 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+T+ FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEY IAMA  +  + IYTSP+
Sbjct: 280 MARTWPFELDTFQQEAIYHLEKGDSVFVAAHTSAGKTVVAEYVIAMANINMTKAIYTSPI 339

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+   +F+D  VGL+TGDV ++  A+CL+MTTEILR MLYRG++V+++V +V
Sbjct: 340 KALSNQKFRDFKHDFEDIDVGLITGDVQINQEANCLIMTTEILRSMLYRGADVIRDVEFV 399

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D +RGVVWEE II LP  +K+V LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 400 IFDEVHYVNDIDRGVVWEEVIIMLPEHVKIVMLSATVPNTMEFASWVGRTKQKDVYVIST 459

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI-------------- 292
             RP PL+ +V+    S L+ VVD    F E NF    D  +K K               
Sbjct: 460 PKRPIPLEIFVW--AKSDLFKVVDSNRNFLEKNFQAHSDVLVKPKKEVTGSQAGNRGGRG 517

Query: 293 -------GGRRENGKASGRMAKGGSGSGGSDIFK-----------IVKMIMERKFQPVIV 334
                  GGR  +   S R  +GGS + G+   K           +V+ +      P ++
Sbjct: 518 NARGASRGGRGSSSTVSSR-GRGGSANVGTRFTKRDGPNKKTWTNLVQYLRSHDLLPSVI 576

Query: 335 FSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRG 394
           F FS+  CE++A S+  ++F T  E+  +      AV  L +EDR LP I  M  +L RG
Sbjct: 577 FVFSKARCEEYADSLQGVNFCTGSERSRIHMFIDKAVSRLKKEDRELPQIMKMREMLSRG 636

Query: 395 IAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRY 454
           IAVHH GLLP++KE++E+LF + L+K LFATETFAMGLN+P +TVVF+ ++K DG   R 
Sbjct: 637 IAVHHGGLLPIMKEVIEILFAKTLIKVLFATETFAMGLNLPTRTVVFSELRKHDGTGFRN 696

Query: 455 IGSGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
           +  GE+ QMSGRAGRRG D  G  I+M  +E +E    + + LG P  LVS FRL+Y  I
Sbjct: 697 LLPGEFTQMSGRAGRRGLDTTGTVIVMSYNEPLESKPFQQITLGVPTKLVSQFRLTYNMI 756

Query: 514 LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG-----EAEV 568
           LNL+ R E     E +IK SF +   +  L +  K++ +L+++ A +  +G      A++
Sbjct: 757 LNLL-RIEA-LRVEEMIKRSFSENTTQSGLKENEKEIIELQKKIAEISQAGCQECDPAKL 814

Query: 569 AEYHKLKLDIAQLEKKLM 586
            E+     D  +L  +L+
Sbjct: 815 KEFSTAICDYTKLTGELI 832



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 123/213 (57%), Gaps = 6/213 (2%)

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            LKS + D  +    D  + R +VL +L  +D    V LKGR AC I++G EL +TEL+ +
Sbjct: 1023 LKSLVSDDNMTLLPD-YEQRLKVLNELEFVDDHLNVVLKGRIACEINSGWELALTELLLD 1081

Query: 807  GTFNDLDHHQVAALASCFIPVDKS--SEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
                D D  ++ AL S F+   ++   E+  L   L K   ++++    + EI  + ++ 
Sbjct: 1082 NFLADFDPEEIVALLSAFVYEGRTRDDEEPALTPRLEKGKAKIRDIVSHLLEIFQDKQVS 1141

Query: 865  VNVDE--YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            ++ +E  ++E+  R  L++V+Y W+KG +F+++++++   EG+I+R   RLDE   ++++
Sbjct: 1142 LSAEEESFLEAK-RFNLVNVVYEWAKGTSFSDIMKLSSEAEGTIVRVITRLDEVCREVKS 1200

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            AA  +G+  L  K + A E ++R I+F  SLYL
Sbjct: 1201 AALIIGDSALHDKMSEAQEKIKRDIVFCASLYL 1233


>gi|408395128|gb|EKJ74315.1| hypothetical protein FPSE_05612 [Fusarium pseudograminearum CS3096]
          Length = 1267

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 231/547 (42%), Positives = 333/547 (60%), Gaps = 58/547 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 290 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 349

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 350 IKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADIIRDVEFVI 409

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 410 FDEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTP 469

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF------------VKLQDTFLKQKIGGR 295
            RP PL+HY++   G  ++ +VD +++F E  +             K  +T +  + G  
Sbjct: 470 KRPVPLEHYLW--AGKDIHKIVDSEKKFIEKGWKDAHFAIQGRDKQKPAETTVATRGGNP 527

Query: 296 REN-------------------------------GKASGRMAKGGSGSGGSDIFK----- 319
           R N                                 A G M +GG   G + + +     
Sbjct: 528 RGNQRGGTQRGGRGGGQQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQDKNLW 587

Query: 320 --IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V+ + ++   P  +F FS++ CE++A ++S  DF T  EK  +  + + +V  L  +
Sbjct: 588 VHLVQYLKKQTLLPACIFVFSKKRCEENADALSNQDFCTASEKSHIHMIIEKSVARLKPD 647

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           DR LP I  +  LL RGIAVHH GLLP++KELVE+LF + LVK LFATETFAMGLN+P +
Sbjct: 648 DRQLPQIVRLRELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGLNLPTR 707

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM----VDEQMEMNTLKD 493
           TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    +D+   +  L++
Sbjct: 708 TVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPVADLRN 767

Query: 494 MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
           M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K V   
Sbjct: 768 MILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKDVKLA 825

Query: 554 EEEAASL 560
           + + A +
Sbjct: 826 QADLAKV 832



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 126/218 (57%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I QLK  + D  +Q   D  + R +VLK+LG ID    +QLKG+ AC + +GDEL+
Sbjct: 1051 IKEHISQLKQSLSDQNLQLLPD-YEQRVQVLKELGFIDDATRIQLKGKVACEVHSGDELV 1109

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+ +    D +  ++AAL S F+  +K+  + +L   L +  + +   + K+ ++Q 
Sbjct: 1110 LTELILDNVLADYEPAEIAALLSAFVFQEKTDMEPSLTGNLERGKETIVSISEKVNDVQT 1169

Query: 860  ECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++  + D+  +   RP   LM+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE  
Sbjct: 1170 RLQVIQSADDSNDFVSRPRFGLMEVVYEWARGMSFKNITGLTDVLEGTIVRTITRLDETC 1229

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ VG+  L +K   A E ++R I    SLY+
Sbjct: 1230 REVKNAARIVGDPELYQKMQQAQEMIKRDITAVASLYM 1267


>gi|157137573|ref|XP_001664014.1| helicase [Aedes aegypti]
 gi|108869679|gb|EAT33904.1| AAEL013825-PA [Aedes aegypti]
          Length = 947

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/546 (43%), Positives = 340/546 (62%), Gaps = 28/546 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y FELD FQ+ ++  LE +  V V+AHTSAGKT VAEYAIA++ +   + IYTSP+
Sbjct: 1   MAHKYPFELDIFQKQAIIKLEEHNHVFVAAHTSAGKTVVAEYAIALSKKHMTKTIYTSPI 60

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR+    F+DVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIF
Sbjct: 61  KALSNQKYRDFKTTFQDVGLITGDIQIDPTASCLIMTTEILRSMLYCGSDITRDLEYVIF 120

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D +RG VWEE +I LP  + +V LSAT+ N  +FA W+    K+  +VV T  
Sbjct: 121 DEVHYLTDADRGHVWEEVLILLPDHVCIVMLSATVPNTLEFANWVGKTKKKRVYVVSTPK 180

Query: 249 RPTPLQHYVFP-VGG---SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           RP PL+HY++   GG     L+LVVDEK  F  D + K ++  L       +   K + R
Sbjct: 181 RPVPLEHYLYTGCGGKTKDDLFLVVDEKSNFLMDGYRKAKEAKLA------KNTTKNAVR 234

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             +       +    ++  + + K  PV+ F+ SR  C+ +A ++   D  T  EK  + 
Sbjct: 235 QGQFNQKQEQTLWVGLIHHLEKNKKMPVVAFTLSRNRCDNNANALMSCDLTTPSEKYFIN 294

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
             FQ  +  L   DR LP +  +   L+RGI +HHSG+LP++KE+VE+LF  GLVK LFA
Sbjct: 295 SFFQLCLQKLKPPDRILPQVIQVQNCLQRGIGIHHSGILPILKEIVEMLFARGLVKILFA 354

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM--V 482
           TETFAMG+NMPAKTV+F + KK+DG + R +   EY QM+GRAGRRG D  G  II+  V
Sbjct: 355 TETFAMGVNMPAKTVIFDSTKKFDGQTSRLLQPAEYTQMAGRAGRRGLDKNGTVIIICKV 414

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           D   E + L++M+LGKP  L S FRL+Y  IL L+ R E   T E+++ +SF +F+  + 
Sbjct: 415 DVPSESD-LRNMILGKPMRLESQFRLTYAMILYLL-RVE-LVTVENMMLHSFREFEKRQK 471

Query: 543 LPDIGKKVSKLEEEAASLDASGE--------AEVAEYHKLKLD----IAQLEKKLMSEIT 590
           LP+   ++S++EE+ + L+   E         + A Y+  K D    +  L +K+ +E+ 
Sbjct: 472 LPESKSELSRMEEKISKLNELSEHLKPLCQFYDAAVYYLAKWDEFMPLVFLTQKVSNEM- 530

Query: 591 RPERVL 596
           +P RVL
Sbjct: 531 KPGRVL 536



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 121/222 (54%), Gaps = 8/222 (3%)

Query: 734 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
           F RK +V  ++  LK ++    +  + D   N+ +VL++L +ID    V +KGR AC + 
Sbjct: 720 FDRK-QVEKKLDDLKFQVSYKSMSLYPDYC-NKLKVLQELKYIDDMQQVAMKGRVACEMG 777

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
             +EL++TEL+      DL   ++AAL S  +   K+  +  +   L K     +E    
Sbjct: 778 Q-NELMITELVLRNILTDLQPAEIAALLSSLVFQAKTEVEPKMTETLKKAKVLFEEVEND 836

Query: 854 IAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           I  ++       NV + +E     F L++V+Y W++   FAE++++TDI EG I+R  ++
Sbjct: 837 IRYVEKM----YNVTDILEKDELNFGLIEVVYEWARNKPFAEIMELTDIKEGIIVRCIQQ 892

Query: 913 LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
           L+E L  ++ AA+ +G+  L  K   AS +++R I+F+ SLY
Sbjct: 893 LNETLCNVKDAARIIGDPVLHSKMEEASNAIKRDIVFAASLY 934


>gi|296813017|ref|XP_002846846.1| antiviral helicase SKI2 [Arthroderma otae CBS 113480]
 gi|238842102|gb|EEQ31764.1| antiviral helicase SKI2 [Arthroderma otae CBS 113480]
          Length = 1288

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 230/533 (43%), Positives = 329/533 (61%), Gaps = 54/533 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 315 DMAREYPFELDIFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 374

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 375 IKALSNQKFRDFRGTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 434

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 435 FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTP 494

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKI----GGR-- 295
            RP PL+HY++   G  ++ VVD  ++F E      D+ +  +D    QK     GG+  
Sbjct: 495 KRPVPLEHYLW--AGKEIHKVVDADKRFIEKGWKDADDILSGRDKVKAQKAAEAQGGKQP 552

Query: 296 ----------------------------RENGKASGRMAKGGSGSGGSDIFK-------I 320
                                       + + + +G +A+ G G G +   +       +
Sbjct: 553 ERGRGQNQRGGGQRGTGQRGGPQQRGRGQPSTRGTGNIARTGRGGGRTSAAQDRNVWVHL 612

Query: 321 VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
           V+ + +R+  P  +F FS++ C ++A S+S  DF T  +K  +  + + ++  L  EDR+
Sbjct: 613 VQYLRKREMLPACIFVFSKKRCGENADSLSNQDFCTASDKSAIHMIVEKSLTRLRAEDRD 672

Query: 381 LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
           LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFATETFAMGLN+P +TVV
Sbjct: 673 LPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKILFATETFAMGLNLPTRTVV 732

Query: 441 FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDMVLG 497
           F+  +K DG   R + +GEY QM+GRAGRRG D  G  II+    DE   + TL+ M+LG
Sbjct: 733 FSGYRKHDGRGFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSGRDEAPPITTLRKMILG 792

Query: 498 KPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
            P  L S FRL+Y  +LNL+ R E     E +IK SF +   +  LP+  K+V
Sbjct: 793 DPTKLRSQFRLTYNMMLNLL-RVEA-LKIEEMIKRSFSENATQALLPEHQKQV 843



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 125/219 (57%), Gaps = 3/219 (1%)

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
            +V   I QLK  M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL
Sbjct: 1071 QVKENISQLKQLMSDQNLQLLPD-YEQRIQVLKDLGFVDEACRVQLKGKVACEIHSADEL 1129

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            ++TEL+      D +  ++ AL S F+  +K+  +  L   L    + +   + ++ ++Q
Sbjct: 1130 VLTELILENVLADYEPEEIVALLSAFVFQEKTENEPTLTPRLEAGKEAIIAISNRVNDLQ 1189

Query: 859  NECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             + ++ ++ D+  +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE 
Sbjct: 1190 IQHQVVLSSDDANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDET 1249

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ AA+ VG+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1250 CREVKNAAKLVGDPSLYNKMQLAQEMIKRDVIFAASLYL 1288


>gi|449707823|gb|EMD47410.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
          Length = 1051

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 299/928 (32%), Positives = 478/928 (51%), Gaps = 76/928 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +M + Y FELD FQ+ ++  +E  E V V AHTSAGKTA AEYAI++A     + IYTSP
Sbjct: 70  DMKRKYDFELDTFQKQAIYHMELGEHVFVIAHTSAGKTATAEYAISIAKSKGMKAIYTSP 129

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCL-VMTTEILRGMLYRGSEVLKEVAWV 186
           +KALSNQKY +  + F  VG+MTGDV +      + +MTTEILR  LY+ S+ +++V WV
Sbjct: 130 IKALSNQKYYDFRKIFGKVGIMTGDVVIQGEDDLVTIMTTEILRSKLYQDSKFIEQVDWV 189

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE I+ LP  +KM+ LSAT+ NA  FAEWI     Q   +V T
Sbjct: 190 IFDEVHYVNDEERGVVWEEVIMSLPKHVKMLMLSATVENAINFAEWIGRTKDQRVCLVKT 249

Query: 247 DFRPTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            +RP PL+HYVF        S L L    +  F  +N+ +     + +    RR   +  
Sbjct: 250 LYRPVPLEHYVFCKKKEELPSKLILFKKGENTFLLNNYTEAYQRIVPKFSKNRRVKDQLH 309

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LDFNTQEEKD 361
           G           + I +++  +      P + F FSR+    +A  ++K   F+T   K 
Sbjct: 310 GV----------NSIEELINYLEHDTKLPAVFFIFSRKLVMDYAKKLAKATKFDTNPYK- 358

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +  +F+   + L E ++NLP I  +  LL RGI VHH+GL+P +KE+VE+LF +G +K 
Sbjct: 359 -INSLFKEMTEGLVETEKNLPQISEVKTLLMRGIGVHHAGLIPFLKEIVEVLFSQGDIKV 417

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMG+NMPAK+V+F +V+K+DG  +R++  GEY QM+GRAGRRGKD  G  II 
Sbjct: 418 LFATETFAMGVNMPAKSVIFPSVEKFDGKENRFLLPGEYTQMAGRAGRRGKDAAGNVIIF 477

Query: 482 VDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            ++ +     ++++  G PA ++S F ++Y+ +LN +    G    + ++K+      +E
Sbjct: 478 PNQVLPSPKQMQEISCGAPAKMISQFYITYWMMLNWVCFG-GDSLTQQMMKSYSKIDLFE 536

Query: 541 KA-LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            A   ++ ++  KL +   ++  + E +    + +K ++  ++K++  EI   +    + 
Sbjct: 537 MAQRNNLAEEARKLLQHTTTICENPECDHDALNLIKKEVKDIKKEITREIIEAK----FK 592

Query: 600 G------SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLS 653
           G      +GR+IK R G     +GV++  +   S        +G    +     L S + 
Sbjct: 593 GGNNFNINGRVIKFRAGNEKRYFGVIIEPLDNGSMVYYFDEKKGINEFI-----LFSDM- 646

Query: 654 KIRLSVPPDLRPLDARQSILLAVQELESRFPQGL--------------PKLNPVKDMKIE 699
              +++           +   A+ E+E+   Q L              P   P +  K  
Sbjct: 647 ---IAIYQKQFKAKGGNNYSEAILEIENNQRQALYDRLVGFKKNRGKEPFFQPYQSEKKR 703

Query: 700 DPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK-AEVNHEIQQLKSKMRDSQIQK 758
             E   L+ Q  E    + A P           C   K  E   + Q+   KM D    K
Sbjct: 704 PKEYSSLIQQYNENIKIMKAMP--------AYSCVAYKYGEKEDKAQRQLEKMIDEITGK 755

Query: 759 FR-------DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           ++        EL  R  VLK    +D   ++ LKG+ A  + + D +++T +MF+G  N 
Sbjct: 756 YKMNKERVDRELNLRLEVLKHFNFVDEHNLLTLKGKVAKEMVSSDGMILTNMMFDGVLNR 815

Query: 812 LDHHQVAALASCFI--PVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
           L+ H++AA+ S F+  P ++S E++  +   +    +  + + A +I + ++   LE N+
Sbjct: 816 LEIHEMAAIFSVFVFEPSNESQEELIDHFSYQTKSLMSLVDQYAMEIVDYEDSLNLEYNI 875

Query: 868 DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
           ++YV+      LM+ +  W+    F EVI  +   EG I+R   R+++   ++  AAQ +
Sbjct: 876 EKYVKLNFG--LMEGVALWALRKPFNEVIDSSATTEGLIVRCVLRMEQVCEEVIKAAQII 933

Query: 928 GEVNLEKKFAAASESLRRGIMFSNSLYL 955
           G   L  K       L+R I+   SLYL
Sbjct: 934 GNEELLNKTTQLLGLLKRDIINVKSLYL 961


>gi|168065044|ref|XP_001784466.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663991|gb|EDQ50728.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1364

 Score =  431 bits (1108), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/652 (38%), Positives = 370/652 (56%), Gaps = 86/652 (13%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++A ++ F+LD FQ+ ++  LERNESV V+AHTSAGKT VAEYA A+A +   R +YTSP
Sbjct: 345 DLALSFPFKLDTFQKEAIYHLERNESVFVAAHTSAGKTVVAEYAFALAAKQCTRAVYTSP 404

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQK+R+   +F DVGL+TGDV+L P ASCL+MTTEILR MLY+G+++++++ WVI
Sbjct: 405 IKTISNQKFRDFGGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVI 463

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LPP + +V LSAT+ N  +FA+WI    ++  +V  T 
Sbjct: 464 FDEVHYVNDVERGVVWEEVIIMLPPHVNLVLLSATVPNTFEFADWIGRTKRKLIYVTGTM 523

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ----------------- 290
            RP PL+H ++   G  LY +  E+  F  +   + Q   L +                 
Sbjct: 524 QRPVPLEHCIY--YGGELYKIC-EQSTFLPEGIKEAQKAHLAKTTKQASAGSSVGSASQG 580

Query: 291 ----------------------------KIGGRRENGKASGRMAKG-------GSGSG-- 313
                                       K+GGR+  G  S ++A+G       G G+G  
Sbjct: 581 RGGGTHGRGGGPAGRGGSMPGRGGDNQGKVGGRK--GPTSKQVAQGAIQAAMRGGGTGWR 638

Query: 314 --GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV 371
              S  + ++  +  +   PV+VF FS+  C+Q A S+S +D   Q EK  +    Q A 
Sbjct: 639 SETSQWYTLINNLNSKGLLPVVVFCFSKNRCDQSADSLSSIDLTIQSEKSEIYMFCQKAF 698

Query: 372 DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
             L   DR LP +  +  LLKRGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG
Sbjct: 699 SRLKGSDRRLPQVVRVQELLKRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMG 758

Query: 432 LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNT 490
           +N PA+TV F +++K DG + R I SGEY QM+GRAGRRG D  G  +IM  D+  E   
Sbjct: 759 VNAPARTVAFHSLRKHDGKTFRQILSGEYTQMAGRAGRRGLDKVGTVVIMCWDDIPEEGD 818

Query: 491 LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
           LK ++ G+P  L S FRL+Y  ILNL+ R E     E ++K SF +F  +++LP+  +++
Sbjct: 819 LKRLLTGRPTKLESQFRLTYSMILNLL-RVE-DLKVEDMLKRSFAEFHAQRSLPEQQQQL 876

Query: 551 SKLEEEAASLDAS-----GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
            + E   + ++       GE  + +Y  + L+  +L  K+   + +       L +GR++
Sbjct: 877 LEREGALSKMNVQINCILGEPSIEDYFSVYLEYDKLGDKIQEAVMQSRGGQQALVAGRVV 936

Query: 606 KVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRL 657
            VR            ++V  P+ GV    + G       +LP++  + +  L
Sbjct: 937 LVRN-----------SIVPVPTLGVIVRAATGN-----TKLPIVLAIHRAPL 972



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 161/290 (55%), Gaps = 3/290 (1%)

Query: 668  ARQSILLAVQELESRFP-QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ 726
            A  S +  + +LE  +P Q  P L+ +KD+K  D  VV+   + + L   +  +  +K  
Sbjct: 1070 AYTSTMKELLQLEKEYPGQDPPALDLLKDLKFTDFGVVEAYRKQQALLEIMAQNKCHKCP 1129

Query: 727  DENQIRCFQRKAEVNHE-IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
               +     +   +  E + QLK ++ D+ +Q+  D    R  VL+ +  IDA+ VVQLK
Sbjct: 1130 KLQEHYTLVKNQHILKERVSQLKYELSDAALQQMPD-FGKRIEVLQAVECIDAELVVQLK 1188

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
            GR AC +++ DEL+ TE +F+    DL   +  AL S  +   K + +  L   L +   
Sbjct: 1189 GRVACELNSCDELIATECLFDNQLGDLTPAEAVALLSSLVFQQKDASEPVLTERLEQARD 1248

Query: 846  QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            +L  +A ++  +Q    L ++ ++Y  + ++  LM+V+Y W+KG +FA++ ++T++ EGS
Sbjct: 1249 RLYHTAIRLGNVQKSFDLSLDPEDYARANLKFGLMEVVYEWAKGTSFADICEITNVPEGS 1308

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            I+R+  RLDE   + R AA+ +G+  L +K   AS +++R I+F+ SLY+
Sbjct: 1309 IVRTIVRLDETCREFRNAARLIGDSTLFEKMEQASNAIKRDIVFAASLYV 1358


>gi|67464927|ref|XP_648655.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
 gi|56464881|gb|EAL43268.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 1062

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 299/928 (32%), Positives = 478/928 (51%), Gaps = 76/928 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +M + Y FELD FQ+ ++  +E  E V V AHTSAGKTA AEYAI++A     + IYTSP
Sbjct: 70  DMKRKYDFELDTFQKQAIYHMELGEHVFVIAHTSAGKTATAEYAISIAKSKGMKAIYTSP 129

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCL-VMTTEILRGMLYRGSEVLKEVAWV 186
           +KALSNQKY +  + F  VG+MTGDV +      + +MTTEILR  LY+ S+ +++V WV
Sbjct: 130 IKALSNQKYYDFRKIFGKVGIMTGDVVIQGEDDLVTIMTTEILRSKLYQDSKFIEQVDWV 189

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE I+ LP  +KM+ LSAT+ NA  FAEWI     Q   +V T
Sbjct: 190 IFDEVHYVNDEERGVVWEEVIMSLPKHVKMLMLSATVENAINFAEWIGRTKDQRVCLVKT 249

Query: 247 DFRPTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            +RP PL+HYVF        S L L    +  F  +N+ +     + +    RR   +  
Sbjct: 250 LYRPVPLEHYVFCKKKEELPSKLILFKKGENTFLLNNYTEAYQRIVPKFSKNRRVKDQLH 309

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LDFNTQEEKD 361
           G           + I +++  +      P + F FSR+    +A  ++K   F+T   K 
Sbjct: 310 GV----------NSIEELINYLEHDTKLPAVFFIFSRKLVMDYAKKLAKATKFDTNPYK- 358

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +  +F+   + L E ++NLP I  +  LL RGI VHH+GL+P +KE+VE+LF +G +K 
Sbjct: 359 -INSLFKEMTEGLVETEKNLPQISEVKTLLMRGIGVHHAGLIPFLKEIVEVLFSQGDIKV 417

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMG+NMPAK+V+F +V+K+DG  +R++  GEY QM+GRAGRRGKD  G  II 
Sbjct: 418 LFATETFAMGVNMPAKSVIFPSVEKFDGKENRFLLPGEYTQMAGRAGRRGKDAAGNVIIF 477

Query: 482 VDEQMEM-NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            ++ +     ++++  G PA ++S F ++Y+ +LN +    G    + ++K+      +E
Sbjct: 478 PNQVLPSPKQMQEISCGAPAKMISQFYITYWMMLNWVCFG-GDSLTQQMMKSYSKIDLFE 536

Query: 541 KA-LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            A   ++ ++  KL +   ++  + E +    + +K ++  ++K++  EI   +    + 
Sbjct: 537 MAQRNNLAEEARKLLQHTTTICENPECDHDALNLIKKEVKDIKKEITREIIEAK----FK 592

Query: 600 G------SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLS 653
           G      +GR+IK R G     +GV++  +   S        +G    +     L S + 
Sbjct: 593 GGNNFNINGRVIKFRAGNEKRYFGVIIEPLDNGSMVYYFDEKKGINEFI-----LFSDM- 646

Query: 654 KIRLSVPPDLRPLDARQSILLAVQELESRFPQGL--------------PKLNPVKDMKIE 699
              +++           +   A+ E+E+   Q L              P   P +  K  
Sbjct: 647 ---IAIYQKQFKAKGGNNYSEAILEIENNQRQALYDRLVGFKKNRGKEPFFQPYQSEKKR 703

Query: 700 DPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK-AEVNHEIQQLKSKMRDSQIQK 758
             E   L+ Q  E    + A P           C   K  E   + Q+   KM D    K
Sbjct: 704 PKEYSSLIQQYNENIKIMKAMP--------AYSCVAYKYGEKEDKAQRQLEKMIDEITGK 755

Query: 759 FR-------DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           ++        EL  R  VLK    +D   ++ LKG+ A  + + D +++T +MF+G  N 
Sbjct: 756 YKMNKERVDRELNLRLEVLKHFNFVDEHNLLTLKGKVAKEMVSSDGMILTNMMFDGVLNR 815

Query: 812 LDHHQVAALASCFI--PVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
           L+ H++AA+ S F+  P ++S E++  +   +    +  + + A +I + ++   LE N+
Sbjct: 816 LEIHEMAAIFSVFVFEPSNESQEELIDHFSYQTKSLMSLVDQYAMEIVDYEDSLNLEYNI 875

Query: 868 DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
           ++YV+      LM+ +  W+    F EVI  +   EG I+R   R+++   ++  AAQ +
Sbjct: 876 EKYVKLNFG--LMEGVALWALRKPFNEVIDSSATTEGLIVRCVLRMEQVCEEVIKAAQII 933

Query: 928 GEVNLEKKFAAASESLRRGIMFSNSLYL 955
           G   L  K       L+R I+   SLYL
Sbjct: 934 GNEELLNKTTQLLGLLKRDIINVKSLYL 961


>gi|46111799|ref|XP_382957.1| hypothetical protein FG02781.1 [Gibberella zeae PH-1]
          Length = 1271

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/551 (41%), Positives = 334/551 (60%), Gaps = 62/551 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 290 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 349

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 350 IKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADIIRDVEFVI 409

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 410 FDEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTP 469

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFV------------KLQDTFLKQKIGGR 295
            RP PL+HY++   G  ++ +VD +++F E  +             K  +T +  + G  
Sbjct: 470 KRPVPLEHYLW--AGKDIHKIVDSEKKFIEKGWKDAHFAIQGRDKQKPAETTVATRGGNP 527

Query: 296 RENGK-----------------------------------ASGRMAKGGSGSGGSDIFK- 319
           R N +                                   A G M +GG   G + + + 
Sbjct: 528 RGNQRGGTQRGGPQRGGRGGGQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQD 587

Query: 320 ------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                 +V+ + ++   P  +F FS++ CE++A ++S  DF T  EK  +  + + +V  
Sbjct: 588 KNLWVHLVQYLKKQTLLPACIFVFSKKRCEENADALSNQDFCTASEKSHIHMIIEKSVAR 647

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L  +DR LP I  +  LL RGIAVHH GLLP++KELVE+LF + LVK LFATETFAMGLN
Sbjct: 648 LKPDDRQLPQIIRLRELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGLN 707

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM----VDEQMEMN 489
           +P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    +D+   + 
Sbjct: 708 LPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPVA 767

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
            L++M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K 
Sbjct: 768 DLRNMILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKD 825

Query: 550 VSKLEEEAASL 560
           V   + + A +
Sbjct: 826 VKLAQADLAKV 836



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 126/218 (57%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I QLK  + D  +Q   D  + R +VLK+LG ID    +QLKG+ AC + +GDEL+
Sbjct: 1055 IKEHISQLKQSLSDQNLQLLPD-YEQRVQVLKELGFIDDATRIQLKGKVACEVHSGDELV 1113

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+ +    D +  ++AAL S F+  +K+  + +L   L +  + +   + K+ ++Q 
Sbjct: 1114 LTELILDNVLADYEPAEIAALLSAFVFQEKTDMEPSLTGNLERGKETIVSISEKVNDVQT 1173

Query: 860  ECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++  + D+  +   RP   LM+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE  
Sbjct: 1174 RLQVIQSADDSNDFVSRPRFGLMEVVYEWARGMSFKNITGLTDVLEGTIVRTITRLDETC 1233

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ VG+  L +K   A E ++R I    SLY+
Sbjct: 1234 REVKNAARIVGDPELYQKMQQAQEMIKRDITAVASLYM 1271


>gi|170582192|ref|XP_001896019.1| helicase [Brugia malayi]
 gi|158596865|gb|EDP35135.1| helicase, putative [Brugia malayi]
          Length = 1127

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/485 (45%), Positives = 307/485 (63%), Gaps = 19/485 (3%)

Query: 64  VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVI 123
           V    MA+ Y FELDPFQ+ +V CL+R +SV V+AHTSAGKT VAEYA+A+    K R I
Sbjct: 130 VLKSNMARKYPFELDPFQQQAVVCLDRGDSVFVAAHTSAGKTVVAEYAVALCNLHKTRAI 189

Query: 124 YTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEV 183
           YTSP+KALSNQK+RE    F+DVGL+TGD+ L P A CL+MTTE+LR MLY GSEV++E+
Sbjct: 190 YTSPIKALSNQKFREFKLIFQDVGLITGDIQLHPEAFCLIMTTEVLRSMLYNGSEVIREL 249

Query: 184 AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHV 243
            WVIFDE+HY+ D ERG VWEE +I LP   K+V LSAT+ N  +FA+W+  + K+  +V
Sbjct: 250 EWVIFDEVHYINDAERGHVWEEVLIMLPAHAKIVMLSATVPNCVEFADWVGRIKKKRIYV 309

Query: 244 VYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNF-----VKLQDTFLKQKIG 293
           + T  RP PL+H+++  G  G     ++ ++D   QF +  +      K         +G
Sbjct: 310 IMTARRPVPLEHFLY-TGQDGKTKKDMFKIIDSCGQFVQKGYSLASAAKANIRKASANVG 368

Query: 294 --GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
             G R N K    +    S    +    ++  +  +   PVIVF FSRR C+ +A  +  
Sbjct: 369 PVGYRPNNKILSYLK--NSYDDKNVYITVIDHLRMQNMLPVIVFVFSRRRCDDNAYLLRS 426

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           +D  T++EK ++   F   +  L   D+NLP +  M  L K G A+HHSG+LP++KE+VE
Sbjct: 427 IDLTTEKEKSSIHHFFSRCIARLRGSDKNLPQVLQMKELCKHGFAIHHSGILPILKEVVE 486

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           LLFQ+GLVK LFATETFAMG+NMPA+TV+F +++K DG   R +  GEYIQM+GRAGRRG
Sbjct: 487 LLFQKGLVKVLFATETFAMGVNMPARTVIFDSLQKHDGRQLRLLNPGEYIQMAGRAGRRG 546

Query: 472 KDDRGICIIMVDEQM--EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
            D  G  I++       +   L + + GKP  L S FR++Y  +LNL+ R E   + E V
Sbjct: 547 LDATGSVIVLCKGPYVPDYLDLVNCMQGKPTKLESRFRVTYSMLLNLL-RVE-HLSVEDV 604

Query: 530 IKNSF 534
           ++ S+
Sbjct: 605 LRRSY 609



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 29/282 (10%)

Query: 692  PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC--FQRKAEVNHEIQQLKS 749
            P +D+++ D E+   +  + +L + L    +N +    Q RC  FQ      H+ + L+ 
Sbjct: 852  PGQDIQVNDVEMFQKLRYLNDLRNLL----INDANFACQ-RCSLFQEHFTYIHDKRNLQG 906

Query: 750  KMRDSQIQK------FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            K  + +++          +  +R ++L++L +ID   +V LKGR AC I    ELL+TEL
Sbjct: 907  KCDELRLKLSTGGLLLSQDYSDRIKLLRRLNYIDDSNLVSLKGRVACEIH-HQELLITEL 965

Query: 804  MFNGTFNDLDHHQVAALASCFIPV----------DKSSEQINLRMELAKPLQQLQESARK 853
            M +  F+     ++AA+ S               DK  E I     L +    + E   +
Sbjct: 966  MLDNKFHYRSTAEIAAMLSVTTCQHRLREGECRKDKEGEAIQTPPVLEELKDDIIEVCNR 1025

Query: 854  IAEIQNECKL-EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            I  IQ EC + +V++ E +       LM  +Y W+    FAE++Q+TD  EG I+R  +R
Sbjct: 1026 IGRIQRECGVKDVDISEELSFG----LMHAVYEWASSMPFAEIMQLTDAQEGLIVRCIQR 1081

Query: 913  LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            LDE  + +R AA+ VG+  L +K    S ++RR I+F+ SLY
Sbjct: 1082 LDELCHDIRNAARLVGDPTLYEKMDDTSAAIRRDIVFAASLY 1123


>gi|261192172|ref|XP_002622493.1| DEAD/DEAH box RNA helicase [Ajellomyces dermatitidis SLH14081]
 gi|239589368|gb|EEQ72011.1| DEAD/DEAH box RNA helicase [Ajellomyces dermatitidis SLH14081]
          Length = 1298

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/544 (43%), Positives = 322/544 (59%), Gaps = 65/544 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 333 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 392

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F+DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 393 IKALSNQKFRDFRTTFEDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 452

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 453 FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 512

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKIGGRREN--- 298
            RP PL+HY++      ++ +VD  + F E      D+ +  +D    QK    + N   
Sbjct: 513 KRPVPLEHYLW--ADKSMHKIVDSNKNFIEKGWKKADDILSGRDKLRAQKAAEAQSNTNN 570

Query: 299 ---------------GKASGRMAKGGSGSGGS---------------------------- 315
                          G   G   +GG+   GS                            
Sbjct: 571 RGGHGDRGRGGQPQRGNQRGGAQRGGTQQRGSAQQRGRGQPVSRGTGNIARTGRGGGRTT 630

Query: 316 -----DIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                +I+  +V+ + +    P  +F FS+R CE++A S+S  DF T  EK T+  + + 
Sbjct: 631 VAQDRNIWVHLVQHLRKENLLPACIFVFSKRRCEENADSLSNQDFCTASEKSTIHMIIEK 690

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           ++  L  EDR LP I  +  LL RGI VHH GLLP+IKE+VE+LF + LVK LFATETFA
Sbjct: 691 SLARLKTEDRGLPQIRRVRELLSRGIGVHHGGLLPIIKEIVEILFAKTLVKVLFATETFA 750

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQM 486
           MGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    DE  
Sbjct: 751 MGLNLPTRTVVFSGFRKHDGRSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVASGKDEAP 810

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
              TL+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+ 
Sbjct: 811 PAGTLRRMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEH 868

Query: 547 GKKV 550
            K+V
Sbjct: 869 QKQV 872



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 121/211 (57%), Gaps = 3/211 (1%)

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            LK  M D  +Q   D  + R  VLK LG +D    VQLKG+ AC I + DEL++TEL+  
Sbjct: 1089 LKHLMSDQNLQLLPD-YEQRILVLKDLGFVDEASRVQLKGKVACEIHSADELVLTELILE 1147

Query: 807  GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
              F + +  ++ AL S F+  +K+     L   L K  + + + + K+ + Q + ++ ++
Sbjct: 1148 NVFAEYEPEEIVALLSAFVFQEKTESVPTLTPRLEKGKEAIIKISEKVNDFQIQHQVILS 1207

Query: 867  VDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
             ++  +   +P   L++V+Y W++G +F  +  +TD+ EG+I+R   RLDE   ++++AA
Sbjct: 1208 SEDSNDFASKPRFSLVEVVYEWARGMSFNRITDLTDVMEGTIVRVITRLDETCREVKSAA 1267

Query: 925  QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1268 KLVGDPTLYSKMQQAQELIKRDVIFAASLYM 1298


>gi|326471239|gb|EGD95248.1| DEAD/DEAH box RNA helicase [Trichophyton tonsurans CBS 112818]
          Length = 1292

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/536 (42%), Positives = 323/536 (60%), Gaps = 57/536 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 316 DMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 375

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 376 IKALSNQKFRDFRGTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 435

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 436 FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTP 495

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------------------- 287
            RP PL+HY++   G  +Y +VD +++F E  +    D                      
Sbjct: 496 KRPVPLEHYLW--AGKEIYKIVDSEKRFIEKGWKDADDILSGRDKVKAQKAAEAQAARGG 553

Query: 288 -----------------------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFK----- 319
                                    Q+ G  + + +  G +A+ G G G +   +     
Sbjct: 554 HQSERGRGQGQRGSGQRGTGQRGGPQQRGRGQPSARGIGNIARTGRGGGRTSAAQDRNVW 613

Query: 320 --IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V+ + +R+  P  +F FS++ C ++A S+S  DF T  +K  +  V + ++  L  E
Sbjct: 614 VHLVQYLRKREMLPACIFVFSKKRCGENADSLSNQDFCTAADKSAIHMVVEKSLTRLRVE 673

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           DR+LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFATETFAMGLN+P +
Sbjct: 674 DRDLPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKVLFATETFAMGLNLPTR 733

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
           TVVF+  +K DG   R + +GEY QM+GRAGRRG D  G  II+    DE   +  L+ M
Sbjct: 734 TVVFSGYRKHDGRGFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSGRDEAPPITALRKM 793

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
           +LG P  L S FRL+Y  +LNL+ R E     E +IK SF +   +  LP+  K+V
Sbjct: 794 ILGDPTKLRSQFRLTYNMMLNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQV 847



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 126/219 (57%), Gaps = 3/219 (1%)

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
            +V   I QLK  M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL
Sbjct: 1075 QVKENISQLKMLMSDQNLQLLPD-YEQRIQVLKDLGFVDEASRVQLKGKVACEIHSADEL 1133

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            ++TEL+      + +  ++ AL S F+  +K+  + NL   L    + +   + ++ ++Q
Sbjct: 1134 VLTELILENVLAEYEPEEIVALLSAFVFQEKTENEPNLTPRLEAGKEAIIAISDRVNDLQ 1193

Query: 859  NECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             + ++ ++ D+  +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE 
Sbjct: 1194 IKHQVVLSSDDANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDET 1253

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ AA+ VG+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1254 CREVKNAAKLVGDPSLYNKMQLAQEMIKRDVIFAASLYL 1292


>gi|324500801|gb|ADY40367.1| Helicase SKI2W [Ascaris suum]
          Length = 1321

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/457 (47%), Positives = 300/457 (65%), Gaps = 16/457 (3%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y FELD FQ+ +V C+ER ESV V+AHTSAGKT VAEYA+A++   K RVIYTSP+
Sbjct: 340 MARKYPFELDSFQQQAVVCMERGESVFVAAHTSAGKTVVAEYAVALSNIHKTRVIYTSPI 399

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+    F DVGL+TGD+ L  +A  LVMTTE+LR MLY GSEV++E+ WVIF
Sbjct: 400 KALSNQKFRDFKLVFDDVGLITGDIQLHTDAFALVMTTEVLRSMLYNGSEVIRELEWVIF 459

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERG VWEE +I LP  +K+V LSAT+ N  +FA+W+  +  +  +VV T  
Sbjct: 460 DEVHYINDAERGHVWEEVLIMLPGHVKIVMLSATVPNCIEFADWVGRIKNRKINVVMTSR 519

Query: 249 RPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLK-QKIGGRRENGKAS 302
           RP PL+HY++  G  G     L+ +VD   +F +  +  + D   K +KI        + 
Sbjct: 520 RPVPLEHYLY-TGQDGKTRKDLFKIVDSNGEFIQRGYSLVADAKSKLRKIS-------SG 571

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
            ++ +  S +  +    +++ +  +   P++VF FSRR C+++A  +  +D  T +EK  
Sbjct: 572 AKVYRPNSKTDKNIYINLIEHLRVQNLLPMVVFVFSRRRCDENAALLQSVDLTTAKEKSE 631

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +   F   +D L   D+ LP +  M  L KRG AVHHSG+LP++KE+VELLFQ+G VK L
Sbjct: 632 IHHFFSKCIDRLRGSDKKLPQVLQMAELCKRGFAVHHSGILPILKEVVELLFQKGYVKIL 691

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPA+TVVF +++K DG   R +   EYIQM+GRAGRRG D  G  I++ 
Sbjct: 692 FATETFAMGVNMPARTVVFDSMQKHDGREMRTLSPSEYIQMAGRAGRRGLDSTGTVIVLC 751

Query: 483 D--EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
              +  E   L  M++GKP  L S FR++Y  +LNL+
Sbjct: 752 KGPDAPEPTELTRMMMGKPMKLESRFRVTYSMLLNLL 788



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 162/334 (48%), Gaps = 33/334 (9%)

Query: 644  VQLPLISTLSKIRLSVPPDLR---PLDARQSILLAVQELESRFPQ---GLPKLNPVKDMK 697
            +++ + + ++  RL   P  R   P      ++L +  L  ++ Q   G     P +D++
Sbjct: 994  IKVDIGAVVTDARLRAGPRFRSRSPDPVVMKVILEMDSLSEKWSQNAEGPSVALPGRDVQ 1053

Query: 698  IEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIR-CFQRKAEVNHEIQQLKSKM-RDSQ 755
            I D EV   +  +  + + L  +      D    R C   K  + +  +++  +M RD  
Sbjct: 1054 ITDVEVFGKIAHLNLMRNSLVDY------DRFPCRSCVSFKQHLTNVGERIHLRMERDEL 1107

Query: 756  IQKFR-------DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
            +           DE  +R +VL +LG++D   +V LKG+ AC I    ELLVTELM +  
Sbjct: 1108 LFSLSTGGLLLSDEYCSRIKVLNRLGYVDDSNMVTLKGKVACEIH-HQELLVTELMLDNK 1166

Query: 809  FNDLDHHQVAALASCFIPV--DKSSEQINLRMELAKP--LQQLQ----ESARKIAEIQNE 860
            F      ++AA+ S       +++ + +    E   P  LQQL+    ++A KIA +Q E
Sbjct: 1167 FQTRSTPEIAAMLSAMTCQYKERNGDILKNNSEFTPPAVLQQLKTDVMQAADKIACVQRE 1226

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            C L     E+    +   LM V+Y W+    F++++++TD  EG I+R  +RLDE    +
Sbjct: 1227 CALNA---EHPSEELSFALMHVVYEWANATPFSKIMELTDAQEGLIVRCIQRLDELCKDV 1283

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            R AA+ +G   L +K    S +++R I+F+ SLY
Sbjct: 1284 RNAARLIGNPALYEKMEHISTAIKRDIVFAASLY 1317


>gi|327349799|gb|EGE78656.1| DEAD/DEAH box RNA helicase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1317

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 235/544 (43%), Positives = 322/544 (59%), Gaps = 65/544 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 333 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 392

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F+DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 393 IKALSNQKFRDFRTTFEDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 452

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 453 FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 512

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKIGGRREN--- 298
            RP PL+HY++      ++ +VD  + F E      D+ +  +D    QK    + N   
Sbjct: 513 KRPVPLEHYLW--ADKSMHKIVDSNKNFIEKGWKKADDILSGRDKLRAQKAAEAQSNTNN 570

Query: 299 ---------------GKASGRMAKGGSGSGGS---------------------------- 315
                          G   G   +GG+   GS                            
Sbjct: 571 RGGHGDRGRGGQPQRGNQRGGAQRGGTQQRGSAQQRGRGQPVSRGTGNIARTGRGGGRTT 630

Query: 316 -----DIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
                +I+  +V+ + +    P  +F FS+R CE++A S+S  DF T  EK T+  + + 
Sbjct: 631 VAQDRNIWVHLVQHLRKENLLPACIFVFSKRRCEENADSLSNQDFCTASEKSTIHMIIEK 690

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           ++  L  EDR LP I  +  LL RGI VHH GLLP+IKE+VE+LF + LVK LFATETFA
Sbjct: 691 SLARLKTEDRGLPQIRRVRELLSRGIGVHHGGLLPIIKEIVEILFAKTLVKVLFATETFA 750

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQM 486
           MGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    DE  
Sbjct: 751 MGLNLPTRTVVFSGFRKHDGRSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVASGKDEAP 810

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDI 546
              TL+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+ 
Sbjct: 811 PAGTLRRMILGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEH 868

Query: 547 GKKV 550
            K+V
Sbjct: 869 QKQV 872



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/219 (32%), Positives = 125/219 (57%), Gaps = 3/219 (1%)

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
            +V   I QLK  M D  +Q   D  + R  VLK LG +D    VQLKG+ AC I + DEL
Sbjct: 1100 QVKENISQLKQLMSDQNLQLLPD-YEQRILVLKDLGFVDEASRVQLKGKVACEIHSADEL 1158

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            ++TEL+    F + +  ++ AL S F+  +K+     L   L K  + + + + K+ + Q
Sbjct: 1159 VLTELILENVFAEYEPEEIVALLSAFVFQEKTESVPTLTPRLEKGKEAIIKISEKVNDFQ 1218

Query: 859  NECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             + ++ ++ ++  +   +P   L++V+Y W++G +F  +  +TD+ EG+I+R   RLDE 
Sbjct: 1219 IQHQVILSSEDSNDFASKPRFSLVEVVYEWARGMSFNRITDLTDVMEGTIVRVITRLDET 1278

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              ++++AA+ VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1279 CREVKSAAKLVGDPTLYSKMQQAQELIKRDVIFAASLYM 1317


>gi|326479334|gb|EGE03344.1| DEAD/DEAH box RNA helicase Ski2 [Trichophyton equinum CBS 127.97]
          Length = 1222

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/536 (42%), Positives = 323/536 (60%), Gaps = 57/536 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 246 DMAREYPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALANKHMTKAIYTSP 305

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F DVG++TGD+ ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 306 IKALSNQKFRDFRGTFDDVGILTGDIQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 365

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 366 FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKKKDIYVISTP 425

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------------------- 287
            RP PL+HY++   G  +Y +VD +++F E  +    D                      
Sbjct: 426 KRPVPLEHYLW--AGKEIYKIVDSEKRFIEKGWKDADDILSGRDKVKAQKAAEAQAARGG 483

Query: 288 -----------------------LKQKIGGRRENGKASGRMAKGGSGSGGSDIFK----- 319
                                    Q+ G  + + +  G +A+ G G G +   +     
Sbjct: 484 HQSERGRGQGQRGSGQRGTGQRGGPQQRGRGQPSARGIGNIARTGRGGGRTSAAQDRNVW 543

Query: 320 --IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V+ + +R+  P  +F FS++ C ++A S+S  DF T  +K  +  V + ++  L  E
Sbjct: 544 VHLVQYLRKREMLPACIFVFSKKRCGENADSLSNQDFCTAADKSAIHMVVEKSLTRLRVE 603

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           DR+LP I  +  LL RG+ VHH GLLP++KE+VE+LF +GLVK LFATETFAMGLN+P +
Sbjct: 604 DRDLPQIRKVRELLSRGVGVHHGGLLPIVKEIVEILFAKGLVKVLFATETFAMGLNLPTR 663

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
           TVVF+  +K DG   R + +GEY QM+GRAGRRG D  G  II+    DE   +  L+ M
Sbjct: 664 TVVFSGYRKHDGRGFRDLLAGEYTQMAGRAGRRGLDTVGSVIIVTSGRDEAPPITALRKM 723

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
           +LG P  L S FRL+Y  +LNL+ R E     E +IK SF +   +  LP+  K+V
Sbjct: 724 ILGDPTKLRSQFRLTYNMMLNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQV 777



 Score =  130 bits (326), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 126/219 (57%), Gaps = 3/219 (1%)

Query: 739  EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
            +V   I QLK  M D  +Q   D  + R +VLK LG +D    VQLKG+ AC I + DEL
Sbjct: 1005 QVKENISQLKMLMSDQNLQLLPD-YEQRIQVLKDLGFVDEASRVQLKGKVACEIHSADEL 1063

Query: 799  LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
            ++TEL+      + +  ++ AL S F+  +K+  + NL   L    + +   + ++ ++Q
Sbjct: 1064 VLTELILENVLAEYEPEEIVALLSAFVFQEKTENEPNLTPRLEAGKEAIIAISDRVNDLQ 1123

Query: 859  NECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             + ++ ++ D+  +   +P   LM+V+Y W++G TF  +  +TD+ EG+I+R   RLDE 
Sbjct: 1124 IKHQVVLSSDDANDFASKPRFNLMEVVYEWARGMTFNRITDLTDVMEGTIVRVISRLDET 1183

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              +++ AA+ VG+ +L  K   A E ++R ++F+ SLYL
Sbjct: 1184 CREVKNAAKLVGDPSLYNKMQLAQEMIKRDVIFAASLYL 1222


>gi|255727753|ref|XP_002548802.1| antiviral helicase SKI2 [Candida tropicalis MYA-3404]
 gi|240133118|gb|EER32674.1| antiviral helicase SKI2 [Candida tropicalis MYA-3404]
          Length = 1247

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 231/532 (43%), Positives = 321/532 (60%), Gaps = 48/532 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 280 MARTWPFELDTFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKCIYTSPI 339

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 340 KALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFV 399

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 400 IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 459

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN-------- 298
             RP PL+  +F      L+ VVD   +F E+ F K +D     K     ++        
Sbjct: 460 PKRPVPLE--IFISAKKELFKVVDSNRRFMENEFRKHKDLLEAGKKKTELQSITMGSGSR 517

Query: 299 ---------------------------------GKASGRMAKGGSGSGGSDIFKIVKMIM 325
                                            G  SG    G  G   +    +V  + 
Sbjct: 518 GGPGGTARGGNRGGGRGGRGGGSGRGGNQVSRRGNFSGPRRFGNDGPNKNTWIDLVHYLK 577

Query: 326 ERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
                P +VF FS++ CE++A S+  +DFN  +EK  +      AV  L +EDR LP I 
Sbjct: 578 SNNLLPAVVFVFSKKRCEEYADSLKSVDFNNAKEKSEIHMFIDRAVGRLKKEDRELPQIL 637

Query: 386 LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
            +  +L RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TVVF++++
Sbjct: 638 KIRDMLSRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVVFSSMR 697

Query: 446 KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVS 504
           K DG S R +  GE+ QMSGRAGRRG D  G  I+M  ++ +     K++VLG P  L S
Sbjct: 698 KHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVIVMAYNDPLSPTDFKEVVLGTPTKLSS 757

Query: 505 TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
            FRL+Y  ILNL+ R E     E +IK+SF +   +  LP+  KK  ++ ++
Sbjct: 758 QFRLTYNMILNLL-RIEA-LKVEEMIKHSFSENSTQVLLPENQKKYDQVTKQ 807



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 132/234 (56%), Gaps = 10/234 (4%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            +N    +  +  +  E+++LK  + D  +    D  + R +VL+ +G+ID    V LKGR
Sbjct: 1018 KNHYAEYHERYLLTQEVEKLKRLISDENLDLLPD-YEQRLQVLETMGYIDNQHNVVLKGR 1076

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKP 843
              C I++G EL++TEL+ +    D +  ++ AL SCF+   ++ E     I  R+E  K 
Sbjct: 1077 VGCEINSGWELIITELVLDNFLGDFEPAEIVALLSCFVYEGRTQEDEPPLITPRLEKGKA 1136

Query: 844  LQQLQESARKIAEIQNECKLEVNVDE--YVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
              ++ E A K+ ++  E ++ +  +E  +VES  R  L++V+Y W+ G +F E++Q++  
Sbjct: 1137 --RILEIAEKLLKVYVEKQVLLTQEEEDFVESK-RFALVNVVYEWANGLSFNEIMQISVE 1193

Query: 902  FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             EG+I+R   RLDE   +++ AA  +G+  L  K A A E ++R I+F  SLYL
Sbjct: 1194 AEGTIVRVITRLDEICREVKNAALIIGDSTLHLKMAEAQEKIKRDIVFCASLYL 1247


>gi|392578706|gb|EIW71834.1| hypothetical protein TREMEDRAFT_27449 [Tremella mesenterica DSM
           1558]
          Length = 1283

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/614 (39%), Positives = 352/614 (57%), Gaps = 76/614 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA+ Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 283 EMARQYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRAIYTSP 342

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+    F    VG++TGDV ++P  SCL+MTTEILR MLY+G++++++V +
Sbjct: 343 IKALSNQKFRDFKNSFDPSTVGILTGDVQINPEGSCLIMTTEILRSMLYKGADLIRDVEF 402

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 403 VIFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 462

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------- 297
           T  RP PL+HY++   G  L+ +V+ K  F    +    ++ LK+K    RE        
Sbjct: 463 TPMRPVPLEHYLY--AGKELHKIVNSKSLFLSSGYTSASES-LKRKQDKERELAGLPPLS 519

Query: 298 --NGKA----------SGRMA------------KGGSGSGGSDIFKI------------- 320
             NG+           +G+ A              G G  GS I  +             
Sbjct: 520 KTNGRGQSTTKPKDLPTGKSAPFTKIGAGRTHLNRGGGPNGSSIHTVNPTVKHSNAPLGK 579

Query: 321 -------------------VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
                              V  + +    PV+ F FS+++CE++A S+S LD   Q+EK 
Sbjct: 580 GGGFGRSKGQLDQNVWTHLVNHLKKGNLLPVVNFVFSKKKCEEYAGSLSALDLCNQKEKS 639

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            V   ++ A++ L   D+ LP I  M  L+ RGI VHH GLLP++KE+VE+LF  GLVK 
Sbjct: 640 EVHLTWEKALNRLKGTDKVLPQILRMRDLMSRGIGVHHGGLLPLVKEIVEILFSRGLVKV 699

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMG+NMPAK+VVF+ ++K DG S R +  GEY QM+GRAGRRG D  G  II+
Sbjct: 700 LFATETFAMGVNMPAKSVVFSGIRKHDGQSFRNLLPGEYTQMAGRAGRRGLDTTGTVIIL 759

Query: 482 V-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           V DE    + L++M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +
Sbjct: 760 VGDELPTQHELQEMMLGVPNRLTSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENAAQ 817

Query: 541 KALPDIGKKVSKLEEEAASLDA----SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVL 596
           K  P+  ++V++ E+  A L      +   +++ ++ +   + + +  L+   +      
Sbjct: 818 KLAPEQQRQVAQTEKRLARLPKLTCETCLPDISPFYDISAQVVRTQASLLRMASWAPAGG 877

Query: 597 YYLGSGRLIKVREG 610
                GR++ +R G
Sbjct: 878 KIFAPGRVVVLRNG 891



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 119/229 (51%), Gaps = 16/229 (6%)

Query: 729  NQIRC-----FQRKAEVNHEIQ-------QLKSKMRDSQIQKFRDELKNRSRVLKKLGHI 776
            N++ C     F+    + HEI+       QLK  + D  ++   D  ++R  VLK+L  I
Sbjct: 1034 NKMGCRQCPDFEEHYAMQHEIKLVEASLTQLKLLLSDQNLELLPD-YESRVEVLKRLQFI 1092

Query: 777  DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL 836
            D +  V LKGR AC I++  EL++TEL+      D    +V AL S F+ V+K+     +
Sbjct: 1093 DENSTVLLKGRVACEINSAHELILTELILENALADYTPQEVVALLSVFVFVEKTDVIPQI 1152

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
               L   L  +   A ++   Q+ C  +V  D + E   +  L++V+Y W++G  F ++ 
Sbjct: 1153 PQNLKAGLDVIYRLAGEVEREQDAC--QVQYDSF-EEKFKTGLVEVVYEWARGMPFQQIT 1209

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            ++TD+ EG+I+R   RLDE   ++R AA+ +G+  L  K   A   ++R
Sbjct: 1210 ELTDVQEGTIVRVITRLDETCREVRDAARVIGDTELFNKMEEAQGLIKR 1258


>gi|342320614|gb|EGU12553.1| Translation repressor [Rhodotorula glutinis ATCC 204091]
          Length = 1271

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 245/589 (41%), Positives = 351/589 (59%), Gaps = 60/589 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ Y FELD FQ+ ++  +E  ESV V+AHTSAGKT VAEYAI +A +   R IYTSP
Sbjct: 287 DMAREYPFELDTFQKEAIYHMEVGESVFVAAHTSAGKTVVAEYAITLAQKHMTRAIYTSP 346

Query: 128 LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+  + F+  +VG++TGDV ++P ASCL+MTTEILR MLY+G++++++V W
Sbjct: 347 IKALSNQKFRDFQRTFEPSEVGILTGDVQINPEASCLIMTTEILRSMLYKGADLIRDVEW 406

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 407 VIFDEVHYVNDLERGVVWEEVIIMLPDHVGIILLSATVPNTKEFADWVGRTKKKDIYVIS 466

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG------ 299
           T  RP PL+H+++   G  L+ +VD K QF      +  +   +++   R   G      
Sbjct: 467 TPKRPVPLEHFLY--SGKELHKIVDSKGQFLGAGHKEATEAIRRKQDKEREAAGLGPPTR 524

Query: 300 ------------------------------KASGRMA---KGGSG--------SGGSDIF 318
                                          A G MA   + G+G        S  ++++
Sbjct: 525 GGAAAGGRGGARGGAGGGSNRGGGAAARQVAARGAMAAQRRAGTGPLNRMNNQSRDANLW 584

Query: 319 -KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V ++ +++  PV+VF+FS++ CE++A SM   D  T  EK  V    + A+  L   
Sbjct: 585 IHLVGLLRKKELLPVVVFTFSKKRCEEYASSMPNTDLCTAAEKSEVHITVERALTRLKGS 644

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           D+ LP I+ M  LL RG+ VHH GLLP+I   VELLF  GLVK LFATETFAMG+NMPAK
Sbjct: 645 DKLLPQIQNMRMLLSRGVGVHHGGLLPII---VELLFARGLVKVLFATETFAMGVNMPAK 701

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVL 496
            VVF++++K DG + R +  GEY QMSGRAGRRG D  G+ II  D  + + NTL  M+L
Sbjct: 702 CVVFSSIRKHDGRNFRELLPGEYTQMSGRAGRRGLDKTGVVIINADADVPDTNTLSHMLL 761

Query: 497 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
           G+P  L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  +KV++ E E
Sbjct: 762 GQPTKLQSQFRLTYSMILNLL-RVEA-LRVEEMIKRSFSENAAQRLLPEHQQKVAEGENE 819

Query: 557 AASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
              L         +  K   D++Q   +L + +   + VL +  SGR++
Sbjct: 820 LKELRKLPPGPKTDDLKRFYDLSQRIIELNTAVL--DGVLAHPSSGRMM 866



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 118/214 (55%), Gaps = 2/214 (0%)

Query: 743  EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
            +I  L+  + D  ++   D    R  VLK+L  ID +  VQLKGR AC I++ +EL++TE
Sbjct: 1052 KIASLRMALSDQNLELLPD-YGQRIAVLKELQFIDDNSTVQLKGRVACEINSANELVLTE 1110

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+ +  F   +  +V AL S FI  +K+  +  L   L +    +  +  ++  +Q   +
Sbjct: 1111 LILDNVFASYEPEEVVALLSGFIFQEKTDVEPLLTPRLEEGKATILATYDRVVAVQERHR 1170

Query: 863  LEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
                 + +  S    F L +V+Y W++G +F ++ Q+TD+ EG+I+R+  RLDE   ++R
Sbjct: 1171 ANFADEGFNGSGELKFGLTEVVYEWARGMSFHQITQLTDVQEGTIVRAITRLDETCREVR 1230

Query: 922  AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             AA+ VG   L +K   A E +RR ++FS SLY 
Sbjct: 1231 DAARVVGNAELYQKMLKAQEQIRRDVIFSQSLYF 1264


>gi|302884263|ref|XP_003041028.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256721923|gb|EEU35315.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 1270

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/541 (42%), Positives = 326/541 (60%), Gaps = 62/541 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 289 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 348

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 349 IKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 408

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 409 FDEVHYVNDFERGVVWEEVIIMLPEHVSLILLSATVPNTYEFASWVGRTKQKDIYVISTP 468

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF--------LKQKIGGRRENG 299
            RP PL+HY++   G  ++ +VD +++F E  +     T          K  +  R  N 
Sbjct: 469 KRPVPLEHYLW--AGKNIHKIVDSEKKFIEKGWKDAHHTIQGKDKPEAAKTTVATRGGNP 526

Query: 300 K---------------------------------------ASGRMAKGGSGSGGSDIFK- 319
           +                                       A G M +GG   G + + + 
Sbjct: 527 RGNQRGGPQRGGPQRGGRGGGQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQD 586

Query: 320 ------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                 +V+ + ++   P  +F FS++ CE++A ++S  DF    EK  +  + + +V  
Sbjct: 587 KNLWVHLVQFLKKQTLLPACIFVFSKKRCEENADALSNQDFCNATEKSHIHMIIEKSVAR 646

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L  EDR LP I  +  LL RGIAVHH GLLP++KELVE+LF + LVK LFATETFAMGLN
Sbjct: 647 LKPEDRQLPQIIRLRELLSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGLN 706

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM----VDEQMEMN 489
           +P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    +D+   + 
Sbjct: 707 LPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPVA 766

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
            L++M+LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K 
Sbjct: 767 DLRNMILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKD 824

Query: 550 V 550
           V
Sbjct: 825 V 825



 Score =  133 bits (334), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 125/218 (57%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I QLK  + D  +Q   D  + R +VLK+LG ID    +QLKG+ AC I +GDEL+
Sbjct: 1054 IKEHISQLKQSLSDQNLQLLPD-YEQRVQVLKELGFIDEATRIQLKGKVACEIHSGDELV 1112

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+ +    D +  ++AAL S F+  +K+  + +L   L +    +   + K+ ++Q 
Sbjct: 1113 LTELILDNVLADYEPAEIAALLSAFVFQEKTDIEPSLTGNLERGRDTIVAISEKVNDVQT 1172

Query: 860  ECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++  + D+  +   RP   LM+V+Y W++G TF  +  +TD+ EG+I+R+  RLDE  
Sbjct: 1173 RLQVIQSTDDSNDFVSRPRFGLMEVVYEWARGMTFKNITGLTDVLEGTIVRTITRLDETC 1232

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ VG+  L +K   A E ++R I    SLY+
Sbjct: 1233 REVKNAARIVGDPELYQKMQQAQEMIKRDITAVASLYM 1270


>gi|294654755|ref|XP_456821.2| DEHA2A11242p [Debaryomyces hansenii CBS767]
 gi|199429124|emb|CAG84796.2| DEHA2A11242p [Debaryomyces hansenii CBS767]
          Length = 1243

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/591 (40%), Positives = 336/591 (56%), Gaps = 43/591 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ + FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 288 MAREWPFELDTFQQEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMATRNMTKAIYTSPI 347

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 348 KALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFV 407

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 408 IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTYEFANWVGRTKQKDIYVIST 467

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK----------------- 289
             RP PL+ +++      L+  +D   +F +  F K ++   K                 
Sbjct: 468 PKRPVPLEIFIW--AKDHLFKAIDANRKFSDIEFKKHKEILEKGNKKEPPHVTMGAGSRG 525

Query: 290 -------------QKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
                         ++  R     + GR      G   +    +V+ + +    P ++F 
Sbjct: 526 GRGGTARGGNRGGGQVANRGRGNFSGGRGGLTRDGPNKNTWVSLVQYMKQHNLLPAVIFV 585

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FS+++CE+ A ++S +DF    EK  V      AV  L +EDR LP I  +  LL RGIA
Sbjct: 586 FSKKKCEEFADTLSNVDFCNAREKSEVHMFIDRAVSRLKKEDRELPQIIKIRDLLSRGIA 645

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
           VHH GLLP++KE +E+LF   LVK LFATETFAMGLN+P +TVVF   +K DG   R + 
Sbjct: 646 VHHGGLLPIVKECIEILFARSLVKVLFATETFAMGLNLPTRTVVFNTYRKHDGRGFRNLL 705

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIM-VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
            GE+ QMSGRAGRRG DD G  I+M  +E +     KD+ LG P  L S FRL+Y  ILN
Sbjct: 706 PGEFTQMSGRAGRRGLDDTGTVIVMSFNEPLSPTDFKDVTLGTPTKLSSQFRLTYNMILN 765

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE-----AASLDASGEAEVAE 570
           L+ R E     E +IK+SF +   +  LP+    V +L EE                + E
Sbjct: 766 LL-RIEA-LRVEEMIKHSFSENSTQTLLPEHEVTVKRLSEELNETKVEDCSICNLKNIEE 823

Query: 571 YHKLKLDIAQLEKKLMSEITRPERVLYYLGS-GRLIKVREGGTDWGWGVVV 620
            + L  D   L  +++ EI +   V   L   GRL+  R+       G  +
Sbjct: 824 TYNLLTDYENLYGQIVEEIQKSPIVRNTLMRVGRLLCFRDKNDTLRLGFFI 874



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 145/259 (55%), Gaps = 19/259 (7%)

Query: 703  VVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDE 762
            +++ +N++E  E K F         +   +   R+ E+  EI  L+  + D  ++   D 
Sbjct: 998  ILERLNELESFECKNF---------KVHYQQMHRQDEIKSEITTLQRLISDENLELLPD- 1047

Query: 763  LKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALAS 822
             + R  VL+ LG ID +  V LKGR AC +++G EL++TEL+ +    D +  ++ AL S
Sbjct: 1048 YEQRLNVLQSLGFIDKNQNVVLKGRVACEVNSGWELIITELVLDNFLGDFEPEEIVALLS 1107

Query: 823  CFIPVDKSSEQ----INLRMELAKPLQQLQESARKIAEI--QNECKLEVNVDEYVESTVR 876
            CF+   K++E+    I  R+E  K   ++   A K+ ++  +++  L    +E++E   R
Sbjct: 1108 CFVYEGKTNEEEEPPITPRLEKGK--TRILAIAEKLMKVYAEHQVLLTSEEEEFLERK-R 1164

Query: 877  PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
              L++V+Y W++G +F E++QM+   EG+I+R   RLDE   ++++AA  VG+  L  K 
Sbjct: 1165 FALVNVVYEWARGLSFNEIMQMSVEAEGTIVRVITRLDEICREVKSAALIVGDSTLHSKM 1224

Query: 937  AAASESLRRGIMFSNSLYL 955
            + A E ++R I+F  SLYL
Sbjct: 1225 SEAQEKIKRDIVFCASLYL 1243


>gi|388582489|gb|EIM22794.1| antiviral helicase [Wallemia sebi CBS 633.66]
          Length = 1264

 Score =  427 bits (1099), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/534 (43%), Positives = 323/534 (60%), Gaps = 50/534 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  Y F+LD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 288 DMAIKYPFKLDHFQQNAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTRTIYTSP 347

Query: 128 LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKYR+    F    VG++TGDV ++P  SCL+MTTEILR MLY+G++++++V +
Sbjct: 348 IKALSNQKYRDFKTTFDPATVGILTGDVQINPEGSCLIMTTEILRSMLYKGADLIRDVEF 407

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+FDE+HY+ D ERGVVWEE II LP  I ++ LSAT+ NA +FA+W+    ++  +V+ 
Sbjct: 408 VVFDEVHYVNDAERGVVWEEVIIMLPEHINIILLSATVPNAKEFADWVGRTKRKNIYVIS 467

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG-----K 300
           T  RP PL+H++F   G  ++ +VD   +F         D   +++   R   G     K
Sbjct: 468 TPKRPVPLEHHLF--AGKEIHKIVDAGGKFLSSGHRDATDALRRKQDKEREAAGLPPVQK 525

Query: 301 AS------------------GRMAKGGSGSGGSDIFK--------------------IVK 322
           AS                    M   G+    +   K                    +V+
Sbjct: 526 ASGGPRGGGRGGGRGGGRTPANMGATGAHRAINSYNKSQGANRGGGNASSGGNQNHHLVQ 585

Query: 323 MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
            + ++   PV++F+FS+R+CE+HA  +  +D  +  EK  V    + ++  L   D+ LP
Sbjct: 586 YLKKKDLLPVVIFTFSKRKCEEHASGLGGMDLLSAAEKSEVHITVERSISRLRGSDKQLP 645

Query: 383 AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
            I  M  LL RG+AVHH GLLP++KE+VELLF  GLVK LFATETFAMG+NMPA++V F+
Sbjct: 646 QISRMRDLLGRGLAVHHGGLLPIVKEIVELLFGRGLVKVLFATETFAMGVNMPARSVAFS 705

Query: 443 AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAP 501
            ++K DG S R +  GEY QMSGRAGRRG D  G+ IIM ++ + E  TL+ M+LG P  
Sbjct: 706 GIRKHDGKSFRDLLPGEYTQMSGRAGRRGLDATGVVIIMTNDNIPETTTLQQMILGIPGK 765

Query: 502 LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
           L S FRL++  ILNL+ R E     E +IK SF +   ++ LPD  K+V + E+
Sbjct: 766 LNSQFRLTFNLILNLL-RVE-TLKVEDMIKRSFSENASQRLLPDQQKQVEEAEQ 817



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 126/216 (58%), Gaps = 4/216 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            + ++I  L++ + D  ++   D  +NR   LK++ +ID +  VQLKGR AC I++  EL+
Sbjct: 1053 LKNQIAYLRASISDQNLELLPD-YENRINALKEMQYIDQNATVQLKGRVACEINSAHELI 1111

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+    F   +  ++ AL SCF+  +KS  +  +  +L +    +   A ++  +  
Sbjct: 1112 LTELILENVFAAYEPEEMVALLSCFLFHEKSEAEPVIPPKLEEGRDTIFAIADRVQRVLE 1171

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
              K+E    E  E++++  L++V+Y W+KG  F ++ Q+TD+ EG+I+R   RLD+   +
Sbjct: 1172 HNKVE---SEDFETSLKFGLVEVVYEWAKGMPFEQITQLTDVAEGTIVRVITRLDQTCLE 1228

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +R AA+ +G+  L +K  A    ++R I+F+ SLY+
Sbjct: 1229 VRDAARVIGDAALFQKMEACQTMIKRDIIFAASLYV 1264


>gi|150866632|ref|XP_001386296.2| hypothetical protein PICST_85287 [Scheffersomyces stipitis CBS
           6054]
 gi|149387888|gb|ABN68267.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 1239

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/601 (42%), Positives = 355/601 (59%), Gaps = 58/601 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  R IYTSP+
Sbjct: 279 MARTWPFELDTFQKEAVYHLEKGDSVFVAAHTSAGKTVVAEYAIAMASRNLTRTIYTSPI 338

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTE+LR MLYRG++++++V +V
Sbjct: 339 KALSNQKFRDFKETFKDTDVGLITGDVQINPGANCLIMTTEVLRSMLYRGADIIRDVEFV 398

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D +RGVVWEE II LP  IK + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 399 IFDEVHYVNDIDRGVVWEEVIIMLPDHIKYILLSATVPNTFEFANWVGRTKEKDIYVIST 458

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF--LKQKIG----------- 293
             RP PL+  +F      ++ VVD    F ED F K ++     K+K G           
Sbjct: 459 PKRPVPLE--IFISAKDNMFKVVDSHRVFSEDEFKKHKEHLENSKKKPGLPKASMGSGTR 516

Query: 294 -------------------GRRENG----KASGRM-AKGGSGSGGSDIFKIVKMIMERKF 329
                                R  G    +A GR  A+ G   G      +V+ + +   
Sbjct: 517 GGPGGSARGGNRGGRGGQSANRGRGNLVTRAGGRFFAQDGPNKGT--WLNLVQYLKKSNL 574

Query: 330 QPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLP 389
            P + F FS+++CE++A S++ +D  T  EK  +      ++  L +EDR LP I  +  
Sbjct: 575 LPCVAFVFSKKKCEEYADSLTSVDLCTAREKSEIHMFIDKSLFRLKKEDRELPQILKIRE 634

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           +L RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TVVF++++K DG
Sbjct: 635 MLSRGIAVHHGGLLPIVKECIEILFAKTLVKVLFATETFAMGLNLPTRTVVFSSLRKNDG 694

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRL 508
            S R +  GE+ QMSGRAGRRG D  G  I+M  ++ +     K++ LG P  L S FRL
Sbjct: 695 RSFRNLLPGEFTQMSGRAGRRGIDATGTVIVMAYNDPLSPVDFKEITLGTPTKLQSQFRL 754

Query: 509 SYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL-------- 560
           +Y  ILNL+ R E     E +IK+SF +   +  LP+  KKV KL  ++ SL        
Sbjct: 755 TYNMILNLL-RIEA-LPVEEMIKHSFSENSTQVLLPENQKKVDKLLLQSHSLKLTPCEEC 812

Query: 561 DASGEAEVAEYHK-LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV 619
           D  G  E  +  K  ++   QL   L+ E++  +  L  L SGRL+  R+       G +
Sbjct: 813 DLEGIQETYDLMKSYEVLYGQL-TALIHEVSASK--LQILKSGRLVFFRDNNKVVRMGAI 869

Query: 620 V 620
           V
Sbjct: 870 V 870



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 129/224 (57%), Gaps = 8/224 (3%)

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            K ++  EI  L+S + D  ++   D    R +VL+ +G ID    V LKGR AC I++G 
Sbjct: 1019 KNKLEVEIASLQSMISDENLELLPD-YAQRLQVLETMGFIDEQQNVVLKGRVACEINSGW 1077

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESAR 852
            EL+VTEL+ +    D +  ++ AL SCF+   +++E+    IN R+E  K   ++ E   
Sbjct: 1078 ELVVTELVLDNFLGDFEPEEIVALLSCFVYEGRTNEEEPPLINGRLERGK--TRILELTE 1135

Query: 853  KIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
            K+ ++  E ++ +  +E      + F L +V++ W++G +F EV+Q++   EG+I+R   
Sbjct: 1136 KLLDVYGEHQVSLTSEEEEFLDRKRFALTNVVFEWARGLSFNEVMQISPEAEGTIVRVIT 1195

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDE   ++R AA  VG+  L +K + A E ++R I+F  SLYL
Sbjct: 1196 RLDEVCREVRNAALIVGDSTLSQKMSVAQEKIKRDIVFCASLYL 1239


>gi|380494794|emb|CCF32889.1| DSHCT domain-containing protein [Colletotrichum higginsianum]
          Length = 1282

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/571 (42%), Positives = 339/571 (59%), Gaps = 61/571 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ ++  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 306 DMARDWPFELDTFQKEAIYHLESGDSVFVAAHTSAGKTVVAEYAIALASKHMTKAIYTSP 365

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 366 IKALSNQKFRDFRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 425

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 426 FDEVHYVNDFERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKQKDIYVISTP 485

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL---KQKI----------GG 294
            RP PL+HY++   G  ++ +VD  ++F E  + +         K KI          GG
Sbjct: 486 KRPIPLEHYLW--AGKNIHKIVDSDKKFIEKGWKEANQAIQGKDKMKIPESSNAPRGGGG 543

Query: 295 RR---------------------------------ENGKASGRMAK-GGSGSGGSD---I 317
           +R                                  N    GR+ + GG  S   D    
Sbjct: 544 QRGAPRGGIQRGGQRGGQRGGGSQQRGRGGAPRASHNPGHMGRIGRQGGFTSAAQDKNLW 603

Query: 318 FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V+ + +    P  +F FS++ CE++A ++S  DF T  EK  +    + ++  L  E
Sbjct: 604 VHLVQFLKKDNLLPSCIFVFSKKRCEENADALSNQDFCTANEKSAIHMTIEKSIARLKPE 663

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           DR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P +
Sbjct: 664 DRTLPQIIRLRELLSRGIAVHHGGLLPIVKEIVEILFAQTLVKVLFATETFAMGLNLPTR 723

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
           TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+    DE   +  L+ M
Sbjct: 724 TVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGDEAPPVADLQKM 783

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
           +LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K V   E
Sbjct: 784 ILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKAVKISE 841

Query: 555 EEAASL--DASGEAEVA--EYHKLKLDIAQL 581
            + A +  D+ G  +V+  E H+   D  QL
Sbjct: 842 ADLAKIKRDSCGICDVSMDECHQASEDYKQL 872



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 124/218 (56%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I QL+  + D  +Q   D  + R +VLK+L  ID    +QLKG+ AC I +GDEL+
Sbjct: 1066 IKEHISQLRHSLSDQNLQLLPD-YEQRIQVLKQLQFIDESARIQLKGKVACEIHSGDELV 1124

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+ +    D +  ++AAL S F+  +K+  Q NL   L +    +   + K+ E+Q 
Sbjct: 1125 LTELILDNVLADYEPAEIAALLSAFVFQEKTDTQPNLTGNLERGKDTIIAISEKVNEVQT 1184

Query: 860  ECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++  + D+  +   RP   LM+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE  
Sbjct: 1185 LHQVIQSADDSNDFISRPRFGLMEVVYEWARGMSFKNITDLTDVLEGTIVRTITRLDETC 1244

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ +G+  L +K   A E ++R I    SLY+
Sbjct: 1245 REVKNAARIIGDPELYQKMQTAQEMIKRDITAVASLYM 1282


>gi|310791331|gb|EFQ26860.1| DSHCT domain-containing protein [Glomerella graminicola M1.001]
          Length = 1288

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/571 (41%), Positives = 339/571 (59%), Gaps = 61/571 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ ++  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 312 DMARDWPFELDTFQKEAIYHLESGDSVFVAAHTSAGKTVVAEYAIALASKHMTKAIYTSP 371

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F++VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 372 IKALSNQKFRDFRQTFEEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 431

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 432 FDEVHYVNDFERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKQKDIYVISTP 491

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF-------------------- 287
            RP PL+HY++   G  ++ +VD +++F E  + +                         
Sbjct: 492 KRPIPLEHYLW--AGKNIHKIVDSEKKFIEKGWKEANQAIQGRDKTKALEPSNTPRGGGG 549

Query: 288 ----------------------LKQK-IGGRRENGKASGRMAK----GGSGSGGSD---I 317
                                 L+Q+  GG        G M +    GG  S   D    
Sbjct: 550 QRGVQRGGPQRGGQRGGPRGGSLQQRGRGGAPRASHNPGHMGRTGRQGGFTSAAQDKNLW 609

Query: 318 FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
             +V+ + +    P  +F FS++ CE++A ++S  DF T  EK  +    + ++  L  E
Sbjct: 610 VHLVQFLKKSNLLPSCIFVFSKKRCEENADALSNQDFCTANEKSAIHMTIEKSIARLKPE 669

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           DR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN+P +
Sbjct: 670 DRCLPQIIRLRELLSRGIAVHHGGLLPIVKEIVEILFAQTLVKVLFATETFAMGLNLPTR 729

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKDM 494
           TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G+ II+    DE   +  L+ M
Sbjct: 730 TVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDTVGLVIIVPPGGDEAPPVADLQKM 789

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
           +LG+P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K V   E
Sbjct: 790 ILGEPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKAVKLSE 847

Query: 555 EEAASL--DASGEAEVA--EYHKLKLDIAQL 581
            + A +  D+ G  +V+  E H+   D  QL
Sbjct: 848 ADLAKIKRDSCGICDVSMDECHQASEDYKQL 878



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 124/218 (56%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I QL+  + D  +Q   D  + R +VLK+L  ID    +QLKG+ AC I +GDEL+
Sbjct: 1072 IKEHISQLQHSLSDQNLQLLPD-YEQRIQVLKQLQFIDESARIQLKGKVACEIHSGDELV 1130

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+ +    D +  ++AAL S F+  +K+  Q NL   L +    +   + K+ E+Q 
Sbjct: 1131 LTELILDNVLADYEPAEIAALLSAFVFQEKTETQPNLTGNLERGKDTIIAISEKVNEVQT 1190

Query: 860  ECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++  + D+  +   RP   LM+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE  
Sbjct: 1191 LHQVIQSADDSNDFISRPRFGLMEVVYEWARGMSFKNITDLTDVLEGTIVRTITRLDETC 1250

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ +G+  L +K   A E ++R I    SLY+
Sbjct: 1251 REVKNAARIIGDPELYQKMQTAQEMIKRDITAVASLYM 1288


>gi|398406240|ref|XP_003854586.1| hypothetical protein MYCGRDRAFT_99415 [Zymoseptoria tritici IPO323]
 gi|339474469|gb|EGP89562.1| hypothetical protein MYCGRDRAFT_99415 [Zymoseptoria tritici IPO323]
          Length = 1263

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 246/621 (39%), Positives = 347/621 (55%), Gaps = 81/621 (13%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 280 EMARDWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 339

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+   EF DVG++TGDV + P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 340 IKALSNQKFRDFRTEFDDVGILTGDVQIRPEASCLIMTTEILRSMLYRGADLIRDVEFVI 399

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 400 FDEVHYVNDSERGVVWEEVIIMLPEHVTLIMLSATVPNTYEFASWVGRTKQKDIYVISTP 459

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL-KQKIGGRRENGK------ 300
            RP PL+HY++      ++ +VD  + F E  +    D    K KI    +  K      
Sbjct: 460 KRPVPLEHYLW--ADKKMFKIVDSTKHFIEKGWKDANDAMSGKDKILAAEQKAKEKEDTA 517

Query: 301 -------------------------------ASGRMAKGGSGSGG--------------- 314
                                            GR      G G                
Sbjct: 518 AAVGRGGRGGRGQAPRGGQQRGGGNQRGGPQQRGRGQPATRGQGNIARTGRGGGRTTAAQ 577

Query: 315 -SDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
             +I+  +V+ + + +  P  +F FS++ CE++A ++S LDF T  EK  +  + + ++ 
Sbjct: 578 DRNIWVHLVQHLRKEELLPCCIFVFSKKRCEENADALSNLDFCTATEKSAIHMILEKSLA 637

Query: 373 CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
            L  +DR LP I  +  LL RGIAVHH GLLP++KE VE+LF + LVK LFATETFAMGL
Sbjct: 638 RLKPDDRQLPQIRRLRELLSRGIAVHHGGLLPIVKECVEILFAKTLVKVLFATETFAMGL 697

Query: 433 NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMN 489
           N+P +TVVF+  +K+D  S R +  GEY QM+GRAGRRG D  G  II+    DE     
Sbjct: 698 NLPTRTVVFSGFRKYDNKSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVTPGGDEAPPAG 757

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
            L+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K+
Sbjct: 758 RLRQMMLGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEKQ 815

Query: 550 VSKLEEEAA------------SLDASGEAEVAEYHKLKLD--IAQLEKKLMSEITRPERV 595
           +   E + A             +DA  EA V  Y +L  D  +A L   +   + +P+R+
Sbjct: 816 IKLSEADLAKVTRESCNTCDKDIDACQEASV-NYQRLTADLHLAMLSTPVGRRMFQPKRI 874

Query: 596 LYYLGSGRL----IKVREGGT 612
           + + G        + +REG +
Sbjct: 875 IVFRGKNNARTAGVLLREGAS 895



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +  +I  ++  M D  +Q   D  + R  VLK LG ID    V+LKG+ AC I + DEL+
Sbjct: 1047 IRDKIDSIRQLMSDQNLQLLPD-YEQRICVLKDLGFIDDQTRVELKGKVACEIHSADELV 1105

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+      D +  ++ AL S F+  +K+    N+   L K ++ + + + K+   Q 
Sbjct: 1106 LTELVLENVLADYEPEEIVALLSSFVFQEKTDITPNITPALEKGMETIVKISEKVNHYQT 1165

Query: 860  ECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++ ++ D+  +   RP   L++V+Y W++G  F+++  +TD+ EG+I+R   RLDE  
Sbjct: 1166 LHQVILSADDSNDFVSRPRFGLVEVVYEWARGMPFSKITDLTDVLEGTIVRVITRLDETC 1225

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ +G+  L  K     E ++R I  + SLY+
Sbjct: 1226 REVKNAARIIGDPTLFTKMQTCQELIKRDICATASLYM 1263


>gi|440798984|gb|ELR20045.1| hypothetical protein ACA1_113910 [Acanthamoeba castellanii str.
           Neff]
          Length = 1345

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 244/550 (44%), Positives = 335/550 (60%), Gaps = 31/550 (5%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y F+LD FQ+ +V  LE  ESV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 393 EMALEYPFDLDVFQKRAVCHLENGESVFVAAHTSAGKTVVAEYAIALASKHMTRTIYTSP 452

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYR+  + F DVGL+TGDV++ P ASCL++TTEILR MLYRG++++++V WVI
Sbjct: 453 IKALSNQKYRDFKETFGDVGLITGDVSIKPEASCLILTTEILRSMLYRGADLIRDVEWVI 512

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+WI    K+   V+ T+
Sbjct: 513 FDEVHYVNDIERGVVWEEVIIMLPDHVNLILLSATVPNTLEFADWIGRTKKKNIFVITTN 572

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            RP PL+HY++    +  Y +VD +  F       L   +       +++  K++G  AK
Sbjct: 573 KRPVPLEHYLWV--SNERYKIVDNRSNF-------LMGGYQSAMQAAKQKQTKSAGATAK 623

Query: 308 GGSGSG-GSDIFKIVKMIMERKFQ---PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
               SG      K VKMI + + +   PV+VF+FS+++CE  A  ++  D  T  EK  +
Sbjct: 624 AARASGVKQQRTKWVKMIDQLRVKGLLPVVVFAFSKKKCEDVAHGLTSTDLTTSVEKHEI 683

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               + A+D L   DR LP +  +  LLKRGI VHH GLLP+IKE+VE+LF  G +K LF
Sbjct: 684 HVFMEAALDRLKGPDRKLPQVLRIKDLLKRGIGVHHGGLLPIIKEMVEILFGRGKIKVLF 743

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATETFAMG+NMPA+TVVF  V+K DG + R +           AGRRG D  G  IIM  
Sbjct: 744 ATETFAMGVNMPARTVVFENVQKHDGRAFREL----------HAGRRGLDTVGTVIIMTK 793

Query: 484 EQM--EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           E        L+ M+LGKP  L S FRL+Y  ILNL+ R E  F  E ++K SF +F  ++
Sbjct: 794 EDKFPPSAGLQTMILGKPQKLESQFRLTYNMILNLL-RVE-DFKVEDMMKRSFSEFFTQR 851

Query: 542 ALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
            LP   +K+   E + + L       GE ++  Y++L     QL+ +    I   +    
Sbjct: 852 TLPQQRQKLILDEAKLSGLQDLECLFGEPDIENYYQLASQKKQLDAECQRTIMASKVAQA 911

Query: 598 YLGSGRLIKV 607
            LG+GR++ +
Sbjct: 912 ALGAGRVVWI 921



 Score =  132 bits (333), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 154/272 (56%), Gaps = 8/272 (2%)

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLF---AHPLNKSQDENQIRCFQRKAEVNHE 743
            L  L+PV+D KI D E  D   + E +  ++     H   K ++  Q    +++ ++  E
Sbjct: 1075 LETLHPVRDFKINDLEFADKWMRRERMLERMKQSKCHTCPKLKE--QYVAMEQRQKLVDE 1132

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT-GDELLVTE 802
            I +L+  + +  +Q    E + R  VL+ L ++D +  VQLKGR A  I+T  DEL+ TE
Sbjct: 1133 ISELRRNLSNENLQ-LMPEFQQRVSVLRFLNYVDDNNAVQLKGRVAREINTVKDELIATE 1191

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            L+F     +L   ++ AL S  +   K+  ++ L   L +   ++ E   ++ +IQ EC 
Sbjct: 1192 LIFENALTELPAEEIIALFSALVFELKTDVEVKLGGTLEEGRLKMLEIGERLFDIQTECG 1251

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            L+++  +Y+++ +   L++V+Y W++G  FA++  +TD+ EGSI+R+  RLDE   +++ 
Sbjct: 1252 LDLSRHDYLKN-LNFGLVEVVYEWARGMPFADITGLTDVAEGSIVRTIVRLDETCKEIKN 1310

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            AA+ +G+  L  K   AS  ++R I+F++SLY
Sbjct: 1311 AARIIGDSRLYVKMEEASRLVKRDIVFASSLY 1342


>gi|383859905|ref|XP_003705432.1| PREDICTED: helicase SKI2W [Megachile rotundata]
          Length = 1223

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 230/550 (41%), Positives = 343/550 (62%), Gaps = 14/550 (2%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E+A ++S+ELD FQ+ ++  LE N +V V+AHTSAGKT VAEYAIA++ +   RVIYTSP
Sbjct: 276 ELAMSFSYELDTFQKQAILKLEENCNVFVAAHTSAGKTTVAEYAIALSQKHMTRVIYTSP 335

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYRE  ++F  VGL+TGD+ ++ NASCL+MTTEIL+ MLY  SEVL+++ +VI
Sbjct: 336 IKALSNQKYREFKRKFDSVGLLTGDLQINSNASCLIMTTEILQSMLYGASEVLRDLEFVI 395

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ + ERG VWEES+I LP  + +V LSAT+ N+  FA+W+ H  K+  +V+ T 
Sbjct: 396 FDEVHYINNDERGHVWEESVILLPETVTIVMLSATVPNSIIFADWVGHTKKKKMYVISTL 455

Query: 248 FRPTPLQHYVFPVGGSGL-----YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PLQHY++  G  G      +LVVDE+  F  D + +  +    +     ++  K  
Sbjct: 456 KRPVPLQHYLY-TGTDGKTQNDKFLVVDERGLFLLDGWYRAVNAKDAKSQNTNKDIKKK- 513

Query: 303 GRMAKGGSGSGGSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            R+    +      ++   +  +      PV+VF  SR+ C+  A+ +  ++  T+ EK 
Sbjct: 514 -RLPPQMTPKQEQVLWSAFINHLKSNNLLPVVVFMLSRKRCDMSAVILRNVELTTETEKH 572

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +   FQN +  L   DR LP + +M  LL+ GI +HHSG+LP++KE+VE+LFQ G+VK 
Sbjct: 573 AIRTFFQNNIRHLKGSDRELPQVLMMQELLQNGIGIHHSGILPILKEIVEMLFQNGVVKL 632

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMG+NMPA+TVVF ++KK+DG + R +   EYIQM+GRAGRRG D  G+ IIM
Sbjct: 633 LFATETFAMGVNMPARTVVFDSIKKYDGTNFRILHPTEYIQMAGRAGRRGHDTAGMVIIM 692

Query: 482 VDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
               +   N LK M+ G+   L S F+++Y  +LNL  R     T E +++ SF +    
Sbjct: 693 CRTAVPHFNELKTMMCGQAQNLESKFKVTYSMVLNL-RRLNESVTVEGMMRRSFKESPVT 751

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAE--VAEYHKLKLDIAQLEKKLMSEIT-RPERVLY 597
                   ++ KLE+E A L    + +  ++E++++  D  +  K L   I  + ++ + 
Sbjct: 752 LKQNAYKTELQKLEDELAQLPPLNDVQKKLSEFYQVATDYLEYLKYLKPYICEKQKKAVK 811

Query: 598 YLGSGRLIKV 607
            L  GR++ +
Sbjct: 812 NLVPGRVLLI 821



 Score =  104 bits (259), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 26/274 (9%)

Query: 690  LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKS 749
            L P  DMK+      D+  +++   H L    L       +I  F+ + E   E  +L++
Sbjct: 964  LQPYTDMKLN----YDINMKVQ---HLLDLKKLVYDMKCTEISNFEEQFETVFERSELEN 1016

Query: 750  KMRDSQIQ------KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            + R  Q+Q          E  N   +L+ LG+I+ +  V LKGR A  + + +ELL+TEL
Sbjct: 1017 QKRKIQLQLSDEGMSLYPEYTNAVALLRDLGYINENETVALKGRVALQMGS-NELLITEL 1075

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +       L   ++AAL S  I   ++     L  +L K  + L+E+  ++  ++   +L
Sbjct: 1076 ILKNVLTVLQPAEIAALLSSVIFQQRTDATPELTPDLEKSCEVLKETYAELETLEQHYQL 1135

Query: 864  EVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
                     ST++P    L++V+Y W+K  +FAE+++ TD+ EG I+R  ++L E L  +
Sbjct: 1136 ---------STLQPLNFGLVEVVYDWAKAKSFAEIMEKTDVQEGIIVRCIQQLSETLRDV 1186

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + AA  +G+  L++K   A  +++R I+F+ SLY
Sbjct: 1187 KNAAVTIGDPVLKEKMEEACTAIKRDIVFAASLY 1220


>gi|403214546|emb|CCK69047.1| hypothetical protein KNAG_0B06170 [Kazachstania naganishii CBS
           8797]
          Length = 1283

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/596 (39%), Positives = 349/596 (58%), Gaps = 59/596 (9%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+SFELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 314 ARTWSFELDTFQKEAIFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAKRNMTKTIYTSPIK 373

Query: 130 ALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           ALSNQK+R+  + F+D  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 374 ALSNQKFRDFKETFEDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 433

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 434 FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFATWIGRTKQKNIYVISTP 493

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            RP PL+  ++  G   +  V+    +F E NF K +D     K     +N    G  A 
Sbjct: 494 KRPVPLEVNIWAKG--QMIPVISPAREFLETNFNKHKDLLSGTKADATPQNNSRGGAQAG 551

Query: 308 GGS-------------------------------------GSGGSDIFK----------- 319
            G+                                     GS     F+           
Sbjct: 552 RGNGKPGAGRGGARGGARGGARGGGRGGRGGNGSRGAGAIGSNRRQFFQRSAPSKKTWPE 611

Query: 320 IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
           +V  +  +   P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR
Sbjct: 612 LVNYLRSKDLLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIYMFIEKSITRLRKEDR 671

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
            LP I  +  LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV
Sbjct: 672 ELPQILKIRSLLERGIAVHHGGLLPIVKELIEILFAKGFIKVLFATETFAMGLNLPTRTV 731

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGK 498
           VF+ ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M   E ++  + K++ LG 
Sbjct: 732 VFSEIRKHDGNGLRDLTPGEFTQMAGRAGRRGLDKTGTVIVMAYSEPLQKGSFKEVSLGV 791

Query: 499 PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
           P  L S FRL+Y  ILNL+ R E     E +IK SF +   + + P+  KK+ KL+ E  
Sbjct: 792 PTKLQSQFRLTYNMILNLL-RIEA-LKVEEMIKYSFSENTNQTSHPEHEKKIKKLQVELE 849

Query: 559 SLDASG----EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG 610
           +++         ++  +    +   Q    +++E+++   +   L  GRL+ +R+ 
Sbjct: 850 TVEDCKCDVCSKDLDRFLNATVKYKQNTSNILTELSKSADIFKVLRIGRLVVLRDA 905



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 131/237 (55%), Gaps = 17/237 (7%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            E+ +  ++R A +  EI+ L   M D  +    D  K R  VL+  G ID++  V+LKGR
Sbjct: 1055 EHFVPGYKRYA-IEDEIELLTHLMSDENLNLLPDYEK-RLAVLQSAGFIDSNHNVELKGR 1112

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             AC I++G EL++TEL+ +    D +  ++ AL S F+   ++ E+      +A P  +L
Sbjct: 1113 VACEINSGYELVITELILDNFLGDFEPEEIVALLSVFVYEGRTREE---EPPIATP--RL 1167

Query: 848  QESARKIAEI---------QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQM 898
             +  ++I EI         +N+  L     E+++   R  LM+V+Y W++G +F E++Q+
Sbjct: 1168 IKGKKRIQEIYQRMLTVYEENQVPLTQEEAEFLDKK-RFALMNVVYEWARGLSFKEIMQI 1226

Query: 899  TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +   EG+++R    LDE   Q++ A+  +G   L+ K + A E ++R I+F+ SLYL
Sbjct: 1227 SPEAEGTVVRVITWLDEICRQVKTASIIIGNPALQMKMSRAQELIKRDIVFAASLYL 1283


>gi|448114139|ref|XP_004202502.1| Piso0_001340 [Millerozyma farinosa CBS 7064]
 gi|359383370|emb|CCE79286.1| Piso0_001340 [Millerozyma farinosa CBS 7064]
          Length = 1224

 Score =  426 bits (1094), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 234/552 (42%), Positives = 333/552 (60%), Gaps = 41/552 (7%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ ++  LE+ +SV V+AHTSAGKT +AEYAIAMA R+  + IYTSP
Sbjct: 270 DMAREFPFELDTFQQEALYHLEQGDSVFVAAHTSAGKTVIAEYAIAMAKRNMTKAIYTSP 329

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+  + FKD  VGL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +
Sbjct: 330 IKALSNQKFRDFKETFKDIDVGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEF 389

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D +RGVVWEE II LP  IK + LSAT+ N  +FA W+    ++  +V+ 
Sbjct: 390 VIFDEVHYVNDIDRGVVWEEVIIMLPNHIKYILLSATVPNTFEFANWVGRTKQKDIYVIS 449

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQ------------DTFLKQ--- 290
           T  RP PL+  +F    + ++  VD + +F E  F K +            +T L     
Sbjct: 450 TPKRPVPLE--IFIWAKNNMFKAVDSQRKFSETEFKKHKSALEGNNKNSRPNTVLSNGSR 507

Query: 291 -------------KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
                         +   R  G  S + A    G        +V+ +      PV++F F
Sbjct: 508 GGRGGTARGGNRGNLSASRGRGNISQKSAFMRDGPNKGTWSSLVQHLRSSNLLPVVIFVF 567

Query: 338 SRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
           S++ CE++A ++  +DF T +EK  +      AV  L +EDR LP I  +  LL RGIAV
Sbjct: 568 SKKRCEEYADTLKGIDFCTGKEKSEIHNFIDKAVSRLRKEDRELPQIMKIRELLGRGIAV 627

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH GLLP++KE +E+LF + LV+ LFATETFAMGLN+P +TVVF++ +K DG   R +  
Sbjct: 628 HHGGLLPIVKECIEILFSKSLVRVLFATETFAMGLNLPTRTVVFSSYRKHDGRGFRNLLP 687

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
           GE+ QMSGRAGRRG D  G  IIM  ++ +     K++ LG P  L S FRL+Y  ILNL
Sbjct: 688 GEFTQMSGRAGRRGLDTTGTVIIMAYNDPLSPTDFKEITLGVPTKLHSQFRLTYNMILNL 747

Query: 517 MSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKL 576
           + R E     E +IK+SF +   +  LP+  ++V +L+ E  +L      EV        
Sbjct: 748 L-RIEA-LRVEEMIKHSFSENSTQTLLPEHQQRVKELQVELDNL------EVTHLDDCPA 799

Query: 577 DIAQLEKKLMSE 588
           D  +L  +L+SE
Sbjct: 800 DRVELVYELLSE 811



 Score =  110 bits (275), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 158/290 (54%), Gaps = 12/290 (4%)

Query: 675  AVQELESRFPQGLPKLNPVKDMKIEDP---EVVDLVNQIEELEHKLFAHPL-NKSQDENQ 730
            +++ELES   Q L      +++         + +L+++ ++LE ++ +  + + +  ++ 
Sbjct: 938  SIEELESEIKQLLKFQRSWRELNFRQASQLNLYELLDRKKDLEEQINSSDIFDSAHFKDV 997

Query: 731  IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
             +   ++  +  E++ L+S + D  ++    E   R  VL+ L  ID    V LKGR AC
Sbjct: 998  YKQVSKRNAIVSEVKSLQSLISDENLE-LLPEYTQRLEVLRSLEFIDQHHNVVLKGRVAC 1056

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKPLQQ 846
             I++G EL++TEL+ +    + +  ++ AL SCF+   +++E+    +  R+E  +  ++
Sbjct: 1057 EINSGWELIITELILDNFLGEYEPEEIVALLSCFVYEGRNNEKEEPCVTPRLERGR--KR 1114

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGS 905
            +   A K+ +I    ++ + ++E        F L++V+Y W++G +F E++Q++   EG+
Sbjct: 1115 IMSIAEKLMKIYASKRITLTMEEEEFFERNRFALVNVVYEWARGMSFNEIMQISLEAEGT 1174

Query: 906  IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            I+R   RLDE   Q++ AA  +G+  L  K + A E ++R I+F  SLYL
Sbjct: 1175 IVRVITRLDEVCRQVKNAALIIGDSILHLKMSEAQEKIKRDIVFCASLYL 1224


>gi|195999190|ref|XP_002109463.1| hypothetical protein TRIADDRAFT_21387 [Trichoplax adhaerens]
 gi|190587587|gb|EDV27629.1| hypothetical protein TRIADDRAFT_21387, partial [Trichoplax
           adhaerens]
          Length = 937

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 217/500 (43%), Positives = 331/500 (66%), Gaps = 17/500 (3%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA T+ FELD FQ+ ++  LE++E+V V+AHTSAGKT VAEYAIA+A +   + IYTSP+
Sbjct: 23  MAFTWPFELDAFQKQAIMKLEKHENVFVAAHTSAGKTVVAEYAIALASKHVTKAIYTSPI 82

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+    F DVGL+TGDV ++P ASCL+MTTEILR MLY GS+ ++++ WVIF
Sbjct: 83  KALSNQKFRDFKMTFGDVGLLTGDVQINPEASCLIMTTEILRSMLYNGSDTIRDIEWVIF 142

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERGVVWEE +I LP  + ++ LSAT+SN+ + A+W+    ++  HV+ T  
Sbjct: 143 DEVHYINDDERGVVWEEVVILLPDHVGLILLSATVSNSDELADWVGRTKRKQIHVISTTK 202

Query: 249 RPTPLQHYVF--PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK---ASG 303
           RP PL+H+++  P   +   L+    + F  D + KL     + +    RE  K   ++ 
Sbjct: 203 RPVPLEHFLYRSPNQKTDKDLI----KIF--DIYYKLMGVIFRYQSNSLREAFKRPTSTK 256

Query: 304 RMAKGGSGSGG-SDIFK-IVKMIMERK--FQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
              KGG  +   + I++ ++K ++++     P +VF FSR++C+  A S+S  +  T++E
Sbjct: 257 PTPKGGKPTTKEAQIYQSLIKNLIKKDPPMVPAVVFVFSRKKCDNLAGSLSTANLTTKDE 316

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           K  +++  + ++  L+++D+ LP +  +  +L+ G+AVHHSG+LPV+KE+VE+++QEGLV
Sbjct: 317 KSKIKRFIKKSISILSDKDQKLPQVVWLCEMLQLGVAVHHSGILPVLKEIVEMVYQEGLV 376

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K LFATETFAMG+NMPAK V+F  + K DG+S R +  GEYIQM+GRAGRRGKD  G  I
Sbjct: 377 KCLFATETFAMGVNMPAKCVIFDTISKHDGNSRRRLHPGEYIQMAGRAGRRGKDKTGTVI 436

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           +++ E++    L+ M+ GKP  L S FRL+Y   L ++ R E     E ++  SF +   
Sbjct: 437 MLLKEEINEIDLRQMITGKPQKLQSKFRLTYGMALKVL-RVEN-LEVEDLMWRSFAELHK 494

Query: 540 EKALPDIGKKVSKLEEEAAS 559
           +     + K++  L+ ++ S
Sbjct: 495 QVRKSTLEKQLLPLQTKSRS 514



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/196 (36%), Positives = 111/196 (56%), Gaps = 21/196 (10%)

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
           + KNR  +L+ LG+ID  GVVQLKGR AC I+   ELL+TEL+F+   N +   ++AAL 
Sbjct: 760 DYKNRRELLQCLGYIDERGVVQLKGRVACEINNC-ELLITELVFDNILNPMAPEEIAALL 818

Query: 822 SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY--VESTVRPFL 879
           SC +                   QQ  E  R  A+  ++ + E N+D Y   E  +   L
Sbjct: 819 SCIV------------------FQQGVEVIRGKAKELDKLEAEYNIDIYEKYEDMINFGL 860

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
           ++V++ W+KG  FA+++ +TD+ EG I+R  +RLD    +++ AA+ +G+  L  K   A
Sbjct: 861 VEVVHDWAKGEPFAKIMTLTDVSEGVIVRCIQRLDSACMEVKTAARIIGDPVLFDKMIEA 920

Query: 940 SESLRRGIMFSNSLYL 955
           S  ++R I F+ SLY+
Sbjct: 921 SRMIKRDICFTASLYI 936


>gi|380024872|ref|XP_003696213.1| PREDICTED: LOW QUALITY PROTEIN: helicase SKI2W-like [Apis florea]
          Length = 1225

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/502 (44%), Positives = 323/502 (64%), Gaps = 20/502 (3%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E+A ++ +ELD FQ+ ++  LE   +V V+AHTSAGKT VAEYAIA++ +   +VIYTSP
Sbjct: 278 ELAMSFPYELDIFQKQAILKLEEGCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSP 337

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYREL ++F+ VGL+TGD+ ++PNASCL++TTEIL+ MLY  SEVL+++ +VI
Sbjct: 338 IKALSNQKYRELKRKFESVGLLTGDLQINPNASCLIITTEILQSMLYCASEVLRDLEFVI 397

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ + ERG VWEES+I LP  + +V LSAT+ N   FA+W+    K+  +V+ T 
Sbjct: 398 FDEVHYINNDERGHVWEESVILLPQTVTIVMLSATVPNPLVFADWVGRXKKKKTYVISTL 457

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PLQHY++  G  G      +LV+ E  QF  D + K   T          +N K  
Sbjct: 458 KRPVPLQHYLY-TGTDGKTKDDKFLVLGESGQFLLDGWYKA--TKFXNSKNQVNKNIKDV 514

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQ---PVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
            +++     +   +       I   K Q   PV+VF  SR+ C+  A+ +  +D  T+ E
Sbjct: 515 KKLSMHQQMTPKQEQVLWSAFISHLKTQNMLPVVVFMLSRKRCDMSAVLLRNVDLTTETE 574

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           K T+E  FQN +  L   DR LP + +M  LL+ GI +HHSG+LP++KE+VE+LFQ G+V
Sbjct: 575 KHTIELFFQNNIRHLKGTDRQLPQVLMMQELLESGIGIHHSGILPILKEIVEMLFQTGVV 634

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K LFATETFAMG+NMPA+TVVF ++KK+DG++ R +   EY+QM+GRAGRRG D  G+ I
Sbjct: 635 KLLFATETFAMGVNMPARTVVFDSIKKYDGNNFRILYPSEYVQMAGRAGRRGHDTTGMVI 694

Query: 480 IMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF---- 534
           +M    +   N LK+M+ G+   L S F+++Y  +LNL  R     T E +++ SF    
Sbjct: 695 VMCRTSVPHFNELKNMMCGQAQNLESKFKVTYSMVLNL-RRLNESVTVEAMMRRSFKESP 753

Query: 535 ---HQFQYEKALPDIGKKVSKL 553
              +Q  Y+  L ++  ++SKL
Sbjct: 754 VVINQNNYKMQLQEVENELSKL 775



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 126/234 (53%), Gaps = 19/234 (8%)

Query: 730  QIRCFQRKAEVNHEIQQLKSKMRDSQIQ------KFRDELKNRSRVLKKLGHIDADGVVQ 783
            +I  F+ + E+ +E  +L+SK    Q++          E  N   +LK LG+ID D  V 
Sbjct: 999  EILNFEEQFEIVYERSELESKKNKLQLKLSDEGLSLYPEYTNAVALLKDLGYIDNDERVA 1058

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            LKGR A  +   +ELL+TEL+       L   ++AAL S  I   ++  + NL  EL + 
Sbjct: 1059 LKGRVALQMG-NNELLITELILKNVLTVLQPAEIAALLSALIFQQRTDVEPNLTPELKR- 1116

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTD 900
                  S ++I EI  E  LE     Y   T++P    L++V+Y W++  +FAE+++ TD
Sbjct: 1117 ------SCKEIKEIHAE--LEALEQHYQLVTLQPLNFGLVEVVYDWAQAKSFAEIMEKTD 1168

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + EG I+R  ++L E L  ++ AA  +G+  L++K   AS  ++R I+F+ SLY
Sbjct: 1169 VQEGIIVRCIQQLSETLRDVKNAATTIGDPVLKEKMEEASTVIKRDIVFAASLY 1222


>gi|328784274|ref|XP_397131.4| PREDICTED: helicase SKI2W [Apis mellifera]
          Length = 1225

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/502 (44%), Positives = 324/502 (64%), Gaps = 20/502 (3%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E+A ++ +ELD FQ+ ++  LE   +V V+AHTSAGKT VAEYAIA++ +   +VIYTSP
Sbjct: 278 ELAMSFPYELDIFQKQAILKLEEGCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSP 337

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYREL ++F+ VGL+TGD+ ++PNASCL++TTEIL+ MLY  SEVL+++ +VI
Sbjct: 338 IKALSNQKYRELKRKFESVGLLTGDLQINPNASCLIITTEILQSMLYCASEVLRDLEFVI 397

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ + ERG VWEES+I LP  + +V LSAT+ N   FA+W+    K+  +V+ T 
Sbjct: 398 FDEVHYINNDERGHVWEESVILLPQTVTIVMLSATVPNPLVFADWVGRTKKKKTYVISTL 457

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PLQHY++  G  G      +LV+ E  QF  D + K  ++  K       +N K  
Sbjct: 458 KRPVPLQHYLY-TGTDGKTKDDKFLVLGESGQFLLDGWYKATNS--KNSKNQVNKNIKDV 514

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQ---PVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
            +++     +   +       I   K Q   PV+VF  SR+ C+  A+ +  +D  T+ E
Sbjct: 515 KKISIHQQMTPKQEQVLWSAFISHLKTQNMLPVVVFMLSRKRCDMSAVLLRNVDLTTETE 574

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           K T+   FQN +  L   DR LP + +M  LL+ GI +HHSG+LP++KE+VE+LFQ G+V
Sbjct: 575 KHTIRAFFQNNIRHLKGTDRQLPQVLMMQELLESGIGIHHSGILPILKEIVEMLFQTGVV 634

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K LFATETFAMG+NMPA+TVVF ++KK+DG++ R +   EY+QM+GRAGRRG D  G+ I
Sbjct: 635 KLLFATETFAMGVNMPARTVVFDSIKKYDGNNFRILYPSEYVQMAGRAGRRGHDTTGMVI 694

Query: 480 IMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF---- 534
           IM    +   N LK+M+ G+   L S F+++Y  +LNL  R     T E +++ SF    
Sbjct: 695 IMCRTSVPHFNELKNMMCGQAQNLESKFKVTYSMVLNL-RRLNESVTVEAMMRRSFKESP 753

Query: 535 ---HQFQYEKALPDIGKKVSKL 553
              +Q  Y+  L ++  ++SKL
Sbjct: 754 VVINQNNYKMQLQEVENELSKL 775



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 19/234 (8%)

Query: 730  QIRCFQRKAEVNHEIQQLKSKMRDSQIQ------KFRDELKNRSRVLKKLGHIDADGVVQ 783
            +I  F+ + E+ +E  +L+SK    Q++          E  N   +LK LG+ID D  V 
Sbjct: 999  EILNFEEQFEIVYERSELESKKNKLQLKLSDEGLSLYPEYTNAVALLKDLGYIDNDERVA 1058

Query: 784  LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP 843
            LKGR A  +   +ELL+TEL+       L   ++AAL S  I   ++  + NL  EL + 
Sbjct: 1059 LKGRVALQMG-NNELLITELILKNVLTVLQPAEIAALLSALIFQQRTDVEPNLTPELKR- 1116

Query: 844  LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTD 900
                  S  +I EI  E  LE     Y   T++P    L++V+Y W++  +FAE+++ TD
Sbjct: 1117 ------SCEEIKEIHAE--LEALEQHYQLVTLQPLNFGLVEVVYDWAQAKSFAEIMEKTD 1168

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            + EG I+R  ++L E L  ++ AA  +G+  L++K   AS  ++R I+F+ SLY
Sbjct: 1169 VQEGIIVRCIQQLSETLRDVKNAATTIGDPVLKEKMEEASTVIKRDIVFAASLY 1222


>gi|449015367|dbj|BAM78769.1| probable viral mRNA translation inhibitor SKI2 [Cyanidioschyzon
           merolae strain 10D]
          Length = 1490

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 233/499 (46%), Positives = 314/499 (62%), Gaps = 27/499 (5%)

Query: 46  SGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKT 105
           S YAL  DE+    FA  V   + A  + FELD FQ+ ++  +ER ESV V+AHTSAGKT
Sbjct: 453 SVYALV-DESDPVDFAQRV--PKPALEFPFELDRFQKQAILHIERGESVFVAAHTSAGKT 509

Query: 106 AVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLV 163
            VAEYAIA+A     + IYTSP+K LSNQK+R+    F  + +GL+TGDV + P A CL+
Sbjct: 510 VVAEYAIALARAHATKAIYTSPIKTLSNQKFRDFSDRFGSESIGLITGDVCIQPTAPCLI 569

Query: 164 MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATM 223
           MTTEILR MLYRG++++++V WVIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+
Sbjct: 570 MTTEILRSMLYRGADLIRDVEWVIFDEVHYVNDEERGVVWEEVIILLPEHVNIIMLSATV 629

Query: 224 SNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL 283
            NA +FA+W+    ++P +V+ T  RP PLQHY++    + L LV + +  F    +   
Sbjct: 630 PNAQEFADWVGRCKQRPVYVITTSHRPVPLQHYIY--AKNDLILVKNARGDFLSQGYKAA 687

Query: 284 QDT--FLKQKIGGRRENGKAS--GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSR 339
           QD    L  K G +     A   GR A G           +V+ + +R+  P +VF FSR
Sbjct: 688 QDVERELVAKRGAKAHLAPAGILGRPAWG----------TLVQFLRKRELLPAVVFCFSR 737

Query: 340 RECEQHAMSMSKLDFNTQE--EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
           + CE+ A S+  L+ + Q   E   +  V ++A+  L   DR +P I+ +  LL RGI +
Sbjct: 738 KRCEEAADSLGTLNLHQQNPGEAHRIHVVVESALSRLQAADRRVPQIQRVRDLLHRGIGI 797

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH+GLLP++KE+ E+LFQ GLV+ LFATETFAMG+NMPA+TVVF+ ++K DG  +R +  
Sbjct: 798 HHAGLLPIVKEMTEILFQRGLVRVLFATETFAMGVNMPARTVVFSGIRKHDGRQYRLLSP 857

Query: 458 GEYIQMSGRAGRRGKDDRGICIIM--VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
           GEY QMSGRAGRRG D  GI I+   V E      LK  + G P  L S FRLSY  ILN
Sbjct: 858 GEYTQMSGRAGRRGLDAYGIVILFFSVGELPTELDLKRTMTGVPPRLSSQFRLSYNMILN 917

Query: 516 LMSRAEGQFTAEHVIKNSF 534
           L+ R E +   E VI+ SF
Sbjct: 918 LI-RTE-RVQVEEVIRRSF 934



 Score =  122 bits (306), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 133/275 (48%), Gaps = 43/275 (15%)

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-- 780
            N+S         +R+  +  +++ L+       +Q   D ++ R  VL++LG+I+  G  
Sbjct: 1216 NRSVLATAFELAERRHRLEQKLEYLQYASSYRSLQLLPDYMQ-RLAVLERLGYIERSGSG 1274

Query: 781  ---------------------VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
                                 +V LKGRAAC + T D LL+ E MF G F+DL+   +AA
Sbjct: 1275 NNLDYDPVTFSDAERPPSNGLMVTLKGRAACDVGTCDSLLLVESMFEGIFSDLEPCSIAA 1334

Query: 820  LASCFIPVDK-------------SSEQINLRME------LAKPLQQLQESARKIAEIQNE 860
            LASC +  +K              SE   L+++      LA  L +L+  A  +  +Q E
Sbjct: 1335 LASCLVFQEKLDPSEYILPDQAARSELDGLQLDATAMETLAASLNKLKRVALALGTVQAE 1394

Query: 861  CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            C L V+  EY   TV P L+     W++GA F ++   T + EGSI+R+  RL E L + 
Sbjct: 1395 CGLPVSPSEYQSMTVNPGLLIPALLWAQGAPFKDICVWTPVQEGSIVRTIVRLSELLRET 1454

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               A+ +G+  L  K   AS S++R I+F+ SLY+
Sbjct: 1455 ADVARVIGDSRLLSKVDTASRSIKRDIIFAASLYV 1489


>gi|347969420|ref|XP_312880.4| AGAP003182-PA [Anopheles gambiae str. PEST]
 gi|333468516|gb|EAA08476.4| AGAP003182-PA [Anopheles gambiae str. PEST]
          Length = 1223

 Score =  424 bits (1090), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 226/563 (40%), Positives = 352/563 (62%), Gaps = 18/563 (3%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  + FELD FQ+ ++  LE +  V V+AHTSAGKT VAEYAIA++ +   + IYTSP+
Sbjct: 272 MAHRFPFELDIFQKQAILKLEEHSHVFVAAHTSAGKTVVAEYAIALSKKHMTKTIYTSPI 331

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYR+    F+DVGL+TGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIF
Sbjct: 332 KALSNQKYRDFKTTFQDVGLITGDIQIDPTASCLIMTTEILRSMLYCGSDITRDLEYVIF 391

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D +RG VWEE +I LP  + +V LSAT+ N  +FA W+    K+   VV T  
Sbjct: 392 DEVHYITDSDRGHVWEEVLILLPDHVCIVMLSATVPNTIEFANWVGKTKKKRVWVVSTAK 451

Query: 249 RPTPLQHYVFP-VGGSG---LYLVVDEKEQFREDNFVKLQDTF-LKQ-KIGGRRENGKAS 302
           RP PL+HY++   GG      +L+V+ + QF +D + + ++++  KQ K  GRR NG  S
Sbjct: 452 RPVPLEHYLYTGFGGKSKDDSFLIVNAQSQFVQDGYRRAKESYEAKQAKSTGRRTNGPYS 511

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
            R  +       +    ++  + +++  PV+ F+ SR  C+ +A ++   D  T  EK  
Sbjct: 512 QRQEQ-------TLWVGLIDHLQKKEKLPVVAFTLSRNRCDNNAEALMSCDLTTAREKYA 564

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +   FQ  +  L   DR LP ++ +   L+RGI +HHSG+LP++KE+VE+LF  GLVK L
Sbjct: 565 ITSFFQQCLQRLVPADRVLPQVQQIQSCLERGIGIHHSGILPILKEIVEMLFARGLVKIL 624

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPA+TV+F + +K+DG + R +   EY QM+GRAGRRG D  G  II+ 
Sbjct: 625 FATETFAMGVNMPARTVIFDSTRKFDGQAFRPLQPSEYTQMAGRAGRRGLDKTGTVIILC 684

Query: 483 DEQMEMN-TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
            + + ++  LK M+LGKP  L S FRL+Y  +L L+ R E   + E+++ +SF +F   +
Sbjct: 685 KQNLPLDGELKTMILGKPVRLESQFRLTYAMMLYLL-RVE-LVSVENMMLHSFREFDKRQ 742

Query: 542 ALPDIGKKVSKLEEEAASLDASGE--AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +P    ++++++E+ ++L    +    + E+++   +   L  +L+ +     + +  L
Sbjct: 743 QMPQSKLELNQVQEKMSALSKLSDHLQPLCEFYEAASEYLNLRNELLPKQLCQPKAINEL 802

Query: 600 GSGRLIKVREGGTDWGWGVVVNV 622
             GR++ V +       G++++V
Sbjct: 803 KVGRVVVVTDEHHYNKLGILLSV 825



 Score = 97.8 bits (242), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 125/231 (54%), Gaps = 18/231 (7%)

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELK------NRSRVLKKLGHIDADGVVQLKGR 787
            F+ +  V ++ +QL+ K+ + + Q   + L        + +VL++L +ID    V +KGR
Sbjct: 990  FEHEFAVVYDRKQLERKLDELKYQASYESLSLYPDYCRKLQVLQELKYIDDMQQVAMKGR 1049

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             AC +   +EL++TEL+      DL   ++AAL S  +   KS     L        + L
Sbjct: 1050 VACEMGQ-NELMITELVMRNILTDLQPAEIAALLSSLVFQAKSDVTPKLT-------ETL 1101

Query: 848  QESARKIAEIQNECKL---EVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFE 903
            Q++  +  E++N+ +L   +  V +  +     F L +V+Y W++   FAE++ +TDI E
Sbjct: 1102 QKAEAQFREVENDIRLVERQYGVTDVCKKEELNFGLTEVVYEWARNKPFAEIMLLTDIKE 1161

Query: 904  GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
            G I+R  ++L+E L  ++ AA+ +G+  L  K   AS +++R I+F+ SLY
Sbjct: 1162 GIIVRCIQQLNETLCNVKDAARIIGDPVLHSKMEEASNAIKRDIVFAASLY 1212


>gi|300706895|ref|XP_002995680.1| hypothetical protein NCER_101360 [Nosema ceranae BRL01]
 gi|239604872|gb|EEQ82009.1| hypothetical protein NCER_101360 [Nosema ceranae BRL01]
          Length = 868

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 299/956 (31%), Positives = 480/956 (50%), Gaps = 121/956 (12%)

Query: 29  KKQRNLTRSC-VHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVAC 87
           K  + LT S  V +  +P  YA   DE+I                  F  D FQ+ +   
Sbjct: 5   KPYKELTHSISVDKTWLPKDYAKHVDESILRI--------------DFVPDIFQKQAFYF 50

Query: 88  LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVG 147
           L R+ES+ VSAHTSAGKT VAEYAI ++ ++  R IYTSP+KALSNQKY +  Q++ DVG
Sbjct: 51  LSRHESIFVSAHTSAGKTLVAEYAICLSEKNNFRTIYTSPIKALSNQKYYDFKQKYSDVG 110

Query: 148 LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
           ++TGDV ++P A+CL+MTTEILR ++Y+ +++L    +++FDE+HY+ D+ERGVVWEE I
Sbjct: 111 IITGDVQVNPTANCLIMTTEILRNLIYKNNDILHSTRYIVFDEVHYINDQERGVVWEECI 170

Query: 208 IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
           I LP  I  + LSAT+ NA +F +W+     +  +++ T+ RP PL+H+++      +Y 
Sbjct: 171 IMLPKHITFILLSATIPNAKEFGDWVGRTKSRTIYIISTNKRPVPLEHFIY--SDRDVYA 228

Query: 268 VVDEKEQFREDNFVKLQDTF---LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMI 324
           + +          V +Q      +K K+    +    +GR            + ++V  I
Sbjct: 229 ISEN---------VNIQHKLPSNIKSKVVPYSKKNTPTGRFK----------VLELVNFI 269

Query: 325 MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
           + +K  P I+F FS+R+CE     +S LD  T +EK  + +    A++ L+EEDR LP I
Sbjct: 270 IRKKLAPAILFCFSKRKCELIIEELSSLDLTTVQEKKYIHEFLNKAINQLSEEDRFLPQI 329

Query: 385 ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
             +      GI VHH  LLP +KE VE+LF    VK L ATETFAMG+NMPAK V F  +
Sbjct: 330 VKVKKFANLGIMVHHGALLPFVKECVEILFSFNFVKILIATETFAMGVNMPAKCVAFLTL 389

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVS 504
            K DG++ R + +GEY QMSGRAGRRG D  G  +I  ++   + T+K ++ G P  L S
Sbjct: 390 SKIDGETFRNLTNGEYTQMSGRAGRRGMDRVGTVLIADEKVPSLFTIKKIIDGTPLSLNS 449

Query: 505 TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ-FQYEKALPDIGKKVSKLEEEAASLDAS 563
            F+LS+  IL  +      F  E ++K S+ + F+ +    D+ K V     E   L   
Sbjct: 450 QFKLSFGLILIAL---RSNFKVEDLMKKSYKEHFKQKSEHKDMFKLV-----ELEKLKMI 501

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSE---ITRPERVLYYLGSGRLIKVREGGTDWGWGVVV 620
              ++  Y  L   I++   KL ++   I++ + V+  L +  ++++    +D  + V  
Sbjct: 502 ECEDIDIYISLLRTISKNNSKLFAKHKLISQNDLVM--LFNNEVVRINSVNSDGTFSVKQ 559

Query: 621 NVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELE 680
           N     +  +  + S        +++   S LS   L  P  +  L++   +   V ++ 
Sbjct: 560 N----ENINLNFMLSN-------LKISKKSHLSSDLLVFPHTIY-LNSNTRV-CKVSDIF 606

Query: 681 SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEV 740
               +G     P  D  ++D E   L   I++   ++           ++++C      V
Sbjct: 607 CILKEG----KPFFDYNLKDFEDFMLEKNIKDAYLRI-----------SKLKCITCSNFV 651

Query: 741 NH------------EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
            H            EI ++K K   + +    DE K+R + L K    D    V LKGR 
Sbjct: 652 EHYNYAVEYILAQEEILRIKLKYSINNLD-LIDEYKSRIKFLVKNKFYDES--VTLKGRV 708

Query: 789 ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQ 845
           A  I T +E+L TE++F+  F +     + +L S  I    +D     ++L+  +++ L 
Sbjct: 709 AAEIRTVNEVLSTEMIFDNKFKNFQPEIIISLFSSMIFEEEMDDYDYSVDLKEGVSRLLC 768

Query: 846 QLQESARKIAEIQNECKLEVNVDEYVESTVRPF------LMDVIYCWSKGATFAEVIQMT 899
             +  ++ I+++                 + PF      +M  +  W +  +   +++  
Sbjct: 769 YYENLSKDISDL----------------FIPPFKPLNFSMMQAVLDWCRKESLQNIVKNY 812

Query: 900 DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + EGS +R   RLDE   ++  A   +G+ +LEKKF  AS  L+R I+F  SLYL
Sbjct: 813 GVSEGSFVRLILRLDECCREMINATILMGDKDLEKKFEEASVLLKREIVFLPSLYL 868


>gi|407039708|gb|EKE39781.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
          Length = 1040

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 303/930 (32%), Positives = 474/930 (50%), Gaps = 80/930 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +M + Y FELD FQ+ ++  +E +E V V AHTSAGKTA AEYAI++A     + IYTSP
Sbjct: 70  DMKRKYDFELDTFQKQAIYHMELDEHVFVIAHTSAGKTATAEYAISIAKSKGMKAIYTSP 129

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCL-VMTTEILRGMLYRGSEVLKEVAWV 186
           +KALSNQKY +  + F  VG+MTGDV +      + +MTTEILR  LY+ S+ +++V WV
Sbjct: 130 IKALSNQKYYDFRKIFGKVGIMTGDVVIQGEDDLVTIMTTEILRSKLYQDSKFIEQVDWV 189

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE I+ LP  +KM+ LSAT+ NA  FAEWI     Q   +V T
Sbjct: 190 IFDEVHYVNDEERGVVWEEVIMSLPKHVKMLMLSATVENAINFAEWIGRTKDQRVCLVKT 249

Query: 247 DFRPTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            +RP PL+HYVF        S L L    +  F  +N+ +     + +    RR   +  
Sbjct: 250 LYRPVPLEHYVFCKKKEELPSKLILFKKGESTFLLNNYTEAYQRIVPKFSKNRRVKDQLH 309

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LDFNTQEEKD 361
           G           + I +++  +      P + F FSR+    +A  ++K   F+T   K 
Sbjct: 310 GV----------NSIEELINYLEHDTKLPAVFFIFSRKLVMDYAKKLAKATKFDTNPYK- 358

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +  +F+   + L + ++NLP I  +  LL RGI VHH+GL+P +KE+VE+LF +G +K 
Sbjct: 359 -INSLFKEMTEGLVDSEKNLPQISEVKSLLMRGIGVHHAGLIPFLKEIVEVLFSQGDIKV 417

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           LFATETFAMG+NMPAK+V+F +V+K+DG   R++  GEY QM+GRAGRRGKD  G  II 
Sbjct: 418 LFATETFAMGVNMPAKSVIFPSVEKFDGKETRFLLPGEYTQMAGRAGRRGKDAAGNVIIF 477

Query: 482 VDEQMEM-NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            ++ +     ++++  G PA ++S F ++Y+ +LN +       T +  +  S+ +    
Sbjct: 478 PNQVLPSPKQMQEISCGAPAKMISQFYITYWMMLNWVCFGGDDLTQQ--MMKSYSKID-- 533

Query: 541 KALPDIGKKVSKLEEEAASL--DASGEAEVAEYHKLKLDIAQLE-KKLMSEITRPERVLY 597
             L ++ ++ + L EEA  L    +   E  E     LDI + E K +  EITR      
Sbjct: 534 --LFEMAQR-NNLAEEARKLLQHTTTVCENPECDHEALDIIKKEVKDIKKEITREIIEAK 590

Query: 598 YLG------SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST 651
           + G      +GR+IK R       +GV++  +   S        +G    +     L S 
Sbjct: 591 FKGGNNFNINGRVIKFRAENEKRYFGVIIEPLDNGSMVYYFDEKKGMNEFI-----LFSD 645

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL--------------PKLNPVKDMK 697
           +    +++           +   A+ E+E+   Q L              P   P +  K
Sbjct: 646 M----IAIYQKQFKAKGGNNYSEALLEIENNQRQALYDRLVGFKKNRGKEPFFQPYQSEK 701

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK-AEVNHEIQQLKSKMRDSQI 756
               +   L+ Q  E    + A P           C   K  E   + Q+   KM D   
Sbjct: 702 KRPKDYSSLIQQYNEHIKIMKAMP--------AYSCVAYKYGEKEDKAQRQLEKMIDEIT 753

Query: 757 QKFR-------DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
            K++        EL  R  VLK    +D   ++ LKG+ A  + + D +++T +MF+G  
Sbjct: 754 GKYQMNKERVDRELNLRLEVLKHFNFVDEHNLLTLKGKVAKEMVSSDGMILTNMMFDGVL 813

Query: 810 NDLDHHQVAALASCFI--PVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECKLEV 865
           N L+ H++AA+ S F+  P ++S E++  +   +    +  + + A +I + ++   +E 
Sbjct: 814 NQLEIHEMAAIFSVFVFEPSNESQEELIDHFSSQTKSLMNLVDQYAMEIVDYEDSLNMEY 873

Query: 866 NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
           N+++YV+      LM+ +  W+    F EVI  +   EG I+R   R+++   ++  AAQ
Sbjct: 874 NIEKYVKLNFG--LMEGVALWALRKPFNEVIDSSATTEGLIVRCVLRMEQVCEEVIKAAQ 931

Query: 926 AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +G   L  K       L+R I+   SLYL
Sbjct: 932 IIGNEELLNKTTQLLGLLKRDIINVKSLYL 961


>gi|312385895|gb|EFR30287.1| hypothetical protein AND_00228 [Anopheles darlingi]
          Length = 1749

 Score =  423 bits (1088), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 230/552 (41%), Positives = 337/552 (61%), Gaps = 14/552 (2%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            MA  + FELD FQ+ ++  LE +  V V+AHTSAGKT VAEYAIA++ +   + IYTSP+
Sbjct: 743  MAHRFPFELDIFQKQAILKLEEHSHVFVAAHTSAGKTVVAEYAIALSKKHLTKSIYTSPI 802

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQKYR+    F+DVGLMTGD+ + P ASCL+MTTEILR MLY GS++ +++ +VIF
Sbjct: 803  KALSNQKYRDFKTTFQDVGLMTGDIQIDPTASCLIMTTEILRSMLYCGSDITRDLEYVIF 862

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE+HY+ D ERG VWEE +I LP  + +V LSAT+ N  +FA W+    K+  +VV T  
Sbjct: 863  DEVHYITDSERGHVWEEVLILLPDHVCIVMLSATVPNTLEFANWVGKTKKKRVYVVSTAK 922

Query: 249  RPTPLQHYVFP-VGG---SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
            RP PL+HY++   GG   S  +L+V+E   F ++ + K ++    ++       G     
Sbjct: 923  RPVPLEHYLYTGFGGKSKSDCFLIVNEHSAFTQEGYRKAKECMEVKQAKASGGGGPVMRN 982

Query: 305  MAKGGSGSGGSDIFKIVKMIMERKFQ---PVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
              + G  S   +    V +I   K Q   PV+ F+ SR  C+ +A ++   D  T  EK 
Sbjct: 983  QKRTGPYSQKQEQTLWVGLIHHLKSQDKLPVVAFTLSRNRCDSNADALLSCDLTTAREKY 1042

Query: 362  TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
             +   FQ  +  L   DR LP +  M   L+RGI +HHSG+LP++KE+VE+LF  GLVK 
Sbjct: 1043 VINSFFQQCLHRLIPPDRALPQVRQMQSCLERGIGIHHSGILPILKEIVEMLFARGLVKI 1102

Query: 422  LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
            LFATETFAMG+NMPA+TV+F + +K+DG   R +   EY QM+GRAGRRG D  G  II+
Sbjct: 1103 LFATETFAMGVNMPARTVIFDSTRKFDGQCVRPLQPSEYTQMAGRAGRRGLDKTGTVIII 1162

Query: 482  VDEQMEMNT-LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
               ++   + LK M++GKP  L S FRL+Y  +L L+ R E   T E+++ +SF +F   
Sbjct: 1163 CKNEVPAESELKTMIMGKPVRLESQFRLTYAMMLYLL-RVE-LVTVENMMLHSFREFGKR 1220

Query: 541  KALPDIGKKVSKLEEEAASLDASG---EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
            + +P    ++SK++E+ + L+  G   +     YH  +  I   ++ +  ++ +P + L 
Sbjct: 1221 QQIPQSKLELSKVQEKVSRLNKLGDHLQPLCDFYHAAEESIRLWDEIMPKQLCQP-KALN 1279

Query: 598  YLGSGRLIKVRE 609
             L  GR++ + E
Sbjct: 1280 ELKPGRVLVITE 1291



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 134/286 (46%), Gaps = 45/286 (15%)

Query: 704  VDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL 763
            V L N +++ + +L  H     Q    I  F+ +  + ++  QL+ K+ D + Q   + +
Sbjct: 1451 VQLTNDLQKAQSRLAQH-----QPYTNIANFEHEFALVYDRMQLERKLDDLKFQVSYESM 1505

Query: 764  K------NRSRVLKKLGHID-------------ADGV---------------VQLKGRAA 789
                    +  VL+ L +ID              DG+               V +KGR A
Sbjct: 1506 SLYPDYCRKLEVLQDLKYIDDMHQGRWCVCRCSGDGIAKGCCCSPFAACLVTVAMKGRVA 1565

Query: 790  CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            C +   +EL++TEL+      DL   ++AAL S  +   K+     L   L K + Q +E
Sbjct: 1566 CEMGQ-NELMITELVMRNILTDLQPAEIAALLSSLVFQAKTDVSPKLTETLEKAVTQFRE 1624

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
                I  ++ +      V E V+     F L++V+Y W+    FAE++ +TDI EG I+R
Sbjct: 1625 VENDIRSVERQ----HGVMEVVKKEELNFGLVEVVYEWACNKPFAEIMTLTDIKEGIIVR 1680

Query: 909  SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
              ++L+E L  ++ AA+ +G+  L  K   AS +++R I+F+ SLY
Sbjct: 1681 CIQQLNETLCNVKDAARIIGDPVLHSKMEEASNAIKRDIVFAASLY 1726


>gi|223993461|ref|XP_002286414.1| hypothetical protein THAPSDRAFT_31145 [Thalassiosira pseudonana
           CCMP1335]
 gi|220977729|gb|EED96055.1| hypothetical protein THAPSDRAFT_31145 [Thalassiosira pseudonana
           CCMP1335]
          Length = 938

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/506 (44%), Positives = 310/506 (61%), Gaps = 29/506 (5%)

Query: 57  HGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF 116
           H    NP      A T+ FELD FQ+ ++  LER+E V ++AHTSAGKT  AEYAIA+A 
Sbjct: 3   HTLLPNP------ALTFPFELDDFQKQAILRLERSECVFLAAHTSAGKTVCAEYAIALAM 56

Query: 117 RDKQRVIYTSPLKALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYR 175
           +   R IYTSP+KALSNQKYR+   +F  DVGL+TGD+ +  + SCL+MTTEILR MLYR
Sbjct: 57  KHCTRAIYTSPIKALSNQKYRDFRNKFGDDVGLITGDMQIGADGSCLIMTTEILRSMLYR 116

Query: 176 GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICH 235
           G+++++++ WVIFDE+HY+ D ERGVVWEE II LP  + ++FLSAT  N  +F+EWI  
Sbjct: 117 GADLIRDIEWVIFDEVHYINDSERGVVWEEVIIMLPDYVNLIFLSATTPNTIEFSEWIGR 176

Query: 236 LHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--- 292
             ++P HV+ T++RP PL H ++   G  L+ +++ +E F    + +     +       
Sbjct: 177 TKRKPVHVIRTNYRPVPLSHNLW--AGMKLHKLMEGREGFNPKGYSEAAKALMPASARAA 234

Query: 293 ----GGRRENGKAS-----GRMAKGG--SGSGGS--DIFKIVKMIMERKFQPVIVFSFSR 339
               GG+  +G        GR A G   S   GS  D   + + +      P +VFSFS+
Sbjct: 235 ADAKGGKNSSGSGKPAPPPGRPASGSKVSQQQGSKQDWLSLARYLEREGLMPTVVFSFSK 294

Query: 340 RECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHH 399
           ++CE+ A  +  L+ NT  E + V+      V  L+  D  LP +   + +++RGI VHH
Sbjct: 295 KKCEEIAHMLRSLNLNTAAETNLVQGFAIQTVARLSTADAKLPQVIATVEMVRRGIGVHH 354

Query: 400 SGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGE 459
            GLLP++KE+VE+LF   L+K LFATETFAMG+NMPA+ VVF A++K DG   R +  GE
Sbjct: 355 GGLLPILKEMVEILFSRNLIKVLFATETFAMGVNMPARCVVFNAIRKHDGMQFRELQPGE 414

Query: 460 YIQMSGRAGRRGKDDRGICIIMV--DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           Y QM+GRAGRRG D  G  II    D       L++M+ G    L S FRL+Y  ILNL+
Sbjct: 415 YTQMAGRAGRRGLDKVGTVIICCFGDTPPPQLVLRNMLTGSSTKLQSRFRLTYAMILNLL 474

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKAL 543
            R E   + E +IK SF +F  ++AL
Sbjct: 475 -RVE-DMSVEGMIKRSFSEFAAQRAL 498



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 132/222 (59%), Gaps = 3/222 (1%)

Query: 736 RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
           RK  +   +  L+  + +  +  F D    R  +L+ LG++D +  V LKGR AC ++T 
Sbjct: 717 RKEILRSRVTTLRHLLSNESLALFPD-YSQRKDLLRSLGYVDENDTVCLKGRVACEVNTC 775

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN--LRMELAKPLQQLQESARK 853
           + L+VTE++F G  ++L+  ++ AL S  +  +K  E ++  L   L    ++++E A +
Sbjct: 776 EGLIVTEMLFEGVMSELEPAEIVALLSALLFQEKKDEDLDSELPQRLVSGCERMKEIAIR 835

Query: 854 IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
           + + Q +C L V+  EY  S+++  L+ V+Y W+ G  FA + ++TD+ EGSI+R   RL
Sbjct: 836 LGQQQKDCGLPVDPLEYCASSLKMGLVHVVYEWASGVPFASICELTDVQEGSIVRCITRL 895

Query: 914 DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           DE   ++R  ++ VG   L +K  AASE+++R I+F++SLY+
Sbjct: 896 DELCREVRNCSRVVGNPTLYRKMEAASEAIKRDIVFASSLYV 937


>gi|346976173|gb|EGY19625.1| antiviral helicase SKI2 [Verticillium dahliae VdLs.17]
          Length = 1283

 Score =  422 bits (1085), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 248/610 (40%), Positives = 346/610 (56%), Gaps = 70/610 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ ++  LE  +SV V+AHTSAGKT VAEYAIA+A R   + IYTSP
Sbjct: 298 DMARDWPFELDTFQKEAIYHLENGDSVFVAAHTSAGKTVVAEYAIALAARHMTKAIYTSP 357

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  QEF +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 358 IKALSNQKFRDFRQEFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 417

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    ++  +V+ T 
Sbjct: 418 FDEVHYVNDLERGVVWEEVIIMLPEHVSLILLSATVPNTHEFASWVGRTKQKDIYVISTP 477

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE----DNFVKLQDTFLKQKI---GGRRENG- 299
            RP PL+HY++   G  ++ +V   ++F E    D    LQ     ++I   G  R  G 
Sbjct: 478 KRPVPLEHYLW--AGKDIHKIVTADKKFSEKGWKDANAALQGKEKPKQIESSGNARGGGP 535

Query: 300 ------------------------------------------KASGRMAKGG-----SGS 312
                                                      A G M +GG     S +
Sbjct: 536 SRGGQRGGQRGGPQRGGQRGGGGQRGGGGGQQRGRGGPPRASHAPGHMGRGGRSGFASAA 595

Query: 313 GGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV 371
              +I+  +V+ + +    P  +F FS++ CEQ+A ++S  DF T  EK  +    + +V
Sbjct: 596 QDKNIWVHLVQFLKKNTLLPACIFVFSKKRCEQNADALSNQDFCTASEKSAIHMTIEKSV 655

Query: 372 DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
             L  EDR LP I  +  LL RGIAVHH GLLP++KE+VE+LF + LVK LFATETFAMG
Sbjct: 656 ARLKPEDRQLPQIIRLRELLSRGIAVHHGGLLPIVKEVVEILFAQTLVKVLFATETFAMG 715

Query: 432 LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM----VDEQME 487
           LN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+     DE   
Sbjct: 716 LNLPTRTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDPVGSVIIVPPGTSDEVPP 775

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
           +  L+ M+LG+ + L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  
Sbjct: 776 VVELQKMILGEASKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHE 833

Query: 548 KKVSKLEEEAA-----SLDASGEAEVAEY-HKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
           K V   E   A     S D   + +V +  H+   D  +L   L S + +          
Sbjct: 834 KAVKVSEAGLAKIKRDSCDTCDKDKVMDVCHQASQDFKELTTSLYSALVKLPIGRKMFSQ 893

Query: 602 GRLIKVREGG 611
            RLI   + G
Sbjct: 894 ARLIIYNKDG 903



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 124/218 (56%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I QL+  + +  +Q   D  + R  VLK+L  ID    + LKG+ AC I +GDEL+
Sbjct: 1067 IKDHIAQLQLSLSNQNLQLLPD-YEQRVLVLKELQFIDDSARILLKGKVACEIHSGDELV 1125

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+ +    D +  ++AAL S F+  +K+  +  L   L +  Q + + + KI  +Q 
Sbjct: 1126 LTELILDNVLADYEPAEIAALLSAFVFQEKTDSEPTLTGNLERGKQTIIDISEKINNVQT 1185

Query: 860  ECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++  + D+  + T RP   LM+V+Y W++G +F  +  +TD+ EG+I+R+  RLDE  
Sbjct: 1186 IHQVIQSTDDSNDFTSRPRFGLMEVVYEWARGMSFKNITDLTDVLEGTIVRTITRLDETC 1245

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ +G+  L +K  AA E ++R I    SLY+
Sbjct: 1246 REVKNAARIIGDPELYQKMQAAQELIKRDITAVASLYM 1283


>gi|50285719|ref|XP_445288.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49524592|emb|CAG58194.1| unnamed protein product [Candida glabrata]
          Length = 1283

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 236/608 (38%), Positives = 364/608 (59%), Gaps = 64/608 (10%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+ FELD FQ+ ++  LE+++SV V+AHTSAGKT VAEYAIAM+ R+  + IYTSP+K
Sbjct: 321 ARTWPFELDTFQKEAIYHLEQSDSVFVAAHTSAGKTVVAEYAIAMSKRNMTKTIYTSPIK 380

Query: 130 ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           ALSNQK+R+  + F+DV  GL+TGDV ++P A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 381 ALSNQKFRDFKETFEDVDIGLITGDVQINPEANCLIMTTEILRSMLYRGADLIRDVEFVI 440

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 441 FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 500

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            RP PL+  ++    + L  V++EK +F + NF K      K  I G+      S     
Sbjct: 501 KRPVPLEINIW--AKNELKPVINEKREFSDANFKK-----HKSLIDGKSAKELTSKNSTA 553

Query: 308 GGS----------------------------------GSGGSDIFK-----------IVK 322
             S                                  GS  S  F+           +V 
Sbjct: 554 TNSRGGAATRGRGGSSRGNSARGGRGGRGGSRGAGAIGSNKSQFFRKGGPNKKTWPNLVD 613

Query: 323 MIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLP 382
            + +++  P++VF FS++ CE++A  +  ++F   +E+  +    + ++  L +EDR+LP
Sbjct: 614 YLRKKELLPMVVFVFSKKRCEEYADWLDGINFCDAKERSQIHMFIEKSITRLKKEDRDLP 673

Query: 383 AIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFT 442
            I+ +  LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TVVF+
Sbjct: 674 QIQKIRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVVFS 733

Query: 443 AVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAP 501
            ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M   + + + + K++ LG P  
Sbjct: 734 EIQKHDGNGLRDLTPGEFTQMAGRAGRRGLDTIGTVIVMAYTDPLPVTSFKEVTLGVPTK 793

Query: 502 LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
           L S FRL+Y  ILNL+ R E     E +IK SF +   +   P+  +K+++L+E+   + 
Sbjct: 794 LESQFRLTYNMILNLL-RIEA-LKVEEMIKYSFSENSKQTLQPEHERKINELKEKMDKIK 851

Query: 562 ASGE-AEVAEYHKLKLDI----AQLEKKLMSEITRPERVLYYLGSGRLIKVR--EGGTDW 614
            + + A  ++  +  LD+      +   +M+E+ + + +L  L  GRL+  R  EG    
Sbjct: 852 LNEDCAYCSKDSEQLLDLIVRYQDVTSTMMTELAKTDVILKTLKVGRLVVYRDNEGFHKL 911

Query: 615 GWGVVVNV 622
           G+   +N+
Sbjct: 912 GFIFRLNI 919



 Score =  107 bits (266), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 123/225 (54%), Gaps = 10/225 (4%)

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            K  +  EI+ L   M D  +    D  K R  VL K G ID +  V LKGR AC I++G 
Sbjct: 1063 KYNLGKEIKNLYHLMSDQNLNLLPDYEK-RLTVLYKTGFIDKNHNVLLKGRVACEINSGY 1121

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKPLQQLQESAR 852
            EL++TEL+ +    + +  ++ AL S F+   ++ E+    I  R  L K   +++E  +
Sbjct: 1122 ELVLTELILDNFLGNFEPEEIVALLSVFVYEGRTREEEMPVITPR--LTKGKDRIEEIYK 1179

Query: 853  KIAEIQNECKLEVNVDE--YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
             +  +  E ++ +  DE  ++E   R  L++V+Y W++G +F E+++++   EG+++R  
Sbjct: 1180 NMLSVFEEEQIPLTKDEAEFLERK-RFALVNVVYEWARGMSFKEIMEISPEAEGTVVRVI 1238

Query: 911  RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              LDE   +++ A+  +G  NL  K   A E ++R I+F+ SLYL
Sbjct: 1239 TWLDEICREVKTASVIIGNTNLHLKMTRAQELIKRDIVFAASLYL 1283


>gi|350409639|ref|XP_003488801.1| PREDICTED: helicase SKI2W-like [Bombus impatiens]
          Length = 1232

 Score =  422 bits (1084), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/552 (40%), Positives = 344/552 (62%), Gaps = 16/552 (2%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E+A ++ +ELD FQ+ ++  LE   +V V+AHTSAGKT VAEYAIA++ +   +VIYTSP
Sbjct: 283 ELAMSFPYELDTFQKQAILKLEEGCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSP 342

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYR+L ++F  VGL+TGD+ ++PNASCL++TTEIL+ MLY  SEVL+++ +VI
Sbjct: 343 IKALSNQKYRDLKRKFGSVGLLTGDLQINPNASCLIITTEILQSMLYCASEVLRDLEFVI 402

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ + ERG VWEES+I LP  + +V LSAT+ N   FA+W+    K+  +V+ T 
Sbjct: 403 FDEVHYINNDERGHVWEESVILLPQTVTLVMLSATVPNPLIFADWVGRTKKKKTYVISTL 462

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PLQHY++  G  G      +LV+DE   F  D + K   T  +       +N K  
Sbjct: 463 KRPVPLQHYLY-TGTDGKTKDNKFLVLDESGHFLLDGWYKA--TTAQNPKNQSNKNAKDV 519

Query: 303 GRMAKGGSGSGGSDIF---KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
            R+      +   +       +  +  +   PV+VF  SR+ C+  A+ +  +D  T+ E
Sbjct: 520 KRIPTQRQMTPKQEQVLWNAFISHLRTQNMLPVVVFMLSRKRCDMSAILLRNVDLTTETE 579

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           K T+   FQN +  L   DR LP + +M  LL+ GI +HHSG+LP++KE+VE+LFQ G+V
Sbjct: 580 KHTIRTFFQNNIRHLKGTDRQLPQVLMMQELLESGIGIHHSGILPILKEIVEMLFQTGVV 639

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K LFATETFAMG+NMPA+TVVF ++KK+DG + R +   EY+QM+GRAGRRG D  G+ I
Sbjct: 640 KLLFATETFAMGVNMPARTVVFDSIKKYDGTNFRILYPSEYVQMAGRAGRRGHDTAGMVI 699

Query: 480 IMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +M    +   N L++M+ G+   L S F+++Y  +LNL  R     T E +++ SF +  
Sbjct: 700 VMCRTLVPHFNELQNMMCGQAQNLESKFKVTYSMVLNL-RRLNESVTVEAMMRRSFKESP 758

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEAE--VAEYHKLKLDIAQLEKKLMSEITRPE-RV 595
             +   +   ++ KLE E + L    + +  ++++++L ++  +  K L S     + + 
Sbjct: 759 VIRNQNNYKIQLQKLENELSKLPPLTDLQKNLSDFYRLAVEYLEYLKYLKSYFYETQKKA 818

Query: 596 LYYLGSGRLIKV 607
           +  L +GR++ +
Sbjct: 819 IRCLTAGRVLLI 830



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 14/230 (6%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            E        ++E+  E  +L+ K+ D  +  +  E  N   +LK LG+ID D  V LKGR
Sbjct: 1011 EEHFEVVYERSELESERNKLQLKLSDEGLSLY-PEYTNAVALLKDLGYIDNDERVALKGR 1069

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             A  +   +ELL+TEL+           ++AAL S  I   ++  + NL  EL K     
Sbjct: 1070 VALQMG-NNELLITELILRNVLTVRQPAEIAALLSALIFQQRTDIEPNLTPELRK----- 1123

Query: 848  QESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEG 904
              +   I +I  E  LE     Y   T++P    L++V+Y W++  +FAE+++ TD+ EG
Sbjct: 1124 --NCLIIKQIHAE--LEALEQHYQLVTLQPLNFGLVEVVYDWAQAKSFAEIMEKTDVQEG 1179

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             I+R  ++L E L  ++ AA  +G+  L++K   AS  ++R I+F+ SLY
Sbjct: 1180 IIVRCIQQLSETLRDVKNAAITIGDPVLKEKMEEASTVIKRDIVFTASLY 1229


>gi|297745957|emb|CBI16013.3| unnamed protein product [Vitis vinifera]
          Length = 1082

 Score =  421 bits (1083), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/594 (41%), Positives = 355/594 (59%), Gaps = 40/594 (6%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 134 DMALDFPFELDTFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAP 193

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+   +F DVGL+TGDV+L P ASCL+MTTEILR MLY+G+++++++ WVI
Sbjct: 194 IKTISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVI 252

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 253 FDEVHYVNDVERGVVWEEVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTT 312

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA---SGR 304
            RP PL+H +F  G   LY + +              +TFL Q   GR   G+    +G 
Sbjct: 313 KRPVPLEHCIFYSGE--LYKICE-------------SETFLPQ---GRENPGRGKQNNGS 354

Query: 305 MAKGGSG-SGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
            +  GS  S  S    ++  + ++   PV++F FS+  C+  A  M+ +D  +  EK  +
Sbjct: 355 QSNWGSRRSEASLWLLLINKLSKKSLLPVVIFCFSKNRCDISADKMTGIDLTSSSEKHEI 414

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               + A   L   DRNLP +  +  LL+RGI VHH+GLLP++KE+VE+LF  G+VK LF
Sbjct: 415 HVFCERAFSRLKGSDRNLPQVIRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLF 474

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
           +TETFAMG+N PA+TVVF +++K+DG   R +  GEY QM+GRAGRRG D  G  ++M  
Sbjct: 475 STETFAMGVNAPARTVVFDSLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVMCR 534

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE  +   LK +++G    L S FRL+Y  IL+L+ R E +   E ++K SF +F  +K 
Sbjct: 535 DEIPDERDLKHVIVGSATRLASQFRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKK 592

Query: 543 LPDIGKKV-SKLEEEAASLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
           LP+  + +  KL +   +++   GE  + EY+ +  +  Q   +++  + +      +L 
Sbjct: 593 LPEKQQLLMRKLAQPTKTIECIKGEPTIEEYYDMYTEAEQHSNQILETVMQSSAAQQFLT 652

Query: 601 SGR-LIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLP-LISTL 652
            GR ++   +   D   GV   VVK PSA           YIV V  P L STL
Sbjct: 653 LGRVVVVKSQSVQDHLIGV---VVKAPSAS-------SKQYIVLVLKPHLPSTL 696



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 171/279 (61%), Gaps = 2/279 (0%)

Query: 678  ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQR 736
            EL+S+  +  P L+P+KD+K++D  +V+   +   L  K+  +  ++  + E  I+  + 
Sbjct: 802  ELKSKGHKYPPALDPLKDLKLKDMTLVETYYKWNSLLQKMADNKCHECVKLEEHIKLAKE 861

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
                  E+  L+ +M D  +Q+  D  + R  VL+++G IDAD VVQ+KGR AC +++G+
Sbjct: 862  LKRHKEEVNALRFQMSDEALQQMPD-FQGRIDVLQEIGCIDADLVVQIKGRVACEMNSGE 920

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            EL+ TE +F    +DL+  +  AL S  +   K++ + +L  +L++  Q+L  +A ++ E
Sbjct: 921  ELICTECLFENQLDDLEPEEAVALMSALVFQQKNTSEPSLTPKLSQAKQRLYNTAIRLGE 980

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            +Q + KL+++ +EY +  ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+  RLDE 
Sbjct: 981  LQAQFKLQISPEEYAQDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDET 1040

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              + R AA  +G   L KK  AAS +++R I+F+ SLY+
Sbjct: 1041 CREFRNAAAIMGNSALHKKMEAASNAIKRDIVFAASLYI 1079


>gi|340713859|ref|XP_003395452.1| PREDICTED: helicase SKI2W-like [Bombus terrestris]
          Length = 1232

 Score =  421 bits (1081), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 224/552 (40%), Positives = 345/552 (62%), Gaps = 16/552 (2%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E+A ++ +ELD FQ+ ++  LE   +V V+AHTSAGKT VAEYAIA++ +   +VIYTSP
Sbjct: 283 ELAMSFPYELDTFQKQAILKLEEGCNVFVAAHTSAGKTTVAEYAIALSQKHMTKVIYTSP 342

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQKYR+L ++F  VGL+TGD+ ++PNASCL++TTEIL+ MLY  SE+L+++ +VI
Sbjct: 343 IKALSNQKYRDLKRKFDSVGLLTGDLQINPNASCLIITTEILQSMLYCASEILRDLEFVI 402

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ + ERG VWEES+I LP  + +V LSAT+ N   FA+W+    K+  +V+ T 
Sbjct: 403 FDEVHYINNDERGHVWEESVILLPQTVTLVMLSATVPNPLIFADWVGRTKKKKTYVISTL 462

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PLQHY++  G  G      +LV+DE   F  D + K   T  +       +N K  
Sbjct: 463 KRPVPLQHYLY-TGTDGKTKDNKFLVLDESGHFLLDGWYKATTT--QNPKNQSNKNAKDV 519

Query: 303 GR--MAKGGSGSGGSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
            R  M +  +      ++   +  +  +   PV+VF  SR+ C+  A+ +  +D  T+ E
Sbjct: 520 KRKPMQRQMTPKQEQVLWNAFISHLRTQNMLPVVVFMLSRKRCDMSAVLLRNVDLTTETE 579

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           K T+   FQN +  L   DR LP + +M  LL+ GI +HHSG+LP++KE+VE+LFQ G+V
Sbjct: 580 KHTIRTFFQNNIRHLKGTDRQLPQVLMMRELLESGIGIHHSGILPILKEIVEMLFQTGVV 639

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K LFATETFAMG+NMPA+TVVF ++KK+DG + R +   EY+QM+GRAGRRG D  G+ I
Sbjct: 640 KLLFATETFAMGVNMPARTVVFDSIKKYDGTNFRILYPSEYVQMAGRAGRRGHDTAGMVI 699

Query: 480 IMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +M    +   N L++M+ G+   L S F+++Y  +LNL  R     T E +++ SF +  
Sbjct: 700 VMCQTLVPHFNELQNMMCGQAQNLESKFKVTYSMVLNL-RRLNESVTVEAMMRRSFKESP 758

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEAE--VAEYHKLKLDIAQLEKKLMSEITRPE-RV 595
                 +   ++ +LE E + L    + +  ++++++L ++  +  K L S     + + 
Sbjct: 759 VVINQNNYKIQLQRLENELSKLPPLTDLQKNLSDFYRLAVEYLEYLKYLKSYFYETQKKA 818

Query: 596 LYYLGSGRLIKV 607
           +  L +GR++ +
Sbjct: 819 IKCLTAGRVLLI 830



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 121/230 (52%), Gaps = 14/230 (6%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            E Q      ++E+  E  +L+ K+ D  +  +  E  N   +LK LG+ID D  V LKGR
Sbjct: 1011 EEQFEVVYERSELESERNKLQLKLSDEGLSLY-PEYTNAVALLKDLGYIDNDERVALKGR 1069

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             A  +   +ELL+TEL+           ++AAL S  I   ++  + NL  EL K     
Sbjct: 1070 VALQMG-NNELLITELILRNVLTVRQPAEIAALLSALIFQQRTDIEPNLTPELKK----- 1123

Query: 848  QESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEG 904
              +   I +I  E  LE     Y   T++P    L++V+Y W++  +FAE+++ TD+ EG
Sbjct: 1124 --NCLIIKQIHAE--LEALEQHYQLVTLQPLNFGLVEVVYDWAQAKSFAEIMEKTDVQEG 1179

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             I+R  ++L E L  ++ AA  +G+  L++K   AS  ++R I+F+ SLY
Sbjct: 1180 IIVRCIQQLSETLRDVKNAAITIGDPVLKEKMEEASTVIKRDIVFTASLY 1229


>gi|401840058|gb|EJT42980.1| SKI2-like protein [Saccharomyces kudriavzevii IFO 1802]
          Length = 855

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 223/534 (41%), Positives = 329/534 (61%), Gaps = 51/534 (9%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+K
Sbjct: 323 ARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIK 382

Query: 130 ALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           ALSNQK+R+  + F DV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +VI
Sbjct: 383 ALSNQKFRDFKETFDDVDIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVI 442

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D++RGVVWEE II LP  +K + LSAT+ N  +FA WI    ++  +V+ T 
Sbjct: 443 FDEVHYVNDQDRGVVWEEVIIMLPQHVKFILLSATVPNTYEFANWIGRTKQKNIYVISTP 502

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG---RRENGKA--- 301
            RP PL+  ++      L  V+++  +F + NF K ++        G   + + GK    
Sbjct: 503 KRPVPLEINIW--TKKELIPVINQNSEFLDANFRKHKEILNGDSTKGIPSKSDTGKGGST 560

Query: 302 ------------------------SGRMAKGGSGSGGSDIFK--------------IVKM 323
                                   + R    G+G+ GS+  K              IV  
Sbjct: 561 ARGGRGGGNTRGGRGGRGNSTRGNANRGGSRGAGAMGSNKRKFFTQDGPSKKTWPEIVNY 620

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           + +R+  P++VF FS++ CE++A  +  ++F   +EK  +    + ++  L +EDR+LP 
Sbjct: 621 LRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKKEDRDLPQ 680

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           I     LL+RGIAVHH GLLP++KEL+E+LF +G +K LFATETFAMGLN+P +TV+F++
Sbjct: 681 ILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTRTVIFSS 740

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
           ++K DG+  R +  GE+ QM+GRAGRRG D  G  I+M  +  + + T K++ +G P  L
Sbjct: 741 IRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSLATFKEVTMGVPTRL 800

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
            S F L+Y  ILNL+ R E     E +IK SF +   E   P+  K++  L+ E
Sbjct: 801 QSQFTLTYNMILNLL-RIEA-LRVEEMIKYSFSENAKETLQPENEKQIKLLQAE 852


>gi|308491074|ref|XP_003107728.1| hypothetical protein CRE_12774 [Caenorhabditis remanei]
 gi|308249675|gb|EFO93627.1| hypothetical protein CRE_12774 [Caenorhabditis remanei]
          Length = 1297

 Score =  420 bits (1080), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/579 (39%), Positives = 340/579 (58%), Gaps = 45/579 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y F LDPFQ+ SV C+ER ES+ V+AHTSAGKT VAEYAIA+    K R +YTSP+
Sbjct: 289 MARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPI 348

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+  Q F DVGL+TGD+ L P A+CL+MTTEILR MLY GS+V++++ WV+F
Sbjct: 349 KALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSDVIRDLEWVVF 408

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ + ERG VWEE +I LP  +K+V LSAT+ N  +FA+W+  +  +  +V+ T+ 
Sbjct: 409 DEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRRINVISTER 468

Query: 249 RPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDT----FLKQKIGG----- 294
           RP PL+H+++  G  G     L+ ++D   QF    +   +D+    + K K+ G     
Sbjct: 469 RPVPLEHFLY-TGQDGKTQKDLFKIIDRNGQFLLKGYNDSKDSKAKIYEKDKVVGPGGAA 527

Query: 295 -----------------RRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ-PVIVFS 336
                              + G + G   K   G    +I+  +   M    Q P++VF 
Sbjct: 528 GRGNQRGGARGGGASSRSNQGGNSGG--VKNWPGKNDKNIYLNLINFMRCSDQLPMVVFV 585

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FSR+ C+++A  ++ ++  T+ EK  V   F   +  L   D+ LP +  M  L  RG A
Sbjct: 586 FSRKRCDENAQMLASMNLTTEVEKQHVRTFFSQCIQRLKGSDKELPQVLTMKELCLRGFA 645

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
           VHHSG+LP++KE+VELLFQ+G VK LFATETFAMG+NMPA+ VVF +V K DG   R + 
Sbjct: 646 VHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSVTKHDGSERRLLN 705

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQM--EMNTLKDMVLGKPAPLVSTFRLSYYSIL 514
            GEY QM+GRAGRRG D  G  +I+  +Q     + LK+++ G+   L S FR++Y  IL
Sbjct: 706 PGEYTQMAGRAGRRGLDSTGTVVIICKDQTIPLPDVLKNLISGQALRLESKFRVTYSMIL 765

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD------ASGEAEV 568
           NL+ R E Q   E +++ S+ +    +   D  K + +L++    +        +  +++
Sbjct: 766 NLL-RVE-QLKIEDMLQRSYVESDSLRESKDKQKMLKELKKSLEEMKLVECETCTPNSQL 823

Query: 569 AEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
            +YH    +     + +  ++     +  +L SGR + V
Sbjct: 824 RDYHDALANYVLKRESIWPKLNDENVINKFLCSGRFVIV 862



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 21/206 (10%)

Query: 758  KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
            +  +E +NR +VL+ L  ++   +V LKGR  C I    ELL+TEL+ +  F+     ++
Sbjct: 1101 RLSEEYQNRLKVLESLNFVEKK-MVSLKGRIGCEIH-HQELLITELILDYKFHKRSPPEL 1158

Query: 818  AALASCFIPVDKSSEQIN---------LRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            AAL S       S  ++          +R  +   L +L+  A K     ++   E+  D
Sbjct: 1159 AALLSTLTCQYNSGRELQFAPDSIFGEIRESVNSVLSRLEAVASKHKSHISDLGSEIRFD 1218

Query: 869  EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG 928
                      LM+V+Y W+KG  F  +++MTD  EG I++  +RLDE    +R A + VG
Sbjct: 1219 ----------LMEVVYEWAKGTPFYRIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVG 1268

Query: 929  EVNLEKKFAAASESLRRGIMFSNSLY 954
            +  L +K    S S+RR I+F+ SLY
Sbjct: 1269 DPALVEKMEEVSASIRRDIVFAASLY 1294


>gi|149238608|ref|XP_001525180.1| antiviral helicase SKI2 [Lodderomyces elongisporus NRRL YB-4239]
 gi|146450673|gb|EDK44929.1| antiviral helicase SKI2 [Lodderomyces elongisporus NRRL YB-4239]
          Length = 1261

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 229/531 (43%), Positives = 319/531 (60%), Gaps = 52/531 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+T+ FELD FQ+ +V  LE+ +SV V+AHTSAGKT VAEYAIAMA R+  + IYTSP+
Sbjct: 295 MARTWPFELDVFQKEAVFHLEQGDSVFVAAHTSAGKTVVAEYAIAMAKRNMTKCIYTSPI 354

Query: 129 KALSNQKYRELHQEFKDV--GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+R+  + FKDV  GL+TGDV ++P+A+CL+MTTEILR MLYRG++++++V +V
Sbjct: 355 KALSNQKFRDFKETFKDVDVGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFV 414

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D +RGVVWEE II LP  +K + LSAT+ N  +FA W+    ++  +V+ T
Sbjct: 415 IFDEVHYVNDIDRGVVWEEVIIMLPDHVKYILLSATVPNTFEFANWVGRTKQKDIYVIST 474

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE--------- 297
             RP PL+ YV     + L+ VVD   +F E+ F   +D     K   ++E         
Sbjct: 475 PKRPVPLEIYV--SAKNKLFKVVDANRRFLENEFKAHKDVLEAGK--AKKELPSTSMGLG 530

Query: 298 ----------------------------------NGKASGRMAKGGSGSGGSDIFKIVKM 323
                                              G  SG   +G  G   +    +V  
Sbjct: 531 SRGGPGGTARGGNRGGSRGGSRGGGQRGGVLASNRGNFSGPRRQGNDGPNKNTWPDLVHY 590

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           +      P ++F FS+++CE++A S+  +DF    EK  +      AV  L +EDR LP 
Sbjct: 591 LKLNSLLPAVIFVFSKKKCEEYADSLRGIDFCNSREKSEIHMFIDRAVSRLKKEDRELPQ 650

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           I  +  +L RGIAVHH GLLP++KE +E+LF + LVK LFATETFAMGLN+P +TVVF++
Sbjct: 651 IMKIRDMLSRGIAVHHGGLLPIVKECIEILFAKTLVKVLFATETFAMGLNLPTRTVVFSS 710

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
            +K DG S R +  GE+ QMSGRAGRRG D  G  IIM  ++ +     K++ LG P  L
Sbjct: 711 TRKHDGRSFRNLLPGEFTQMSGRAGRRGLDKTGTVIIMAYNDPLSPTDFKEVALGAPTKL 770

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
           +S FRL+Y  ILNL+ R E     E +IK+SF +   +  LP+  ++   L
Sbjct: 771 LSQFRLTYNMILNLL-RIEA-LKVEEMIKHSFSENSSQVLLPENQRRYDYL 819



 Score =  119 bits (299), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 128/227 (56%), Gaps = 8/227 (3%)

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
            ++++  +N EI+ L+  + D  +    D  + R  VL  LG ID    V LKGR AC I+
Sbjct: 1038 YRKRYLINKEIEGLQRLISDENLDLLPD-YEQRLDVLMTLGFIDPQHNVVLKGRVACEIN 1096

Query: 794  TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ----INLRMELAKP-LQQLQ 848
            +G EL++TEL+ +    D +  ++ AL SCF+   ++ E+    I  R+E  K  + ++ 
Sbjct: 1097 SGWELILTELVLDNFLGDFEPAEIVALLSCFVYEGRTREEEPPLITPRLEEGKSKILKIA 1156

Query: 849  ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
            +   K+  I+    L    +++VES  R  L++V+Y W+ G +F E++QM+   EG+I+R
Sbjct: 1157 DQLLKVF-IEKRVLLTSEEEDFVESK-RFALVNVVYEWANGLSFNEIMQMSVEAEGTIVR 1214

Query: 909  SARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               RLDE   +++ AA  +G+  L  K A A E ++R I+F  SLYL
Sbjct: 1215 VITRLDEICREVKNAALIIGDSKLHLKMAEAQEKIKRDIVFCASLYL 1261


>gi|406861292|gb|EKD14347.1| DSHCT domain-containing protein [Marssonina brunnea f. sp.
           'multigermtubi' MB_m1]
          Length = 1281

 Score =  419 bits (1077), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/547 (42%), Positives = 323/547 (59%), Gaps = 58/547 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 306 DMAREWPFELDTFQKEAVYHLETGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 365

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F +VG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 366 IKALSNQKFRDFRQIFDEVGILTGDVQIAPEASCLIMTTEILRSMLYRGADLIRDVEFVI 425

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 426 FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 485

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL-KQKI-------------- 292
            RP PL+HY++     G+Y +VD +++F E  +    D    K K+              
Sbjct: 486 KRPVPLEHYIW--AEKGIYKIVDAEKRFLEKGWKDANDVLSGKNKVKALPPAEANTRGGG 543

Query: 293 -----------------------------GGRRENGKASGRM----AKGGSGSGGSD--- 316
                                        GG      A G M      GG  S   D   
Sbjct: 544 NARGGRGQNQRGGNQRGGGQRGGAPQRGRGGPPRASHAPGHMGRGGRPGGRTSAAQDKTL 603

Query: 317 IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNE 376
              +V+ + +    P  +F FS++ CE++A ++S  DF T  EK  +  + + ++  L  
Sbjct: 604 WVHLVQFLKKESLLPACIFVFSKKRCEENADALSNQDFCTATEKSAIHMIIEKSIARLKP 663

Query: 377 EDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPA 436
           EDR LP I  +  +L RGIAVHH G+LP++KE+VE+LF + LVK LFATETFAMGLN+P 
Sbjct: 664 EDRVLPQIVRLRDMLGRGIAVHHGGMLPIVKEVVEMLFAQTLVKVLFATETFAMGLNLPT 723

Query: 437 KTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEMNTLKD 493
           +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+     E   +  L+ 
Sbjct: 724 RTVVFSGYRKHDGHSFRNLLPGEYTQMAGRAGRRGLDPVGSVIIVAPGGGEAPPVTELRQ 783

Query: 494 MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL 553
           M+LG P+ L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LP+  K V   
Sbjct: 784 MILGDPSKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSEHATQQLLPEHEKAVKVS 841

Query: 554 EEEAASL 560
           E + A +
Sbjct: 842 EADLAKI 848



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 136/265 (51%), Gaps = 7/265 (2%)

Query: 693  VKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR 752
            +KDM++ D    +L  +++E      A  L   Q          +  +   I QL+  M 
Sbjct: 1022 LKDMQLRD----NLAKRMDEATIAQKAECLKCPQFVKHFAMCHDQWLIQENISQLRQLMS 1077

Query: 753  DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
            D  +Q   D  + R +VLK L  +D    V+LKG+ AC I + DEL++TEL+ +      
Sbjct: 1078 DQNLQLLPD-YEQRIQVLKDLNFVDESSRVELKGKVACEIHSADELVLTELILDNVLAPY 1136

Query: 813  DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
            +  ++ AL S F+  +K+    NL   L + ++ + E + K+ E Q   ++ ++ D+  +
Sbjct: 1137 EPAEIVALLSAFVFQEKTDTVPNLTGNLERGMKTIIEISEKVNERQTYHQVILSSDDSND 1196

Query: 873  STVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
               RP   LM+V+Y W++G +F  +  +TD+ EG+I+R   RLDE   +++ AA+ +G+ 
Sbjct: 1197 FVSRPRFGLMEVVYEWARGMSFKNITDLTDVLEGTIVRVITRLDETCREVKNAARIIGDP 1256

Query: 931  NLEKKFAAASESLRRGIMFSNSLYL 955
             L  K     E ++R I    SLY+
Sbjct: 1257 ELFAKMQTCQEMIKRDITAVASLYM 1281


>gi|307201503|gb|EFN81266.1| Helicase SKI2W [Harpegnathos saltator]
          Length = 1209

 Score =  419 bits (1076), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 225/546 (41%), Positives = 335/546 (61%), Gaps = 18/546 (3%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ ++  LE N +V V+AHTSAGKT VAEYAIA++ +   RVIYTSP+K
Sbjct: 277 AITFEYELDTFQKQAILKLEENCNVFVAAHTSAGKTTVAEYAIALSQKHMTRVIYTSPIK 336

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYR+  ++++ VGL+TGD+ ++ NASCL+MTTEIL+ MLY  S+VL+++ +VIFD
Sbjct: 337 ALSNQKYRDFKKKYESVGLLTGDLQINQNASCLIMTTEILQSMLYCASDVLRDLEFVIFD 396

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ + +RG VWEE +I LP  I +V LSAT+ N   FA+W+  + K+  +V+ T  R
Sbjct: 397 EVHYINNEDRGHVWEEIVILLPQTINIVMLSATVPNPVVFADWVGRIKKRKMYVISTLKR 456

Query: 250 PTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           P PL HY++  G  G      +LV+D   QF  D + K  +   K     + +N K   R
Sbjct: 457 PIPLLHYLY-TGTDGKTKDDKFLVLDGNGQFLLDGWFKATNASNK-----KSKNAKDCRR 510

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
           M               +  +      PV+VF+ SR+ C+ +A ++  LD  T  EK  V 
Sbjct: 511 MTPKQEEVLWR---AFISHLNSNDMLPVVVFTLSRKRCDVNAATLRNLDLTTAREKHQVH 567

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
             FQN +  L   DR LP + +M  LL++G+ +HHSG+LP+++E+VE+LFQ G+VK LFA
Sbjct: 568 VFFQNNIKNLKGSDRELPQVLMMQELLQKGVGIHHSGILPILREIVEMLFQSGVVKLLFA 627

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-D 483
           TETFAMG+NMPA+TVVF +++K+DG+  R +   EYIQM+GRAGRRG D  G  ++M  +
Sbjct: 628 TETFAMGVNMPARTVVFDSIRKFDGNQFRTLFPTEYIQMAGRAGRRGHDTTGTVMVMCRN 687

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           E    N LK M+ G    L S F+++Y  +LNL  R     T E +++ SF +       
Sbjct: 688 EVPHFNDLKPMMCGGAQTLESKFKVTYSMLLNL-RRVNESVTVEAMMRKSFKESPLASQE 746

Query: 544 PDIGKKVSKLEEEAASLDASGEAE--VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
                ++ KLE E ++L    + +  ++ +H++ +D  +  K L   +  P++    L  
Sbjct: 747 AMYTHELRKLERELSNLPTLTDMQKMLSTFHQVAVDYLEDIKFLNPYMFEPKKAAKNLTE 806

Query: 602 GRLIKV 607
           GR++ V
Sbjct: 807 GRVLIV 812



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 126/230 (54%), Gaps = 14/230 (6%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            E Q R    + ++  +++QL+ K+ D  +  + D + N   +LK L +ID+D  V LKGR
Sbjct: 988  EEQFRPVFERNQLESKMRQLQLKLSDEGMTLYPDYM-NMLTLLKHLRYIDSDERVALKGR 1046

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             A  + + +ELL+TEL+       L   ++AAL S  I   ++  +  L + L      +
Sbjct: 1047 VALQMGS-NELLITELILKNVLTVLQPAEIAALLSALIFHQRTDIEPQLTLNLINGRNVM 1105

Query: 848  QESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEG 904
            +E   ++  ++   +L         ST+ P    LM+V+Y W++  +FAE+++ TD+ EG
Sbjct: 1106 KEVHAELEALEQSHEL---------STLSPLNCGLMEVVYEWAQAKSFAEIMKKTDVQEG 1156

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             I+R  ++L E L  ++ AA  +G+  L++K   AS +++R I+F+ SLY
Sbjct: 1157 IIVRCIQQLGETLRDVKNAAVTIGDPVLKEKMEEASTAIKRDIVFAVSLY 1206


>gi|298705994|emb|CBJ29115.1| DEAD box helicase [Ectocarpus siliculosus]
          Length = 1630

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/525 (43%), Positives = 312/525 (59%), Gaps = 39/525 (7%)

Query: 70   AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
            A  + F LD FQ+ +VA LER E V VSAHTSAGKT VAEYAIAMA +   R IYTSP+K
Sbjct: 586  AHRFPFTLDGFQKQAVARLERAECVFVSAHTSAGKTVVAEYAIAMAQQHMTRAIYTSPIK 645

Query: 130  ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
            ALSNQKYR+    F DVGL+TGDV+++P ASCL+MTTEILR MLYRG+++++++ WVIFD
Sbjct: 646  ALSNQKYRDFKTRFGDVGLITGDVSINPEASCLIMTTEILRSMLYRGADLIRDIEWVIFD 705

Query: 190  EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
            E+HY+ D ERGVVWEE II LP    M+FLSAT  N  +F +WI    ++P HV+ T +R
Sbjct: 706  EVHYVNDSERGVVWEEVIIMLPEHANMIFLSATTPNTVEFCDWIGRTKRKPVHVITTTYR 765

Query: 250  PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
            P PL+H +    G+ L+ ++D   +F  + +       +       +E+ KA+       
Sbjct: 766  PVPLEHNLL--AGNELHPIMDNFGKFESNGYNAAAAMLMS------KEDKKAAAGRGGQR 817

Query: 310  SGSGGSDIF--------------------------KIVKMIMERKFQPVIVFSFSRRECE 343
             G G                                ++K + +    PV+VFSFS+++C+
Sbjct: 818  GGGGRGGRGGGRGGGGGRGGRGGRGGGQGSRAQWQSLIKKLEKDGLLPVVVFSFSKKKCQ 877

Query: 344  QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLL 403
            + A  +S +   T +EK  +      AV  L ++D  LP +  +  +L RGI VHH GLL
Sbjct: 878  ECAEGLSSVTLTTAKEKSEIHLFCATAVKRLQDQDAQLPQVLNLKEMLSRGIGVHHGGLL 937

Query: 404  PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQM 463
            P++KE+VE+ F  GLVK LFATETFAMG+NMPA+TVVF   +K DG   R +  GEY QM
Sbjct: 938  PILKEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQM 997

Query: 464  SGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG 522
            +GRAGRRG D  G  II    E   +  LK M+ G    L S FRL +  ILNL+ R E 
Sbjct: 998  AGRAGRRGLDKVGTVIITCWSEPPPLVNLKMMLTGAATKLESQFRLKWNMILNLL-RVE- 1055

Query: 523  QFTAEHVIKNSFHQFQYEKAL--PDIGKKVSKLEEEAASLDASGE 565
              + E ++K SF +F+ ++ L   D+ K + K  +   +L A+ E
Sbjct: 1056 DMSVEDMMKRSFSEFRTQRELGAKDLPKVMKKCTDALNNLKATAE 1100



 Score =  135 bits (341), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 129/221 (58%), Gaps = 2/221 (0%)

Query: 735  QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDT 794
            Q++ ++   I+ L   +    +  F D  + R  VL+ LG+++ +  VQLKGR AC I+T
Sbjct: 1411 QKRDKLERRIELLGHALSSEALSLFPD-FQQRLGVLRSLGYVEGN-TVQLKGRVACEINT 1468

Query: 795  GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKI 854
             DEL+ TE++F      LD  ++A + S  I  +K+  +  L   L   + Q+ + AR +
Sbjct: 1469 CDELIATEMVFENVLESLDPPEIAGILSALIFQEKTQNEPPLTDRLQTAVAQVLKIARSL 1528

Query: 855  AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLD 914
              +Q +  L V+ +E ++  +   L+DV+Y W++G  F E+ Q+T + EGS++R+  RLD
Sbjct: 1529 GRLQRDHGLPVDPEENIKLNLNLGLVDVVYEWARGVPFCEITQITLVQEGSVVRAITRLD 1588

Query: 915  EFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            E   ++R AA+ +G+  L +K  A S+ ++R I+F+ SLY+
Sbjct: 1589 ELCREVRNAARVIGDPTLYRKMEATSQLIKRDIVFAASLYV 1629


>gi|268536308|ref|XP_002633289.1| Hypothetical protein CBG06018 [Caenorhabditis briggsae]
          Length = 1266

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 232/574 (40%), Positives = 338/574 (58%), Gaps = 44/574 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y F LD FQ+ SV C+ER ES+ V+AHTSAGKT VAEYAIA+    K R +YTSP+
Sbjct: 282 MARKYPFTLDYFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPI 341

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+  Q F DVGL+TGD+ L P A+CL+MTTEILR MLY GSEV++++ WV+F
Sbjct: 342 KALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVF 401

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ + ERG VWEE +I LP  +K+V LSAT+ N  +FA+W+  +  +  +V+ TD 
Sbjct: 402 DEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDK 461

Query: 249 RPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA-- 301
           RP PL+H+++  G  G     L+ ++D   QF    +   +D+  K       E  KA  
Sbjct: 462 RPVPLEHFLY-TGQDGKTQRDLFKIIDRDGQFILKGYNDAKDSKTKSN-----EKEKAGG 515

Query: 302 ------------------SGRMAKGGSGSGGSDIFKIVKMIMERKFQ-PVIVFSFSRREC 342
                             +    K   G    +I+  +   M+   Q P+++F FSR+ C
Sbjct: 516 SGGRGGSRGGGGMKRGGGNSGGGKNWPGKNDKNIYLNLINFMKCADQLPMVIFVFSRKRC 575

Query: 343 EQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
           + +A  +S ++  T+ EK  V   F   +  L   D+ LP +  M  L  RG AVHHSG+
Sbjct: 576 DDNAQMLSSMNLTTEVEKQHVRTFFSQCIQRLKGSDKELPQVLTMRELCLRGFAVHHSGI 635

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LP++KE+VELLFQ+G VK LFATETFAMG+NMPA+ VVF ++ K DG   R +  GEY Q
Sbjct: 636 LPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSITKHDGTERRLLNPGEYTQ 695

Query: 463 MSGRAGRRGKDDRG-ICIIMVDEQMEM-NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           M+GRAGRRG D  G + II  D  + + + LK+++ G+   L S FR++Y  ILNL+ R 
Sbjct: 696 MAGRAGRRGLDSTGTVVIICKDSSIPLPDVLKNVISGQALRLESKFRVTYSMILNLL-RV 754

Query: 521 EGQFTAEHVIKNSF-------HQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           E Q   E +++ S+          + +KAL ++ + + ++E        +  +++ +YH 
Sbjct: 755 E-QLKIEDMLQRSYVESDSLRESKEKKKALCEMRRALEEVEPIECE-TCTPNSQLRDYHD 812

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
             +   Q    +  ++     +   LGSGR + V
Sbjct: 813 AVIAFVQKRANIWPKLNDENVINKLLGSGRFLIV 846



 Score = 95.9 bits (237), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 5/198 (2%)

Query: 758  KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
            +  DE +NR +VL+ LG ++   +V LKGR  C I    ELL+TEL+ +  F+     ++
Sbjct: 1070 RLSDEYQNRLKVLESLGFVEKK-MVSLKGRIGCEIH-HQELLITELILDYKFHKRTPAEL 1127

Query: 818  AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKI-AEIQNECKLEVNVDEYVESTVR 876
            AAL S         +++    E      ++ ES + +   +++E          V   +R
Sbjct: 1128 AALLSTLTCQYNCGKEVTF--EPNSVFAEICESVKSVLTRLESEASKHRAHISDVGCEIR 1185

Query: 877  PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
              LM+V+Y W+ G  F ++++MTD  EG I++  +RLDE    +R A + VG+  L +K 
Sbjct: 1186 FDLMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVEKM 1245

Query: 937  AAASESLRRGIMFSNSLY 954
               S S+RR I+F+ SLY
Sbjct: 1246 EEVSASIRRDIVFAASLY 1263


>gi|133930973|ref|NP_502084.2| Protein SKIH-2 [Caenorhabditis elegans]
 gi|115530064|emb|CAA92767.2| Protein SKIH-2 [Caenorhabditis elegans]
          Length = 1266

 Score =  417 bits (1073), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 219/488 (44%), Positives = 308/488 (63%), Gaps = 27/488 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y F LDPFQ+ SV C+ER ES+ V+AHTSAGKT VAEYAIA+    K R +YTSP+
Sbjct: 285 MARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPI 344

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+  Q F DVGL+TGD+ L P A+CL+MTTEILR MLY GSEV++++ WV+F
Sbjct: 345 KALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVF 404

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ + ERG VWEE +I LP  +K+V LSAT+ N  +FA+W+  +  +  +V+ TD 
Sbjct: 405 DEVHYINNEERGHVWEEVLIMLPAHVKIVMLSATVPNCVEFADWVGRIKNRKINVISTDR 464

Query: 249 RPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE------ 297
           RP PL+H+++  G  G     L+ ++D   QF    +   +D+  K KI  + +      
Sbjct: 465 RPVPLEHFLY-TGQDGKTQKDLFKIIDRSGQFILKGYNDAKDS--KAKIYEKEKAGGAGG 521

Query: 298 --------NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQ-PVIVFSFSRRECEQHAMS 348
                    G       +   G    +I+  +   M+   Q P++VF FSR+ C+++A  
Sbjct: 522 RGTQRGGGRGGGGNGGGRNWPGKNDKNIYLNLINYMKCSDQLPMVVFVFSRKRCDENAQM 581

Query: 349 MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
           ++ ++  T+ EK  V   F   V  L   D+ LP +  M  L  RG AVHHSG+LP++KE
Sbjct: 582 LASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLTMRDLCLRGFAVHHSGILPILKE 641

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           +VELLFQ+G VK LFATETFAMG+NMPA+ VVF ++ K DG   R +  GEY QM+GRAG
Sbjct: 642 VVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTERRMLNPGEYTQMAGRAG 701

Query: 469 RRGKDDRGICIIMVDEQM--EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTA 526
           RRG D  G  II+  +    + + LK+++ G+   L S FR++Y  ILNL+ R E Q   
Sbjct: 702 RRGLDLTGTVIIICKDSTVPQPDVLKNLISGQALRLESKFRVTYSMILNLL-RVE-QLKI 759

Query: 527 EHVIKNSF 534
           E +++ S+
Sbjct: 760 EDMLQRSY 767



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 21/203 (10%)

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            +E  NR +VL+ L  ++   +V LKGR  C I    ELL+TEL+ +  F+     ++AAL
Sbjct: 1073 EEYHNRLKVLEALNFVE-QKMVSLKGRIGCEIH-HQELLITELILDYKFHQRSPAELAAL 1130

Query: 821  ASCFIPVDKSSEQIN---------LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
             S       S  ++          +   +   L +L+  A K     ++   E+  D   
Sbjct: 1131 LSTLTCQYNSGREMQFGGDTVFGEISESVKSVLTRLESVASKHKSQISDLGCEIRFD--- 1187

Query: 872  ESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
                   LM+V+Y W+ G  F ++++MTD  EG I++  +RLDE    +R A + VG+  
Sbjct: 1188 -------LMEVVYEWANGTPFYQIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPA 1240

Query: 932  LEKKFAAASESLRRGIMFSNSLY 954
            L +K    S S+RR I+F+ SLY
Sbjct: 1241 LVEKMEEVSASIRRDIVFAASLY 1263


>gi|341880403|gb|EGT36338.1| hypothetical protein CAEBREN_19438 [Caenorhabditis brenneri]
          Length = 1187

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/494 (44%), Positives = 309/494 (62%), Gaps = 34/494 (6%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y F LDPFQ+ SV C+ER ES+ V+AHTSAGKT VAEYAIA+    K R +YTSP+
Sbjct: 201 MARKYPFSLDPFQQSSVLCMERGESLFVAAHTSAGKTVVAEYAIALCQAHKTRAVYTSPI 260

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+  Q F DVGL+TGD+ L P A+CL+MTTEILR MLY GSEV++++ WV+F
Sbjct: 261 KALSNQKFRDFKQIFGDVGLVTGDIQLHPEAACLIMTTEILRSMLYNGSEVIRDLEWVVF 320

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ + ERG VWEE +I LP  +K+V LSAT+ N  +FA+W+  +  +  +V+ TD 
Sbjct: 321 DEVHYINNEERGHVWEEVLIMLPTHVKIVMLSATVPNCVEFADWVGRIKNRRINVISTDR 380

Query: 249 RPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG---- 299
           RP PL+H+++  G  G     L+ ++D   QF    +   +++  K KI   +EN     
Sbjct: 381 RPVPLEHFLY-TGQDGKTQRDLFKIIDRNGQFILKGYNDAKES--KAKI-YEKENSGAGG 436

Query: 300 ----------------KASGRMAKGGSGSGGSDIFKIVKMIMERKFQ-PVIVFSFSRREC 342
                              G   +   G    +I+  +   M+   Q P++VF FSR+ C
Sbjct: 437 RGMVRGGGRGGGRGNGGGGGGGGRNWPGKNDKNIYLNLINFMKCSDQLPMVVFVFSRKRC 496

Query: 343 EQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
           + +A  +S ++  T+ EK  V   F   +  L   D+ LP +  M  L  RG AVHHSG+
Sbjct: 497 DDNAQMLSSMNLTTEVEKQHVRSFFAQCIQRLKGSDKELPQVLTMRELCLRGFAVHHSGI 556

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LP++KE+VELLFQ+G VK LFATETFAMG+NMPA+ VVF ++ K DG   R +  GEY Q
Sbjct: 557 LPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHDGTEKRLLNPGEYTQ 616

Query: 463 MSGRAGRRGKDDRGICIIMVDEQM--EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           M+GRAGRRG D  G  +I+  +Q   + + LK+++ G+   L S FR++Y  ILNL+ R 
Sbjct: 617 MAGRAGRRGLDSTGTVVIICKDQSVPQPDILKNVICGQALRLESKFRVTYAMILNLL-RV 675

Query: 521 EGQFTAEHVIKNSF 534
           E Q   E +++ S+
Sbjct: 676 E-QLKIEDMLQRSY 688



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 15/200 (7%)

Query: 761  DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
            +E  NR +VL+ L  ++   +V LKGR AC I    ELL+TEL+ +  F+     ++AAL
Sbjct: 994  EEYNNRLKVLEALNFVEK-KMVSLKGRIACEIH-HQELLITELILDYKFHQRSPAELAAL 1051

Query: 821  ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY------VEST 874
             S         +++    +      Q+ ES + +       +L+    +Y      +   
Sbjct: 1052 LSTLTCQYNCGKELQFGSDTV--FGQISESIKSVL-----TRLDAVAAKYKSQISDIGCE 1104

Query: 875  VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
            +R  LM V+Y W+ G  F ++++MTD  EG I++  +RLDE    +R A + VG+  L +
Sbjct: 1105 IRFDLMQVVYEWANGTPFYKIMEMTDCQEGLIVKCIQRLDEVCKDVRNAGRIVGDPALVE 1164

Query: 935  KFAAASESLRRGIMFSNSLY 954
            K    S S+RR I+F+ SLY
Sbjct: 1165 KMEEVSASIRRDIVFAASLY 1184


>gi|449297011|gb|EMC93030.1| hypothetical protein BAUCODRAFT_37952 [Baudoinia compniacensis UAMH
           10762]
          Length = 1288

 Score =  417 bits (1071), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 241/622 (38%), Positives = 353/622 (56%), Gaps = 85/622 (13%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA+T+ FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 305 EMARTWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 364

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F DVG++TGDV + P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 365 IKALSNQKFRDFRTTFDDVGILTGDVQIRPEASCLIMTTEILRSMLYRGADLIRDVEFVI 424

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 425 FDEVHYVNDLERGVVWEEVIIMLPEHVTLICLSATVPNTYEFASWVGRTKKKDIYVISTP 484

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL-KQKI-------------- 292
            RP PL+HY++      ++ +VD  + F E  +    D    + K+              
Sbjct: 485 KRPVPLEHYLW--ADKKMFKIVDANKNFIEKGWKDANDAMTGRDKVLAAEQKAKEKEDAA 542

Query: 293 ---------------------------GGRRENGKASGRMAKGGSGS------------- 312
                                      GG ++ G+  G++A  G G+             
Sbjct: 543 VAAGRGGRGGRGQGGRGQQQRGGPNQRGGPQQRGR--GQVANRGQGNIARTGRGGGRTTA 600

Query: 313 -GGSDIF-KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
               +I+  +V+ + + +  P  +F FS++ CE+ A +++ LDF T  E+  +  + + +
Sbjct: 601 AQDRNIWVHLVQHLRKEELLPCCIFIFSKKRCEESADALANLDFCTASERSAIHMILEKS 660

Query: 371 VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
           +  L  +DR LP I  +  LL RGIAVHH GLLP++KE VE+LF + LVK LFATETFAM
Sbjct: 661 LARLKPDDRQLPQIRRIRELLSRGIAVHHGGLLPIVKECVEILFAKTLVKVLFATETFAM 720

Query: 431 GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM---VDEQME 487
           GLN+P +TVVF+  +K+D  + R +  GEY QM+GRAGRRG D  G  I++    DE   
Sbjct: 721 GLNLPTRTVVFSGFRKYDNKAFRDLLPGEYTQMAGRAGRRGLDTVGYVILVSPGADEAPP 780

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
              L+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  
Sbjct: 781 AARLRQMMLGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHE 838

Query: 548 KKVSKLEEEAA------------SLDASGEAEVAEYHKL--KLDIAQLEKKLMSEITRPE 593
           K++   E + A             ++   EA + EY  L  +L +A L   +   + +P+
Sbjct: 839 KQIKLSEADLAKVKREPCDTCDKDIERCHEAGI-EYDMLTKQLHLAMLATPVGRRMFQPK 897

Query: 594 RVLYYLGSGRL----IKVREGG 611
           R++ + G   +    + +REG 
Sbjct: 898 RLIVFKGENDIRTAGVLLREGA 919



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 129/244 (52%), Gaps = 12/244 (4%)

Query: 723  NKSQDENQIRC--FQRKAEVNHEIQQLKSK-------MRDSQIQKFRDELKNRSRVLKKL 773
            N +Q  + I C  F +   + H++  +K +       M D  +Q   D  + R  VLK L
Sbjct: 1046 NIAQGRDCIHCPDFPKHYAMAHDVWVIKDQIDSIRQLMSDQNLQLLPD-YQQRISVLKDL 1104

Query: 774  GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ 833
            G ID +  V+LKG+ AC I + DEL++TEL+      + +  ++ AL S F+  +K+   
Sbjct: 1105 GFIDENSRVELKGKVACEIHSADELVLTELVLENVLAEFEPEEIVALLSSFVFQEKTEST 1164

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF--LMDVIYCWSKGAT 891
             N+   L +  + + + + K+   Q   ++ ++ D+  +   RP   L++V+Y W++G  
Sbjct: 1165 PNMTPALERGQETIVKISEKVNHYQTLHQVILSADDSNDFVSRPRFGLVEVVYEWARGMP 1224

Query: 892  FAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
            F+ +  +TD+ EG+I+R   RLDE   +++ AA+ +G+  L  K     E ++R I  + 
Sbjct: 1225 FSRITDLTDVLEGTIVRVITRLDETCREVKNAARIIGDPTLFTKMQTCQELIKRDICATA 1284

Query: 952  SLYL 955
            SLY+
Sbjct: 1285 SLYM 1288


>gi|302757121|ref|XP_002961984.1| hypothetical protein SELMODRAFT_403447 [Selaginella moellendorffii]
 gi|300170643|gb|EFJ37244.1| hypothetical protein SELMODRAFT_403447 [Selaginella moellendorffii]
          Length = 1310

 Score =  413 bits (1061), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/573 (39%), Positives = 342/573 (59%), Gaps = 38/573 (6%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ ++  LE+NESV V+AHTSAGKT VAEYA A++ +   R +YTSP
Sbjct: 327 DMAIQFPFELDKFQKEAIYHLEKNESVFVAAHTSAGKTVVAEYAFALSAKHCTRAVYTSP 386

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+  ++F DVGL+TGDV++ P ASCL+MTTEILR MLY+G+++++++ WV+
Sbjct: 387 IKTISNQKYRDFSEKF-DVGLLTGDVSIRPEASCLIMTTEILRSMLYKGADLVRDIEWVV 445

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + +V LSAT+ N  +FA+W+    ++  +V  T 
Sbjct: 446 FDEVHYVNDAERGVVWEEVIIMLPQHVNLVLLSATVPNIREFADWVGRTKQKKIYVTGTT 505

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQF-----REDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PL+H +F    SG    +   E F     +      L  T +K+      + G+ +
Sbjct: 506 KRPVPLEHCLF---YSGELHRICANETFLSLGVKAAKDAHLAKTTVKKGPVAPTQGGRGN 562

Query: 303 --------------------GRMAKGGSG-SGGSDIFKIVKMIMERKFQPVIVFSFSRRE 341
                                + ++GG   S  S  + ++ ++ ++   PV+VF FS+  
Sbjct: 563 VQGRGGPGGRGGRGNKVIPEEKNSRGGPWRSETSQWYGLINVLSKKNLLPVVVFCFSKSR 622

Query: 342 CEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
           C+Q A S++  D  T  EK  +      A   L   DR LP +  +  LLKRGI VHH+G
Sbjct: 623 CDQSADSLTGSDLTTSTEKGVIRVFCNKAFSRLKGTDRQLPQVLRIEELLKRGIGVHHAG 682

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           LLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TV F   +K DG S R +  GEY 
Sbjct: 683 LLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVAFHGFRKHDGKSFRQLYPGEYT 742

Query: 462 QMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           QM+GRAGRRG D  G  I+M  D+  +   L+ ++ GK   L S FRL+Y  ILNL+ R 
Sbjct: 743 QMAGRAGRRGLDTVGTVIVMCWDDIPDEGDLRRLLTGKATKLESQFRLTYTMILNLL-RV 801

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS-----GEAEVAEYHKLK 575
           E +   E ++K SF +F  ++ALP+  +++ + E E + + A+     G+  + +Y+KL 
Sbjct: 802 E-ELKVEDMLKRSFAEFHAQRALPEQQQQLLRQEGELSKMAATIECILGDPTIEDYYKLA 860

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            +   L + +  ++         L  GR++ V+
Sbjct: 861 SEADMLGESIQEKVMNSRAAQQALIPGRIVTVK 893



 Score =  155 bits (392), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 161/291 (55%), Gaps = 6/291 (2%)

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ---IEELEHKLFAHPLNK 724
            A  ++L A+ ELE  +P   P L+PVKD+K+ D + V+   +   I EL  +   H   K
Sbjct: 1019 AISAVLQALTELERLYPADPPPLDPVKDLKLNDIDAVEKYKKKQAITELMAQNKCHRCPK 1078

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             Q+   I   + +  +   + +LK  + D+ +Q+   E + R  VL+ +G ID++ +VQL
Sbjct: 1079 LQEHYSI--IKSRQLLRDRVDKLKFDVSDNALQQM-PEFQRRMDVLQDVGCIDSELIVQL 1135

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR  C  +TGDEL+  E +F+    DLD  +  AL S  +   + + +  L  +LA   
Sbjct: 1136 KGRVTCEFNTGDELIAAECLFDNQLADLDSAESIALLSSLVFQQRETSEPVLTEKLAAAK 1195

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
             +L  +A ++ ++Q    L  + ++Y    +   LM+V+Y W+KG  F+ + +MTD+ EG
Sbjct: 1196 TRLYNTALQLGDLQVSHGLVSHAEDYARDALHFGLMEVVYEWAKGTPFSTICEMTDVSEG 1255

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             ++R+  RLDE   +++ AA+ +G+  L  K   AS  ++R I+F+ SLY+
Sbjct: 1256 LVVRTIVRLDETCREIKNAARIMGDTTLFNKMDEASNLIKRDIVFAASLYV 1306


>gi|302775370|ref|XP_002971102.1| hypothetical protein SELMODRAFT_441420 [Selaginella moellendorffii]
 gi|300161084|gb|EFJ27700.1| hypothetical protein SELMODRAFT_441420 [Selaginella moellendorffii]
          Length = 1311

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 228/573 (39%), Positives = 342/573 (59%), Gaps = 38/573 (6%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ ++  LE+NESV V+AHTSAGKT VAEYA A++ +   R +YTSP
Sbjct: 328 DMAIQFPFELDKFQKEAIYHLEKNESVFVAAHTSAGKTVVAEYAFALSAKHCTRAVYTSP 387

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+  ++F DVGL+TGDV++ P ASCL+MTTEILR MLY+G+++++++ WV+
Sbjct: 388 IKTISNQKYRDFSEKF-DVGLLTGDVSIRPEASCLIMTTEILRSMLYKGADLVRDIEWVV 446

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + +V LSAT+ N  +FA+W+    ++  +V  T 
Sbjct: 447 FDEVHYVNDAERGVVWEEVIIMLPQHVNLVLLSATVPNIREFADWVGRTKQKKIYVTGTT 506

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQF-----REDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PL+H +F    SG    +   E F     +      L  T +K+      + G+ +
Sbjct: 507 KRPVPLEHCLF---YSGELHRICANETFLPLGVKAAKDAHLAKTAVKKGPVAPTQGGRGN 563

Query: 303 --------------------GRMAKGGSG-SGGSDIFKIVKMIMERKFQPVIVFSFSRRE 341
                                + ++GG   S  S  + ++ ++ ++   PV+VF FS+  
Sbjct: 564 VQGRGGPGGRGGRGNKVIPEEKNSRGGPWRSETSQWYGLINVLSKKNLLPVVVFCFSKSR 623

Query: 342 CEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
           C+Q A S++  D  T  EK  +      A   L   DR LP +  +  LLKRGI VHH+G
Sbjct: 624 CDQSADSLTGSDLTTSTEKGVIRVFCNKAFSRLKGTDRQLPQVLRIEELLKRGIGVHHAG 683

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           LLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TV F   +K DG S R +  GEY 
Sbjct: 684 LLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVAFHGFRKHDGKSFRQLYPGEYT 743

Query: 462 QMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           QM+GRAGRRG D  G  I+M  D+  +   L+ ++ GK   L S FRL+Y  ILNL+ R 
Sbjct: 744 QMAGRAGRRGLDTVGTVIVMCWDDIPDEGDLRRLLTGKATKLESQFRLTYTMILNLL-RV 802

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS-----GEAEVAEYHKLK 575
           E +   E ++K SF +F  ++ALP+  +++ + E E + + A+     G+  + +Y+KL 
Sbjct: 803 E-ELKVEDMLKRSFAEFHAQRALPEQQQQLLRQEGELSKMAATIECILGDPTIEDYYKLA 861

Query: 576 LDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR 608
            +   L + +  ++         L  GR++ V+
Sbjct: 862 SEADMLGESIQEKVMNSRAAQQALIPGRIVTVK 894



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/291 (31%), Positives = 161/291 (55%), Gaps = 6/291 (2%)

Query: 668  ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ---IEELEHKLFAHPLNK 724
            A  ++L A+ ELE  +P   P L+PVKD+K+ D + V+   +   I EL  +   H   K
Sbjct: 1020 AISAVLQALTELERLYPADPPPLDPVKDLKLNDIDAVEKYKKKQAITELMAQNKCHRCPK 1079

Query: 725  SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
             Q+   I   + +  +   + +LK  + D+ +Q+   E + R  VL+ +G ID++ +VQL
Sbjct: 1080 LQEHYSI--IKNRQLLRDRVDKLKFDVSDNALQQM-PEFQRRMDVLQDVGCIDSELIVQL 1136

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
            KGR  C  +TGDEL+  E +F+    DL+  +  AL S  +   + + +  L  +LA   
Sbjct: 1137 KGRVTCEFNTGDELIAAECLFDNQLADLNAAESIALLSSLVFQQRETSEPVLTEKLAAAK 1196

Query: 845  QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
             +L  +A ++ ++Q    L  + ++Y    +   LM+V+Y W+KG  F+ + +MTD+ EG
Sbjct: 1197 TRLYNTALQLGDLQVSHGLVSHAEDYARDALHFGLMEVVYEWAKGTPFSTICEMTDVSEG 1256

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             ++R+  RLDE   +++ AA+ +G+  L  K   AS  ++R I+F+ SLY+
Sbjct: 1257 LVVRTIVRLDETCREIKNAARIMGDTTLFNKMDEASNLIKRDIVFAASLYV 1307


>gi|313219204|emb|CBY16397.1| unnamed protein product [Oikopleura dioica]
          Length = 605

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/553 (40%), Positives = 337/553 (60%), Gaps = 48/553 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E A  + FELD FQ+ +V CLE++ESV V+AHTSAGKT VAEYAIA++ +   RVIYTSP
Sbjct: 21  EPAYKWPFELDYFQKRAVLCLEKHESVFVAAHTSAGKTVVAEYAIALSAKHMTRVIYTSP 80

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F+DVGL+TGD  + P A CL+MTTEILR MLY GS+V++++ WVI
Sbjct: 81  IKALSNQKFRDFRATFQDVGLLTGDCQIKPEAGCLIMTTEILRSMLYAGSDVIRDLEWVI 140

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  QFA W+  +  +  +V  T 
Sbjct: 141 FDEVHYINDAERGVVWEEVLIMLPAHVGLILLSATVPNIEQFASWVGRIKNRKIYVTSTL 200

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PL+HY+F  G S      LY +VD+ ++F    +                      
Sbjct: 201 KRPVPLEHYLF-TGNSTKTSDQLYKIVDQTKRFLPTGY---------------------- 237

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
            ++A+  S         ++  + +R   P + F+ SR+ C+++A  +S ++  +  EK+ 
Sbjct: 238 -KLAREAS---------VIDCLKKRDGLPAVAFTLSRKRCDKNAAMLSGVNLTSPGEKNE 287

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +   ++     L   DR LP +  +  LL+RGIAVHHSG+LP++KE +ELLF  GLVK L
Sbjct: 288 IALFYRRCTSKLKPIDRKLPQVVHLEGLLERGIAVHHSGVLPILKETIELLFARGLVKLL 347

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPA++V+F + +K DG   R +   EYIQM+GRAGRRG D  G  I++ 
Sbjct: 348 FATETFAMGVNMPARSVLFDSNRKHDGRGMRDLIPSEYIQMAGRAGRRGLDSFGTVILVQ 407

Query: 483 DEQ--MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
            +Q   +   L +M+LGK APL+S FRL+Y  +L+++    G    E ++  SF +F   
Sbjct: 408 RQQKCADQQDLINMMLGKAAPLISKFRLTYGMLLSILR--VGSLRVEDLMLRSFVEFG-R 464

Query: 541 KALPDIGKKVSKLEEEAASL-DASGEAEVAE---YHKLKLDIAQLEKKLMSEITRPERVL 596
           +  P+  K++  ++ + A+  D   + E  E   Y +   ++ +  + +M+E+     V 
Sbjct: 465 RGQPNQIKELEAIKSKRANFKDLETKIEGTEFENYLRTAKEMIKARRDVMTEVFNQGNV- 523

Query: 597 YYLGSGRLIKVRE 609
             + +GRL+ V+E
Sbjct: 524 KAMSAGRLVLVQE 536


>gi|412988295|emb|CCO17631.1| predicted protein [Bathycoccus prasinos]
          Length = 1503

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 248/665 (37%), Positives = 372/665 (55%), Gaps = 65/665 (9%)

Query: 24   EEESTKKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRV 83
            +++ST     L +    E+     +A+T        F         AKT+ FELD FQ+ 
Sbjct: 371  DQQSTSVATQLAKDVKEEMKKIEKWAITTPIPDVDAFYRSTVGNSPAKTFPFELDAFQKE 430

Query: 84   SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
            ++A +ER+E V V+AHTSAGKT VAEYA A+A +   R IYTSP+K +SNQK+R+     
Sbjct: 431  AIARIERDECVFVAAHTSAGKTVVAEYAFALAQKRCARAIYTSPIKTISNQKFRDFTDAG 490

Query: 144  KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVW 203
             DVGL+TGDV++ P +SCL+MTTEILR MLYRG++++K+V WV+FDE+HY+ DRERGVVW
Sbjct: 491  FDVGLLTGDVSVKPESSCLIMTTEILRSMLYRGADIIKDVEWVVFDEVHYVNDRERGVVW 550

Query: 204  EESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS 263
            EE II LP  + +V LSAT+ N  +FA W+    ++   +  T  RP PL+H ++  GG 
Sbjct: 551  EEVIIMLPKHVGIVMLSATVPNVREFAGWVGKTKRKKVFITGTKKRPVPLEHELY-FGGD 609

Query: 264  GL---YLVVDEKEQF-------------REDNFVK---LQDTFL---------------- 288
                 + +V EKEQF             R+D  VK   L+D  L                
Sbjct: 610  DPDKDFHLVGEKEQFLPLGYQKALKAKERKDMGVKAALLKDQGLNKQEVKKPNAGRGGGS 669

Query: 289  --------KQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
                    +Q+ G  +++ K +G      + +G +   ++++ + ++ F P++VF+FS+R
Sbjct: 670  GAGSRNRTQQREGFVKQSVKTTGSGQSTKTNTGKNQWVELIRTLEKKLFLPMVVFAFSKR 729

Query: 341  ECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
            +C+  A  ++ +D  T +EK       + A+  L+  DR LP +  +  LL RG+ VHH+
Sbjct: 730  KCDLLADGITGVDLTTSKEKHETHIFCEKALSRLSPADRTLPQVTRVRELLSRGLGVHHA 789

Query: 401  GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
            GLLP++KE+VE+LF  G VK LF+TETFAMG+N PA+ V F +++K DG   R++  GEY
Sbjct: 790  GLLPIVKEIVEMLFCRGNVKVLFSTETFAMGVNAPARCVCFESLRKHDGQEFRFLLPGEY 849

Query: 461  IQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
             QM+GRAGRRGKD  G  I+   D     NTL+ +++G    L S FRL++  ILN+ +R
Sbjct: 850  TQMAGRAGRRGKDTVGTVILSCWDNFPTENTLRKLLVGTATKLESQFRLTFAMILNV-AR 908

Query: 520  AEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD-----ASGEAEVAEYHKL 574
            AE     E V+  SF +F  +K    +G + S+L     SL       S EA    ++  
Sbjct: 909  AE-DLKVEDVLARSFAEFHAQKT---VGNRESRLRHAIISLTRARDLISTEASRDPFNWT 964

Query: 575  KLDIAQLEKKLMSE--------ITRPERVLYYLGS-GRLIKVREGGTDWG-WGVVVNVVK 624
            +  +     KL+ E        I +       LGS GR++ V++    +  + V + V+K
Sbjct: 965  RAVVCSRAAKLLKELGERANEAIVKSRGFREALGSPGRVVLVKDDKGGFARFAVALRVIK 1024

Query: 625  KPSAG 629
            +   G
Sbjct: 1025 EEKDG 1029



 Score =  120 bits (301), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 146/276 (52%), Gaps = 10/276 (3%)

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVN----H 742
            L  L+P KD+KI + +  +   +  E   +L + P +   D  ++  + R  +      H
Sbjct: 1229 LQTLDPTKDLKITNVDDAEACRRHAEALAQLPSMPTD--VDSKRLSQWSRLLDCERHLLH 1286

Query: 743  EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
            +I QLK  + D+ +     + + ++RVLK +G++D    V LKGR AC + TGDEL+  E
Sbjct: 1287 QIDQLKFGLSDANLA-LTPDFETKTRVLKYMGYLDEARAVTLKGRVACELSTGDELIGAE 1345

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN---LRMELAKPLQQLQESARKIAEIQN 859
            ++F G    L   + AAL S  +  +K++   +   L + L   +      A +  +IQ 
Sbjct: 1346 IVFGGCLEKLTPAEAAALLSALVFQEKNASAPDYDALPVNLKDSIALANTLAIRAGDIQR 1405

Query: 860  ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
            +  L V  DEY    ++  L +V+Y W+    F+E+ Q+TD+ EG+I+R+  RL+E    
Sbjct: 1406 DFGLSVIGDEYCAENLKFGLSEVVYRWAMMDPFSEICQLTDVPEGTIVRTITRLNETCRD 1465

Query: 920  LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            ++  A+ +G+ +L +K   A   +RR I+FS SLY+
Sbjct: 1466 VKNVARIIGDASLSQKMEDAMALIRRDIVFSASLYV 1501


>gi|402590817|gb|EJW84747.1| hypothetical protein WUBG_04342, partial [Wuchereria bancrofti]
          Length = 743

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 204/430 (47%), Positives = 280/430 (65%), Gaps = 15/430 (3%)

Query: 64  VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVI 123
           V    MA+ Y FELDPFQ+ +V CL+R +SV V+AHTSAGKT VAEYA+A+    K R I
Sbjct: 300 VLKSNMARKYPFELDPFQQQAVICLDRGDSVFVAAHTSAGKTVVAEYAVALCNLHKTRAI 359

Query: 124 YTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEV 183
           YTSP+KALSNQK+RE    F+DVGL+TGD+ L P A CL+MTTE+LR MLY GSEV++E+
Sbjct: 360 YTSPIKALSNQKFREFKLIFQDVGLITGDIQLHPEAFCLIMTTEVLRSMLYNGSEVIREL 419

Query: 184 AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHV 243
            WVIFDE+HY+ D ERG VWEE +I LP   K+V LSAT+ N  +FA+W+  + K+  +V
Sbjct: 420 EWVIFDEVHYINDAERGHVWEEVLIMLPAHAKIVMLSATVPNCVEFADWVGRIKKKRIYV 479

Query: 244 VYTDFRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNF--VKLQDTFLKQKIG--- 293
           + T  RP PL+H+++  G  G     ++ ++D   QF +  +         +++ I    
Sbjct: 480 ITTARRPVPLEHFLY-TGQDGKTKKDMFKIIDSSGQFVQKGYSLASAAKATIRKAIANVG 538

Query: 294 --GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK 351
             G R N K    +    S    +    ++  +  +   PVIVF FSRR C+ +A  +  
Sbjct: 539 PVGYRPNNKILSYLK--NSYDDKNVYITVIDHLRMQNMLPVIVFVFSRRRCDDNAYLLRS 596

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           +D  T++EK ++   F   +  L   D+NLP +  M  L K G A+HHSG+LP++KE+VE
Sbjct: 597 VDLTTEKEKSSIHHFFLRCIARLRGSDKNLPQVLQMKELCKHGFAIHHSGILPILKEVVE 656

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
           LLFQ+GLVK LFATETFAMG+NMPA+TV+F +++K DG   R +  GEYIQM+GRAGRRG
Sbjct: 657 LLFQKGLVKVLFATETFAMGVNMPARTVIFDSLQKHDGRQLRLLNPGEYIQMAGRAGRRG 716

Query: 472 KDDRGICIIM 481
            D  G  I++
Sbjct: 717 LDATGSVIVL 726


>gi|452977114|gb|EME76887.1| hypothetical protein MYCFIDRAFT_43865 [Pseudocercospora fijiensis
           CIRAD86]
          Length = 1288

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 241/624 (38%), Positives = 340/624 (54%), Gaps = 84/624 (13%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 302 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 361

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+   EF DVG++TGDV + P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 362 IKALSNQKFRDFRSEFDDVGILTGDVQIRPEASCLIMTTEILRSMLYRGADLIRDVEFVI 421

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 422 FDEVHYVNDLERGVVWEEVIIMLPEHVTLICLSATVPNTYEFASWVGRTKKKDIYVISTP 481

Query: 248 FRPTPLQHYVFPVGGS-GLYLVVDEKEQFREDNFVKLQDTFL--------KQKIGGRREN 298
            RP PL+HY++       ++ +VD  + F E  +    D           +QK   + E 
Sbjct: 482 KRPVPLEHYLWADNSDKKMFKIVDANKSFIEKGWKDANDALTGRDKIIAAEQKAKEKEEA 541

Query: 299 GKAS------------------------------GRMAKGGSGSGG-------------- 314
             A+                              GR      G G               
Sbjct: 542 AVAAGRGGRGGRGGPAGRGGQRGGGNQRGGPQQRGRGQPATRGQGNIARTGRGGGRTTAA 601

Query: 315 ---SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV 371
              +    +V+ + + +  P  +F FS++ CE+ A ++S LD+ T  EK  +  + + ++
Sbjct: 602 QDRNTWVHLVQHLKKEELLPCCIFIFSKKRCEESADALSNLDYCTAAEKSAIHMILEKSL 661

Query: 372 DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
             L  +DR LP I  +  LL RGIAVHH GLLP++KE VE+LF   LVK LFATETFAMG
Sbjct: 662 ARLKSDDRQLPQIRRIRDLLSRGIAVHHGGLLPIVKECVEILFARTLVKVLFATETFAMG 721

Query: 432 LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV---DEQMEM 488
           LN+P +TVVF+  +K+D    R +  GEY QM+GRAGRRG D  G  II+    DE    
Sbjct: 722 LNLPTRTVVFSGFRKYDNKQFRDLLPGEYTQMAGRAGRRGLDTVGYVIIVTPGADEAPPA 781

Query: 489 NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             L+ M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +  LP+  K
Sbjct: 782 ARLRQMMLGDPTKLRSQFRLTYNMILNLL-RVEA-LKIEEMIKRSFSENATQALLPEHEK 839

Query: 549 KVSKLEEEAASLDAS-------GEAEVAEYHKLKLDIAQLEKKLM---------SEITRP 592
           ++   E   A LD          + +V   H   +D  +L + L            + +P
Sbjct: 840 QIKVSE---ADLDKVVREQCDICDKDVETCHDASIDFQRLTEALHLSMLSTPVGRRMFQP 896

Query: 593 ERVLYYLGSGRL----IKVREGGT 612
            RV+ + G        + +REG +
Sbjct: 897 RRVIVFKGRNDARTAGVLLREGAS 920



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 121/218 (55%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +  +I  ++  M D  +Q   D    R  VLKKLG ID    V+LKG+ AC I + DEL+
Sbjct: 1072 IKDKIDSIRQLMSDQNLQLLPD-YNQRIDVLKKLGFIDEQSRVELKGKVACEIHSADELV 1130

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+      D +  ++ AL SCF+  +K+    NL   L K ++ + + +  +  +Q 
Sbjct: 1131 LTELVLENVLADYEPEEIVALLSCFVFQEKTDNTPNLTPALEKGIETIVKISETVNAVQT 1190

Query: 860  ECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++ ++ D+  +   RP   L++V++ W++G  F+ +  +TD+ EG+I+R   RLDE  
Sbjct: 1191 YYQVILSSDDSNDFVSRPRFGLVEVVHEWARGMPFSRITDLTDVLEGTIVRVITRLDETC 1250

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +++ AA+ +G+  L  K  A  E ++R I  + SLYL
Sbjct: 1251 REVKNAARIIGDPTLFTKMQACQELIKRDICATASLYL 1288


>gi|307177450|gb|EFN66577.1| Helicase SKI2W [Camponotus floridanus]
          Length = 1136

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 225/586 (38%), Positives = 345/586 (58%), Gaps = 52/586 (8%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  + +ELD FQ+ ++  LE+N +V V+AHTSAGKT VAEYAIA++ +   RVIYTSP+K
Sbjct: 200 AIKFEYELDTFQKQAILKLEQNSNVFVAAHTSAGKTTVAEYAIALSQKHMTRVIYTSPIK 259

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQKYRE  ++F+ VGL+TGD+ ++  ASCL+MTTEIL+ MLY  S+VL+++ +VIFD
Sbjct: 260 ALSNQKYREFKRKFESVGLLTGDLQINQTASCLIMTTEILQSMLYCASDVLRDLEFVIFD 319

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ + +RG VWEE +I LP  I +V LSAT+ N   FA+W+  + K+  +V+ T  R
Sbjct: 320 EVHYINNEDRGHVWEEIVILLPQTINIVMLSATVPNPIIFADWVGRIKKRKMYVISTLKR 379

Query: 250 PTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVK-------------------LQD 285
           P PL HY++  G  G      +LV+D   QF  D + K                   +Q 
Sbjct: 380 PIPLLHYLY-TGTDGKTKDDKFLVLDGNNQFLLDGWYKATNASDKKKNKNAKDPRRRIQM 438

Query: 286 TFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQH 345
           TF ++++  R                         +  + +    PV+VF+ SR+ C+ +
Sbjct: 439 TFKQEEVLWR-----------------------AFISHLQKNDMLPVVVFTLSRKRCDMN 475

Query: 346 AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
           A ++  LD  T  EK  V   FQ+ +  L   DR LP + +M  LL++G+ +HHSG+LP+
Sbjct: 476 AATLRNLDLTTAREKHQVHAFFQSNIKHLKGSDRELPQVLMMQELLEKGVGIHHSGILPI 535

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           ++E+VE+LFQ GLVK LFATETFAMG+NMPA+TVVF +++K+DG++ R +   EYIQM+G
Sbjct: 536 LREIVEMLFQSGLVKLLFATETFAMGVNMPARTVVFDSIRKFDGNTFRILYPTEYIQMAG 595

Query: 466 RAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
           RAGRRG D  G  I+M    +   N LK M+ G+P  L S F+++Y  +LNL  R     
Sbjct: 596 RAGRRGHDTTGTVIVMCRYDIPHFNDLKPMMCGEPQTLESKFKVTYSMLLNL-RRVNESV 654

Query: 525 TAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE--VAEYHKLKLDIAQLE 582
           T E +++ SF +            ++ K+E E ++L    E +  ++ ++++ +D  +  
Sbjct: 655 TVEAMMRKSFKESPLASQEATYNSELRKVERELSNLPTLTEIQKKLSMFYQVAVDYLEDV 714

Query: 583 KKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA 628
           K L   +   ++    +  GR++ +         G+++ VV   S+
Sbjct: 715 KFLNPYLFESKKSAKAMTEGRVLLISYANHYNKLGLLLQVVHHKSS 760



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 127/230 (55%), Gaps = 14/230 (6%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
            E Q R    + ++  + +QL+ K+ D  +  + D L N   +LK+L +ID+D  V LKGR
Sbjct: 915  EEQFRPVFERNQLEDKKRQLQLKLSDEGMALYPDYL-NMVALLKQLKYIDSDERVALKGR 973

Query: 788  AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
             A  + + +ELL+TEL+       L   ++ AL S  I   ++  +  L   LA   + +
Sbjct: 974  VALQMGS-NELLITELVLKNVLTVLQPAEIVALLSALIFQQRTDSEPTLTPSLANGCEIM 1032

Query: 848  QESARKIAEIQNECKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEG 904
             +   ++  ++ + +L         ST+ P    L++V+Y W++  +FAE+++MTD+ EG
Sbjct: 1033 NKVHAELERLEQQYQL---------STIPPLNFGLVEVVYEWAQAKSFAEIMKMTDVQEG 1083

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
             I+R  ++L E L  ++ AA  +G+  L++K   AS +++R I+F+ SLY
Sbjct: 1084 IIVRCIQQLGETLRDVKNAAVTIGDPILKEKMEEASTAIKRDIVFAASLY 1133


>gi|359478571|ref|XP_002279903.2| PREDICTED: helicase SKI2W-like [Vitis vinifera]
          Length = 1379

 Score =  411 bits (1056), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 232/587 (39%), Positives = 338/587 (57%), Gaps = 57/587 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 372 DMALDFPFELDTFQKEAIYYLEKGDSVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAP 431

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+   +F DVGL+TGDV+L P ASCL+MTTEILR MLY+G+++++++ WVI
Sbjct: 432 IKTISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYKGADIIRDIEWVI 490

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++   V  T 
Sbjct: 491 FDEVHYVNDVERGVVWEEVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKQIRVTGTT 550

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--------------- 292
            RP PL+H +F  G   LY +  E E F        +D   K+ +               
Sbjct: 551 KRPVPLEHCIFYSG--ELYKIC-ESETFLPQGLKTAKDVHKKKNLSTGGGGSGTYSGPPS 607

Query: 293 -------GGRREN------GKASGRMAKG---GSGSGGSD-----------------IFK 319
                    RREN       K SG    G   G+G G  +                    
Sbjct: 608 AAHDGARAQRRENPGRGKQNKYSGSQKVGNFYGTGGGNQNSSGSQSNWGSRRSEASLWLL 667

Query: 320 IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
           ++  + ++   PV++F FS+  C+  A  M+ +D  +  EK  +    + A   L   DR
Sbjct: 668 LINKLSKKSLLPVVIFCFSKNRCDISADKMTGIDLTSSSEKHEIHVFCERAFSRLKGSDR 727

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
           NLP +  +  LL+RGI VHH+GLLP++KE+VE+LF  G+VK LF+TETFAMG+N PA+TV
Sbjct: 728 NLPQVIRVQSLLRRGIGVHHAGLLPIVKEVVEMLFCRGVVKVLFSTETFAMGVNAPARTV 787

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGK 498
           VF +++K+DG   R +  GEY QM+GRAGRRG D  G  ++M  DE  +   LK +++G 
Sbjct: 788 VFDSLRKFDGREFRQLLPGEYTQMAGRAGRRGLDKIGTVVVMCRDEIPDERDLKHVIVGS 847

Query: 499 PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV-SKLEEEA 557
              L S FRL+Y  IL+L+ R E +   E ++K SF +F  +K LP+  + +  KL +  
Sbjct: 848 ATRLASQFRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKLAQPT 905

Query: 558 ASLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGR 603
            +++   GE  + EY+ +  +  Q   +++  + +      +L  GR
Sbjct: 906 KTIECIKGEPTIEEYYDMYTEAEQHSNQILETVMQSSAAQQFLTLGR 952



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 171/279 (61%), Gaps = 2/279 (0%)

Query: 678  ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQR 736
            EL+S+  +  P L+P+KD+K++D  +V+   +   L  K+  +  ++  + E  I+  + 
Sbjct: 1099 ELKSKGHKYPPALDPLKDLKLKDMTLVETYYKWNSLLQKMADNKCHECVKLEEHIKLAKE 1158

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
                  E+  L+ +M D  +Q+  D  + R  VL+++G IDAD VVQ+KGR AC +++G+
Sbjct: 1159 LKRHKEEVNALRFQMSDEALQQMPD-FQGRIDVLQEIGCIDADLVVQIKGRVACEMNSGE 1217

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            EL+ TE +F    +DL+  +  AL S  +   K++ + +L  +L++  Q+L  +A ++ E
Sbjct: 1218 ELICTECLFENQLDDLEPEEAVALMSALVFQQKNTSEPSLTPKLSQAKQRLYNTAIRLGE 1277

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            +Q + KL+++ +EY +  ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+  RLDE 
Sbjct: 1278 LQAQFKLQISPEEYAQDNLKFGLVEVVYEWAKGTPFADICELTDVPEGLIVRTIVRLDET 1337

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              + R AA  +G   L KK  AAS +++R I+F+ SLY+
Sbjct: 1338 CREFRNAAAIMGNSALHKKMEAASNAIKRDIVFAASLYI 1376


>gi|449455162|ref|XP_004145322.1| PREDICTED: helicase SKI2W-like [Cucumis sativus]
          Length = 1352

 Score =  410 bits (1055), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 349/604 (57%), Gaps = 57/604 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ ++  LE+ +SV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 353 DMALDFPFELDTFQKEAIYHLEKGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 412

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+   +F DVGL+TGDV+L P ASCL+MTTEILR MLYRG+++++++ WVI
Sbjct: 413 IKTISNQKYRDFCGKF-DVGLLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVI 471

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++  HV  T 
Sbjct: 472 FDEVHYVNDIERGVVWEEVIIMLPRHINIVLLSATVPNTIEFADWIGRTKQKRIHVTGTA 531

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQF-------------------------------- 275
            RP PL+H +F  G   LY +  E E F                                
Sbjct: 532 KRPVPLEHCIFYSG--ELYKIC-ESEIFLSHGLKAAKDASKKKNSSVVGGAGGSHAGASV 588

Query: 276 ----REDNFVKLQDTFLKQKIGGRRENGKASGRM---AKGGSG--------SGGSDIFKI 320
                ++  V+  +   + K  G +  G  SG      K G G        S  S    +
Sbjct: 589 ANDGTKNRKVESFNRSKQNKHSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSDASLWLLL 648

Query: 321 VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN 380
           +  + ++   PV++F FS+  C++ A ++  +D  +  EK  +      A   L   DR+
Sbjct: 649 INRLSKKSLLPVVIFCFSKNRCDKSADNIYSIDLTSSSEKSEIRVFCDKAFSRLKGSDRS 708

Query: 381 LPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVV 440
           LP I  +  LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVV
Sbjct: 709 LPQIVRVQGLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVV 768

Query: 441 FTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKP 499
           F  ++K+DG   R +  GEY QM+GRAGRRG D  G  I+M  E++ E   LK +++G  
Sbjct: 769 FDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVIVMCREEIPEEKDLKRVIVGTA 828

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV-SKLEEEAA 558
             L S FRL+Y  IL+L+ R E +   E ++K SF +F  +K LP+  + +  KL +   
Sbjct: 829 TKLESQFRLTYIMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKQQLLMRKLAQPTR 886

Query: 559 SLDA-SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVR-EGGTDWGW 616
           +++   GEA + EY+ L  +  +   +L   + +   +  +L  GR++ V+ +   D   
Sbjct: 887 TIECIKGEATIEEYYDLYAEAEKPSNQLSEAVMQSSAIQQFLVPGRVVIVKSQSAKDHLL 946

Query: 617 GVVV 620
           GV+V
Sbjct: 947 GVIV 950



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 170/280 (60%), Gaps = 11/280 (3%)

Query: 680  ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKA 738
            + ++P   P L+P+KD+K++D  +V+    + ++  K+ A   NK     ++    +  A
Sbjct: 1077 DGKYP---PALDPLKDLKLKDVNLVEAYKNLTDISLKMIA---NKCHGCIKLGEHLKLAA 1130

Query: 739  EVN---HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
            E+     E+  LK +M D  +Q+  D  + R  VLK++G I++D VVQ+KGR AC +++G
Sbjct: 1131 EIKKHKEEVNNLKFQMSDEALQQMPD-FQGRIDVLKEIGCINSDLVVQMKGRVACEMNSG 1189

Query: 796  DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +EL+ TE +F    ++L+  +  AL S F+   K++ + +L  +L+   ++L E+A ++ 
Sbjct: 1190 EELICTECLFENQLDNLEPEEAVALMSAFVFQQKNTSEPSLTPKLSMAKKRLYETAIRLG 1249

Query: 856  EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            ++Q + +L+++ +EY    ++  L++V+Y W+KG  FA++ ++TD+ EG I+R+  RLDE
Sbjct: 1250 QLQAQFRLQIDPEEYARDNLKFGLVEVVYEWAKGTPFADICELTDVPEGMIVRTIVRLDE 1309

Query: 916  FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
               + + AA  +G   L KK   AS +++R I+F+ SLY+
Sbjct: 1310 TCREFKNAAAIMGNSALHKKMETASNAIKRDIVFAASLYI 1349


>gi|403416970|emb|CCM03670.1| predicted protein [Fibroporia radiculosa]
          Length = 1137

 Score =  410 bits (1053), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 234/607 (38%), Positives = 344/607 (56%), Gaps = 89/607 (14%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           +  +Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+
Sbjct: 217 LPTSYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAGKHMTRAIYTSPI 276

Query: 129 KALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKYR+  Q F    VG++TGDV ++P A+CL+MTTEILR MLY+G++++++V +V
Sbjct: 277 KALSNQKYRDFKQTFSTSSVGILTGDVQINPEANCLIMTTEILRSMLYKGADLIRDVEFV 336

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ T
Sbjct: 337 IFDEVHYVNDAERGVVWEEVIIMLPDHVNIILLSATVPNTKEFADWVGRTKKKDIYVIST 396

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QKI 292
             RP PL+HY++   G  L+ VVD    F    +    +   +              Q++
Sbjct: 397 AKRPVPLEHYLY--AGRDLHKVVDANRSFLTQGYKDAAEALRRKQDKEREAAGLPPVQRL 454

Query: 293 GGRR------ENGKASGRMAKGGSGS--------GGSD----------IFKIVKMIMERK 328
           G R       + G  +GR  + GS          GGS              ++  + ++ 
Sbjct: 455 GARAAAPQRGQRGGPAGRGGQRGSAPARGAPVARGGSARTFHQPDKNLYVHLLGNLRKKS 514

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             PV+VF+ S++ CE++A +++  D  T  EK                            
Sbjct: 515 LLPVVVFTLSKKRCEENASTLTNADLCTSVEK---------------------------- 546

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
                   +HH GLLP++KE+VE+LF  GLVK LFATETFAMG+NMPAK VVF+ ++K D
Sbjct: 547 -------RIHHGGLLPIVKEVVEILFARGLVKVLFATETFAMGVNMPAKCVVFSGIRKHD 599

Query: 449 GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFR 507
           G S R I +GEY QM+GRAGRRG D  G  +I+ ++ + E   L++M+LG P+ L S FR
Sbjct: 600 GRSFRDILAGEYTQMAGRAGRRGLDSTGTVVIVANDDVPEQGALQNMILGTPSKLQSQFR 659

Query: 508 LSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA----S 563
           L+Y  ILNL+ R E     E +IK SF + + +K LPD  KKV + E+  ++L       
Sbjct: 660 LTYNMILNLL-RVEA-LRVEEMIKRSFSENRSQKLLPDQQKKVVESEKTLSTLPKLECDI 717

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV 623
              ++  ++ +  +I  + ++L+       +    L +GR++ +R+G   W   V++   
Sbjct: 718 CSPDINHFYDVSYEIVDINQQLLGMAAGHSQGSKLLSAGRVVVLRDGHFRWNLAVMLK-- 775

Query: 624 KKPSAGV 630
              SAGV
Sbjct: 776 ---SAGV 779



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 116/215 (53%), Gaps = 15/215 (6%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I +LK  + D  ++   D  + R  VLK+L  ID +  V LKGR AC I++ +EL++TEL
Sbjct: 935  IAELKRAISDQNLELIPD-YEQRIAVLKELRFIDENSTVLLKGRVACEINSANELVLTEL 993

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +   T    +  +V AL SCF+  +K+  +  +  +L +    +   A ++  IQ+  K+
Sbjct: 994  ILENTLATFEPEEVVALLSCFVFQEKTDIEPVIPPKLEEGRDAIVAIAERVGSIQDYHKV 1053

Query: 864  EVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
                      T R     LM+V+Y W+KG     + ++TD+ EG+I+R   RLDE   ++
Sbjct: 1054 P-------GETFRGLKFGLMEVVYEWAKGM----ITELTDVAEGTIVRVITRLDETCREV 1102

Query: 921  RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            R AA+ +G+  L KK   +   ++R I+F+ SLY 
Sbjct: 1103 RDAARVIGDAELFKKMEESQIKIKRDIVFAASLYF 1137


>gi|378734691|gb|EHY61150.1| adenosinetriphosphatase [Exophiala dermatitidis NIH/UT8656]
          Length = 1260

 Score =  409 bits (1052), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 227/541 (41%), Positives = 316/541 (58%), Gaps = 61/541 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA+T+ FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 280 EMARTWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 339

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+  Q F DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 340 IKALSNQKFRDFKQVFDDVGVLTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 399

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 400 FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKNIYVISTP 459

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF--LKQKIGGRRENGKASGRM 305
            RP PL+HY++   G  ++ +VD +++F +  +    D    L +    +    +ASGR 
Sbjct: 460 KRPVPLEHYLW--AGKEMFKIVDSEKRFLQSGWKAANDVLSGLDKVKEQKAVEAQASGRG 517

Query: 306 A-----------------KGGSGS----------------GGSDI--------------- 317
                             +GG+                  G  +I               
Sbjct: 518 GASQRGGRGQQARGGQNQRGGANQRGGPQQRGRGGQVPNRGQGNIARTGRGGGRTTAAQD 577

Query: 318 ----FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                 +V+ + +    P  +F FS++ CE++A S+S  DF T  EK  +    + ++  
Sbjct: 578 RNLWVHLVQHLRKENLLPACIFVFSKKRCEENAESLSNQDFCTATEKSAIHMTIEKSLAR 637

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L  EDR LP I  +  +L RG+AVHH GLLP++KE+VE+LF + LVK LFATETFAMGLN
Sbjct: 638 LKPEDRVLPQIRRLREMLGRGVAVHHGGLLPIVKEIVEILFAKTLVKVLFATETFAMGLN 697

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME---MNT 490
           +P +TVVF+  +K DG   R +  GEY QM+GRAGRRG D  G  I++   + E      
Sbjct: 698 LPTRTVVFSGYRKHDGRDFRNLLPGEYTQMAGRAGRRGLDTVGTVILVTPGRTEAPPAAE 757

Query: 491 LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
           L  M+ G    L S FRL Y  ILNLM R E     E +IK SF +   +  LP   K+V
Sbjct: 758 LIQMITGPATKLRSQFRLHYNMILNLM-RVEA-LKIEEMIKRSFSENATQALLPQHEKEV 815

Query: 551 S 551
           +
Sbjct: 816 A 816



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 121/218 (55%), Gaps = 3/218 (1%)

Query: 740  VNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            +   I+ LK  M D  +    D  + R+ VLK LG ID    VQLKG+ AC I + DEL+
Sbjct: 1044 IKENIESLKMLMSDQNLALLPD-YQQRTEVLKDLGFIDDQSRVQLKGKVACEIHSADELV 1102

Query: 800  VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            +TEL+        +  ++ AL S F+  +K+  +  L   L +  + + E + ++   Q 
Sbjct: 1103 LTELILENVLASFEPEEIVALLSSFVFQEKTDNEPQLSENLKRGKEAIIEISERVNHYQT 1162

Query: 860  ECKLEVNVDEYVESTVRPF--LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              ++ ++ D+  +   RP   L++V+Y W++G +F  +  +TD+ EG+I+R   RLDE  
Sbjct: 1163 LHQVILSSDDANDFVSRPRFGLVEVVYEWARGMSFNRITDLTDVMEGTIVRVVTRLDETC 1222

Query: 918  NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             ++ +AA+ +G+  L +K   A E +RR ++F+ SLY+
Sbjct: 1223 REVMSAARLIGDPGLYQKMEKAREMIRRDVVFTASLYM 1260


>gi|321262386|ref|XP_003195912.1| RNA helicase; Ski2p [Cryptococcus gattii WM276]
 gi|317462386|gb|ADV24125.1| RNA helicase, putative; Ski2p [Cryptococcus gattii WM276]
          Length = 1202

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 233/561 (41%), Positives = 326/561 (58%), Gaps = 70/561 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMAK Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 298 EMAKEYPFELDNFQKEAVYRLELGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 357

Query: 128 LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+    F+   VG++TGDV ++   SCL+MTTEILR MLY+G++++++V +
Sbjct: 358 IKALSNQKFRDFKTTFEPSTVGILTGDVQINAEGSCLIMTTEILRSMLYKGADLIRDVEF 417

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 418 VIFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 477

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
           T  RP PL+H+++   G   + +V  + +F  + +    D   +              Q+
Sbjct: 478 TPMRPVPLEHFLW--AGRETHKIVSSQSKFLMEGYSSASDALRRKQDKEREANGLPPLQR 535

Query: 292 IGGRR---------ENGK-------ASGRMAKGGSGSGG--------------------- 314
            GGR            GK        +GR      G  G                     
Sbjct: 536 TGGRGGAPVKSKDLPTGKNAPFTRVGAGRNHTNRGGGNGPPQAAFGGGRGGRGGSRGGFG 595

Query: 315 ----------SDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                      +I+  ++  + +    PV+ F FS++ CE++A ++S LD  T +EK  V
Sbjct: 596 GSSRPSHVLDQNIWTHLISYLKKNTLLPVVNFVFSKKRCEEYAQTLS-LDLCTAKEKSEV 654

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
              ++ A+  L  ED+NLP I  M  LL RGI VHH GLLP++KE+VE+LF  GLVK LF
Sbjct: 655 HITWERALTRLKGEDKNLPQILRMRELLGRGIGVHHGGLLPLVKEVVEILFARGLVKVLF 714

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
           ATETFAMG+NMPAK+VVF+ ++K DG S R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 715 ATETFAMGVNMPAKSVVFSGIRKHDGTSFRNLLPGEYTQMAGRAGRRGLDTTGTVIILSG 774

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE   +  L +M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K 
Sbjct: 775 DELPSVEELNEMMLGVPNRLSSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENATQKM 832

Query: 543 LPDIGKKVSKLEEEAASLDAS 563
            P+  + +++  +   SL  S
Sbjct: 833 APEQQRVIAQNSQSFPSLSHS 853



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 118/213 (55%), Gaps = 4/213 (1%)

Query: 733  CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
                + +V   IQ+LK ++ D  ++   D  ++R  VLK+L  ID +  V LKGR AC I
Sbjct: 982  TLHERKQVEQRIQKLKLQLSDQNLELLPD-YESRVEVLKRLSFIDENATVLLKGRVACEI 1040

Query: 793  DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            ++  EL++TEL+      D    +V AL S F+ V+K+  Q  +  +L   L  +   A 
Sbjct: 1041 NSAPELILTELILENILADYTPEEVVALLSIFVFVEKTESQPIIPTKLQDGLDVIYNIAE 1100

Query: 853  KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            ++   Q  C  +V  DE+  +  +P L++V+Y W++G  F E+  +TD+ EG+I+R   R
Sbjct: 1101 QVEMEQASC--QVQHDEFA-TKYKPGLVEVVYEWARGMPFNEITNLTDVPEGTIVRVITR 1157

Query: 913  LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
            LDE   ++R AA+ +G+ +L KK   A   +RR
Sbjct: 1158 LDETCREVRDAARVIGDADLFKKMEEAQSLIRR 1190


>gi|219112171|ref|XP_002177837.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410722|gb|EEC50651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 872

 Score =  407 bits (1046), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 221/549 (40%), Positives = 335/549 (61%), Gaps = 38/549 (6%)

Query: 72  TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKAL 131
           T+ F LD FQ+ +V  LER+ESV V+AHTSAGKT VAEYA+A+A +   R +YTSP+KAL
Sbjct: 2   TFPFILDGFQQQAVVRLERSESVFVAAHTSAGKTVVAEYAVALAKQRGTRCVYTSPIKAL 61

Query: 132 SNQKYRELHQEF--KDVGLMTGDVTLSPN-ASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           SNQK+R+   +F  +++GL+TGD+ ++ + ++CL+MTTEILR MLYRG+++++++ +V+F
Sbjct: 62  SNQKFRDFSLKFGAENIGLITGDLQVNADDSTCLIMTTEILRSMLYRGADLVRDIEFVVF 121

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERGVVWEE II LP  + ++FLSAT  N  +F++WI    ++P  V+ TD+
Sbjct: 122 DEVHYVNDTERGVVWEEVIIMLPSYVNLIFLSATTPNTLEFSDWIGRTKRKPVFVIKTDY 181

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL   ++   G  L+ V++ ++ F E  F    +  L                MA  
Sbjct: 182 RPVPLSFNLW--AGLKLHTVMEGRDGFLERGFASAANALLPA--------------MAWQ 225

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
             G+   +   +V+ +      P +VFSFS+++CE+ ++ +  LD NT +E+  V+    
Sbjct: 226 AQGTK-QNWMSLVRFLDRENMTPTVVFSFSKKKCEEISIMLQSLDLNTAKERGAVQGFTL 284

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
             V  L++ D NLP + ++  +++RGI +HH GLLP++KE+VE+LF + LVK LFATETF
Sbjct: 285 QTVARLSKNDSNLPQVVMVCEMVQRGIGIHHGGLLPILKEMVEILFAKSLVKILFATETF 344

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV--DEQM 486
           AMG+NMPA++VVF +V+K DG   R +  GE  QM+GRAGRRG D  G  II    +   
Sbjct: 345 AMGVNMPARSVVFNSVRKHDGKQFRQLEPGEITQMAGRAGRRGLDKVGTVIICCFGETPP 404

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD- 545
               LK M+ G    L S FRL+Y  ILNL+ R E + + E +IK SF +F  ++AL   
Sbjct: 405 PQPMLKQMLTGSSTRLNSRFRLTYNMILNLL-RVE-EMSVESMIKRSFSEFATQRALTTN 462

Query: 546 -----IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY--Y 598
                + + +  LE    S D      V EY     +I  + ++L++ +   E   +   
Sbjct: 463 DFPQLLTRGIRALENRIGSED------VEEYFSTCSEILSITERLLTNVRDTEAASFEGI 516

Query: 599 LGSGRLIKV 607
           L  GR++ +
Sbjct: 517 LQKGRIVLI 525



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 135/228 (59%), Gaps = 5/228 (2%)

Query: 728 ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
           E+     +RK  +  ++  L+  + +  +Q F D L+ R  VL+KLG+ID    V +KGR
Sbjct: 649 ESMYSTVERKESLRSKVNTLRHLLSNESLQLFPDFLQ-RKAVLRKLGYIDEKETVSIKGR 707

Query: 788 AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQL 847
            AC  +T +EL+VTEL+F G  N+LD  ++ A+ S  +  +K  E  +L +EL + L  +
Sbjct: 708 VACETNTCEELIVTELVFEGLLNELDPEEIVAVLSALVFQEKGKET-SLSVELPERLITI 766

Query: 848 QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
              A  +  IQ +  L+++  EY ES++   L+ V+Y W+ G  F  +  +TD+ EGSI+
Sbjct: 767 ---ALNLGRIQKDVGLDIDPAEYSESSLNFGLVHVVYEWALGVPFKSICDLTDVQEGSIV 823

Query: 908 RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           RS  RLDE   ++R  A+ VG   L +K  AAS +++R I+F++SLY+
Sbjct: 824 RSITRLDELCREVRNCARVVGNPTLYRKLEAASMTIKRDIVFASSLYV 871


>gi|392597771|gb|EIW87093.1| translation repressor [Coniophora puteana RWD-64-598 SS2]
          Length = 1253

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 227/553 (41%), Positives = 319/553 (57%), Gaps = 64/553 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMA  Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   R IYTSP
Sbjct: 265 EMAHKYPFELDTFQKEAVYHLEMGDSVFVAAHTSAGKTVVAEYAIALAEKHMTRAIYTSP 324

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+  Q F    VG++TGDV ++P ASCLVMTTEILR MLY+G++++++V +
Sbjct: 325 IKALSNQKFRDFKQTFSSSSVGILTGDVQINPEASCLVMTTEILRSMLYKGADLIRDVEF 384

Query: 186 VIFDEIHYMKDRE-----------------RGVVWEESIIFLPPAIKMVFLSATMSNATQ 228
           VIFDE+HY+ D E                 RGVVWEE II LP  + ++ LSAT+ N  +
Sbjct: 385 VIFDEVHYVNDAEVPPFACTLSSPFIHHLQRGVVWEEVIIMLPDHVNIILLSATVPNTKE 444

Query: 229 FAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL 288
           FA+W+    K+  +V+ T  RP PL+HY++   G   + +VD   +F    + +  +   
Sbjct: 445 FADWVGRTKKKDIYVISTAQRPVPLEHYLY--AGRDTFKIVDASRKFLSQGYKEAGEALR 502

Query: 289 KQKIGGRRENGKASGRMAKG-----------------------------GSGSGGSDIFK 319
           +++   R   G A  +                                  +G   +    
Sbjct: 503 RKQDKEREAAGLAPVQRVGARGAAARGGQRGGGPNRGGGGGRGGPPRTINTGMDKNLYVH 562

Query: 320 IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
           ++  + ++   PV+VF+ S++ CE++A +++  +     E+  V    + A+  L   D+
Sbjct: 563 LLSHLQKKALLPVVVFTLSKKRCEENASTLTNANLCNAVERSEVHVAIEKAISRLKGTDK 622

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKEL-----------VELLFQEGLVKALFATETF 428
            LP I  M  LL RGI VHH GLLP++KE+           VE+LF  GLVK LFATETF
Sbjct: 623 KLPQIARMRDLLSRGIGVHHGGLLPIVKEVRSMSFLPLLWVVEILFARGLVKILFATETF 682

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPAK VVF+ ++K DG S R I  GEY QM+GRAGRRG D  G  II+   ++ E
Sbjct: 683 AMGVNMPAKCVVFSGIRKHDGKSFRDILPGEYTQMAGRAGRRGLDPTGTVIIVTQNELPE 742

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
              L+ M+LG PA L S FRL+Y  ILNL+ R E     E +IK SF +   ++ LPD  
Sbjct: 743 QTALQHMMLGVPAKLSSQFRLTYNMILNLL-RVEA-LRVEEMIKRSFSENASQRLLPDQQ 800

Query: 548 KKVSKLEEEAASL 560
           KKV + E+  +++
Sbjct: 801 KKVVEHEKTLSAM 813



 Score =  122 bits (307), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 120/212 (56%), Gaps = 4/212 (1%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I  LK  + D  ++   D  + R  VLK+L  ID +  V LKGR AC I++ +EL++TEL
Sbjct: 1046 IAMLKMAISDQNLELIPD-YEQRIEVLKELQFIDENSTVLLKGRVACEINSVNELVLTEL 1104

Query: 804  MFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
            +   T    +  +V AL SCF+  +K+  +  +  +LA+    +   + ++  +Q+  K+
Sbjct: 1105 ILENTLAAYEPEEVVALLSCFVFQEKTDSEPVIPPKLAEGRDAIIAISDRVGRVQDRNKV 1164

Query: 864  EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
                 E   S ++  LM+V+Y W+KG  F ++  +TD+ EG+I+R   RLDE   ++R A
Sbjct: 1165 AA---EEFRSNLKFGLMEVVYEWAKGMPFEQITSLTDVAEGTIVRVITRLDETCREVRDA 1221

Query: 924  AQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A+ +G+ +L KK   A   ++R I+F+ SLY 
Sbjct: 1222 ARVIGDADLFKKMEEAQLKIKRDIVFAASLYF 1253


>gi|58271052|ref|XP_572682.1| translation repressor [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57228941|gb|AAW45375.1| translation repressor, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1185

 Score =  407 bits (1045), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 229/543 (42%), Positives = 321/543 (59%), Gaps = 70/543 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           EMAK Y FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 292 EMAKDYPFELDNFQKEAVYRLEMGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKTIYTSP 351

Query: 128 LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+R+    F+   VG++TGDV ++   SCL+MTTEILR MLY+G++++++V +
Sbjct: 352 IKALSNQKFRDFKTTFEPSTVGILTGDVQINAEGSCLIMTTEILRSMLYKGADLIRDVEF 411

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    K+  +V+ 
Sbjct: 412 VVFDEVHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVIS 471

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--------------QK 291
           T  RP PL+H+++   G   + +V  + +F  + +    D   +              Q+
Sbjct: 472 TPMRPVPLEHFLW--AGRETHKIVSSQSKFLMEGYSSASDALRRKQDKEREANGLPPVQR 529

Query: 292 IGGRR---------ENGKAS--GRMAKG------GSGSG--------------------- 313
            GGR            GK++   R+  G      G G+G                     
Sbjct: 530 TGGRGGAAIRAKDLPTGKSAPFTRIGAGRNHTNRGGGNGPPQAAFGGGRGGRGGGRGGFG 589

Query: 314 ---------GSDIFK-IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                      +I+  ++  + +    PV+ F FS++ CE++A ++S LD  T +EK  V
Sbjct: 590 GSSRPSHVLDQNIWTHLISYLKKNMLLPVVNFVFSKKRCEEYAQTLS-LDLCTAKEKSEV 648

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
              ++ A+  L  ED+ LP I  M  LL RGI VHH GLLP++KE+VE+LF  GLVK LF
Sbjct: 649 HITWERALTRLKGEDKTLPQILRMRELLSRGIGVHHGGLLPLVKEVVEILFARGLVKVLF 708

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV- 482
           ATETFAMG+NMPAK+VVF+ ++K DG S R +  GEY QM+GRAGRRG D  G  II+  
Sbjct: 709 ATETFAMGVNMPAKSVVFSGIRKHDGTSFRNLLPGEYTQMAGRAGRRGLDTTGTVIILSG 768

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
           DE   +  L +M+LG P  L S FRL+Y  ILNL+ R E     E +IK SF +   +K 
Sbjct: 769 DELPSVEELNEMMLGVPNRLSSQFRLTYNMILNLL-RVEA-LKVEEMIKRSFSENATQKM 826

Query: 543 LPD 545
            P+
Sbjct: 827 APE 829



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/219 (35%), Positives = 127/219 (57%), Gaps = 4/219 (1%)

Query: 737  KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            + +V   IQ+LK ++ D  ++   D  ++R  VLK+L  ID +  V LKGR AC I++  
Sbjct: 971  RKQVEQRIQKLKLQLSDQNLELLPD-YESRVEVLKRLSFIDENATVLLKGRVACEINSAP 1029

Query: 797  ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            EL++TEL+      D    +V AL S F+ V+K+  Q  +  +L   L  +   A ++  
Sbjct: 1030 ELILTELILENILADYTPEEVVALLSIFVFVEKTESQPIIPTKLQDGLDVIYNIAEQVER 1089

Query: 857  IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
             Q+ C  +V  DE+  +  +P L++V+Y W++G  F E+  +TD+ EG+I+R   RLDE 
Sbjct: 1090 EQDYC--QVQHDEFA-TKYKPGLVEVVYEWARGMPFNEITNLTDVPEGTIVRVITRLDET 1146

Query: 917  LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              ++R AA+ +G+ +L KK   A   +RR I+F+ SLYL
Sbjct: 1147 CREVRDAARVIGDADLFKKMEEAQGLIRRDIVFAASLYL 1185


>gi|325182407|emb|CCA16860.1| mCG15924 putative [Albugo laibachii Nc14]
          Length = 1436

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 230/563 (40%), Positives = 337/563 (59%), Gaps = 44/563 (7%)

Query: 51  TKDEAIHGTFANPVYNGEMAK---TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           TKD A+    +   ++ ++++   +Y FELD FQ+  +  LE +E+V V+AHTSAGKT +
Sbjct: 403 TKDWAVLSDVSVSNFHSKVSRPAISYPFELDTFQKRCIIHLENHENVFVAAHTSAGKTVI 462

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMT 165
           AEYAIA++ +   R +YTSP+KALSNQKYR+  ++F    VGL+TGDV+++P ASCL+MT
Sbjct: 463 AEYAIALSQKHMTRSVYTSPIKALSNQKYRDFREKFGVDQVGLITGDVSINPEASCLIMT 522

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TEILR MLY G+++++++ WVIFDEIHY+ D ERG VWEE II LP  + MVFLSAT  N
Sbjct: 523 TEILRSMLYLGADMIRDIEWVIFDEIHYINDSERGAVWEEVIIMLPYHVGMVFLSATTPN 582

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD---EKEQFREDNFVK 282
             +F++WI  + ++  HVV T  RP PLQH+++       + ++D    KE F    +  
Sbjct: 583 HLEFSDWIGRIKQKKIHVVSTLHRPIPLQHHIY--TNKKFFKILDGEHAKEGFNLKEYKA 640

Query: 283 LQDTFLKQKIGGRRENGKASGRMAKGGSGSGG-----------SDIFKIVKMIMERKFQP 331
            Q     +     ++  K + R  +GG  S             SD  K + ++  +   P
Sbjct: 641 AQGLLRGETPNDNKQ--KDAKRSNRGGQPSRSVHSSRASSGDSSDWTKFINVLQTKSLLP 698

Query: 332 VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF--QNAVDCLNEEDRNLPAIELMLP 389
            +VF+FS+R C++ A  +   DF     + +   VF   +    L   DR LP +  +  
Sbjct: 699 AVVFAFSKRVCQESAEKLRNFDFCANSTERSQIHVFLEHSIKQRLQGSDRELPQVLSIKS 758

Query: 390 LLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDG 449
           +L+RGI +HH GLLP++KELVE+LF  GLV+ LFATETFAMG+NMPA+TVVF  + K DG
Sbjct: 759 MLQRGIGIHHGGLLPILKELVEILFARGLVRVLFATETFAMGVNMPARTVVFNGIHKHDG 818

Query: 450 DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM---EMNTLKDMVLGKPAPLVSTF 506
             +R +  GEY QM+GRAGRRG D  G  +I   ++    +++ L+ M+ G    L S F
Sbjct: 819 KVYRELLPGEYTQMAGRAGRRGLDTVGTVVIPCWQEANLPDLSLLQSMLTGSALRLTSQF 878

Query: 507 RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD--IGKKVSK-----------L 553
           RL+   IL+L+ R E   T E ++K SF +F+ +K L +  I  K+ K           L
Sbjct: 879 RLTSNMILSLL-RVEA-LTVEDMMKRSFSEFRTQKHLANQEIPLKIQKLQRRKLHLVENL 936

Query: 554 EEEAASLDASGEAE-VAEYHKLK 575
           E++   L  SG  E + +YH+L+
Sbjct: 937 EKDYPDLKNSGTLEDLRDYHELQ 959



 Score =  141 bits (356), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 154/284 (54%), Gaps = 19/284 (6%)

Query: 688  PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQL 747
            P L+ ++D+   D EV ++  + ++L+H++  H L     E       +K +V  + Q L
Sbjct: 1156 PFLDSLRDLGCNDLEVANIQARWKQLDHRIQTHALTLFCQE--ATSHTKKLQVTRKAQAL 1213

Query: 748  KSKMRDSQIQK----------------FRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
            +   + + I++                F D  + R RVLK+LG++ +D VVQLKGR AC 
Sbjct: 1214 QVIRKTAAIERACGQLKLMLSSDSLSLFPD-FQQRLRVLKRLGYLSSDLVVQLKGRVACE 1272

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            I + DEL +TE++F     +L+  ++ A+ S  I  +KS     L   L    +Q++  A
Sbjct: 1273 ISSCDELQLTEMIFENVLAELEPEEIVAVLSALIFQEKSQHTPTLTERLENAREQMELIA 1332

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
              +  IQ E ++ V+     E  +   L++V+Y WS+G  F  + ++TDI EGSI+RS  
Sbjct: 1333 DSLEVIQLEQQVAVDRKNTTEKPLNFGLVEVVYEWSRGMPFKSICELTDIPEGSIVRSIT 1392

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RL E   ++R AA+ +G+  L +K   ASE+++R ++F+ SLY+
Sbjct: 1393 RLQELCRKVRNAARIIGDPILYRKMEIASETIKRDVVFAASLYI 1436


>gi|145479601|ref|XP_001425823.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392895|emb|CAK58425.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1486

 Score =  402 bits (1033), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 213/525 (40%), Positives = 319/525 (60%), Gaps = 42/525 (8%)

Query: 52  KDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYA 111
           +DE     F + +   +MAK + FELD FQ+ S+  LE+ ESV V AHTSAGKT +AEYA
Sbjct: 423 EDETDMSNFYDQLPKAKMAKQFQFELDDFQKRSILHLEKKESVFVCAHTSAGKTVIAEYA 482

Query: 112 IAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRG 171
           IA+AF+  +R +YTSP+KALSNQK+RE  Q+F + G++TGDV+++P A CL++TTEILR 
Sbjct: 483 IALAFKHNRRALYTSPIKALSNQKFREFDQKFGNTGVVTGDVSINPGAPCLILTTEILRN 542

Query: 172 MLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAE 231
           MLYRG+E+++++ WVIFDE+HY+ D+ERG+VWEE+II LP  I ++ LSAT+ N   FA 
Sbjct: 543 MLYRGAELIRDIEWVIFDEVHYVNDQERGMVWEETIIMLPQHIGIIMLSATVPNYMDFAN 602

Query: 232 WICHLHKQPCHVVYTDFRPTPLQHYVFPVGG-------SGLYL-------------VVDE 271
           W+    KQ   V+ T  RP PL+H++F            G +L             + DE
Sbjct: 603 WVGRTRKQKVFVMKTFTRPVPLEHHIFLFDKFHTIKERDGDFLAQEYNGLKKKIKEIEDE 662

Query: 272 KEQFRE-----------DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSD--IF 318
           K+  +E           D   K  +  ++QK+  ++   K    ++            + 
Sbjct: 663 KKGLKERIKKNMDEKKDDELYKNTNKSMRQKLTQKQIKSKFIQNISAANMKQKDEKRAMT 722

Query: 319 KIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK---LDFNTQEEKDTVEQVFQNAVDCLN 375
           +++++  ++   P ++F FSR++  + A S++K   L     + +  +   F  A+  L 
Sbjct: 723 QLIRLCEKKDLLPCVIFVFSRKKINELAESITKQNSLKLIDHKTEARIIGFFDQALLKLK 782

Query: 376 EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
            +DR  P +  +  LL+ GIA+HH  LLP+ KE+VE+LF EGL+K LFATETFAMG+NMP
Sbjct: 783 SQDRQSPQLIRLRELLRFGIAIHHGHLLPIAKEIVEILFSEGLIKVLFATETFAMGINMP 842

Query: 436 AKTVVFTAVKKWDG-DSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT---L 491
            KTV+F +V+K+DG ++ R + S EY QMSGRAGRRG D++G  II + +   +     +
Sbjct: 843 TKTVIFHSVEKFDGSNTKRMLHSSEYTQMSGRAGRRGIDEKGNVIIYIKDAQNLPDELRM 902

Query: 492 KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
           K MV  K   L S F+++Y  ILNL++  +    A  ++K SFH+
Sbjct: 903 KQMVDSKGLQLDSKFKITYSIILNLLTSKD--IDATEMMKRSFHE 945



 Score = 79.3 bits (194), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 125/248 (50%), Gaps = 23/248 (9%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMR--DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
            +  ++  Q K ++ +++  +K K++  D+Q Q    +  N+   LK LG++D  G+  +K
Sbjct: 1232 DKHLQQLQLKEKLKNDMLDIKKKIQGNDNQSQS---DFNNKLNALKLLGYVDQAGLPLIK 1288

Query: 786  GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-----PVDKSSEQINLRMEL 840
             R A  +     + + E++ +     L   ++AAL + F+       D+  ++ N+ + L
Sbjct: 1289 ARIARELMDQSSIYICEVLVDNIMETLKPSEIAALMAAFVCQDRRKFDEEFDESNIEVML 1348

Query: 841  AKPLQQ--LQESARKIAE-------IQNECKLEV----NVDEYVESTVRPFLMDVIYCWS 887
             K   +  L+ S   IA        I+ E K++     +  E++++ +   L  VIY W+
Sbjct: 1349 HKKFDEISLELSGAIIATYVLIKKTIEEEMKMDAVDSKDSTEHIKNVLNFNLTQVIYLWA 1408

Query: 888  KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGI 947
            +G +F +V   TDI EGSI+R+ +RL+  L  +  A + +G + +  K   A   +++ I
Sbjct: 1409 QGQSFVDVCLQTDIEEGSIVRTIQRLENMLRGVINAFRVMGNLKMVDKVEKACLLIKKDI 1468

Query: 948  MFSNSLYL 955
            +F+ SLY 
Sbjct: 1469 VFAESLYF 1476


>gi|390333602|ref|XP_793590.2| PREDICTED: helicase SKI2W [Strongylocentrotus purpuratus]
          Length = 1139

 Score =  399 bits (1026), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/475 (43%), Positives = 290/475 (61%), Gaps = 52/475 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y FELD FQ+ +V  LE ++SV V+AHTSAGKT VAEYAIA++ R   R +YTSP+
Sbjct: 244 MAHQYPFELDIFQKQAVLQLENHQSVFVAAHTSAGKTVVAEYAIALSMRHLTRTVYTSPI 303

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+    F DVGL+TGDV + P ASCL+MTTEILR MLY GS+V++++ WVIF
Sbjct: 304 KALSNQKFRDFKNTFGDVGLLTGDVQIKPEASCLIMTTEILRSMLYNGSDVIRDLEWVIF 363

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ N  +FA+W+ +             
Sbjct: 364 DEVHYINDSERGVVWEEVLIMLPEHVNIILLSATVPNTMEFADWVGY------------- 410

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
                                  KE  +             +K    + +     +  + 
Sbjct: 411 -----------------------KEAVK------------AKKARATKSSAAFGAKGNRE 435

Query: 309 GSGSGGSDIFKIVKMIMERKFQ-PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
           G      +++  V  ++ +K Q P++ F+FS++ C  ++  +S LD  T  EK  +    
Sbjct: 436 GHFKSDKNVYMSVVEMLRKKEQLPIVCFTFSKKRCNDNSSQLSNLDLTTSSEKSEITVFI 495

Query: 368 QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
           +  VD L   D+ LP +  +  LLK GI VHHSG+LP++KE+VE+LFQ GLVK LFATET
Sbjct: 496 KKCVDRLKGSDKKLPQVVHLSGLLKHGIGVHHSGILPILKEVVEMLFQRGLVKLLFATET 555

Query: 428 FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM- 486
           FAMG+NMPA+TV+F ++KK+DG + R++  GEYIQM+GRAGRRG D  G+ II+    + 
Sbjct: 556 FAMGVNMPARTVLFDSIKKFDGTNKRHLHPGEYIQMAGRAGRRGLDTTGMVIILCKGDVP 615

Query: 487 EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           E + L  M+ G+P  L S FRL+Y  ILNL+ R E +   E ++K SF +F   K
Sbjct: 616 ETSDLHYMMKGRPTKLESQFRLTYSMILNLL-RVE-ELRVEDMMKRSFSEFTTRK 668



 Score =  148 bits (373), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 167/305 (54%), Gaps = 26/305 (8%)

Query: 660  PPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFA 719
            PP    + A Q +L     L    P  L  L+PVKD+ I +   +DLV   E+  ++ + 
Sbjct: 849  PPGQSAVSATQELL----RLTEANPDSLDTLDPVKDLSIRE---MDLV---EKFINRAY- 897

Query: 720  HPLNKSQDE-NQIRCF---QRKAEVNHEIQQLKSKMRDSQIQKFRD------ELKNRSRV 769
              + K+ D+ N I CF   Q  A + H+++ L+  MR  +            E   R +V
Sbjct: 898  --VEKTVDQFNCILCFNFQQHYANMCHKMKLLED-MRHYRYLLSDRSLLLLPEYHQRIQV 954

Query: 770  LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
            LK+L HID    +QLKGR AC I +  ELL+TEL+F    +    +++AAL SC +  ++
Sbjct: 955  LKELNHIDKTNTIQLKGRVACEI-SNHELLITELVFQNILSLYPPNEIAALLSCMVFQER 1013

Query: 830  SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
               +  L  EL   ++++QE A +I  +Q+ C +++  ++YVE   R  L  V+Y W+ G
Sbjct: 1014 RCSEPELTKELNYGVKRIQEEALRIGTLQHRCGVQMPAEDYVEQ-YRFGLTQVVYEWANG 1072

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
              F+E+I +TD+ EG I+R+ +RLDE    +R AA+ VG+  L  K   AS+ ++R I+F
Sbjct: 1073 MEFSEIIGLTDVTEGIIVRTIQRLDEVCRDVRNAARIVGDPILFSKMEEASQLIKRDIVF 1132

Query: 950  SNSLY 954
            + SLY
Sbjct: 1133 TASLY 1137


>gi|444721130|gb|ELW61883.1| Helicase SKI2W [Tupaia chinensis]
          Length = 1290

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 217/527 (41%), Positives = 312/527 (59%), Gaps = 18/527 (3%)

Query: 118 DKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS 177
           + +  IYTSP+KALSNQK+R+    F DVGL+TGDV L P ASCLVMTTEILR MLY GS
Sbjct: 415 EGESTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLVMTTEILRSMLYSGS 474

Query: 178 EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH 237
           +V++++ WVIFDE+HY+ D ERGVVWEE +I LP  + ++ LSAT+ NA +FA+WI  L 
Sbjct: 475 DVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPDHVSIILLSATVPNALEFADWIGRLK 534

Query: 238 KQPCHVVYTDFRPTPLQHYVF----PVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG 293
           ++   V+ T  RP PL+HY+F    P     L+L++D +  F    +    +   K+++ 
Sbjct: 535 RRQIFVISTAARPVPLEHYLFTGNSPKTQGELFLLLDSRGSFHTKGYYAAVEA-KKERMS 593

Query: 294 GRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLD 353
              +   A     +GG          ++  +  R   PV+VF+FSR  C++ A S++ LD
Sbjct: 594 KHAQTFGAKQPTHQGGPAQDRGVYLSLLGSLRARAQLPVVVFTFSRGRCDEQASSLTSLD 653

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
             T  EK  +    Q  +  L   DR LP +  M  LL RG+ VHHSG+LP++KE+VE+L
Sbjct: 654 LTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLHMSELLHRGLGVHHSGVLPILKEIVEML 713

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLVK LFATETFAMG+NMPA+TVVF +++K DG + R +  GEY+QM+GRAGRRG D
Sbjct: 714 FSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLD 773

Query: 474 DRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
             G  I++   ++ EM  L  M++GKP+ L S FRL+Y  ILNL+ R +     E ++K 
Sbjct: 774 PTGTVILLCKARVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLL-RVDA-LRVEDMMKR 831

Query: 533 SFHQFQ-------YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKL 585
           SF +F        +E+ L ++ KK+  LEE   +   S   ++ EY+    ++ +    +
Sbjct: 832 SFSEFPSRKDSKIHEQTLAELTKKLEALEEPDVT---SQLVDLPEYYSWGEELTETRNMI 888

Query: 586 MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
              I      L  L  GR++ V+        GV++ V    S+ V T
Sbjct: 889 QRRIMESVNGLKSLSVGRVVVVKNQEHHNALGVILQVSSNSSSRVFT 935



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 134/256 (52%), Gaps = 7/256 (2%)

Query: 671  SILLAVQEL---ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKL-FAHPLNKSQ 726
            ++  AVQEL       P G P L+PV D++++D  VV+   +  +LE  +  A  ++  +
Sbjct: 1023 AVTTAVQELLRLAQAHPAGPPTLDPVNDLQLKDVSVVEGGLRARKLEELIRGAQCVHSPR 1082

Query: 727  DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
               Q    + + ++  E+++L+  + D  +     E   R  VL+ LG++D  G V+L G
Sbjct: 1083 FPAQYVKLRERMQIQKEMERLRFLLSDQSLLL-LPEYHQRVEVLRTLGYVDETGTVKLAG 1141

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
            R AC + +  ELL+TELMF+   + L   ++AAL S  +          L   L + +++
Sbjct: 1142 RVACAMSS-HELLLTELMFDNALSALRPEEIAALLSGLVCQSPGDPGDQLPSTLKEGVER 1200

Query: 847  LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
            ++  A++I E+Q  C L   V+E+V   +   L +V+Y W++G  F+E+  ++   EG +
Sbjct: 1201 VRAVAKRIGEVQVACGLNQTVEEFV-GELNFGLAEVVYEWARGMPFSELAGLSGTPEGLV 1259

Query: 907  IRSARRLDEFLNQLRA 922
            +R  +RL E    LR 
Sbjct: 1260 VRCIQRLGEMCRSLRG 1275



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 64/83 (77%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FE D FQ+ ++  LER++SV V+AHTSAGKT VAEYAIA+A +   R IYTSP+KALS
Sbjct: 298 WPFEPDAFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALS 357

Query: 133 NQKYRELHQEFKDVGLMTGDVTL 155
           NQK+R+    F DVGL+TGDV L
Sbjct: 358 NQKFRDFRNTFGDVGLLTGDVQL 380


>gi|221504778|gb|EEE30443.1| DEAD/DEAH box helicase domain-containing protein, putative
            [Toxoplasma gondii VEG]
          Length = 1329

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/581 (39%), Positives = 338/581 (58%), Gaps = 48/581 (8%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            +A  + F LD FQ+ ++  LE+ ++V V+AHTSAGKT VAEYAIA+A R  +R IYTSPL
Sbjct: 450  LALEFPFPLDDFQKRAILHLEKYQTVFVAAHTSAGKTVVAEYAIALAVRRNRRCIYTSPL 509

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQKYRE   +F  VG++TGDV ++P+A+CL++TTEILR +LY G  ++ +V  VIF
Sbjct: 510  KALSNQKYREFRLKFPSVGIVTGDVCINPDANCLIVTTEILRSLLYLGDALIGQVDSVIF 569

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE HY+ D ERGVVWEE+II LP  + MV LSAT+ N  QFAEWI  + ++    + TD 
Sbjct: 570  DEAHYINDIERGVVWEEAIILLPKQVNMVLLSATLPNYRQFAEWIGSVKQREVFTLSTDR 629

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFR----EDNFVKLQDTFLKQKIGGRRENGKASGR 304
            RPTPL+H++F       +L++D K +F+     + F  +++    Q    R+    ++ +
Sbjct: 630  RPTPLRHFLF--FHDKAFLLMDAKGRFQAGAYNEAFKHVREKGNPQ--AARKPPPSSAAQ 685

Query: 305  MAKGG--------SGSGGSDIFKIVKMIMERKFQ---------------PVIVFSFSRRE 341
              +GG        S      +F+  +  ++ +                 PV+VF FSRR+
Sbjct: 686  RGRGGTRQALRESSHQSSKGVFQTAEAKLKTEIHRLQGLITKLEKDNELPVVVFCFSRRK 745

Query: 342  CEQHAMSMSKLDFN-TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
            CE +A +M +LD   +  ++  +    ++ +  L+  DR+LP I  +  L+ RG+ +HH 
Sbjct: 746  CETYAQAMRRLDVVLSHNDRSKIHLFVKDCLMALSPADRDLPQIRFVCGLIHRGVGIHHG 805

Query: 401  GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
            GLLP+IKE+VE+LFQ GLV+ LFATET A+GLNMPA++VVF+A+KK DG   R + + EY
Sbjct: 806  GLLPIIKEMVEILFQRGLVRVLFATETLAIGLNMPARSVVFSALKKHDGQRSRMLLASEY 865

Query: 461  IQMSGRAGRRGKDDRG-ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
             QM+GRAGRRG D  G + I   D+  E   L  M++ K  PL S FRL+Y ++L L +R
Sbjct: 866  TQMAGRAGRRGIDTFGHVYIFCSDDLPEPKELTGMMVEKANPLHSRFRLTYQTLLLLAAR 925

Query: 520  AEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLK 575
            +    +    +  SF +      LP   + + +  +E  +L       GE  +       
Sbjct: 926  SH-SMSMTSFLSQSFKEAARTSLLPVFKRDLRRKRKELHALPDVRCVFGEPAIE------ 978

Query: 576  LDIAQLEKK---LMSEITRPERVLYYLGSGRLIKVREGGTD 613
             D+A+LE +   +  EI  P  +     +  L   RE G D
Sbjct: 979  -DLAELEDRSRGIAEEIHMPTNLSNAGAAAPLGDGREPGRD 1018



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 4/222 (1%)

Query: 736  RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA-DGVVQLKGRAACLIDT 794
            ++ E+  EI ++ S++ D  +  +  E++ R  V+KKL  ID   G + +KGR AC + +
Sbjct: 1109 KQLELMAEIAEISSQLADESLDVY-PEMQARLTVMKKLKLIDDHTGALTVKGRVACQVMS 1167

Query: 795  GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME-LAKPLQQLQESARK 853
            GDEL +TEL+F G   +L   ++AA+ S F+  D   EQ+      + +   Q +E    
Sbjct: 1168 GDELTLTELLFQGGLENLQPEEIAAVLSAFVAPDGPVEQVPAPTAGIQRVRDQAEELHVA 1227

Query: 854  IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            I ++Q    + +N +++ +      L  V Y W+ G +F +++  T+  EGSI+R+  RL
Sbjct: 1228 ILKLQANSGVRINAEDWWK-LCNFSLSLVAYDWANGVSFGDIMHKTNAQEGSIVRAILRL 1286

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            DE L ++R AA  +G+ +L  K    S+ +RR I+F+ SLYL
Sbjct: 1287 DELLRKIRQAAILIGDPDLGAKLQQTSDRIRRDIVFAMSLYL 1328


>gi|237839813|ref|XP_002369204.1| DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii
            ME49]
 gi|211966868|gb|EEB02064.1| DEAD/DEAH box helicase domain-containing protein [Toxoplasma gondii
            ME49]
          Length = 1329

 Score =  397 bits (1021), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/581 (39%), Positives = 338/581 (58%), Gaps = 48/581 (8%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            +A  + F LD FQ+ ++  LE+ ++V V+AHTSAGKT VAEYAIA+A R  +R IYTSPL
Sbjct: 450  LALEFPFPLDDFQKRAILHLEKYQTVFVAAHTSAGKTVVAEYAIALAVRRNRRCIYTSPL 509

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQKYRE   +F  VG++TGDV ++P+A+CL++TTEILR +LY G  ++ +V  VIF
Sbjct: 510  KALSNQKYREFRLKFPSVGIVTGDVCINPDANCLIVTTEILRSLLYLGDALIGQVDSVIF 569

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE HY+ D ERGVVWEE+II LP  + MV LSAT+ N  QFAEWI  + ++    + TD 
Sbjct: 570  DEAHYINDIERGVVWEEAIILLPKQVNMVLLSATLPNYRQFAEWIGSVKQREVFTLSTDR 629

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFR----EDNFVKLQDTFLKQKIGGRRENGKASGR 304
            RPTPL+H++F       +L++D K +F+     + F  +++    Q    R+    ++ +
Sbjct: 630  RPTPLRHFLF--FHDKAFLLMDAKGRFQAGAYNEAFKHVREKGNPQ--AARKPPPSSAAQ 685

Query: 305  MAKGG--------SGSGGSDIFKIVKMIMERKFQ---------------PVIVFSFSRRE 341
              +GG        S      +F+  +  ++ +                 PV+VF FSRR+
Sbjct: 686  RGRGGTRQALRESSHQSSKGVFQTAEAKLKTEIHRLQGLITKLEKDNELPVVVFCFSRRK 745

Query: 342  CEQHAMSMSKLDFN-TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
            CE +A +M +LD   +  ++  +    ++ +  L+  DR+LP I  +  L+ RG+ +HH 
Sbjct: 746  CETYAQAMRRLDVVLSHNDRSKIHLFVKDCLMALSPADRDLPQIRFVCGLIHRGVGIHHG 805

Query: 401  GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
            GLLP+IKE+VE+LFQ GLV+ LFATET A+GLNMPA++VVF+A+KK DG   R + + EY
Sbjct: 806  GLLPIIKEMVEILFQRGLVRVLFATETLAIGLNMPARSVVFSALKKHDGQRSRMLLASEY 865

Query: 461  IQMSGRAGRRGKDDRG-ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
             QM+GRAGRRG D  G + I   D+  E   L  M++ K  PL S FRL+Y ++L L +R
Sbjct: 866  TQMAGRAGRRGIDTFGHVYIFCSDDLPEPKELTGMMVEKANPLHSRFRLTYQTLLLLAAR 925

Query: 520  AEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLK 575
            +    +    +  SF +      LP   + + +  +E  +L       GE  +       
Sbjct: 926  SH-SMSMTSFLSQSFKEAARTSLLPVFKRDLRRKRKELHALPDVRCVFGEPAIE------ 978

Query: 576  LDIAQLEKK---LMSEITRPERVLYYLGSGRLIKVREGGTD 613
             D+A+LE +   +  EI  P  +     +  L   RE G D
Sbjct: 979  -DLAELEDRSRGIAEEIHMPTNLSNAGAAAPLGDGREPGRD 1018



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 4/222 (1%)

Query: 736  RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA-DGVVQLKGRAACLIDT 794
            ++ E+  EI ++ S++ D  +  +  E++ R  V+KKL  ID   G + +KGR AC + +
Sbjct: 1109 KQLELMAEIAEISSQLADESLDVY-PEMQARLTVMKKLKLIDDHTGALTVKGRVACQVMS 1167

Query: 795  GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME-LAKPLQQLQESARK 853
            GDEL +TEL+F G   +L   ++AA+ S F+  D   EQ+      + +   Q +E    
Sbjct: 1168 GDELTLTELLFQGGLENLQPEEIAAVLSAFVAPDGPVEQVPAPTAGIQRVRDQAEELHVA 1227

Query: 854  IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            I ++Q    + +N +++ +      L  V Y W+ G +F +++  T+  EGSI+R+  RL
Sbjct: 1228 ILKLQANSGVRINAEDWWK-LCNFSLSLVAYDWANGVSFGDIMHKTNAQEGSIVRAILRL 1286

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            DE L ++R AA  +G+ +L  K    S+ +RR I+F+ SLYL
Sbjct: 1287 DELLRKIRQAAILIGDPDLGAKLQQTSDRIRRDIVFAMSLYL 1328


>gi|221484584|gb|EEE22878.1| DEAD/DEAH box helicase domain-containing protein, putative
            [Toxoplasma gondii GT1]
          Length = 1329

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 229/581 (39%), Positives = 338/581 (58%), Gaps = 48/581 (8%)

Query: 69   MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            +A  + F LD FQ+ ++  LE+ ++V V+AHTSAGKT VAEYAIA+A R  +R IYTSPL
Sbjct: 450  LALEFPFPLDDFQKRAILHLEKYQTVFVAAHTSAGKTVVAEYAIALAVRRNRRCIYTSPL 509

Query: 129  KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
            KALSNQKYRE   +F  VG++TGDV ++P+A+CL++TTEILR +LY G  ++ +V  VIF
Sbjct: 510  KALSNQKYREFRLKFPSVGIVTGDVCINPDANCLIVTTEILRSLLYLGDALIGQVDSVIF 569

Query: 189  DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
            DE HY+ D ERGVVWEE+II LP  + MV LSAT+ N  QFAEWI  + ++    + TD 
Sbjct: 570  DEAHYINDIERGVVWEEAIILLPKQVNMVLLSATLPNYRQFAEWIGSVKQREVFTLSTDR 629

Query: 249  RPTPLQHYVFPVGGSGLYLVVDEKEQFR----EDNFVKLQDTFLKQKIGGRRENGKASGR 304
            RPTPL+H++F       +L++D K +F+     + F  +++    Q    R+    ++ +
Sbjct: 630  RPTPLRHFLF--FHDKAFLLMDAKGRFQAGAYNEAFKHVREKGNPQ--AARKPPPSSAAQ 685

Query: 305  MAKGG--------SGSGGSDIFKIVKMIMERKFQ---------------PVIVFSFSRRE 341
              +GG        S      +F+  +  ++ +                 PV+VF FSRR+
Sbjct: 686  RGRGGTRQALRESSHQSSKGVFQTAEAKLKTEIHRLQGLITKLEKDNELPVVVFCFSRRK 745

Query: 342  CEQHAMSMSKLDFN-TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
            CE +A +M +LD   +  ++  +    ++ +  L+  DR+LP I  +  L+ RG+ +HH 
Sbjct: 746  CETYAQAMRRLDVVLSHNDRSKIHLFVKDCLMALSPADRDLPQIRFVCGLIHRGVGIHHG 805

Query: 401  GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
            GLLP+IKE+VE+LFQ GLV+ LFATET A+GLNMPA++VVF+A+KK DG   R + + EY
Sbjct: 806  GLLPIIKEMVEILFQRGLVRVLFATETLAIGLNMPARSVVFSALKKHDGQRSRMLLASEY 865

Query: 461  IQMSGRAGRRGKDDRG-ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
             QM+GRAGRRG D  G + I   D+  E   L  M++ K  PL S FRL+Y ++L L +R
Sbjct: 866  TQMAGRAGRRGIDTFGHVYIFCSDDLPEPKELTGMMVEKANPLHSRFRLTYQTLLLLAAR 925

Query: 520  AEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLK 575
            +    +    +  SF +      LP   + + +  +E  +L       GE  +       
Sbjct: 926  SH-SMSMTSFLSQSFKEAARTSLLPVFKRDLRRKRKELHALPDVRCVFGEPAIE------ 978

Query: 576  LDIAQLEKK---LMSEITRPERVLYYLGSGRLIKVREGGTD 613
             D+A+LE +   +  EI  P  +     +  L   RE G D
Sbjct: 979  -DLAELEDRSRGIAEEIHMPTNLSNAGAAAPLGDGREPGRD 1018



 Score =  119 bits (298), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 125/222 (56%), Gaps = 4/222 (1%)

Query: 736  RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA-DGVVQLKGRAACLIDT 794
            ++ E+  EI ++ S++ D  +  +  E++ R  V+KKL  ID   G + +KGR AC + +
Sbjct: 1109 KQLELMAEIAEISSQLADESLDVY-PEMQARLTVMKKLKLIDDHTGALTVKGRVACQVMS 1167

Query: 795  GDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRME-LAKPLQQLQESARK 853
            GDEL +TEL+F G   +L   ++AA+ S F+  D   EQ+      + +   Q +E    
Sbjct: 1168 GDELTLTELLFQGGLENLQPEEIAAVLSAFVAPDGPVEQVPAPTAGIQRVRDQAEELHVA 1227

Query: 854  IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            I ++Q    + +N +++ +      L  V Y W+ G +F +++  T+  EGSI+R+  RL
Sbjct: 1228 ILKLQANSGVRINAEDWWK-LCNFSLSLVAYDWANGVSFGDIMHKTNAQEGSIVRAILRL 1286

Query: 914  DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            DE L ++R AA  +G+ +L  K    S+ +RR I+F+ SLYL
Sbjct: 1287 DELLRKIRQAAILIGDPDLGAKLQQTSDRIRRDIVFAMSLYL 1328


>gi|328700737|ref|XP_001948018.2| PREDICTED: helicase SKI2W-like [Acyrthosiphon pisum]
          Length = 1181

 Score =  397 bits (1020), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 212/473 (44%), Positives = 299/473 (63%), Gaps = 16/473 (3%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  + FELD FQ+ +V  LE   SV V+AHTSAGKT +AEYAIA+A + + R IYTSP+K
Sbjct: 238 AYKWEFELDTFQKQAVLKLEEKSSVFVAAHTSAGKTVIAEYAIALAKKHQLRCIYTSPIK 297

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+R+  ++F DVGL+TGD  + P A CL++TTEIL  MLY  S+ +KE  +VI D
Sbjct: 298 ALSNQKFRDFKKKFGDVGLITGDFQVKPEAQCLIVTTEILCSMLYSDSDKIKETEFVILD 357

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ DR+RG +WE+ +I LP  +K+V LSAT++N   FA WI        +VV+T +R
Sbjct: 358 EVHYVNDRDRGHIWEQILIMLPKRVKLVMLSATVTNVIDFANWIGRTRDSKIYVVFTLYR 417

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           P PL+HY++ +G +    + D     R     K    FL Q      +  K +  + K  
Sbjct: 418 PVPLEHYLY-IGSNTSMEMKDNMHLIR-----KADSGFLIQGYRKAADLLKKNKEVKKYQ 471

Query: 310 SGSGGSD----IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM-SKLDF--NTQEEKDT 362
                 D        ++ + +    PV+VF  SR++C+  A S+ + ++F  N +E +  
Sbjct: 472 ESKNFKDQKPKWVNFLRFLDKNNLFPVVVFILSRKKCDMMAESLKNSVNFLLNNKESQAN 531

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            E  F +A+  L  EDR LP + LM  LL +GIAVHHSG+LP++KE+VE+ FQ+ LVK L
Sbjct: 532 -EYFFNDAIKKLKPEDRALPQVVLMKELLCQGIAVHHSGILPILKEIVEMQFQKSLVKCL 590

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFA+G+NMPA+TVVF A+ K+DG   R +   EY QM+GRAGRRG DD G  IIM 
Sbjct: 591 FATETFAIGINMPARTVVFEAINKFDGIEKRNLAPAEYTQMAGRAGRRGHDDSGTVIIMA 650

Query: 483 DEQMEMN-TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
           ++Q+  +  L +M+LGK A L S F++SY  ILN+  +   + T E ++ +SF
Sbjct: 651 NDQLPNDRELTNMMLGKSAKLESQFKVSYSIILNMFKKKNSE-TLEEILGSSF 702



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 119/231 (51%), Gaps = 18/231 (7%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA-DGVVQLKG 786
            E Q R  +R AE+ H++     ++ +  I K          +LK+L +I+  + +   KG
Sbjct: 965  EYQTR-IERIAELQHQVSNKALQLYNEYISKVE--------ILKELKYINPRNEITTQKG 1015

Query: 787  RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQ 846
              A  + +  ELLVTEL+    F ++   ++AA+ SC +   KS    N+ +E  K  Q 
Sbjct: 1016 NVAATMGSH-ELLVTELLLCNMFEEMKPEEIAAVLSCLVCESKS----NIDLEQIKE-QN 1069

Query: 847  LQESARKIAEIQNECKL-EVN-VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            L      I +  +  ++ E N +  Y    +   L+ V+Y W++   F+E++++TDI EG
Sbjct: 1070 LINGMNLIKQKHDYIQMVESNYLSNYERVNLNFNLVKVLYLWAQEKPFSEIMEITDIQEG 1129

Query: 905  SIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             I+R   +L+E L  ++ AA+ +G   + +K     + ++R I+F+ SLY+
Sbjct: 1130 IIVRCIVQLNEILTVIKNAAKMIGTNKISEKMQEVLDKIKRNIVFTPSLYM 1180


>gi|340506400|gb|EGR32541.1| hypothetical protein IMG5_078670 [Ichthyophthirius multifiliis]
          Length = 1298

 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 213/536 (39%), Positives = 318/536 (59%), Gaps = 49/536 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  + FELD FQ+ ++  LE NESV V AHTSAGKT VAEYAIA+A ++K++ IYTSP+
Sbjct: 290 MAIKFDFELDNFQKRAILRLEENESVFVCAHTSAGKTVVAEYAIALAKKNKRKAIYTSPI 349

Query: 129 KALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           KALSNQKYR+   +F +DVG++TGDV+L+P ASCL++TTE+LR MLY+G +++++++WVI
Sbjct: 350 KALSNQKYRDFKLKFGQDVGIVTGDVSLNPTASCLIVTTEVLRNMLYKGHDIIRDISWVI 409

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ +++RGVVWEE+II LP +I +V LSAT  N   FA+W+    K+   V  T 
Sbjct: 410 FDEVHYVNNQDRGVVWEETIIMLPESIGLVMLSATAPNYMDFADWVGRTKKKNIFVQKTT 469

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK------- 300
           FRP PL+H ++       +LV    E   E ++  ++     ++I  +R+N K       
Sbjct: 470 FRPVPLEHSIYV--NEKFHLVKSRNEALDEKSYYNIKKEL--EQIDNQRKNVKFNKGQML 525

Query: 301 ----------------ASGRMAK----------------GGSGSGGSDIFKIVKMIMERK 328
                            S  M+K                GG  +    + K++K   + K
Sbjct: 526 AQKKEKDIYKNTNLSQKSKAMSKKYTEMYIKKTSKVNVGGGQKTEAQQMKKLLKYCEKTK 585

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             P +VF FS+ + ++ + S+  + F + EE+  +E+ F      +  +D  +  I+ + 
Sbjct: 586 LLPCVVFVFSKNKIKELSESLKNISFCSLEERRKIEEFFNKFSRNIKSQDLKVQQIQTIK 645

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWD 448
            L+  GI VHH  ++P +KE+VE+LF EGL+K LFATETFAMG+NMP KT +F ++ K D
Sbjct: 646 TLMMCGIGVHHGDVIPFVKEIVEILFSEGLIKVLFATETFAMGINMPTKTAIFHSISKHD 705

Query: 449 GDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT---LKDMVLGKPAPLVST 505
           G   R + S EY QMSGRAGRRG D++G CII + E  ++ +   LK M+  K   L S 
Sbjct: 706 GQGRRILNSSEYTQMSGRAGRRGLDEQGNCIIFIAEGRQLPSKLDLKLMMDSKGEVLQSK 765

Query: 506 FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
           F++SY  IL L++  E   T   ++K S+ +      L     K+  L+++   LD
Sbjct: 766 FKISYEIILKLLTSQEINVT--DMMKKSYLENSKHANLSQNVNKIKDLKQDLIQLD 819



 Score =  103 bits (256), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 128/246 (52%), Gaps = 25/246 (10%)

Query: 728  ENQIRCFQRKAEVNHEIQQLKSKMRD---SQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
            E  ++ +  K ++N ++++L   + D   +Q+Q FR +LK    VL+KL + D + +  L
Sbjct: 1057 EKHVQQYLNKNKINSQLEELFKNIDDEEITQLQSFRGKLK----VLQKLNYTDNENLPLL 1112

Query: 785  KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK---SSEQINLRMELA 841
            K R A  I+    + V EL+  G F+ L   ++A+L SCFI   K    +E+ +L  +  
Sbjct: 1113 KARVAKEIEL---IYVCELLVQGIFDQLTEPELASLLSCFICQSKPKMGAERYDLLTDYD 1169

Query: 842  KP-------LQQLQESARKI-----AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
                     +++ ++S   +      EI+N   +  + D+Y++    P L  V+Y W KG
Sbjct: 1170 NGFGYDEFFIEKYEQSITILKDIINTEIENGVVIAASEDDYLQEVFNPELSKVVYEWMKG 1229

Query: 890  ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
              F  + Q+T++ EGSIIR   RL+  +  L+ AA  +G   L  K   A + ++R I+F
Sbjct: 1230 KDFFTICQLTEVQEGSIIRCLVRLENLMKNLKNAAILLGNNQLCMKIEQAQDIMKRDIVF 1289

Query: 950  SNSLYL 955
            S SLYL
Sbjct: 1290 SQSLYL 1295


>gi|255075443|ref|XP_002501396.1| predicted protein [Micromonas sp. RCC299]
 gi|226516660|gb|ACO62654.1| predicted protein [Micromonas sp. RCC299]
          Length = 1029

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 231/622 (37%), Positives = 339/622 (54%), Gaps = 74/622 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E A  + FELD FQ+ ++  LERNE V V+AHTSAGKT VAEYA A+A +   R IYTSP
Sbjct: 24  EPAHAFPFELDTFQKEAIYRLERNECVFVAAHTSAGKTVVAEYAFALATKHCTRAIYTSP 83

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQK+R+  ++F DVGL+TGDV++  +A CL+MTTEILR MLYRG++++++V WVI
Sbjct: 84  IKTISNQKFRDFGKQF-DVGLLTGDVSIKADAPCLIMTTEILRSMLYRGADLIRDVEWVI 142

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + +V LSAT+ N  +FA+W+    ++   V  T 
Sbjct: 143 FDEVHYVNDAERGVVWEEVIIMLPAHVGLVLLSATVPNVWEFADWVGRTKRKKVFVTGTT 202

Query: 248 FRPTPLQHYVFPVGGSGL--YLVVDEKEQFREDNFVKLQDTFLKQKI------------- 292
            RP PL+H ++  GG     +  + E+EQF    +    D   K K              
Sbjct: 203 RRPVPLEHMLY-FGGDKEEDFYKIGEREQFLPGGYKAATDALNKSKKPSTSSGGGPGVPG 261

Query: 293 ------------------------GGRRENGKASGRMAKGGSGSG--GSD---IFKIVKM 323
                                    G +  G+ SG     G   G  G D     ++++ 
Sbjct: 262 AGRGSGRGGGRDGGRGGYGRGAGNSGNKHPGRGSGGAPNTGGAMGVRGRDKSVWVELIRC 321

Query: 324 IMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
           + +R+  P++VF+FS++ C+Q   S++ +D     EK  +    +  +  L+  DR LP 
Sbjct: 322 LEKRELLPMVVFAFSKKRCDQMVDSLTGMDLTAGAEKHEIHIFCERCLSRLSPADRQLPQ 381

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           +  +  LL+RG+ VHH+GLLP++KE+VE+LF  GL+K LF+TETFAMG+N PA+ V F  
Sbjct: 382 VLRVRELLRRGLGVHHAGLLPIMKEIVEMLFCRGLLKVLFSTETFAMGVNAPARCVCFQD 441

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPL 502
           ++K DG   R +  GEY QM+GRAGRRG D  G  II   D   + +T++ ++ GK   L
Sbjct: 442 LRKHDGQDFRGLLPGEYTQMAGRAGRRGLDSVGTVIIAAWDNFPQESTVRTLLSGKATKL 501

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD----------IGKKVSK 552
            S FRL+Y  ILNLM R E     E ++  SF +F  ++++ D            K+V++
Sbjct: 502 ESQFRLTYGMILNLM-RVE-DLRVEDMLARSFAEFHAQRSVGDRRGALALDVAALKRVNE 559

Query: 553 LEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
           L     + D +G A    +      +     ++ + +         +  GRL+ +  GG 
Sbjct: 560 LAAAEEAADPTGWAAAVAHESASAAVRAAAAEVRAAVLTSRGGQSAMSIGRLLLIAGGGE 619

Query: 613 DWGWGVVVNVVKKPSAGVGTLP 634
           D               GVG LP
Sbjct: 620 D---------------GVGDLP 626



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 161/286 (56%), Gaps = 11/286 (3%)

Query: 676  VQELESRFPQGLPK-LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCF 734
            + E+E     G P  L+PVKD+K++D   V+  +    L   + A P   S    ++R +
Sbjct: 747  LSEIERVLSNGTPAALHPVKDLKLQDLAAVEACHAHARL---VAAVPALPSSVAPRLRAW 803

Query: 735  Q-----RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAA 789
                  R+A ++  +++L+  + D+ +Q+  D  + R  VL+ +G++D D  V LKGR A
Sbjct: 804  HALLDARRA-LSKRVEELEHGLSDANLQQMPD-FETRVEVLQSMGYLDEDRTVTLKGRVA 861

Query: 790  CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQE 849
            C I TGDEL+ TE++F G   ++   +  AL +  +  +K+S    L   L +  +  ++
Sbjct: 862  CEIATGDELVGTEIIFAGVLTNISPEEAVALLAALVFQEKNSSPPELHGSLLEACENAKQ 921

Query: 850  SARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRS 909
             A    E Q    L V  DE+V +T+R  L +V++ W+KG  F ++ Q+TD+ EGSI+R+
Sbjct: 922  LAFAAGEEQLRRGLPVAPDEFVTATLRFGLTEVVHEWAKGTKFGDICQITDVQEGSIVRT 981

Query: 910  ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
              RLDE    +R AA+ +G+  L +K  +AS +++R I+FS SLY+
Sbjct: 982  IVRLDEMCRDVRNAARIMGDSALYEKMESASTAIKRDIIFSASLYV 1027


>gi|449673879|ref|XP_002159474.2| PREDICTED: helicase SKI2W-like [Hydra magnipapillata]
          Length = 1379

 Score =  394 bits (1012), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 219/581 (37%), Positives = 341/581 (58%), Gaps = 27/581 (4%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  + FELD FQ+ ++  LE++E++LV+AHTSAGKT VAEYAIA+A +  ++ IYTSP
Sbjct: 423 DMAFKFPFELDVFQKRAILHLEKHENILVAAHTSAGKTVVAEYAIALAQKHMRKAIYTSP 482

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F +VGL+TGDV + P A+CL+MTTEILR MLY GS+V+++V WVI
Sbjct: 483 IKALSNQKFRDFRDTFPEVGLLTGDVQIKPEATCLIMTTEILRSMLYNGSDVIRDVEWVI 542

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDEIHY+ D E      + ++      +M  L +T        +      ++  +VV T 
Sbjct: 543 FDEIHYINDLEMLASTTDHLVVPVYGTEMPLLDST-------KQCFRKTKQKEVYVVQTK 595

Query: 248 FRPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
            RP PL+HY++  G S      L+ ++D+K  F    +    +   K++   + +     
Sbjct: 596 MRPVPLEHYLY-TGNSNKTSNELFCILDQKGNFLLSGYRAALNA--KKERASKVDESYGP 652

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
             + +G   +  S    ++ M+ ++   PV+ F+ S+++C+Q+A  +S ++  T  E+  
Sbjct: 653 KGVRQGNPQADKSVWLSLLSMLQKKDQLPVVAFTLSKKKCDQNAEKVSSVELVTSTERSH 712

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +   F  ++  L   DR LP +  +  LLK GI VHHSG+LP++KE+VE+LF  GL+K L
Sbjct: 713 IISFFNKSLRQLKGSDRQLPQVLWLEELLKNGIGVHHSGILPILKEIVEMLFSRGLLKIL 772

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPA+TVVF + +K+DG++ R + S EYIQM+GRAGRRG D+ G+ I++ 
Sbjct: 773 FATETFAMGVNMPARTVVFDSTRKFDGNNFRDLHSSEYIQMAGRAGRRGLDNTGMVILLC 832

Query: 483 DEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
              + E + L  M+LG P  L S FRL+YY ILNL+     Q T + ++K SF ++  +K
Sbjct: 833 KGDVPETSDLNKMMLGTPTKLTSQFRLTYYMILNLLRVK--QLTVQDMMKRSFSEYYLQK 890

Query: 542 ALPDIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
             P+  KK+ +L  +   L          ++  Y+    +  QL+K++ + +    +   
Sbjct: 891 DAPENEKKLEELRIKCKQLKDIDCPVCSIDLKAYYLAWTECYQLQKQIKNILFSSMQCQK 950

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG 638
            L  GRL+ V          V++ +      G+G L S  G
Sbjct: 951 LLVPGRLLLVTNANHKRSLSVILQI-----GGLGNLSSFKG 986



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 154/301 (51%), Gaps = 12/301 (3%)

Query: 661  PDLRPLDARQSILLAVQEL----ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
            P  R     QS ++A Q+L    +    +  P ++P+ D+ + + + V+   + E +   
Sbjct: 1082 PRFRSDPPSQSTVIAGQQLFNLAKDFNDKVCPVMHPIHDLCLNEIKFVEKHKKFERILPS 1141

Query: 717  LFAHPLNKSQDENQIRCF---QRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKL 773
            L  H  N     N I+ F   Q   +V  ++  L+ ++ D  +     E   R  VLK L
Sbjct: 1142 L--HCFNCLDCPNIIKHFSLMQSNMQVKEDVAMLEFRLSDENLN-LMQEYNQRIEVLKTL 1198

Query: 774  GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ 833
             +ID +  +Q KGR A  I T  E+++TEL+ N    DL   ++ A+ SCF+   K S  
Sbjct: 1199 NYIDKEMNLQHKGRVAFEISTH-EVMITELLINNVLTDLHPSEIVAVLSCFVFEQKKSSP 1257

Query: 834  INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
              L   L K +  +++ A+ +A  Q +  L V V+E++E  +   L++V+Y W++G +F 
Sbjct: 1258 PTLTDNLQKVVNTVKQIAKTVAVCQKKQGLNVTVEEFIEE-LHFGLVEVVYEWARGMSFK 1316

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            +++ +TD+ EG+I+R  +RLDE    +R AA  +G   L  K       +RR ++F+ SL
Sbjct: 1317 DIMNLTDVSEGNIVRCIQRLDETCRDVRKAAHVIGVQALCDKMEEGMSLIRRDVVFAASL 1376

Query: 954  Y 954
            Y
Sbjct: 1377 Y 1377


>gi|146175019|ref|XP_001019542.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
 gi|146144763|gb|EAR99297.2| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
           SB210]
          Length = 1392

 Score =  392 bits (1007), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 209/524 (39%), Positives = 319/524 (60%), Gaps = 53/524 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y FELD FQ+ S+  LE  ++V V AHTSAGKT VAEY+IA+A + K++ IYTSP+
Sbjct: 394 MAIQYPFELDNFQKRSILRLEEGQNVFVCAHTSAGKTVVAEYSIALAKKLKRKAIYTSPI 453

Query: 129 KALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           KALSNQKYR+  ++F  DVG++TGDV+L+P ASCL++TTE+LR MLY+G ++++++AWVI
Sbjct: 454 KALSNQKYRDFKEKFGDDVGIITGDVSLNPTASCLIVTTEVLRNMLYKGHDIVRDIAWVI 513

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ +++RGVVWEE+II LP  I +V LSAT+ N   FA W+    ++  +V  T 
Sbjct: 514 FDEVHYVNNQDRGVVWEETIILLPEYIGLVMLSATVPNHMDFANWVGRTKQRKIYVQKTL 573

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR----------- 296
            RP PL+H ++  G   ++++    E F ++N+ K+ + ++K++   ++           
Sbjct: 574 HRPVPLEHSIYYDG--KIFIIKSANEGFNQENYQKI-NKYIKEQESNKKNIVNAKDKLKQ 630

Query: 297 --------------ENGKASGRMAK-------------GGSG--SGGSDIFKIVKMIMER 327
                         +N KA  +  +             GG+G  +    +  ++K   + 
Sbjct: 631 EKKDKEIYKNTNLSQNAKAKQKFIQEKFIKQSNKTNKSGGNGPLTEAQQVKNVLKYCQKN 690

Query: 328 KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
           +  P +VF+FS+   +Q + S+  L+  + EE   +E+ F  A   L   D  +  I  +
Sbjct: 691 ELLPCVVFAFSKNIIKQLSESLGNLNLISHEESKQIEEFFNKASHKLKPRDLEVHQIRTL 750

Query: 388 LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
             L+ RGIAVHHS ++P IKE+VE+LF +GL+K LFATETFAMG+NMP KTV+F +VKK+
Sbjct: 751 KDLMMRGIAVHHSDVIPFIKEVVEILFSKGLIKVLFATETFAMGINMPTKTVIFYSVKKF 810

Query: 448 DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE------QMEMNTLKDMVLGKPAP 501
           D    R + S EY QMSGRAGRRG D +G  II+V E      +ME+  + D  + +   
Sbjct: 811 DSSQLRILNSSEYTQMSGRAGRRGLDLKGNVIILVTEPKRLPSKMELTKILDHKVEQIGE 870

Query: 502 LVST-FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
           ++S+ F+++Y  I+ L+S  E   T   ++K S+ +      LP
Sbjct: 871 MLSSKFKITYELIMKLLSSRELDVT--EMMKKSYSENDKYSQLP 912



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 23/208 (11%)

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R  +LK+L +ID D + Q+K R A  I+    + V+EL+  G F++LD  ++AA+   F+
Sbjct: 1185 RLNLLKQLNYIDEDNLPQIKARLAKEIEN---IYVSELIVQGIFDELDEAEIAAILIGFV 1241

Query: 826  PVDKSSEQ------------------INLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
               K  E                   IN      K  + L +  +   EI NE  +   +
Sbjct: 1242 TQCKKKENESDYDPSKDYENHGFQYSINFFDAYTKTKEILLQVIQ--LEIDNEIIIVGKI 1299

Query: 868  DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
            +E +     P LM V Y W +G  F  V  +TD+ EG+IIRS  RLD  +  ++ +AQ +
Sbjct: 1300 EEALSEIFSPELMKVAYEWIQGKDFLHVTLLTDVQEGTIIRSMLRLDNLMKNIKNSAQYI 1359

Query: 928  GEVNLEKKFAAASESLRRGIMFSNSLYL 955
            G  +L  K  +  E +RR I+F+ SLYL
Sbjct: 1360 GNNSLSLKIESCQEKMRRDIIFAQSLYL 1387


>gi|118372692|ref|XP_001019541.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
 gi|89301308|gb|EAR99296.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
           SB210]
          Length = 1383

 Score =  390 bits (1002), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/535 (38%), Positives = 328/535 (61%), Gaps = 53/535 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y FELD FQ+ S+  LE  ++V V AHTSAGKT VAEY+IA+A + K++ IYTSP+
Sbjct: 385 MAIQYPFELDSFQKRSILRLEEGQNVFVCAHTSAGKTVVAEYSIALAKKHKRKAIYTSPI 444

Query: 129 KALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           KALSNQKYR+  ++F  DVG++TGDV+L+P AS L++TTE+LR MLY+G +++++VAWVI
Sbjct: 445 KALSNQKYRDFKKKFGDDVGIITGDVSLNPTASYLIVTTEVLRNMLYKGHDIVRDVAWVI 504

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ +++RG VWEE+II LP  I +V LSAT+ N   FA W+    ++  +V  T 
Sbjct: 505 FDEVHYVNNQDRGGVWEETIILLPEYIGLVMLSATVHNYMDFANWVGKTKQRKIYVEKTL 564

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR----------- 296
            RP PL+H ++  G   ++++  + E F ++N+ K+ + ++K++   ++           
Sbjct: 565 HRPVPLEHSIYYDGK--IFIIKSDNEGFNQENYEKI-NKYIKEQESNKKKIVNAKDKLKQ 621

Query: 297 --------------ENGKASGRMAK-------------GGSG--SGGSDIFKIVKMIMER 327
                         +N KA  +  +             GG+G  +    +  ++K   + 
Sbjct: 622 EKKDKEIYKNTNLSQNAKAKQKFIQEIFIKQSKKTNLSGGNGPLTEAQQVKNVLKYCQKN 681

Query: 328 KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
           +  P +VF+FS+   +Q + S+  L+  + EE   +E+ F  A   L  +D  +  I  +
Sbjct: 682 ELLPCVVFAFSKNIIKQLSESLGNLNLISHEESKQIEEFFNKASQKLKSKDLEVHQIRTL 741

Query: 388 LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
             L+ RGIAVHHSG++P IKE+VE+LF +GL+K LFATETFA+G+NMP KTV+F ++KK+
Sbjct: 742 KDLMMRGIAVHHSGVIPFIKEIVEILFSKGLIKVLFATETFAIGINMPTKTVIFYSLKKF 801

Query: 448 DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE------QMEMNTLKDMVLGKPAP 501
           D   +R + S EY QMSGRAGRRG D +G  II+V E      +ME+  + D  + +   
Sbjct: 802 DSSQYRILNSSEYTQMSGRAGRRGLDLKGNVIILVTEPKRLPSKMELTQILDHKVEQIGE 861

Query: 502 LVST-FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE 555
           ++S+ F+++Y  I+ L+S  E   T   ++K S+ +      LP   K++ ++++
Sbjct: 862 MLSSKFKITYELIMKLLSSRELDVT--EMMKKSYSENDKYSQLPLNLKRIQEIQK 914



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 100/206 (48%), Gaps = 19/206 (9%)

Query: 766  RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
            R  +LK+L + D D + QLK R A  ID    + V+EL+  G F++LD  +V A+   F+
Sbjct: 1176 RLNLLKQLNYFDEDDLPQLKTRFAKEIDN---IYVSELIVQGIFDELDEAEVVAILIGFV 1232

Query: 826  PV--------------DKSSEQINLRMELAKPLQQLQESARKIA--EIQNECKLEVNVDE 869
                            D  +      +       + +E   KI   EI NE  +   ++E
Sbjct: 1233 TQYNKKYNESDYDPSEDYENHGFQYSLNFFDAYTKTKEILNKIIQLEIDNEIIIVGKIEE 1292

Query: 870  YVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
             +     P LM V Y W +G  F +V  +TD+ EGSII S  RLD  L  ++ +AQ +G 
Sbjct: 1293 ALSEIFSPQLMKVAYEWVRGKDFLQVSLLTDVEEGSIILSMLRLDNLLKNIKNSAQYIGN 1352

Query: 930  VNLEKKFAAASESLRRGIMFSNSLYL 955
             +L  K  +  E +RR I+F+ SLYL
Sbjct: 1353 NSLSLKIESCQEKMRRDIIFAQSLYL 1378


>gi|308799155|ref|XP_003074358.1| putative Helicase SKI2W (ISS) [Ostreococcus tauri]
 gi|116000529|emb|CAL50209.1| putative Helicase SKI2W (ISS) [Ostreococcus tauri]
          Length = 1701

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 209/519 (40%), Positives = 310/519 (59%), Gaps = 45/519 (8%)

Query: 68   EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
            E A  + FELD FQ+ ++  LE++E+V V+AHTSAGKT VAEYA A+A +   R IYTSP
Sbjct: 681  EPAHDFPFELDEFQKEAIVHLEKSENVFVAAHTSAGKTVVAEYAFALATKHCTRAIYTSP 740

Query: 128  LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
            +K +SNQK+R+   +F DVGL+TGDV + P A+CL+MTTEILR MLYRG++++++V WVI
Sbjct: 741  IKTISNQKFRDFGSKF-DVGLLTGDVQIRPEAACLIMTTEILRSMLYRGADLIRDVEWVI 799

Query: 188  FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
            FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA+W+    ++   V  T 
Sbjct: 800  FDEVHYVNDAERGVVWEEVIIMLPAHVGLILLSATVPNVFEFADWVGRTKRKKIFVTSTK 859

Query: 248  FRPTPLQHYVFPVGGSGL--YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG------ 299
             RP PL+H ++  GG     +  V E E F    +    + F K+++G +   G      
Sbjct: 860  KRPVPLEHCIY-FGGDKEKDFYKVGEHEAFLPSGYKIASEAFKKKQLGTKAATGTPANAQ 918

Query: 300  ---KASGRMAKG-----------------------GSGSG---GSD---IFKIVKMIMER 327
               + +GR  +G                       GS SG   G D     ++++ +  R
Sbjct: 919  AAKQVAGRGGRGVTQPGRGGRAGGRSGTPNVSAGRGSSSGPNAGRDKNMWVELIRNLERR 978

Query: 328  KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
               P+++F+FS++ C+    S++ +D  +  EK  +    + A+  L+  DR LP +  +
Sbjct: 979  DLLPMVIFAFSKKRCDTLVDSLTSMDLTSSSEKHEIHIFCERALSRLSAPDRKLPQVLRV 1038

Query: 388  LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
              LL+RG+ VHH+GLLP++KE+VE+LF  GL+K L+ TETFAMG+N PA+ V F +++K 
Sbjct: 1039 RELLRRGLGVHHAGLLPIVKEIVEMLFCRGLLKVLYCTETFAMGVNAPARCVCFQSLRKH 1098

Query: 448  DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN-TLKDMVLGKPAPLVSTF 506
            DG   R + +GEY QM+GRAGRRG D  G  I+   +       L+ ++ G+   L S F
Sbjct: 1099 DGQDFRGLLTGEYTQMAGRAGRRGLDTVGTVILAAWDNFPQELELRQLLSGQATKLQSQF 1158

Query: 507  RLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
            RL+Y  ILNLM R E     E ++  SF +F  +++  D
Sbjct: 1159 RLTYGMILNLM-RVE-DLRVEDMLARSFAEFHAQRSSID 1195



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 158/284 (55%), Gaps = 4/284 (1%)

Query: 673  LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIR 732
            LLA+++L +    G   L+P+KD+KI D   V+      +L       P   +Q   +  
Sbjct: 1417 LLALEKLSNESVFG--ALHPLKDLKIADIVAVEACQHHFDLVKDAPPKPTASAQKLREWS 1474

Query: 733  CFQRKAEV-NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
               R   +    +  L+  + D+ +Q+  D  + R  VL+++G++D +  + LKGR AC 
Sbjct: 1475 ALLRAKHILTWRVSDLEFGLSDANLQQMPD-FEARVAVLQRMGYLDENRTITLKGRVACE 1533

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
            I TGDEL+ TE++F G   D+   +  AL +  +  +K++   +L   L +  ++ +E A
Sbjct: 1534 ISTGDELVGTEIIFAGVLGDIPFEEAVALLAALVFQEKNASPPSLEGSLKEACERAKELA 1593

Query: 852  RKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
                E+Q    +++  DE+VE+T+   L +V+Y W++G  FA++ ++TD+ EGS++R+  
Sbjct: 1594 FAAGELQLAHGIQIAPDEFVETTMNFGLSEVVYEWARGTQFADICRLTDVQEGSVVRTIV 1653

Query: 912  RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            RLDE    +R AA+ +G+  L  K   AS +++R I+FS SLY+
Sbjct: 1654 RLDEMCRDVRNAARIMGDSTLYAKMEEASTAIKRDIVFSASLYI 1697


>gi|154272421|ref|XP_001537063.1| antiviral helicase SKI2 [Ajellomyces capsulatus NAm1]
 gi|150409050|gb|EDN04506.1| antiviral helicase SKI2 [Ajellomyces capsulatus NAm1]
          Length = 1298

 Score =  388 bits (997), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/546 (39%), Positives = 302/546 (55%), Gaps = 91/546 (16%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA+ + FELD FQ+ +V  LE  +SV V+AHTSAGKT VAEYAIA+A +   + IYTSP
Sbjct: 336 DMAREWPFELDTFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSP 395

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +KALSNQK+R+    F+DVG++TGDV ++P ASCL+MTTEILR MLYRG++++++V +VI
Sbjct: 396 IKALSNQKFRDFRNTFEDVGILTGDVQINPEASCLIMTTEILRSMLYRGADLIRDVEFVI 455

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  + ++ LSAT+ N  +FA W+    K+  +V+ T 
Sbjct: 456 FDEVHYVNDLERGVVWEEVIIMLPEHVTLILLSATVPNTYEFASWVGRTKKKDIYVISTP 515

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFRE------DNFVKLQDTFLKQKIGGRREN--- 298
            RP PL+HY++      ++ +VD  + F E      D+ +  +D    QK    + N   
Sbjct: 516 KRPVPLEHYLW--ADKSMHKIVDSNKNFIEKGWKKVDDILSGRDKLRTQKATDAQSNNSR 573

Query: 299 --------------GKASGRMAKGGSGSGGSD---------------------------- 316
                         G   G   +GG+  GG                              
Sbjct: 574 GGHGDRGRGGQAQRGNQRGGPQRGGTQRGGVQQQRGCTQQRGRGQPAPHRTGNIARTGRG 633

Query: 317 ------------IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                          +V+ + +    P  VF FS++ CE++A S+S  DF T  EK ++ 
Sbjct: 634 GGRTTVAQDRNVWVHLVQHLRKENLLPACVFVFSKKRCEENADSLSNQDFCTAAEKSSIH 693

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            + + ++  L  EDR LP I  +  LL RGI VHH GLLP+IKE+VE+LF + LVK LFA
Sbjct: 694 MIIEKSLARLKAEDRVLPQIRRVRELLSRGIGVHHGGLLPIIKEIVEILFAKTLVKVLFA 753

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TETFAMGLN+P +TVVF+  +K DG S R +  GEY QM+GRAGRRG D  G  II+   
Sbjct: 754 TETFAMGLNLPTRTVVFSGFRKHDGRSFRDLLPGEYTQMAGRAGRRGLDTVGSVIIVTSG 813

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
           + E            AP   T R +                 E +IK SF +   +  LP
Sbjct: 814 RDE------------APPAGTLRQA--------------LKIEEMIKRSFSENATQALLP 847

Query: 545 DIGKKV 550
           +  K+V
Sbjct: 848 EHQKQV 853



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 148/270 (54%), Gaps = 20/270 (7%)

Query: 697  KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRC--FQRKAEVNHE-------IQQL 747
            +++D +VV+++NQ +          +   +  N +RC  F +  E+ H+       I QL
Sbjct: 1038 RVKDLQVVEILNQRQA--------QVVIIESSNCLRCPQFLKHFEMQHDEWQVKENISQL 1089

Query: 748  KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
            K  M D  +Q   D  + R  VLK LG +D    VQLKG+ AC I + DEL++TEL+   
Sbjct: 1090 KQLMSDQNLQLLPD-YEQRILVLKDLGFVDEACRVQLKGKVACEIHSADELVLTELILEN 1148

Query: 808  TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
             F + +  ++ AL S F+  +K+     L   L K  + + + + ++ + Q + ++ ++ 
Sbjct: 1149 VFAEYEPEEIVALLSAFVFQEKTESVPTLTPRLEKGKEAIIKISERVNDFQIQHQVILSS 1208

Query: 868  DEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
            D+  +   +P   L++V+Y W++G +F  +  +TD+ EG+I+R   RLDE   ++++AA+
Sbjct: 1209 DDSNDFVSKPRFSLVEVVYEWARGMSFNRITDLTDVMEGTIVRVITRLDETCREVKSAAK 1268

Query: 926  AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             VG+  L  K   A E ++R ++F+ SLY+
Sbjct: 1269 LVGDPTLYNKTQQAQELIKRDVIFAASLYM 1298


>gi|186682114|ref|YP_001865310.1| DSH domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186464566|gb|ACC80367.1| DSH domain protein [Nostoc punctiforme PCC 73102]
          Length = 891

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 295/905 (32%), Positives = 470/905 (51%), Gaps = 89/905 (9%)

Query: 59  TFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
            +  P    ++   + F+LD FQ+ ++A L    SV+V A T +GKT V EYAI  A   
Sbjct: 2   NYPAPSPELDLGAIFPFDLDQFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALSR 61

Query: 119 KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
            +RV YT+PLKALSNQK R+  ++F    VGL+TGD ++  +A  LVMTTEI R MLY G
Sbjct: 62  GKRVFYTTPLKALSNQKLRDFREKFGFDQVGLLTGDASIHRDAPILVMTTEIFRNMLY-G 120

Query: 177 SEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFA 230
           + +      L +V  VI DE HYM DR+RG VWEESII+ P  +++  LSAT++N+ Q  
Sbjct: 121 TPIGQVGISLVDVEAVILDECHYMNDRQRGTVWEESIIYCPREVQLAALSATVANSDQLT 180

Query: 231 EWICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL- 288
           +W+  +H  P  ++Y+DFRP PL+ H+  P    GL+ +++       D+  K+    L 
Sbjct: 181 DWLNRVHG-PTDLIYSDFRPVPLEFHFCNP---KGLFPLLN-------DSKTKINPRLLQ 229

Query: 289 KQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS 348
           K+K GG R+ G+ SGR    G       I   +  + +R   P I F FSRR C++    
Sbjct: 230 KKKRGGERDRGR-SGRPEAPG-------IIYTLSQLEQRDMLPAIYFIFSRRGCDKAVAE 281

Query: 349 MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
           +  L     EE   + Q   + +    E  R+       +  L RGIA HH+G+LP  K 
Sbjct: 282 VGDLWLVNNEESQILRQQIDDFLARNPEAGRSG-----QIAPLYRGIAAHHAGILPAWKA 336

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           LVE LFQ+GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAG
Sbjct: 337 LVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDTGHRLLNASEFLQMAGRAG 396

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
           RRG D +G  + +            +   KP PLVS F  SY  +LNL+     + T E 
Sbjct: 397 RRGMDKQGHVVTVQTPFEGAKEAAYLGTSKPDPLVSQFTPSYGMVLNLLQTHTLEQTRE- 455

Query: 529 VIKNSFHQF--------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL--KLDI 578
           +I+ SF Q+        +Y++ + ++ K++++L E+ A++D   E E+A Y KL  +L +
Sbjct: 456 LIERSFGQYMATLHLRPEYDE-IAELEKQLAQLHEQIAAVD---ENELAIYEKLRQRLKV 511

Query: 579 AQLEKKLMSEITRPER------VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +   K + E  + +R      +L +  SG L+ ++         V   +V K S G G 
Sbjct: 512 ERQILKTLQEQAQEDRQEELGMMLDFAVSGTLLSLKGKNITVSSPVTAVLVGK-SPGSGQ 570

Query: 633 LP-----SRGGGYIVPVQ---LPLISTLSKIRLS---VPPDLRPLDARQSILLAVQELES 681
            P          + V      + L + L +I +S   +PP   PL   QS     +  E 
Sbjct: 571 APYLVCLGHDNRWYVATTGDVVDLYAELPRIEVSPDVLPPPEMPLKPGQS----RRGNEE 626

Query: 682 RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA--- 738
            F       NP++ + +  PEV + +++   ++ +L AHPL++S   N    F+R+A   
Sbjct: 627 TFAIATRIPNPIESLHLA-PEVAEQLSRTAAVQEQLEAHPLHQSG--NAATLFKRRAKYV 683

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
           E+  E++QL+ ++ + Q Q+  +E  N   +L+  G +D     QL GR A  I   +EL
Sbjct: 684 ELEAELEQLQGQV-EQQSQRHWEEFLNLILILQHFGALDNLVPTQL-GRIAAAIRGENEL 741

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +  +  +G  ++LD H +AA A+  +   P   S     L  E+A+ L +L+   R++ 
Sbjct: 742 WLGLVFASGELDNLDPHHLAAAAAGLVMETPRPDSKVNFELSNEVAEALAKLRGIRRQMF 801

Query: 856 EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
           ++Q    + + +    E      L+ ++  W+ G  + E+ + T + EG ++R  RR  +
Sbjct: 802 QLQRRYNVALPIWLEFE------LIAIVEQWALGMEWTELCENTTLDEGDVVRILRRTLD 855

Query: 916 FLNQL 920
            L+Q+
Sbjct: 856 LLSQI 860


>gi|449328929|gb|AGE95204.1| ATP-dependent RNA helicase [Encephalitozoon cuniculi]
          Length = 881

 Score =  387 bits (994), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/493 (41%), Positives = 291/493 (59%), Gaps = 29/493 (5%)

Query: 65  YNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIY 124
           Y  E      FE D FQR +   L R  SV VSAHTS+GKT VAEYAI+++     R IY
Sbjct: 53  YVDEKILNIGFEPDTFQRQAFYLLSRASSVFVSAHTSSGKTLVAEYAISLSQIHGTRTIY 112

Query: 125 TSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           TSP+KALSNQKY +  Q++ DVG++TGDV ++P A CLVMTTEILR ++YR  ++L++  
Sbjct: 113 TSPIKALSNQKYHDFKQKYDDVGIITGDVQVNPAAKCLVMTTEILRNLVYRNGDLLRDTE 172

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+FDE+HY+ D ERGVVWEE II +P  I  + LSAT+ N+ +F+EW+     +  +V+
Sbjct: 173 FVVFDEVHYINDSERGVVWEECIIMIPRHINFIMLSATIPNSLEFSEWVGRTKDKTIYVI 232

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
            T  R  PL+H ++      +Y + D                      GG+R      G 
Sbjct: 233 STSKRAVPLEHVIY--CDWCVYSIDDG---------------------GGKRNASNFKGD 269

Query: 305 M---AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
           +   +K    +G   I  +   ++++K  P I F FS+R+CE +A  +  L+ N  + ++
Sbjct: 270 LVPFSKKTRPTGKFKILDVANFVVKKKLTPAIFFCFSKRKCEDYAEILRTLNLNDTKSRE 329

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            V+     A  CL+ EDRNLP +  M  ++  G+AVHH  LLP +KE VELLF   LVK 
Sbjct: 330 EVKLFLSEATRCLSPEDRNLPQVLSMSSMVLNGVAVHHGSLLPFVKECVELLFSMNLVKL 389

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           L ATETFAMG+NMPAK  VF ++ K DG   RYI SGEYIQMSGRAGRRG D  G  +I 
Sbjct: 390 LIATETFAMGVNMPAKCCVFLSLSKIDGGVFRYISSGEYIQMSGRAGRRGMDAVGTVMIA 449

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
             +   ++T++ ++ GKP  L S FRLS+  IL  +         E +++ S+ + + ++
Sbjct: 450 DPKMPSLSTIQGIIHGKPFSLSSQFRLSFGLILISL---RSNIRVEDLMRRSYGEHRSQR 506

Query: 542 ALPDIGKKVSKLE 554
                 KK+S+LE
Sbjct: 507 NYERDMKKLSELE 519



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 105/198 (53%), Gaps = 16/198 (8%)

Query: 761 DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
           DE   R   LKK G ++   ++ +KGRAA  I T +E+LV E++F+  F  +D  ++ +L
Sbjct: 697 DEYNRRMEFLKKKGFVEE--MITIKGRAAAEIHTVNEVLVVEMIFSNEFRQMDGRKIVSL 754

Query: 821 ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-- 878
            S  I  +   +++          + L +  +++ E   E  L  ++DE +     P   
Sbjct: 755 MSSMIHEEADGQELG---------KALYDECKRMDECFRE--LSRDLDELMIPPFTPLNF 803

Query: 879 -LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            L+D +Y W  G++  +++   ++ EG+ +R   RL+E   +L + +  +G+ +LE+K  
Sbjct: 804 SLVDAVYDWCNGSSLGKIVSRYNVLEGTFVRLVLRLEECCRELISVSTMIGDKSLEEKIG 863

Query: 938 AASESLRRGIMFSNSLYL 955
            AS S++R I+F  +LYL
Sbjct: 864 DASASMKRDIIFLPTLYL 881


>gi|401826118|ref|XP_003887153.1| superfamily II RNA helicase [Encephalitozoon hellem ATCC 50504]
 gi|392998311|gb|AFM98172.1| superfamily II RNA helicase [Encephalitozoon hellem ATCC 50504]
          Length = 869

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/534 (40%), Positives = 306/534 (57%), Gaps = 56/534 (10%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           Y + K + I   ++  V  G +     FE D FQ+ +   L R  SV VSAHTS+GKT V
Sbjct: 26  YVMVKQDWIPSDYSQYVDEGIL--NIGFEADVFQKQAFYFLSRESSVFVSAHTSSGKTLV 83

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTE 167
           AEYAI+++ +   R IYTSP+KALSNQKY +  Q++ DVG++TGDV ++PNA CLVMTTE
Sbjct: 84  AEYAISLSQKRGTRTIYTSPIKALSNQKYHDFKQKYDDVGIITGDVQVNPNAKCLVMTTE 143

Query: 168 ILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNAT 227
           ILR ++YR  ++L++  +V+FDE+HY+ D ERGVVWEE II +P  I  + LSAT+ N+ 
Sbjct: 144 ILRNLVYRNGDLLRDTEFVVFDEVHYINDSERGVVWEECIIMIPRNISFIMLSATIPNSL 203

Query: 228 QFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
           +F+EW+     +  +V+ T  R  PL+H ++      +Y  +DE                
Sbjct: 204 EFSEWVGRTKNRTIYVISTSKRAVPLEHVIY--CDWNVY-SIDE---------------- 244

Query: 288 LKQKIGGRRENGKASGR-----MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRREC 342
                 G R  G ++ +      +K    +G   I  +   ++++K  P I F FS+++C
Sbjct: 245 ------GGRTKGASNFKGDLVPFSKKNRPTGRFKILDLANFVVKKKLTPSIFFCFSKKKC 298

Query: 343 EQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
           E +A  +  L+ N +  ++ V      A  CL+ EDRNLP I  M  ++  GIAVHH  L
Sbjct: 299 EDYAEILKTLNLNDERSREEVRTFLSEATKCLSPEDRNLPQILSMSSMVLNGIAVHHGSL 358

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LP +KE VELLF   LVK L ATETFAMG+NMPAK  VF ++ K D    RYI SGEYIQ
Sbjct: 359 LPFVKECVELLFSMNLVKLLIATETFAMGVNMPAKCCVFLSLSKIDNGVFRYISSGEYIQ 418

Query: 463 MSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSIL-------- 514
           MSGRAGRRG D  G  +I   +   ++T++ ++ G P  L S F+LS+  IL        
Sbjct: 419 MSGRAGRRGMDAVGTVVIADPKMPPLSTIRGIIHGTPFSLSSQFKLSFGLILISLRSNVK 478

Query: 515 --NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE-EEAASLDASGE 565
             +LM R+ G+  +         Q  YEK +    KK+S+LE +E    D  G+
Sbjct: 479 VEDLMRRSYGEHRS---------QRNYEKDM----KKLSELECDEDKVCDVCGD 519



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 114/216 (52%), Gaps = 17/216 (7%)

Query: 743 EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
           EI ++K K     +    DE   R   LK+ G +  +  + +KGRAA  I T +E+LV E
Sbjct: 668 EIDEIKIKYNVCSLGMI-DEYNKRMEFLKRKGFVGEE--ITIKGRAAAEIHTVNEVLVVE 724

Query: 803 LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
           ++F+  F ++D  ++ +L S  I  +++ EQ        +P + L    RK+ E      
Sbjct: 725 MIFSNEFREMDGRKIISLMSSMIH-EEADEQ--------EPGEALHNECRKMKEYF--AG 773

Query: 863 LEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
           L  +++E +     P    L+D +Y W  G++ A+++   ++ EG+ +R   RL+E   +
Sbjct: 774 LSRDLEELMIPPFAPLSFSLVDAVYEWCNGSSLAKIVSKYNVLEGTFVRLILRLEECCRE 833

Query: 920 LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           L A +  +G+  LE+K A AS S++R I+F  SLYL
Sbjct: 834 LIAVSTMIGDKTLEEKVADASASMKRDIIFLPSLYL 869


>gi|429963286|gb|ELA42830.1| hypothetical protein VICG_00145 [Vittaforma corneae ATCC 50505]
          Length = 635

 Score =  387 bits (993), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 203/482 (42%), Positives = 295/482 (61%), Gaps = 22/482 (4%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           +F+ D FQ+ +   L + ESV VSAHTS+GKT VAEYAI ++ +   RVIYTSP+KALSN
Sbjct: 49  NFKPDIFQKQAFYFLSKKESVFVSAHTSSGKTLVAEYAIGLSLKSSNRVIYTSPIKALSN 108

Query: 134 QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
           QK+ +  Q F DVGL+TGDV ++P+ASCL+MTTEILR ++Y+ SE+L    +V+FDE+HY
Sbjct: 109 QKFFDFKQRFPDVGLITGDVQVNPSASCLIMTTEILRNLVYKNSEILANTEYVVFDEVHY 168

Query: 194 MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
           + D ERGVVWEE II LP  I  V LSAT+ N+ +FAEW+     +  +V+ T+ R  PL
Sbjct: 169 INDAERGVVWEECIIMLPHHISFVMLSATIPNSLEFAEWVGRTKNRCIYVISTNKRAVPL 228

Query: 254 QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG 313
           +  ++    + ++ + D K +  E+     Q       +    +N KA+ R      G+ 
Sbjct: 229 EFAIY--CDASVFSIDDPKSKKAENQLSNFQ-----TALPVFNKNIKAANRFRINDLGN- 280

Query: 314 GSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
                     +  +   P I F+FS++ C  +  S+  LD  T +EK+ + +  +NA+  
Sbjct: 281 ---------FVNNKGLVPAIFFTFSKKACVGYGRSLQLLDLTTPDEKECILKFLENAMGS 331

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L +EDR+LP I  M   + RG+A+HH  LLP +KE VE+LF E L+K L ATETFAMG+N
Sbjct: 332 LRDEDRDLPQIRSMRDQVYRGVAIHHGALLPFVKECVEILFSENLIKILVATETFAMGVN 391

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKD 493
           MPAK   F ++ K D    RY+ +GE+IQMSGRAGRRG D  G  +I      +++T+K 
Sbjct: 392 MPAKCCAFLSLTKIDNGVFRYLNAGEFIQMSGRAGRRGMDKVGTVLIADQRVSDISTIKK 451

Query: 494 MVLGKPAPLVSTFRLSYYSILN-LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
           ++ G PA L S FRLS+  IL  +M+  E     E ++K+SF +   ++ L     +++ 
Sbjct: 452 VINGIPADLNSKFRLSFSLILTAIMTNIE----VEELMKSSFKEHGSQRTLKTDMARLAV 507

Query: 553 LE 554
           LE
Sbjct: 508 LE 509


>gi|392512621|emb|CAD25317.2| ATP-DEPENDENT RNA HELICASE (SKI2 FAMILY) [Encephalitozoon cuniculi
           GB-M1]
          Length = 869

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/514 (40%), Positives = 296/514 (57%), Gaps = 43/514 (8%)

Query: 44  VPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAG 103
           +PS YA   DE I                  FE D FQR +   L R  SV VSAHTS+G
Sbjct: 34  LPSDYAQYVDEKILNI--------------GFEPDTFQRQAFYLLSRASSVFVSAHTSSG 79

Query: 104 KTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLV 163
           KT VAEYAI+++     R IYTSP+KALSNQKY +  Q++ DVG++TGDV ++P A CLV
Sbjct: 80  KTLVAEYAISLSQIHGTRTIYTSPIKALSNQKYHDFKQKYDDVGIITGDVQVNPAAKCLV 139

Query: 164 MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATM 223
           MTTEILR ++YR  ++L++  +V+FDE+HY+ D ERGVVWEE II +P  I  + LSAT+
Sbjct: 140 MTTEILRNLVYRNGDLLRDTEFVVFDEVHYINDSERGVVWEECIIMIPRHINFIMLSATI 199

Query: 224 SNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL 283
            N+ +F+EW+     +  +V+ T  R  PL+H ++      +Y + D             
Sbjct: 200 PNSLEFSEWVGRTKDKTIYVISTSKRAVPLEHVIY--CDWCVYSIDDG------------ 245

Query: 284 QDTFLKQKIGGRRENGKASGRM---AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
                    GG+R      G +   +K    +G   I  +   ++++K  P I F FS+R
Sbjct: 246 ---------GGKRNASNFKGDLVPFSKKTRPTGKFKILDVANFVVKKKLTPAIFFCFSKR 296

Query: 341 ECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
           +CE +A  +  L+ N  + ++ V+     A  CL+ EDRNLP +  M  ++  G+AVHH 
Sbjct: 297 KCEDYAEILRTLNLNDTKSREEVKLFLSEATRCLSPEDRNLPQVLSMSSMVLNGVAVHHG 356

Query: 401 GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
            LLP +KE VELLF   LVK L ATETFAMG+NMPAK  VF ++ K DG   RYI SGEY
Sbjct: 357 SLLPFVKECVELLFSMNLVKLLIATETFAMGVNMPAKCCVFLSLSKIDGGVFRYISSGEY 416

Query: 461 IQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           IQMSGRAGRRG D  G  +I   +   ++T++ ++ G P  L S FRLS+  IL  +   
Sbjct: 417 IQMSGRAGRRGMDAVGTVMIADPKMPSLSTIQGIIHGTPFSLSSQFRLSFGLILISL--- 473

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
                 E +++ S+ + + ++      KK+S+LE
Sbjct: 474 RSNIRVEDLMRRSYGEHRSQRNYERDMKKLSELE 507



 Score = 93.6 bits (231), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 16/198 (8%)

Query: 761 DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
           DE   R   LKK G ++   ++ +KGRAA  I T +E+LV E++F+  F  +D  ++ +L
Sbjct: 685 DEYNRRMEFLKKKGFVEE--MITIKGRAAAEIHTVNEVLVVEMIFSNEFRQMDGRKIVSL 742

Query: 821 ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-- 878
            S  I  +   +++          + L +  +++ E   E  L  ++DE +     P   
Sbjct: 743 MSSMIHEEADGQELG---------KALYDECKRMDECFRE--LSRDLDELMIPPFTPLNF 791

Query: 879 -LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            L+D +Y W  G++  +++   ++ EG+ +R   RL+E   +L + +  +G+ +LE+K  
Sbjct: 792 SLVDAVYDWCNGSSLGKIVSRYNVLEGTFVRLVLRLEECCRELISVSTMIGDKSLEEKIG 851

Query: 938 AASESLRRGIMFSNSLYL 955
            AS S++R I+F  SLYL
Sbjct: 852 DASASMKRDIIFLPSLYL 869


>gi|19074207|ref|NP_584813.1| ATP-DEPENDENT RNA HELICASE (SKI2 FAMILY) [Encephalitozoon cuniculi
           GB-M1]
          Length = 881

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 210/514 (40%), Positives = 296/514 (57%), Gaps = 43/514 (8%)

Query: 44  VPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAG 103
           +PS YA   DE I                  FE D FQR +   L R  SV VSAHTS+G
Sbjct: 46  LPSDYAQYVDEKILNI--------------GFEPDTFQRQAFYLLSRASSVFVSAHTSSG 91

Query: 104 KTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLV 163
           KT VAEYAI+++     R IYTSP+KALSNQKY +  Q++ DVG++TGDV ++P A CLV
Sbjct: 92  KTLVAEYAISLSQIHGTRTIYTSPIKALSNQKYHDFKQKYDDVGIITGDVQVNPAAKCLV 151

Query: 164 MTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATM 223
           MTTEILR ++YR  ++L++  +V+FDE+HY+ D ERGVVWEE II +P  I  + LSAT+
Sbjct: 152 MTTEILRNLVYRNGDLLRDTEFVVFDEVHYINDSERGVVWEECIIMIPRHINFIMLSATI 211

Query: 224 SNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL 283
            N+ +F+EW+     +  +V+ T  R  PL+H ++      +Y + D             
Sbjct: 212 PNSLEFSEWVGRTKDKTIYVISTSKRAVPLEHVIY--CDWCVYSIDDG------------ 257

Query: 284 QDTFLKQKIGGRRENGKASGRM---AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
                    GG+R      G +   +K    +G   I  +   ++++K  P I F FS+R
Sbjct: 258 ---------GGKRNASNFKGDLVPFSKKTRPTGKFKILDVANFVVKKKLTPAIFFCFSKR 308

Query: 341 ECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
           +CE +A  +  L+ N  + ++ V+     A  CL+ EDRNLP +  M  ++  G+AVHH 
Sbjct: 309 KCEDYAEILRTLNLNDTKSREEVKLFLSEATRCLSPEDRNLPQVLSMSSMVLNGVAVHHG 368

Query: 401 GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
            LLP +KE VELLF   LVK L ATETFAMG+NMPAK  VF ++ K DG   RYI SGEY
Sbjct: 369 SLLPFVKECVELLFSMNLVKLLIATETFAMGVNMPAKCCVFLSLSKIDGGVFRYISSGEY 428

Query: 461 IQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
           IQMSGRAGRRG D  G  +I   +   ++T++ ++ G P  L S FRLS+  IL  +   
Sbjct: 429 IQMSGRAGRRGMDAVGTVMIADPKMPSLSTIQGIIHGTPFSLSSQFRLSFGLILISL--- 485

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
                 E +++ S+ + + ++      KK+S+LE
Sbjct: 486 RSNIRVEDLMRRSYGEHRSQRNYERDMKKLSELE 519



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 105/198 (53%), Gaps = 16/198 (8%)

Query: 761 DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
           DE   R   LKK G ++   ++ +KGRAA  I T +E+LV E++F+  F  +D  ++ +L
Sbjct: 697 DEYNRRMEFLKKKGFVEE--MITIKGRAAAEIHTVNEVLVVEMIFSNEFRQMDGRKIVSL 754

Query: 821 ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF-- 878
            S  I  +   +++          + L +  +++ E   E  L  ++DE +     P   
Sbjct: 755 MSSMIHEEADGQELG---------KALYDECKRMDECFRE--LSRDLDELMIPPFTPLNF 803

Query: 879 -LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            L+D +Y W  G++  +++   ++ EG+ +R   RL+E   +L + +  +G+ +LE+K  
Sbjct: 804 SLVDAVYDWCNGSSLGKIVSRYNVLEGTFVRLVLRLEECCRELISVSTMIGDKSLEEKIG 863

Query: 938 AASESLRRGIMFSNSLYL 955
            AS S++R I+F  SLYL
Sbjct: 864 DASASMKRDIIFLPSLYL 881


>gi|393907113|gb|EJD74520.1| hypothetical protein LOAG_18173 [Loa loa]
          Length = 1000

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 228/594 (38%), Positives = 325/594 (54%), Gaps = 84/594 (14%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y FELDPFQ+ +V CL+R +SV V+AHTSAGKT VAEYA+A+    K R IYTSP+
Sbjct: 1   MARKYPFELDPFQQQAVVCLDRGDSVFVAAHTSAGKTVVAEYAVALCSLHKTRAIYTSPI 60

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+RE    F+DVGL+TGD+ L P A CL+MTTE+LR MLY GSE+++E+ WVIF
Sbjct: 61  KALSNQKFREFKLIFEDVGLITGDIQLHPEAFCLIMTTEVLRSMLYNGSEIIRELEWVIF 120

Query: 189 DEIHYMKDRE------------------------------------RGVVWEESIIFLPP 212
           DE+HY+ D E                                    RG VWEE +I LP 
Sbjct: 121 DEVHYINDAERNNSDNREYSLNVNSTALIIVGTTVNKFVHAILSGTRGHVWEEVLIMLPA 180

Query: 213 AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSG-----LYL 267
             K+V LSAT+ N  +FA+W+  + K+  +V+ T  RP PL+H+++  G  G     ++ 
Sbjct: 181 HAKIVMLSATVPNCVEFADWVGRIKKKQIYVIMTARRPVPLEHFLY-TGQDGKTKKDMFK 239

Query: 268 VVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMER 327
           ++D   QF +  +        +  IG    N                   F    +I + 
Sbjct: 240 IIDSDGQFVQKGY--------QLDIGIHFMNL-----------------YFAYFALIDKN 274

Query: 328 KFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELM 387
            +  VI     +  C+ +A  +  +D  T++EK ++   F   +  L   D+ LP +  M
Sbjct: 275 VYITVIDHLRMQNICDDNAYLLRSVDLTTEKEKSSIHHFFSKCIARLRGSDKRLPQVLQM 334

Query: 388 LPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKW 447
             L K G A+HHSG+LP++KE+VELLFQ+GLVK LFATETFAMG+NMPA+TV+F +++K 
Sbjct: 335 KELCKHGFAIHHSGILPILKEVVELLFQKGLVKVLFATETFAMGVNMPARTVIFDSLQKH 394

Query: 448 DGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM-----VDEQMEMNTLKDMVLGKPAPL 502
           DG   R +  GEYIQM+GRAGRRG D  G  I++     V + +++        GKP  L
Sbjct: 395 DGRQLRMLNPGEYIQMAGRAGRRGLDATGTVIVLCKGPYVPDYLDLVNCMQSFQGKPTKL 454

Query: 503 VSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ-------FQYEKALPDIGKKVSKLEE 555
            S FR++Y  +LNL+ R E   + E V++ S+ +         ++  L ++ K +   E+
Sbjct: 455 ESRFRVTYSMLLNLL-RVE-YLSIEDVLRRSYVESASLRLALAHKARLKEVEKLLVSKED 512

Query: 556 E--AASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
               A       + V  Y  LK+   +   +L  E+ R   V   L  GRLI V
Sbjct: 513 PNCTACFPIESRSIVDYYENLKI-FLRSRAELWPELIRFSVVDKLLAPGRLIIV 565



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 112/201 (55%), Gaps = 16/201 (7%)

Query: 765 NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF 824
           +R ++L++L +ID   +V LKGR AC I    ELL+TELM +  F+     ++AA+ S  
Sbjct: 801 DRIKLLRRLNYIDDSNLVSLKGRVACEIH-HQELLITELMLDNKFHYRSTAEIAAMLSVT 859

Query: 825 IPVDKSSE---QINLRMELAKP---LQQLQ----ESARKIAEIQNECKL-EVNVDEYVES 873
               +S E   + +   E+ +P   L++L+    E   +I   Q EC + +V++ E +  
Sbjct: 860 TCQHRSREGDYRKDKEDEIVRPPPVLKELKDDIIEVCNRIGTFQRECGVKDVDISEELSF 919

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
                LM  +Y W+    FA+++Q+TD  EG I+R  +RLDE    +R AA+ VG+  L 
Sbjct: 920 D----LMHAVYEWANSMPFADIMQLTDAQEGLIVRCIQRLDELCRDIRNAARLVGDPALY 975

Query: 934 KKFAAASESLRRGIMFSNSLY 954
           +K    S +++R I+F+ SLY
Sbjct: 976 EKMDDTSAAIKRDIVFAASLY 996


>gi|428213983|ref|YP_007087127.1| superfamily II RNA helicase [Oscillatoria acuminata PCC 6304]
 gi|428002364|gb|AFY83207.1| superfamily II RNA helicase [Oscillatoria acuminata PCC 6304]
          Length = 900

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 289/917 (31%), Positives = 450/917 (49%), Gaps = 122/917 (13%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E    + F LD FQ  ++A LE   SV+V A T +GKT + EY I  A +   RV YT+P
Sbjct: 11  ESNNLFPFALDRFQHEAIAALEAGRSVVVCAPTGSGKTLIGEYTIHRALKRGGRVFYTTP 70

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS-----EVL 180
           LKALSNQK R+  Q+F  ++VGL+TGD++++ +A+ LVMTTEI R MLY  S       L
Sbjct: 71  LKALSNQKLRDFRQQFGEENVGLLTGDISINRDAAVLVMTTEIFRNMLYGTSIGAVGTSL 130

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
             V  V+ DE HYM DR+RG VWEESII+ PP I++V LSAT++NA Q  EWI  +H  P
Sbjct: 131 HGVEAVVLDECHYMNDRQRGTVWEESIIYCPPEIQLVALSATVANAGQLTEWISEVHG-P 189

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK 300
             ++Y+D+RP PL++Y       GL+ ++ + +            T + Q++      G+
Sbjct: 190 TELIYSDYRPVPLEYYF--CSAKGLFPLLSKDQ------------TKINQRLIKTPGKGR 235

Query: 301 ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
            S R   G        + +++  + E+   P I F FSRR C+     +S L   + +E 
Sbjct: 236 GSSRDEPG--------LIELLTHLHEKNMLPAIYFIFSRRRCDDAVTQVSDLSLVSPKEA 287

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             + +     +    E +R       + PLL RGIA HH+G+LP  K LVE LFQ GL+K
Sbjct: 288 AQLHKRVHEFLAKNPEAERT----GQLQPLL-RGIAAHHAGILPAWKGLVEELFQAGLIK 342

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            +FATET A G+NMPA+T V +++ K   D HR + + E++QMSGRAGRRG D+RG  + 
Sbjct: 343 VVFATETLAAGINMPARTTVISSLSKRTDDGHRLLKASEFLQMSGRAGRRGMDERGYVVT 402

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF--- 537
           +            +    P PLVS F  +Y  +LNL+     + T E ++++SF Q+   
Sbjct: 403 VQTRFEGAKEASYLATVGPDPLVSQFTPTYGMVLNLLQTHTLEETKE-LVESSFGQYLAT 461

Query: 538 -QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVL 596
              +  L DI K+  +L      L    E     Y KL+ D  ++EK+L+  +       
Sbjct: 462 LHLQPKLQDISKQTQELASLKQQLQGVDEDLCKGYQKLR-DRMKVEKQLLKTLEE----- 515

Query: 597 YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIV-------------- 642
             L S R I  +                 P+A  G L S  G +IV              
Sbjct: 516 QALESTRTIAAQ---------------ALPTAEPGQLLSLKGRHIVTKEPILAVLVAKAP 560

Query: 643 -PVQLPLISTLSKI-RLSVPPDLRPLDARQSILLAVQELESRFPQG-------------- 686
            P + P++  LS+  R  V   L  ++  +  L    + ES  P G              
Sbjct: 561 GPGKSPILVCLSQSNRWYVGTGLDVVELHEP-LPKWNQFESPIPPGELVLKPGQSRKGNE 619

Query: 687 ----LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVN 741
               + +L P++      PEVV+   +I  L+ +L  HPLN+       ++ F+R   + 
Sbjct: 620 DTAAIAQLIPLEVPTFYAPEVVEQEGRIAALQAQLKDHPLNQYGHPGTLVKHFKRYKRLE 679

Query: 742 HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI---------DADGVVQLK------G 786
            ++ ++K+K+ DS +    +E  +   +L+++G +         D D +  L       G
Sbjct: 680 SDLSKVKNKL-DSHLTAHWEEFLDLINILQQVGCLRQLETQTDGDEDAIENLTFEVTSLG 738

Query: 787 RAACLIDTGDELLVTELMFNGTFNDLDHHQVA-ALASCFIPVDKSSE--QINLRMELAKP 843
            +A  I   +EL +   + +G    L+ HQ A A A+    V +       NL  E+   
Sbjct: 739 ESAAAIRGDNELWLGLALMSGCLEWLEPHQFACACAALVTEVSRPDNWTNYNLSREVDGA 798

Query: 844 LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
           L QLQ   RK+ ++Q+  ++ + +  ++E      L+ ++  W+ G  + E+   T + E
Sbjct: 799 LSQLQGERRKLFQLQHRHRVTLPI--WLERQ----LIAIVEEWALGVEWTELCANTSLDE 852

Query: 904 GSIIRSARRLDEFLNQL 920
           G I+R  RR  +FL+Q+
Sbjct: 853 GDIVRMLRRTLDFLSQI 869


>gi|156084552|ref|XP_001609759.1| helicase with zinc finger motif protein [Babesia bovis T2Bo]
 gi|154797011|gb|EDO06191.1| helicase with zinc finger motif protein, putative [Babesia bovis]
          Length = 1113

 Score =  385 bits (988), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/514 (40%), Positives = 320/514 (62%), Gaps = 30/514 (5%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FELD FQ+ ++  L + + V V+AHTS+GKT VAEYAIA+A    ++ +YTSP+KALS
Sbjct: 205 YPFELDDFQKRAIYHLHKMKHVFVAAHTSSGKTVVAEYAIALALSRGKKAVYTSPIKALS 264

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQK+RE  + + +  VG++TGDV+ +PNA CL++TTEILR +LYRG  ++ ++  VIFDE
Sbjct: 265 NQKFREFTKRYGNETVGIITGDVSCNPNAPCLIVTTEILRNLLYRGDPIIGQLGVVIFDE 324

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ D +RGVVWEE  I LP +I++V LSAT+ N  +FA+WI  + ++    + T  RP
Sbjct: 325 VHYINDFQRGVVWEEVFIMLPKSIQLVMLSATVPNYAEFADWIGAIMEREVITIVTTRRP 384

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS 310
            PL H+++    + ++L++D K  F +D +  +       KI  + +         KG  
Sbjct: 385 VPLVHFMYIY--NRIFLLLDNKGVFNKDAYHNMY------KISSQNKGSSIKRTTFKG-- 434

Query: 311 GSGGSDIFKIVKMI----MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE-EKDTVEQ 365
                 + K+ ++I    M +K  PV++F FSR +CE +A  M  L+ N+   ++  +  
Sbjct: 435 -----QVQKLQRLIRHLEMTQKL-PVVLFCFSRAKCESYAREMPNLNLNSNHVQRSKIHI 488

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
             + ++  ++E+DR+L  ++ ++ LL RGI VHHSGLLP++KE+VE+LF  GL+K LFAT
Sbjct: 489 FLKESLSSISEDDRDLMQVKSIIKLLYRGIGVHHSGLLPLMKEIVEILFSRGLIKVLFAT 548

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMVDE 484
           ETFAMG+NMPA++V+FT++ K DG   R++ + EY QM+GRAGRRG D  G + I   D+
Sbjct: 549 ETFAMGVNMPARSVIFTSIHKHDGQKTRHLTASEYTQMAGRAGRRGLDSFGSVYIFCPDD 608

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
             ++  L  M+  K   L S FR++Y  +L + SR     T E ++K SF +    K +P
Sbjct: 609 PPDLQDLTTMMFEKSTKLESKFRITYNMLLQVHSREHMNIT-EMMLK-SFKETYKMKNIP 666

Query: 545 DIGKKVSKLEEEAASLDA----SGEAEVAEYHKL 574
              +   +  +E +++       GE  + EYHKL
Sbjct: 667 IFKRDNIRKRQELSTIPKVDCIYGEPSIEEYHKL 700



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 142/269 (52%), Gaps = 13/269 (4%)

Query: 694  KDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE-VNHEIQQLKSKMR 752
            K +K    +  D++ +  ++ H++  +P NK     +    Q + E   +E++++ S ++
Sbjct: 850  KQLKQTSIQFYDVMLKQRDIYHEISLNPCNKCHLREKHYSIQERVESCRNELERITSLLK 909

Query: 753  DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
            +  +  + DE+  +  VLK+L  +D +G   +KGR A  + TGDE+ +TE +     NDL
Sbjct: 910  EESLSSY-DEMVAKVEVLKQLDFLDENGKPTVKGRIATYLTTGDEITLTETITQNVLNDL 968

Query: 813  DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-----LEVNV 867
            +  + AA+ S F+  D+S E+     E+  P   +Q++   + ++ ++       L V V
Sbjct: 969  EPEECAAILSAFVHNDRSPEK-----EVPSPTAAIQKARDMVLDLHSKVDVVQRALNVVV 1023

Query: 868  DEYVESTVRPF-LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
                 S +  F L  VIY W+ G  F+E++Q TD+ EG I+R+  RLDE   ++   A  
Sbjct: 1024 SREDHSALCNFSLSYVIYQWAIGTPFSEIMQYTDLQEGHIVRAITRLDELCRKIGQVANI 1083

Query: 927  VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             G+  L+ K    S S++RGI+F  SLYL
Sbjct: 1084 NGDQALQSKIEKVSNSIKRGIVFMPSLYL 1112


>gi|324500847|gb|ADY40386.1| Helicase SKI2W [Ascaris suum]
          Length = 731

 Score =  384 bits (986), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/400 (47%), Positives = 265/400 (66%), Gaps = 14/400 (3%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA+ Y FELD FQ+ +V C+ER ESV V+AHTSAGKT VAEYA+A++   K RVIYTSP+
Sbjct: 340 MARKYPFELDSFQQQAVVCMERGESVFVAAHTSAGKTVVAEYAVALSNIHKTRVIYTSPI 399

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQK+R+    F DVGL+TGD+ L  +A  LVMTTE+LR MLY GSEV++E+ WVIF
Sbjct: 400 KALSNQKFRDFKLVFDDVGLITGDIQLHTDAFALVMTTEVLRSMLYNGSEVIRELEWVIF 459

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D ERG VWEE +I LP  +K+V LSAT+ N  +FA+W+  +  +  +VV T  
Sbjct: 460 DEVHYINDAERGHVWEEVLIMLPGHVKIVMLSATVPNCIEFADWVGRIKNRKINVVMTSR 519

Query: 249 RPTPLQHYVFPVGGSG-----LYLVVDEKEQFREDNFVKLQDTFLK-QKIGGRRENGKAS 302
           RP PL+HY++  G  G     L+ +VD   +F +  +  + D   K +KI        + 
Sbjct: 520 RPVPLEHYLY-TGQDGKTRKDLFKIVDSNGEFIQRGYSLVADAKSKLRKIS-------SG 571

Query: 303 GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT 362
            ++ +  S +  +    +++ +  +   P++VF FSRR C+++A  +  +D  T +EK  
Sbjct: 572 AKVYRPNSKTDKNIYINLIEHLRVQNLLPMVVFVFSRRRCDENAALLQSVDLTTAKEKSE 631

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +   F   +D L   D+ LP +  M  L KRG AVHHSG+LP++KE+VELLFQ+G VK L
Sbjct: 632 IHHFFSKCIDRLRGSDKKLPQVLQMAELCKRGFAVHHSGILPILKEVVELLFQKGYVKIL 691

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           FATETFAMG+NMPA+TVVF +++K DG   R +   EYIQ
Sbjct: 692 FATETFAMGVNMPARTVVFDSMQKHDGREMRTLSPSEYIQ 731


>gi|320534071|ref|ZP_08034614.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 171 str. F0337]
 gi|320133719|gb|EFW26124.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 171 str. F0337]
          Length = 986

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 291/968 (30%), Positives = 464/968 (47%), Gaps = 107/968 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LER E VLV+A T AGKT V E+A+ +      +  YT+P+KALS
Sbjct: 29  YDFPLDPFQEEACGALERGEGVLVAAPTGAGKTVVGEFAVHLGLVRGLKTFYTAPIKALS 88

Query: 133 NQKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           NQKY +L   H + + VGL+TGD +++P+A  +VMTTE+LR MLY GS  L  + +V+ D
Sbjct: 89  NQKYLDLVARHGQER-VGLLTGDTSVNPHADVVVMTTEVLRNMLYSGSRDLDRLGFVVMD 147

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ DR RG VWEE II LP  ++++ LSAT+SNA +F +W+  +  +   VV ++ R
Sbjct: 148 EVHYLADRFRGSVWEEVIIHLPAEVQVISLSATVSNAEEFGDWLGQVRGRTA-VVVSEER 206

Query: 250 PTPL-QH----------YVFPVGGSGLYLVVDEKEQFREDNFVK------LQDTFLKQKI 292
           P PL QH          Y  P   +     +D+ EQ   +   +      L    LK   
Sbjct: 207 PVPLTQHMMVGRRLLPLYSHPADPAEQSDQLDQSEQPELEQQAERTGQPPLNPELLKAVK 266

Query: 293 GGRRENGKASG--------------------RMAKGGS----GSGGSDI--------FKI 320
             RR      G                    R A+GG     G GG+           ++
Sbjct: 267 QARRAAASGGGSKNGYRGRGGDSARGPQPWKRSARGGRAPRRGEGGARTARLKPPSRLQV 326

Query: 321 VKMIMERKFQPVIVFSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEED 378
           V  +   +  P IVF FSR  CEQ  H +  + +D  T+ E   + +V +     +   D
Sbjct: 327 VTALEGARLLPAIVFVFSRAGCEQAVHQVVNAGVDLTTEAEAARIREVIERRTADIPAGD 386

Query: 379 RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
             +         L+RG+A HH+GLLPV KE VE LF  GLVK ++ATET A+G+NMPA+T
Sbjct: 387 LGVLGFHFWAHALERGVAAHHAGLLPVFKETVEELFSAGLVKVVYATETLALGINMPART 446

Query: 439 VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGK 498
           VV  +++KW+G +H  +  GEY Q++GRAGRRG D  G  +++  + +E  T+  +   +
Sbjct: 447 VVLESLRKWNGSAHVTLSPGEYTQLTGRAGRRGIDVEGHAVVLAADDVEPATVSSLASRR 506

Query: 499 PAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAA 558
             PLVS FR +Y   +NL+ R   +     V++ SF QFQ ++ + ++  +  +      
Sbjct: 507 TYPLVSAFRPTYNMAVNLLERMP-RTRVREVLEQSFAQFQADRGVVELAAQARRKRRSLE 565

Query: 559 SLDASGEAEVA---EYHKLKLDIAQLEKKLMSE---ITRPE--RVLYYLGSGRLIKVREG 610
            L+      +    EY  L+  IA+ E  L  +     R E  R +  LG G ++  R+ 
Sbjct: 566 GLEKDMMCRLGDFREYASLRQAIAEAEADLSRDKAAARRSETGRTMSSLGRGDVVVFRK- 624

Query: 611 GTDWGWGVVVNV----VKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRL--SVPPDLR 664
           G     G+V+ V       P+  V    SR     +      +  +  +R+  SV P  R
Sbjct: 625 GRRRRHGIVLEVGADRTGTPTITVLGEDSRVASLTLDTAPDGVMRVGVLRVADSVDPH-R 683

Query: 665 PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
           P D  + +   V  L S   +G  K    +  + +      + N +E L H++ +HP + 
Sbjct: 684 PRDRDRLVQRLVDALRSGDLEGGTKRTRTRSSRAQARRDSAIEN-LERLRHEMRSHPCHG 742

Query: 725 SQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKL-------- 773
             D E   R  ++ +    E ++L+ ++  R   I +  D +     VL +L        
Sbjct: 743 CPDREEHTRVGRKWSRARAEAERLQRRIETRTGTIARLFDAV---CEVLLELGYLRPVDR 799

Query: 774 GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA-ALASCFIPVDKSSE 832
           GH + +  V   G+    I    +LL+ E +  G F DL   ++A AL++C      S++
Sbjct: 800 GHPERELRVTGAGKVLARIYAERDLLIAECLRTGVFEDLSAAELAGALSACVYEPRLSAQ 859

Query: 833 QINLRMELAKPLQQLQES----ARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            I L +     L Q   +    + +I ++++  ++E +      S   P L   +  W  
Sbjct: 860 SIGLPVAPGSRLGQCLRAQLGVSHRIHDLESLARIEAS------SGAEPALAGSVQAWCD 913

Query: 889 GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA--------QAVGEVNLEKKFAAAS 940
           GA  A+++  T++  G  +R  ++L + + Q+ + +        QA    +L  + A AS
Sbjct: 914 GAQLADILDATELTAGDFVRWCKQLLDVVGQIASLSPPPDASPEQARAVTSLSMRAAEAS 973

Query: 941 ESLRRGIM 948
             L RG++
Sbjct: 974 LDLNRGVV 981


>gi|449473300|ref|XP_004153842.1| PREDICTED: helicase SKI2W-like, partial [Cucumis sativus]
          Length = 520

 Score =  382 bits (982), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/506 (41%), Positives = 298/506 (58%), Gaps = 54/506 (10%)

Query: 88  LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVG 147
           LE+ +SV V+AHTSAGKT VAEYA A+A +   R +YT+P+K +SNQKYR+   +F DVG
Sbjct: 5   LEKGDSVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAPIKTISNQKYRDFCGKF-DVG 63

Query: 148 LMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESI 207
           L+TGDV+L P ASCL+MTTEILR MLYRG+++++++ WVIFDE+HY+ D ERGVVWEE I
Sbjct: 64  LLTGDVSLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDIERGVVWEEVI 123

Query: 208 IFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYL 267
           I LP  I +V LSAT+ N  +FA+WI    ++  HV  T  RP PL+H +F    SG   
Sbjct: 124 IMLPRHINIVLLSATVPNTIEFADWIGRTKQKRIHVTGTAKRPVPLEHCIFY---SGELY 180

Query: 268 VVDEKEQF------------------------------------REDNFVKLQDTFLKQK 291
            + E E F                                     ++  V+  +   + K
Sbjct: 181 KICESEIFLSHGLKAAKDASKKKNSSVVGGAGGSHAGASVANDGTKNRKVESFNRSKQNK 240

Query: 292 IGGRRENGKASGRM---AKGGSG--------SGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
             G +  G  SG      K G G        S  S    ++  + ++   PV++F FS+ 
Sbjct: 241 HSGSQNLGNFSGTSWGNQKNGDGHNNWGSRRSDASLWLLLINRLSKKSLLPVVIFCFSKN 300

Query: 341 ECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
            C++ A ++  +D  +  EK  +      A   L   DR+LP I  +  LL+RGI VHH+
Sbjct: 301 RCDKSADNIYSIDLTSSSEKSEIRVFCDKAFSRLKGSDRSLPQIVRVQGLLRRGIGVHHA 360

Query: 401 GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
           GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF  ++K+DG   R +  GEY
Sbjct: 361 GLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEY 420

Query: 461 IQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
            QM+GRAGRRG D  G  I+M  E++ E   LK +++G    L S FRL+Y  IL+L+ R
Sbjct: 421 TQMAGRAGRRGLDKIGTVIVMCREEIPEEKDLKRVIVGTATKLESQFRLTYIMILHLL-R 479

Query: 520 AEGQFTAEHVIKNSFHQFQYEKALPD 545
            E +   E ++K SF +F  +K LP+
Sbjct: 480 VE-ELKVEDMLKRSFAEFHAQKKLPE 504


>gi|345491941|ref|XP_001599855.2| PREDICTED: helicase SKI2W-like [Nasonia vitripennis]
          Length = 1153

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 227/591 (38%), Positives = 337/591 (57%), Gaps = 61/591 (10%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A T+ +ELD FQ+ ++  LE    V V+AHTSAGKT +AEYAIAM+ +   R IYTSP+K
Sbjct: 208 AMTFPYELDTFQKQAILKLEEQCDVFVAAHTSAGKTTIAEYAIAMSQKHMTRTIYTSPIK 267

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+RE  ++F++VGL+TGD+ + P A+CL+MTTEIL+ MLY  +EV+++V +VIFD
Sbjct: 268 ALSNQKFREFKEKFENVGLITGDLQIEPTATCLIMTTEILQSMLYCAAEVIRDVEYVIFD 327

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ + +RG VWE+ II LPP + +V LSAT+ N  +FA W+  + ++  +V+ T  R
Sbjct: 328 EVHYINNEDRGHVWEQVIILLPPTVNIVMLSATVPNPLEFAHWVGQIKRRKMYVISTVKR 387

Query: 250 PTPLQHYVFP----VGGSGLYLVVDEKEQF--------------REDNFVKLQDTFLKQK 291
           P PLQHY++          L+L+VD+  +F              +  N  K Q T    K
Sbjct: 388 PVPLQHYLYTGCDKKSKDQLFLLVDKDGKFIRSSIKEAIAIKKEQSANQKKSQQT----K 443

Query: 292 IGGRRENGK------ASGRMAKGGSGSGGSDIFKIVK-------------MIMERKFQPV 332
              +RE  K       S  + K  S +   D     K             MI  +  +  
Sbjct: 444 YQHQREQAKQKPSLTMSPSVLKNLSAAETLDSVAAAKEEEDKLEDQVRQQMITAKDKRMW 503

Query: 333 IVF---------------SFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEE 377
           + F                 SR  C++ A + S+   N  E++  V + F  ++  L   
Sbjct: 504 VAFLDHLQSTDKLPVVIFILSRNRCDKTANAFSESLLNHAEQR-YVGEFFDKSIRHLKGT 562

Query: 378 DRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAK 437
           D  LP +  M  LLK GI VHHSG+LP++KE+VE+LFQ+G+VK LFATETFAMG+NMPAK
Sbjct: 563 DSQLPQVRKMQRLLKLGIGVHHSGILPILKEIVEMLFQKGIVKVLFATETFAMGVNMPAK 622

Query: 438 TVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVL 496
           TVVF + +K+DG+S R +   EYIQM+GRAGRRG D+ G  II+  +++ E   L+DMVL
Sbjct: 623 TVVFDSWEKYDGNSSRNLLPTEYIQMAGRAGRRGHDETGTVIILCKKKVPEEKDLRDMVL 682

Query: 497 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKL--E 554
           G P  L S F+++Y  IL+L  R     +   +++ SF + +   +      ++ K+  E
Sbjct: 683 GAPQNLESKFKVTYSMILHL-KRLSETISVGDMMRRSFKEVKTWSSQKKNKNELEKILQE 741

Query: 555 EEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLI 605
            E A   A  + E+ +++ L      L K+L   +   ++ +  L  GR++
Sbjct: 742 IEQAPPLAEHQKEMEQFYDLAKTYVTLWKELRPSMLEGKKAVKSLVEGRVL 792



 Score = 68.6 bits (166), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/265 (26%), Positives = 133/265 (50%), Gaps = 37/265 (13%)

Query: 660  PPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL-VNQIEELEHKLF 718
            P  +  ++   ++ LAVQ+        L  + P  ++KI+  E+ DL +   E L H ++
Sbjct: 906  PSCVAAMNELSTLSLAVQD-------DLSVIQPFLELKIQCMEIKDLHLQNKEALLHHIY 958

Query: 719  A--HPL------NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
                P+        + D+   + F+ K E+  +  +L  ++ D  +  +  E ++R  VL
Sbjct: 959  QMLKPIQDKLEGTTNLDQEFYQVFKYK-ELEQKKHELLKRLGDEYLGNY-PEYESRLAVL 1016

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            K+L +ID +  V LKGR A  + T  E+ +TEL+ +    +    ++AA+ S  +   KS
Sbjct: 1017 KELDYIDREDRVTLKGRVALEMGTC-EIFLTELVLDNVLTNWQPEEIAAMLSSLVFQHKS 1075

Query: 831  SEQ-----INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF--LMDVI 883
            +++     I    EL K + Q+ E   K+A+I+        +  Y++   +P   L+ V+
Sbjct: 1076 NDEEKDDDIPKLNELKKEMTQVYE---KLAKIE--------MKHYLDPIAQPSFQLIRVV 1124

Query: 884  YCWSKGATFAEVIQMTDIFEGSIIR 908
            Y W++  +FA ++++TDI EG I+R
Sbjct: 1125 YEWARQMSFANIMKLTDIQEGIIVR 1149


>gi|428777026|ref|YP_007168813.1| DSH domain-containing protein [Halothece sp. PCC 7418]
 gi|428691305|gb|AFZ44599.1| DSH domain protein [Halothece sp. PCC 7418]
          Length = 884

 Score =  380 bits (975), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 290/903 (32%), Positives = 458/903 (50%), Gaps = 107/903 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQ  ++A LE  +SV+VS  T +GKT V EYAI  A    +RV YT+P
Sbjct: 9   DLKTLFPFELDNFQIRAIAALEAKKSVVVSVPTGSGKTLVGEYAIHRALARGKRVFYTTP 68

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS--EV---L 180
           LKALSNQK R+  + F    VGL+TGD++++ NA  +VMTTEI R MLY  S  EV   L
Sbjct: 69  LKALSNQKLRDFQETFGSDQVGLLTGDISVNRNAGVVVMTTEIFRNMLYGTSIGEVGTSL 128

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
           + V  V+ DE HYM D  RG VWEESII+ P ++++V LSAT++NA Q  +WI ++H  P
Sbjct: 129 ENVEAVVLDECHYMNDPNRGTVWEESIIYCPKSVQLVALSATIANAGQLTDWINNIHG-P 187

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK 300
             +V +D RP PL+ Y       GL+ ++++            Q T +  ++  ++++ K
Sbjct: 188 TELVKSDHRPIPLEFYF--SNPKGLFPLLND------------QQTKINPRLKPKKKSNK 233

Query: 301 ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
              R++K    S    +  +V+ + +R+  P I F FSRR C+Q    ++ +   T EE 
Sbjct: 234 T--RVSKSDCPS----LKAVVEQLAQREMLPAIYFIFSRRGCDQSVQQLNGVSLVTAEES 287

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             ++Q  QN ++   E  R        +  L RGIA HH+G+LP  K LVE LF  GLVK
Sbjct: 288 QHIQQHLQNFLERHPEGAR-----AGQIEPLTRGIAAHHAGVLPAWKGLVEELFTHGLVK 342

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG--IC 478
            +FATET A G+NMPA+T V +++ K     HR + + E++QMSGRAGRRG D+RG  +C
Sbjct: 343 VVFATETLAAGVNMPARTTVISSLSKRTDQGHRLLRASEFLQMSGRAGRRGMDERGNVVC 402

Query: 479 IIMVDEQMEMNTLKD---MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           +     Q      K+   +   K  PLVS F  +Y  +LNL+ R   Q  A+ +++ SF 
Sbjct: 403 V-----QTRFEGAKEAAYLATQKSDPLVSQFTPTYGMVLNLLQRQTIQ-EAKSLLERSFA 456

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERV 595
           ++   + L    K +++L +E   +D    +   EY        Q  +KL  ++    R+
Sbjct: 457 EYLANQKLIPEQKAIAQLTQEITRIDFEIASIPREYF-------QQYQKLQGQLKEERRI 509

Query: 596 LYYLG-----------SGRLIKVREGGTDWGWGVVVNVV---------KKPSAG----VG 631
           L YL            +  + +VR G   +  G  V V          K  +AG    + 
Sbjct: 510 LKYLDRQAQRDRAPALAAAVSEVRAGDLLYLKGKYVTVSSPLPAVLIDKVATAGQPPLLI 569

Query: 632 TLPSRGGGYIVP---------VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
           TL +    YI           V LP  S L+ IR     +L+P   R+       E  + 
Sbjct: 570 TLAADNRWYIATQGDVCAIGEVLLPE-SALTNIRPPADLELKPGKRRKG-----DETTAE 623

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVN 741
             Q +  + P     ++ PEV     +I++L+ +L  HPL +  Q +  I+ + R+ ++ 
Sbjct: 624 IAQRMENVTPP---AVDPPEVEAQKAKIKDLQKRLNEHPLQQWGQPKEVIKTYNRRQQLQ 680

Query: 742 HEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            E++Q  S  R++Q Q +R E      VL+  G ++      L G  A  I   +EL + 
Sbjct: 681 EELEQHHSNTRENQSQHWR-EFIEICEVLETFGGLENYKPTSL-GETAAAIRGDNELWLG 738

Query: 802 ELMFNGTFNDLDHHQVAALASCFI----PVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
             + +G F++L    +AA ASC +    P   S       M +   L +L+   R++ ++
Sbjct: 739 LALRSGEFDELSPAYLAA-ASCALITETPRPDSESYFPPPMPVIHALSELRGVRRELFQV 797

Query: 858 QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
           Q   ++ + +       + P L+ ++  W +G  + E+ + T + EG ++R  RR  +FL
Sbjct: 798 QRRHRVAIPL------WLEPDLIGLVEQWVEGIDWNELCEATTLDEGDLVRILRRTRDFL 851

Query: 918 NQL 920
           +Q+
Sbjct: 852 SQI 854


>gi|118372686|ref|XP_001019538.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
 gi|89301305|gb|EAR99293.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
           SB210]
          Length = 1406

 Score =  379 bits (974), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 211/534 (39%), Positives = 315/534 (58%), Gaps = 67/534 (12%)

Query: 31  QRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLER 90
           ++ L  S  ++ AV   + L K       F   V   +MA+ Y FELD FQ+ SV  +ER
Sbjct: 387 EKKLQLSSSYDWAVEDQFNLAK-------FYEEVPKEKMAQQYPFELDAFQKRSVYRIER 439

Query: 91  NESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF-KDVGLM 149
            ESV V AHTSAGKT VAEYAIA++ +  ++ IYTSP+KALSNQKYR+  Q++  DVGL+
Sbjct: 440 KESVFVCAHTSAGKTVVAEYAIAISKKLNRKAIYTSPIKALSNQKYRDFKQKYGDDVGLV 499

Query: 150 TGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIF 209
           TGDV L+PNA+CL++TTEILR MLYR +++++++ WVIFDE+HY+ + ERG+VWEE+II 
Sbjct: 500 TGDVQLNPNANCLIVTTEILRNMLYRNNDIIRDIEWVIFDEVHYLNNPERGLVWEETIIM 559

Query: 210 LPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVG-------G 262
           LP  +  V LSAT+ N  +FA W+    K+  +V  TDFRP PL+H ++  G       G
Sbjct: 560 LPETVGFVMLSATVPNYMEFANWVGRTKKRKIYVQKTDFRPVPLEHSIYLNGSIEVIKQG 619

Query: 263 SGLYLVVDEKEQFREDNFVKLQDTFLKQK---------------IGGRRENGKASGRMAK 307
              +   D  +QF+     ++  T++ QK                 G  +N   S R  +
Sbjct: 620 DNRFNATD-YDQFKN----RIIKTYMNQKNQLTAQKKSLKLEKYQKGILKNTNTSMRNKR 674

Query: 308 G-----------------GSGSGGSDIFKIVKMIME---RKFQPVIVFSFSRRECEQHAM 347
                              S S  ++ F +++++++       P ++F FS+R+ ++ A 
Sbjct: 675 TMKAITEKFIKSTDEDDYNSSSSTNEGFNLMQLLIKCQNENLLPCVIFCFSKRKIDEIAN 734

Query: 348 SMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
            + +L+F   EE  + +         +   D N+P I+ +  LL RGI +HH  ++P +K
Sbjct: 735 QIKQLNFCDYEETCSRK---------IKSRDLNVPQIQTIKDLLLRGIGIHHGDVIPFMK 785

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE+LF + L+K L ATETFAMG+NMP KTV+F ++KK+D    R + S E+ QMSGRA
Sbjct: 786 EVVEILFSQSLIKVLIATETFAMGINMPTKTVIFHSLKKFDSSGERLLNSSEFTQMSGRA 845

Query: 468 GRRGKDDRGICIIMVD--EQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS 518
           GRRG D +G  II V+  EQ+   N L  ++  K   L S F+++Y +I+NL++
Sbjct: 846 GRRGLDVKGNVIIFVNSIEQLPSKNDLNIIMDTKGQYLESKFKITYETIINLLN 899



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 22/240 (9%)

Query: 732  RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
            + F+RK ++  ++++L  K+ ++ + + R   +++ ++LK+ G++D       K R A  
Sbjct: 1168 QVFERK-QIKTDLEELIKKVDENDLNQ-RTSFESKLKILKRFGYVDLVNKPTFKARIAKE 1225

Query: 792  IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR-MELAKPL----QQ 846
            I     + VTE++F  +   L+   +AAL S F+   KS   +    ++   P       
Sbjct: 1226 IQN---IYVTEVIFQESLESLEECDIAALLSGFVCQAKSKSAVKYDPIDDFSPFYPNYDN 1282

Query: 847  LQESARKI-----AEIQNECKLEV----NVDEYV--ESTVRPFLMDVIYCWSKGATFAEV 895
              ES  +I     A I  EC+  V    N D+Y+  +  +R  L++V+Y W  G  F  +
Sbjct: 1283 FMESYLEIIQSVKAVISYECQFGVIQCGNEDDYMFDQVYIRD-LIEVVYQWMNGMDFQNI 1341

Query: 896  IQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +MT I EG+I+RS  RL+  L  +R     +G   +  K     E L++ I+FS SLYL
Sbjct: 1342 CEMTSIQEGAIVRSFLRLENLLKNVRNGYIIMGNYAMGVKLDRCMEMLKKDIIFSKSLYL 1401


>gi|313231718|emb|CBY08831.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/307 (58%), Positives = 226/307 (73%), Gaps = 12/307 (3%)

Query: 38  CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           C HEV+V S   + + +A           G  A+ Y F LDPFQ  SV CL+ ++SVLVS
Sbjct: 74  CSHEVSVNSSEEVPELQA---------RTGPAAREYKFTLDPFQERSVLCLDNHQSVLVS 124

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT VAEYAI++A RDKQRVIYT+P+KALSNQKYR+L +EF DVGLMTGDVT++P
Sbjct: 125 AHTSAGKTVVAEYAISLALRDKQRVIYTTPIKALSNQKYRDLQEEFVDVGLMTGDVTINP 184

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
           +ASCLVMTTEILR MLY+GSE+++EV WV+FDEIHYM+D ERGVVWEE+II LP  ++ V
Sbjct: 185 SASCLVMTTEILRSMLYKGSEIMREVQWVVFDEIHYMRDSERGVVWEETIILLPDNVRYV 244

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA +FAEWICHLHKQPC+ VYT++RPTPLQHY+FP GG GL+LVV++K +F +
Sbjct: 245 FLSATIPNAKEFAEWICHLHKQPCNAVYTEYRPTPLQHYIFPCGGDGLHLVVNDKREFND 304

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
             F    +     +  G    G A  R    G   G S+I K+VK   E  F P+IVFSF
Sbjct: 305 AEF---DNAMAVLRNAGDMAKGDARNRRQPRGGTQGPSNIKKLVKYCHENNFLPLIVFSF 361

Query: 338 SRRECEQ 344
           S+++ E+
Sbjct: 362 SKKDVEE 368


>gi|313240235|emb|CBY32582.1| unnamed protein product [Oikopleura dioica]
          Length = 382

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/306 (58%), Positives = 225/306 (73%), Gaps = 12/306 (3%)

Query: 38  CVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVS 97
           C HEV+V S   + + +A           G  A+ Y F LDPFQ  SV CL+ ++SVLVS
Sbjct: 74  CSHEVSVNSSEEVPELQA---------RTGPAAREYKFTLDPFQERSVLCLDNHQSVLVS 124

Query: 98  AHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSP 157
           AHTSAGKT VAEYAI++A RDKQRVIYT+P+KALSNQKYR+L +EF DVGLMTGDVT++P
Sbjct: 125 AHTSAGKTVVAEYAISLALRDKQRVIYTTPIKALSNQKYRDLQEEFVDVGLMTGDVTINP 184

Query: 158 NASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMV 217
           +ASCLVMTTEILR MLY+GSE+++EV WV+FDEIHYM+D ERGVVWEE+II LP  ++ V
Sbjct: 185 SASCLVMTTEILRSMLYKGSEIMREVQWVVFDEIHYMRDSERGVVWEETIILLPDNVRYV 244

Query: 218 FLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE 277
           FLSAT+ NA +FAEWICHLHKQPC+ VYT++RPTPLQHY+FP GG GL+LVV++K +F +
Sbjct: 245 FLSATIPNAKEFAEWICHLHKQPCNAVYTEYRPTPLQHYIFPCGGDGLHLVVNDKREFND 304

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
             F    +     +  G    G A  R    G   G S+I K+VK   E  F P+IVFSF
Sbjct: 305 AEF---DNAMAVLRNAGDMAKGDARNRRQPRGGTQGPSNIKKLVKYCHENNFLPLIVFSF 361

Query: 338 SRRECE 343
           S+++ E
Sbjct: 362 SKKDVE 367


>gi|350645898|emb|CCD59443.1| helicase, putative [Schistosoma mansoni]
          Length = 1314

 Score =  379 bits (972), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/490 (40%), Positives = 294/490 (60%), Gaps = 41/490 (8%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  + FELD FQ+ ++ CLE NE+V VSAHTS+GKT VAEYA A+  R   RV+YTSP+K
Sbjct: 157 ALNWDFELDTFQKRAILCLENNETVFVSAHTSSGKTVVAEYACAICLRRGSRVVYTSPVK 216

Query: 130 ALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           ALSNQK+ E  + F ++VGL+TGD+ L+  AS L+MTTEIL  ML   SE++K +  VI 
Sbjct: 217 ALSNQKFHEFRERFGENVGLITGDIKLAQEASLLIMTTEILYNMLCNASEIIKNLEIVIL 276

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ + +RG VWE+ +I LP  I +V LSAT+ N+ + A+W+  +     HV+ TD 
Sbjct: 277 DEVHYINNPDRGYVWEQIMIMLPKHILLVMLSATVPNSFEIADWLGRVRGCEIHVIATDK 336

Query: 249 RPTPLQHYVFPVGG----SGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           RP PL+HY++        S L+L+VD+  +F +  +          +      N +   R
Sbjct: 337 RPVPLEHYLYTSMTEQYTSHLHLIVDKDGRFIDSGY----------QTAALSNNSRRPYR 386

Query: 305 MAKGGSGSGGSDIFKI---------VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
                    G D F +         V ++ E+   P I F+FSR   E  A ++S +D  
Sbjct: 387 ----SPACSGKDAFLVQTKNTWLGFVNLLKEQNLMPAIAFAFSRSSVETLAKNLSSVDLT 442

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
           ++ EK  + + F      L + DR L +++ +  L +RG+AVHHSG+LP++KE VELLF+
Sbjct: 443 SKSEKQQITKFFSTITGRLRKCDRKLASVKFLHDLTRRGLAVHHSGMLPILKETVELLFR 502

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           +GLVK LFATET + G+N PA+ VVFT+++K+DG   R +   E+ QM+GRAGRRG D +
Sbjct: 503 DGLVKILFATETVSTGVNTPARCVVFTSLEKFDGQRRRPLDPSEFTQMAGRAGRRGIDAK 562

Query: 476 GICIIMVDEQMEM-----------NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
           G+ II+V    +            + L++M+LG+   L+S FR++Y  ILNL        
Sbjct: 563 GLVIILVSTIGKSLKSSVTGLPTESLLRNMILGRQTELISRFRVTYSMILNL--HRSSSL 620

Query: 525 TAEHVIKNSF 534
           T + ++K SF
Sbjct: 621 TPQDIMKRSF 630



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 111/242 (45%), Gaps = 32/242 (13%)

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDA---DGVVQLKGRAACLIDTGDELLV 800
            I  +++ + + Q+Q   +E   R  VLKKLG ID+      +  KG  AC + T  E+L+
Sbjct: 1065 INSIENNLANYQLQ-LSNEYTGRLSVLKKLGFIDSATQSYCLSFKGFFACEL-TSKEVLL 1122

Query: 801  TELMFNGTFNDLDHHQVAALASCFI-----------------------PVDKSSEQINLR 837
            T+L+ +G  +DL    +AA+ S F                         ++  +   NL 
Sbjct: 1123 TQLLLDGFIDDLLAPDIAAVLSAFANELRAQDLTPEKTSGYYLKELFDSINNYTNNFNLH 1182

Query: 838  MELAKPLQQLQESARKIA----EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
             +L    + L    + +     E++   +L    D Y+ES +   ++ ++Y W+ G +F+
Sbjct: 1183 KDLECIPRHLLPVFKNVLICVYELEKLQRLHNLTDPYLESRLDLRIVPLVYKWANGYSFS 1242

Query: 894  EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
              +   DI EGS+I+S  +LDE +  +  A +  G   L  K   A   + R I+ S SL
Sbjct: 1243 ATVSKCDIPEGSLIKSLLQLDELIRHISGACRQFGNHILSLKIDEARGLIHRDIVCSPSL 1302

Query: 954  YL 955
            Y+
Sbjct: 1303 YV 1304


>gi|256075988|ref|XP_002574297.1| helicase [Schistosoma mansoni]
          Length = 1295

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/490 (40%), Positives = 294/490 (60%), Gaps = 41/490 (8%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  + FELD FQ+ ++ CLE NE+V VSAHTS+GKT VAEYA A+  R   RV+YTSP+K
Sbjct: 157 ALNWDFELDTFQKRAILCLENNETVFVSAHTSSGKTVVAEYACAICLRRGSRVVYTSPVK 216

Query: 130 ALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           ALSNQK+ E  + F ++VGL+TGD+ L+  AS L+MTTEIL  ML   SE++K +  VI 
Sbjct: 217 ALSNQKFHEFRERFGENVGLITGDIKLAQEASLLIMTTEILYNMLCNASEIIKNLEIVIL 276

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ + +RG VWE+ +I LP  I +V LSAT+ N+ + A+W+  +     HV+ TD 
Sbjct: 277 DEVHYINNPDRGYVWEQIMIMLPKHILLVMLSATVPNSFEIADWLGRVRGCEIHVIATDK 336

Query: 249 RPTPLQHYVFPV----GGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           RP PL+HY++        S L+L+VD+  +F +  +          +      N +   R
Sbjct: 337 RPVPLEHYLYTSMTEQYTSHLHLIVDKDGRFIDSGY----------QTAALSNNSRRPYR 386

Query: 305 MAKGGSGSGGSDIFKI---------VKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
                    G D F +         V ++ E+   P I F+FSR   E  A ++S +D  
Sbjct: 387 ----SPACSGKDAFLVQTKNTWLGFVNLLKEQNLMPAIAFAFSRSSVETLAKNLSSVDLT 442

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
           ++ EK  + + F      L + DR L +++ +  L +RG+AVHHSG+LP++KE VELLF+
Sbjct: 443 SKSEKQQITKFFSTITGRLRKCDRKLASVKFLHDLTRRGLAVHHSGMLPILKETVELLFR 502

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           +GLVK LFATET + G+N PA+ VVFT+++K+DG   R +   E+ QM+GRAGRRG D +
Sbjct: 503 DGLVKILFATETVSTGVNTPARCVVFTSLEKFDGQRRRPLDPSEFTQMAGRAGRRGIDAK 562

Query: 476 GICIIMVDEQMEM-----------NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
           G+ II+V    +            + L++M+LG+   L+S FR++Y  ILNL        
Sbjct: 563 GLVIILVSTIGKSLKSSVTGLPTESLLRNMILGRQTELISRFRVTYSMILNL--HRSSSL 620

Query: 525 TAEHVIKNSF 534
           T + ++K SF
Sbjct: 621 TPQDIMKRSF 630



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%)

Query: 867  VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
             D Y+ES +   ++ ++Y W+ G +F+  +   DI EGS+I+S  +LDE +  +  A + 
Sbjct: 1197 TDPYLESRLDLRIVPLVYKWANGYSFSATVSKCDIPEGSLIKSLLQLDELIRHISGACRQ 1256

Query: 927  VGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             G   L  K   A   + R I+ S SLY+
Sbjct: 1257 FGNHILSLKIDEARGLIHRDIVCSPSLYV 1285


>gi|68076467|ref|XP_680153.1| helicase  [Plasmodium berghei strain ANKA]
 gi|56501043|emb|CAH95426.1| helicase with Zn-finger motif, putative [Plasmodium berghei]
          Length = 1346

 Score =  378 bits (970), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 205/525 (39%), Positives = 306/525 (58%), Gaps = 61/525 (11%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            ++  +Y FELD FQ+ SV  +   + V V+AHTSAGKT +AE+AIA++ +  ++ IYTS
Sbjct: 283 NDLLLSYDFELDDFQKRSVKHINNFKHVFVAAHTSAGKTLIAEHAIALSIKLNKKAIYTS 342

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKY E    FK+VG++TGDV ++ NA+CL+MTTEILR +LY    ++  +  V
Sbjct: 343 PIKALSNQKYYEFKNIFKNVGIITGDVKMNVNANCLIMTTEILRNLLYLNDNIINNIHCV 402

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D  RGV+WEESII LPP +++V LSAT+ N  QFA+W+    ++    + T
Sbjct: 403 IFDEVHYVNDEFRGVIWEESIIMLPPHVQIVLLSATVPNYLQFADWVGFTKQKEVIAIST 462

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDT---------FLKQKIG 293
             RP PL HY++      L+L++DEK +F    F    +K+++           +    G
Sbjct: 463 KKRPVPLLHYIY--AHDSLFLIMDEKNKFYSSAFKEIYIKIREKEESGKKGKELMGSSHG 520

Query: 294 GRRE-------NGKASG--RMAKGGSGSGGSD--------------------IFK----- 319
           G+++       N K +   +  K G+ +   D                    +F+     
Sbjct: 521 GKKKIYYSDAKNNKDNQMEKQNKTGTANNSGDKQNNTVKGYYQYCKQKQKQRMFQNEANM 580

Query: 320 ---------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
                    ++K + E    PV++F FSR +CE +A SM  L+F   ++K  V    + +
Sbjct: 581 KTEIQKLQALIKKLDEDNKLPVVLFCFSRIKCETYAKSMPHLNFLDNKKKSKVHLFIKES 640

Query: 371 VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
              L ++DR L  I+++  LL+ GI VHHSGLLP++KE+VE+LF +GL+K LFATETFAM
Sbjct: 641 ASKLCDQDRELNQIKILSKLLENGIGVHHSGLLPILKEIVEILFSKGLIKVLFATETFAM 700

Query: 431 GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMN 489
           G+NMPAK+V+FT++ K D    R + S EY QMSGRAGRR  D  G   I   + + +  
Sbjct: 701 GINMPAKSVIFTSIYKHDHLKKRILTSSEYTQMSGRAGRRSSDSYGYVYIYCSDNIPDQV 760

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            L +M++ K   L S F+++Y  IL L+     Q   E ++ +SF
Sbjct: 761 QLTEMMMQKAVSLKSKFKVTYNMILKLL--INKQINIEKMLFSSF 803



 Score =  108 bits (270), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 7/273 (2%)

Query: 684  PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE 743
            P  L K+  +K +K E   V  L+NQ + LE    +   N S  +       +K +  ++
Sbjct: 1079 PFTLTKM--LKSLKCEFYSV--LINQSDYLESLKKSLCYNCSLKDEHYELVCKKNDCIND 1134

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I+ ++  +    +  + D L+ +  VLK    ID D  + +KG+ A  I   DE+ +T++
Sbjct: 1135 IENIERNINAKSLNLYED-LEGKLNVLKHFSFIDDDNNLTIKGKIASYITLTDEITLTQI 1193

Query: 804  MFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            +F    N+L+  ++AA+ SCF+ P  K  E  +L + L      L     K  E     +
Sbjct: 1194 IFENVLNNLNPPEIAAVLSCFVSPEKKVEESPDLTLNLQDIKLALTNIHSKFEEFYRVIR 1253

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            L+++ +E+ +      LM + Y W+ G +F+E+++ ++  EG I+RS +RLD    ++R 
Sbjct: 1254 LKISTEEHWK-LCNFKLMFIAYKWALGVSFSELLEQSEFEEGLIVRSIQRLDNLCRKVRI 1312

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A   +G  +L +K   AS  LRR I+F+ SLYL
Sbjct: 1313 AFLYLGNADLAEKTEKASLLLRRDIVFTTSLYL 1345


>gi|75909112|ref|YP_323408.1| type III restriction enzyme, res subunit [Anabaena variabilis ATCC
           29413]
 gi|75702837|gb|ABA22513.1| Type III restriction enzyme, res subunit [Anabaena variabilis ATCC
           29413]
          Length = 893

 Score =  377 bits (969), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 276/903 (30%), Positives = 464/903 (51%), Gaps = 83/903 (9%)

Query: 59  TFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
            +  P    ++   + F+LD FQ+ ++A L    SV+V A T +GKT V EYAI  A   
Sbjct: 2   NYPAPSPELDLGLIFPFDLDQFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALAR 61

Query: 119 KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
            +RV YT+PLKALSNQK R+  ++F  + VGL+TGD +++ +A  LVMTTEI R MLY G
Sbjct: 62  GKRVFYTTPLKALSNQKLRDFREKFGFEQVGLLTGDASINRDAPILVMTTEIFRNMLY-G 120

Query: 177 SEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFA 230
           + +      L +V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  
Sbjct: 121 TPIGQVGISLVDVEAVVLDECHYMNDRQRGTVWEESIIYCPRGVQLVALSATVANSDQLT 180

Query: 231 EWICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK 289
           +W+  +H  P  ++Y+DFRP PL+ HY  P    GL+ ++++                 K
Sbjct: 181 DWLSRVHG-PTDLIYSDFRPVPLEFHYCNP---KGLFPLLNDS----------------K 220

Query: 290 QKIGGRREN--GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
            KI  R  N   K  G   K G     S I+ +   + +R   P I F FSRR C++   
Sbjct: 221 TKINPRLANRGKKRQGDRGKNGRPEAPSLIYTL-NQLQQRDMLPAIYFIFSRRGCDKAVA 279

Query: 348 SMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
            +  L     EE     Q+ +  +D     +        + PL  RG+A HH+G+LP  K
Sbjct: 280 EVGDLWLVNNEES----QILRRQIDDFLARNPEAGRSGQIAPLY-RGVAAHHAGILPAWK 334

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
            LVE LFQ+GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRA
Sbjct: 335 VLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDTGHRLLNASEFLQMAGRA 394

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D +G  + +            +   KP PLVS F  SY  +LNL+ +      A+
Sbjct: 395 GRRGMDKQGHVVTVQTPFEGSKEAAYLATSKPDPLVSQFTPSYGMVLNLL-QTHTIDEAK 453

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL----DASGEAEVAEYHKLKLDIAQLEK 583
            +I+ SF Q+     L    ++++ LE E A L    +A  E+++  Y KL+  + ++E+
Sbjct: 454 ELIERSFGQYMATLHLRPDYEEIAALEGELAKLQEQINAVDESDILIYEKLRQRL-KVER 512

Query: 584 KLMSEITRP---------ERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT-- 632
           +L+  +            + +L +  SG L+ ++         +   +V K S    +  
Sbjct: 513 QLLKTLQEQAQEERQEQIKMLLDFAISGTLLSLKGKNITASTPITAVLVGKTSGSTQSAC 572

Query: 633 --LPSRGGGYIVPVQLPLISTLSKI-RLSVPPDLRP-----LDARQSILLAVQELESRFP 684
                +   + V     ++   +++ R+ VPPD+ P     L   QS   A + +     
Sbjct: 573 LVCLGQDNRWYVASTADVVDLYAELPRVDVPPDILPPPELILKPGQSSRGAKETMA--IA 630

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHE 743
           Q +P  +P + + +  PEV + +++   ++ +L A+PL++S + + + +   R  E+  E
Sbjct: 631 QSIP--DPQQSLHLS-PEVAEQLSRTAAIQAQLEANPLHQSGNVSTVFKARARYVELEAE 687

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
           ++++++++ + Q Q++ +E  N   +L++   +D + V    G+ A  I   +EL +   
Sbjct: 688 LEEIQAQV-EQQSQRYWEEFLNLITILQQFDCLD-NLVPTALGQIAAAIRGENELWLGLA 745

Query: 804 MFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
           + +G  N+LD H +AA  +  +   P   S    NL  E+     +LQ++ R + ++Q  
Sbjct: 746 LASGELNNLDPHHLAATIAALVTETPRPDSRVNFNLSPEIDDAWSRLQKTRRAVLKVQYR 805

Query: 861 CKLEVNV---DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
             + + V   + Y+       L+ ++  W+ G  + E+ Q T + EG ++R  RR  + L
Sbjct: 806 HGVALPVGLENRYIG------LIALVEQWALGIEWVELCQNTTLDEGDVVRILRRSLDLL 859

Query: 918 NQL 920
           +Q+
Sbjct: 860 SQI 862


>gi|68531943|ref|XP_723656.1| antiviral protein ski2 [Plasmodium yoelii yoelii 17XNL]
 gi|23478020|gb|EAA15221.1| antiviral protein ski2 [Plasmodium yoelii yoelii]
          Length = 1358

 Score =  377 bits (968), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 204/525 (38%), Positives = 305/525 (58%), Gaps = 61/525 (11%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            ++  +Y+FELD FQ+ SV  +   + V V+AHTSAGKT +AE+AIA++ +  ++ IYTS
Sbjct: 295 NDLLLSYNFELDDFQKRSVKHINNFKHVFVAAHTSAGKTLIAEHAIALSIKLNKKAIYTS 354

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKY E    FK+VG++TGDV ++ NA+CL+MTTEILR +LY    ++  +  V
Sbjct: 355 PIKALSNQKYYEFKNIFKNVGIITGDVKMNVNANCLIMTTEILRNLLYLNDNIINNIHCV 414

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D  RGV+WEESII LPP +++V LSAT+ N  QFA+W+    ++    + T
Sbjct: 415 IFDEVHYVNDEFRGVIWEESIIMLPPHVQIVLLSATVPNYLQFADWVGFTKQKEVIAIST 474

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDT---------FLKQKIG 293
             RP PL HY++      L+L++DEK +F    F    +K+++           +    G
Sbjct: 475 KKRPVPLLHYIY--AHDSLFLIMDEKNKFYSSAFKEIYIKIREKEEAGKKGKELMGSSHG 532

Query: 294 GRRE-------NGKASGRMAKGGSGSGGS------DIFK--------------------- 319
           G+++       N K +    +  +G+  +      D  K                     
Sbjct: 533 GKKKMYYSDPKNNKDNQMEKQNKTGTTNNLGDKQNDTVKGYYQYCKQKQKQRMFQNEANM 592

Query: 320 ---------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNA 370
                    ++K + E    PV++F FSR +CE +A SM  L+F   ++K  V    + +
Sbjct: 593 KTEIQKLQALIKKLDEDNKLPVVLFCFSRIKCETYAKSMPHLNFLDNKKKSKVHLFIKES 652

Query: 371 VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
              L ++DR L  I+++  LL+ GI VHHSGLLP++KE+VE+LF +GL+K LFATETFAM
Sbjct: 653 ASKLCDQDRELNQIKILSKLLENGIGVHHSGLLPILKEIVEILFSKGLIKVLFATETFAM 712

Query: 431 GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMN 489
           G+NMPAK+V+FT++ K D    R + S EY QMSGRAGRR  D  G   I   + + +  
Sbjct: 713 GINMPAKSVIFTSIYKHDHLKKRILTSSEYTQMSGRAGRRSSDSYGYVYIYCSDNIPDQV 772

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            L +M++ K   L S F+++Y  IL L+     Q   E ++ +SF
Sbjct: 773 QLTEMMMQKAVSLKSKFKVTYNMILKLL--INKQINIEKMLFSSF 815



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 141/273 (51%), Gaps = 7/273 (2%)

Query: 684  PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHE 743
            P  L K+  +K +K E   V  L+NQ + L+    +   N S  +       +K +  ++
Sbjct: 1091 PFTLTKM--LKSLKCEFYSV--LINQSDYLDSLKKSLCYNCSLKDEHYELVCKKNDCIND 1146

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
            I+ ++  +    +  + D L+ +  VLK    ID D  + +KG+ A  I   DE+ +T++
Sbjct: 1147 IENIERNINAKSLNLYED-LEGKLNVLKHFSFIDDDNNLTIKGKIASYITLTDEITLTQI 1205

Query: 804  MFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
            +F    N+L+  ++AA+ SCF+ P  K  E  +L + L      L     K  E     +
Sbjct: 1206 IFENVLNNLNPPEIAAVLSCFVSPEKKVEESPDLTLNLQDVKLALTNIHSKFEEFYKVIR 1265

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            L+++ +E+ +      LM + Y W+ G +F+E+++ ++  EG I+RS +RLD    ++R 
Sbjct: 1266 LKISTEEHWK-LCNFKLMFIAYKWALGVSFSELLEQSEFEEGLIVRSIQRLDNLCRKVRI 1324

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A   +G V+L +K   AS  LRR I+F+ SLYL
Sbjct: 1325 AFLYLGNVDLAEKTEKASLLLRRDIVFTTSLYL 1357


>gi|123425231|ref|XP_001306767.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
 gi|121888359|gb|EAX93837.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
          Length = 1066

 Score =  376 bits (965), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 208/519 (40%), Positives = 316/519 (60%), Gaps = 30/519 (5%)

Query: 47  GYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTA 106
            YA+ KD+  H  FA  V N  +  T+ F LDPFQ  S+  LE+ ++V V+A TSAGKT 
Sbjct: 187 SYAI-KDDWDHKKFATEVPNPSL--TFPFPLDPFQIRSMYRLEQGQTVFVAAPTSAGKTT 243

Query: 107 VAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTT 166
           VA+YAIA+A   K + +YTSP+KALSNQK+R+L ++F DVG++TGDV+++ +ASCL+MTT
Sbjct: 244 VAQYAIALARSHKMKTLYTSPIKALSNQKFRDLQKQFDDVGILTGDVSINRDASCLIMTT 303

Query: 167 EILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNA 226
           EILR MLY G+++L++V  VIFDE HY+ + ERGVVWEESII LP  I MVFLSAT+ NA
Sbjct: 304 EILRSMLYHGADILRDVECVIFDECHYISNDERGVVWEESIILLPFHINMVFLSATVPNA 363

Query: 227 TQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT 286
            + A+WI    ++  +V    FRP PL+H ++  GG  LY V                  
Sbjct: 364 MEIADWIGRTKQRMVYVEEQRFRPVPLEHLLY-TGGYELYPVS----------------- 405

Query: 287 FLKQKIG-GRRENGKASGRMAKGGSGSGGSDIF---KIVKMIMERKFQPVIVFSFSRREC 342
             K   G  + E   A   +    +  G  + F     ++ I +    P+++F F ++ C
Sbjct: 406 --KPGCGVDQLEYLYACNSLTHEENPFGQYNPFFWNDFIETIKKANLMPILIFCFKQKMC 463

Query: 343 EQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
           E  A  +    F T++E+  V+   + A+  LN+EDR+LP I+    LL+ GI +HH G+
Sbjct: 464 EDLADIVKHECFLTKQEQYHVKGFCRRALSRLNKEDRDLPQIQKTFELLENGIGIHHGGI 523

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LP++KE+VE+L  +G +K LF T TFAMG+N+PA++  F +++K++G     + S EY+Q
Sbjct: 524 LPILKEIVEILLADGYIKILFCTSTFAMGINVPARSCAFVSLEKYNGKEVASLTSTEYVQ 583

Query: 463 MSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
           MSGRAGRRG D  G  +I+  +Q+ +   L  +  GK   L S F+L + +ILNL+   +
Sbjct: 584 MSGRAGRRGLDSVGTSVILCFDQVPDFQYLTSLFQGKTEALQSQFKLKFNTILNLLRVRD 643

Query: 522 GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL 560
            Q     +++ S      +  +P + ++++  ++E ++L
Sbjct: 644 IQMV--DLLRRSLSANLIQSMMPQLVQQLNDTKQELSNL 680



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 127/235 (54%), Gaps = 3/235 (1%)

Query: 723  NKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
            N S  ++ +  + ++ E+    ++L+ +M D  +  F+  L     VL++L +I+ + ++
Sbjct: 832  NCSLLKSHLCTYNKQQELLDRKEELEHQMHDESL-AFKPLLDAHIDVLRELEYINNENIL 890

Query: 783  QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP--VDKSSEQINLRMEL 840
             LKGR +  I T  E+L TE++F+G F +L   + AAL SC     V    EQ  L   +
Sbjct: 891  LLKGRVSIEITTVHEILATEILFSGVFENLPPEECAALCSCLCCEGVYSYEEQRILPPNI 950

Query: 841  AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
               L      A  + + Q    +    D++ E  V P L  V+Y W+ G++F+++   TD
Sbjct: 951  PDALDTCYNIADDLQKKQAMFGVLDFQDDFSEKNVNPVLCHVVYEWALGSSFSQITDYTD 1010

Query: 901  IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + EG I+R+  R++E L     AA+ +G + L +KF+ A+E ++R I+F++SLY 
Sbjct: 1011 VAEGIIVRTINRVNECLRDFSNAAKLMGHMALSEKFSLATELVKRDIIFASSLYF 1065


>gi|433455773|ref|ZP_20413843.1| superfamily II RNA helicase [Arthrobacter crystallopoietes BAB-32]
 gi|432197131|gb|ELK53533.1| superfamily II RNA helicase [Arthrobacter crystallopoietes BAB-32]
          Length = 942

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 289/916 (31%), Positives = 452/916 (49%), Gaps = 95/916 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            ++T  FE+DPFQR +   LER   VLV+A T AGKT V E+AI +AF+   +  YT+P+
Sbjct: 25  FSQTLGFEMDPFQREACEALERGRGVLVAAPTGAGKTVVGEFAIYLAFQRGLKAFYTTPI 84

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY EL Q +    VGL+TGDV+++P+A  +VMTTE+LR MLY  S+ L E+ +V
Sbjct: 85  KALSNQKYTELVQVYGPDRVGLLTGDVSVNPHADVVVMTTEVLRNMLYANSDTLLELGYV 144

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE II LP  +++V LSAT+SNA +F  W+  + +    VV +
Sbjct: 145 VMDEVHYLADRFRGAVWEEVIIHLPSEVRLVSLSATVSNAEEFGAWLDTV-RGDTDVVVS 203

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDE---------------KEQFREDNFVKLQDTFLKQK 291
           + RP PL  +V  VG   L L   +                    E N   L+  + +QK
Sbjct: 204 EHRPVPLWQHVM-VGPDILDLFASDIAFDEAVPALSSGTGAGSRYEVNPELLELAYSEQK 262

Query: 292 IGGRRENGKASGRMAKGGSGSGGSDIFKI--------VKMIMERKFQPVIVFSFSRRECE 343
           +      G+ +GR  K         + +I        +  + +    P I F FSR  C+
Sbjct: 263 LNRASNWGRPAGRRGKRPPSRPQQPVSRIRRASRPEVIARLDKEGLLPAITFIFSRNGCD 322

Query: 344 QHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
                   + L   T+ E++ + +    A   + EED  +    L    L RGIA HH+G
Sbjct: 323 AAVRQCLDAGLWLTTEREREIIARRVDEAAREIPEEDLAVLGFWLWREGLIRGIAAHHAG 382

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           +LP  KE+VE LF +GLV+A+FATET A+G+NMPA+TVV   + K++G+SH  I +GEY 
Sbjct: 383 MLPTFKEVVEKLFADGLVRAVFATETLALGVNMPARTVVLEKLDKFNGESHVNITAGEYT 442

Query: 462 QMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
           Q++GRAGRRG D  G  +++     +   +  +   +  PL S+FR +Y   +NL+++  
Sbjct: 443 QLTGRAGRRGIDVEGHAVVLWQPGTDPAAVAGLASRRTYPLNSSFRPTYNMSVNLIAQF- 501

Query: 522 GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDI 578
           G+  A  +++ SF QFQ ++++  + K+V   EE  A    +      +  EY +L+ ++
Sbjct: 502 GRIRAREILETSFAQFQADRSVVGLAKQVRSREESLAGYAKAMTCHLGDFTEYARLRREL 561

Query: 579 AQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
              E +     +R  R      L  L  G +I V  GG + G+ V++ V   PS   G  
Sbjct: 562 KDAENQSAKSRSRHLRSAAVASLERLRRGDIIDV-PGGRNEGYAVILAV--DPS---GHE 615

Query: 634 PSRGGGYIVPVQLPLIST---------LSKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
           P R     +  Q+  IS          LS IR+    + R    R+ +  +V+   +   
Sbjct: 616 P-RPTVLTIDKQIRRISAQDLDGPVEVLSTIRVPKSFNGRSPKERRDLASSVR---NALH 671

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHE 743
           +  P        + E P       +I EL  KL +HP +   D E+  R  +R  ++  E
Sbjct: 672 ENRPPRRGSGRQEFEAPGTEGQERRIVELRRKLKSHPCHGCSDREDHARWSERWWKLRKE 731

Query: 744 IQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDA--DGVVQL--KGRAACLIDTGDE 797
             QL  ++  R + I K  D + +   +L   G++ A  DG V +   G     I    +
Sbjct: 732 TDQLMGQIQGRTNTIAKTFDRVCD---LLDTYGYLQAHPDGRVTISESGNRLRRIYGDRD 788

Query: 798 LLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
           LLV   +  G F+DLD  +VAA  S  +      E+  +R               K+  +
Sbjct: 789 LLVALCLQAGAFDDLDAAEVAAFVSSLV-FQAKREETGIRP--------------KMPSV 833

Query: 858 QNECKLEVNVDEYV------ESTVRPF-------LMDVIYCWSKGATFAEVIQMTDIFEG 904
             E  +++ V E+       E    P        L+  +Y W++G +    +Q T++  G
Sbjct: 834 SLETAVDIAVREWSVLNDREEQHKLPLSGEPELGLVWPMYKWAQGRSLLTALQGTELAAG 893

Query: 905 SIIRSARRLDEFLNQL 920
             +R A+++ + L+QL
Sbjct: 894 DFVRWAKQVIDLLDQL 909


>gi|117928413|ref|YP_872964.1| DSH domain-containing protein [Acidothermus cellulolyticus 11B]
 gi|117648876|gb|ABK52978.1| DSH domain protein [Acidothermus cellulolyticus 11B]
          Length = 906

 Score =  374 bits (960), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 280/911 (30%), Positives = 445/911 (48%), Gaps = 69/911 (7%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E A  Y F LDPFQ  +   LE  +SVLV+A T AGKT V E+A+ +A     +  YT+P
Sbjct: 29  EFAAGYDFPLDPFQVEACRALEEGKSVLVAAPTGAGKTVVGEFAVHLALAGGVKCFYTTP 88

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +  +      VGL+TGD T++  A  +VMTTE+LR MLY GS  L  + +
Sbjct: 89  IKALSNQKYLDFVRRHGPDRVGLLTGDNTINGEAPIIVMTTEVLRNMLYAGSSTLTGLGY 148

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP ++++V LSAT+SNA +F EW+  + +    V+ 
Sbjct: 149 VVMDEVHYLGDRFRGGVWEEVIINLPESVRLVALSATVSNAEEFGEWLITV-RGATEVIV 207

Query: 246 TDFRPTPL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG-GRRENGKASG 303
            + RP PL QH +       L++ VD + +         Q+   ++++   RR   +  G
Sbjct: 208 DEHRPVPLWQHMLVGHRLFDLFVEVDGERRVNPHLIRATQEAARRRQLAETRRHRSRQHG 267

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKD 361
           R     S        +IV+ +  +   P I+F FSR  C+Q       S L  N  EE D
Sbjct: 268 RRRPTAS------RVEIVERLDAQGLLPAIIFIFSRNGCDQAVEECLRSGLRLNRPEEAD 321

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            V+ + +  V  + + D         +  L+RGIA HH+G+LP+ KE VE LF  GLVK 
Sbjct: 322 EVQAIAEARVAGIADGDLRALGYGTWVEGLRRGIAAHHAGMLPIFKETVEELFAAGLVKV 381

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +FATET A+G+NMPA+TVV   + KW+G+ H  +  GEY Q++GRAGRRG D  G  ++ 
Sbjct: 382 VFATETLALGINMPARTVVLERLIKWNGEEHTPVTPGEYTQLTGRAGRRGIDVEGHAVVC 441

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
             E ++   +  +   +  PL S+FR SY   +NL+ +  G+  A  +++ SF QFQ ++
Sbjct: 442 WAEDVDPGAVAGLASRRTYPLRSSFRPSYNMAVNLVGQV-GRERAHALLEASFAQFQADR 500

Query: 542 ALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKLMSEITRPERVLYY 598
           A+  + +++ + E   A    + +    + AEY  L+ +++ +E     E  +  R    
Sbjct: 501 AVVGLTRQIRRNEATLAEYQRAMQCHLGDFAEYAALRRELSDVEAAASRETAQLRRA--- 557

Query: 599 LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRG--GGYIVPV---------QLP 647
             +  L+++R G        +V +      G+  +   G  GG   PV         +L 
Sbjct: 558 AAAESLLRLRPGD-------IVALPMGRRGGLAVVLDTGLIGGEARPVVLTEERRVKRLT 610

Query: 648 LISTLSKI----RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEV 703
           ++     I    RL +P    P  A     LA   L SR   G      V     E    
Sbjct: 611 VVDVRGPIEPVGRLRIPRSFNPRSAADRRDLAAG-LRSRQRDG------VLAAHRERRTA 663

Query: 704 VDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFR 760
                +I +L   L  HP +   D E   R   R  ++  EI+ L+ ++  R   + +  
Sbjct: 664 TGYEERIADLRAALRRHPCHGCTDREEHARWANRSWQLEREIETLRRRVEGRTGSLARTF 723

Query: 761 DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
           D + +   VL  LG++  + V +  GR    + T  +L+  E +  G ++ L   ++A  
Sbjct: 724 DRVCD---VLGDLGYLAGEDVTE-DGRRLARLYTELDLVAAECLRRGVWSGLTPAELAGA 779

Query: 821 ASCFIPVDKSSEQINLRM---ELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            +  +   +  E   +R+    LA+   +  +  R + E++   +L    +        P
Sbjct: 780 VAVLVYEPREDEPAVVRLPAGRLAEACARTIDVWRDLTEVEQRHRLNFLREPS------P 833

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
             +   Y W++GA    ++   D+  G  +R  R+L + L Q+  AA      +L    A
Sbjct: 834 RFVTAAYRWARGADLETILVEQDMSAGDFVRWTRQLVDLLGQIEQAADG----DLRAVAA 889

Query: 938 AASESLRRGIM 948
           AA+ SLRRG++
Sbjct: 890 AAAGSLRRGVV 900


>gi|428778819|ref|YP_007170605.1| superfamily II RNA helicase [Dactylococcopsis salina PCC 8305]
 gi|428693098|gb|AFZ49248.1| superfamily II RNA helicase [Dactylococcopsis salina PCC 8305]
          Length = 884

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 287/898 (31%), Positives = 465/898 (51%), Gaps = 97/898 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQ  ++  L+  +SV+VS  T +GKT V EYAI  A    +RV YT+P
Sbjct: 9   DLKTLFPFELDNFQVRAITALDAKKSVVVSVPTGSGKTLVGEYAIHRALAKGKRVFYTTP 68

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS--EV---L 180
           LKALSNQK R+  + F  + VGL+TGDV+++ +A  +VMTTEI R MLY  S  EV   L
Sbjct: 69  LKALSNQKLRDFQETFGEEQVGLLTGDVSVNRDAGVVVMTTEIFRNMLYGTSIGEVGTSL 128

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
           + V  V+ DE HYM D  RG VWEESII+ P +I++V LSAT++NA Q  +WI  +H  P
Sbjct: 129 ENVEAVVLDECHYMNDPNRGTVWEESIIYCPKSIQLVALSATIANAGQLTDWINEIHG-P 187

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK 300
             ++ +DFRP PL+ Y   +   GL+ +++E++        K+ ++ LK K  GR+    
Sbjct: 188 TELIKSDFRPVPLEFYFSTL--KGLFPLLNEQK-------TKM-NSRLKPKQKGRK---- 233

Query: 301 ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
              R++K    S    I  +V+ +  R+  P I F FSRR C+Q    +++L   T EEK
Sbjct: 234 --IRISK----SDCPTIDLVVEQLATRELLPAIYFIFSRRGCDQSVQQLNRLSLVTPEEK 287

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             +++  Q  +    E  R+       +  LKRG+A HH+G+LP  K LVE LF  GLVK
Sbjct: 288 AQIQEHLQRFLAQHPEGARSG-----QIEPLKRGVASHHAGVLPAWKGLVEELFTRGLVK 342

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG--IC 478
            +FATET A G+NMPA+T V +++ K     HR + + E++QMSGRAGRRG D RG  +C
Sbjct: 343 VVFATETLAAGVNMPARTTVISSLSKRTDQGHRLLRASEFLQMSGRAGRRGMDQRGNVVC 402

Query: 479 IIMVDEQMEMNTLKD---MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           +     Q      K+   +   +  PLVS F  +Y  +LNL+ R   Q  A+ +++ SF 
Sbjct: 403 V-----QTRFEGAKEAAYLATRESDPLVSQFTPTYGMVLNLLQRQTIQ-EAKSLLQRSFA 456

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKLKLDIAQLEKKLMSEITR 591
           Q+     L    K +++L +E A +D        A   +Y KL+  + + EK+++  + +
Sbjct: 457 QYLANLKLIPEQKAIAQLTQEIARIDVQIAPIPRAYFNQYEKLQAHLKE-EKRILKYLDK 515

Query: 592 -PERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-PSAGVGTLPSRGGGYIV------- 642
             +R      S  + ++R G   +  G  V V    P+  V T  S G   ++       
Sbjct: 516 QAQRDRTPALSAAISQLRSGDLLFLKGKYVTVSSPLPAVLVQTTGSPGQSSLLICLAADN 575

Query: 643 --------------PVQLPLISTLSKIRLSVPPDL--RPLDARQSILLAVQELESRFPQG 686
                          V LP  S  S I L  PPDL  +P   R+       E+ +   Q 
Sbjct: 576 RWYVATERDVSAIGEVLLPE-SYFSSIDL--PPDLEIKPGKRRKG-----DEITAEIAQ- 626

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQ 745
             ++  V+    + PEV     +I++++ ++ +HPL +  Q +  ++ + R+ ++  E++
Sbjct: 627 --RMEEVEIPDTDAPEVAAQKEKIKDIQQRMSSHPLQQWGQPKQLLKTYSRRQQLEEELE 684

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           + ++  R++Q Q +R E  +   VL+  G ++      L G+ A  I   +EL +   + 
Sbjct: 685 RHQANTRENQSQHWR-EFLDICEVLETFGALEKYQPTSL-GQTAAAIRGDNELWLGLALR 742

Query: 806 NGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
           +G F++L    +AA  S  I   P   S       M +   L +L+   R++ ++Q   +
Sbjct: 743 SGHFDELSPAYLAAACSALITETPRPDSESDFPPPMPVINALSELRGIRRELFQVQRRNR 802

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           + + +       + P L+ ++  W +G  + ++   T + EG ++R  RR  +FL+Q+
Sbjct: 803 VAIPL------WLEPDLIGLVEQWVEGIEWQDLCDATSLDEGDLVRILRRSRDFLSQI 854


>gi|326773350|ref|ZP_08232633.1| ATP-dependent RNA helicase [Actinomyces viscosus C505]
 gi|326636580|gb|EGE37483.1| ATP-dependent RNA helicase [Actinomyces viscosus C505]
          Length = 986

 Score =  374 bits (959), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 289/977 (29%), Positives = 457/977 (46%), Gaps = 117/977 (11%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A+ Y F LDPFQ  +   +ER E VLV+A T AGKT V E+A+ +      +  YT+P+
Sbjct: 25  FAQGYDFPLDPFQEEACGAVERGEGVLVAAPTGAGKTVVGEFAVHLGLARGLKTFYTTPI 84

Query: 129 KALSNQKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           KALSNQKY +L   H + K VGL+TGD +++P+A  +VMTTE+LR MLY GS  L  + +
Sbjct: 85  KALSNQKYLDLVARHGQDK-VGLLTGDTSVNPHADVVVMTTEVLRNMLYSGSRDLDRLGF 143

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP  ++++ LSAT+SNA +F +W+  +  +   VV 
Sbjct: 144 VVMDEVHYLADRFRGPVWEEVIIHLPAEVQVISLSATVSNAEEFGDWLGQVRGRTA-VVV 202

Query: 246 TDFRPTPL-QH----------YVFPVGGSGLYLVVDEKEQFREDNFVK------LQDTFL 288
           ++ RP PL QH          Y  P         +D+ EQ   +   +      L    L
Sbjct: 203 SEERPVPLTQHMMVGRRLLPLYSHPAEAPEHSDQLDQSEQTEPERQAEQTGQPPLNPELL 262

Query: 289 K-------------QKIGGRRENGKASGR-------MAKGGS----GSGGSDI------- 317
           K                   R  G  S R        A+GG     G GG+         
Sbjct: 263 KAVKQARRAAASGGASKNSYRGGGGGSARGTQPWKRSARGGRAPRRGEGGARTARLKPPS 322

Query: 318 -FKIVKMIMERKFQPVIVFSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
             ++V  +   +  P IVF FSR  CEQ  H +  + +D  T+ E   + +V +     +
Sbjct: 323 RLQVVTALEGARLLPAIVFVFSRAGCEQAVHQVVSAGVDLTTEAEAARIREVIERRTADI 382

Query: 375 NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
              D  +         L+RG+A HH+GLLPV KE VE LF  GLVK ++ATET A+G+NM
Sbjct: 383 PVSDLGVLGFHFWAHALERGVAAHHAGLLPVFKETVEELFSAGLVKVVYATETLALGINM 442

Query: 435 PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
           PA+TVV  +++KW+G +H  +  GEY Q++GRAGRRG D  G  +++  + +E  T+  +
Sbjct: 443 PARTVVLESLRKWNGSAHVTLSPGEYTQLTGRAGRRGIDVEGHAVVLAADDVEPATVSSL 502

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
              +  PLVS FR +Y   +NL+ R   +     V++ SF QFQ ++ + ++  +  +  
Sbjct: 503 ASRRTYPLVSAFRPTYNMAVNLLERMP-RMRVREVLEQSFAQFQADRGVVELAAQARRKR 561

Query: 555 EEAASLDASGEAEVA---EYHKLKLDIAQLEKKLM---SEITRPE--RVLYYLGSGRLIK 606
                L+      +    EY  L+  IA  E  L    S   R E  R +  LG G +I 
Sbjct: 562 RSLEGLEKDMTCRLGDFREYASLRQAIADAEADLSRDKSAARRSETGRTMSSLGRGDVIV 621

Query: 607 VREG-----------GTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKI 655
            R+G           G D      + V+ + +  V   P        P  +  +  L ++
Sbjct: 622 FRKGRRRRHGIVLQVGADRTGTPTITVLGEDARVVALTPD-----TAPDGVMRVGAL-RV 675

Query: 656 RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
             SV P  RP D  + +   V  L +   +G                    +  +E L H
Sbjct: 676 ADSVDPH-RPRDRDRLVQRLVDALRAGDLEG-SGRRTRTRSSRARARRDSAIENLERLRH 733

Query: 716 KLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKK 772
           ++ +HP +   D E   R  ++ +    E ++L+ ++  R   I +  D +     VL +
Sbjct: 734 EMRSHPCHGCPDREEHARVGRKWSRAKTEAERLQRRIETRTGTIARLFDAV---CEVLLE 790

Query: 773 L--------GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA-ALASC 823
           L        GH + +  V   G+    I    +LL+ E +  G F DL   ++A AL++C
Sbjct: 791 LGYLRPVDRGHPERELRVTGAGKVLARIYAERDLLIAECLRTGVFEDLSAAELAGALSAC 850

Query: 824 FIPVDKSSEQINLRMELAKPLQQLQES----ARKIAEIQNECKLEVNVDEYVESTVRPFL 879
                 S++ I L +     L Q   +    + +I ++++  ++  +      S   P L
Sbjct: 851 VYEPRLSAQSIGLPVAPGSRLGQCLRAQLGVSHRIHDLESLARIAAS------SGAEPAL 904

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA--------QAVGEVN 931
              +  W  GA  A+++  T++  G  +R  ++L + + Q+ + +        QA    +
Sbjct: 905 AGAVQAWCDGAQLADILDATELTAGDFVRWCKQLLDVVGQIASLSPPPDATPEQARAVTD 964

Query: 932 LEKKFAAASESLRRGIM 948
           L  + A AS  L RG++
Sbjct: 965 LSMRAAEASLDLNRGVV 981


>gi|17227985|ref|NP_484533.1| hypothetical protein alr0489 [Nostoc sp. PCC 7120]
 gi|17129834|dbj|BAB72447.1| alr0489 [Nostoc sp. PCC 7120]
          Length = 893

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 275/903 (30%), Positives = 462/903 (51%), Gaps = 83/903 (9%)

Query: 59  TFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
            +  P    ++   + F+LD FQ+ ++A L    SV+V A T +GKT V EYAI  A   
Sbjct: 2   NYPAPSPELDLGLIFPFDLDQFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALTR 61

Query: 119 KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
            +RV YT+PLKALSNQK R+  ++F  + VGL+TGD +++ +A  LVMTTEI R MLY G
Sbjct: 62  GKRVFYTTPLKALSNQKLRDFREKFGFEQVGLLTGDASINRDAPILVMTTEIFRNMLY-G 120

Query: 177 SEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFA 230
           + +      L +V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  
Sbjct: 121 TPIGQVGISLVDVEAVVLDECHYMNDRQRGTVWEESIIYCPRGVQLVALSATVANSDQLT 180

Query: 231 EWICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK 289
           +W+  +H  P  ++Y+DFRP PL+ HY  P    GL+ ++++                 K
Sbjct: 181 DWLSRVHG-PTDLIYSDFRPVPLEFHYCNP---KGLFPLLNDS----------------K 220

Query: 290 QKIGGRREN--GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
            KI  R  N   K  G   K G     S I+ +   + +R   P I F FSRR C++   
Sbjct: 221 TKINPRLANRGKKRQGDRGKNGRPEAPSLIYTL-NHLQQRDMLPAIYFIFSRRGCDKAVA 279

Query: 348 SMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
            +  L     EE     Q+ +  +D     +        + PL  RG+A HH+G+LP  K
Sbjct: 280 EVGDLWLVNNEES----QILRRQIDDFLARNPEAGRSGQIAPLY-RGVAAHHAGILPAWK 334

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
            LVE LFQ+GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRA
Sbjct: 335 VLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDTGHRLLNASEFLQMAGRA 394

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D +G  + +            +   KP PLVS F  SY  +LNL+ +      A+
Sbjct: 395 GRRGMDKQGHVVTVQTPFEGSKEAAYLATSKPDPLVSQFTPSYGMVLNLL-QTHTIDEAK 453

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASL----DASGEAEVAEYHKLKLDIAQLEK 583
            +I+ SF Q+     L    ++++ LE E A L    +A  E ++  Y KL+  + ++E+
Sbjct: 454 ELIERSFGQYMATLHLRPDYEEIAALEGELAKLQEQINAVDENDILIYEKLRQRL-KVER 512

Query: 584 KLMSEITRP---------ERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT-- 632
           +L+  +            + +L +   G L+ ++         +   +V K S    +  
Sbjct: 513 QLLKTLQEQAQEERQEQIKMLLDFAVLGTLLSLKGQNFKVSTPITAVLVGKTSGSTQSAC 572

Query: 633 --LPSRGGGYIVPVQLPLISTLSKI-RLSVPPDLRP-----LDARQSILLAVQELESRFP 684
                +   + V     ++   +++ R+ VPPD+ P     L   QS   A + +     
Sbjct: 573 LVCLGQDNRWYVAATADVVDLYAELPRVDVPPDILPPPELMLKPGQSSRGAKETMA--IA 630

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHE 743
           Q +P  +P + + +  PEV + +++   ++ +L A+PL++S + + + +   R  E+  E
Sbjct: 631 QSIP--DPQQSLHLS-PEVAEQLSRTAAIQAQLEANPLHQSGNVSMVFKARARYVELEAE 687

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
           ++++++++ + Q Q++ +E  N   +L++   +D + V    G+ A  I   +EL +   
Sbjct: 688 LEEIQAQV-EQQSQRYWEEFLNLITILQQFDCLD-NLVPTALGQIAAAIRGENELWLGLA 745

Query: 804 MFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
           + +G  N+LD H +AA  +  +   P   S    NL  E+     +LQ++ R + ++Q  
Sbjct: 746 LASGELNNLDPHHLAATIAALVTETPRPDSRVNFNLSPEIDDAWSRLQKTRRAVLKVQYR 805

Query: 861 CKLEVNV---DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
             + + V   + Y+       L+ ++  W+ G  + E+ Q T + EG ++R  RR  + L
Sbjct: 806 HGVALPVGLENRYIG------LIALVEQWALGIEWVELCQNTTLDEGDVVRILRRSLDLL 859

Query: 918 NQL 920
           +Q+
Sbjct: 860 SQI 862


>gi|340502201|gb|EGR28913.1| hypothetical protein IMG5_167070 [Ichthyophthirius multifiliis]
          Length = 639

 Score =  373 bits (958), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 195/446 (43%), Positives = 280/446 (62%), Gaps = 30/446 (6%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           MA  Y FELD FQ+ +V  LE +ESV V AHTSAGKT +AEYAIA+A +  ++ IYTSP+
Sbjct: 1   MAIQYPFELDVFQKRAVLRLEEDESVFVCAHTSAGKTVIAEYAIALAQKKNRKAIYTSPI 60

Query: 129 KALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           KALSNQKYR+   +F  DVG++TGDV+L+P A+CL++TTE+LR MLY+G +++++++WVI
Sbjct: 61  KALSNQKYRDFKSKFGDDVGIVTGDVSLNPTANCLIVTTEVLRNMLYKGHDIIRDISWVI 120

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ ++ERGVVWEE+II LP +I +V LSAT  N   FA W+    K+  +V  T 
Sbjct: 121 FDEVHYVNNQERGVVWEETIIMLPESIGLVMLSATAPNYMDFANWVGRTKKRTIYVQKTL 180

Query: 248 FRPTPLQH--YVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
           +RP PLQH  Y+F       +++ ++ E+F    +  L++   K       +N K S  +
Sbjct: 181 YRPVPLQHSIYIF----EQFHVIKEKDEKFSIQEYDNLKNQIKKA------QNLKNSINL 230

Query: 306 AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE------ 359
            +  + S    I K++ +   +   P +VF FS+ +  + +  +  + F T EE      
Sbjct: 231 NRQQNQSELEAIRKLLYICENQNLLPCVVFVFSKNKILELSEGLGNITFCTIEEQVKIKQ 290

Query: 360 -----------KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
                      K  +E+ F  A   +N  D  +P I+    LL RGIAVHH  ++P IKE
Sbjct: 291 KNIMFIQQNIKKRFIEKTFNQAAMKINFRDIRVPQIQKTKDLLTRGIAVHHGDVIPFIKE 350

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           +VE+LF +GL+K LFATETFAMG+NMP KTV+F +  K DG + R + S EY QMSGRAG
Sbjct: 351 IVEILFSKGLIKVLFATETFAMGINMPTKTVIFHSTSKHDGFNLRMLNSSEYTQMSGRAG 410

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDM 494
           RR  DD+G  II + +  ++ T  D+
Sbjct: 411 RRSLDDKGTVIIFIQDLNKLPTRIDL 436



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 24/213 (11%)

Query: 761 DELKNRSRVLKKLGH--IDAD-GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           ++L  R  + K L H  ID D     LK R A  I     + VTE++ +G F+ LD +++
Sbjct: 428 NKLPTRIDLEKMLDHKYIDKDYSKPLLKARVAKEIQN---IYVTEVLVSGAFDYLDEYEL 484

Query: 818 AALASCFI-----------PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
            AL S F+           P D     +    E  +  +Q  E    ++ ++ E    + 
Sbjct: 485 TALLSVFVCQGKAKGQKYDPEDDYETGLTYCPEFIRAYKQAMEIT--LSTVEQEIFFGII 542

Query: 867 V----DEYVESTV-RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           V    ++Y++  +    L+ V+Y W  GA    V Q T   EGSI+R   RL+  LN ++
Sbjct: 543 VTNSAEQYLKDNIFNQDLVKVVYSWMHGADLLHVCQFTTYQEGSIVRCFLRLENLLNNVK 602

Query: 922 AAAQAVGEVNLEKKFAAASESLRRGIMFSNSLY 954
           +AA  +G+ +L  K  ++ E L + I+F  SLY
Sbjct: 603 SAAIILGDNHLAMKVDSSRELLVKDIVFQQSLY 635


>gi|427739317|ref|YP_007058861.1| superfamily II RNA helicase [Rivularia sp. PCC 7116]
 gi|427374358|gb|AFY58314.1| superfamily II RNA helicase [Rivularia sp. PCC 7116]
          Length = 889

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 288/898 (32%), Positives = 461/898 (51%), Gaps = 81/898 (9%)

Query: 62  NPVYNGEM--AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
           NP    ++  +  +SFELD FQ  ++A L    SV+V A T +GKT + EYAI  A    
Sbjct: 3   NPALTSDVDPSSVFSFELDQFQHDAIASLNAGRSVVVCAPTGSGKTLIGEYAIYRALARG 62

Query: 120 QRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS 177
           +RV YT+PLKALSNQK R+   EF    VGL+TGD +++ +A  LVMTTEI R MLY G+
Sbjct: 63  KRVFYTTPLKALSNQKLRDFRSEFGFDSVGLLTGDASINRDAPILVMTTEIFRNMLY-GT 121

Query: 178 EV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAE 231
            +      L +V  V+ DE HYM DR+RG VWEESII+ P +I++V LSAT+ N+ Q  +
Sbjct: 122 PIGQVGTSLIDVEAVVLDECHYMNDRQRGTVWEESIIYCPESIQLVALSATVDNSDQLTD 181

Query: 232 WICHLHKQPCHVVYTDFRPTPLQHYVFPVGGS-GLYLVVDEKEQFREDNFVKLQDTFLKQ 290
           W+  +H  P  ++Y+D+RP PL    F  G S GL+ +++E++        +L    +K+
Sbjct: 182 WLNQVHG-PTDLIYSDYRPVPLD---FHFGNSKGLFPLLNEEK-------TQLNHRLVKR 230

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
           K    R+ G  S ++A+  S     DI  +++ + +R   P I F FSRR C++    + 
Sbjct: 231 K----RKRGDKSKQIARQES----PDISYVLEHLRQRDMLPAIYFIFSRRGCDRAVAEVG 282

Query: 351 KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
            L     +E     Q  +  +D     + +      + PL  RGIA HH+G+LP  K LV
Sbjct: 283 DLWLVDGDEA----QRLRPQIDEFLTRNPDAGRAGHVGPLY-RGIAAHHAGILPAWKTLV 337

Query: 411 ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
           E LFQ+GL+K +FATET A G+NMPA+T V + + K     HR +   E++QM+GRAGRR
Sbjct: 338 EELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDSGHRLLNPSEFLQMAGRAGRR 397

Query: 471 GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
           G D+ G  + +            +    P PLVS F  SY  +LNL+     +  A+ +I
Sbjct: 398 GMDEVGYVVTLQTPFEGSKEAGYLATSHPDPLVSQFSPSYGMVLNLLQTHTLE-EAKELI 456

Query: 531 KNSFHQFQYEKALPDIGKKVSKLEEEAASL-----DASGEAEVAEYHKLKLDIAQLEKKL 585
           + SF Q+     L    K++++ ++  A +     D S E EVA+Y KL+  + ++E+KL
Sbjct: 457 ERSFGQYLANLHLQPEYKRIAEFKQHLAQIQTKIADVSAE-EVAKYEKLRQRL-KVERKL 514

Query: 586 MSEI------TRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVV-KKPSAGVGTLPS 635
           ++ +      TR E +   L +  SG L+ ++    ++   +   +V K P      L  
Sbjct: 515 LTTLQEQAAETRKEELSMMLSFAVSGTLLSIKGDNAEFSAPITAVLVGKTPGNETPFLVC 574

Query: 636 RGGG---YIVPVQLPLISTLSKI-RLSVPPDLRP-----LDARQSILLAVQELESRFPQG 686
            G     Y+  V   +I   ++I R+ + PDL P     L   QS   +  E+       
Sbjct: 575 LGKNNRWYVTSVN-DVIDLYAQIPRIDISPDLLPPSQLLLKPGQSC--SGDEITEAIAAQ 631

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA-EVNHEIQ 745
           +P+     D     PEVV+ +  + +++ +L + PL    +   I   Q +A E+  EIQ
Sbjct: 632 IPE---APDDSFMAPEVVEQLRVVTDVQEQLESSPLYGLGNAASIYKRQARAVELEAEIQ 688

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           +L+S++ + Q Q+  DE      +L+     D     +L G+ A  I   +EL +  ++ 
Sbjct: 689 ELRSQV-EQQSQRHWDEFITLIEILQYFDAFDNLVPTEL-GQMAAAIRGENELWLGLVLN 746

Query: 806 NGTFNDL-DHHQVAALASCFIPVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECK 862
           +G  + L  HH   A+A+      +   ++   L  E+A  L  L+   RK+ ++Q    
Sbjct: 747 SGNLDGLAPHHFATAVAALVTETSRPDSRVFFELSSEVADALASLRPIRRKVFQLQRRYG 806

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           + + V    E      L+ ++  W+ G  + E+ + T + EG ++R  RR  + L+Q+
Sbjct: 807 VALPVWLEFE------LITLVEQWALGMDWVEICENTTLDEGDVVRILRRTLDLLSQI 858


>gi|296269793|ref|YP_003652425.1| DSH domain-containing protein [Thermobispora bispora DSM 43833]
 gi|296092580|gb|ADG88532.1| DSH domain protein [Thermobispora bispora DSM 43833]
          Length = 904

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 288/923 (31%), Positives = 466/923 (50%), Gaps = 90/923 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FE D FQ  +   LE  + VLV+A T +GKT V E+A+ +A R  ++  YT+P+KALS
Sbjct: 29  YDFEFDEFQLDACRALEAGDGVLVAAPTGSGKTVVGEFAVHLALRQGRKCFYTTPIKALS 88

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS  L  +A+V+ DE
Sbjct: 89  NQKYNDLVRRYGAAKVGLLTGDNSINGEAPVVVMTTEVLRNMLYAGSSTLSGLAYVVMDE 148

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++++V LSAT+SNA +F EW+  + +    V+  + RP
Sbjct: 149 VHYLADRFRGAVWEEVIIHLPESVRLVALSATVSNAEEFGEWLGEV-RGDTTVIVDEHRP 207

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQ---DTFLKQKIGGRRENGKASGRMAK 307
            PL  ++  VG     L V  ++  +  N   L+   D   + ++ G+R   +  GR+  
Sbjct: 208 VPLWQHML-VGNRLYDLFVTGRDGVQRVNPALLRISRDEARRAQLRGKRGYAR-PGRLRP 265

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEKDTVEQ 365
                      ++++ +      P I F FSR  C+   M    + +   T EE++ + +
Sbjct: 266 PSRP-------EVIERLDAAGLLPAITFIFSRAGCDAAVMQCRYAGIRLTTDEEREEIRR 318

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
           +       L EED  +         L+RGIA HH+G+LP  KE+VE LF +GLVKA+FAT
Sbjct: 319 IADERTAFLPEEDLAVLGYLEWRECLERGIAAHHAGMLPTFKEIVEELFTKGLVKAVFAT 378

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A+G+NMPA++VV   + KW+G++H  +  GEY Q+ GRAGRRG D  G  +++    
Sbjct: 379 ETLALGINMPARSVVIEKLDKWNGETHADLTPGEYTQLIGRAGRRGIDVEGHAVVIWQPG 438

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           M+   +  +   +  PL S+F+ SY   +NL+ +  G+  A  ++++SF QFQ ++A+  
Sbjct: 439 MDPIGVARLAGTRTYPLRSSFQPSYNMAVNLVGQV-GRERARLLLEDSFAQFQADRAVVG 497

Query: 546 IGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKL-----MSEITRPER 594
           + +++ K EE   +L+   +A      +  EY + +  +++ E +L     M+   +  R
Sbjct: 498 LARQLRKAEE---ALEGYRQAMTCHLGDFQEYAEFRRRLSEREAELARQRGMARRAQTLR 554

Query: 595 VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSK 654
            L  L  G +I+V  GG   G    V VV  P         RGGG       PL+ T++K
Sbjct: 555 SLEALRPGDVIRV-PGGRRAG----VAVVLDPG-----FNGRGGG-----PNPLVLTINK 599

Query: 655 I-----------------RLSVPPDLRPLDARQSILLAVQELESRF-PQGLPKLNPVKDM 696
                             R+ +P +     A+    L V  L ++   + L K   V+D 
Sbjct: 600 QVKRLTPTDFAVPVEPVERVRIPKNFNARSAKDRADL-VSSLRAKIGGRDLGKPPRVRDH 658

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKM--RD 753
             ED E       I  L  +L  HP +  S+ E+  R  +R  ++  E + L+ ++  R 
Sbjct: 659 AAEDEE-------ITRLRRELRRHPCHGCSEREDHARWAERYYKLLRETEALRRRIEGRS 711

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
             I +  D +     VL++LG+++ + V     R A L    D LL  E +  G +  LD
Sbjct: 712 HVIARTFDRVCG---VLERLGYLEGETVTSEGWRLAKLYTELD-LLTAECLRAGIWERLD 767

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQ-LQESARKIAEIQNECKLEVNVDEYVE 872
             ++AA  S  +   +  +        A P++  L E  R   E++     E+  +  + 
Sbjct: 768 PAELAACVSSLVYESRQPDDGRRPRLPAGPVRDALAEMTRLWGELE-----EIEQEHGLS 822

Query: 873 STVRPFLMDV--IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
            T  P L  V   Y W+KG    +V+  TD+  G  +R  +++ + L+QL+  A   G V
Sbjct: 823 FTREPDLGFVWAAYRWAKGCGLEDVLTETDLAAGDFVRWVKQILDLLDQLKEVAPEGGTV 882

Query: 931 NLEKKFAAASESLRRGIMFSNSL 953
              +    A +++RRG++   S+
Sbjct: 883 R--QNAIKAMDAMRRGVVAYASV 903


>gi|281209371|gb|EFA83539.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
          Length = 990

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/544 (37%), Positives = 327/544 (60%), Gaps = 35/544 (6%)

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
           V+K+DG+S R++  GEYIQMSGRAGRRG D+RGI I+MVDE+ME    K MV G+   L 
Sbjct: 450 VRKFDGESQRWVTGGEYIQMSGRAGRRGLDERGIVIMMVDEKMEPVVAKGMVKGQADRLT 509

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS 563
           S+F + Y  +LN+M R E     E ++K SFHQ+Q E  +P + +K+++LE+E  ++   
Sbjct: 510 SSFWIGYSMLLNMM-RVE-DIDPESLLKRSFHQYQQESLIPQLNQKITQLEKEKTTIVIK 567

Query: 564 GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVV 623
            E  V EY  L+L +A+L+  +   I +P  V  YL  GR+++VR+   DWG+GVV+N  
Sbjct: 568 DEQVVQEYLNLRLQLAKLKDGMRDFINQPSYVQPYLQPGRIVRVRDENLDWGYGVVLNFY 627

Query: 624 KKP---------------------SAGVGT---LPSRGGG--YIVPVQLPLISTLSKIRL 657
           ++                      +  + T    P+   G   I+PV + L   ++ + L
Sbjct: 628 RRSVKQGVSDQTFEIVTDMLLNTDATSIATPKPCPANETGEPQIIPVSIKLFDGITSVCL 687

Query: 658 SVPPDLRPLDARQSILLAVQELESRFPQ--GLPKLNPVKDMKIEDPEVVDLVNQIEELEH 715
           ++  DL P D +  +   ++E ++RF +  GLP ++P++DM+I D     L+ +IE LE 
Sbjct: 688 NIKKDLSPNDLKPHVYKMLREADNRFKKEGGLPLIDPIEDMRITDANFKKLIRKIETLEA 747

Query: 716 KLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLG 774
           +L      K  D E +    Q+K E++ E++ L+ K+R+      +D+L+   R+LK+L 
Sbjct: 748 RLVGTAGFKDSDIEERTEQLQKKNEIDKEVKLLRKKIREGDEIILKDDLRAMKRILKRLD 807

Query: 775 HIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQI 834
           +I+A+ VVQ+KGR A  I  GDEL+++EL+F G FNDL   Q  A+ S F+   +    +
Sbjct: 808 YINAEDVVQVKGRVASEISAGDELVISELLFMGLFNDLTVEQCVAVFSVFVFQSEGGGDV 867

Query: 835 N---LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGAT 891
           N   ++ +LA   + +Q++AR+I ++  ECKL ++  EY+ +   P  MDV + W+ GA+
Sbjct: 868 NNAKIKPDLAPLFRSIQDTARRIVQVSQECKLTIDEKEYL-NRFNPHFMDVAFAWANGAS 926

Query: 892 FAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
           FAE+ +MT+ FEG+IIRS RRLDE L Q+  A++++G  +LE KF++A   ++R I F+ 
Sbjct: 927 FAEICKMTETFEGNIIRSIRRLDELLRQMVVASKSIGNNDLEVKFSSAIVKIKRDIPFAG 986

Query: 952 SLYL 955
           SLYL
Sbjct: 987 SLYL 990



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 150/318 (47%), Positives = 202/318 (63%), Gaps = 27/318 (8%)

Query: 33  NLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNE 92
           +L ++C HEV +P  Y +  D  ++    NP    + A+TY F+LDPFQ  SVAC+ER E
Sbjct: 189 SLPKTCTHEVLLPPDY-IDNDPDLY----NPKEPVKPARTYPFKLDPFQATSVACIERKE 243

Query: 93  SVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGD 152
           SVLVSAHTSAGKT VAEY+IA+A R+ QRVIYTSP+KALSNQKYR+L+  F+DVGLMTGD
Sbjct: 244 SVLVSAHTSAGKTVVAEYSIAVALREGQRVIYTSPIKALSNQKYRDLNDTFQDVGLMTGD 303

Query: 153 VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
           +T++PNASCLVMTTEILR MLYRGSE+++EVAWVIFDEIHY++D+ERGVVWEE+II LP 
Sbjct: 304 ITINPNASCLVMTTEILRSMLYRGSELMREVAWVIFDEIHYLRDKERGVVWEETIILLPD 363

Query: 213 AIKM-------VFLSATMSNATQFAEWICHLHKQ--PCHVVY--TDFRPTPLQHYVFPVG 261
            +K+       ++L      +        H+ +   P   V+  TD R    + Y     
Sbjct: 364 TVKVSSDSTATLYLPVGWRRSAFGGRRKRHVQRGELPKVAVWLGTD-RAWQEEAY----A 418

Query: 262 GSGLYLVVDEKEQFRED----NFVKLQDTFLKQKIGGRRENGKASGRMAK--GGSGSGGS 315
              + L+ D K+ + E     N ++ Q   L +K  G  +     G   +  G +G  G 
Sbjct: 419 ERTVRLLQDRKDDYGEKLSARNCIQFQQEGLVRKFDGESQRWVTGGEYIQMSGRAGRRGL 478

Query: 316 DIFKIVKMIMERKFQPVI 333
           D   IV M+++ K +PV+
Sbjct: 479 DERGIVIMMVDEKMEPVV 496


>gi|365827302|ref|ZP_09369166.1| hypothetical protein HMPREF0975_00949 [Actinomyces sp. oral taxon
           849 str. F0330]
 gi|365265308|gb|EHM95081.1| hypothetical protein HMPREF0975_00949 [Actinomyces sp. oral taxon
           849 str. F0330]
          Length = 982

 Score =  372 bits (954), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 280/947 (29%), Positives = 451/947 (47%), Gaps = 125/947 (13%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A+ Y F LDPFQ  + A +ER E VLV+A T AGKT V E+A+ +      +  YT+P+
Sbjct: 25  FARGYDFPLDPFQEEACAAVERGEGVLVAAPTGAGKTVVGEFAVHLGLARGHKAFYTTPI 84

Query: 129 KALSNQKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           KALSNQKY +L   H E + VGL+TGD +++P+A  +VMTTE+LR MLY GS  L  + +
Sbjct: 85  KALSNQKYLDLVARHGE-EHVGLLTGDTSVNPHADVVVMTTEVLRNMLYSGSRDLDRLGF 143

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP  ++++ LSAT+SNA +F +W+  +  +   VV 
Sbjct: 144 VVMDEVHYLADRFRGPVWEEVIIHLPAEVQVISLSATVSNAEEFGDWLGQVRGRTA-VVV 202

Query: 246 TDFRPTPL-QH----------YVFPV------GGSGLYLVVDEKEQFREDNFVKLQDTFL 288
           ++ RP PL QH          Y  P+      G +G      E EQ  +     L    L
Sbjct: 203 SEKRPVPLTQHMMVGRRLLPLYSRPIDVAELTGAAG----TAESEQSEQAAQPPLNPELL 258

Query: 289 KQKIGGRRE-----NGKASGRMAKGGS-------------------GSGGSDI------- 317
           K     RR      + K S R   GGS                   G GG+         
Sbjct: 259 KAVKQARRAAASGGSSKNSYRSRGGGSARGPQPWKRSAGGARAPRRGEGGARTARLKPPS 318

Query: 318 -FKIVKMIMERKFQPVIVFSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCL 374
             ++VK +   +  P IVF FSR  CEQ  + +  + +D  T+ E   + +V +     +
Sbjct: 319 RLQVVKALEAARLLPAIVFVFSRAGCEQAVNQVVSTGVDLTTEAEAARIREVIERRTADI 378

Query: 375 NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
              D  +         L+RG+A HH+GLLPV KE VE LF  GLVK ++ATET A+G+NM
Sbjct: 379 PAGDLGVLGFRFWAHALERGVAAHHAGLLPVFKETVEELFSAGLVKVVYATETLALGINM 438

Query: 435 PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
           PA+TVV  +++KW+G +H  +  GEY Q++GRAGRRG D  G  +++  + +E  T+  +
Sbjct: 439 PARTVVLESLRKWNGSAHVTLSPGEYTQLTGRAGRRGIDIEGHAVVLATDDLEPATVSSL 498

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
              +  PLVS FR +Y   +NL+ R   +  A  V++ SF QFQ ++ + ++  +  +  
Sbjct: 499 ASRRTYPLVSAFRPTYNMAVNLLERMP-RARAREVLEESFAQFQADRGVVELAAQARRKR 557

Query: 555 EEAASLD---ASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGG 611
               SL+   A    +  EY  ++  IA  E    ++++R         +GR +   E G
Sbjct: 558 RSLESLEKDMACRLGDFREYAAIRQAIADAE----ADLSRDRAASRRSEAGRAMSALERG 613

Query: 612 TDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDA-RQ 670
                  VV   +      G +   G        L ++   S++ +++ PD  P    R 
Sbjct: 614 D------VVVFRRGRRRRHGIVLEIGANRTGTPTLTVLGEDSRV-VALTPDTAPDGVMRV 666

Query: 671 SILLAVQELESRFPQGLPKL--NPVKDMKIEDPE-------------------VVDLVNQ 709
             L     ++   P+   +L    V  ++  D E                   +VD    
Sbjct: 667 GALRVADSVDPHRPRDRDRLVQRLVDALRAGDLEEGSPRSRPRSSRAQARRDSIVD---N 723

Query: 710 IEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNR 766
           +E L H + +HP +   D E   R  ++ +    E ++L+ ++  R   I +  D + + 
Sbjct: 724 LERLRHDMRSHPCHGCPDREEHARVGRKWSRAKAEAERLQRRIETRTGTIARLFDAVCD- 782

Query: 767 SRVLKKL--------GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
             +L +L        GH + +  V   G+    I    +LL+ E +  G F  L   ++A
Sbjct: 783 --ILLELGYLQPVDRGHPERELRVTAAGKILARIYAERDLLIAECLRTGVFEGLGVGELA 840

Query: 819 -ALASCFIPVDKSSEQINLRMELAKPLQQLQES----ARKIAEIQNECKLEVNVDEYVES 873
            AL++C      S++ I L +     L Q   +    + ++ ++++  ++E +      S
Sbjct: 841 GALSACVYEPRLSAQSIGLPVAPGSRLGQCLRAQLGVSHRLHDLESLARIEAS------S 894

Query: 874 TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
              P L   +  W  GA  A+++  T++  G  +R  ++L + + Q+
Sbjct: 895 GAEPALAGAVQAWCDGAQLADILDATELTAGDFVRWCKQLLDVVGQI 941


>gi|227496136|ref|ZP_03926442.1| DEAD/DEAH box helicase domain protein [Actinomyces urogenitalis DSM
           15434]
 gi|226834370|gb|EEH66753.1| DEAD/DEAH box helicase domain protein [Actinomyces urogenitalis DSM
           15434]
          Length = 959

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 277/924 (29%), Positives = 454/924 (49%), Gaps = 102/924 (11%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A  Y F LD FQ      +ER E VLV+A T AGKT V E+A+ +     ++  YT+P+
Sbjct: 25  FAAGYDFPLDDFQVAGCQAVERGEGVLVAAPTGAGKTIVGEFAVFLGLAKGRKTFYTTPI 84

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY++L   +    VGL+TGD +++P+A  +VMTTE+LR MLY  S  L  + +V
Sbjct: 85  KALSNQKYQDLAARYGQDKVGLLTGDTSVNPHAEVVVMTTEVLRNMLYSSSRDLDRLGFV 144

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE II L P +++V LSAT+SNA +F +W+ H+  +   VV +
Sbjct: 145 VMDEVHYLADRFRGPVWEEVIIHLDPQVQVVSLSATVSNAEEFGDWLGHVRGKTA-VVVS 203

Query: 247 DFRPTPL-QHYVFPVGGSGLYLVV----DEKEQFREDNFVKLQDTFLKQKI--------- 292
           + RP PL QH +       LY V     D  ++        L    LK            
Sbjct: 204 EHRPVPLTQHMMVGRRLLDLYSVPVALEDAHQEASHAAQPPLNPDLLKAVRSARRAAAGQ 263

Query: 293 ------GGRRENGKASGRMA--KGGSGSGGSDI-----FKIVKMIMERKFQPVIVFSFSR 339
                 G R       G  A  +G  G+  + +       +V  + +    P IVF FSR
Sbjct: 264 AGGYSRGARGGTHDTGGWRAPHRGRDGARSARLRPPSRLAVVDALEQAHLLPAIVFVFSR 323

Query: 340 RECEQHA--MSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
             CEQ    ++ + +D  TQ E + + +V       +   D  +         L+RG A 
Sbjct: 324 AGCEQAVSQLAAAGVDLTTQAEAEQIREVIDRRTSEIPAADLGVLGFHSWAHALQRGYAA 383

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH+GLLPV KE VE LF  GLVK ++ATET A+G+NMPA+TVV  +++KW+G +H  +  
Sbjct: 384 HHAGLLPVFKETVEELFSAGLVKVVYATETLALGINMPARTVVLESLRKWNGSAHVTLTP 443

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           GEY Q++GRAGRRG D  G  +++  + +E   +  +   +  PLVS FR +Y   +NL+
Sbjct: 444 GEYTQLTGRAGRRGIDVEGHAVVLAADDVEPAFVSSLASRRTYPLVSAFRPTYNMAVNLL 503

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD---ASGEAEVAEYHKL 574
           SR+  +  A  V+++SF QFQ ++ + ++  +  +      +L+   A    +  EY +L
Sbjct: 504 SRSS-RARAREVLESSFAQFQADRGVVELAAQARRARRSLGALEEQMACHLGDFREYARL 562

Query: 575 KLDIAQLEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG 629
           +  IA+ E  L  +     R      +  L  G ++  R+G             ++ +  
Sbjct: 563 RQRIAEAEADLSRDKRARRRAEAGRQMEGLARGSVVVFRKGRR-----------QRHAVV 611

Query: 630 VGTLPSRGGGYIVPVQLPLISTL---SKIRLSVPPDLRPLDA-RQSILLAVQELESRFPQ 685
           VGT   R G        P ++ L   SKI  ++ PD  P    R   L     LE R P+
Sbjct: 612 VGTGADRTG-------TPYLTVLGEDSKI-YNLTPDTTPEGVLRVGSLTVAASLEVRRPR 663

Query: 686 GLPKL-----NPVKDMKIED---PE-----VVDLVNQIEELEHKLFAHPLNKS-QDENQI 731
              +L       ++  + E+   PE         V QI++L  ++ +HP +     E   
Sbjct: 664 DRDRLVTRLVEGMRAGRFEEAGRPERGPRASRSAVEQIDQLRRQMRSHPCHACPHREEHA 723

Query: 732 RCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHI--------DADGV 781
           R  ++ A+   + ++L  ++  R   I +  D +    +VL  LG++        D +  
Sbjct: 724 RVGRKWAKAVAQAERLTERIERRTGTIARLFDAV---CQVLVALGYLRPVAQQEPDGELA 780

Query: 782 VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA-ALASCFIPVDKSSEQINLRM-- 838
           V   GR    +    +LL+ + +  G +  L   ++A A+++C      +   ++L +  
Sbjct: 781 VTGAGRVLARVYAERDLLIAQCLRQGVWQGLGSSELAGAVSACVYEPRANVASLSLPVAP 840

Query: 839 --ELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
              L + L+Q  + AR+I +++   +LE++      +   P +   +  W++GA+ A+V+
Sbjct: 841 GSALGRSLRQELDVARRINDLEALARLELS------AGAEPAMAAGVQAWAEGASLAQVL 894

Query: 897 QMTDIFEGSIIRSARRLDEFLNQL 920
           + +++  G  +R +R+L + L QL
Sbjct: 895 EDSEMTAGDFVRWSRQLLDVLGQL 918


>gi|403341578|gb|EJY70097.1| Antiviral helicase SKI2 [Oxytricha trifallax]
          Length = 1300

 Score =  371 bits (952), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 209/527 (39%), Positives = 302/527 (57%), Gaps = 59/527 (11%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  Y FELD FQ+ ++  LE+N+ V V+AHTSAGKT VAEYAIA+AF+   + IYTSP+K
Sbjct: 379 AIEYDFELDDFQKRALYRLEQNKCVFVAAHTSAGKTVVAEYAIALAFKHMTKTIYTSPIK 438

Query: 130 ALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           ALSNQK+R+  ++F DVG+ TGDVTL+ +ASC+VMTTEIL+ MLY  S+ LK+V WVIFD
Sbjct: 439 ALSNQKFRDFKEKFTDVGIKTGDVTLNGSASCVVMTTEILQMMLYNESDFLKDVEWVIFD 498

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ D ERG VWEE I+ LP  I  V LSAT+ N  +FA+W+    K+  +V  T+ R
Sbjct: 499 EVHYINDFERGTVWEEIIMKLPDHISFVMLSATVPNYKEFADWVGRTKKKEIYVQMTEKR 558

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL-----QDTF----------------- 287
           P PLQH +  +      ++ DE      D+  K+     +D+F                 
Sbjct: 559 PVPLQHTL--LYKDKFSVIKDELNNMNRDSLKKILQEEKKDSFKMRDEKNKGIKPKEEKQ 616

Query: 288 ------------LKQKIGGRRENGKASGRM----------------AKGGSGSGGSDIFK 319
                        K+K    +EN      M                ++  S        K
Sbjct: 617 EEAKFEKKKEIDFKEKALKAKENQIKKTAMKAQKSGGNGGGGQGPNSQNKSNKKYEKFHK 676

Query: 320 IVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LDFNTQEEKDTVEQVFQNAVDCLNEED 378
            +  I   K  P +VF FSR  C +    + + L+F T +EK  +++  ++ +  LNE D
Sbjct: 677 YLISISRDKLLPCVVFCFSRAACVEIPNQLQESLEFTTGQEKGEIKKFLKSKLQRLNESD 736

Query: 379 RNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 438
           RNLP I+ +  LL RGI  HH+G+LP++KE+VE+LF +G +K +FAT TFA+GLNMPA++
Sbjct: 737 RNLPQIQNIKSLLIRGIGYHHAGMLPIVKEIVEILFADGYLKVIFATTTFAIGLNMPARS 796

Query: 439 VVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM----EMNTLKDM 494
           V+FT + K++G     + + EY+QM+GRAGRRGKD  G CI+ +D       +    +++
Sbjct: 797 VMFTQLFKFNGTESLILEASEYLQMAGRAGRRGKDTTGTCILTLDRAFGKVPDAEEFEEI 856

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           +  K   L S  +LSY   LN++   +       ++K SF + + EK
Sbjct: 857 LTSKGTHLESKLKLSYQMALNVVKSED--VMINDLLKLSFFENEAEK 901



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 123/238 (51%), Gaps = 17/238 (7%)

Query: 733  CFQRKAEVNH--EIQQLK---SKMRDSQI------QKFRDELKNRSRVLKKLGHIDADGV 781
            CFQ    + H  +I+ LK   S+MR  +       Q+  D+ K + +VL    +ID +  
Sbjct: 1064 CFQCNLVIKHLGQIEALKKYESEMRQCKDLMGAGGQEKLDDFKAKVQVLIHYKYIDYELN 1123

Query: 782  VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCF---IPVDKSSEQINLRM 838
            +  KG+ + LI T ++ L+TEL+F+G   +L++ ++ AL S     +   K+ E      
Sbjct: 1124 MLFKGKVSELI-TNNKFLLTELIFSGLLKELNNEEIIALLSILDTQVGNSKADESDAFIS 1182

Query: 839  E-LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQ 897
            E   K +  L E A K+ E++    ++  V E +   +     ++++ W+    F E+++
Sbjct: 1183 ETFQKAVSFLNEEALKLIEVEGRFGVQDAVSE-ISKYLNFQFYELLFEWASQKPFVEIVK 1241

Query: 898  MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            +  + EG +++  + ++  L Q++ A++ +G+  L ++    +  ++R I+F+ SLYL
Sbjct: 1242 IAAVSEGDVVKVVQNVERLLRQVKNASRVIGDAQLAERMDQCTLLIKRDIIFTPSLYL 1299


>gi|399523711|ref|ZP_10764320.1| DEAD/DEAH box helicase [Atopobium sp. ICM58]
 gi|398375256|gb|EJN52691.1| DEAD/DEAH box helicase [Atopobium sp. ICM58]
          Length = 920

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 286/954 (29%), Positives = 464/954 (48%), Gaps = 90/954 (9%)

Query: 36  RSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           R+ V E +    YA  K+ A   T           +  SF  DPFQ  ++  +E   SVL
Sbjct: 21  RTSVGEGSASQRYAAYKEYARAATS----LRARWVEGLSFTPDPFQFDALDAVEAGNSVL 76

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDV 153
           V+A T AGKT V ++   +A +   R  YT+P+KALSNQKY EL + +   +VGL TGD 
Sbjct: 77  VAAPTGAGKTIVGQFGAFVAVQRGMRAFYTTPIKALSNQKYLELCELYGADNVGLATGDT 136

Query: 154 TLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPA 213
           +++  A  +VMTTE+ R M+Y G+  L+++  V+ DE+HY+ D+ RG VWEE II LP  
Sbjct: 137 SINSKAPVVVMTTEVCRNMIYAGAP-LEDLGVVVLDEVHYLADKMRGPVWEEVIIHLPAH 195

Query: 214 IKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL-QHYVFPVGGSGLYLVVDEK 272
           + ++ LSAT+SNA +F  WI  + +  C ++ ++ RP PL QH +       LY     K
Sbjct: 196 VAIIALSATVSNAEEFGAWIREV-RSSCEIIVSEKRPVPLYQHMIVGEEIFDLYAPTG-K 253

Query: 273 EQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
            +   +      D+ ++   G R  N     R  +    S  S +  + +        P 
Sbjct: 254 GKLNPELVAATGDSGMRGGRGSRSWN-----RSPRVRRESRPSTLISLDRA----HLLPA 304

Query: 333 IVFSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           I F FSR  CE     + ++++   T+ E   +E+     +  +  ED  +  ++     
Sbjct: 305 ITFIFSRAGCEDAVRQVLLTRITLTTRSEAAAIERYVDEVIALIAPEDAVVLGVDAWKRG 364

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L RGIA HH+G+LP++KE VE LF EGLVK ++ATET A+G+NMPA+TVV  ++ KW+G 
Sbjct: 365 LMRGIAAHHAGMLPLMKETVEHLFSEGLVKMVYATETLALGINMPARTVVIESLTKWNGS 424

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
           +H  + +GEY Q+SGRAGRRG D  G  ++     +    +  +   +  PL+S F  +Y
Sbjct: 425 AHVSLSAGEYTQLSGRAGRRGIDTEGHAVVSHRGGVAPEEVAALASKRTYPLISAFTPTY 484

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE---EEAASLDASGEAE 567
             ++NL++R+    T   V+++SF QFQ + A+  +  ++S+LE   + AA   +    +
Sbjct: 485 NMVVNLLARSTRAQT-RSVLESSFAQFQADSAVVQLATRLSELEALRDSAADDLSCSRGD 543

Query: 568 VAEYHKLKLDIAQLEK---KLMSEITRPE--RVLYYLGSGRLIKVREG-----------G 611
           V EY  ++  I+Q EK   +     TR E  RVL  + +G ++ +  G            
Sbjct: 544 VGEYLMMRERISQAEKAGARARKRETREESRRVLAGVRTGDVLALSRGRKVRLCVVGAKA 603

Query: 612 TDWGWGVVVNVVKKPSAGVGTLPS--RGGGYIVPVQLPLISTLSKIRLSVP--PDLRPLD 667
           T     V  +V+ + +      P   RGG  IV              +S+P    LR   
Sbjct: 604 TAASGRVEASVIGEDATWRALAPEDVRGGIAIVG------------HMSIPGGSALRRTK 651

Query: 668 ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-Q 726
            R  I     EL S   +G  +L    D   ED         I ++   + AHP+++   
Sbjct: 652 ERTRI---AGELRSGAAKGRYQLP--ADAAGED--------TIGQMRAAMRAHPVHRCPH 698

Query: 727 DENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
            E   R   R A +  EI+QL+  + DSQ      +      VL++LG +D D V     
Sbjct: 699 REEHARAGARWARMGREIEQLRRSI-DSQTGSVAAQFDRVCAVLERLGFLDGDRVTASGQ 757

Query: 787 RAACLIDTGDELLVTELMFN-GTFNDLDHHQVAALASCFIPVDKSSEQIN------LRME 839
           R   +   G+  LV  +  N GT+NDLD  ++A++ S  +   +S ++ N      + + 
Sbjct: 758 RLRRIF--GERDLVVAMSLNEGTWNDLDEAELASIVSALVYDSRSDDEANELTPTGVGIR 815

Query: 840 LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
           L    ++   +  ++  ++ +C  E         ++   LM     W+ G+T A  I   
Sbjct: 816 LRTAWEECVGTLARVHRVEKQCGCEPT------PSLDAGLMSSTLAWAHGSTLATAIDGA 869

Query: 900 DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           +I  G  +R  R++ + L Q+ +AA      +L +   AA + + RGI+  +++
Sbjct: 870 EIQAGDFVRWMRQVMDCLGQIASAAPT---SDLSRTAEAAKDRIGRGIVAWSTI 920


>gi|291571682|dbj|BAI93954.1| putative helicase [Arthrospira platensis NIES-39]
          Length = 904

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 284/916 (31%), Positives = 463/916 (50%), Gaps = 98/916 (10%)

Query: 60  FANPVYNG---EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF 116
            +NP+ N    +++  + FELD FQ+ ++A LE  +SV+V A T AGKT + EY+I  A 
Sbjct: 1   MSNPIQNSPQLDLSYLFPFELDDFQKEAIAALEEGKSVVVCAPTGAGKTLIGEYSIHRAL 60

Query: 117 RDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLY 174
            + +RV YT+PLKALSNQK R+  ++F D  VGL+TGD++   +A  LVMTTEI R MLY
Sbjct: 61  ANGRRVFYTTPLKALSNQKLRDFREQFGDEMVGLLTGDISFHRDAPILVMTTEIFRNMLY 120

Query: 175 RGSEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQ 228
            G+ +      L+ V  V+ DE HYM DR+RG VWEESII+ P  I+++ LSAT+ N  Q
Sbjct: 121 -GTPIGEVGTSLEGVEAVVLDECHYMNDRQRGTVWEESIIYCPRNIQLLALSATVDNQQQ 179

Query: 229 FAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL 288
             +WI  +H  P  ++ +D RP P++ Y       G++ ++D  ++    +  K      
Sbjct: 180 LTDWIRRVHG-PTELISSDSRPVPVEFYF--CNSKGMFPLLDGSKRRISPSLAK------ 230

Query: 289 KQKIGGRRENGKASGRMAKGGS---GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQH 345
                        S R  + GS    SG  ++  IV  + +R   P I F FSRR C++ 
Sbjct: 231 -------------SSRARQRGSYNRKSGVPELADIVLRLKQRDMLPAIYFIFSRRGCDRA 277

Query: 346 AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
              +S L   + +E     Q+ ++ ++   +E       + + PL K GIA HH+GLLP 
Sbjct: 278 VGDISHLSLVSPKEA----QILRDRINRFIKETPGAARPKQLEPLAK-GIASHHAGLLPA 332

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
            K  VE LFQEGL+K +FATET A G+NMPA+T V +++ K   D HR + + E++QMSG
Sbjct: 333 WKIFVEELFQEGLIKVVFATETLAAGINMPARTTVISSLSKRTDDGHRLLRASEFLQMSG 392

Query: 466 RAGRRGKDDRGICIIMVDEQME-MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
           RAGRRG D  G  ++ V+   E       +   KP PLVS F  SY  +LNL+ +     
Sbjct: 393 RAGRRGMDTIG-HVVTVETPFEGAEEAAYLATSKPNPLVSQFSPSYGMVLNLL-QTHSLE 450

Query: 525 TAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA-----------SGEAEVAEYHK 573
            A+++++ SF Q+    +L    + +  LE + A ++A           + E  +AEY K
Sbjct: 451 KAKNLVERSFGQYISTLSLVPAEQHIKNLETKLAQVEAELGLGEDLDINTLEDTLAEYEK 510

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--PSAGVG 631
            +  + Q EK+L+  + +  R        R  K+ E      +G +V++  K  P+A   
Sbjct: 511 QQQRLKQ-EKRLLKTLQKQAR------EARTQKMAEALDLAAFGTLVSLRGKHVPTARKS 563

Query: 632 TLPSRGGGYIV----PVQLPLISTL---SKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
             P      +     P Q P    L   ++  +    D+  L A    L  V  LE   P
Sbjct: 564 DSPPISAVLVAQTPSPGQAPYFLCLGRDNRWYIVAAMDVVNLHAELPRLTWVDHLE--MP 621

Query: 685 QGLPKLN--------------PVKDMKIED--PEVVDLVNQIEELEHKLFAHPLNK-SQD 727
           +   KL                + ++ + D  PEVV+ + +IE++E  L  HP  K  + 
Sbjct: 622 EMQFKLGQSRRGDEITEALAVQIPELLVADTAPEVVNQITRIEQVEEILATHPAQKFGKP 681

Query: 728 ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGR 787
           +  ++   R++ +  EI   + ++R    + +R E  N   +L++   +D     +L G+
Sbjct: 682 QKILKRLSRRSAIQKEIVDYQEELRQYLERNWR-EFLNLIDILQEFEALDDLQPTKL-GQ 739

Query: 788 AACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP-VDKSSEQINLRME--LAKPL 844
           A   +   +EL +  ++ +G F++L+ + +A   S  +  V +S    + ++   + + L
Sbjct: 740 ATAALRGDNELWLGLVLMSGEFDNLEPYNLAGACSALVTEVSRSDSWTHYQLSEVVQETL 799

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
            +L    R + ++Q   ++E  V    E      L  ++  W+ G  +AE+++ T + EG
Sbjct: 800 NRLWSLRRSLIKVQGRHRVEFLV--LPERREHQRLSAILEQWAGGVEWAELVKNTTLDEG 857

Query: 905 SIIRSARRLDEFLNQL 920
            I+R  RR  +FL+Q+
Sbjct: 858 DIVRIIRRTRDFLSQI 873


>gi|70952427|ref|XP_745382.1| helicase  [Plasmodium chabaudi chabaudi]
 gi|56525688|emb|CAH74731.1| helicase with Zn-finger motif, putative [Plasmodium chabaudi
           chabaudi]
          Length = 889

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 203/523 (38%), Positives = 302/523 (57%), Gaps = 68/523 (13%)

Query: 72  TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKAL 131
           +Y FELD FQ+ +V  +   + V ++AHTSAGKT +AE+AIA++ +  ++ IYTSP+KAL
Sbjct: 291 SYDFELDNFQKRAVKHINNFKHVFIAAHTSAGKTLIAEHAIALSIKLNKKAIYTSPIKAL 350

Query: 132 SNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           SNQKY E    FK+VG++TGDV ++ NA+C +MTTEILR +LY    ++  +  VIFDE+
Sbjct: 351 SNQKYYEFKNIFKNVGIITGDVKMNVNANC-IMTTEILRNLLYLNDNIINNIHCVIFDEV 409

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ D  RGV+WEESII LPP +++V LSAT+ N  QFA+W+    ++    + T  RP 
Sbjct: 410 HYVNDEFRGVIWEESIIMLPPHVQIVLLSATVPNYLQFADWVGFTKQKEVIAISTKKRPI 469

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDTFLKQKIG--GRRENGKASGRM 305
           PL HY++      L+L++DEK +F    F    +K+++   K++ G  G+  +G + G  
Sbjct: 470 PLLHYIY--AHDSLFLIMDEKNKFYSSAFKEIYIKIRE---KEEAGKKGKELSGSSHGGK 524

Query: 306 AK-----------------------GGSGSGGSDIFK----------------------- 319
            K                         +G   +D  K                       
Sbjct: 525 KKIYYSDAKNNKDNQMEKQNKTGTTNNTGDKQNDTVKGYYQYCKQKQKQRMFQNEANMKT 584

Query: 320 -------IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVD 372
                  ++K + E    PV++F FSR +CE +A SM  L+F   ++K  V    + +  
Sbjct: 585 EIQKLQALIKKLDEDNKLPVVLFCFSRIKCETYAKSMPHLNFLDNKKKSKVHLFIKESAS 644

Query: 373 CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGL 432
            L ++DR+L  I+++  LL+ GI VHHSGLLP++KE+VE+LF +GL+K LFATETFAMG+
Sbjct: 645 KLCDQDRDLNQIKILSKLLENGIGVHHSGLLPILKEIVEILFSKGLIKVLFATETFAMGI 704

Query: 433 NMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTL 491
           NMPAK+V+FT++ K D    R + S EY QMSGRAGRR  D  G   I   + + +   L
Sbjct: 705 NMPAKSVIFTSIYKHDHLKKRILTSSEYTQMSGRAGRRSSDTHGYVYIYCSDNIPDQVQL 764

Query: 492 KDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            +M++ K   L S F+++Y  IL L+     Q   E ++ +SF
Sbjct: 765 TEMMMQKAVSLKSKFKVTYNMILKLL--INKQINIEKMLFSSF 805


>gi|300120206|emb|CBK19760.2| unnamed protein product [Blastocystis hominis]
          Length = 945

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 212/527 (40%), Positives = 301/527 (57%), Gaps = 30/527 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           +A+ + FELD FQ+ S+  LER ESV V AHTSAGKT VA+YAI++      + IYTSP+
Sbjct: 46  LAQEFPFELDDFQKRSIVHLERGESVYVCAHTSAGKTVVADYAISLCLSHMTKCIYTSPV 105

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKY +   +++DVG++TGDV+L+P AS LVMTTEILR MLY GS++++++ WV+F
Sbjct: 106 KALSNQKYHDFKLKYEDVGIITGDVSLNPTASVLVMTTEILREMLYNGSDIIRDIEWVVF 165

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE HY+ + +RGVVWEESII LP  + ++FLSAT  N  Q A+WI     +   ++ TDF
Sbjct: 166 DEAHYINNSDRGVVWEESIILLPDHVGLIFLSATTPNVKQIADWIGRSKHKKIWIMQTDF 225

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL+  +   G   +  V   +   R D   + Q       I  R      S R  +G
Sbjct: 226 RPVPLEFDLIYQG--KVTCVASLQPIHRIDQRREKQVLSRSNPIASRL----PSPRNIEG 279

Query: 309 GSGSGGSDIFKIVKMIMERKFQ-----------PVIVFSFSRRECEQHAMSMSKLDFNT- 356
                  + F+ + +   R  Q           P   F+  R  C Q+A  ++K   N  
Sbjct: 280 RRAFPSCEDFQPLSIRSPRCNQDSQEEQRHARTPASHFAMYRASCSQNAQKLAKEKVNLL 339

Query: 357 -QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
             +E   V   +Q  +  L  EDR+L  ++ +LPLL +GI VHH+GLLP++KE+VE+LF 
Sbjct: 340 PPDEAQYVRSFYQRCIQDLRAEDRSLAQVQTLLPLLCQGIGVHHAGLLPLLKEVVEMLFS 399

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
            G +K LFATETFA+G+NMPAK+V F+ + K DG + RY  S E+ QMSGRAGRRGKD  
Sbjct: 400 TGYIKVLFATETFAIGVNMPAKSVCFSGLAKNDGITSRYFLSSEFTQMSGRAGRRGKDLL 459

Query: 476 GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           G   I V      N +  +V G    + S FR+SY  I+++M   +   + E +I +SF 
Sbjct: 460 GRVYIHVSNLPSTNVVMGIVSGTRDLITSQFRISYSMIMSIMRVQD--LSLEGMISHSFS 517

Query: 536 Q---------FQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           +           Y+K L  I     +L+++        + E A  +K
Sbjct: 518 EAVHRSKTEFTAYKKNLKSIENVAERLKKKPILFSLQDQIEYANQYK 564



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 107/211 (50%), Gaps = 2/211 (0%)

Query: 745 QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
           ++L +KM + ++     EL +R  VLK L +ID D  V +KGR  C I +G+ELL+ EL+
Sbjct: 722 EKLTNKMGEEKL-SLLPELHSRIAVLKNLQYIDEDDTVTMKGRCCCFIRSGNELLLLELL 780

Query: 805 FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           F    +DL   ++A + S  I  +++ +         K   ++ E   +I +++ +C L 
Sbjct: 781 FENLLHDLTPPELAGVLSVCI-YERNDDVTLTNAHFIKIQHEMIEIVERIGQLEKDCGLS 839

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
                  E  +    M++   W KG TF+++++   + EG ++    R +    +L   A
Sbjct: 840 EESIMTKEKNIHVGFMEIAEKWCKGMTFSDLMKGCPLDEGFVVNQLLRTEMVCRRLADIA 899

Query: 925 QAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           Q +G   L +     S+++ R I+++ SLYL
Sbjct: 900 QEIGNPELFQTCQMISQAMLRDIVYTPSLYL 930


>gi|409993430|ref|ZP_11276571.1| DSH-like protein [Arthrospira platensis str. Paraca]
 gi|409935699|gb|EKN77222.1| DSH-like protein [Arthrospira platensis str. Paraca]
          Length = 912

 Score =  370 bits (949), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 284/915 (31%), Positives = 463/915 (50%), Gaps = 98/915 (10%)

Query: 61  ANPVYNG---EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFR 117
           +NP+ N    +++  + FELD FQ+ ++A LE  +SV+V A T AGKT + EY+I  A  
Sbjct: 10  SNPIQNSPQLDLSYLFPFELDDFQKEAIAALEEGKSVVVCAPTGAGKTLIGEYSIHRALA 69

Query: 118 DKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYR 175
           + +RV YT+PLKALSNQK R+  ++F D  VGL+TGD++   +A  LVMTTEI R MLY 
Sbjct: 70  NGRRVFYTTPLKALSNQKLRDFREQFGDEMVGLLTGDISFHRDAPILVMTTEIFRNMLY- 128

Query: 176 GSEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQF 229
           G+ +      L+ V  V+ DE HYM DR+RG VWEESII+ P  I+++ LSAT+ N  Q 
Sbjct: 129 GTPIGEVGTSLEGVEAVVLDECHYMNDRQRGTVWEESIIYCPRNIQLLALSATVDNQQQL 188

Query: 230 AEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK 289
            +WI  +H  P  ++ +D RP P++ Y       G++ ++D  ++    +  K       
Sbjct: 189 TDWIRRVHG-PTELISSDSRPVPVEFYF--CNSKGMFPLLDGSKRRISPSLAK------- 238

Query: 290 QKIGGRRENGKASGRMAKGGS---GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHA 346
                       S R  + GS    SG  ++  IV  + +R   P I F FSRR C++  
Sbjct: 239 ------------SSRARQRGSYNRKSGVPELADIVLRLKQRDMLPAIYFIFSRRGCDRAV 286

Query: 347 MSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVI 406
             +S L   + +E     Q+ ++ ++   +E       + + PL K GIA HH+GLLP  
Sbjct: 287 GDISHLSLVSPKEA----QILRDRINRFIKETPGAARPKQLEPLAK-GIASHHAGLLPAW 341

Query: 407 KELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGR 466
           K  VE LFQEGL+K +FATET A G+NMPA+T V +++ K   D HR + + E++QMSGR
Sbjct: 342 KIFVEELFQEGLIKVVFATETLAAGINMPARTTVISSLSKRTDDGHRLLRASEFLQMSGR 401

Query: 467 AGRRGKDDRGICIIMVDEQME-MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           AGRRG D  G  ++ V+   E       +   KP PLVS F  SY  +LNL+ +      
Sbjct: 402 AGRRGMDTIG-HVVTVETPFEGAEEAAYLATSKPNPLVSQFSPSYGMVLNLL-QTHSLEK 459

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA-----------SGEAEVAEYHKL 574
           A+++++ SF Q+    +L    + +  LE + A ++A           + E  +AEY K 
Sbjct: 460 AKNLVERSFGQYISTLSLVPAEQHIKNLETKLAQVEAELGLGEDLDINTLEDTLAEYEKQ 519

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK--PSAGVGT 632
           +  + Q EK+L+  + +  R        R  K+ E      +G +V++  K  P+A    
Sbjct: 520 QQRLKQ-EKRLLKTLQKQAR------EARTQKMAEALDLAAFGTLVSLRGKHVPTARKSD 572

Query: 633 LPSRGGGYIV----PVQLPLISTL---SKIRLSVPPDLRPLDARQSILLAVQELESRFPQ 685
            P      +     P Q P    L   ++  +    D+  L A    L  V  LE   P+
Sbjct: 573 SPPISAVLVAQTPSPGQAPYFLCLGRDNRWYIVAAMDVVNLHAELPRLTWVDHLE--MPE 630

Query: 686 GLPKLN--------------PVKDMKIED--PEVVDLVNQIEELEHKLFAHPLNK-SQDE 728
              KL                + ++ + D  PEVV+ + +IE++E  L  HP  K  + +
Sbjct: 631 MQFKLGQSRRGDEITEALAVQIPELLVADTAPEVVNQITRIEQVEEILATHPAQKFGKPQ 690

Query: 729 NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRA 788
             ++   R++ +  EI   + ++R    + +R E  N   +L++   +D     +L G+A
Sbjct: 691 KILKRLSRRSAIQKEIVDYQEELRQYLERNWR-EFLNLIDILQEFEALDDLQPTKL-GQA 748

Query: 789 ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP-VDKSSEQINLRME--LAKPLQ 845
              +   +EL +  ++ +G F++L+ + +A   S  +  V +S    + ++   + + L 
Sbjct: 749 TAALRGDNELWLGLVLMSGEFDNLEPYNLAGACSALVTEVSRSDSWTHYQLSEVVQETLN 808

Query: 846 QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
           +L    R + ++Q   ++E  V    E      L  ++  W+ G  +AE+++ T + EG 
Sbjct: 809 RLWSLRRSLIKVQGRHRVEFLV--LPERREHQRLSAILEQWAGGVEWAELVKNTTLDEGD 866

Query: 906 IIRSARRLDEFLNQL 920
           I+R  RR  +FL+Q+
Sbjct: 867 IVRIIRRTRDFLSQI 881


>gi|434387310|ref|YP_007097921.1| superfamily II RNA helicase [Chamaesiphon minutus PCC 6605]
 gi|428018300|gb|AFY94394.1| superfamily II RNA helicase [Chamaesiphon minutus PCC 6605]
          Length = 888

 Score =  369 bits (948), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 295/920 (32%), Positives = 452/920 (49%), Gaps = 139/920 (15%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + F LD FQ  +V  L   +SV+V A T +GKT + EYAI  A R  +RV YT+P
Sbjct: 10  QLKDIFPFPLDRFQLQAVDALNAGKSVVVCAPTGSGKTLIGEYAIHRALRQGRRVFYTTP 69

Query: 128 LKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLY--RGSEV---L 180
           LKALSNQKYR+   EF   +VGL+TGD+++  +A  +VMTTEI R MLY  R  EV   +
Sbjct: 70  LKALSNQKYRDFRAEFGEGNVGLLTGDISIDRDAPIVVMTTEIFRNMLYGTRIGEVGTSM 129

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
             V  V+ DE HYM D++RG VWEESII+ PP I++V LSAT++N+ Q  EWI  +H   
Sbjct: 130 VGVEAVVLDECHYMNDKQRGTVWEESIIYCPPHIQLVALSATVANSKQLTEWIGAVHGS- 188

Query: 241 CHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
             ++Y+DFRP PL+ H+V P    G+  ++D        N  KL       +  G R+  
Sbjct: 189 TELIYSDFRPVPLEFHFVNP---KGILPLLDP-------NTAKLNPKLKTHRPTGSRK-- 236

Query: 300 KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
                            I  +V  + ER+  P I F FSRR C++    M+ +   T  E
Sbjct: 237 -----------AEDVPSIGFVVSKLAEREMLPAIYFIFSRRGCDKAVAEMATMQLVTPAE 285

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
              ++    + +D  N E      +E   PL K G+A HH+G+LP  K LVE LF  GL+
Sbjct: 286 SALLKIRIDDFLDK-NPEAARAGQVE---PLYK-GVAAHHAGILPAWKSLVEELFGMGLI 340

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K +FATET A G+NMPA+T V +++ K     HR + + E++QM+GRAGRRGKD  G  +
Sbjct: 341 KVVFATETLAAGINMPARTTVISSLSKRTDQGHRLLTASEFLQMAGRAGRRGKDVVGYVV 400

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS------------RAEGQFTAE 527
                        D     P PLVS F  +Y  +LNL+             R+ G FT  
Sbjct: 401 ATQTRFEGAKEASDFATSAPDPLVSQFTPTYGMVLNLLQTHTLEEARELVERSFGHFT-- 458

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYH-KLKLDIAQLEK-KL 585
                + H    ++++ DI K++S L+E    +D +  A+    H +LKLD  QL+  +L
Sbjct: 459 ----KTLHLLPQQQSIGDIKKELSTLQESLNKIDPNVLADYETAHSQLKLDQNQLKNLQL 514

Query: 586 MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ 645
            +E  +         +G++ K                 + P+A  GT+ S  G + VPV 
Sbjct: 515 YTEQVQ---------AGQVSK-----------------QLPAAFPGTILSLKGKH-VPVA 547

Query: 646 LPLISTL-SKIRLS-VPPDLRPL--DARQSI-----LLAVQELES------RFPQGLPKL 690
            PL + L +KI  S   P L  L  D R  +     ++AV +  S      R PQ +  L
Sbjct: 548 TPLPAVLVTKIAGSGYKPALVCLGQDNRWYVVNHQDVVAVHKHWSEYGGKQRVPQVVSLL 607

Query: 691 NPVKDM----------------------KIEDPEVVDLVNQIE---ELEHKLFAHPLNK- 724
            P  DM                       +E P   +L  Q++   EL+ KL  HP+ + 
Sbjct: 608 PPA-DMPLKPGQVRKGMTLTAEIAQSIPNLEPPATAELTAQVKTVAELKTKLENHPVWEW 666

Query: 725 SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
                 ++ ++R+A +  EI+ L+  ++ +Q+ +   E  N   VL+++  +   GV+  
Sbjct: 667 GNPATLLKRYRRQATLEQEIKDLQDTLQ-TQLDRHWQEFLNLIEVLRQVNGL--QGVLPT 723

Query: 785 K-GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMEL 840
           + G AA  I   +EL +   + +G  + LD H +AA+    +   P   S    +   E+
Sbjct: 724 RIGEAAAAIRGDNELWIALALMSGYLDTLDPHHLAAVICALVSETPRSDSWTNYDPADEV 783

Query: 841 AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
              L  L+ S R++ +IQ   ++ + V    E      L+ ++  W+   ++ E+   T+
Sbjct: 784 VMTLSALRGSRRQLFQIQRRYQVALPVWMEYE------LVGIVENWALEVSWTELCSNTN 837

Query: 901 IFEGSIIRSARRLDEFLNQL 920
           + EG I+R  RR  + L+Q+
Sbjct: 838 LDEGDIVRMLRRTVDLLSQI 857


>gi|399527088|ref|ZP_10766815.1| DEAD/DEAH box helicase [Actinomyces sp. ICM39]
 gi|398362339|gb|EJN46041.1| DEAD/DEAH box helicase [Actinomyces sp. ICM39]
          Length = 907

 Score =  369 bits (946), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 287/916 (31%), Positives = 451/916 (49%), Gaps = 79/916 (8%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
            T SF  DPFQ  ++  +E   SVLV+A T AGKT V ++   +A     R  YT+P+KA
Sbjct: 38  STLSFTPDPFQIQALDAVEAGSSVLVAAPTGAGKTIVGQFGAYVALEQGMRAFYTTPIKA 97

Query: 131 LSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQKY EL   +   +VGL TGD +++  A  +VMTTE+LR M+Y G+  L ++  VI 
Sbjct: 98  LSNQKYLELCDLYGADNVGLATGDTSVNSGAPVVVMTTEVLRNMIYAGA-ALDDLGVVIL 156

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D+ RG VWEE II LP  + ++ LSAT+SNA +F  WI  + +  C ++ ++ 
Sbjct: 157 DEVHYLADKMRGPVWEEVIIHLPTHVAIIALSATVSNAEEFGAWIREV-RSTCEIIVSEK 215

Query: 249 RPTPL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           RP PL QH +       LY     K +   +     +D+ ++   G R  N +   R   
Sbjct: 216 RPVPLYQHMIVGEDIFDLYAPTG-KGKLNPELVAATRDSGMRGGRGSRSWNHEVRVRRE- 273

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQ 365
               S  S +  + +     +  P I F FSR  CE     +  +++   T+ E   +E 
Sbjct: 274 ----SRPSTLISLDRA----RLLPAITFIFSRAGCEDAVRQILSTRITLTTRSEAAEIES 325

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
                +  L  ED  +   E     L RGIA HH+G+LP++KE VE LF  GLVK ++AT
Sbjct: 326 YVDEVIALLPPEDAIVLGTEAWKRGLMRGIAAHHAGMLPLMKESVEHLFSRGLVKMVYAT 385

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A+G+NMPA+TVV  ++ KW+G +H  + +GEY Q+SGRAGRRG D  G  ++     
Sbjct: 386 ETLALGINMPARTVVIESLTKWNGSAHVSLSAGEYTQLSGRAGRRGIDTEGHAVVSHRGG 445

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           +    +  +   +  PL+S F  +Y  ++NL++R+    T   V+++SF Q+Q + A+  
Sbjct: 446 VAPEEVAALASKRTYPLISAFTPTYNMVVNLLARSTRAQT-RKVLESSFAQYQADSAVVA 504

Query: 546 IGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEK---------------K 584
           +  ++++LE   A  DA+ E       +V EY  L+  + Q EK               +
Sbjct: 505 LASRLTELE---AQRDATAEDLSCSHGDVREYLTLRDQLGQAEKSGARARKREARDESRR 561

Query: 585 LMSEITRPERVLYYLGSG---RLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI 641
           L+S + RP  VL  L  G   RL  V    T     V V+V+ + +      P    G I
Sbjct: 562 LLSGV-RPGDVL-ALTRGRKTRLCVVGAKATSASGRVEVSVIGEDATWRALAPEDVRGAI 619

Query: 642 VPVQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE 699
             V            +S+P    LR    R  I     EL S   +GL ++ P    +  
Sbjct: 620 AVVG----------HMSIPGGSALRRTKERTRI---AGELRSGAARGLYEV-PADSTQAS 665

Query: 700 DPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
           DP        +  L   +  HP+++    E   R   + A +  EI +L+S + DSQ   
Sbjct: 666 DP--------VSALRLAMRQHPVHRCPHREEHARAGAQWARLAREIDRLRSSI-DSQTGS 716

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              +      VL++LG +  D V     R   +    D L+V   M  GT+N+LD  ++A
Sbjct: 717 VAAQFDRVCAVLERLGFLAGDEVTDAGQRLRRIFGERD-LVVAMSMNEGTWNELDEAELA 775

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARK-IAEIQNECKLEVNVDEYVESTVRP 877
           ++ S  +  D  S+    ++  A    +LQE+  + +A ++   ++E      +  ++  
Sbjct: 776 SMVSALV-YDSRSDDDAQQLAPAGVGIRLQEAWHESLATLERVHRVEKACGCDLTPSLDA 834

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            LM     W+ G+T A  I  T I  G  +R  R++ + L Q+ A+A + GE  L +K  
Sbjct: 835 GLMAATLAWAHGSTLATAIDATPIQAGDFVRWMRQVMDCLGQI-ASASSSGE--LARKAE 891

Query: 938 AASESLRRGIMFSNSL 953
           AA + + RGI+  +++
Sbjct: 892 AAKDRIGRGIVAWSTI 907


>gi|358339260|dbj|GAA47356.1| helicase SKI2W, partial [Clonorchis sinensis]
          Length = 1142

 Score =  368 bits (945), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 200/474 (42%), Positives = 286/474 (60%), Gaps = 53/474 (11%)

Query: 84  SVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
           ++ CLERN+SV V+AHTSAGKT VAEYA AM  R   RVIYTSP+KALSNQK+ +  + F
Sbjct: 3   AILCLERNQSVFVAAHTSAGKTVVAEYACAMCRRRGSRVIYTSPIKALSNQKFHDFRRTF 62

Query: 144 -KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVV 202
            +DVGL+TGD+ ++  ++ LVMTTEIL  ML   ++ ++++  VI DE+HY+ D ERG V
Sbjct: 63  GEDVGLLTGDIKVATESTFLVMTTEILYNMLCNAADAIRDLEVVIMDEVHYLNDAERGHV 122

Query: 203 WEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGG 262
           WE+ +I LP  + +V LSAT+ N  +FA+W+  +     HVV T+ RP PL+HY+F  G 
Sbjct: 123 WEQIMIMLPKHVLLVMLSATVPNTMEFADWLGRIRGSEIHVVATNRRPVPLEHYLF-TGL 181

Query: 263 SG------LYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSD 316
            G      L+LVVD+  QF                              A GG G     
Sbjct: 182 DGQTPEKQLHLVVDKHSQFNLP---------------------------APGGLGVHEKR 214

Query: 317 I----FKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAV- 371
           I      +V+++ ER+  P I F FSR   E  A ++S +D  +++EK+ V+Q  + ++ 
Sbjct: 215 IKNMWLGVVRLLQERELMPAIAFGFSRNSLETLAENLSSVDLLSKDEKNEVQQFLRYSIK 274

Query: 372 DCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMG 431
           + L   D+ LP++  +  L  RG+AVHH+G+LP++KE VE+LFQ GL++ LFATETFAMG
Sbjct: 275 NRLKGPDKRLPSVLFITDLACRGLAVHHAGMLPLLKETVEMLFQRGLIRLLFATETFAMG 334

Query: 432 LNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM--- 488
           +NMPA+ V+F+ ++K+DG   R +  GEY QM+GRAGRRG D  G  IIMV+        
Sbjct: 335 VNMPARCVLFSTLEKYDGRRRRPLNPGEYTQMAGRAGRRGLDASGTVIIMVEGVGASVAS 394

Query: 489 --------NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
                    TL  M+LG P  LVS F+++Y  IL+L        + + +++ SF
Sbjct: 395 PKLGVPAEATLTSMILGTPTQLVSQFKITYSMILHL--HRTNWLSPQDIMRRSF 446



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 53/273 (19%)

Query: 734  FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD---GVVQLKGRAAC 790
            F R       +++L++ + D ++     E   R RVL++LG ID+    G + LKG  AC
Sbjct: 857  FHRTCRRRWAVRRLEASLSDDKLH-LNTEYIGRLRVLEELGFIDSATERGCLSLKGLVAC 915

Query: 791  LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS-----EQINLRMELAKPLQ 845
             +    E+L+T+L+ +G+F  L    +AAL SCF+   ++S     E    +   +KP  
Sbjct: 916  ELQQM-EVLLTQLLLDGSFTQLPPADIAALLSCFVFEIRASDTAREEHTAQQSASSKPQS 974

Query: 846  QLQ----------------------ES---ARKIAEIQNECKLEVN-------------- 866
             L                       ES   ARKIA +    K  V               
Sbjct: 975  HLVVLDTASSDTAPTPSAGPEPAVFESAVVARKIASVPEHLKEAVAKMFSFASNLEQLQR 1034

Query: 867  ----VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
                 D   ++ +   L+ V + W+ G  F+ ++ +T++ EG+++R   RLDE L  +  
Sbjct: 1035 KHGLSDPTTDTRLNCTLVQVTHAWATGHPFSTLVTLTEMQEGNLVRGLLRLDELLRHICN 1094

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            A   +G+  L  +   A  ++ R ++ + SLY+
Sbjct: 1095 ACHRLGDQALCLRMNEARNAIHRDLVCAPSLYI 1127


>gi|420154156|ref|ZP_14661079.1| DEAD/DEAH box helicase [Actinomyces massiliensis F0489]
 gi|394755492|gb|EJF38710.1| DEAD/DEAH box helicase [Actinomyces massiliensis F0489]
          Length = 982

 Score =  365 bits (938), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 271/940 (28%), Positives = 452/940 (48%), Gaps = 111/940 (11%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A +Y F LD FQ      LER E VLV+A T AGKT V E+AI +A     +  YT+P+
Sbjct: 25  FADSYDFPLDDFQVRGCEALERGEGVLVAAPTGAGKTVVGEFAIHLALAKGLKAFYTTPI 84

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L   +  + VGL+TGD +++P+A  +VMTTE+LR MLY GS  L  + +V
Sbjct: 85  KALSNQKYLDLLARYGTQHVGLLTGDTSVNPHADVIVMTTEVLRNMLYSGSRDLDRLGFV 144

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE II L P +++V LSAT+SNA +F +W+  +  +   VV +
Sbjct: 145 VMDEVHYLADRFRGPVWEEVIIHLAPEVQVVSLSATVSNAEEFGDWLGQVRGRTA-VVVS 203

Query: 247 DFRPTPL-QHYVF----------------PVGGSGLY-----------LVVDEKEQFRED 278
           + RP PL QH +                 P   SG+            L ++        
Sbjct: 204 EHRPVPLTQHMMVGRRLLRLHTVPSSSPSPTAVSGVSDSGETSETAAELPLNPDLLKALA 263

Query: 279 NFVKLQDTFLKQKIGGRRENGKASGRMAKGGS------------GSGGSDIFK------- 319
              +           GR   G  + +  +G S            G GG+ + +       
Sbjct: 264 RARRAAAGEAGASKSGRGPVGSRARQWRRGRSHSDYPAYPARRRGDGGARMARLRPPSRV 323

Query: 320 -IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNE 376
            ++  + +    P IVF FSR  C+Q       + +D  T+ E   + +V +     +  
Sbjct: 324 TVITALEQADLLPAIVFVFSRAGCQQAVDQAVDAGIDLTTESEAARIREVIERHTAEIPT 383

Query: 377 EDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPA 436
            D  +         L+RG+A HH+GLLPV KE VE LF  GLVK ++ATET A+G+NMPA
Sbjct: 384 RDLGVLGFRNWAHALERGVAAHHAGLLPVFKETVEELFSAGLVKVVYATETLALGINMPA 443

Query: 437 KTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVL 496
           +TVV  +++KW+G +H  +  GEY Q++GRAGRRG D  G  +++  + +E   +  +  
Sbjct: 444 RTVVLESLRKWNGSAHVTLSPGEYTQLTGRAGRRGIDIEGHAVVLAADDIEPAFVSSLAS 503

Query: 497 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
            +  PLVS FR +Y   +NL+ R   +  A  V+++SF Q+Q ++++ ++  +V +   +
Sbjct: 504 RRTYPLVSAFRPTYNMAVNLLGRTS-RARAREVLESSFAQYQADRSVVELAAQVRRKRRK 562

Query: 557 AASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPE------RVLYYLGSGRLIKV 607
            +SL+      +    EY +L+  IA  E    S   R E      R +  L  G ++  
Sbjct: 563 LSSLEERMTCRLGDFREYARLRQSIADAEAD-QSRRGRAEQRDETVRAMNSLNRGDIVIH 621

Query: 608 REG-----------GTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIR 656
           R+G           GTD     ++ V+ + +  +   P      +V V    I++ + +R
Sbjct: 622 RKGRRHKHAVVLDHGTDRTGAPILTVLGEDTRVLTLSPDTSPEGVVRVGSLKIASSADVR 681

Query: 657 LSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHK 716
                  RP D R+ +    + L      G      +K  + +  +       ++EL H+
Sbjct: 682 -------RPRD-REHL---AERLLDALRSGDVDQARIKRRRRQGADSEQTAMHLKELRHQ 730

Query: 717 LFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKL 773
           + AHP +   + E   R  ++    + ++ +L++++  R   I +  D +     VL  L
Sbjct: 731 MRAHPCHACPEREEHARMGRKWMRTSIDVDRLQARVESRTGTIARLFDAV---CEVLTDL 787

Query: 774 --------GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV-AALASCF 824
                   GH + +  V   GR    I    +LL++E + +G +  LD   + AA+++C 
Sbjct: 788 GYLEPVDRGHPERELRVTDAGRVLARIYAERDLLISECLRHGLWQGLDPADLAAAVSACV 847

Query: 825 IPVDKSSEQINLRM----ELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLM 880
                +++ + L +     L   L++    +R I +++   ++E +      S   P L 
Sbjct: 848 YEPRLATQSLGLPIAPGSRLGAVLREEIRLSRSINDLETLARIEFS------SGAEPALA 901

Query: 881 DVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
             +  W++GA  AEV++  ++  G  +R +++L + L QL
Sbjct: 902 GAVRAWAEGADLAEVLEACELTAGDFVRCSKQLLDVLRQL 941


>gi|302850669|ref|XP_002956861.1| hypothetical protein VOLCADRAFT_107417 [Volvox carteri f.
           nagariensis]
 gi|300257921|gb|EFJ42164.1| hypothetical protein VOLCADRAFT_107417 [Volvox carteri f.
           nagariensis]
          Length = 1584

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 232/584 (39%), Positives = 331/584 (56%), Gaps = 52/584 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           +A  Y FELD FQ+ +V  LE   SV V+AHTSAGKT VAEYA A+A +   R +YTSP+
Sbjct: 440 LALHYPFELDTFQKEAVLHLEAGRSVFVAAHTSAGKTVVAEYAFALATQHCTRAVYTSPI 499

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           K +SNQK+R+   +F +VGL+TGDV + P A CL+MTTEILR MLY+G++++++V  V+F
Sbjct: 500 KTISNQKFRDFSSKF-EVGLLTGDVQVRPTAPCLIMTTEILRSMLYKGADLIRDVEVVVF 558

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV---- 244
           DE+HY+ D +RGVVWEE II LPP I +V LSAT+ N   FA+W+    ++  HV     
Sbjct: 559 DEVHYVNDVDRGVVWEEVIIMLPPHITLVLLSATVPNVMDFADWVGRTKRKVIHVTGARA 618

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEK----EQFREDNFVKLQDTFLKQKIGGRRENGK 300
            T  RP PL+H ++   G  +Y +   +    E  R                G R E   
Sbjct: 619 RTTKRPVPLEHSLY--YGGEIYPICSREVFNPEGLRATRGGGPNRGGPGGGGGFRSER-- 674

Query: 301 ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
                           + ++V ++ +R   PV VF FS++ C+  A ++S LD  T  EK
Sbjct: 675 --------------QQLLELVGVLGKRAMLPVAVFCFSKKRCDICADALSSLDLATGSEK 720

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V       +  L E DR LP I  +  +++RGIAVHH+GLLP++KE+VE+LF +G +K
Sbjct: 721 AAVHSFVDRCLARLKEGDRQLPQILRLRDMMRRGIAVHHAGLLPIMKEVVEMLFCQGYIK 780

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            LF TETFAMG+N P +TVVF +++K DG + RY+  GEY QM+GRAGRRG D  G  ++
Sbjct: 781 VLFCTETFAMGVNAPTRTVVFHSLRKHDGKNFRYLLPGEYTQMAGRAGRRGLDAVGHVLL 840

Query: 481 MVDEQMEM---NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
              ++ E+   + L+ M+LG+   L S FRL+Y  ILNL+ R E     E ++K SF +F
Sbjct: 841 ACWDERELYGESELRTMLLGRGVKLESQFRLTYGMILNLL-RVE-DLKVEDMLKRSFAEF 898

Query: 538 QYEKALPDIGKKVSKLEEE----------AASLDASGEAEVAEYHKLKLDIAQLEKKLMS 587
             ++A P    ++S +E            A SL  S E EV EY  L   +  L  +L  
Sbjct: 899 HAQRAAPAGAAELSDVERRLAAAAAAPWPATSLGCSRE-EVEEYADLCEQLEVLYAQLQD 957

Query: 588 EITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG 631
            +   +     L  GRL+          +G  VN + +P+  +G
Sbjct: 958 ALVANKSFQQALVPGRLVL---------YGNPVNGLTEPAVVLG 992



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 145/271 (53%), Gaps = 7/271 (2%)

Query: 687  LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQ---RKAEVNHE 743
            LP L+P  D KI D   V  +     L+ +  A  L   +D   +  FQ      +++  
Sbjct: 1206 LPLLDPRVDFKIADVAAVQAMLARAALQSRRAA--LRPHRDPGLVEAFQLVRTHRQLSRR 1263

Query: 744  IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI-DTGDELLVTE 802
              +L+ ++ D+ +Q+   E + R  VL++LG+++AD  V LKGR  C I  T DEL+ TE
Sbjct: 1264 AAELRHQLSDASLQQL-PEFEQRVAVLQRLGYLEADRSVTLKGRVCCEIQSTQDELVATE 1322

Query: 803  LMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECK 862
             +F+G   +L   +  AL S  +  +KS  +  L   LA     L      +A IQ E  
Sbjct: 1323 AVFSGLLGELSPEEAVALLSALVFQEKSEVEPRLPPSLASARDSLTALTASLAGIQREGG 1382

Query: 863  LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
            L+V  +++V   +   LM+V+Y W++G  F+ + ++TD+ EGS++R+  RLD    +L+ 
Sbjct: 1383 LDVVPEQHVAEVLHCGLMEVVYEWARGTPFSAITELTDVMEGSVVRAMVRLDGACRELQD 1442

Query: 923  AAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            AA+ +G   L +   AAS +++R ++F+ SL
Sbjct: 1443 AARVMGNTALFQLMQAASAAIKRDVIFAASL 1473


>gi|401404381|ref|XP_003881710.1| putative DEAD/DEAH box helicase domain-containing protein [Neospora
           caninum Liverpool]
 gi|325116123|emb|CBZ51677.1| putative DEAD/DEAH box helicase domain-containing protein [Neospora
           caninum Liverpool]
          Length = 1366

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 196/460 (42%), Positives = 291/460 (63%), Gaps = 38/460 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           +A  + F LD FQ+ ++  LE+ ++V V+AHTSAGKT VAEYAIA+A R  +R IYTSPL
Sbjct: 466 LALEFPFPLDDFQKRAILHLEKYQTVFVAAHTSAGKTVVAEYAIALAVRRNRRCIYTSPL 525

Query: 129 KALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           KALSNQKYRE   +F  VG++TGDV ++P+A+CL++TTEILR +LY G  ++ +V  VIF
Sbjct: 526 KALSNQKYREFRLKFPSVGIVTGDVCINPDANCLIVTTEILRSLLYLGDALIGQVDSVIF 585

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE HY+ D ERGVVWEE+II LP  + M+ LSAT+ N  QFA+WI  + ++    + TD 
Sbjct: 586 DEAHYINDIERGVVWEEAIILLPKEVNMILLSATLPNYRQFADWIGAVKQREVFTLSTDR 645

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFR----EDNFVKLQDTFLKQKIGGRR-------- 296
           RPTPL+H++F       +L++D K +F+     + F  ++D         R+        
Sbjct: 646 RPTPLRHFLF--FHDKAFLLMDAKGRFQAGAYNEAFKHVRDK--GNPPAARKPPLNNAPQ 701

Query: 297 ---------------ENG--KASGRMAKGGSGSGGSDIFKIVKMI--MERKFQ-PVIVFS 336
                          ++G  ++S  + +       ++I ++  MI  +E+  + PV+VF 
Sbjct: 702 RGRGGARGGARATSVQDGAHQSSKGVYQTAEAKLKTEIHRLQGMIAKLEKDNELPVVVFC 761

Query: 337 FSRRECEQHAMSMSKLDFN-TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           FSRR+CE +A +M KL+   +  ++  +    ++ +  L+  DR LP I  +  L++RG+
Sbjct: 762 FSRRKCETYAQAMRKLNVVLSHNDRSKIHLFVKDCLMALSPADRELPQIRFVCSLVQRGV 821

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
            +HH GLLP+IKE+VE+LFQ GLV+ LFATET A+GLNMPA++VVF+A+KK DG   R +
Sbjct: 822 GIHHGGLLPIIKEMVEILFQRGLVRVLFATETLAIGLNMPARSVVFSALKKHDGQRSRML 881

Query: 456 GSGEYIQMSGRAGRRGKDDRG-ICIIMVDEQMEMNTLKDM 494
            + EY QM+GRAGRRG D  G + I   D+  +   L+++
Sbjct: 882 LASEYTQMAGRAGRRGIDTFGHVYIFCSDDIPDPKALREL 921



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 142/253 (56%), Gaps = 10/253 (3%)

Query: 705  DLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELK 764
            DL ++I +  +K FA PL     E  ++   RK E+  EI ++ S++ +  +  +  E++
Sbjct: 1121 DLFSKIRQ--NKCFACPLR----ETHMQLTSRKRELMDEIAEISSQLHEESLDLY-PEMQ 1173

Query: 765  NRSRVLKKLGHIDAD-GVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
             R  VLKKL  ID D G + +KGR AC + +GDEL +TE +F G   +L+  ++AA+ S 
Sbjct: 1174 ARLTVLKKLKLIDEDSGTLTVKGRVACQVMSGDELTLTEFIFQGGLENLEPEEIAAVLSA 1233

Query: 824  FIPVDKSSEQINLRME-LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV 882
            F+  D   EQ+      + +   Q +E    I ++Q    + VN +++ +      L  V
Sbjct: 1234 FVAPDGPVEQVPAPTAGIQRARDQAEEIHVAILKLQANSGVRVNAEDWWK-LCNFSLSLV 1292

Query: 883  IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
             Y W+ G +F +++Q T+  EGSI+R+  RLDE L ++R AA  +G+ +L  K    S+ 
Sbjct: 1293 AYDWANGVSFGDIMQKTNAQEGSIVRAILRLDELLRKIRQAAVLIGDPDLGAKLQLTSDR 1352

Query: 943  LRRGIMFSNSLYL 955
            +RR I+F+ SLYL
Sbjct: 1353 IRRDIVFAMSLYL 1365


>gi|411120335|ref|ZP_11392709.1| superfamily II RNA helicase [Oscillatoriales cyanobacterium JSC-12]
 gi|410709716|gb|EKQ67229.1| superfamily II RNA helicase [Oscillatoriales cyanobacterium JSC-12]
          Length = 898

 Score =  364 bits (935), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 274/901 (30%), Positives = 453/901 (50%), Gaps = 87/901 (9%)

Query: 62  NPVYNG-EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQ 120
           +P  +G ++ + + F+LD FQ+ ++A LE   SV+V A T +GKT + EYAI  A    +
Sbjct: 12  SPTESGLDLNQLFPFQLDEFQKRAIAALEAGRSVVVCAPTGSGKTLIGEYAIYRALARDR 71

Query: 121 RVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE 178
           RV YT+PLKALSNQK R+  + F    VGL+TGDV+++ +A  LVMTTEI R MLY G+ 
Sbjct: 72  RVFYTTPLKALSNQKLRDFREIFGTDQVGLLTGDVSINRDAPILVMTTEIFRNMLY-GTP 130

Query: 179 V------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEW 232
           +      L  V  V+ DE HYM DR+RG VWEESII+ P  I++V LSAT+ N+ Q  +W
Sbjct: 131 IGEVGTSLVGVEAVVLDECHYMNDRQRGTVWEESIIYCPADIQLVALSATVDNSDQLTDW 190

Query: 233 ICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQK 291
           I  +H  P  ++Y+DFRP PLQ HY  P    GL+ ++D+ ++                +
Sbjct: 191 IQQVHG-PTELIYSDFRPVPLQFHYCTP---KGLFPLLDDTQK----------------R 230

Query: 292 IGGR-RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
           I  R +  G  +GR+ K         +  ++  + +R   P I F FSRR C+Q   ++ 
Sbjct: 231 IHPRLKPKGGQAGRVGKKSPRQESPSLAYVLSQLQQRDMLPAIYFIFSRRGCDQAVTNLG 290

Query: 351 KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
            + F  + E   +++     +D   E +        + PL  RGIA HH+GLLP  K LV
Sbjct: 291 DISFVDRNEAIQLKE----QIDAFLERNPEAGRAGQVEPLY-RGIAAHHAGLLPAWKGLV 345

Query: 411 ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
           E LFQ+GL+K +FATET A G+NMPA+T V +++ K     HR + + E++QM+GRAGRR
Sbjct: 346 EELFQQGLIKVVFATETLAAGINMPARTTVISSLSKRTDLGHRLLNASEFLQMAGRAGRR 405

Query: 471 GKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVI 530
           G D  G  + +            +      PLVS F  SY  +LNL+ +      A+ +I
Sbjct: 406 GMDVLGHVVTVQTPFEGAREAAYLATAGADPLVSQFTPSYGMVLNLL-QTHTLDEAKELI 464

Query: 531 KNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE----VAEYHKLKLDIAQLEKKLM 586
           + SF Q+     L    + ++ LE E A L A  E+     +A+Y KL+  + +  + L 
Sbjct: 465 ERSFGQYLATLYLRPQQEAIAHLEAELAQLQAQVESVDWELLAQYEKLQERLKEERRLLK 524

Query: 587 SEITRPERV--------LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP---- 634
              ++ + V        L +  +G ++ ++         +   +V K +AG G  P    
Sbjct: 525 ILQSQADDVRMHDMAIALSFAVAGTILSLKGQYVPVPEPISAVLVTK-TAGAGQFPYLVC 583

Query: 635 --SRGGGYIVPV--------QLPLISTLSKIRLSVPPD--LRPLDARQSILLAVQELESR 682
                  Y+  V        ++P I  +    L++PP+  L+P  +R+      + +  R
Sbjct: 584 LGQDNRWYVTTVSDVVDLRAEIPRIVAVD--HLTLPPEMPLKPGQSRKGS-AETEAIAER 640

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNH 742
            P  +P  N         PEV     +++E+E ++  HP+++  +   I   Q++ +  H
Sbjct: 641 LPDPVPSANSA-------PEVHTQQQRLQEVERQIQNHPVHRWSNRGTILKRQKRIQSIH 693

Query: 743 -EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            E+Q  + K+ D Q  ++ +   +   +L+  G ++ + V    G     I   +EL + 
Sbjct: 694 TELQDRREKL-DRQSHRYWEAFLDLIDILRNFGCLE-ELVPTALGEVTAAIRGDNELWLG 751

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE--IQN 859
             + +G F+DL+ H  AA  +  +  + S      R +L  P+++     R I     + 
Sbjct: 752 LALTSGEFDDLEPHHFAAACAALV-TEVSRPDSWTRYDLPSPVEEALGGLRGIRHSLFKL 810

Query: 860 ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
           + + +V +  ++E       + ++  W+ G+ +  + + T + EG I+R  RR  +FL+Q
Sbjct: 811 QRRYQVVLPIWLEYD----FVGLVEQWALGSDWLALCENTSLDEGDIVRVLRRTLDFLSQ 866

Query: 920 L 920
           +
Sbjct: 867 I 867


>gi|433605012|ref|YP_007037381.1| putative helicase [Saccharothrix espanaensis DSM 44229]
 gi|407882865|emb|CCH30508.1| putative helicase [Saccharothrix espanaensis DSM 44229]
          Length = 918

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 277/913 (30%), Positives = 450/913 (49%), Gaps = 69/913 (7%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFELDPFQ+ +   LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+KALSN
Sbjct: 32  SFELDPFQQRACEALEDGHGVLVCAPTGAGKTVVGEFAVHLALSEGRKCFYTTPIKALSN 91

Query: 134 QKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QKY +L   + +  VGL+TGD +++ NA  +VMTTE+LR MLY GS  L  +A+V+ DE+
Sbjct: 92  QKYADLVARYGEGKVGLLTGDTSVNGNAPVVVMTTEVLRNMLYAGSSTLNSLAYVVMDEV 151

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE I+ LP ++++V LSAT+SNA +F EW+  + +    VV  + RP 
Sbjct: 152 HYLADRFRGPVWEEVILHLPESVRLVGLSATVSNAEEFGEWLVEV-RGDTTVVVDEHRPV 210

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQ----FREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           PL  ++   GG  + L   E  +             +D F       R +N K  GR  +
Sbjct: 211 PLWQHML-AGGRMMDLFAGEDAEGATRLNPQLLRHTEDLFRYHVPWSRNKNNK--GRPPR 267

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVF 367
           G SG        IV+ +      P I F FSR  C+       +       E +   +V 
Sbjct: 268 G-SGFKPPSRVDIVQRLDGAGLLPAIDFVFSRAGCDAAVGQCVRAGLRLTAEAEV--EVI 324

Query: 368 QNAVDCLNEEDRNLPAIELML-------PLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           +  +D    + R+LP  +LM+         L+RGIA HH+GLLP  KE VE LF  GLVK
Sbjct: 325 REIIDS---KTRDLPQGDLMVLGYWEWRDALERGIASHHAGLLPAFKETVEELFVRGLVK 381

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G  ++
Sbjct: 382 VVFATETLALGINMPARTVVLEKLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHAVV 441

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    ++   +  +   +  PL S+FR  Y   +NL+++  G   A  +++ SF QFQ +
Sbjct: 442 VWQPGIDPKAVAGLASTRTYPLRSSFRPGYNMAVNLVNQL-GAAAAREILEQSFAQFQAD 500

Query: 541 KALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKLMSEITRPERV-- 595
           +++  + +++ +  E  A    +      +  EY  L+  +A  EK L  + +   R   
Sbjct: 501 RSVVGLARRLDRNREALAGYAEAMSCHLGDFTEYASLRRRVADREKALARQNSSARRAEA 560

Query: 596 ---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL---PSRGGGYIVPVQLPL- 648
              L  L  G +I V  G    G  VV++   +P      L     R  G +     PL 
Sbjct: 561 ASSLERLRKGDVIAVPSGRRS-GLAVVIDPGLEPLGEARPLVVTEDRWAGRLSSADFPLP 619

Query: 649 ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGL--PKLNPVKDMKIEDPEVVDL 706
           +  L  ++L    D R   +R+ +   ++        G+  P L   +    +D E    
Sbjct: 620 VEVLGHVKLPRQVDTRSPKSRRDLASTLRN------TGIVAPSLRKRRSTADDDAE---- 669

Query: 707 VNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
              +  L   L AHP +  +  E+  R  +R   +  E +QL+ K+  +     R+  + 
Sbjct: 670 ---LATLRRALRAHPCHGCEKREDHARWGERYHRLLAETEQLERKVAATTHSLAREFDRI 726

Query: 766 RSRVLKKLG--HIDADGV---VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
           R  +L++ G  H   +G    V   G+    + +  +LL  E + +G +  LD  ++AA+
Sbjct: 727 RG-LLRERGYLHEQENGPGEEVTEHGKRLTRLYSESDLLAAECLRHGVWRGLDPGELAAV 785

Query: 821 ASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLM 880
            S  +   +    +  R+   K    +  +AR  AE++++ +    +D   +    P   
Sbjct: 786 VSSLVYEARRDGPLETRLPPGKVDDAMTATARLWAELEDDERRH-KLDRTRQPD--PGFA 842

Query: 881 DVIYCWSKGATFAEVIQM-----TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
             +Y W++G +  +V+       T++  G  +R  R++ +FL+Q+R        V    +
Sbjct: 843 WPVYRWARGESLEKVLSSSEASGTELGAGDFVRWCRQVIDFLDQIRDVVGGGDPVGATAR 902

Query: 936 FAAASESLRRGIM 948
              A ++LRRG++
Sbjct: 903 --KAVDALRRGVV 913


>gi|167385175|ref|XP_001733370.1| helicase [Entamoeba dispar SAW760]
 gi|165900019|gb|EDR26481.1| helicase, putative [Entamoeba dispar SAW760]
          Length = 1029

 Score =  364 bits (934), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 285/928 (30%), Positives = 461/928 (49%), Gaps = 87/928 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +M + Y FELD FQ+ ++  +E +E V V AHTSAGKTA AEYAIA+A     + IYTSP
Sbjct: 70  DMKRKYDFELDRFQKQAIYHMELDEHVFVIAHTSAGKTATAEYAIAIAKSKGMKAIYTSP 129

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCL-VMTTEILRGMLYRGSEVLKEVAWV 186
           +KALSNQKY +  + F  VG+MTGDV +      + +MTTEILR  LY+ S+ +++V WV
Sbjct: 130 IKALSNQKYYDFRKIFGKVGIMTGDVVIQGEDDLVTIMTTEILRSKLYQDSKFIEQVDWV 189

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERGVVWEE           V +S                          
Sbjct: 190 IFDEVHYVNDEERGVVWEE-----------VIMSXXXXXXXXXXXXXXXXXXXXXXXXXX 238

Query: 247 DFRPTPLQHYVFPVGGSGL--YLVVDEKEQFREDNFV-KLQDTFLKQKIGGRRENGKASG 303
                   HYVF      L   L++ +K    E+NF+ K  +   ++ +    +N +   
Sbjct: 239 XXXXXXXXHYVFCKKKEELPSKLILFKK---GENNFIGKNYNEAYERIVPKFSKNRRVKD 295

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK-LDFNTQEEKDT 362
           ++       G + I +++  +      P + F FSRR    +A  ++K   F+T   K  
Sbjct: 296 QL------HGVNSIEELINYLEHDTKLPAVFFIFSRRLVMDYAKKLAKATKFDTNPYK-- 347

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           +  +F+   + L + ++NLP I  +  LL RG+ VHH+GL+P +KE+VE+LF +G +K L
Sbjct: 348 INSLFKEMTEGLVDSEKNLPQISEVKSLLMRGVGVHHAGLIPFLKEIVEVLFSQGDIKVL 407

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATETFAMG+NMPAK+V+F +V+K+DG  +R++  GEY QM+GRAGRRGKD  G  II  
Sbjct: 408 FATETFAMGVNMPAKSVIFPSVEKFDGKENRFLLPGEYTQMAGRAGRRGKDAAGNVIIFP 467

Query: 483 DEQM-EMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
           ++ +     ++++  G PA ++S F ++Y+ +LN +    G    + ++K+      +E 
Sbjct: 468 NQILPSPKQMQEISCGAPAKMISQFYITYWMMLNWVCFG-GDDLTQQMMKSYSKIDLFEM 526

Query: 542 A-LPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLG 600
           A   ++ ++  KL +   ++  + E +    H   LD+ + E K + +    E +   L 
Sbjct: 527 AQRNNLAEEAKKLLQHTTTVCGNPECD----HD-ALDLIKKEIKDIKKEITREIIEAKLK 581

Query: 601 -------SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLS 653
                  +GR+IKVR G     +GV++  +   S        +G    +     L S + 
Sbjct: 582 GGNNFNINGRVIKVRAGNEKRYYGVIIEPLDNGSMVYYFDEKKGVNEFI-----LFSDMV 636

Query: 654 KIRLSVPPDLRPLDARQSILLAVQELESRFPQGL--------------PKLNPVKDMKIE 699
            I           D  +++L    E+E+   Q L              P   P ++ K  
Sbjct: 637 AIYQKQFKAKGGNDYSEALL----EIENNQRQALYDRLVGFKKNRGKEPFFQPYQNEKKR 692

Query: 700 DPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA-EVNHEIQQLKSKMRDSQIQK 758
                 L+ Q  E    + A P           C   K+ E   + Q+   KM D    K
Sbjct: 693 PEGYTLLLKQYNEDTKIMKAMP--------AYTCIAYKSGEQEDKAQRQLEKMIDEITGK 744

Query: 759 FR-------DELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           ++        EL  R  VLK    +D   ++ LKG+ A  + + D +++T +MF+G  N 
Sbjct: 745 YQMNKERVDRELNLRLEVLKHFNFVDEHNLLTLKGKVAKEMVSSDGMILTNMMFDGVLNQ 804

Query: 812 LDHHQVAALASCFI--PVDKSSEQI--NLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
           L+ H++AA+ S F+  P ++S E++  +   +    L  + + A KI + +N  K+E N+
Sbjct: 805 LEVHEMAAIFSVFVFEPSNESQEELIDHFSFQTKALLNLVDQYAMKIVDYENSLKMEYNI 864

Query: 868 DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
           ++YV+  +   LM+ +  W+    F EVI+ +   EG I+R   R+++   ++  A+Q +
Sbjct: 865 EKYVK--LNYGLMEGVALWALRKPFNEVIESSATTEGLIVRCVLRMEQVCEEVIKASQII 922

Query: 928 GEVNLEKKFAAASESLRRGIMFSNSLYL 955
           G   L  K       L+R I+   SLYL
Sbjct: 923 GNEELLNKTTQLYGLLKRDIINVKSLYL 950


>gi|396584518|ref|ZP_10484977.1| DEAD/DEAH box helicase [Actinomyces sp. ICM47]
 gi|395547799|gb|EJG15195.1| DEAD/DEAH box helicase [Actinomyces sp. ICM47]
          Length = 921

 Score =  363 bits (933), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 285/959 (29%), Positives = 460/959 (47%), Gaps = 85/959 (8%)

Query: 29  KKQRNLTRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACL 88
           + +R   R+ V E +    YA  ++ A     A     G      SF  DPFQ  ++  +
Sbjct: 14  RVERTEERTSVGEGSAAQRYAAFQEHA----RAASSLRGRWVAGLSFTPDPFQLDALDAI 69

Query: 89  ERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDV 146
           E   SVLV+A T AGKT V ++   +A +   R  YT+P+KALSNQKY EL   +   +V
Sbjct: 70  EAGNSVLVAAPTGAGKTIVGQFGAYVALQRGMRAFYTTPIKALSNQKYLELCDLYGADNV 129

Query: 147 GLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEES 206
           GL TGD +++  A  +VMTTE+ R M+Y G+  L ++  V+ DE+HY+ D+ RG VWEE 
Sbjct: 130 GLATGDTSINSKAPVVVMTTEVCRNMIYAGAS-LDDLGVVVLDEVHYLADKMRGPVWEEV 188

Query: 207 IIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL-QHYVFPVGGSGL 265
           II LP  + ++ LSAT+SNA +F  WI  + +  C ++ ++ RP PL QH +       L
Sbjct: 189 IIHLPAHVSIIALSATVSNAEEFGAWIREV-RSSCEIIVSEQRPVPLYQHMIVGEDIFDL 247

Query: 266 YLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIM 325
           Y     K +   +      D+ ++   G R  N     R  +    S  S +  + +   
Sbjct: 248 YAPTG-KRKLNPELVAATNDSGMRGGRGSRSWN-----RPVRVRRESRPSTLISLDRA-- 299

Query: 326 ERKFQPVIVFSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPA 383
                P I F FSR  CE     + ++++   T+ E   +E+     +  +  ED  +  
Sbjct: 300 --HLLPAITFIFSRAGCEDAVRQVLLTRITLTTRSEAAEIERYVDEVIALIAPEDAVVLG 357

Query: 384 IELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTA 443
           ++     L RGIA HH+G+LP++KE VE LF +GLVK ++ATET A+G+NMPA+TVV  +
Sbjct: 358 VDAWKRGLMRGIAAHHAGMLPLMKEAVEHLFSQGLVKMVYATETLALGINMPARTVVIES 417

Query: 444 VKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLV 503
           + KW+G +H  + +GE+ Q+SGRAGRRG D  G  ++     +    +  +   +  PL+
Sbjct: 418 LTKWNGSAHVSLSAGEFTQLSGRAGRRGIDTEGHAVVSHRGGVAPEEVAALASKRTYPLI 477

Query: 504 STFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE--EEAASLD 561
           S F  +Y  ++NL++R+    T   V+++SF QFQ + A+  +  ++++LE  + A + D
Sbjct: 478 SAFTPTYNMVVNLLARSTRTQT-RKVLESSFAQFQADSAVVQLATRLTELEARQHAIADD 536

Query: 562 ASGEA-EVAEYHKLKLDIAQLEK---KLMSEITRPE--RVLYYLGSG-----------RL 604
            +  A +V EY  L+  I+Q EK   +     TR E  RVL  +  G           RL
Sbjct: 537 LTCSAGDVGEYLTLRDRISQAEKSGARARKRETRDESRRVLAGVRPGDVLALIRGRKTRL 596

Query: 605 IKVREGGTDWGWGVVVNVVKKPSAGVGTLPS--RGGGYIVPVQLPLISTLSKIRLSVPPD 662
             V    T     V V+V+ + +      P   RGG          I+ +  + +     
Sbjct: 597 CVVGAKATSASGRVEVSVIAEDATWRALAPEDVRGG----------IAVVGHMSIPGGSA 646

Query: 663 LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
           LR    R  I     EL S   +G   L P +     D         I EL   + AHP 
Sbjct: 647 LRRTKERTRI---AGELRSGAAKGCYPL-PAQASGEAD--------TIGELRAAMRAHPA 694

Query: 723 NKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
           ++    E   R   + A +  EI  L+  + DSQ             VL++LG +D D V
Sbjct: 695 HRCPHREEHARAGAQWARLGREIDLLRRSI-DSQTGSVAAHFDRVCAVLERLGFLDGDRV 753

Query: 782 VQLKGRAACLIDTGDELLVTELMFN-GTFNDLDHHQVAALASCFIPVDKSSEQIN----- 835
                R   +   G+  LV  +  N G +NDLD  ++A++ S  +   +S +  N     
Sbjct: 754 TASGERLRRIF--GERDLVIAMSLNEGAWNDLDEAELASMVSALVYDSRSDDDANELAPT 811

Query: 836 -LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAE 894
            + + L    ++   +  ++  ++ +C  +         ++   LM     W+ G+T A 
Sbjct: 812 GVGIRLRTAWEESLGTLARVHRVEKQCGCDPT------PSLDAGLMSATLAWAHGSTLAT 865

Query: 895 VIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            I  TDI  G  +R  R++ + L Q+   A +V   +L ++  AA + + RGI+  +++
Sbjct: 866 AIDGTDIQAGDFVRWMRQVMDCLGQI---ASSVPTSDLARRAEAAKDRIGRGIVAWSTI 921


>gi|295395917|ref|ZP_06806102.1| DEAD/DEAH box family ATP-dependent RNA helicase [Brevibacterium
           mcbrellneri ATCC 49030]
 gi|294971190|gb|EFG47080.1| DEAD/DEAH box family ATP-dependent RNA helicase [Brevibacterium
           mcbrellneri ATCC 49030]
          Length = 894

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 288/936 (30%), Positives = 468/936 (50%), Gaps = 83/936 (8%)

Query: 49  ALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVA 108
           A  + +A  GT   P+   E     SFELD FQ  + + L    SVLV+A T AGKT VA
Sbjct: 9   AYAQFQAKKGTMTGPL--AEFRNELSFELDDFQLRACSALNDGRSVLVAAPTGAGKTIVA 66

Query: 109 EYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTT 166
           ++A+ +A     RV YT+P+KALSNQK+ EL   +  + VGL+TGDV++  +A  +VMTT
Sbjct: 67  QFAVKLAVSRGVRVFYTAPIKALSNQKFNELCDAYGEESVGLLTGDVSIRRDAQIMVMTT 126

Query: 167 EILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNA 226
           E+LR M+Y G++ L ++ +V+ DE+HY+ DR RG VWEE II LP  + +V LSAT+SNA
Sbjct: 127 EVLRNMIYSGTD-LSDLGFVVLDEVHYLGDRFRGPVWEEVIIHLPIHVLLVSLSATVSNA 185

Query: 227 TQFAEWICHLHKQPCHVVYTDFRPTPLQHY------VFPVGGSGLYLVVDEKEQFREDNF 280
            +F  W+  + +    V+ ++ RP PL ++      +FP+     Y V  E E++    F
Sbjct: 186 EEFGAWLAEV-RGSTDVIVSEHRPVPLHNHACVGTDIFPLFAPRGYNVNKELERYVR-RF 243

Query: 281 VKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRR 340
                    Q   G R  G+   R  +    S       +++ +      P I F FSR 
Sbjct: 244 ---------QPSPGNRRRGRYFTRFRRPARSS-------VIEALGSANLLPAIFFIFSRN 287

Query: 341 ECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVH 398
            C+          +D  +  EK  + +   +  + L  ED  +         L +GI VH
Sbjct: 288 GCDDALEQCLAGGVDLTSTREKQEIARRLDDLSEELPAEDLGVLGFHNFSAGLMQGIGVH 347

Query: 399 HSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSG 458
           H+GL+P  KE+VE LF  GL++ +FATET A+G+NMPA+TVV   + K++G+SH  I  G
Sbjct: 348 HAGLIPQFKEIVEELFVRGLLRVVFATETLALGINMPARTVVLEKLTKFNGESHVQITPG 407

Query: 459 EYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS 518
           EY Q++GRAGRRG D  G  + + + Q+E+  +  +   +   L S F  +Y    NL++
Sbjct: 408 EYTQLTGRAGRRGIDVEGHAVTVWNPQIELADIAALASKRTYALKSQFTPTYNMAANLLA 467

Query: 519 RAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLK 575
           R   +  A+ V++ SF Q+Q + A+  + ++V   EE  A  +++ E    + +EY  L+
Sbjct: 468 RMTSE-DAKKVLETSFAQYQADAAVVGLARRVRSKEETLAGYESAMECSYGDFSEYAGLR 526

Query: 576 LDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKV--REGGTDWGWGVVVNVVKKPSA 628
             IAQLEK+  ++ ++  +      L +LG G  I +  R G   +G  VV+  ++    
Sbjct: 527 RTIAQLEKRASNQRSKLRQRDVIESLSHLGVGDTIFIPSRRG---FGACVVLQALRNDDH 583

Query: 629 GV--GTLPSRGG--GYIVP--VQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
           GV   T+ +  G   ++ P  V  P +  L +I+L    + R +  R+ +   V   ES 
Sbjct: 584 GVRLPTVLTESGKVWHLRPHEVTEPAVK-LGRIKLPKKFNHRVVAHRRQVQAIV---ESA 639

Query: 683 FPQG-LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEV 740
             +G L     V   K + P V    ++I+ +  +L  HP ++  D E   R  +R A+V
Sbjct: 640 LDEGRLKDPAAVPRSKHKAPTVGQ--DEIQLVRQQLRDHPCHECPDRETHARWAERVAKV 697

Query: 741 NHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
             E+  L  ++  R S I    D + N   VL  L  +  D  +  +      I    +L
Sbjct: 698 EKELSSLTHQIEGRTSSIAHVFDRVCN---VLVTLKFLPDDSWILRR------IYGERDL 748

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRM---ELAKPLQQLQESARKIA 855
           L    +  G ++ L   +VAALAS  +   +  E    R+    L K   +LQ+   ++ 
Sbjct: 749 LTAMSVRAGIWDRLTEPEVAALASSLVYQARREEAGVPRLPSKHLQKAFGELQQLWNQLF 808

Query: 856 EIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDE 915
            I+ + +L +  +        P +M  I+ W++G T +  +   +   G  +R A++  +
Sbjct: 809 HIETDSRLPITPEP------DPGMMKAIFAWTEGKTLSSAMGSAEFSAGDFVRWAKQTLD 862

Query: 916 FLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
            L Q+    + V E +  K    A+ S+RRG++  +
Sbjct: 863 LLGQV----ENVVEPSTAKVIKRAAMSIRRGVVLDS 894


>gi|293192805|ref|ZP_06609700.1| putative ATP-dependent RNA helicase [Actinomyces odontolyticus
           F0309]
 gi|292820052|gb|EFF79050.1| putative ATP-dependent RNA helicase [Actinomyces odontolyticus
           F0309]
          Length = 922

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 285/916 (31%), Positives = 450/916 (49%), Gaps = 79/916 (8%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
            T SF  DPFQ  ++  +E   SVLV+A T AGKT V ++   +A     R  YT+P+KA
Sbjct: 53  STLSFTPDPFQIQALDAVEAGSSVLVAAPTGAGKTIVGQFGAYVALEQGMRAFYTTPIKA 112

Query: 131 LSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQKY EL   +   +VGL TGD +++  A  +VMTTE+LR M+Y G+  L ++  VI 
Sbjct: 113 LSNQKYLELCDLYGADNVGLATGDTSVNSGAPVVVMTTEVLRNMIYAGAS-LNDLGVVIL 171

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D+ RG VWEE II LP  + ++ LSAT+SNA +F  WI  + +  C ++ ++ 
Sbjct: 172 DEVHYLADKMRGPVWEEVIIHLPAHVAIIALSATVSNAEEFGAWIREV-RSTCEIIVSEK 230

Query: 249 RPTPL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           RP PL QH +       LY     K +   +     +D+ ++   G R  N +   R   
Sbjct: 231 RPVPLYQHMIVGEDIFDLYAPAG-KGKLNPELVAATRDSGMRGGRGSRSWNREVRVRRES 289

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQ 365
             S         ++ +   R   P I F FSR  CE     +  +++   T+ E   +E 
Sbjct: 290 RPS--------TLISLDRAR-LLPAITFIFSRAGCEDAVRQILSTRITLTTRSEAAEIES 340

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
                +  L  ED  +   E     L RGIA HH+G+LP++KE VE LF  GLVK ++AT
Sbjct: 341 YVDEVIALLPPEDAIVLGAEAWKRGLMRGIAAHHAGMLPLMKESVEHLFSRGLVKMVYAT 400

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A+G+NMPA+TVV  ++ KW+G +H  + +GEY Q+SGRAGRRG D  G  ++     
Sbjct: 401 ETLALGINMPARTVVIESLTKWNGSAHVSLSAGEYTQLSGRAGRRGIDTEGHAVVSHRGG 460

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           +    +  +   +  PL+S F  +Y  ++NL++R+    T   V+++SF Q+Q + A+  
Sbjct: 461 VAPEEVAALASKRTYPLISAFTPTYNMVVNLLARSTRAQT-RKVLESSFAQYQADSAVVV 519

Query: 546 IGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEK---------------K 584
           +  ++++LE   A  DA+ E       +V EY  L+  + Q EK               +
Sbjct: 520 LASRLTELE---AQRDATAEDLSCSHGDVREYLTLRDQLGQAEKSGARARKREARDELRR 576

Query: 585 LMSEITRPERVLYYLGSGR---LIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI 641
           L+S + RP  VL  L  GR   L  V    T       V+V+ + +      P    G I
Sbjct: 577 LLSGV-RPGDVLA-LTRGRKTRLCVVGAKATSASGRAQVSVIGEDATWRALAPEDVRGAI 634

Query: 642 VPVQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIE 699
             V            +S+P    LR    R  I     EL S   +G+ ++ P +  +  
Sbjct: 635 AVVG----------HMSIPGGSALRRTKERTRI---AGELRSGAAKGIYEV-PAEPTQAS 680

Query: 700 DPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQK 758
           DP        +  L   +  HP+++    E   R   + A +  EI +L+S + DSQ   
Sbjct: 681 DP--------VSALRVAMRQHPVHRCPHREEHARAGAQWARLAREIDRLRSSI-DSQTGS 731

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
              +      VL++LG +  D V     R   +    D L+V   M  GT+N+LD  ++A
Sbjct: 732 VAAQFDRVCAVLERLGFLAGDEVTDAGQRLRRIFGERD-LVVAMSMNEGTWNELDEAELA 790

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARK-IAEIQNECKLEVNVDEYVESTVRP 877
           ++ S  +  D  S+    ++  A    +LQE+  + +A ++   ++E      +  ++  
Sbjct: 791 SMVSALV-YDSRSDDDAQQLAPAGVGIRLQEAWHESLATLERVHRVEKACGCDLTPSLDA 849

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA 937
            LM     W+ G+T A  I  T I  G  +R  R++ + L Q+ A+A + GE  L +K  
Sbjct: 850 GLMAATLAWAHGSTLATAIDATPIQAGDFVRWMRQVMDCLGQI-ASATSSGE--LVRKAE 906

Query: 938 AASESLRRGIMFSNSL 953
           AA + + RGI+  +++
Sbjct: 907 AAKDRIGRGIVAWSTI 922


>gi|163840768|ref|YP_001625173.1| ATP-dependent DNA helicase [Renibacterium salmoninarum ATCC 33209]
 gi|162954244|gb|ABY23759.1| ATP-dependent DNA helicase [Renibacterium salmoninarum ATCC 33209]
          Length = 954

 Score =  363 bits (932), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 294/945 (31%), Positives = 470/945 (49%), Gaps = 93/945 (9%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
           +T+ F LD FQ  +   LE    VLV+A T AGKT V E+A+ +A     +  YT+P+KA
Sbjct: 40  ETFDFPLDQFQTDACTALESGRGVLVAAPTGAGKTIVGEFAVYLALSRGLKAFYTTPIKA 99

Query: 131 LSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQKY EL  ++   DVGL+TGD +++P AS +VMTTE+LR MLY GSE L ++A+VI 
Sbjct: 100 LSNQKYSELSAKYGTADVGLLTGDSSINPEASIVVMTTEVLRNMLYAGSEALDDLAFVIM 159

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ DR RG VWEE II LP  +++V LSAT+SNA +F  W+  + +    ++ ++ 
Sbjct: 160 DEVHYLADRFRGAVWEEVIIHLPSEVQVVSLSATVSNAEEFGAWLDTV-RGSTDIIVSEH 218

Query: 249 RPTPLQHYVFPVGGSGLYL-----------VVDEKE----------QFREDNFVKLQDTF 287
           RP PL  +V  VG   + L           VVD+ E            R ++  +L+  F
Sbjct: 219 RPVPLWQHVM-VGKDIVDLFAGDTSFDQLAVVDKNEVPAVNTELLQLARTESENRLRGRF 277

Query: 288 -----LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRREC 342
                 KQ  G +  N K S R     S    +   +++  +      P I F FSR  C
Sbjct: 278 SHGRGRKQSGGKQWNNRKNSARQDAPQSPGKAASRAQVILALDRADLLPAIYFIFSRAVC 337

Query: 343 EQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
           +        + L   T+ E+  +      A + +  +D ++         + RG+A HH+
Sbjct: 338 DAAVRQCVDAGLMLTTEAERQEITARIGMASEDIPSDDLDVLGFWSWRDGMLRGVAAHHA 397

Query: 401 GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
           G+LP  KE+VE LF +GLV+A+FATET A+G+NMPA++VV   ++K++G++H  + +GEY
Sbjct: 398 GMLPTFKEVVESLFADGLVRAVFATETLALGVNMPARSVVLEKLEKFNGEAHVNVSAGEY 457

Query: 461 IQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
            Q++GRAGRRG D  G  +++     +   +  + L +  PL S+FR +Y   +NL+++ 
Sbjct: 458 TQLTGRAGRRGIDIEGHAVVLWQPGTDPGAVAGLALRRTYPLNSSFRPTYNMSINLIAQF 517

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLD 577
            G+  A  ++++SF QFQ ++++  + ++VS  EE  A    S      + AEY +L+ +
Sbjct: 518 -GRSRAHEILESSFAQFQADRSVVGLARQVSSREEALAGYQDSMTCHLGDFAEYSRLRRE 576

Query: 578 IAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVN---VVKKPSAG 629
           ++ +E     +  R  R      L  L +G +I++  G    G+ VV+N    V +P   
Sbjct: 577 LSDVETAASKQQNRARRGIVDESLARLRAGDVIEISAGRMP-GFAVVLNNDTQVHEPRPT 635

Query: 630 V---GTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE-LESRFPQ 685
           V   G    R   + +   +  I TL   R+    D+R    R+ ++ A++  + S  P 
Sbjct: 636 VLTEGKETRRINRHDLDGPVTPIKTL---RIPKQFDVRQPKDRKDLVAALRHAIASASPM 692

Query: 686 GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEI 744
             P   PV      D    +   +I  L  KL  HP +   D E   R  +R  ++  E 
Sbjct: 693 TAP---PV----FGDTRQAEQEAKIALLRRKLRGHPCHSCSDREAHARWSERWWKLRSET 745

Query: 745 QQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK----GRAACLIDTGDEL 798
             L  K+  R   I K  D +     VL+  G +++    +L+    G+    I    +L
Sbjct: 746 DVLVRKIQGRTGTIAKTFDRV---CAVLEGYGFLESKPGGELRPSQDGQRLRRIYGEKDL 802

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP-------LQQLQESA 851
           L+   +  G   DLD  ++AA AS  +   K  E+  LR  +  P       +   Q SA
Sbjct: 803 LIALCIREGALADLDAVELAAFASALVYQAKREER-GLRPRMPSPSIDAAIDIVVQQWSA 861

Query: 852 RKIAEIQNECKLEVNVDEYVESTVRPFLMDV--IYCWSKGATFAEVIQMTDIFEGSIIRS 909
            +  E Q++  L          T  P L  V  ++ W++G     V++ TD+  G   R 
Sbjct: 862 LEDQESQSKLPL----------TSEPELGLVWPMFKWARGRHLEAVLEGTDLAAGDFFRW 911

Query: 910 ARRLDEFLNQLRAAAQAVG-EVNLEKKFAAASESLRRGIMFSNSL 953
            +++ + L+QL   A   G  + +     AA E +RRG++  +SL
Sbjct: 912 TKQVIDLLDQL---ASVPGLPIEIRSNCVAAIERVRRGVVAYSSL 953


>gi|154508797|ref|ZP_02044439.1| hypothetical protein ACTODO_01306 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798431|gb|EDN80851.1| DEAD/DEAH box helicase [Actinomyces odontolyticus ATCC 17982]
          Length = 922

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 284/915 (31%), Positives = 451/915 (49%), Gaps = 77/915 (8%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
            + SF  DPFQ  ++  +E   SVLV+A T AGKT V ++   +A     R  YT+P+KA
Sbjct: 53  SSLSFTPDPFQIQALDAVEAGSSVLVAAPTGAGKTIVGQFGAYVALEQGMRAFYTTPIKA 112

Query: 131 LSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQKY EL   +   +VGL TGD +++  A  +VMTTE+LR M+Y G+  L ++  VI 
Sbjct: 113 LSNQKYLELCDLYGADNVGLATGDTSVNSGAPVVVMTTEVLRNMIYAGAS-LSDLGVVIL 171

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D+ RG VWEE II LP  + ++ LSAT+SNA +F  WI  + +  C ++ ++ 
Sbjct: 172 DEVHYLADKMRGPVWEEVIIHLPAHVAIIALSATVSNAEEFGAWIREV-RSSCEIIVSEK 230

Query: 249 RPTPL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           RP PL QH +       LY     K +   +     +D+ ++   G R  N +   R   
Sbjct: 231 RPVPLYQHMIVGEDIFDLYAPTG-KGKLNPELVAATRDSEMRGGRGSRSWNREVRVRRES 289

Query: 308 GGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQ 365
             S         ++ +   R   P I F FSR  CE     +  +++   T+ E   +E 
Sbjct: 290 RPS--------TLISLDRAR-LLPAITFIFSRAGCEDAVRQILSTRITLTTRSEAAEIES 340

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
                +  L  ED  +   E     L RGIA HH+G+LP++KE VE LF  GLVK ++AT
Sbjct: 341 YVDEVIALLPPEDAIVLGAEAWKRGLMRGIAAHHAGMLPLMKESVEHLFSRGLVKMVYAT 400

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A+G+NMPA+TVV  ++ KW+G +H  + +GEY Q+SGRAGRRG D  G  ++     
Sbjct: 401 ETLALGINMPARTVVIESLTKWNGSAHVSLSAGEYTQLSGRAGRRGIDTEGHAVVSHRGG 460

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           +    +  +   +  PL+S F  +Y  ++NL++R+    T   V+++SF Q+Q + A+  
Sbjct: 461 VAPEEVAALASKRTYPLISAFTPTYNMVVNLLARSTRAQT-RKVLESSFAQYQADSAVVA 519

Query: 546 IGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEK---------------K 584
           +  ++++LE   A  DA+ E       +V EY  L+  + Q EK               +
Sbjct: 520 LASRLTELE---AQRDATAEDLSCSHGDVREYLTLRDQLGQAEKSGARARKREARDELRR 576

Query: 585 LMSEITRPERVLYYLGSGR---LIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI 641
           L+S + RP  VL  L  GR   L  V    T     V V+V+ + +      P    G I
Sbjct: 577 LLSGV-RPGDVLV-LTRGRKTRLCVVGAKATSASGRVEVSVIGEDATWRALAPEDVRGAI 634

Query: 642 VPV-QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
             V  +P+    +         LR    R  I     EL S   +G+ ++ P +  +  D
Sbjct: 635 AVVGHMPIPGGSA---------LRRTKERTRI---AGELRSGAAKGIYEV-PAEPTQASD 681

Query: 701 PEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
           P        +  L   +  HP+++    E   R   + A +  EI +L+S + DSQ    
Sbjct: 682 P--------VSALRVAMRQHPVHRCPHREEHARAGAQWARLAREIDRLRSSI-DSQTGSV 732

Query: 760 RDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
             +      VL++LG +  D V     R   +    D L+V   M  GT+N+LD  ++A+
Sbjct: 733 AAQFDRVCAVLERLGFLAGDEVTDAGQRLRRIFGERD-LVVAMSMNEGTWNELDEAELAS 791

Query: 820 LASCFIPVDKSSEQINLRMELAKPLQQLQESARK-IAEIQNECKLEVNVDEYVESTVRPF 878
           + S  +  D  S+    ++  A    +LQE+  + +A ++   ++E      +  ++   
Sbjct: 792 MVSALV-YDSRSDDDAQQLAPAGVGIRLQEAWHESLATLERVHRVEKACGCDLTPSLDAG 850

Query: 879 LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAA 938
           LM     W+ G+T A  I  T I  G  +R  R++ + L Q+ A+A + GE  L +K  A
Sbjct: 851 LMAATLAWAHGSTLATAIDATPIQAGDFVRWMRQVMDCLGQI-ASASSSGE--LARKAEA 907

Query: 939 ASESLRRGIMFSNSL 953
           A + + RGI+  +++
Sbjct: 908 AKDRIGRGIVAWSTI 922


>gi|428224981|ref|YP_007109078.1| DSH domain-containing protein [Geitlerinema sp. PCC 7407]
 gi|427984882|gb|AFY66026.1| DSH domain protein [Geitlerinema sp. PCC 7407]
          Length = 930

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 285/897 (31%), Positives = 445/897 (49%), Gaps = 99/897 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FELD FQR ++A LE   SV+V A T +GKT + EYAI  A    +RV YT+PLKALS
Sbjct: 53  FPFELDSFQRQAIAALEAERSVVVCAPTGSGKTLIGEYAIYRALSRGRRVFYTTPLKALS 112

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  + F  ++VGL+TGD +++ +A  LVMTTEI R MLY G+ +      L  V 
Sbjct: 113 NQKLRDFREMFGAENVGLLTGDASINRDAPILVMTTEIFRNMLY-GTPIGEVGTSLVGVE 171

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESII+ PP +++V LSAT++N+ Q  EWI  +H  P  ++
Sbjct: 172 AVVLDECHYMNDRQRGTVWEESIIYCPPDVQLVALSATVANSEQLTEWIHRVHG-PTELI 230

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y+DFRP PLQ     V   GL+ ++D       +N  K+     K + G +  N +    
Sbjct: 231 YSDFRPVPLQFGFSNV--KGLFPLLD-------NNQKKINPQLAKSRRGRKGGNQRVPQE 281

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE-KDTV 363
              G        +  +V  + ER   P I F FSRR C++   ++  +   T EE +   
Sbjct: 282 ECPG--------VTTVVGQLQERDMLPAIYFIFSRRGCDRAVEALGDMALVTPEEARQLR 333

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
           EQV  +A    N E   +  IE   PL  RG+A HH+GLLP  K  VE LFQ+GLVK +F
Sbjct: 334 EQV--DAFLARNPEVGRVSQIE---PLY-RGVASHHAGLLPAWKAFVEELFQQGLVKVVF 387

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATET A G+NMPA+T V +++ K     HR +   E++QM+GRAGRRG D  G  +    
Sbjct: 388 ATETLAAGINMPARTTVISSLSKRTDRGHRLLNPSEFLQMAGRAGRRGMDTMGYVVTAQT 447

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
                     +   +  PLVS F  SY  +LNL+ +      A  +++ SF Q+     L
Sbjct: 448 PFEGAREASYLATAQADPLVSQFTPSYGMVLNLL-QTHSVDEARELVERSFGQYLSTLYL 506

Query: 544 PDIGKKVSKLEEEAASLDASGEA----EVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
               + ++ LE E   L+A  E      +A Y KL   + + E++L+  + +    +   
Sbjct: 507 QPQQRAIADLEAEYEQLEAQIEEVDWDALAHYEKLSQRLKE-ERRLLKILQQQAEEVRTK 565

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKK--PSAGVGTLPSRGGG--------------YIVP 643
           G    +K    GT      ++++  K  P   V      G G              Y+V 
Sbjct: 566 GMVEALKFAVAGT------ILSIKGKAAPLPAVLVTKVHGSGQFPYLVCLGEDNRWYVVT 619

Query: 644 V--------QLPLISTLSKIRLSVPPD--LRPLDARQS---ILLAVQELESRFPQGL--P 688
                    ++P ++ +    L +PP+  L+P   R+S     +  + L  R   G+  P
Sbjct: 620 TGDVVALYGEIPRLAIVDD--LVLPPELPLKPGQVRRSSEETAIICELLRERLAVGIDDP 677

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK-AEVNHEIQQL 747
            L  +       PEV   + +  ELE +L AHP+++ ++   I   QR+ + +  EI Q 
Sbjct: 678 SLMSLA------PEVSGQLERATELEQELEAHPVHQWRNRASILKRQRRLSSLRSEINQR 731

Query: 748 KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
           + ++ D Q  +  +E  +   +L+  G +      ++ G A   I   +EL +   M +G
Sbjct: 732 QEEL-DRQSHRHWEEFLSLIDILQAFGCLHGYKPTEI-GEAIAAIRGDNELWLGMAMLSG 789

Query: 808 TFNDLDHHQVAALASCFIPVDKSSEQINLRM----ELAKPLQQLQESARKIAEIQNECKL 863
           +F+ L  H  AA  +  +  + S   I  R     E+ + L  L+   R++ ++Q   ++
Sbjct: 790 SFDALQPHHFAAACAALV-TEVSRPDIWTRYTSSPEVDEALNDLRGLRRQLFQLQRRHQV 848

Query: 864 EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            + +  ++E       + ++  W+  A + E+   T + EG ++R  RR  +FL+QL
Sbjct: 849 AMPI--WLEED----FISLVEQWALEADWVELCNNTSLDEGDVVRVLRRTLDFLSQL 899


>gi|427418494|ref|ZP_18908677.1| superfamily II RNA helicase [Leptolyngbya sp. PCC 7375]
 gi|425761207|gb|EKV02060.1| superfamily II RNA helicase [Leptolyngbya sp. PCC 7375]
          Length = 907

 Score =  363 bits (931), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 280/916 (30%), Positives = 450/916 (49%), Gaps = 139/916 (15%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + F+LDPFQ  ++  L + +SV+V A T +GKT V EYAI  A    +RV YT+PLKALS
Sbjct: 9   FPFQLDPFQVDAIEALNKGQSVIVCAPTGSGKTLVGEYAIHRAIHFNRRVFYTTPLKALS 68

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS-----EVLKEVAW 185
           NQK R+  ++F    VGL+TGD++++ +A  LVMTTEI R MLY  +     + +++V  
Sbjct: 69  NQKLRDFREQFGHNQVGLLTGDMSINRDAPILVMTTEIFRNMLYGTTMGEVGDAVQDVQA 128

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VI DE HYM DR+RG VWEESII+ PP I++V LSAT++N  Q  +WI  +H  P  ++Y
Sbjct: 129 VILDECHYMNDRQRGTVWEESIIYCPPEIQLVGLSATVANGDQLTDWIGKIHG-PSQLIY 187

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
           +DFRP PL  +     G G++ +++ K+         L D   K +   RR+ G+    M
Sbjct: 188 SDFRPVPLNMHFG--TGKGIFPLLNSKK-------TALHDQLKKHRKPPRRQKGQKKKAM 238

Query: 306 AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
           A G           +V  + ++   P I F FSR+ C++   S+S L      E   ++Q
Sbjct: 239 AAGNE--------FLVAQLQQKDMLPAIFFIFSRKGCDKAVQSISSLSLVNPAETRALKQ 290

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
                +   N E      +E   PL  RG+A HH+GLLP  K LVE LFQ GL+K +FAT
Sbjct: 291 RIDEFLTA-NPEAARAGQVE---PLY-RGVAAHHAGLLPAWKGLVEELFQAGLIKVVFAT 345

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A G+NMPA+T V +++ K     HR + + E++QMSGRAGRRG D  G  ++ V+  
Sbjct: 346 ETLAAGINMPARTTVISSLSKRTDSGHRLLHASEFLQMSGRAGRRGMDVEG-HVVTVETP 404

Query: 486 ME-MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF------- 537
            E       + L KP PLVS F  SY  +LNL+     + T + +++ SF Q+       
Sbjct: 405 FEGAREAGYLALAKPDPLVSQFTPSYGMVLNLLQTHSLEETRD-LVERSFGQYLSTLHLT 463

Query: 538 QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
             ++A+ D+   +  + E+ A++   G+ ++AEY KLK            E  R ER   
Sbjct: 464 PQQQAINDVEHNIELIREQLAAI---GDEQIAEYAKLK------------EHLREER--- 505

Query: 598 YLGSGRLIKV-REGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTL-SKI 655
                RL+K+  +  T+   G +  V+    A  GT+ S  G +I PV  P+ + L +K+
Sbjct: 506 -----RLLKILDQQATETLTGDLHTVIN--FAIAGTVLSLKGKHI-PVANPIPAVLVTKL 557

Query: 656 R------------------LSVPPDLRPLDARQSILLAVQEL------------------ 679
           +                  ++ P D+  L  +   + AV  L                  
Sbjct: 558 QGPNKVPYLVCLTGDNQWLMAAPRDVFALYEKYERIAAVDHLIPPDALTMKAGNTCPGDE 617

Query: 680 -----ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRC 733
                    PQ LP  + +       PEV +  +++  +E +L +HPLN+  + +  ++ 
Sbjct: 618 TTAAVAQAVPQELPTFDELA------PEVKEQRDRMLSVEAQLDSHPLNQFGKPKTLLKK 671

Query: 734 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
            QR + +  E+   ++K  +    ++  E  N   +L+  G ++ +      G+ A  I 
Sbjct: 672 QQRLSTLEAELSDRQAKY-NKYAGRYWQEFLNLMAILENFGGLENNQPTNF-GKMAAAIR 729

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFI---------PVDKSSEQINLRMELAKPL 844
             +EL ++  + +G F+ L  HQ AA+ +  +            ++S  +   +E  +  
Sbjct: 730 GENELWISLALGSGEFDHLPPHQFAAVCAAIVTEITRPDTWTQYRTSHAVTAALEGLRST 789

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
           ++     ++  ++     LE N+   VE+            W+    + E+ Q T + EG
Sbjct: 790 RRQIFQQQRRYQVTLPVSLEWNLIALVEA------------WALETEWNELCQNTSLDEG 837

Query: 905 SIIRSARRLDEFLNQL 920
            ++R  RR  + L Q+
Sbjct: 838 DVVRILRRTLDILAQI 853


>gi|428302129|ref|YP_007140435.1| DSH domain-containing protein [Calothrix sp. PCC 6303]
 gi|428238673|gb|AFZ04463.1| DSH domain protein [Calothrix sp. PCC 6303]
          Length = 894

 Score =  362 bits (929), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 276/899 (30%), Positives = 460/899 (51%), Gaps = 102/899 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FELD FQ  ++A L    SV+V A T +GKT + EYAI  A    +RV YT+PLKALS
Sbjct: 16  FPFELDQFQLDAIASLNAGSSVVVCAPTGSGKTLIGEYAIYRALSRGKRVFYTTPLKALS 75

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  + F   +VGL+TGD +++ +AS LVMTTEI R MLY G+ +      L +V 
Sbjct: 76  NQKLRDFRETFGQDNVGLLTGDASINRDASVLVMTTEIFRNMLY-GTPIGQVGISLTDVD 134

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESI++ P  +++V LSAT+ N+ Q  +W+  +H  P  ++
Sbjct: 135 AVVLDECHYMNDRQRGTVWEESIVYCPHEVQLVALSATVDNSDQLTDWLNQVHG-PTDLI 193

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y+DFRP PL+ Y       GL+ ++++ +            T +  ++  R++  K  G 
Sbjct: 194 YSDFRPVPLEFYFG--NTKGLFPLLNDSK------------THINPRLAQRKKR-KGDGD 238

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             + G     S I  ++  + +R   P I F FSRR C++    +  +     +E     
Sbjct: 239 RGRNGRPEAPS-INYVLSHLQQRDMLPAIYFIFSRRGCDKSVADVGDMWLVNPDE----- 292

Query: 365 QVFQNAVDCLNEEDRNLPAIEL-MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
             ++  V   +   RN  A     +  L RGIA HH+G+LP  K LVE LFQ+GL+K +F
Sbjct: 293 -AYKLRVQIDDFLTRNPDAGRAGHVGPLYRGIAAHHAGILPAWKVLVEELFQQGLIKVVF 351

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATET A G+NMPA+T V + + K   + HR + + E++QM+GRAGRRG DDRG  + +  
Sbjct: 352 ATETLAAGINMPARTTVISTLSKRTDNGHRLLNASEFLQMAGRAGRRGMDDRGYVVTLQT 411

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF------ 537
                     +   KP PLVS F  SY  +LNL+     + T E +I+ SF Q+      
Sbjct: 412 PFEGAKEASYLATSKPDPLVSQFTPSYGMVLNLLQTHTLEQTRE-LIERSFGQYLANFHL 470

Query: 538 --QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEI------ 589
             QYE     + +   +L E  A +DA  E E+A Y KL+  + ++E++L+  +      
Sbjct: 471 RPQYEY----LAELQRQLGETQAQIDAVNENELALYEKLRQRL-KVERQLLKTLQEQAVE 525

Query: 590 TRPERVLYYLG---SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI 641
            R E +   LG   +G ++ ++         V   ++ K SA  G  P          + 
Sbjct: 526 ARQEELGMMLGFAVAGTILGLKGKNIPVATPVTAALITK-SASSGQAPYLICLGSDNRWY 584

Query: 642 VPVQLPLISTLSKI-RLSVPPDL--------RPLDARQSILLAVQELESRF--PQGLPKL 690
           V     ++   ++  R+ VP +L        +P  +R+   L    + S    P+GL  L
Sbjct: 585 VATTGDVVELYAEFPRIDVPENLLPPAEMQIKPGHSRRGN-LETNAIASSIPEPEGLSYL 643

Query: 691 NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK---AEVNHEIQQL 747
                     PEV + ++++  ++ ++ AHPL +S   N    F+R+    E+  EI++L
Sbjct: 644 A---------PEVREQLSRVTAIQAQIEAHPLYQSG--NAASLFKRRNRVVELTVEIEEL 692

Query: 748 KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
           ++ ++  Q Q+  +E  N   +L++   + ++ +   +G+ A  I   +EL +   + +G
Sbjct: 693 EAHVQ-QQSQRHWEEFVNLIDILQQFDCL-SNLIPTQQGQIAAAIRGENELWLGLALSSG 750

Query: 808 TFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQ--NECK 862
             + LD  Q+AA+ +  +   P   S  + +L  E+ +   +LQ+  + + ++Q  +   
Sbjct: 751 EVDALDPQQLAAIVAALVTETPRPDSFVRFDLSAEVDEAWGRLQKIRKAVLKVQYRHGVA 810

Query: 863 LEVNVD-EYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           L V ++  Y+       ++ ++  W+ G  + E+ + T + EG ++R  RR  + L+Q+
Sbjct: 811 LPVGLEIRYIN------IISLVEQWALGVEWVELCEHTSLDEGDVVRILRRTLDLLSQI 863


>gi|354566612|ref|ZP_08985784.1| DSH domain protein [Fischerella sp. JSC-11]
 gi|353545628|gb|EHC15079.1| DSH domain protein [Fischerella sp. JSC-11]
          Length = 891

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 281/897 (31%), Positives = 455/897 (50%), Gaps = 95/897 (10%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           +  + FELD FQ  ++A L    SV+V A T +GKT V EY I  A    +RV YT+PLK
Sbjct: 13  SSVFPFELDKFQLDAIASLNAGRSVVVCAPTGSGKTLVGEYGIYRALARGKRVFYTTPLK 72

Query: 130 ALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LK 181
           ALSNQK R+  ++F    VGL+TGD +++ +A  +VMTTEI R MLY G+ +      L 
Sbjct: 73  ALSNQKLRDFREQFGFDAVGLLTGDASINRDAPIVVMTTEIFRNMLY-GTPIGQVGISLT 131

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           +V  V+ DE HYM DR+RG VWEESII+ P  I+++ LSAT++N+ Q  +W+  +H  P 
Sbjct: 132 DVEAVVLDECHYMNDRQRGTVWEESIIYCPREIQLIALSATVANSEQLTDWLNQVHG-PT 190

Query: 242 HVVYTDFRPTPLQHY------VFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR 295
            ++Y+DFRP PL+ +      VFP       L+ D+K Q        +    LK+     
Sbjct: 191 DLIYSDFRPVPLEFHFGNLKGVFP-------LLNDDKTQ--------INPRLLKRGRKKE 235

Query: 296 RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN 355
            E GK + R            I  I+  + ER   P I F FSRR C++    +  +   
Sbjct: 236 LEKGKGNRR-------PEAPSINFILSHLQERDMLPAIYFIFSRRGCDKAVAEVGDMWLV 288

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
            ++E   + +     +    E  R+       +  L RGIA HH+G+LPV K LVE LFQ
Sbjct: 289 NEQEAQQLRRQIDEFLTRNPEAGRSG-----HIAPLYRGIAAHHAGILPVWKVLVEELFQ 343

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
           +GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D  
Sbjct: 344 QGLIKVVFATETLAAGINMPARTTVISTISKRTDTGHRMLTASEFLQMAGRAGRRGMDKV 403

Query: 476 GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           G  + +            + + KP PLVS F  SY  +LNL+ +      A  +I+ SF 
Sbjct: 404 GHVVTLQTPFEGAEHAAALAIKKPDPLVSHFTPSYGMVLNLL-QIHTLDEARELIERSFG 462

Query: 536 QFQYEKALPD----IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
           Q+     L      I +  ++LE+    +    E+E+A Y KL+  + ++E+KL++ +  
Sbjct: 463 QYLANVHLQPRQQYIAQLQAELEQIKTQIATVEESEIASYEKLRQRL-KVEQKLLNTLQE 521

Query: 592 P---------ERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRG 637
                       +L +  SG L+ ++         +   ++ K + G    P      R 
Sbjct: 522 QADEGRQDELTMMLSFAVSGTLLCLKGKYLTMSLPITAVLIGK-TQGASQTPYLVCLGRD 580

Query: 638 GGYIVPVQLPLISTLSKI-RLSVPPDLRP-----LDARQSILLAVQEL--ESRFPQGLPK 689
             + V     +++  +++ R+ VPPDL P     L   QS     + +   S+ P+    
Sbjct: 581 NRWYVATTADVVNLYAELPRIDVPPDLLPPAQMSLKPGQSCRGDEESMAIASQIPE---- 636

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK---AEVNHEIQQ 746
             P + + +  PEV + +  I  L  ++ AHPL+++ +   I  F+RK   AE+  EIQ+
Sbjct: 637 --PEESLHM-PPEVAEQLRVIAALREQIEAHPLHQTGNVGTI--FKRKLRAAELEAEIQE 691

Query: 747 LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
           L++++ + Q Q+  +E  N   +L+    +D     QL G+ A  I   +EL +   + +
Sbjct: 692 LQAQV-EQQSQRHWEEFLNLIEILQYFECLDNLLPTQL-GQIAAAIRGENELWLGLALAS 749

Query: 807 GTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
           G  ++LD H +AA A+  +   P   S  + +L  ++A+ L +L+   RK+ ++Q    +
Sbjct: 750 GELDNLDPHCLAAAAAALVTETPRPDSKVRFDLSDQVAEALAKLRGIRRKMFQLQRRYNV 809

Query: 864 EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            + +    E      L+ ++  W+ G  + E+   T + EG ++R  RR  + L+Q+
Sbjct: 810 ALPIWLEFE------LIALVEQWALGMDWVELCDNTTLDEGDVVRILRRTLDLLSQI 860


>gi|336117414|ref|YP_004572182.1| ATP-dependent helicase [Microlunatus phosphovorus NM-1]
 gi|334685194|dbj|BAK34779.1| putative ATP-dependent helicase [Microlunatus phosphovorus NM-1]
          Length = 949

 Score =  360 bits (924), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 285/946 (30%), Positives = 451/946 (47%), Gaps = 94/946 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A  Y F  D +QR + A LE    VLV+A T AGKT V E+A+ +A +  ++  YT+P+
Sbjct: 25  FADGYGFGFDDYQREACAHLESGSGVLVAAPTGAGKTIVGEFAVWLALQRGRKAFYTTPI 84

Query: 129 KALSNQKYREL--HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L      ++VGL+TGD T++  A  +VMTTE+LR M+Y GS  L  + +V
Sbjct: 85  KALSNQKYADLVRRHGAENVGLLTGDSTINSEAPVVVMTTEVLRNMIYAGSSTLDNLGFV 144

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE II L  +I++V LSAT+SNA +F +W+  +  +   VV +
Sbjct: 145 VMDEVHYLADRFRGAVWEEVIIGLAASIQLVALSATVSNAEEFGDWLSEVRGE-MAVVVS 203

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQ---FREDNFVKLQDTFLK----QKIGGRRENG 299
           + RP PL  +V  VG     L  DE          +  ++    +K    +    R ++ 
Sbjct: 204 ERRPVPLFQHVL-VGKRLYDLFADEAPTAVALPSQSTAEVNPALVKVSKEEARHVRDDSR 262

Query: 300 KASGRMAKG------GSGSGGSDIFK--------------------IVKMIMERKFQPVI 333
           +  GR  KG      GSG  G    +                    +V  +      P I
Sbjct: 263 RPRGRSGKGKRAVAYGSGKYGGAAHRSHTDARSGRPRSLAVASRPDLVTALDAEGLLPAI 322

Query: 334 VFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
           VF FSR+ C+     +  S +     EE+  + ++    V  L   D         +  L
Sbjct: 323 VFIFSRQGCDAAVGQLLASGIRLTNAEERAELAEIADRHVAGLTAADLRALDYSRFMEAL 382

Query: 392 KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
           +RG+A HH+G+LP  KE VE  F +GLVKA+FATET A+G+NMPA++VV   + K++G++
Sbjct: 383 QRGVAAHHAGMLPAFKEAVEEAFVKGLVKAVFATETLALGINMPARSVVLEKLVKYNGET 442

Query: 452 HRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYY 511
           H  I  GEY Q++GRAGRRG D  G  +++    ++   +  +   +  PL S+F  +Y 
Sbjct: 443 HADITPGEYTQLTGRAGRRGIDVEGHAVVVWQPGLDPRAVAGLASRRTYPLKSSFAPTYN 502

Query: 512 SILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG---EAEV 568
             +NL+  A G+  A  +++ SF QFQ ++++  + + + +  E  A L A       + 
Sbjct: 503 MAVNLVG-AVGRERARSLLEQSFAQFQTDRSVVGLARSLVRNNEAIAELWAKATCDRGDA 561

Query: 569 AEYHKLKLDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVV 623
            EY +L+ +I+ +E +   E +   R      L  L  G +I+V   G + GW VV++  
Sbjct: 562 QEYARLRAEISAVEAEASRERSADRRAEATQTLLSLMPGDIIRV-PSGKNQGWAVVID-- 618

Query: 624 KKPSAGVGTLPSRGGGYIVPVQLPL-----ISTLSKIRLSVPPDLRPLDARQSIL--LAV 676
             P        +R G    P  L L     I  LS++   VPP   P+  R  I      
Sbjct: 619 --PD-------TRSGDRDNPRPLVLTEDRHIRRLSQVDFPVPP---PVAGRMRIPKHFNP 666

Query: 677 QELESRFPQGLPKLNPVKDMKIEDPE-------VVDLVNQIEELEHKLFAHPLNKSQD-E 728
           +E  SR   G    + +  + + DP+         ++  Q++EL  +L  HP +   D E
Sbjct: 667 KEPASRRNLGAAFRSKLAQVDL-DPQRYRPARVSAEVAEQLDELRDRLRRHPCHTCPDRE 725

Query: 729 NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV--VQLKG 786
              R  +R   +  E ++ + ++  S+     ++      VL  LG++  +    V  +G
Sbjct: 726 THARYAERALRLERENERAQQRV-SSRTNTIANQFDKICTVLGSLGYLGGETSDEVTAEG 784

Query: 787 RAACLIDTGDELLVTELMFNGTFNDLDHHQ-VAALASCFIPVDKSSEQI-NLRMELAKPL 844
           R    I    +L+  E +  G F+DL   Q VA LAS      +S +     RM    P 
Sbjct: 785 RMLARIYAELDLVAAECIRAGVFDDLTPAQLVAVLASLVYESRRSDDHWRKPRM----PD 840

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIF 902
              + +   +  I  E  L V  D  +     P +      Y W+ G   A+V+    + 
Sbjct: 841 LVTENAMTTVRRIWREVSL-VERDNRLSRGPEPDIGFSQSAYGWASGRPLADVLADGHLT 899

Query: 903 EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            G  +R  R++ +F  Q+   A A G   L +   AA  ++RRG++
Sbjct: 900 AGDFVRWVRQVLDFAGQV---ADAAGPGPLRETAHAAVRAMRRGVV 942


>gi|209524293|ref|ZP_03272843.1| DSH domain protein [Arthrospira maxima CS-328]
 gi|376003489|ref|ZP_09781299.1| putative helicase [Arthrospira sp. PCC 8005]
 gi|423066797|ref|ZP_17055587.1| DSH domain protein [Arthrospira platensis C1]
 gi|209495384|gb|EDZ95689.1| DSH domain protein [Arthrospira maxima CS-328]
 gi|375328146|emb|CCE17052.1| putative helicase [Arthrospira sp. PCC 8005]
 gi|406711822|gb|EKD07021.1| DSH domain protein [Arthrospira platensis C1]
          Length = 904

 Score =  360 bits (923), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 274/913 (30%), Positives = 462/913 (50%), Gaps = 92/913 (10%)

Query: 60  FANPVYNG---EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF 116
            +NP+ N    +++  + FELD FQ+ ++A L+  +SV+V A T AGKT + EY+I  A 
Sbjct: 1   MSNPIQNSPKLDLSDLFPFELDDFQKEAIAALDEGKSVVVCAPTGAGKTLIGEYSIHRAL 60

Query: 117 RDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLY 174
            + +RV YT+PLKALSNQK R+  ++F D  VGL+TGD++   +A  LVMTTEI R MLY
Sbjct: 61  ANGRRVFYTTPLKALSNQKLRDFREQFGDEMVGLLTGDISFHRDAPILVMTTEIFRNMLY 120

Query: 175 RGSEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQ 228
            G+ +      L+ V  V+ DE HYM DR+RG VWEESII+ P  I+++ LSAT+ N  Q
Sbjct: 121 -GTPIGQVGTSLEGVEAVVLDECHYMNDRQRGTVWEESIIYCPRNIQLLALSATVDNQQQ 179

Query: 229 FAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL 288
             +WI  +H  P  ++ +D RP P++ Y       G++ ++D  ++    +  K      
Sbjct: 180 LTDWIRRVHG-PTELISSDSRPVPVEFYF--CNSKGMFPLLDGSKRRISPSLAK------ 230

Query: 289 KQKIGGRRENGKASGRMAKGGSGSGGS---DIFKIVKMIMERKFQPVIVFSFSRRECEQH 345
                        S R  + GS +  S   ++  IV  + +R   P I F FSRR C++ 
Sbjct: 231 -------------SSRARQRGSYNRKSTVPELADIVSRLQQRDMLPAIYFIFSRRGCDRA 277

Query: 346 AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
              +S L    ++E      + ++ +D   ++       + + PL K GIA HH+GLLP 
Sbjct: 278 VGDVSHLSLVNRKEA----AILRDRIDRFIKDTPGAARPKQLEPLAK-GIASHHAGLLPA 332

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
            K  VE LFQEGL+K +FATET A G+NMPA+T V +++ K   D HR + + E++QMSG
Sbjct: 333 WKMFVEELFQEGLIKVVFATETLAAGINMPARTTVISSLSKRTDDGHRLLRASEFLQMSG 392

Query: 466 RAGRRGKDDRGICIIMVDEQME-MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF 524
           RAGRRG D  G  ++ V+   E       +   KP PLVS F  SY  +LNL+ +     
Sbjct: 393 RAGRRGMDTIG-HVVTVETPFEGAQEAAYLATSKPNPLVSQFSPSYGMVLNLL-QTHSLE 450

Query: 525 TAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA-----------SGEAEVAEYHK 573
            A++++++SF Q+     L    + +  LE + A ++A           + E  +A+Y K
Sbjct: 451 EAKNLVESSFGQYTSTIHLVPAEQYIKNLEAKLAEVEAELGLGEDLDINTLEETLADYEK 510

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT---------------DWGWGV 618
            +  + Q EK+L+  + +  R  +       + + E GT               D     
Sbjct: 511 QQQRLKQ-EKRLLKTLQKQAREAHTQKMAEALDLAEVGTLVSLRGKHVPTARKSDSEPIS 569

Query: 619 VVNVVKKPSAGVG---TLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLA 675
            V V + PS G      +  R   + +   + ++S  +++     P L   D  +   + 
Sbjct: 570 AVLVAQTPSPGQAPYFIVLGRDNRWYIVGAMDVVSLQAEL-----PRLTWADHLEMPEMQ 624

Query: 676 VQELESRFPQGLPKLNPVK--DMKIED--PEVVDLVNQIEELEHKLFAHPLNK-SQDENQ 730
            +  +SR    + +   V+  ++ +ED  PEV + + +IE++E  L  HP  K  + +  
Sbjct: 625 FKLGQSRRGDEITEALAVQIPELLVEDTAPEVANQITRIEQVEEILATHPAEKFGKPQKI 684

Query: 731 IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
           ++  +R+  +  EI   + ++R    + +R E  N   +L++   +D     +L G+A  
Sbjct: 685 LKRLRRRKAIQKEIVDYQEELRQYLERNWR-EFLNLIDILQEFEALDDLQPTKL-GQATA 742

Query: 791 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIP-VDKSSEQINLRME--LAKPLQQL 847
            +   +EL +  ++ +G F++L+ + +A   S  +  V +S    + ++   + + L +L
Sbjct: 743 ALRGDNELWLGLVLMSGEFDNLEPYNLAGACSALVTEVSRSDSWTHYQLSEVVQETLNRL 802

Query: 848 QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
               R + ++Q    +E  V    E      L  ++  W+ G  +AE+++ T + EG I+
Sbjct: 803 WSLRRSLIKVQGRHHVEFLV--LPERREHQRLSAILEQWAGGVEWAELVKNTTLDEGDIV 860

Query: 908 RSARRLDEFLNQL 920
           R  RR  +FL+Q+
Sbjct: 861 RIIRRTRDFLSQI 873


>gi|427707494|ref|YP_007049871.1| DSH domain-containing protein [Nostoc sp. PCC 7107]
 gi|427359999|gb|AFY42721.1| DSH domain protein [Nostoc sp. PCC 7107]
          Length = 890

 Score =  359 bits (921), Expect = 5e-96,   Method: Compositional matrix adjust.
 Identities = 279/890 (31%), Positives = 458/890 (51%), Gaps = 80/890 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           +   + F+LD FQ+ ++A L    SV+V A T +GKT V EYAI  A   ++RV YT+PL
Sbjct: 12  LGSIFPFDLDQFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALARRKRVFYTTPL 71

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------L 180
           KALSNQK R+  ++F    VGL+TGD +++ +A  LVMTTEI R MLY G+ +      L
Sbjct: 72  KALSNQKLRDFREKFGADLVGLLTGDASINRDAPILVMTTEIFRNMLY-GTPIGQVGISL 130

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
            +V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  +W+ H+H  P
Sbjct: 131 VDVEAVVLDECHYMNDRQRGTVWEESIIYCPREVQLVALSATVANSEQLTDWLNHVHG-P 189

Query: 241 CHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
             ++Y+DFRP PL+ ++  P    GL+ +++E +        K+    +K+   G+ + G
Sbjct: 190 TDLIYSDFRPVPLEFNFCNP---KGLFPLLNESKN-------KINPRLVKKHRKGQGDRG 239

Query: 300 KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF-NTQE 358
           K +GR    G       I   +  + +R   P I F FSRR C++    +  L   N QE
Sbjct: 240 K-NGRPEAPG-------IIYTLSQLQQRDMLPAIYFIFSRRGCDKAVAEVGDLWLVNGQE 291

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIEL-MLPLLKRGIAVHHSGLLPVIKELVELLFQEG 417
            +   EQ+     D LN   RN  A     +  L RG+A HH+G+LP  K LVE LFQ+G
Sbjct: 292 SQILREQI----DDFLN---RNPEAGRSGQIAPLYRGVAAHHAGILPAWKVLVEELFQQG 344

Query: 418 LVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGI 477
           L+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D +G 
Sbjct: 345 LIKVVFATETLAAGINMPARTTVISTLSKRTDTGHRLLNASEFLQMAGRAGRRGMDKQGY 404

Query: 478 CIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
            + +            +   K  PLVS F  SY  +LNL+     +  A  +++ SF Q+
Sbjct: 405 VVTVQTPFEGSKEAAYLATSKADPLVSQFTPSYGMVLNLLQTHTIE-QARELVERSFGQY 463

Query: 538 ----QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEIT--- 590
                 +    +I +   +L +    + A  E+E+A Y KL+  + ++E++L+  +    
Sbjct: 464 IANLHLKPEYDEIAELQEQLAQLQEQIAAVDESEIAVYEKLRQRL-KVERQLLKTLQQQA 522

Query: 591 ---RPERVLYYLG---SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGG 639
              R E ++  LG   SG L+ ++         +   +V K S G+   P      +   
Sbjct: 523 QDDRQEELVMMLGFAVSGTLLSLKGKNITVSTPITAVLVGK-SPGLAQTPYFVCLGQDNR 581

Query: 640 YIVPVQLPLISTLSKI-RLSVPPDLRP---LDARQSILLAVQELESRFPQGLPKLNPVKD 695
           + V     +++  +++ RL VP D+ P   L  +        E  +   Q +P+  P + 
Sbjct: 582 WYVATTEDVMNLHAEMPRLDVPADMLPPPELLFKPGQSYRGNEQTAAIAQSIPE--PGEP 639

Query: 696 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVN--HEIQQLKSKMRD 753
             +  PEV + ++++  +E ++  HPL +S + + I  F+R+A         +   +  +
Sbjct: 640 FHL-SPEVAEQLSRVTAIEEQIENHPLRQSGNASTI--FKRRARYVELEAELEQLQEQVE 696

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
            Q Q+  +E  N   +L++ G +D     +L GR A  I   +EL +  +  +G  N LD
Sbjct: 697 QQSQRHWEEFLNLITILQQFGCLDNLVPTEL-GRIAAAIRGENELWLGLVFASGQLNQLD 755

Query: 814 HHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
            H +AA  +  +   P   S    +L  E+A+ L +L+   R++ ++Q    + + +   
Sbjct: 756 PHHLAAAIAALVTETPRPDSRVNFDLSQEVAEALAKLRNIRRQMFQLQRRYNVALPIWLE 815

Query: 871 VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            E      L+ ++  W+ G  + E+   T + EG ++R  RR  + L+Q+
Sbjct: 816 FE------LIAIVEKWALGMEWTELCSHTTLDEGDVVRILRRTLDLLSQI 859


>gi|427730604|ref|YP_007076841.1| superfamily II RNA helicase [Nostoc sp. PCC 7524]
 gi|427366523|gb|AFY49244.1| superfamily II RNA helicase [Nostoc sp. PCC 7524]
          Length = 893

 Score =  358 bits (919), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 280/908 (30%), Positives = 454/908 (50%), Gaps = 93/908 (10%)

Query: 59  TFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
            +  P    ++   + F+LD FQ+ ++A L    SV+V A T +GKT V EYAI  A   
Sbjct: 2   NYPAPSKELDLGSIFPFDLDQFQKDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALAR 61

Query: 119 KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
            +RV YT+PLKALSNQK R+  ++F    VGL+TGD +++ +A  LVMTTEI R MLY G
Sbjct: 62  GKRVFYTTPLKALSNQKLRDFREKFGFDLVGLLTGDASINRDAPILVMTTEIFRNMLY-G 120

Query: 177 SEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFA 230
           + +      L +V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  
Sbjct: 121 TPIGQVGISLVDVEAVVLDECHYMNDRQRGTVWEESIIYCPREVQLVALSATVANSDQLT 180

Query: 231 EWICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK 289
           +W+  +H  P  ++Y+DFRP PL+ HY  P    GL+ ++++                 K
Sbjct: 181 DWLNRVHG-PTDLIYSDFRPVPLEFHYCNP---KGLFPLLNDS----------------K 220

Query: 290 QKIGGRRENGKASGRMAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQH 345
            KI  R  N    G+  +G  G  G      +   +  + +R   P I F FSRR C++ 
Sbjct: 221 TKISPRLAN---RGKRKQGDRGRNGRPEAPSLIYTLNHLQQRDMLPAIYFIFSRRGCDKA 277

Query: 346 AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
              +  L     +E     QV +  +D     +        + PL  RGIA HH+G+LP 
Sbjct: 278 VAEVGDLWLVDNDES----QVLRRQIDDFLSRNPEAGRSGQIAPLY-RGIAAHHAGILPA 332

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
            K LVE LFQ+GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+G
Sbjct: 333 WKLLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDTGHRLLNASEFLQMAG 392

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  + +            +   KP PLVS F  SY  +LNL+     + T
Sbjct: 393 RAGRRGMDKQGHVVTVQTPFEGAKEAAYLATSKPDPLVSQFTPSYGMVLNLLQTHTLEET 452

Query: 526 AEHVIKNSFHQFQYEKAL-PD------IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDI 578
            E +I+ SF Q+     L PD      +  ++++++E+ AS+    E E+A Y KL+  +
Sbjct: 453 RE-LIERSFGQYMATLHLRPDYELIDELKAQLAEIDEQIASV---SEHELAIYEKLRQRL 508

Query: 579 A---QLEKKLMSEI--TRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVV---KKPS 627
               QL K L  +    R E++   L +   G L+ ++  G +    V +  V   + P+
Sbjct: 509 KAERQLLKTLQEQAQEARQEQIKMLLDFAVCGTLLSLK--GKNIAVSVPITAVLVGQSPT 566

Query: 628 AGVGT----LPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQE----- 678
           AG  +    L      Y+   +  +       R+ VP D+ P   ++ I    Q      
Sbjct: 567 AGQSSYLVCLGQDNRWYVAATEDVVDLYAELPRVEVPQDILP--PQELIFKPGQSCRGNA 624

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA 738
           +     Q +P+  P + + +  PEV + ++++  ++ +L A+PL +S +  +I   + + 
Sbjct: 625 ITDAIAQNIPE--PDESLHLP-PEVAEQLHRVTAVQAQLEANPLYQSGNVAKIFKRRERY 681

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
               E  Q      + Q Q+  +E  N   +L++   +D     QL G+ A  I   +EL
Sbjct: 682 AEIQEELQELEAQVEQQSQRHWEEFLNLITILQQFDCLDNLVPTQL-GQVAAAIRGENEL 740

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +   + +G  N+LD   +AA+ +  +   P   S    NL  E+ +   +LQ+  R + 
Sbjct: 741 WLGLALASGELNNLDPQHLAAVIAALVTETPRPDSRVNFNLSPEIDEAWSRLQKIRRAVL 800

Query: 856 EIQNECKLEVNV---DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
           ++Q    + + V   + Y+       L+ ++  W+ G  + E+ + T + EG ++R  RR
Sbjct: 801 KVQYRHGVALPVGLENRYIG------LIAIVEQWALGTEWVELCENTTLDEGDVVRILRR 854

Query: 913 LDEFLNQL 920
             + L+Q+
Sbjct: 855 TLDLLSQI 862


>gi|434403322|ref|YP_007146207.1| superfamily II RNA helicase [Cylindrospermum stagnale PCC 7417]
 gi|428257577|gb|AFZ23527.1| superfamily II RNA helicase [Cylindrospermum stagnale PCC 7417]
          Length = 892

 Score =  358 bits (919), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 273/893 (30%), Positives = 455/893 (50%), Gaps = 90/893 (10%)

Query: 59  TFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
            +  P    ++   + FELD FQ+ ++A L    SV+V A T +GKT V EYAI  A   
Sbjct: 2   NYPAPSPELDLGSVFPFELDQFQQDAIASLNAGRSVVVCAPTGSGKTLVGEYAIYRALSR 61

Query: 119 KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
            +RV YT+PLKALSNQK R+  ++F    VGL+TGD +++  A  LVMTTEI R MLY G
Sbjct: 62  GKRVFYTTPLKALSNQKLRDFREKFGSDQVGLLTGDASINREAPILVMTTEIFRNMLY-G 120

Query: 177 SEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFA 230
           + +      L +V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  
Sbjct: 121 TPIGQVGISLVDVEAVVLDECHYMNDRQRGTVWEESIIYCPREVQLVALSATVANSDQLT 180

Query: 231 EWICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK 289
           +W+  +H  P  ++Y+DFRP PL+ H+  P    GL+ +++E                 K
Sbjct: 181 DWLNRVHG-PTDLIYSDFRPVPLEFHFCNP---KGLFPLLNET----------------K 220

Query: 290 QKIGGRRENGKASGRMAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQH 345
            KI  R    K SG+  K   G  G      I   +  + +R   P I F FSRR C++ 
Sbjct: 221 TKINARL--SKRSGKKGKFEHGRTGRPEAPGIIYTLSQLEQRDMLPAIYFIFSRRGCDKA 278

Query: 346 AMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
              +  L     +E     Q+ +  +D     +        + PL  RGIA HH+G+LP 
Sbjct: 279 VAEVGDLWLVNNDES----QILRRQIDDFLSRNPEAGRSGQIAPLY-RGIAAHHAGILPA 333

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
            K LVE LFQ+GL+K +FATET A G+NMPA+T V + + K   + HR + + E++QMSG
Sbjct: 334 WKVLVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDNGHRLLKASEFLQMSG 393

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  + +            +   +  PLVS F  SY  +LNL+       T
Sbjct: 394 RAGRRGMDLQGHVVTVQTPFEGAKEAAYLATSEADPLVSQFTPSYGMVLNLLQTHTLDQT 453

Query: 526 AEHVIKNSFHQF--------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLD 577
            E +I+ SF Q+         YE+ + +I  ++++L+E+ A++D   E E+A Y KL+  
Sbjct: 454 RE-LIERSFGQYMATLHLRPDYEE-IAEIQAELTQLQEQIAAVD---EKELAVYEKLRQR 508

Query: 578 IAQLEKKLMSEIT------RPERVLYYLG---SGRLIKVREGGTDWGWGVVVNVVKKPSA 628
           + ++E++++  +       R E+++  L    SG L+ +++        +   +V K   
Sbjct: 509 L-KVERQILRTLQEQAQKDRQEQLVMMLDFAVSGTLLSLKDKNITATLPITAVLVAKSPI 567

Query: 629 GVGTLP-----SRGGGYIVPVQLPLISTLSKI-RLSVPPDLRP---LDARQSILLAVQEL 679
             G  P      R   + V   + ++   +++ R+ VPPD+ P   L  ++   +   E 
Sbjct: 568 AAGQSPYLVCLGRDNRWYVATSVDVVDLYAELPRVEVPPDMLPPSELPLKRGQSIRGNEE 627

Query: 680 ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE 739
            +   Q +P  +P ++     PEV   ++++  ++ +L  HPL+++ +   I  F+R+A 
Sbjct: 628 TAAIAQCIP--DP-EEFLPTSPEVAAQLSRVTAVQEQLETHPLHEAGNAAAI--FKRRAR 682

Query: 740 VNHEIQQLKSKMR--DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
                 +++        Q Q+  +E  +   +L++ G +D + V    G+ A  I   +E
Sbjct: 683 CIELEAEIEELEGRVGQQSQRHWEEFLSLIEILQQFGGLD-NLVPTTLGQIAAAIRGENE 741

Query: 798 LLVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKI 854
           L +  +  +G  ++LD H +AA A+  +   P   S  +  L  E+A+ L +L+   R++
Sbjct: 742 LWIGLVFASGELDNLDPHHLAAAAAALVTETPRPDSKVRYELSNEVAEALAKLRGIRRQM 801

Query: 855 AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
            ++Q    + + +    E      L+ ++  W+ G  + E+ + T + EG ++
Sbjct: 802 FQVQRRYNVALPIWLEFE------LIAIVEQWALGMEWIELCENTTLDEGDVV 848


>gi|284032976|ref|YP_003382907.1| DSH domain-containing protein [Kribbella flavida DSM 17836]
 gi|283812269|gb|ADB34108.1| DSH domain protein [Kribbella flavida DSM 17836]
          Length = 957

 Score =  358 bits (919), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 289/963 (30%), Positives = 459/963 (47%), Gaps = 118/963 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E    Y F+LD FQ  + A LE    VLV+A T +GKT V E+A+ +A +  Q+  YT+P
Sbjct: 22  EFRALYDFDLDEFQLRACAALEDGHQVLVAAPTGSGKTLVGEFAVHLALQRGQKCFYTTP 81

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS  L  +++
Sbjct: 82  IKALSNQKYADLVRRYGQDKVGLLTGDNSINSEAPIVVMTTEVLRNMLYAGSHTLLGLSY 141

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  +      VV 
Sbjct: 142 VVMDEVHYLADRARGAVWEEVIIHLPDSVAVVSLSATVSNAEEFGDWLETVRGNTV-VVL 200

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
            + RP PL  +V  VG     L   E    R        +   K K G    N   SG  
Sbjct: 201 EEKRPVPLFQHVM-VGKRLHDLFAGEAPTARAGAPALYGNPSGKSKSG----NPAKSGNP 255

Query: 306 AKGGS-GSGGSDIFKIVKMIMER------------------------------------- 327
           AK G   S   D+  +V   + R                                     
Sbjct: 256 AKSGPPASAAPDLRDLVNPQLVRIAREDNRIFRDDSRKPRRRRDLPKNRPSKSHFTPYRS 315

Query: 328 ---------KFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNE 376
                       P I F FSR+ CE   +    S L      E+D +++V       L +
Sbjct: 316 DVVEELDAGALLPAIYFIFSRKGCEDAMLQCLRSGLRLTKPSERDEIKRVLAERTADLPD 375

Query: 377 EDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPA 436
           ED  +         L RGIA HH+G+L   KE+VE LF  GL+K +FATET A+G+NMPA
Sbjct: 376 EDLGVLGYHDFAEALSRGIAAHHAGMLAAFKEVVEELFARGLIKVVFATETLALGINMPA 435

Query: 437 KTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVL 496
           +TVV   + KW+G++H  I  GEY Q++GRAGRRG D  G  +++     +   +  +  
Sbjct: 436 RTVVLEKLSKWNGEAHVDITPGEYTQLTGRAGRRGIDVEGHAVVLWQPGFDPRAVAGLAS 495

Query: 497 GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEE 556
            +  PL S+F  SY   +NL+ R  G+  A  +++ SF QFQ ++A+  + ++V +  E 
Sbjct: 496 TRTYPLRSSFSPSYNMAVNLV-RQVGRGRARDMLELSFAQFQSDQAVVGLARQVQRNTEA 554

Query: 557 AASLDASGEAEVAE---YHKLKLDIAQLE-----KKLMSEITRPERVLYYLGSGRLIKVR 608
                 S +  + +   Y  L+  I + E     ++ +      +  +  L  G +I++ 
Sbjct: 555 LEGYKESIDCHLGDFLSYADLRRRIGERESSGSKRRKLDRRAEAQESIEKLRIGDIIRI- 613

Query: 609 EGGTDWGWGVVVNVVKK-----PSAGVGTLPSRGGGYIVPVQLPL-ISTLSKIRLSVPPD 662
             G   GW +V++   +     P   V TL  R    +  +  P  +  +  +R  VP  
Sbjct: 614 PAGRSAGWALVLDPGMRSEREGPRPTVLTL-DRQVRKLSMIDFPAPVEAIGSLR--VPKK 670

Query: 663 LRPLDARQSILLAVQELESRFP----QGLPKLNPVKDM--KIEDPEVVDLVNQIEELEHK 716
               + +Q   LA Q L +R       G P  +  +D+    +DPE       ++E+  +
Sbjct: 671 FNARNPQQRRDLA-QVLRNRTDMLGEDGPPSRSKGRDVITHADDPE-------LQEMRAQ 722

Query: 717 LFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKL 773
           L AHP +   D E+  R  +R   ++ E ++++ K+  R + I +  D +    +VL  L
Sbjct: 723 LRAHPCHGCADREDHARWAERYFRLDRETREVQRKIEQRTNTIARQFDRV---CQVLDAL 779

Query: 774 GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS-SE 832
            ++D D   +   R A  I T  +L+  E +  G F+DLD  Q+AA  +  +   +S  E
Sbjct: 780 HYLDGDKTTEAGDRLA-RIYTELDLVAAECLRQGVFDDLDVPQLAACLAALVYESRSKDE 838

Query: 833 QINLRMELAKPLQQLQESARKIAEIQNE-CKLEVNVD-EYVESTVRPFLMDVIYC----- 885
             + R+    P   ++ +  ++  I  +   LE N+  +++ S      MD+ +C     
Sbjct: 839 PTSPRL----PQGDVRHALERMGSIWRDLSALERNMRVDFLRS------MDLGFCWAAFR 888

Query: 886 WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRR 945
           W+ GA+ +EV+  +D+  G  +R  ++L +   Q+   A A G   L     A +E +RR
Sbjct: 889 WASGASLSEVLYESDLAAGDFVRWVKQLIDLTEQV---ADAAGPTPLRATARAVTEEIRR 945

Query: 946 GIM 948
           G++
Sbjct: 946 GVI 948


>gi|414075935|ref|YP_006995253.1| DNA/RNA helicase [Anabaena sp. 90]
 gi|413969351|gb|AFW93440.1| DNA/RNA helicase [Anabaena sp. 90]
          Length = 893

 Score =  357 bits (917), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 275/907 (30%), Positives = 458/907 (50%), Gaps = 90/907 (9%)

Query: 57  HGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF 116
           +  FAN +   ++   + FELD FQ+ ++A L  + SV+V A T +GKT + EYAI  A 
Sbjct: 3   YSAFANEI---DLGSIFPFELDQFQKEAIASLNADRSVVVCAPTGSGKTLIGEYAIYRAL 59

Query: 117 RDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLY 174
              +RV YT+PLKALSNQK R+  ++F    VGL+TGD ++  +A  LVMTTEI R MLY
Sbjct: 60  SRGKRVFYTTPLKALSNQKLRDFREKFGFDQVGLLTGDASIHRDAPILVMTTEIFRNMLY 119

Query: 175 RGSEV------LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQ 228
            G+ +      L +V  V+ DE HYM DR+RG VWEESII+ P ++++V LSAT++N+ Q
Sbjct: 120 -GTPIGQIGISLADVEAVVLDECHYMNDRQRGTVWEESIIYCPRSVQLVALSATVANSDQ 178

Query: 229 FAEWICHLHKQPCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTF 287
              W+ H+H     ++Y+DFRP PL+ ++  P    GL+ +++E          K+    
Sbjct: 179 LTSWLNHVHGH-TDLIYSDFRPVPLEFNFCNP---KGLFPLLNETN-------TKINPRL 227

Query: 288 LKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
           +K+   G  E GKA GR    G       I   +  + ER   P I F FSRR C++   
Sbjct: 228 VKKAKKGYWEKGKA-GRPEPPG-------IIYTLSQLQERDMLPAIYFIFSRRGCDKAVE 279

Query: 348 SMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
            +  L     +E     Q+ +  +D    ++ +      + PL  RGIA HH+G+LP  K
Sbjct: 280 EVGDLWLVNNDES----QILRQQIDEFLRKNPDAGRAGQVAPLY-RGIAAHHAGILPAWK 334

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
             VE LFQ+GL+K +FATET A G+NMPA+T V + + K   + HR + + E++QM+GRA
Sbjct: 335 GFVEELFQQGLIKVVFATETLAAGINMPARTTVISTLSKRTDNGHRLLNASEFLQMAGRA 394

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D +G  + +            +   K  PLVS F  SY  +LNL+     +  A 
Sbjct: 395 GRRGMDLQGYVVTLQTPFEGAKEASYLATSKADPLVSQFTPSYGMVLNLLQTHTIE-KAR 453

Query: 528 HVIKNSFHQFQYEKAL-PD------IGKKVSKLEEEAASLDASGEAEVAEYHKL--KLDI 578
            +I+ SF Q+     L PD      +  ++S+++ + A++D   E E+ +Y KL  +L +
Sbjct: 454 ELIERSFGQYMSNLHLQPDFEELAQVQGELSQIQSQLAAID---ENELMQYEKLRQRLKV 510

Query: 579 AQLEKKLMSEITRPER------VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
            +   K + E  + +R      +L +  SG ++ + +        + V +V K +  VG 
Sbjct: 511 ERQIFKTLQEQAQEDRQAQLAMMLDFAISGTMLSLNDRNAMSPLPITVVLVDK-AVSVGE 569

Query: 633 LP-----SRGGGYIVPVQLPLISTLSKI-RLSVPPDLRP---LDARQSILLAVQELESRF 683
                   +   + V     ++   ++I R+ VP  L P   L  ++   +   E     
Sbjct: 570 TSYFVCLGQNNRWYVATSADILDMYAEIPRVEVPAQLIPPSELSLKRGQSIRGDESTIAI 629

Query: 684 PQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-----ENQIRCFQRKA 738
            Q +P  NP ++      EV + ++++  ++ +L  HP+ KS +     +N+ RC + +A
Sbjct: 630 AQSIP--NP-EEFNHLPTEVQEQLSRLTAVQEQLETHPIYKSGNIAKIFKNRARCVELEA 686

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
           E+ H  +Q+       Q Q++ +E      +L+    +D     +L G+ A  I   +EL
Sbjct: 687 ELEHLQEQVS-----LQSQRYWEEFLCLIEILQSFECLDNLVPTKL-GQIAAAIRGENEL 740

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +  ++ +G  +++  H +AA+ +  +   P   +    NL  E       LQ   R + 
Sbjct: 741 WLGLVLSSGELDNIGPHNLAAVIAALVTESPRPDTKVDFNLSPEADAAWLTLQPIRRSVL 800

Query: 856 EIQ--NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
           ++Q  +   L V ++    S     L+ ++  W+ G  +  + + T + EG ++R  RR 
Sbjct: 801 KVQYRHGVALPVGLETRFIS-----LISLVEQWALGVEWKVLCEKTTLDEGDVVRILRRT 855

Query: 914 DEFLNQL 920
            + L+Q+
Sbjct: 856 LDLLSQI 862


>gi|221054466|ref|XP_002258372.1| helicase with zn-finger motif [Plasmodium knowlesi strain H]
 gi|193808441|emb|CAQ39144.1| helicase with zn-finger motif, putative [Plasmodium knowlesi strain
           H]
          Length = 1378

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 199/527 (37%), Positives = 298/527 (56%), Gaps = 63/527 (11%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            ++  +Y FELD FQ+ S+  L   + V V+AHTSAGKT +AE+AIAM+ +  ++ IYTS
Sbjct: 313 NDLLLSYDFELDDFQKRSIKHLNNFKHVFVAAHTSAGKTLIAEHAIAMSIKLNKKAIYTS 372

Query: 127 PLKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           P+KALSNQKY E    FK VG++TGD+ ++ NA+CL+MTTEILR +LY    ++  +  V
Sbjct: 373 PIKALSNQKYHEFKNIFKSVGIITGDIKMNVNANCLIMTTEILRNLLYINDNIINNIHCV 432

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           IFDE+HY+ D ERG +WEESII LPP ++++ LSAT+ N  +FA+W+    K+    + T
Sbjct: 433 IFDEVHYVNDNERGFIWEESIIMLPPHVQILLLSATVPNYLEFADWVGFTKKKEIVSIST 492

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGG------------ 294
             RP PL HY++      ++ ++DE  +     F ++     +++               
Sbjct: 493 KKRPVPLLHYIY--AYDSIFQIMDENNKIYSSAFKEIYTKVREKEQASGGHGGHHGGHHG 550

Query: 295 --------RRENGKASGRMAKGGSGSGG-------------------------------- 314
                   +  + K SG   K    SGG                                
Sbjct: 551 GHHGGQSKQAPSAKWSGHDGKNKQPSGGGPGSTPTNNNPPIAYNEYCKQKRRQKLFANEA 610

Query: 315 ---SDIFK---IVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQ 368
              ++I K   ++K + +    PV++F FSR +CE +A SM  L+F   + K  V    +
Sbjct: 611 NMKTEIQKLQALIKKLEQDNKLPVVLFCFSRIKCETYAKSMPHLNFLDNKHKSKVHLFIK 670

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            ++  L  +DR L  I+++  LL++GI +HHSGLLP++KE+VE+LF +GL+K LFATETF
Sbjct: 671 ESIAKLCTQDRELNQIKILSKLLEKGIGIHHSGLLPILKEIVEILFSKGLIKILFATETF 730

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-E 487
           AMG+NMPAK+VVFT++ K D    R + S EY QMSGRAGRR  D  G   I   +++ +
Sbjct: 731 AMGINMPAKSVVFTSIYKHDQLKKRILTSSEYTQMSGRAGRRSSDKYGYVYIYCPDKIPD 790

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
              L +M++ K   L S F+++Y  IL L+     Q   E ++ +SF
Sbjct: 791 QVQLTEMLMQKAVSLKSKFKVTYNMILKLL--INKQINIEKMLFSSF 835



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 166/330 (50%), Gaps = 23/330 (6%)

Query: 640  YIVPVQLPL--ISTLSKIRLSVPPDLRP---LDARQSILLAVQELESRFPQG------LP 688
            ++V   +PL  IS ++   + V P+++    L+   ++LL   EL+    +G      L 
Sbjct: 1057 FVVCSNVPLDHISIITNTVI-VLPNVKTTAILNNPSNMLLYSLELDRLIEKGNFEPFVLT 1115

Query: 689  KLNPVKDMKIEDPEVVDLVNQIEELE--HKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQ 746
            K+  +K +K E   V  L+ Q + LE   K   +  N  +   +I C +R   +N +I+ 
Sbjct: 1116 KM--LKSLKCEFYSV--LIKQADYLEALKKSQCYSCNMKEKHYEIVC-KRNKCIN-DIEN 1169

Query: 747  LKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            ++  +    +  + D L+ R  VL+    ID D  + +KG+ A  I   DE+ +T+++F 
Sbjct: 1170 IEQNINAKSLNLYED-LEGRLDVLRHFSFIDEDHNLTVKGKIASYITMTDEITLTQVIFE 1228

Query: 807  GTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
               N+L+  ++AA+ SCF+ P  K  E  +L + L      L     +  E     +L++
Sbjct: 1229 NVLNNLNPPEIAAVLSCFVAPEKKIEESPDLTVNLQDVKMALTNIHSQFEEFYKIIRLKI 1288

Query: 866  NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
            + +++ +      +M + Y W+ G +FAE+++  ++ EG I+RS  RLD+   +++ A  
Sbjct: 1289 SSEDHWKLCSFK-IMFIAYKWALGVSFAELLEQCELEEGLIVRSILRLDDLCRKVKIAFL 1347

Query: 926  AVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
             +G V+L ++       LRR I+F  SLYL
Sbjct: 1348 YLGNVDLAERLETTCTLLRRDIIFMTSLYL 1377


>gi|156097206|ref|XP_001614636.1| DEAD/DEAH box helicase [Plasmodium vivax Sal-1]
 gi|148803510|gb|EDL44909.1| DEAD/DEAH box helicase, putative [Plasmodium vivax]
          Length = 1393

 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 196/522 (37%), Positives = 297/522 (56%), Gaps = 63/522 (12%)

Query: 72  TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKAL 131
           +Y FELD FQ+ S+  L   + V V+AHTSAGKT +AE+AIAM+ +  ++ IYTSP+KAL
Sbjct: 305 SYDFELDDFQKRSIKHLNNFKHVFVAAHTSAGKTLIAEHAIAMSIKLNKKAIYTSPIKAL 364

Query: 132 SNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           SNQKY E    FK VG++TGD+ ++ +A+C++MTTEILR +LY    ++  +  VIFDE+
Sbjct: 365 SNQKYHEFKNLFKSVGIITGDIKMNVHANCIIMTTEILRNLLYINDNIINNIHCVIFDEV 424

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ D +RG +WEESII LPP ++++ LSAT+ N  +FA+W+    K+    + T  RP 
Sbjct: 425 HYVNDNDRGFIWEESIIMLPPHVQILLLSATVPNYLEFADWVGFTKKKEIISISTKKRPV 484

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNF----VKLQDT--------------------- 286
           PL HY++      ++ ++DEK +     F    VK+++                      
Sbjct: 485 PLLHYIY--AYDTIFQIMDEKNKIYSSAFKEIYVKVREKEQGGAHGGGGHGSGGHAGHAN 542

Query: 287 ---FLKQKIGGRRENGKASGRMAKGGSGSGGSD--------------------------- 316
                K     +R +     +   GG+G+  ++                           
Sbjct: 543 HGGQAKHAPSAKRNSHDGKNKQPGGGAGAPSNNQPMAYNEYCKQKRRQKLFANEANMKTE 602

Query: 317 ---IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDC 373
              +  ++K + +    PV++F FSR +CE +A SM  L+F   + K  V    + ++  
Sbjct: 603 IQKLQALIKKLEQDNKLPVVLFCFSRIKCETYAKSMPHLNFLDNKHKSKVHLFIKESIAK 662

Query: 374 LNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLN 433
           L  +DR L  I+++  LL++GI +HHSGLLP++KE+VE+LF +GL+K LFATETFAMG+N
Sbjct: 663 LCTQDRELNQIKILTKLLEKGIGIHHSGLLPILKEIVEILFSKGLIKILFATETFAMGIN 722

Query: 434 MPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG-ICIIMVDEQMEMNTLK 492
           MPAK+VVFT++ K D    R + S EY QMSGRAGRR  D  G + I   D+  +   L 
Sbjct: 723 MPAKSVVFTSIYKHDQLKKRILTSSEYTQMSGRAGRRSSDKYGYVYIYCADKIPDQVQLT 782

Query: 493 DMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
           +M++ K   L S F+++Y  IL L+     Q   E ++ +SF
Sbjct: 783 EMLMQKAVSLKSKFKVTYNMILKLL--INKQINIEKMLFSSF 822



 Score = 90.1 bits (222), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 17/299 (5%)

Query: 666  LDARQSILLAVQELESRFPQG------LPKLNPVKDMKIEDPEVVDLVNQIEELE--HKL 717
            L+  +++LL   EL+    +G      L K+  +K +K E   V  L+NQ + LE   K 
Sbjct: 1102 LNNPKNMLLYSLELDRLIEKGNFEPFVLTKM--LKSLKCEFYSV--LINQADYLEALKKS 1157

Query: 718  FAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID 777
              +  N  +   ++ C +R   +N +I+ ++  +    +  + D L+ R  VL+    ID
Sbjct: 1158 KCYSCNMREKHYELVC-KRNNCIN-DIENIERNINAKSLNLYED-LEGRLDVLRHFSFID 1214

Query: 778  ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINL 836
             +  + +KG+ A  I   DE+ +T+++F    N+L+  ++AA+ SCF+ P  K  E  +L
Sbjct: 1215 DEHNLTVKGKIASYITLTDEITLTQVIFENLLNNLNPPEIAAVLSCFVAPEKKIEESPDL 1274

Query: 837  RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
             + L      L     +  E     +L+++ +E+ +      +M + Y W+ G +FAE++
Sbjct: 1275 TVNLQDVKMALTNIHSQFEEFYKIIRLKISSEEHWKLCSFK-IMFIAYKWALGVSFAELL 1333

Query: 897  QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
            + +++ EG I+RS  RLD+   +++ A   +G V+L ++       LRR I+F  SLYL
Sbjct: 1334 EQSELEEGLIVRSILRLDDLCRKVKIAFLYLGNVDLAERLETTCTLLRRDIIFMTSLYL 1392


>gi|260903687|ref|ZP_05912009.1| DEAD/DEAH box helicase domain protein [Brevibacterium linens BL2]
          Length = 907

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 283/916 (30%), Positives = 464/916 (50%), Gaps = 83/916 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G  +    FELD FQ  + A L+  + VLV+A T AGKT +AE+A+ +A  + +RV YT+
Sbjct: 38  GRFSARMEFELDDFQLEACAQLQDGKDVLVTAPTGAGKTLIAEFAVELARDEGKRVFYTT 97

Query: 127 PLKALSNQKYRELH--QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L      ++VGL+TGD ++  +A  +VMTTE+LR MLY     L ++ 
Sbjct: 98  PIKALSNQKFNDLMDVHGVENVGLLTGDTSIRRDAPIIVMTTEVLRNMLYNDVAGLSDLG 157

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP  ++MV LSAT+SN  +F  W+  + + P  VV
Sbjct: 158 FVVLDEVHYLADRFRGPVWEEVIIHLPDRVQMVSLSATVSNVEEFGAWLSEV-RGPTTVV 216

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
            T  RP PL ++V    G  +Y +    +  R D  +   +   +   G R +  +A+  
Sbjct: 217 STSHRPVPLVNHVLV--GHRMYDLFTHHDSDRIDPAL---NHATRTHGGPRSKRERATRA 271

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDT 362
             +  S +      ++V  + E    P I+F FSR  C++       S  D N++EEK  
Sbjct: 272 RFRRPSRT------QVVSSLAEAGMLPAIMFIFSRNACDEAVEQYLSSGFDLNSREEKVI 325

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           V    +   D L  ED  +         L  G+A HH+G++P  K+LVE LF +G++K +
Sbjct: 326 VNAALEKLRDELASEDLGILGFHSFREGLLLGVAAHHAGMIPQFKQLVEELFSQGIIKVV 385

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATET A+G+NMPA+TVV   + K++G++H  I  GEY Q++GRAGRRG D  G  +++ 
Sbjct: 386 FATETLALGINMPARTVVLEKLVKFNGEAHVSITPGEYTQLTGRAGRRGIDQIGHAVVIW 445

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
               E+N +  +   +   L S F  +Y    NL+SR      A+ V++ SF QFQ +KA
Sbjct: 446 HPSFEVNEIAGLASNRSYALNSAFGPTYNMTANLLSRMSSAEAAK-VLETSFAQFQADKA 504

Query: 543 LPDIGKKVSKLEEEAASLDASGEAEV---AEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           +  + KKV K E   A+ + S + ++   AEY +L+  I+  EK    + TR +      
Sbjct: 505 VVGLAKKVRKNEATIAAYEKSMKCDLGDFAEYARLRQAISDTEK----QETRTK------ 554

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAG----VGTLPSRGGGYIVPVQLPLISTLSKI 655
              R  ++ E  T    G VV +  K   G    +  + SR GG  +P  L     +  +
Sbjct: 555 SKNRQREIVESLTALKIGDVVTLPTKRVEGAAVIIAPMSSRDGGSRLPTVLTEQGKVWHL 614

Query: 656 RLSVPPDLR-PLDARQSILLAV-----QELESRFPQGLPKLN-PVKDMKIE-------DP 701
           R   P ++  PL A+  + +       Q  + R  Q L  LN  + + K++        P
Sbjct: 615 R---PHEVTAPLPAQGRVRVPKKFNHRQAGDRR--QLLGILNDAIHEGKVDHEAHWESKP 669

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQK 758
               + + + E+  +L AHP +   D E   R   R A++  E   L +++  R + I  
Sbjct: 670 GSPGVSSSVTEMTAQLRAHPCHDCPDREMHARWANRAAKLVKENDSLIARIEGRTTSIAL 729

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
             + +++   VL+ LG  D +    L+      I    +LLV   +  G +++L   ++A
Sbjct: 730 VFERVQD---VLRTLG-FDPEQSDMLR-----RIYGERDLLVALTIRAGLWDNLVEPELA 780

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESA----RKIAEIQNECKLEVNVDEYVEST 874
           A ASCF+   + ++ ++     ++ L+   + A    RK+ +++ +  L         +T
Sbjct: 781 AFASCFVFQSRRADTLHSERAPSRDLKVNGDEAVTMWRKLFQLEEQHAL--------STT 832

Query: 875 VRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNL 932
             P   L   +Y W++G   A+ ++ TDI  G  +R A++  + L Q+   A+    V +
Sbjct: 833 QEPDRGLFKPMYRWTEGKNLADSLRGTDIAAGDFVRWAKQSLDLLGQVAEVAEPETAVRI 892

Query: 933 EKKFAAASESLRRGIM 948
            +      E++RRG++
Sbjct: 893 RRTI----EAIRRGVV 904


>gi|345321203|ref|XP_003430394.1| PREDICTED: superkiller viralicidic activity 2-like 2-like, partial
           [Ornithorhynchus anatinus]
          Length = 305

 Score =  357 bits (915), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 164/237 (69%), Positives = 192/237 (81%), Gaps = 13/237 (5%)

Query: 38  CVHEVAVPSG--YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           C HEVA+P+   Y   K              G+ AK Y F LD FQR ++ C++ N+SVL
Sbjct: 80  CTHEVALPADEDYVALKPRV-----------GKAAKEYPFILDAFQREAIQCVDNNQSVL 128

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT  AEYAIA+A R+KQRVI+TSP+KALSNQKYRE+++EF+DVGLMTGDVT+
Sbjct: 129 VSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTI 188

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +P ASCLVMTTEILR MLYRGSEV++EVAWVIFDEIHYM+D ERGVVWEE+II LP  + 
Sbjct: 189 NPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGVVWEETIILLPDNVH 248

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK 272
            VFLSAT+ NA QFAEWICHLHKQPCHV+YTD+RPTPLQHY+FP GG GL+LVVDE 
Sbjct: 249 YVFLSATIPNARQFAEWICHLHKQPCHVIYTDYRPTPLQHYIFPAGGDGLHLVVDEN 305


>gi|72162166|ref|YP_289823.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal, partial
           [Thermobifida fusca YX]
 gi|71915898|gb|AAZ55800.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
           [Thermobifida fusca YX]
          Length = 947

 Score =  357 bits (915), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 281/965 (29%), Positives = 468/965 (48%), Gaps = 121/965 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E    Y F+ D FQ  +   LE    VLV+A T +GKT V E+A+ +A RD ++  YT+P
Sbjct: 24  EFQNLYGFDFDDFQIRACKALETGHGVLVAAPTGSGKTVVGEFAVHLALRDGRKCFYTTP 83

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS  L  +A+
Sbjct: 84  IKALSNQKYTDLVRRYGSDKVGLLTGDNSINGEAPVVVMTTEVLRNMLYAGSATLSGLAY 143

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP ++++  LSAT+SNA +F +W+  + +    V+ 
Sbjct: 144 VVMDEVHYLADRFRGAVWEEVIIHLPESVQIAALSATVSNAEEFGQWLQQV-RGDTSVIV 202

Query: 246 TDFRPTPL-QH----------YVFP---------------------------------VG 261
            + RP PL QH          +V P                                 VG
Sbjct: 203 DEKRPVPLWQHMMVGTRIHDLFVEPEGTDTGQEEEKNGRGSRKRRRSRHARQRTVEIEVG 262

Query: 262 GSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIV 321
           G  L+ V  +  +F E++    Q  + +     R    +A G   +  S        +IV
Sbjct: 263 GERLH-VNPKLIRFAEEDARLTQLAYQR-----RHPQARARGGAPRPRSRFAPPTRAQIV 316

Query: 322 KMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
           + +      P I F FSR  C++       S L   T EE   + +  +     +   D 
Sbjct: 317 EQLDREGLLPAITFIFSRAGCDEAVRQCVASGLVLTTPEEAAEIREYAERQCAEIPPADL 376

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
           N+      L  L+ GIA HH+G+LP  KE+VE+LF  GL++A+FATET A+G+NMPA+TV
Sbjct: 377 NVLGYSEWLQALECGIAAHHAGMLPTFKEVVEVLFSRGLIRAVFATETLALGINMPARTV 436

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKP 499
           V   + KW+G++H  +  GEY Q++GRAGRRG D  G  +++     +   +  +   + 
Sbjct: 437 VIEKLDKWNGETHVALTPGEYTQLTGRAGRRGIDVEGHAVVVWQPGTDPEMVAGLAGTRT 496

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE---- 555
            PL S+F+ SY   +NL+++  G+     ++++SF QFQ ++++  + +K+   +E    
Sbjct: 497 YPLNSSFQPSYNMAVNLVAQV-GRERGRAMLESSFAQFQADRSVVGLVRKLRAQQEALEG 555

Query: 556 -EAASLDASGEAEVAEYHKLKLDIAQLE-----KKLMSEITRPERVLYYLGSGRLIKVRE 609
              A+ D  G  +  EY  ++  ++ LE      +  +     ER L  L +G +I++  
Sbjct: 556 YAKAAYDPRG--DFMEYAAMRRRLSDLESAAQRNRRTARRKEAERSLRALRTGDIIRI-P 612

Query: 610 GGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKI-------------R 656
            G   G+ VV++    P    G LP       VP+ L +   + ++             R
Sbjct: 613 SGRHAGYAVVLD----PGLDKGPLP-------VPLVLTVNRQVKRVSANDFPIPVEPTGR 661

Query: 657 LSVPPDL--RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELE 714
           L +P     R   AR+ +  A++      P   P  + V+D   EDPE+ +L  +I E  
Sbjct: 662 LRIPKSFSARSAQARRDLASALRSKLETLPTA-PIRHRVRDGAPEDPEIAELRARIRE-- 718

Query: 715 HKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLK 771
                HP + S+  E++ R  +R   +  E ++L+ ++  R   I +  D +     VL+
Sbjct: 719 -----HPCHHSEGREDRARWAERYFRLKKETEELERRIESRSHVIARTFDRVCG---VLQ 770

Query: 772 KLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSS 831
           +L +++ D V +  GR    I +  +LL  E +  G ++ L   ++AA  S  +   +  
Sbjct: 771 ELDYLEGDTVTE-DGRLLSRIYSELDLLAAESLRRGVWDALGPEELAACVSALVYESRRP 829

Query: 832 EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV--IYCWSKG 889
           +++  R+    P   ++E+   +  +  E   ++     V     P L  V   Y W++G
Sbjct: 830 DEVFARV----PSGPVEEALNAMMRLWGELS-DIEHRHRVSFLREPDLGFVWPTYRWARG 884

Query: 890 ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFA-AASESLRRGIM 948
                ++    +  G  +RS ++L + L Q+   AQAV E +  +  A  A++ L RG++
Sbjct: 885 DQLDHILNEAGMPAGDFVRSTKQLIDLLGQI---AQAVPEASGVRTTARQAADKLMRGVV 941

Query: 949 FSNSL 953
              S+
Sbjct: 942 AYTSV 946


>gi|311742488|ref|ZP_07716297.1| DEAD/DEAH box family ATP-dependent RNA helicase [Aeromicrobium
           marinum DSM 15272]
 gi|311314116|gb|EFQ84024.1| DEAD/DEAH box family ATP-dependent RNA helicase [Aeromicrobium
           marinum DSM 15272]
          Length = 906

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 278/918 (30%), Positives = 443/918 (48%), Gaps = 67/918 (7%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E    Y F LD FQ  +   +E    VLV+A T +GKT V E+A+ +A    ++  YT+P
Sbjct: 22  EFRGAYPFALDQFQVDACRVVEDGHGVLVAAPTGSGKTIVGEFAVHLAIATGRKCFYTTP 81

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQK+ +  + +  ++VGL+TGD +++  A  +VMTTE+LR MLY GS  L  + +
Sbjct: 82  IKALSNQKFHDFGERYGEENVGLLTGDNSVNGEAPVVVMTTEVLRNMLYAGSRTLDGLGF 141

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RGVVWEE II LP ++ +V LSAT+SNA +F +W+  +      +V 
Sbjct: 142 VVMDEVHYLADRFRGVVWEEVIIGLPESVAIVSLSATVSNAEEFGDWLTEVRGDTVTIV- 200

Query: 246 TDFRPTPLQHYV------FPVGGSGLYLVVDEKEQF-REDNFVKLQDTFLKQKIGGRREN 298
            + RP PL  +V      FP     L+   DE  +  R+      +D  L +   GR + 
Sbjct: 201 EERRPVPLHQHVLVGRQMFP-----LFESADEGPRVNRQLERFAREDWQLGRMHQGRPKK 255

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQ--HAMSMSKLDFNT 356
           G    R              ++V+ +      P I F FSR  C      +S ++L   T
Sbjct: 256 GGHRPRTRHRTPSR-----VELVEKLAAEGLLPAICFVFSRAGCSAAVQQLSDARLILTT 310

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
            +E+  +E     A   L +ED ++         L RG+A HH+G+LP  KE VELLF  
Sbjct: 311 PDERQEIEATVDAACAHLPDEDLHVLGYHEFREALGRGVAAHHAGMLPTFKECVELLFSR 370

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLV+ +FATET A+G+NMPA++VV   + KW+G++H  I  GEY Q++GRAGRRG D  G
Sbjct: 371 GLVRVVFATETLALGINMPARSVVIEKLSKWNGETHAEISPGEYTQLTGRAGRRGIDVEG 430

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             +++    ++   +  +   +  PL S+F  SY   +N++ +  G+ TA  +++ SF Q
Sbjct: 431 HAVVLWQAGLDPRQVAGLASTRTYPLNSSFMPSYNMAVNMVGQV-GRSTARQLLEQSFAQ 489

Query: 537 FQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPE 593
           FQ ++A+  + +++ K E+       S    +    EY  ++ +I+ +E     +    E
Sbjct: 490 FQADRAVVGLARQIRKAEDALEGYAESATCHLGDFMEYASMRREISDIEAAGAKQRRAAE 549

Query: 594 R-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPL 648
           R      L  L  G +I+V  G   W    VV     P+   G  P          +L L
Sbjct: 550 RDDVATSLQALKRGDIIQVPTG--RWAGTAVVLDPGAPTDREGPRPMVLTAGRHARRLAL 607

Query: 649 ISTLSKI----RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVV 704
           +     +    +L +P    P + +    LA   L  R     P     +    E P  V
Sbjct: 608 VDFTVPVEPVGQLRIPKHFNPRNPQSRRDLAAL-LRDRTVDLRPHHARARR---EGPSGV 663

Query: 705 DLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR--KAEVNHEIQQLKSKMRDSQIQKFRD 761
           D   +I EL   +  HP +   D E+  R  +R  K E +   Q+ + + R + + +  D
Sbjct: 664 D--PRITELRRLIKEHPCHGCPDRESHARWAERYLKLERDTVGQRRRIETRTNTVARQFD 721

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            +     VL  LG+++ D V     R   L    D L+V+E +  G ++ L+   +A++ 
Sbjct: 722 RV---CEVLDVLGYLEGDTVTPAGQRLQRLYGELD-LVVSECLARGVWDGLEPSDLASVV 777

Query: 822 SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDE------YVESTV 875
           S      +  E        A P +     AR++A+   E   E+   E      ++ S  
Sbjct: 778 SGLTYTSRVVED-------APPPRFGSRRAREVADEMTELHGELAHLERQHRLRFLRSPD 830

Query: 876 RPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKK 935
             F  + +  W  GA+  EV+ +TD+  G  +RS ++L + L Q+   A A G+  +   
Sbjct: 831 FGF-AEAVGRWVDGASLDEVLGLTDLAAGDFVRSMKQLIDVLAQV---AVAAGDSPVRSS 886

Query: 936 FAAASESLRRGIMFSNSL 953
              A E LR G++  +SL
Sbjct: 887 ARRALEQLRHGVVSYSSL 904


>gi|440682616|ref|YP_007157411.1| DSH domain protein [Anabaena cylindrica PCC 7122]
 gi|428679735|gb|AFZ58501.1| DSH domain protein [Anabaena cylindrica PCC 7122]
          Length = 890

 Score =  355 bits (912), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 277/881 (31%), Positives = 460/881 (52%), Gaps = 86/881 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQ  ++A L    SV+V A T +GKT + EYAI  A    +RV YT+P
Sbjct: 11  DLGSIFPFELDQFQLDAIASLNAGRSVVVCAPTGSGKTLIGEYAIYRALARGKRVFYTTP 70

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+  ++F  + VGL+TGD +++ +A  LVMTTEI R MLY G+ +      
Sbjct: 71  LKALSNQKLRDFREKFGFEQVGLLTGDASINRDAPILVMTTEIFRNMLY-GTPIGQIGIS 129

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L +V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  +W+  +H  
Sbjct: 130 LVDVEAVVLDECHYMNDRQRGTVWEESIIYCPREVQLVALSATVANSDQLTDWLNRVHG- 188

Query: 240 PCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN 298
           P  ++Y+DFRP PL+ HY  P    GL+ +++       D+  K+    +K+   G+ E 
Sbjct: 189 PTDLIYSDFRPVPLEFHYCNP---KGLFPLLN-------DSNTKINPRLIKRGKKGKPEK 238

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
           G+       GG     S I+ + ++  +R   P I F FSRR C++    +  L     +
Sbjct: 239 GR-------GGRPEAPSIIYTLSQL-EQRDMLPAIYFIFSRRGCDKAVAEVGDLWLVNND 290

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E     Q+ +  +D     + +      + PL  RG+A HH+G+LP  K LVE LFQ+GL
Sbjct: 291 ES----QILRRQIDDFLNRNPDAGRSGQIAPLY-RGVAAHHAGILPAWKGLVEELFQQGL 345

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           +K +FATET A G+NMPA+T V + + K   + HR + + E++QMSGRAGRRG D +G  
Sbjct: 346 IKVVFATETLAAGINMPARTTVISTLSKRTDNGHRLLKASEFLQMSGRAGRRGMDLQGY- 404

Query: 479 IIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           ++ V    E       +   PA PLVS F  SY  +LNL+     +  A  +I+ SF Q+
Sbjct: 405 VVTVQTPFEGAKEAAYLATSPADPLVSQFTPSYGMVLNLLQTHTLE-RARELIERSFGQY 463

Query: 538 --------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKL--KLDIAQLEKKLMS 587
                   +Y++ + +I  +++KL+ E A +D   E E+A Y KL  +L + +   K + 
Sbjct: 464 MATLHLRPEYDE-IGEIEAELAKLQAELADID---ENELALYEKLRQRLKVERHIFKTLQ 519

Query: 588 EITRPER------VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT-----LPSR 636
           E  + +R      +L +  SG ++ + +        +   +V K ++   T     L   
Sbjct: 520 EQAQADRQEQLSMMLDFAISGTMLSLNDKNMTATLPITAILVGKATSPGQTSYFVCLGKD 579

Query: 637 GGGYIVPVQ--LPLISTLSKIRLSVPPDLRP---LDARQSILLAVQELESRFPQGLPKLN 691
              Y+      + L + L K+ +S  PD+ P   L  ++   ++  E      Q +P  +
Sbjct: 580 NRWYVATTADVVDLYAELPKVEVS--PDILPPSELAIKRGQCVSGSEETLAIAQSIP--D 635

Query: 692 PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM 751
           P + M +  PEV + ++++  ++ +L  HPL++S +   I  F+R+A       +L+   
Sbjct: 636 PGEFMYMP-PEVAEQLSRVNAVQAQLENHPLHQSGNVATI--FKRRARCVELEAELEEVQ 692

Query: 752 R--DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
              + Q Q+  +E  N   +L++ G ++     QL G+ A  I   +EL +  ++ +G  
Sbjct: 693 GQVEQQSQRHWEEFLNLIHILQQFGGLENLIPTQL-GQMAAAIRGENELWLGLVIASGEL 751

Query: 810 NDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
           ++LD H +AA A+  +   P   S  + +L  E+A  L +L+   R++ +IQ    + + 
Sbjct: 752 DNLDPHHLAAAAAALVTETPRPDSKVRFDLSNEVADALAKLRGIRRQLFQIQRRYNVALP 811

Query: 867 VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
           +    E      L+ ++  W+ G  + E+   T + EG ++
Sbjct: 812 IWLEFE------LIAIVEQWALGKEWVELCANTTLDEGDVV 846


>gi|294889605|ref|XP_002772881.1| helicase, putative [Perkinsus marinus ATCC 50983]
 gi|239877461|gb|EER04697.1| helicase, putative [Perkinsus marinus ATCC 50983]
          Length = 571

 Score =  355 bits (912), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 163/247 (65%), Positives = 198/247 (80%), Gaps = 9/247 (3%)

Query: 37  SCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLV 96
           +C+HE  +P+ +A  K          P Y GE AKTY + LD FQ  +V+CLER+ESVLV
Sbjct: 287 NCLHECILPANWAKEK--------RLPKYEGEPAKTYPYTLDRFQSEAVSCLERSESVLV 338

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF-KDVGLMTGDVTL 155
           SAHTSAGKT VAEYAIAM+ RD QRVIYTSP+KALSNQKYR+L  EF  DVGLMTGDVT+
Sbjct: 339 SAHTSAGKTTVAEYAIAMSMRDNQRVIYTSPIKALSNQKYRDLADEFGSDVGLMTGDVTI 398

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +PNASC++MTTEILR MLYRGS+V +EV WVIFDE+HYM+DR+RGVVWEE++I LP  ++
Sbjct: 399 NPNASCMIMTTEILRSMLYRGSDVCREVKWVIFDEVHYMRDRDRGVVWEETMILLPDTVR 458

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            VFLSAT+ NA +FAEWIC +  QPCH++YTD+RP PLQHYV+P  G G+YL VDEK +F
Sbjct: 459 FVFLSATIPNAREFAEWICRIKHQPCHLIYTDYRPVPLQHYVYPSMGDGVYLTVDEKGKF 518

Query: 276 REDNFVK 282
           REDN+ K
Sbjct: 519 REDNYGK 525


>gi|350569109|ref|ZP_08937506.1| superfamily II RNA helicase [Propionibacterium avidum ATCC 25577]
 gi|348660687|gb|EGY77394.1| superfamily II RNA helicase [Propionibacterium avidum ATCC 25577]
          Length = 919

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 282/918 (30%), Positives = 445/918 (48%), Gaps = 106/918 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVTACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVVVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPQVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVG---------------GSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGR 295
            PL  +V  VG                  L  +  E+ +F+ D+  + +    K    G+
Sbjct: 191 VPLTQHV-AVGRRLHDLFGDRRLTDVNPELISIAKEESRFQRDDSRRPRGRSGK----GK 245

Query: 296 RENGKASGRMAKGGS---GSGGSDI----------FKIVKMIMERKFQPVIVFSFSRREC 342
           R     SGR     +   G GG D            ++V+ +      P I+F FSR  C
Sbjct: 246 RNVSFGSGRFGGASAQRRGRGGRDKPRGPRNQPSRIQVVRSLQRANLLPAIIFVFSRAGC 305

Query: 343 EQHAMSMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHS 400
           +     +   D    +Q E   + ++ +   + L +E+R        +   +RGIA HH+
Sbjct: 306 DAAVSQLLNTDLVLTSQREARQLRRIAERHGEGLTDEERRAVGWNHFVAAFERGIAAHHA 365

Query: 401 GLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEY 460
           GLLPV+K +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY
Sbjct: 366 GLLPVLKAIVEEGFVAGLLKVVIATETLALGINMPARTVVLEKLVKYNGQTHADITPGEY 425

Query: 461 IQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRA 520
            Q++GRAGRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  +
Sbjct: 426 TQLTGRAGRRGIDTQGHAVVCWQAGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-S 484

Query: 521 EGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEA-ASLDASG--EAEVAEYHKLKLD 577
            G+  A  ++++SF QFQ ++ L     +  K + E  A L A+     + AEY +++ +
Sbjct: 485 MGREKARDLLEHSFAQFQTDRRLGGSAVRSRKTQSEIDAYLKAAHCEHGDFAEYARMREE 544

Query: 578 IAQL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
           I +L  E+  + +  RP +V   L  L SG +I V   G   GW VVV+         GT
Sbjct: 545 IGELEHEQARLRKGERPSQVADSLSRLDSGDVIAV-PSGPYAGWVVVVD--------PGT 595

Query: 633 LPSRGGGYIVPVQLPLISTLSKIRL---------------SVPPDLRPLDA--RQSILLA 675
              RG     P  L +    + IRL               +VP    P +   R+S+  A
Sbjct: 596 HGKRGK---RPHPLVMTPGRTVIRLGHEDVDAPVKRVAGVTVPRHFHPGNQADRRSLGKA 652

Query: 676 VQELESRFPQGLPKLNPVKDMKIEDPEV-VDLVNQIEELEHKLFAHPLNKSQD-ENQIRC 733
           +  +      G P + P +      PEV  +L  +I EL  ++  HP +   D E+  R 
Sbjct: 653 LDRVLDGL--GQPVIQPKR------PEVDAELAERIRELRARMRQHPCHSCPDRESHARF 704

Query: 734 FQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV-VQLKGRAACLI 792
            +R   ++   ++  +K R ++      + +    VL+ LG++   G  V   GR    I
Sbjct: 705 AERAMRLSRRSERELAKAR-AKATSIATQFERIVLVLEALGYLGEGGQDVTDAGRMLSGI 763

Query: 793 DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
            +  +L+  E +  G F+ LD+ Q+AA+ S  +   +  ++ +        L ++ +   
Sbjct: 764 YSELDLVTAEAIRRGVFDKLDYPQLAAVLSTIVHESRPGDRGH--------LHRMPDHGS 815

Query: 853 KIAEIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSI 906
           + AE Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  
Sbjct: 816 ESAESQLRAVRAEIGLLERDHRIERPRDLDIGFAEMAYAWAAGAGLETVLD--DMSAGDF 873

Query: 907 IRSARRLDEFLNQLRAAA 924
           +R  R++ +   Q+  A 
Sbjct: 874 VRRVRQVCDLAGQIAHAG 891


>gi|134098834|ref|YP_001104495.1| ATP-dependent RNA helicase [Saccharopolyspora erythraea NRRL 2338]
 gi|291005808|ref|ZP_06563781.1| putative ATP-dependent RNA helicase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133911457|emb|CAM01570.1| putative ATP-dependent RNA helicase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 925

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 279/933 (29%), Positives = 453/933 (48%), Gaps = 87/933 (9%)

Query: 35  TRSCVHEVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESV 94
           +RS + +++   GYA     + H   A+  + GE+    SFELDPFQR +   LE    V
Sbjct: 4   SRSNIAKLSPAEGYAAHTRRSAHPKLAD--FAGEL----SFELDPFQRTACQALESGHGV 57

Query: 95  LVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGD 152
           LV A T AGKT V E+A+ +A  + ++  YT+P+KALSNQKY +L + + +  VGL+TGD
Sbjct: 58  LVCAPTGAGKTVVGEFAVHLALSEGRKCFYTTPIKALSNQKYADLCERYGEDAVGLLTGD 117

Query: 153 VTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPP 212
            +++ NA  +VMTTE+LR MLY GS  + ++ +V+ DE+HY+ DR RG VWEE I+ LP 
Sbjct: 118 TSINGNAQVVVMTTEVLRNMLYAGSSTVDQLGYVVMDEVHYLADRFRGAVWEEVILHLPE 177

Query: 213 AIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL-QHYVFPVGGSGLYLVVDE 271
            +++  LSAT+SNA +F EW+  + +    VV  + RP PL QH +    GS ++ +   
Sbjct: 178 YVQLASLSATVSNAEEFGEWLVEV-RGDTTVVVDEHRPVPLWQHMLV---GSRMFDLFGG 233

Query: 272 KEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSG-------GSDIFKIVKMI 324
           +   RE   +K+    L+      R +     R    G   G            +I+  +
Sbjct: 234 ETTDRE---LKINPNLLRHTQELSRVHTPYGRRGGPNGKRRGPRPPRFYAPSRVEILNGL 290

Query: 325 MERKFQPVIVFSFSRRECEQHAMSM---SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNL 381
                 P IVF FSR  C+  A+S    + +   +++E D + +V       L E D  +
Sbjct: 291 DAAGLLPAIVFIFSRAGCDA-AVSQCVRAGMRLTSEDEVDEIRRVIDEHTSNLPESDLTV 349

Query: 382 PAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVF 441
                    L+RG+A HH+GLLP  KE VE LF  GLVKA+FATET A+G+NMPA+TVV 
Sbjct: 350 LGYWEWREALERGLAAHHAGLLPAFKETVEELFVRGLVKAVFATETLALGINMPARTVVL 409

Query: 442 TAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAP 501
             + K++G+SH  +  GEY Q++GRAGRRG D  G  +++    ++   +  +   +  P
Sbjct: 410 ERLVKFNGESHVDLSPGEYTQLTGRAGRRGIDVEGHAVVVWQPGIDPKGVAGLASTRTYP 469

Query: 502 LVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLD 561
           L S+FR  Y   +NL+ R  G+ +A  +++ SF QFQ ++++  + ++V +    A +LD
Sbjct: 470 LRSSFRPGYNMAVNLVQRV-GRESARELLEQSFAQFQADRSVVGMSRRVDR---NADALD 525

Query: 562 ASGEA------EVAEYHKLKLDIAQLEKKLMSEITRPERV-----LYYLGSGRLIKVREG 610
              E+      +  EY  L+  I+  EK L  +     R      L  L  G +I V   
Sbjct: 526 GYAESMRCHLGDFEEYFGLRKRISDREKALARQNRASRRAEAAKSLERLRKGDVIAV-PA 584

Query: 611 GTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKI--RLSVPPDLRPLDA 668
           G   G  VV++   +P               +    PL+ T  +   RLSV     P++A
Sbjct: 585 GRRSGLAVVIDPGLEP---------------MGEPRPLVVTEDRWAGRLSVADFTSPVEA 629

Query: 669 RQSILLAVQELESRFPQGLPKL-NPVKDMKIEDP-------EVVDLVNQIEELEHKLFAH 720
              I L  + +++R P+    L + +++  I  P              ++  L   L AH
Sbjct: 630 LGRIKLP-KHVDTRSPKSRRDLASTLRNTGISTPGGRSRRRADAADDAELASLRRALKAH 688

Query: 721 PLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD------ELKNRSRVLKKL 773
           P +   + EN  R  +R   +  E +QL+ K+  +     R        L  R  VL   
Sbjct: 689 PCHGCDERENHARWAERHERLRGETEQLRRKVAATTHSLARSFDRIIALLAERDYVLLDE 748

Query: 774 GHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ 833
              DA+  V   GR    + +  +LL  E +  G +  L   ++AA+ S  +   +    
Sbjct: 749 ---DAEEPVTEHGRRLTRLYSESDLLAAECLRVGVWEKLGPPELAAVVSSLVYESRREGP 805

Query: 834 INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFA 893
           +   +        LQ + +   E++++ +    +D   E    P     ++ W++G +  
Sbjct: 806 MAPAVPSGAVSDALQATWQLWGELEDDERRH-KLDRTREPD--PGFAWPVFRWARGESLE 862

Query: 894 EVIQMT-----DIFEGSIIRSARRLDEFLNQLR 921
            V+        ++  G  +R  R++ + L+Q+R
Sbjct: 863 RVLTAAESTGHELSAGDFVRWCRQVVDLLDQIR 895


>gi|345013945|ref|YP_004816299.1| DSH domain-containing protein [Streptomyces violaceusniger Tu 4113]
 gi|344040294|gb|AEM86019.1| DSH domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 940

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 289/934 (30%), Positives = 455/934 (48%), Gaps = 79/934 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FELDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFELDPFQIEACKALESGKGVLVAAPTGSGKTIVGEFAVHLALTQGRKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  +  V+ DE
Sbjct: 92  NQKYADLVKRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQALLGLGHVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED---------NFVKL------QDTFLKQKIGGR 295
            PL  +V    G  +Y + +EK     D         + V+L      + TF + K  GR
Sbjct: 211 VPLWQHVL--AGRRMYDLFEEKSGQDGDQSGRREVNPDLVRLARMESSRPTFGRDKRRGR 268

Query: 296 RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLD 353
                   R  +  S        +++  +      P I F FSR  C+        + L 
Sbjct: 269 NMREADRERERRQRSRIWTPGRAEVIDRLDSEGLLPAITFIFSRAGCQAAVQQCLHAGLR 328

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
            N +  +  V  + +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE L
Sbjct: 329 LNDEAARARVRALVEERTAGIPDEDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVEEL 388

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D
Sbjct: 389 FVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGID 448

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    M+   L  +   +  PL S+FR SY   +NL+S+  G+  +  +++ S
Sbjct: 449 VEGHAVVLWQRTMDPAALAGLAGTRTYPLRSSFRPSYNMAVNLVSQF-GRHRSRELLETS 507

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSE-- 588
           F QFQ +KA+  I ++V + EE      AS    +    EY +L+ ++   E +L  E  
Sbjct: 508 FAQFQADKAVVGISRQVQRNEEGLEGYRASMTCHLGDFDEYARLRRELKDRETELAKEGA 567

Query: 589 ---ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQ 645
                     L  L  G +I V  G         + +V  P    G +    G       
Sbjct: 568 AQRRAAAAVALEKLRPGDVIHVPTGKF-----AGLALVLDPGLPAGRVGGHRGMEYHDGP 622

Query: 646 LPLIST-------LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL-------- 690
            PL+ T       L+ I   VP  + PLD R  I    +    R PQ    L        
Sbjct: 623 RPLVLTAERQVKRLASIDFPVP--VEPLD-RMRI---PKSFNPRSPQSRRDLASALRTKA 676

Query: 691 --NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQL 747
             + V   + E     D   +I  L   + AHP +   D E+  R  +R   +  + +QL
Sbjct: 677 GHHDVGRRRKERSAAAD-DTEIARLRAAIRAHPCHGCSDREDHARWGERYQRLLRDTRQL 735

Query: 748 KSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           + ++  R + I +  D + +   +L +LG++  D V  +  R A L    D LL +E + 
Sbjct: 736 ERRIEGRTNTIARTFDRICS---LLSELGYLRDDEVTDVGKRLARLYGELD-LLASECLR 791

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQESAR---KIAEIQNEC 861
            G +  L   ++AA AS  +   ++++  +  ++   +    L E  R   ++  ++ E 
Sbjct: 792 EGVWEGLPPAELAACASALVYEARTADDALPPKLPPGRAKDALGEMVRIWGRLDALEEEH 851

Query: 862 KLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
           K  +N  E V     P L      Y W+ G    EV++  D+  G  +R  ++L + L Q
Sbjct: 852 K--INQAEGV-GQREPDLGFAWAAYRWASGHGLDEVLREIDMPAGDFVRWTKQLIDVLGQ 908

Query: 920 LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + AAA    E  + +    A + L RG++  +S+
Sbjct: 909 IAAAAP---EGTVARNARRAVDGLLRGVVAYSSV 939


>gi|441149236|ref|ZP_20965180.1| ATP-dependent RNA helicase [Streptomyces rimosus subsp. rimosus
           ATCC 10970]
 gi|440619626|gb|ELQ82670.1| ATP-dependent RNA helicase [Streptomyces rimosus subsp. rimosus
           ATCC 10970]
          Length = 939

 Score =  355 bits (911), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 291/936 (31%), Positives = 454/936 (48%), Gaps = 84/936 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFALDPFQIDACKALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTTPIKALS 91

Query: 133 NQKYREL--HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY++L        VGL+TGD +++  A  +VMTTE+LR MLY GS  L  + +V+ DE
Sbjct: 92  NQKYQDLVRRHGADRVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSRSLAGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F  W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGAWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQ-------FREDN-----FVKLQD---TFLKQKIGGR 295
            PL  +V    G  +Y + +E+E         RE N       +L++   TF + K  GR
Sbjct: 211 VPLWQHVL--AGRRMYDLFEEREGQGKGKAGRREVNPDLERLARLENSRPTFGRDKRRGR 268

Query: 296 RENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLD 353
            +      R  +  S        +++  + +    P I F FSR  CE        S L 
Sbjct: 269 NQREADRERERRQRSRIWTPGRAEVIDRLDQEGLLPAITFIFSRAGCESAVQQCLYSGLR 328

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
            N QE +  V  + +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE L
Sbjct: 329 LNDQEGRARVRAIVEERTAGIPDEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEEL 388

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F +GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D
Sbjct: 389 FLKGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGID 448

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    M+   L  +   +  PL S+F+ SY   +NL+S+  G+  +  +++ S
Sbjct: 449 VEGHAVVLWQRGMDPGALAGLAGTRTYPLRSSFKPSYNMAVNLVSQF-GRHRSRELLEMS 507

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMS 587
           F QFQ +K++  I ++V + EE    LD   E+      +  EY +L+  +   E +L  
Sbjct: 508 FAQFQADKSVVGISRQVQRNEE---GLDGYKESMTCHLGDFEEYARLRRQLKDRETELAK 564

Query: 588 E-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIV 642
           +            L  L  G +I V  G         + +V  P    G      G    
Sbjct: 565 QGAAQRRAAAAAALEKLRPGDVIHVPTGKY-----AGLALVLDPGMPSGRTNGHRGHDAH 619

Query: 643 PVQLPLIST-------LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL----- 690
               PL+ T       L+ I   VP  + PLD R  I    +   +R PQ    L     
Sbjct: 620 DGPRPLVLTAERQVKRLASIDFPVP--VAPLD-RMRI---PRTFNARSPQSRRDLASALR 673

Query: 691 ------NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHE 743
                  P +  K       D   +I  L  ++ AHP +   + E+  R  +R   +  +
Sbjct: 674 TKAGHIAPERHRKQRATAADD--REIARLRTEIRAHPCHGCDEREDHARWAERYHRLLRD 731

Query: 744 IQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
            +QL+ ++  R + I +  D +     +L +LG+++ D V     R A L    D LL +
Sbjct: 732 TRQLERRIEGRTNTIARTFDRICG---LLTELGYLEGDTVTDEGRRLARLYGELD-LLAS 787

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQESARKIAEIQN- 859
           E +  G +N L   ++AA AS  +   + ++  +  ++   K    L E  R    +   
Sbjct: 788 ECLRAGVWNGLGPAELAACASALVYESRQADDAVAPKLPSGKARDALSEMVRIWGRLDAL 847

Query: 860 ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
           E   ++N  E V     P L      Y W+ G    EV++  ++  G  +R  ++L + L
Sbjct: 848 EEDHKINQAEGV-GQREPDLGFAWAAYRWASGFGLDEVLREAEMPAGDFVRWCKQLIDIL 906

Query: 918 NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            QL AAA      N  K    A +++ RG++  +S+
Sbjct: 907 GQLAAAAPPEVARNARK----AVDAVLRGVVAYSSV 938


>gi|405979745|ref|ZP_11038086.1| hypothetical protein HMPREF9241_00809 [Actinomyces turicensis
           ACS-279-V-Col4]
 gi|404391120|gb|EJZ86184.1| hypothetical protein HMPREF9241_00809 [Actinomyces turicensis
           ACS-279-V-Col4]
          Length = 922

 Score =  355 bits (911), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 264/904 (29%), Positives = 439/904 (48%), Gaps = 109/904 (12%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
           +T  F+ D FQ  ++  LE  +SVLV+A T AGKT V E+A  +A +  +R  YT+P+KA
Sbjct: 47  ETLGFQADDFQIEAMDALEAGQSVLVAAPTGAGKTVVGEFATYLALQKGKRSFYTTPIKA 106

Query: 131 LSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQK+ +L + F +  VGL+TGD +++ +A  +VMTTE+LR M+Y G++ L ++  V+ 
Sbjct: 107 LSNQKFSDLRRRFGEDTVGLLTGDTSINSHAPIVVMTTEVLRNMIYAGAD-LSDLDSVVL 165

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ DR RG VWEE II LP   K+V LSAT+SNA +F  WI H+ +  C VV ++ 
Sbjct: 166 DEVHYLADRFRGPVWEEVIIHLPAEQKIVALSATVSNAEEFGTWIGHV-RGGCRVVVSEH 224

Query: 249 RPTPL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           RP PL QH +       LY    + E  R +  ++                  A G    
Sbjct: 225 RPVPLYQHMLVGRHLYDLYSPSKKGESTRINPELR-----------------SAIGPSIP 267

Query: 308 GGSGSGGSDIFKIVKMIMERKFQP-------------VIVFSFSRRECEQHAMSM--SKL 352
           G +G GG +  +  ++   R+ +P              I F FSR  CE     +  + +
Sbjct: 268 GRTGRGGRNWHETARVRPPRESRPSTLIELDRAGLLPTITFVFSRAGCEDAVTQVVHAGI 327

Query: 353 DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
               +EE+  +          +  +D ++  I      L+RGIA HH+GLLP+ KE VE 
Sbjct: 328 WLTNKEEQKQIATAVDEVKTQVGAQDCHVLGINAWGEALERGIAAHHAGLLPIQKETVEN 387

Query: 413 LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
           LF  GL+K ++ATET A+G+NMPA++VV  +++KW+G +H  +  GEY Q+SGRAGRRG 
Sbjct: 388 LFTRGLIKMVYATETLALGINMPARSVVIESLRKWNGAAHVQLTPGEYTQLSGRAGRRGI 447

Query: 473 DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
           D  G  I++   Q+    +  +   +  PL+S F  +Y  ++NL+  +    T + V++ 
Sbjct: 448 DTEGHAIVLHRGQVAPEEVNALASKRTYPLISAFTPTYNMVVNLLHHSSRAATRD-VLET 506

Query: 533 SFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIA---QLEKKLM 586
           SF QFQ +  + ++ +    L  + A  +   E    +  EY  L+ D+    + E KL 
Sbjct: 507 SFAQFQADGGVVELAQHARALARQRAKFEQDMECDRGDAREYFALRDDLVLAQKSESKLR 566

Query: 587 SEITR-----------PERVLYYLGSGR--LIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
           +   R           P  ++ Y GSGR  L  V    +D   G V   V        +L
Sbjct: 567 AAEKRSANRVALATCQPGTIIRY-GSGRRSLYAVVAFHSDTAIGHVSTTVIGTDGKFHSL 625

Query: 634 PSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR-------FPQG 686
            ++     V     ++ ++   +++    +R    R  I     EL+ R        P  
Sbjct: 626 SAKD----VSSSFAVVGSM---KIAGGSAVRRNKERMKI---ADELKRRIRAKSLEIPLD 675

Query: 687 LPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQ 745
            P  +  K  +IE                +L AHP+++  + E+  R   + A +N E++
Sbjct: 676 TPDFDATKSAQIEK---------------QLKAHPVHQCPEREHHARAGHQWARINRELR 720

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
            +  ++ DS+      +     +VL++LG +D D V     R   +    D ++V E + 
Sbjct: 721 TVNERI-DSRTHSVAHKFDRVCQVLEELGFLDGDTVTDQGERLRHIFGERD-IIVMECLR 778

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSE------QINLRMELAKPLQQLQESARKIAEIQN 859
           +G ++ LD  ++AA+ S  +   +  +       + L   L + L+   +++ K+A+++ 
Sbjct: 779 SGAWSGLDDAELAAIVSTCVFESRREDGARPALPVGLSKNLTRALKATLQASAKVADVEK 838

Query: 860 ECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
              L        E T  P   +M+    W+ GA+    +   ++  G  +R  R++ + L
Sbjct: 839 RAGL--------EPTTEPDSGMMEACLAWAHGASLGTSLDGEEMLGGDFVRWIRQVMDLL 890

Query: 918 NQLR 921
           +QLR
Sbjct: 891 DQLR 894


>gi|269126555|ref|YP_003299925.1| DSH domain-containing protein [Thermomonospora curvata DSM 43183]
 gi|268311513|gb|ACY97887.1| DSH domain protein [Thermomonospora curvata DSM 43183]
          Length = 916

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 277/907 (30%), Positives = 454/907 (50%), Gaps = 50/907 (5%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FELD FQ  +   LE  + VLV+A T +GKT V E+A+ +A  + ++  YT+P+KALS
Sbjct: 33  YDFELDEFQLEACRALEAGKGVLVAAPTGSGKTVVGEFAVHLALLEGRKCFYTTPIKALS 92

Query: 133 NQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS  L  +A+V+ DE
Sbjct: 93  NQKYADLVRRYGPGKVGLLTGDNSVNGEAPIVVMTTEVLRNMLYAGSPTLAGLAFVVMDE 152

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II +P ++++V LSAT+SNA +F EW+  +  +   V+  + RP
Sbjct: 153 VHYLADRFRGAVWEEVIIHVPDSVRIVALSATVSNAEEFGEWLQEVRGETA-VIVDEHRP 211

Query: 251 TPL-QHYVFPVGGSGLY-LVVDEKE-QFREDNFVKLQDTFLKQKIGGRRENGKASGR-MA 306
            PL QH +    G+ LY L VD  + Q R     +L++  +++    +  +G+ +GR   
Sbjct: 212 VPLFQHMLV---GNRLYDLFVDTGDGQDRPKINPQLRNIAVEEIRRAKINSGRRTGRKRI 268

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVE 364
                       ++++ +      P I F FSR  C+        + L   +++E + + 
Sbjct: 269 ARPPRFRPPSRPEVIQRLDRAGLLPAITFIFSRAGCDAAVAQCLHAGLRLTSRQEAEEIR 328

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
              +     L +ED  +   +  L  L RGIA HH+G+LP  KE+VE LF  GL+KA+FA
Sbjct: 329 AHVELRTADLADEDLRVLGYDQWLEGLMRGIAAHHAGMLPTFKEIVEELFVRGLIKAVFA 388

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A+G+NMPA+TVV   + KW+G++H  +  GEY Q++GRAGRRG D  G  +++   
Sbjct: 389 TETLALGINMPARTVVIEKLDKWNGETHADLTPGEYTQLTGRAGRRGIDVEGHAVVIWSP 448

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            M+   +  +   +  PL S+FR SY   +NL+  A G+  A ++++ SF QFQ ++A+ 
Sbjct: 449 GMDPFAVAGLAGTRTYPLNSSFRPSYNMAVNLVG-AVGRERARNLLEESFAQFQADRAVV 507

Query: 545 DIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPERVLYYLGS 601
            + ++V + EE  A    +    +    EY  L+  ++  E +L  E +   R       
Sbjct: 508 GLARQVHRNEEALAGYAEAAACHLGDFMEYAALRRRLSDREAELARERSSARRAEAIRS- 566

Query: 602 GRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPP 661
             L ++R G       +VV   ++    V   P  G     P  L L +  S  RLSV  
Sbjct: 567 --LERLRPGDV-----IVVPSGRRSGLAVVLDPGLGRRSDGPAPLVLTAQRSVQRLSVLD 619

Query: 662 DLRPLDARQSILLAVQELESRFPQGLPKL-----NPVKDMKIE-------DPEVVDLVNQ 709
              P++  + I +  +    R PQ    L     N V D +++        P V D   +
Sbjct: 620 FPHPVEPIERIRIP-RSFSPRSPQQRRDLAATLRNKVPDAQVKAHRGRRSTPAVDD--EE 676

Query: 710 IEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
           I  L  ++  HP +   + E+  R  +R   +  +   L+ ++ + + Q           
Sbjct: 677 ISRLRREIRRHPCHGCDEREDHARWAERYFRLKRDTDALRRRV-EGRSQVIARTFDRVCA 735

Query: 769 VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           VL++LG+++ D V + +GR    I    +LL  E +  G + +L+  ++AA  S  +   
Sbjct: 736 VLEQLGYLEGDTVTE-EGRRLGRIYNELDLLTAESLRAGLWEELEPAELAACVSALV--- 791

Query: 829 KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFL--MDVIYCW 886
             S Q +       P    QE+   +  +  E +  +  D  V     P L      Y W
Sbjct: 792 YESRQPDDAATPRTPPGAAQEALAAMMRLWGELE-AIERDNRVSFLREPDLGFAWTAYRW 850

Query: 887 SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
           + G +  EV+  + +  G  +R+ ++L + L Q+  AA     V   +    A + LRRG
Sbjct: 851 ASGHSLDEVLLESQMTAGDFVRAVKQLIDLLGQVADAAPEGSRVR--QTAGKAMDGLRRG 908

Query: 947 IMFSNSL 953
           ++  +S+
Sbjct: 909 VVAYSSV 915


>gi|330468496|ref|YP_004406239.1| dsh domain-containing protein [Verrucosispora maris AB-18-032]
 gi|328811467|gb|AEB45639.1| dsh domain protein [Verrucosispora maris AB-18-032]
          Length = 925

 Score =  354 bits (909), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 291/929 (31%), Positives = 464/929 (49%), Gaps = 104/929 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD--------- 118
           E      F+LD FQR +   LER   VLV A T AGKT V E+A+ +A R          
Sbjct: 26  EFTSDIGFDLDDFQREACQALERGSGVLVCAPTGAGKTVVGEFAVHLALRGTPGQPVPTD 85

Query: 119 --KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLY 174
             +++  YT+P+KALSNQKY +L   +    VGL+TGD  ++ +A  +VMTTE+LR MLY
Sbjct: 86  GARRKCFYTTPIKALSNQKYHDLVDRYGAAQVGLLTGDNAINGDAPVVVMTTEVLRNMLY 145

Query: 175 RGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWIC 234
            GS  L+ +A+V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +FA+W+ 
Sbjct: 146 AGSATLEGLAYVVMDEVHYLADRFRGGVWEEVIIHLPASVTLVSLSATVSNAEEFADWLI 205

Query: 235 HLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL----QDTFLKQ 290
            +  +   VV ++ RP PL  ++  VG     L  D     + D   +L    ++T  + 
Sbjct: 206 TVRGETT-VVVSEHRPVPLWQHML-VGKRMFDLFHDAAAARKHDVHPELLRYTRETVRRL 263

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE---QHAM 347
            +G     G+A+G   + G    G     IV+ +      P I+F FSR  C    Q  +
Sbjct: 264 DLG----EGRAAGWGGRRGPRWRGPSRPDIVERLDREGLLPAILFIFSRAGCAAAVQQCL 319

Query: 348 SMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
           + + L   + EE+  + +V ++ V  +  ED ++      L  L+RG+A HH+G+LPV K
Sbjct: 320 A-AGLRLTSPEERAEIRRVVESRVTAIPGEDLSVLGYWEWLDGLERGLASHHAGMLPVFK 378

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LF  GLVKA+FATET A+G+NMPA+ VV   + K++G++H  +  GEY Q++GRA
Sbjct: 379 EVVEELFVRGLVKAVFATETLALGINMPARCVVLERLVKYNGEAHVDLTPGEYTQLTGRA 438

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +++   + +   +  +   +  PL S+FR SY   +NL+  + G   A 
Sbjct: 439 GRRGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVG-SVGADPAR 497

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEE--EAASLDA-SGEAEVAEYHKLKLDIAQLEKK 584
            ++++SF QFQ ++++  + ++V +  E  EA  ++A     +  EY  L++ IA  E+ 
Sbjct: 498 ALLESSFAQFQADRSVVGLARQVQRNTETIEAYGVEAECHHGDFDEYFALRVSIADRERA 557

Query: 585 LMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP----- 634
           L  +     R      L  L  G +I+V   G   G  VV++    P+AG  + P     
Sbjct: 558 LARQGQSQRRAAAVAALERLRVGDVIRV-PSGRRAGLAVVLD----PAAGGFSEPRPLVL 612

Query: 635 --SRGGGYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQ----ELESRFPQGL 687
              R  G I P      +  L++IR  VP    P +      LA Q     L+    +G 
Sbjct: 613 TQDRWAGRISPGDFTTPAEVLARIR--VPKHFNPRNPAARRDLAAQVSGTGLDRHSRRGA 670

Query: 688 PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQ 746
                 +D            +Q+ +L  +L  HP +   + E   R  +R+  +  + ++
Sbjct: 671 RGRQSGED------------HQLTQLRAELRRHPCHACPEREEHARWAERRRRLERDTEE 718

Query: 747 LKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
           L+ ++  R   + +  D +     +L   G++ A+G V   GR    I T  +LLV E +
Sbjct: 719 LRERVAGRTGSLARTFDRIVA---LLTTRGYLTAEGEVTDAGRMLGRIWTEADLLVAECL 775

Query: 805 FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK-PLQQLQESARKIAEIQNECKL 863
             G ++ L   ++AA  S  + V ++   ++ R  L + P+ +  ++  K+         
Sbjct: 776 RRGVWDGLSPAELAAAVS--VVVFEARRDVDERASLPRGPVAEAVDATLKLWS------- 826

Query: 864 EVNVDEYVES---TVRPFLMDV--IYCWSKGATFAEVIQMTDIFEGSI-----IRSARRL 913
           E+  DE       T  P L     IY W++G   A+V+      +G +     +R AR++
Sbjct: 827 EIEADEAARGLTVTREPDLGFAWPIYRWARGEALAKVLASGHELDGEMPAGDFVRWARQV 886

Query: 914 DEFLNQ----------LRAAA-QAVGEVN 931
            + L Q          LRA A QA+G VN
Sbjct: 887 VDLLGQVADSGGASAELRATARQAIGVVN 915


>gi|428219595|ref|YP_007104060.1| DSH domain-containing protein [Pseudanabaena sp. PCC 7367]
 gi|427991377|gb|AFY71632.1| DSH domain protein [Pseudanabaena sp. PCC 7367]
          Length = 906

 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 293/925 (31%), Positives = 461/925 (49%), Gaps = 125/925 (13%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++ + + FELD FQ  ++A LE  +SV+V+A T +GKT + EY I  A   K++V YT+P
Sbjct: 5   DLNQLFPFELDQFQLEAIAALEAGKSVVVAAPTGSGKTLIGEYVIYQALATKRQVFYTTP 64

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLY----------- 174
           LKALSNQK R+  ++F   +VGL+TGDV+++ +A  LVMTTEI R MLY           
Sbjct: 65  LKALSNQKLRDFREQFGADNVGLLTGDVSINRHAPVLVMTTEIFRNMLYGINVSDPVAMA 124

Query: 175 -------RGSE-------------VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
                   G+E              L  +A V+ DE HYM DR+RG VWEESII+ PP+I
Sbjct: 125 VNDAIEAEGAESISPPEPAVNLKDALANLAAVVLDECHYMNDRQRGTVWEESIIYCPPSI 184

Query: 215 KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
           ++V LSAT++N+ Q  +WI  +H  P  ++ +D+RP PLQ +       GL  ++D+K Q
Sbjct: 185 QLVALSATIANSAQLTDWINQVHG-PTALISSDYRPVPLQFHF--CNNKGLAPLLDQKRQ 241

Query: 275 FREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIV 334
                  KL    LK     R +  +  GR  +   G        +V  + +R+  P I 
Sbjct: 242 -------KLNPK-LKGDRNRRSQQFRGRGRRNEPSLGF-------VVSQLAQRQMLPAIY 286

Query: 335 FSFSRRECEQHAMSMSKLDF-NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
           F FSRR C+     M K+   N  E     EQ+  +A    N +      ++     L +
Sbjct: 287 FIFSRRGCDLAVTEMDKVPLVNADEAARLKEQI--DAFLSANPDAGRAGQVQA----LYK 340

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           GIA HH+G+LP  K LVE LFQ+GL+K +FATET A G+NMPA+T V +++ K   + HR
Sbjct: 341 GIAAHHAGILPAWKGLVEELFQQGLIKVVFATETLAAGINMPARTTVISSLSKRTDNGHR 400

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA---PLVSTFRLSY 510
            + + E++QM+GRAGRRG D  G  + +   Q      KD      A   PL+S F  SY
Sbjct: 401 LLNASEFLQMAGRAGRRGMDRVGYVVTV---QTRFEGAKDAAFLATADADPLMSHFTPSY 457

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQF-------QYEKALPDIGKKVSKLEEEAASLDAS 563
             +LNL+     +  A+ +I+ SF ++         E+ L D   +++KLE+E A +D S
Sbjct: 458 GMVLNLLQTHTLE-KAQELIERSFSRYLSDIVLAPQEQVLADKETRIAKLEQELAGVDIS 516

Query: 564 GEAEVAEYHKL-----------KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGT 612
               + +Y KL           K+ I Q E++ +SE+      L Y+ SG + +V+    
Sbjct: 517 ---LLKDYEKLRDRLREAKRLRKILIQQAEEQRLSELA---TYLPYVLSGTIARVKISKK 570

Query: 613 DWGWGVVVNVVKKPSAG------VGTLPSRG--GGY--IVPVQLPLISTLSKI-RLSVPP 661
                V+  V K P AG        T  +R     Y  IV V  P+  T + +  + +PP
Sbjct: 571 VTMAAVI--VAKVPGAGQFPWYICLTEDNRFLVASYKDIVLVGEPIAETDATLAAIEIPP 628

Query: 662 DLRPLDARQSILLAVQELESRFPQ-GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAH 720
           +L        I+   Q L+       +  L P  +M    PEV+     +  +E +L  H
Sbjct: 629 EL--------IVKPGQTLKGDEKSLAIAHLIPNLEMPEYPPEVLQQQAAVLAIEARLNEH 680

Query: 721 PLNKSQDENQIRCFQRKA-EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD 779
           P N+  D   I    RK+ E+N E+ + +  + + + +K  DE      +L+   +++  
Sbjct: 681 PANQYGDVGSISKKLRKSDELNREL-EFQRNVLNQRRRKQWDEFMALVEILRSFDYLENL 739

Query: 780 GVVQLKGRAACLIDTGD-ELLVTELMFNGTFNDLDHHQVAALASCFIPVD-KSSEQINLR 837
                   AA L   GD EL +   M +G  ++LD H +A + +  +  + +S   +NL 
Sbjct: 740 KPTAAGQAAAAL--RGDNELWLALAMRSGELDELDPHHLATVCAALVTENSRSDTWVNLG 797

Query: 838 ME--LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
           +   + + L +L +  R++  +Q   K  V +  +++      L+ +I  W+ G  + E+
Sbjct: 798 ISPTVEEALTELHDIRRQLFRMQR--KQMVAIPIWLDYD----LVGLIEQWALGMEWTEL 851

Query: 896 IQMTDIFEGSIIRSARRLDEFLNQL 920
              T + EG ++R ARR  + L+Q+
Sbjct: 852 CSHTSLDEGDVVRIARRTLDLLSQI 876


>gi|344998672|ref|YP_004801526.1| DSH domain-containing protein [Streptomyces sp. SirexAA-E]
 gi|344314298|gb|AEN08986.1| DSH domain protein [Streptomyces sp. SirexAA-E]
          Length = 943

 Score =  353 bits (905), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 279/952 (29%), Positives = 460/952 (48%), Gaps = 100/952 (10%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G     Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+
Sbjct: 26  GPFRDLYDFPLDPFQIEACKALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTT 85

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 86  PIKALSNQKFADLARRYGADKVGLLTGDNSVNADAPVVVMTTEVLRNMLYAGSQALVGLG 145

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 146 YVVMDEVHYLSDRFRGAVWEEVIIHLPASVTLVSLSATVSNAEEFGDWLDTV-RGDTQVI 204

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKLQDTFLKQKIGGR 295
            ++ RP PL  +V  + G  +Y + +E+          RE N   V+L     ++    R
Sbjct: 205 VSEHRPVPLWQHV--MAGRRMYDLFEEETDHGGRGTGRREVNPDLVRLARMENQRGYNPR 262

Query: 296 -RENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECE---QHA 346
            R  GK      +       S I+     +++  +      P I F FSR  CE   Q  
Sbjct: 263 ERRRGKMVREADRERERRARSRIWTPSRPEVIDRLDAEGLLPAITFIFSRAACEAAVQQC 322

Query: 347 MSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVI 406
           ++ + L  N ++++  V ++ +     +  ED ++      L  L+RGIA HH+G+LP  
Sbjct: 323 LA-AGLRLNDEDKRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGMLPTF 381

Query: 407 KELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGR 466
           KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GR
Sbjct: 382 KEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGR 441

Query: 467 AGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTA 526
           AGRRG D  G  +++    M+   L  +   +  PL S+FR SY   +NL+ +  G+  +
Sbjct: 442 AGRRGIDVEGHAVVLWQRGMDPTGLAGLAGTRTYPLRSSFRPSYNMAVNLVHQF-GRHRS 500

Query: 527 EHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQ 580
             +++ SF QFQ ++++  I ++V + EE    L+   E       +  EY +L+ D+  
Sbjct: 501 RELLETSFAQFQADRSVVGISRQVQRNEE---GLEGYREGMTCHLGDFEEYARLRRDLKD 557

Query: 581 LEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPS 635
            E +L  +     RV     L  L  G +I V  G         + +V  P    G    
Sbjct: 558 RETELAKQGAAQRRVAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAGRTNG 612

Query: 636 RGGGYIVPVQLPLIST-------LSKI----------RLSVPPDLRPLDARQSILLAVQE 678
             G        PL+ T       L++I          R+ VP    P   +       ++
Sbjct: 613 HRGVEYHDGPRPLVLTAERQVKRLAQIDFPVPVEALERMRVPKSFNPRSPQSR-----RD 667

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRK 737
           L S        ++P +  K       D   +I  L  +L AHP +   + E+  R  +R 
Sbjct: 668 LASALRSKAGHIDPGRHRKQRSAAADD--REIARLRTELRAHPCHGCDEREDHARWAERY 725

Query: 738 AEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTG 795
             +  + +QL+ ++  R + I +  D +     +L +L ++  D V     R A L    
Sbjct: 726 HRLQRDTRQLEKRIEGRTNTIARTFDRIVA---LLTELDYLRGDEVTGNGRRLARLYGEL 782

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFI--------------PVDKSSEQINLRMELA 841
           D LL +E + +G +  L+  ++AA  S  +              P   +   +   + + 
Sbjct: 783 D-LLASECLRDGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVAMGEMVRIW 841

Query: 842 KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDI 901
             L  L+E   KI++ +   + E ++               +Y W+ G T  EV++  ++
Sbjct: 842 GRLDALEEDF-KISQTEGVGQREPDLG----------FAWAVYMWASGRTLDEVLREAEM 890

Query: 902 FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
             G  +R  +++ + L Q+ AAA   G   + K    A +++ RG++  +SL
Sbjct: 891 PAGDFVRWCKQVIDVLGQIAAAAPREGGSTVAKNAHKAVDAVLRGVVAYSSL 942


>gi|398788653|ref|ZP_10550789.1| ATP-dependent RNA helicase [Streptomyces auratus AGR0001]
 gi|396991972|gb|EJJ03091.1| ATP-dependent RNA helicase [Streptomyces auratus AGR0001]
          Length = 938

 Score =  352 bits (904), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 281/926 (30%), Positives = 454/926 (49%), Gaps = 65/926 (7%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQVEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTTPIKALS 91

Query: 133 NQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY++L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYQDLVKRYGAGKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLVGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQ----FREDN-----FVKLQD---TFLKQKIGGRREN 298
            PL  +V  + G  +Y + +E++      RE N       ++++   TF + K  GR   
Sbjct: 211 VPLWQHV--LAGRRIYDLFEERDGQSGGRREVNPDLERLARMENSRPTFGRDKRRGRTMR 268

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNT 356
                R  +  S        +++  +      P I F FSR  CE        S L  N 
Sbjct: 269 EADRERERRQRSRIWTPSRPEVIDRLDNEGLLPAITFIFSRAACEAAVQQCLYSGLRLND 328

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
           QE ++ V ++ +     + ++D ++      L  L+RGIA HH+G+LP  KE+VE LF +
Sbjct: 329 QEGREQVRRIVEARTAGIADDDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVEELFVK 388

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G
Sbjct: 389 GLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDIEG 448

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             +++    M+   +  +   +  PL S+F+ SY   +NL+S+  G   +  +++ SF Q
Sbjct: 449 HAVVLWQRGMDPGAVAGLAGTRTYPLRSSFKPSYNMAVNLVSQF-GHHRSRELLEMSFAQ 507

Query: 537 FQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSE----- 588
           FQ +K++  I ++V K EE  A    S    +    EY +L+ ++   E +L  +     
Sbjct: 508 FQADKSVVGISRQVQKNEEGLAGYRGSMTCHLGDFEEYSRLRRELKDRETELARQGAAQR 567

Query: 589 ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPL 648
                  L  L  G +I V  G         + +V  P    G      G        PL
Sbjct: 568 RVAAAAALEKLKPGDVIHVPTGKF-----AGLALVLDPGMPSGRTNGHRGFDAQDGPRPL 622

Query: 649 IST-------LSKIRLSVPPDL-------RPLDARQSILLAVQELESRFPQGLPKLNPVK 694
           + T       L+ I   VP +        +  +AR     + ++L S        L P +
Sbjct: 623 VLTAERQVKRLASIDFPVPVEALDRMRIPKSFNARSP--QSRRDLASALRTKAGHLVPSR 680

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM-- 751
             K       D   +I  L   L AHP +   + E+  R  +R   +  + +QL+ ++  
Sbjct: 681 HRKPRSAAADD--REITRLRTALRAHPCHGCDEREDHARWAERYHRLLRDTRQLERRIEG 738

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           R + I +  D +     +L +LG+++ D V     R A L    D LL +E +  G +  
Sbjct: 739 RTNTIARTFDRI---CALLTELGYLEGDSVTDEGRRLARLYGELD-LLASECLREGVWEG 794

Query: 812 LDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIAEIQN-ECKLEVNVDE 869
           L   ++AA AS  +    ++ + +  ++   +  + L E  R    +   E    +N  E
Sbjct: 795 LGPAELAACASALVYEARQADDAVAPKLPAGQAREALGEMVRIWGRLDALEEDHRINQAE 854

Query: 870 YVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
            V     P L      Y W+ G    EV++  ++  G  +R  ++L + L Q+ AAA   
Sbjct: 855 GV-GQREPDLGFAWAAYRWASGFGLDEVLRDAEMPAGDFVRWCKQLIDVLGQIAAAAPPE 913

Query: 928 GEVNLEKKFAAASESLRRGIMFSNSL 953
           G V    +   A + + RG++  +S+
Sbjct: 914 GTVARTAR--RAMDGVLRGVVAYSSV 937


>gi|365824846|ref|ZP_09366806.1| hypothetical protein HMPREF0045_00442 [Actinomyces graevenitzii
           C83]
 gi|365259034|gb|EHM89029.1| hypothetical protein HMPREF0045_00442 [Actinomyces graevenitzii
           C83]
          Length = 916

 Score =  352 bits (904), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 265/887 (29%), Positives = 449/887 (50%), Gaps = 65/887 (7%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LD FQ      LE  +SVLV+A T AGKT V E+A+ +     ++  YT+P+KALS
Sbjct: 30  YDFPLDDFQLEGCRALEEGKSVLVAAPTGAGKTVVGEFAVYLGLMSGRKTFYTTPIKALS 89

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L   +    VGL+TGD +++P+A  +VMTTE+LR MLY GS  L+ +A+V+ DE
Sbjct: 90  NQKYLDLVTRYGHDVVGLLTGDNSINPHAPIVVMTTEVLRNMLYAGSADLENLAYVVMDE 149

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEESII L  ++++V LSAT+SNA +F +W+  +    C V+ ++ RP
Sbjct: 150 VHYLADRFRGPVWEESIIHLEASVQVVALSATVSNAEEFGQWLEEVRGH-CQVIVSEHRP 208

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS 310
            PL+ ++    G  L+ +   ++    D+   +           RR  G    R  + G 
Sbjct: 209 VPLKQFMMV--GRKLFPLYSHEDT---DSGAVINRDLTSALHRARRAQG-GYKRPPRPGR 262

Query: 311 GSGGSDIFK-----IVKMIMERKFQPVIVFSFSRRECEQ---HAMSMSKLDFNTQEEKDT 362
                 +       +++ + +    P IVF FSR  CE+    AM+ + ++  T EE   
Sbjct: 263 FPAPPSLTPPRRSVVIEALHKAHMLPAIVFVFSRNGCEEAVSQAMN-AGINLTTAEEAQQ 321

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
           + ++ Q     L+  D            L+ GIA HH+G+L   KE VE LF +GLVK +
Sbjct: 322 IRRIIQANTAQLSGADLAAVGFYSWASALEHGIAAHHAGMLTAFKETVEQLFAQGLVKVV 381

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           +ATET A+G+NMPA+TVV  +++KWDG +H  +  G+Y Q++GRAGRRG D  G  +++ 
Sbjct: 382 YATETLALGVNMPARTVVLESLRKWDGQAHNQLTPGQYTQLTGRAGRRGIDSIGYAVVLG 441

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
             Q+E  T+  +   +  PL S F  +Y   +NL+SR      A  ++++SF QFQ ++A
Sbjct: 442 AGQVEAQTVASLASKRSYPLKSAFTPNYNMAVNLLSRTNYN-VARDILESSFAQFQADRA 500

Query: 543 LPDIGKKVSKLEEEAASLDA---SGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
           + ++     K   +A +L +       +   Y +L LDI+  +K+L   I+  E    YL
Sbjct: 501 VVELAASARKARAKADNLSSQMRCSHGDYISYAQLLLDISSGDKELKQLISADE--TRYL 558

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRLSV 659
            S ++  ++ G       V++  V + S     L  R     +P+ L ++   +K+++  
Sbjct: 559 TS-QMRALKRG------DVILLRVGRRSRHAVVLERRQDAAGLPL-LSIVDETAKVQVLT 610

Query: 660 PPDLR-------------PLDARQSILLAVQELESRFPQGLP--KLNPVKDMKIEDPEVV 704
           P +L+              + AR     A+++  +R  Q +    L P K    +     
Sbjct: 611 PLELKGPAVVLGKMQLGHSVGARNHS--ALKKTAARLSQMVAGGDLKPAKLRAKQSVRTK 668

Query: 705 DLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK-AEVNHEIQQLKSKM--RDSQIQKFRD 761
            L  ++++L  +L  HP +      +     RK A+   E  ++ +++  R S I +  +
Sbjct: 669 QLRVRLDQLRSQLREHPCHSCPHREEHAVVGRKWAKAQREADRISARVHARTSSIARTFE 728

Query: 762 ELKNRSRVLKKLGHI--DADGV-VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            +    +VL+  G++  +AD +    +G+    I    +LLV + + NG + +L   Q+A
Sbjct: 729 AV---CKVLEHFGYLEREADQLRPTARGKLLARIYAERDLLVAQCLVNGVWANLSPAQLA 785

Query: 819 ALA-SCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP 877
            +A SC       S+       L K L++  + A +I  +Q     E+ V+       + 
Sbjct: 786 GVASSCVFEPRIGSKVAFSDGTLGKALRKTTDQAERI-HVQ-----ELAVELARSGDAQW 839

Query: 878 FLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
            L + I  W  GA   +V+ ++++  G  +R  ++L + + Q+R+ A
Sbjct: 840 DLAEAINDWVNGADLKDVLALSEMGAGDFVRWCKQLLDLVRQMRSLA 886


>gi|269795155|ref|YP_003314610.1| superfamily II RNA helicase [Sanguibacter keddieii DSM 10542]
 gi|269097340|gb|ACZ21776.1| superfamily II RNA helicase [Sanguibacter keddieii DSM 10542]
          Length = 972

 Score =  352 bits (903), Expect = 6e-94,   Method: Compositional matrix adjust.
 Identities = 286/967 (29%), Positives = 455/967 (47%), Gaps = 128/967 (13%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
           +T  F+LD FQ  + A LER   VLV+A T AGKT V E+AI +A    ++  YT+P+KA
Sbjct: 50  QTLDFDLDDFQLEACAALERGHGVLVAAPTGAGKTIVGEFAIHLAVTGGRKAFYTTPIKA 109

Query: 131 LSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQKY +L   +  + VGL+TGD T++  A  +VMTTE+LR MLY  S  L  + +V+ 
Sbjct: 110 LSNQKYADLVARYGAEHVGLLTGDTTINGEAPVVVMTTEVLRNMLYAASPTLDNLGFVVM 169

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ DR RG VWEE II L   +++V LSAT+SNA +F +W+  + +    VV ++ 
Sbjct: 170 DEVHYLADRFRGSVWEEVIIHLAADVQLVSLSATVSNAEEFGDWL-EMVRGDTTVVVSEH 228

Query: 249 RPTPLQHYVF---------------------------PVGGSGLYLVVDEKEQFREDNFV 281
           RP PL  +V                            P     L  ++ + + FR     
Sbjct: 229 RPVPLTQHVAAARRGAAPGGLFDLYAHTVDPTAPGPNPPINPDLLALMRQGDSFRGGGGR 288

Query: 282 KLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRE 341
                  + + GG     + S R + G +G  G   F +V  + + +  P I F FSR  
Sbjct: 289 GRGYRSARGQ-GGPGGRSRDSARGSAGTTGRRGPARFTVVDELEQARLLPAIYFIFSRAG 347

Query: 342 CEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHH 399
           CE        S L   T E++ T+  + +     +  ED  +      L  L RGIA HH
Sbjct: 348 CEGAVAQCVGSGLRLTTPEQELTIRGIVEARCANIPSEDLAVLGYWGWLDALTRGIAAHH 407

Query: 400 SGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGE 459
           +G+LP+ KE VE LF  GLVK +FATET A+G+NMPA++VV   + KWDG SH  +  GE
Sbjct: 408 AGMLPLFKETVEELFSAGLVKIVFATETLALGINMPARSVVLEKLVKWDGSSHVDLTPGE 467

Query: 460 YIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSR 519
           Y Q++GRAGRRG D  G  +++    ++   L  +   +  PL S+F  +Y   +NL+S+
Sbjct: 468 YTQLTGRAGRRGIDVEGHAVVVDHPGLDPVVLAGLASKRLYPLKSSFAPTYNMAVNLVSQ 527

Query: 520 AEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHK 573
             G+  A  +++ SF QFQ ++ +  + K+ +   E   +LD   EA      +  EY +
Sbjct: 528 V-GRERAREILETSFAQFQADRGVVGLAKQAAASSE---ALDGYAEAMLCEQGDFREYMR 583

Query: 574 LKLDIAQLEKKLMSEIT---RPE--RVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSA 628
           L+  ++  E +L    T   R E  R L  L  G L+++   G   G+ +V++       
Sbjct: 584 LRKALSAREAELSKRATNERRSEVVRALESLRRGDLVEI-PSGRRAGYALVLD------- 635

Query: 629 GVGTLPSRGGGYIVPVQLPLISTLSKIRLS---VPPDLRPLDARQSILLAVQELESRFPQ 685
                P   GG+  P    L +     RL+   VP  LR +             E R P+
Sbjct: 636 -----PGSDGGFDGPRPTILSTDRQVKRLTVADVPQGLRVVG------------EVRIPK 678

Query: 686 GLPKLNP------VKDMKIEDPEVVDLVN------------------QIEELEHKLFAHP 721
                NP      V  M        D  +                  ++  ++  L AHP
Sbjct: 679 TFNARNPGSRRDLVSSMNTRLGAFADTADGRVPKRSGSTRRGAGDDAEVARIQAALRAHP 738

Query: 722 LNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDA 778
            +   D E   R   R   ++ E + L  ++  R   I K  D + +   VL+ L +++ 
Sbjct: 739 CHSCPDRETHARWALRWESLDKEHKALMRRIEGRTGSIAKVFDRICD---VLRTLEYLER 795

Query: 779 DG----VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV---DKSS 831
           D     VV   G +   +    +LL+ E +  G ++DLD   +AA  S  +     D   
Sbjct: 796 DEHGALVVTRAGESLKRLYAESDLLLAECLRRGVWDDLDPAGLAAAVSTVVYSARRDDRE 855

Query: 832 EQINL----RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
           E+ ++       LA+ L +       + ++++  +LE          +   L++ ++ W+
Sbjct: 856 EEPHVPGGPDGRLARALDETVRIWSALDDLEDAHRLEAT------GPLDMGLVEAMHRWA 909

Query: 888 KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL-RAAAQAVGEVNLEKKFAAASESLRRG 946
            G +   V++ TD+  G  +R  +++ + L QL +A+ Q    V  +K    A ++LRRG
Sbjct: 910 SGRSLDVVLKGTDLAAGDFVRWCKQVIDVLGQLTKASPQDHVRVTADK----AIDALRRG 965

Query: 947 IMFSNSL 953
           ++  +S+
Sbjct: 966 VVAYSSV 972


>gi|443628832|ref|ZP_21113172.1| putative Helicase [Streptomyces viridochromogenes Tue57]
 gi|443337703|gb|ELS52005.1| putative Helicase [Streptomyces viridochromogenes Tue57]
          Length = 950

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 271/941 (28%), Positives = 451/941 (47%), Gaps = 98/941 (10%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 47  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALMQGRKCFYTTPIKALS 106

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + + D  VGL+TGD +++P+A+ +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 107 NQKYADLCRRYGDGMVGLLTGDNSINPDAAVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  +L      +     R  G+A     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEGEGHKKAVNPDLTRLARMEATRPSYQDRRRGRAMREADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N +E +
Sbjct: 284 ERERRQRSRVWTPGRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEAR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           D V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 DKVRALVEERTASIPREDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGMSPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE  A    S    +    EY +L+ ++   E +L  +     R   
Sbjct: 523 KSVVGISRQVQRNEEGLAGYKESMTCHLGDFEEYARLRRELKDRENELARQGAAQRRAEA 582

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY------------ 640
              L  L  G +I V  G    G  +V++         G    R  G+            
Sbjct: 583 AVALEKLKPGDVIHVPTGKYA-GLALVLD--------PGLPAGRSNGHRGFEHHDGPRPL 633

Query: 641 ----------IVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                     +  +  P+ +  L ++R+    + R   +R+ +  A++      P     
Sbjct: 634 VLTAERQVKRLASIDFPVPVEALERMRIPKSFNPRSPQSRRDLASALRTKAGHIP----- 688

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
             P +  K       D   +I+ L   L AHP +   D E+  R  +R   +  +  QL+
Sbjct: 689 --PERHRKRRSQAADD--REIDRLRKALRAHPCHGCSDREDHARWAERYHRLLRDTSQLE 744

Query: 749 SKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            ++  R + I +  D +     +L +L ++  D V +   R A L    D LL +E +  
Sbjct: 745 RRIEGRTNTIARTFDRIVA---LLTELDYLRGDEVTEHGKRLARLYGELD-LLASECLRE 800

Query: 807 GTFNDLDHHQVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESAR 852
             +  L   ++AA  S  +              P  K+   +   + +   L  L+E  R
Sbjct: 801 RVWEGLGPAELAACVSALVYEARVGDDAMAPKLPSGKAKAALGEMVRIWGRLDALEEDFR 860

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            I + +   + E ++                Y W+ G    EV++  ++  G  +R  ++
Sbjct: 861 -ITQTEGVGQREPDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQ 909

Query: 913 LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + + L Q+ AA+   G   + K    A ++L RG++  +S+
Sbjct: 910 VIDVLGQISAASPVEGS-TVAKSARKAVDALLRGVVAYSSV 949


>gi|221632204|ref|YP_002521425.1| putative DNA helicase [Thermomicrobium roseum DSM 5159]
 gi|221156835|gb|ACM05962.1| putative DNA helicase [Thermomicrobium roseum DSM 5159]
          Length = 948

 Score =  352 bits (902), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 278/955 (29%), Positives = 466/955 (48%), Gaps = 110/955 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F  DPFQ  ++      +SV+V+A T  GKT VAE+ +   FR   RV+YT+P+KALS
Sbjct: 24  YPFRFDPFQLEAMLAFLEGKSVMVAAPTGTGKTVVAEFGVYETFRRGARVMYTTPIKALS 83

Query: 133 NQKYRELHQEFKD-VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           NQK+R+L   + D VGL+TGDVT +P+A  +VMTTE+LR ML +    L  V  VIFDEI
Sbjct: 84  NQKFRDLRAIYGDNVGLLTGDVTENPHAPIVVMTTEVLRNMLLQTPWELDSVQCVIFDEI 143

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ D ERG  WEESII  P  I+++ LSAT+SNA + A+WI   H+    +V+T+ R  
Sbjct: 144 HYLADPERGTTWEESIILCPEHIQLICLSATVSNAQEIADWISRTHRPIQLIVHTE-RAV 202

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG-- 309
           PL  + F      L LV+D   +   D             +GG     +    + +GG  
Sbjct: 203 PLALWYF--YDRKLRLVIDHHGRQVAD----------YSNVGG-----EIRALIGRGGLT 245

Query: 310 ------SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDT- 362
                 +       ++I++ +      P I F F+RR+CE +A  ++ +  N   ++ T 
Sbjct: 246 AERRREAEEAEPPPWEIIQALAAEDMLPAIYFLFNRRDCEDYATRLAMMRVNLVRDRATR 305

Query: 363 --VEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             +  V ++ +  L  EDR L  ++ ++ L  +GI  HH+GLLP++K+LVE+LF +GL+K
Sbjct: 306 QRIAHVIESFLASLRPEDRELSQVQTIVQLAAKGIGFHHAGLLPILKQLVEVLFSQGLMK 365

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            +FAT+T A+G+NMPA+TVV   + KWDG   R +   E+ QM+GRAGRRG D+RG  ++
Sbjct: 366 VVFATDTLALGVNMPARTVVIGRMTKWDGRRRRLLTPNEFQQMAGRAGRRGMDERGNVVV 425

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
                +    +  +  G+  P+ S F + Y ++LNL     G      + + S  Q+Q  
Sbjct: 426 PYSPWISFKEVLAVATGELEPVRSAFTIRYNTVLNLWDPPRGD-RVRQLFQESLAQYQAA 484

Query: 541 KALPDIGKKVSKLEEEAASLDAS---------------------GEAEVAEYHKLKLDIA 579
           + +  + +++ ++  E  ++                          A+  E H L+ D+A
Sbjct: 485 QRVRLLEEEILQVGHELETVPRGCLLGLDGDELLYDYRNIVAQLNHAKSQERH-LEHDLA 543

Query: 580 QLEKKL----MSEITRP--ERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
           QLE  L     +  +RP   R++  +  G  +  RE     GW + +N  + P  G+  +
Sbjct: 544 QLEADLDDRPWAVPSRPVLRRLIREMAPGTPLHTRER----GWVLFLN--RLPYGGIALV 597

Query: 634 PSRGGGY---------------IVPVQLP-----LISTLSKIRLSVPPD-----LRPLDA 668
            +R G                 I PV +P     L   +S +R  V  +      R   A
Sbjct: 598 LTREGSAELLTEYRQIDYVPHGIEPVPIPEALTLLAQPVSDVRGIVSTEAFEEIWRAFAA 657

Query: 669 RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQ-- 726
           R    L    LE R  Q   +L P +  +IE+  +  +   + EL  + F HP +  Q  
Sbjct: 658 RPLPDLDAMLLEHR-RQVEARLAPERR-RIEE-RLQTIQQTLHELTQQRFRHPCHACQRR 714

Query: 727 DENQIRCFQRKAEVNHEIQQLKSKM-RD--SQIQKFRDELKNRSRVLKKLGHIDADGVVQ 783
            E+Q R  QR A +  E  +L++++ R+  ++ ++ R+ L+    VL+  G++       
Sbjct: 715 KEHQ-RNLQRIARLEQERAELEAQLGREIAAEERRVRELLRGIRNVLEHFGYLHRGYPTS 773

Query: 784 LKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQIN---LRMEL 840
                A + DT + L++ E++    F  L+   VA + S F   D+ +   N   L  +L
Sbjct: 774 KADTLADVFDT-NGLIICEMLDRDFFKGLEPADVAEVFSWF-AFDRETRFANHFTLPTKL 831

Query: 841 AKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD 900
               ++L+   +++ E++    L ++   +            +  W  GAT AE+ ++ +
Sbjct: 832 VLLRRRLESLEQEVFEVERRNGLALSTGHH------EGFYGAMRAWCNGATMAEITELIE 885

Query: 901 IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           + EG ++ +  +  + + Q+R   + +   +  +   A +E+L R  +   SL +
Sbjct: 886 LSEGDLVLTFNKSLDLMRQVREMLEKLYPDHPLRWSIATAEALARRDIIEQSLMI 940


>gi|375095518|ref|ZP_09741783.1| superfamily II RNA helicase [Saccharomonospora marina XMU15]
 gi|374656251|gb|EHR51084.1| superfamily II RNA helicase [Saccharomonospora marina XMU15]
          Length = 919

 Score =  352 bits (902), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 283/931 (30%), Positives = 461/931 (49%), Gaps = 81/931 (8%)

Query: 65  YNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIY 124
           ++GE+A    F+ D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  Y
Sbjct: 28  FSGELA----FDFDDFQLRGCEALEDGHGVLVCAPTGAGKTVVGEFAVHLALAEGRKCFY 83

Query: 125 TSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKE 182
           T+P+KALSNQKY +L   +    VGL+TGD  ++ NA  +VMTTE+LR MLY GS  L++
Sbjct: 84  TTPIKALSNQKYTDLTARYGPELVGLLTGDTAINGNAQIVVMTTEVLRNMLYAGSTTLRD 143

Query: 183 VAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCH 242
           + +V+ DEIHY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    
Sbjct: 144 LGYVVMDEIHYLADRFRGAVWEEVILHLPEYVRLVGLSATVSNAEEFGEWLIAV-RGDTT 202

Query: 243 VVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS 302
           VV  + RP PL  ++  VGG  L L   E    R+    ++    L++     R +  A 
Sbjct: 203 VVVDEHRPVPLWQHMM-VGGRLLDLFAGEH---RDSGEPRINPNLLRKVEDAARMHAPAG 258

Query: 303 GRMAKG--------GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKL 352
            R  +G                  ++V  +      P IVF FSR  C+        S L
Sbjct: 259 LRGPRGPRRGQPPRLPRYRPPSRIEVVDRLDRAGLLPAIVFIFSRAGCDAAVAQCVRSGL 318

Query: 353 DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
             NT EE + V ++       L E D  +         L++GIA HH+GLLP  KE VE 
Sbjct: 319 RLNTPEETEQVRRIVAERTAELPETDLAVLGYWEWREGLEQGIAAHHAGLLPAFKETVEE 378

Query: 413 LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
           LF +GLVKA+FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG 
Sbjct: 379 LFVQGLVKAVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGI 438

Query: 473 DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQF---TAEHV 529
           D  G  +++    ++   +  +   +  PL S+FR  Y   +NL+    GQF    A  +
Sbjct: 439 DVEGHAVVLWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAINLV----GQFGAAQAREL 494

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEK 583
           ++ SF QFQ ++++  + +++ + +E   +LD   EA      E+  Y +L+  I++ EK
Sbjct: 495 LEQSFAQFQADRSVVGLSRRIERNKE---ALDGYAEAVTGEFDELLSYLELRRKISEREK 551

Query: 584 KLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVN----VVKKPSAGVGTLP 634
            L  + +   R      L  L  G +I V   G   G  VVV+     +++P   V T  
Sbjct: 552 LLSRQNSATRRAETAQSLEKLRKGDVISV-PAGRRAGLAVVVDPGLGPMQEPRPVVVT-E 609

Query: 635 SRGGGYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPV 693
            R  G +     P  +  L ++RL    +LR    R+ I  +++E       G+ +  P 
Sbjct: 610 DRWSGPLSVTDFPAPVEPLGRMRLPKHVELRSPRTRRDIASSLRE------TGISR--PK 661

Query: 694 KDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMR 752
           +  +  D   V+   ++  L  +L AHP +  ++ E  +R  +R   ++ E  QL+ K+ 
Sbjct: 662 RQRRHSD---VNSDTELVSLRRELRAHPAHGLAEREANLRWVERYQRLSAENTQLERKVA 718

Query: 753 DSQIQKFRDELKNRSRVLKKLGHIDADGV-VQLKGRAACLIDTGDELLVTELMFNGTFND 811
            +     R   + RS +L + G++   G  V   GR    + +  +LL  E + +  +N 
Sbjct: 719 ATTHSLARAFDRIRS-LLTERGYLGEGGNEVTEHGRLLSRLYSESDLLAAECIRHRVWNG 777

Query: 812 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
           L   ++AA+ S  +   +       ++         Q++ +   ++ ++ +        +
Sbjct: 778 LTAPELAAVVSALVYEARKDSAAEPKLPSGAVPGAWQQTVKLWTDLVDDER-----RHRL 832

Query: 872 ESTVRP---FLMDVIYCWSKGATFAEVIQMTD-----IFEGSIIRSARRLDEFLNQLRAA 923
           + T  P   F   V Y W++G +   V+   D     +  G  +R +R++ + L+Q+R  
Sbjct: 833 DRTREPDAGFAWPV-YRWARGESLERVLTAADANGQELSAGDFVRWSRQVIDLLDQIR-- 889

Query: 924 AQAVG-EVNLEKKFAAASESLRRGIMFSNSL 953
              +G E  +    A A  SLRRG++ +  +
Sbjct: 890 -DVLGKEHPVGGTAAKAVRSLRRGVVAAGEV 919


>gi|229820554|ref|YP_002882080.1| DEAD/DEAH box helicase [Beutenbergia cavernae DSM 12333]
 gi|229566467|gb|ACQ80318.1| DEAD/DEAH box helicase domain protein [Beutenbergia cavernae DSM
           12333]
          Length = 933

 Score =  351 bits (901), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 273/942 (28%), Positives = 442/942 (46%), Gaps = 90/942 (9%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            ++   F+LD FQ  +   LE    VLV+A T AGKT V E+A+ +   + ++  YT+P+
Sbjct: 25  FSRELDFDLDAFQVEACEALEAGRGVLVAAPTGAGKTVVGEFAVRLGLDEGRKSFYTTPI 84

Query: 129 KALSNQKYRELHQ--EFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L +    ++VGL+TGDVT++  A  +VMTTE+LR M+Y GS  L  + +V
Sbjct: 85  KALSNQKYLDLVRVHGAENVGLLTGDVTINGEAPVVVMTTEVLRNMIYAGSPTLDGLRYV 144

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE II L   +++V LSAT+SNA +F +W+  +      VV +
Sbjct: 145 VMDEVHYLADRFRGSVWEEVIILLAADVRLVSLSATVSNAEEFGQWLETVRGDTA-VVVS 203

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           + RP PL  ++  V    L L   + +         +    L+           A  R  
Sbjct: 204 EHRPVPLWQHMM-VRNDVLDLYSSKVDPTDPGAHPPINPDILE-----------AVRRAE 251

Query: 307 KGGSGSGGSDIFK--------------------------IVKMIMERKFQPVIVFSFSRR 340
           + GSGSG     +                          +V  +      P IVF FSR 
Sbjct: 252 RTGSGSGAPHRARRGRGGRSTRDARRTGHQQVRPARRPVVVDRLDREGLLPAIVFVFSRA 311

Query: 341 ECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVH 398
            CE    ++  S +   T+EE+  + ++ +     L  ED ++         L+RG+A H
Sbjct: 312 GCEDAVAAVVGSGITLTTEEEQRRIREIVEVRCAALPAEDLDVLGFWQFARALERGVAAH 371

Query: 399 HSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSG 458
           H+GLLPV KE VE LF  GLVK +FATET A+G+NMPA++VV   + KWDG  H  + +G
Sbjct: 372 HAGLLPVFKETVEALFSAGLVKVVFATETLALGINMPARSVVLERLVKWDGREHVAVSAG 431

Query: 459 EYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMS 518
           EY Q++GRAGRRG D  G  +++     +   +  +   +  PL S+FR +Y   +NL+ 
Sbjct: 432 EYTQLTGRAGRRGIDVEGHAVVLYASGTDPVAVAGLASRRTYPLRSSFRPTYNMAVNLVL 491

Query: 519 RAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE------EAASLDASGEAEVAEYH 572
           R+ G+  A  V++ SF QFQ ++A+  + ++     E      EA + D     ++  Y 
Sbjct: 492 RS-GRAMAREVLETSFAQFQADRAVVGLARQARAHAEALEGYREAMACD---RGDIESYL 547

Query: 573 KLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
           +L+ +I   E  L  E +            R   V E  T    G VV + +   +G   
Sbjct: 548 ELRREIGDREADLSRERS----------GARRRAVVESLTGLRPGDVVEIPRGRRSGYAV 597

Query: 633 LPSRGG--GYIVPVQLPLISTLSKIRLSVPPDLRPLDARQS----ILLAVQELESRFPQG 686
           +   GG  G   P  L L+      R+S   D  P   R+S    I  +    ++R  + 
Sbjct: 598 VLDDGGTPGLDGPTPLVLMQDRQVRRISA--DEAPAGVRRSGRVRIPRSFNARDARARRD 655

Query: 687 LPK--LNPVKDMKIEDPEVVDLVN-------QIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
           L     N + + K  DP              ++  L  +L AHP +   + E+ +R   R
Sbjct: 656 LASSLRNALAEGKAGDPGGSARARSGAGDDAELARLRARLKAHPCHGCPEREDHVRWAHR 715

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG----VVQLKGRAACLI 792
              +  E   L  ++ +S+      +      +L  LG++D D     VV   GR    +
Sbjct: 716 TRGLAAEHDGLVRRI-ESRTSSIARDFDRVCEILLTLGYLDLDDDGETVVTTDGRWMRRL 774

Query: 793 DTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESAR 852
               +L++ E +  G +++LD   +AAL S  +   +S E  +       P   +  +  
Sbjct: 775 YAERDLVLAESLRAGAWSELDAPGLAALCSTIVYTSRSEETESAPRLPGGPGGAVARAVE 834

Query: 853 KIAEIQNECKLEVNVDEYVES-TVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
               I  E +          +  V P L+  ++ W+ GA  A V++  D+  G  +R  R
Sbjct: 835 ATVRIAGEIEELERERRLTPTPPVDPGLVRAVHQWANGAPLATVLESGDLAAGDFVRWCR 894

Query: 912 RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           ++ + L+Q+  AA    + ++  +   A++ + RGI+  +++
Sbjct: 895 QVVDLLDQVGGAAP---DPSMRARAREATDRVLRGIVAQSAV 933


>gi|443291320|ref|ZP_21030414.1| Helicase [Micromonospora lupini str. Lupac 08]
 gi|385885722|emb|CCH18521.1| Helicase [Micromonospora lupini str. Lupac 08]
          Length = 933

 Score =  351 bits (900), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 282/938 (30%), Positives = 460/938 (49%), Gaps = 93/938 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK-------- 119
           E A    F+LD FQR +   LER   VLV A T AGKT V E+A+ +A R +        
Sbjct: 26  EFALDLGFDLDDFQREACQSLERGSGVLVCAPTGAGKTVVGEFAVHLALRGRPDDPAAAD 85

Query: 120 --------QRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEIL 169
                   ++  YT+P+KALSNQKY +L   +  + VGL+TGD  ++ +A  +VMTTE+L
Sbjct: 86  DAATPPIRRKCFYTTPIKALSNQKYHDLVARYGAEQVGLLTGDNAINGDAPVIVMTTEVL 145

Query: 170 RGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQF 229
           R MLY GS  L+ +A+V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F
Sbjct: 146 RNMLYAGSSTLQGLAYVVMDEVHYLADRFRGGVWEEVIIHLPASVTLVSLSATVSNAEEF 205

Query: 230 AEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL----QD 285
           A+W+  +  +   VV ++ RP PL  ++  VG     L  D     + D   +L    +D
Sbjct: 206 ADWLVTVRGETA-VVVSEHRPVPLWQHML-VGKRMFDLFHDADAARKHDVHPELLRYTRD 263

Query: 286 TFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE-- 343
              + ++G  R  G  SGR      G    DI   V  +      P I+F FSR  C   
Sbjct: 264 QMRRLELGEGRSAGPGSGRRGPRWRGPMRPDI---VDRLDREGLLPAILFIFSRAGCAAA 320

Query: 344 -QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
            Q  ++ + L   + EE+  + +V ++ V  +  ED  +      L  L+RG+A HH+G+
Sbjct: 321 VQQCLA-AGLRLTSPEERAEIRRVVESRVTAIPGEDLTVLGYWEWLDGLERGLAAHHAGM 379

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LPV KE+VE LF  GLVKA+FATET A+G+NMPA+ VV   + K++G++H  +  GEY Q
Sbjct: 380 LPVFKEIVEELFVRGLVKAVFATETLALGINMPARCVVLERLVKYNGEAHVDLTPGEYTQ 439

Query: 463 MSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG 522
           ++GRAGRRG D  G  +++   + +   +  +   +  PL S+FR SY   +NL+    G
Sbjct: 440 LTGRAGRRGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVGTV-G 498

Query: 523 QFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYH-------KLK 575
              A  ++++SF QFQ ++++  + ++V +  E   +++A G AE A +H        L+
Sbjct: 499 AEPARALLESSFAQFQADRSVVGLARQVQRNTE---TIEAYG-AEAACHHGDFDGYFALR 554

Query: 576 LDIAQLEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV 630
           + IA  EK +  +     +      L  L  G +I+V  G         + VV  P+ G 
Sbjct: 555 VAIADREKAIARQGQTQRKAAAVASLERLRVGDVIRVPSGRR-----AGLAVVLDPATGG 609

Query: 631 GTLP-------SRGGGYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
              P        R  G + P      +  L++IR+    + R   AR+ +   V      
Sbjct: 610 FGEPRPLVLTQDRWAGRVSPGDFTTPAEVLARIRVPKHFNHRSPGARRDLAAEV------ 663

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVN 741
              G               +     +Q+ +L  +L  HP +   + E   R  +R+  + 
Sbjct: 664 --SGTGLDRHGGRRGGRSRQTPGEDHQLTQLRTELRNHPCHACPEREEHARWAERRRRLE 721

Query: 742 HEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            + ++L+ ++  R   + +  D +     +L   G++  DG V   GR    I T  +LL
Sbjct: 722 RDTEELRERVSGRTGSLARTFDRIVA---LLTDRGYLARDGAVTDAGRMLGRIWTEADLL 778

Query: 800 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK-PL-QQLQESARKIAEI 857
           V E +    ++ L   ++AA  S  + V ++   ++ R  L + P+   + E+ +   EI
Sbjct: 779 VAECLRRRVWDGLSPAELAAAVS--VVVFEARRDVDERASLPRGPVADAVDETLKLWGEI 836

Query: 858 QNECKLEVNVDEYVESTVRPFLMDV--IYCWSKGATFAEVIQM-----TDIFEGSIIRSA 910
           + +          + +T  P L     +Y W++G   A+V+        ++  G  +R A
Sbjct: 837 EAD-----EAARGLSATREPDLGFAWPVYRWARGEALAKVLGSGHEIDGEMPAGDFVRWA 891

Query: 911 RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           R++ + L QL  +  A  E+    + A A  ++ RG++
Sbjct: 892 RQVVDLLGQLADSGGASPELRSTARQAIA--AINRGVL 927


>gi|119716881|ref|YP_923846.1| DSH domain-containing protein [Nocardioides sp. JS614]
 gi|119537542|gb|ABL82159.1| DSH domain protein [Nocardioides sp. JS614]
          Length = 936

 Score =  350 bits (899), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 277/896 (30%), Positives = 441/896 (49%), Gaps = 62/896 (6%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LD FQ      +E    VLV+A T +GKT V E+AI +A    ++  YT+P+KALS
Sbjct: 33  YDFPLDDFQVRGCQAIEEGRGVLVAAPTGSGKTIVGEFAIHLALETGRKAFYTTPIKALS 92

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L   +    VGL+TGD  ++ +A  +VMTTE+LR MLY GS  L  + +V+ DE
Sbjct: 93  NQKYHDLVARYGPDRVGLLTGDNVVNGDAPVVVMTTEVLRNMLYAGSRTLLGLGFVVMDE 152

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F EW+  +      +V  + RP
Sbjct: 153 VHYLADRSRGAVWEEVIIHLPESVSLVSLSATVSNAEEFGEWLATVRGDTTTIV-EERRP 211

Query: 251 TPLQHYVFPVGGSGLYLV----VDEKEQFRE------DNFVKL-QDTFLKQKIGGRRENG 299
            PL  +V  VG   L L     VD    F +      D  +K+ +D +   +I  RR N 
Sbjct: 212 VPLYQHVM-VGRRLLDLFASSDVDAAAGFVKEGAPVNDELLKVARDDWASSRIKDRR-NP 269

Query: 300 KASGRMAKGGSGSGGSDIFKIVKMIMER----KFQPVIVFSFSRRECEQHAMSM--SKLD 353
           +   +  +   G+G          +++R       P IVF FSR  C+        + + 
Sbjct: 270 RGRSKPGQKNVGNGRRVWIPSRPDVIDRLDREGLLPAIVFIFSRVGCDAAVTQCLNAGVR 329

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
             T EE+DT+    + A   L  +D ++      L  L RG+A HH+G+LPV K+ VE L
Sbjct: 330 LTTPEERDTIYAYVEEACSDLPADDLHVLGYHDFLDGLTRGVAAHHAGMLPVFKQCVEEL 389

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GL K +FATET A+G+NMPA+TVV   + KW+G++H  I  GEY Q++GRAGRRG D
Sbjct: 390 FVRGLCKVVFATETLALGINMPARTVVIEKLTKWNGETHADITPGEYTQLTGRAGRRGLD 449

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++         L  +   +  PL S+FR SY   +NL+ +  G+  +  +++ S
Sbjct: 450 VEGHGVVLWQPGTNPRELAGLASTRTYPLRSSFRPSYNMAVNLVHQF-GRERSRELLEQS 508

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEIT 590
           F QFQ +KA+  + +++ K E+  A    +    +    EY  L+  I ++EK       
Sbjct: 509 FAQFQADKAVVGLARQLRKSEDALAGYRDAATCHLGDFMEYADLRRRIGEVEKGASRARR 568

Query: 591 RPER-----VLYYLGSGRLIKVREGGTDWGWGVVVN---VVKKPSAGVGTLPSRGGGYIV 642
             +R      L  L  G +I+V  G    G+ VVV+     + P   V T   R    + 
Sbjct: 569 ADQREAAIESLRALKPGDVIEVPTGKFA-GFAVVVDPGWSAEGPRPYVVTA-DRQARRLA 626

Query: 643 PVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
            +  P  ++ ++++++    + R    R+ +  A   L SR     P   P +     D 
Sbjct: 627 MIDFPTPVTAVARVKVPKTFNGRNPQMRRDLAAA---LRSRTHDLTPP-PPGRAGGRPDQ 682

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
                  +I  L  +L AHP ++  D E+  R  +R  +++ + Q LK ++ + +     
Sbjct: 683 LRTHADEEIAGLRAELKAHPCHECPDREDHARWAERYFKLDRDAQTLKRRV-EQRTNTVA 741

Query: 761 DELKNRSRVLKKLGHIDADGV-VQLKGRAACL--IDTGDELLVTELMFNGTFNDLDHHQV 817
            +      VL  LG++  DG   Q+  R + L  + +  +LL  E M +G ++ L   ++
Sbjct: 742 RQFDRVCEVLTALGYLTGDGADAQVTERGSHLRRLYSDMDLLAAESMRHGLWDALSPSEL 801

Query: 818 AALASCFI-----PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
           AA  S  +     P D SS +I        P   ++E   ++  +    +  +  D  +E
Sbjct: 802 AAALSVLVFEARRPDDASSPRI--------PGGAVREVVGEMVRLWGSLE-ALERDHKLE 852

Query: 873 STVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
              +P L    V Y W++G    +V+ ++D+  G  +R  ++L +   Q+  AA A
Sbjct: 853 FLRQPDLGFAWVAYRWAEGDDLDDVLVVSDLAAGDFVRWMKQLVDLAGQVADAAGA 908


>gi|317124910|ref|YP_004099022.1| DEAD/DEAH box helicase [Intrasporangium calvum DSM 43043]
 gi|315588998|gb|ADU48295.1| DEAD/DEAH box helicase domain protein [Intrasporangium calvum DSM
           43043]
          Length = 959

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 272/967 (28%), Positives = 463/967 (47%), Gaps = 109/967 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E A    F LD FQ  +   +E    VLV+A T AGKT V E+A+ +A +  ++  YT+P
Sbjct: 20  EFAAQLEFPLDDFQVAACRAVEEGRGVLVAAPTGAGKTVVGEFAVHLALQTGRKAFYTTP 79

Query: 128 LKALSNQKYREL--HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +L      + VGL+TGD +++  A  +VMTTE+LR M+Y GS  L+ + W
Sbjct: 80  IKALSNQKYADLVRRHGVERVGLLTGDASINGEAPVVVMTTEVLRNMMYAGSSTLEGLGW 139

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LPP + +V LSAT+SNA +F  W+  +      V+ 
Sbjct: 140 VVMDEVHYLADRFRGAVWEEVIIHLPPDVSVVSLSATVSNAEEFGAWLDEVRGDTA-VIV 198

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR---EDNFVKLQ------------------ 284
           ++ RP PL  ++  VG S   L V+E  + R    D  V+ +                  
Sbjct: 199 SEHRPVPLWQHMM-VGQSLYDLFVEETVERRGRGADEPVRAEVSVNPDLVHAIRGTEGRG 257

Query: 285 -----------------------------DTFLKQKIGGRRENGKASGRMA----KGGSG 311
                                        D +  +   G  + G   G  A    +GG  
Sbjct: 258 AWDSHWSTNGRGRSRGGRGGPGGRGATRGDDWGGRGRRGSEQRGPGGGEAARGFSRGGRP 317

Query: 312 SGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQN 369
            GG+   ++++ +      P I F FSR  CE     +  S +   T  +     ++ + 
Sbjct: 318 GGGATRAEVIERLDREGLLPAITFIFSRAGCEAAVGQLLASGMRLVTDAQGAANRRLVEE 377

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
            V  L EED  +      +  + RG A HH+G+LP  +E+VE LF +G V+A+FATET A
Sbjct: 378 RVQGLAEEDLAVLGYWDFVEGITRGFAAHHAGMLPTFREIVEELFTQGRVRAVFATETLA 437

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMN 489
           +G+NMPA+TVV   + K++G+SH  I   EY Q++GRAGRRG D  G  +++ +  ++  
Sbjct: 438 LGINMPARTVVLEKLVKFNGESHVDITPAEYTQLTGRAGRRGIDIEGHAVVLWNRGLDPE 497

Query: 490 TLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
           ++  +   +  PL S+FR +Y   +NL+ R  G+ +A  +++ SF QFQ ++A+    + 
Sbjct: 498 SVAGLASTRTYPLRSSFRPTYNMAVNLV-RQFGRDSAREILETSFAQFQADRAVVGFVRT 556

Query: 550 VSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKLMSEITRPERV-----LYYLGS 601
           V + EE  A    S      + +EY  ++ +I  +EK+     +  +R      L  L  
Sbjct: 557 VRRNEEALAGYAESMTCHLGDFSEYAAMRNEIRTIEKEGAKARSASQRAAAAVSLESLKI 616

Query: 602 GRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSKIRL-SVP 660
           G ++++  G      G+ V V+     G G  PS       P  +     L ++ L  VP
Sbjct: 617 GDIVRIPSGRYS---GLAVVVLPNRGGGRGDAPS-------PAVVTEDHHLRRLTLHDVP 666

Query: 661 PDLRPL---------DARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
             L PL         +A+     A ++L +     +P  +P +  +    +  D   +++
Sbjct: 667 APLEPLGTIRVPKHFNAKNP--KARRDLAASLRAAMPH-DPPRPRRAVPEDAAD--TRVD 721

Query: 712 ELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSR 768
           EL  +L AHP ++  D E+  R  +R   +  E + L+ K+  R + + +  D++     
Sbjct: 722 ELRRRLRAHPCHQCPDREDHARWAERWWRLQRETEGLQRKIEGRTNSVARTFDKI---CE 778

Query: 769 VLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPV 827
           +L  +G++   G  +   G     + T  +LL  E +  G +  LD   +AA+ S  I  
Sbjct: 779 LLVAMGYLGEGGEQITEHGERLRQLYTEKDLLAAECLREGVWRQLDPPSLAAVVSMLI-- 836

Query: 828 DKSSEQINLRMELAKPLQQLQESARKIAEIQNECK-LEVNVDEYVESTVRPFLMDVIYCW 886
                + +  +    P   ++E+  ++  I ++ +  E  +   +     P +   ++ W
Sbjct: 837 -HEPRREDGGLAPRWPNDDVREAHDRMLAIWSDLEDAEGALALPMTGAPDPGIAWAVHRW 895

Query: 887 SKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRG 946
           + G    EV++ T++  G  +R  +++ + L QL  A    G+  L++    AS+++ RG
Sbjct: 896 ASGRPLEEVLRGTELAAGDFVRRCKQIIDLLGQLTDA----GDRELQRVARKASDAVLRG 951

Query: 947 IMFSNSL 953
           ++ ++ L
Sbjct: 952 VVAADRL 958


>gi|256832524|ref|YP_003161251.1| DEAD/DEAH box helicase [Jonesia denitrificans DSM 20603]
 gi|256686055|gb|ACV08948.1| DEAD/DEAH box helicase domain protein [Jonesia denitrificans DSM
           20603]
          Length = 950

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 263/917 (28%), Positives = 447/917 (48%), Gaps = 47/917 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A T  F LD FQ  +   LE+ + VLV+A T AGKT V E+A+ +A +  ++  YT+P+
Sbjct: 49  FATTLDFPLDEFQHQACEHLEKGDGVLVAAPTGAGKTIVGEFAVHLALQQHRKAFYTTPI 108

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+ +L +     +VGL+TGD T++  A  +VMTTE+LR M+Y  S  L  V +V
Sbjct: 109 KALSNQKFHDLQRVHGPHNVGLLTGDATINGEAPIVVMTTEVLRNMIYAQSTTLDNVGYV 168

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           I DE+HY+ DR RG VWEE II L  ++++V LSAT+SNA +F +W+  + +    V+ +
Sbjct: 169 IMDEVHYLADRFRGAVWEEVIIHLDRSVQLVSLSATVSNAEEFGDWLAAV-RGSTAVIVS 227

Query: 247 DFRPTPLQHYVFPVG-----GSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
           + RP PL  +V   G     G  + L     +         +    L     GR    + 
Sbjct: 228 ERRPVPLWQHVITQGRSDSPGGLIDLYAHTVDPTDPGPTPPINPDLLNTMRRGRDSGPRQ 287

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEE 359
             R     SG  G   F ++  + E    P I F FSR  C         + +   T+ +
Sbjct: 288 PRRGRPQHSGRRGPPRFAVINELAEADLLPAIYFIFSRAGCNAAVEQCLATGITLTTETQ 347

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
              +  + ++ V  +  ED ++      L  L RGIA HH+G+LP+ KE+VE LF  GL+
Sbjct: 348 ARQIRIIVESRVASVPPEDLSVLGFHGWLDGLTRGIAAHHAGMLPLFKEVVEELFSRGLI 407

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K +FATET A+G+NMPA+TVV   + KW+G +H  +  GEY Q++GRAGRRG D  G  +
Sbjct: 408 KVVFATETLALGINMPARTVVLEKLVKWNGTAHVDMTPGEYTQLTGRAGRRGIDVEGHAV 467

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    ++   L  +   +  PL S+F  +Y   +NL+ R  G   A  +++ SF QFQ 
Sbjct: 468 VVDHVGLDPMALVRLASRRTYPLRSSFSPTYNMAVNLVDRF-GFAQAREILETSFAQFQA 526

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK---LKLDIAQLEKKLMSEITRPER-- 594
           ++ + D+ ++     E     + +   +  ++H+   L+  + Q E+++  + +   R  
Sbjct: 527 DRGVVDLARQAQGNSEALTGYEQAMHCDRGDFHEYMLLRERLTQRERQVSQQASTAARND 586

Query: 595 VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV-GTLP---SRGGGYIVPVQLPLIS 650
            +  L + R+  + E  +    G V+ + +    G  G  P   + GG   V     +  
Sbjct: 587 AIRALSALRVGDIAEIPSGRSTGYVLVLDRGKDTGFEGRRPFVLTEGGKTRVLTAADVPH 646

Query: 651 TLSKI-RLSVPPDL---RPLDARQSILLAVQELESRFPQGLPKLNPVKDM---KIEDPEV 703
            L+ +  + + P L   RP D R     A Q+       G     P ++    K      
Sbjct: 647 GLTHVGSMRLDPRLNTRRPSDRRA----ATQQFRDVLRHGDMTPAPTREYGGRKRRSDAG 702

Query: 704 VDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFR 760
            D +  I  L  +L  HP +   D ++  R  +R   +  E + L +++  +   I K  
Sbjct: 703 GDRL--IASLRQELRDHPCHACPDRDDHARWGERWLTLRREHEGLLARIDRKTGSIAKVF 760

Query: 761 DELKNRSRVLKKLGHIDADG---VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           D++    RVL + G+++ +G   VV  +GR    I   ++LL+ E + +G +  LD  Q+
Sbjct: 761 DKI---CRVLDQYGYVERNGDHYVVTEQGRTLQRIYAENDLLIAECLTHGVWKGLDAAQL 817

Query: 818 AALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE-CKLEVNVDEYVESTVR 876
           A   S  +   +  E     +    P  +L  S  K+A +     +LE ++       + 
Sbjct: 818 AGAVSAAVYQARGEEHAEPSIP-GGPTGKLGGSIEKMAAMWGTLTELEDSLGLEETGDLD 876

Query: 877 PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
             L+  I+ W++G +   V+  +++  G  +R A+++ + L+ +   A    +  + +  
Sbjct: 877 AGLVWAIHAWTRGRSLDAVLDQSELTAGDFVRWAKQILDALDHI---AHVAPDEAVAQTA 933

Query: 937 AAASESLRRGIMFSNSL 953
             A +S+RRG++  +S+
Sbjct: 934 RQAIDSIRRGVVDYSSV 950


>gi|294628464|ref|ZP_06707024.1| ATP-dependent RNA helicase [Streptomyces sp. e14]
 gi|292831797|gb|EFF90146.1| ATP-dependent RNA helicase [Streptomyces sp. e14]
          Length = 944

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 277/935 (29%), Positives = 448/935 (47%), Gaps = 86/935 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 41  YDFGLDPFQIEACQALEEGKGVLVAAPTGSGKTIVGEFAVHLALQQGRKCFYTTPIKALS 100

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +L+ +A  +VMTTE+LR MLY GS+ L+ + +V+ DE
Sbjct: 101 NQKYSDLCRRYGSGKVGLLTGDNSLNSDAPVVVMTTEVLRNMLYAGSQTLRGLGYVVMDE 160

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 161 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 219

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  ++      +     R  G+A     +
Sbjct: 220 VPLFQHVL--AGRRMYDLFEEGEGRKKAVNPDLTRMARMEASRPSYQDRRRGRAMREADR 277

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S I+     ++++ +      P I F FSR  CE        + L  N +E +
Sbjct: 278 ERERRQRSRIWTPSRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEAR 337

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           D V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 338 DEVRALVEERTAAIPREDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 397

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 398 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 457

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M  + L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 458 LWQRGMNPDHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 516

Query: 541 KALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE  A    S      +  EY +L+ ++   E +L  +     R   
Sbjct: 517 KSVVGISRQVQRNEEGLAGYKESMTCHLGDFGEYMRLRRELKDRETELARQGAAQRRAEA 576

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST- 651
              L  L  G +I V  G         + +V  P    G      G   V    PL+ T 
Sbjct: 577 AVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGLEHVDGPRPLVLTA 631

Query: 652 ------LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN----------PVKD 695
                 L+ I   VP  + PL+ R  I    +    R PQ    L           P + 
Sbjct: 632 ERQVKRLASIDFPVP--VEPLE-RMRI---PKSFNPRSPQSRRDLASALRTKAGHIPPER 685

Query: 696 MKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--R 752
            +    +  D   +I  L   L AHP +   D E+  R  +R   +  + +QL+ ++  R
Sbjct: 686 ARKRRSQAAD-DREIARLRTALRAHPCHGCDDREDHARWAERYHRLQRDTRQLEHRIEGR 744

Query: 753 DSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
            + I +  D +     +L +L ++  D V +   R A L    D LL +E +    +  L
Sbjct: 745 TNTIARTFDRIVA---LLTELDYLRGDEVTEHGKRLARLYGELD-LLASECLRERVWEGL 800

Query: 813 DHHQVAALASCF--------------IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
              ++AA  S                +P  K+   +   + +   L  L+E  R I++ +
Sbjct: 801 GPAELAACVSALVYEARVSDDAMAPKVPSGKAKAALGETVRIWGRLDALEEEFR-ISQTE 859

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
              + E ++                Y W  G    EV++  ++  G  +R  +++ + L 
Sbjct: 860 GVGQREPDLG----------FAWAAYEWVSGKGLDEVLREAEMPAGDFVRWCKQVIDVLG 909

Query: 919 QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           Q+ AAA       + K    A + L RG++  +S+
Sbjct: 910 QISAAAPTENS-TVAKNARKAVDGLLRGVVAYSSV 943


>gi|390566130|ref|ZP_10246630.1| DEAD/DEAH box helicase domain protein [Nitrolancetus hollandicus
           Lb]
 gi|390170623|emb|CCF85974.1| DEAD/DEAH box helicase domain protein [Nitrolancetus hollandicus
           Lb]
          Length = 956

 Score =  350 bits (898), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 283/945 (29%), Positives = 465/945 (49%), Gaps = 91/945 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
            + +  Y FELDPFQR ++       SV+V+A T  GKT VAE+ +  +FR   RV+YTS
Sbjct: 12  AQFSAYYPFELDPFQREAIDLFMDGNSVMVAAPTGTGKTVVAEFGVYESFRRGGRVMYTS 71

Query: 127 PLKALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           P+KALSNQK+R+L   + ++VGL+TGDV+ +P+A  +VMTTE+LR ML +    L  V  
Sbjct: 72  PIKALSNQKFRDLRAIYGENVGLLTGDVSENPHAPIVVMTTEVLRNMLLQTPWELDAVDC 131

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VIFDE+HY+ D ERG  WEE+II  P  ++++ LSAT+SNA + A+WI    + P  ++ 
Sbjct: 132 VIFDEVHYIADPERGTTWEEAIILCPEHVQLICLSATVSNAQEIADWISRTQR-PIRLIT 190

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
              R  PL+ Y +      L LV+D   Q   D F        +Q    RR   +   R 
Sbjct: 191 HLERAVPLELYYYL--DQELNLVIDHSGQQVAD-FPHTGGEVRRQMF--RRTLTQEQRRE 245

Query: 306 AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV-- 363
           A+          ++I++ ++ R   P I F FSRR+CE+ A  +S +     ++   V  
Sbjct: 246 AEQAE----PQPWEIIETLLGRGMLPAIYFLFSRRDCEEFAQRLSVMRLGLLKDPGAVQR 301

Query: 364 -EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKAL 422
            E V +N +  L  EDR L  +++++ L ++GI  HH+GLLP++K+LVE LF +GL++ +
Sbjct: 302 IEAVIENYLGGLRPEDRELEQVQVIVSLARKGIGFHHAGLLPILKQLVETLFGQGLMQVV 361

Query: 423 FATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMV 482
           FATET A+G+NMPA+TVV   + KWDG   R +   E+ QM+GRAGRRG D +G  I+  
Sbjct: 362 FATETLALGVNMPARTVVIGRMSKWDGRRRRPLIPNEFQQMAGRAGRRGMDIKGNVIVPY 421

Query: 483 DEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ---- 538
              +  +   D+V G+  P+ S F + Y ++LNL     G      +++ S  QFQ    
Sbjct: 422 SPWISFHETLDIVTGELEPVRSAFAIRYNTVLNLWDPPNGN-RVRQILQQSLTQFQTARR 480

Query: 539 ---YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQL---EKKLMSEI--- 589
               E  +  + +++  + +E       G+A + EYH L   +  L   E++L  +I   
Sbjct: 481 VREIEDEILQVSRRIEAIPQECLIGLEGGDALLDEYHGLGASLNALRGKERRLTRDIGSL 540

Query: 590 -----TRPERVLYYLGSGRLIKVREGGT-----DWGWGVVVNVVKKPSAGVGTLPSRGGG 639
                 RP          RL K  E GT       GW V +   +  + GVG        
Sbjct: 541 SANLDDRPWPEPGRQALRRLFKTSEPGTVVHLRAGGWAVYLG--RGANGGVGL------- 591

Query: 640 YIVPVQLPLISTLSKIRLSVPPDLRP------LDARQS------ILLAVQELESRFPQ-- 685
           ++V  ++ L+S   +I   +P  ++P      LD  +       +L++  EL+  + Q  
Sbjct: 592 FLVDHRVMLVSEYRQIDY-LPSPIQPVPIPAALDGLEKPVDDVLLLISQAELDGIWQQVR 650

Query: 686 --GLPKLNPVKD---MKIED---PEVVDLVNQIEELEHKLFAHPLNKSQDENQIR-CFQR 736
              LP L+        K+E    PE + L  +  EL+ ++  H L ++Q ++  R C +R
Sbjct: 651 ALDLPDLDAAAQEYRRKLEQQIGPERMVLEEERRELKQEI--HRLGQAQLQHPCRACPRR 708

Query: 737 KAEVNHE-----IQQLKSKMR-------DSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
           K   ++      ++Q ++ +         S+ ++ R  ++    VL +  ++        
Sbjct: 709 KEHQSYRKAILVLEQERAALEVDLGRELTSEEERIRGIIRGIRTVLHRFDYLHRGYPTAK 768

Query: 785 KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPL 844
               A + DT + L++ E++      +L   + A + S F   D+     N R  L   L
Sbjct: 769 ADTLADVFDT-NGLIICEMIDREILQNLSPAETAEVFSWF-AYDRDFRFAN-RYTLPNHL 825

Query: 845 QQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEG 904
             L+   + I   Q     E   + ++ +         +  W  GAT A+++   ++ EG
Sbjct: 826 IHLKHRLQDIE--QQVLATERRNNLFISTGHNDAFYGAMRAWCLGATMAQILDRMELSEG 883

Query: 905 SIIRSARRLDEFLNQLRAA-AQAVGEVNLEKKFAAASESLRRGIM 948
            ++ +  +  + + Q+R   A A+    L +  A A E +RR I+
Sbjct: 884 DLVLTFNKTIDLMRQVREMLAHAMPNHPLREVLATAEELVRRDIV 928


>gi|348173912|ref|ZP_08880806.1| putative ATP-dependent RNA helicase [Saccharopolyspora spinosa NRRL
           18395]
          Length = 925

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 279/926 (30%), Positives = 450/926 (48%), Gaps = 71/926 (7%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E A   SFELDPFQR +   LE    VLV A T AGKT V E+A+ +A ++ ++  YT+P
Sbjct: 31  EFAGELSFELDPFQRTACQALEAGRGVLVCAPTGAGKTVVGEFAVHLALKEGRKCFYTTP 90

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +L +      VGL+TGD +++  A  +VMTTE+LR MLY GS  L ++ +
Sbjct: 91  IKALSNQKYADLCERHGSDAVGLLTGDTSINGEAQVVVMTTEVLRNMLYAGSRSLDQLGY 150

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE I+ LP  +++  LSAT+SNA +F EW+  + +    VV 
Sbjct: 151 VVMDEVHYLADRFRGAVWEEVILHLPEYVQVASLSATVSNAEEFGEWLQEV-RGDTTVVV 209

Query: 246 TDFRPTPL-QHYVFPVGGSGLYLVVDEKEQFRE----DNFVKLQDTFLKQKI--GGRREN 298
            + RP PL QH +    G  ++ +   + Q RE     N V+      +  +  GGRR  
Sbjct: 210 DEHRPVPLWQHMLV---GPRMFDLFGGETQNRELQINPNLVRHTQQLARVHLPYGGRRGA 266

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM---SKLDFN 355
             A  +  +       S + +++  +      P IVF FSR  C+Q A+S    + L   
Sbjct: 267 PNAKRKGPRPPRFYPPSRV-EMLTGLDAAGLLPAIVFIFSRNGCDQ-AVSQCMRAGLRLT 324

Query: 356 TQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQ 415
           T  E D + +V       L E D  +         L+RG+A HH+GLLP  KE VE LF 
Sbjct: 325 TDAEIDEIREVIDEHTANLPESDLAVLGFWEWREALERGLAAHHAGLLPAFKETVEELFV 384

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
            GLVKA+FATET A+G+NMPA+TVV   + K++G+SH  +  GEY Q++GRAGRRG D  
Sbjct: 385 RGLVKAVFATETLALGINMPARTVVLERLVKFNGESHVDLSPGEYTQLTGRAGRRGIDVE 444

Query: 476 GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           G  +++    ++   +  +   +  PL S+FR  Y   +NL+ R  GQ  A  +++ SF 
Sbjct: 445 GHAVVVWQPGVDPKQVAGLASTRTYPLRSSFRPGYNMAVNLVQRV-GQDAARELLEQSFA 503

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEI 589
           QFQ ++++  + ++V +  E   +L    EA      +  EY +L+  I++ EK L  + 
Sbjct: 504 QFQADRSVVGLSRRVERNNE---ALTGYSEAMHCHLGDFDEYFQLRRRISEREKHLARQN 560

Query: 590 TRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVN----VVKKPSAGVGTLPSRGGGY 640
            +  R      L  L  G +I V   G   G  VV++     + +P   V T     G  
Sbjct: 561 RQSRRAEAAKSLEKLRKGDVIAV-PAGRRSGLAVVIDPGLEPLGEPRPLVVTEDRWSGRL 619

Query: 641 IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
            V      +  L KI+L    D R   +R+ +   ++      P G  +    +    +D
Sbjct: 620 SVADFTSPVEPLGKIKLPKHVDTRSPKSRRDLAATLRNTGLEAPGGRSRW---RSDATDD 676

Query: 701 PEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
            E+         L   L AHP +   + E+  R  +R   +  E + L+ K+  +     
Sbjct: 677 AELAT-------LRRALKAHPCHGCDERESHARWAERYERLRGENENLRRKVAATTHSLA 729

Query: 760 RDELKNRSRVLKKLGHID-------ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDL 812
           R    +  R++  L   D       ++G V   GR    + +  +LL  E +    +  L
Sbjct: 730 R----SFDRIVALLTERDYLPVAGSSEGAVTQHGRRLSRLYSESDLLAAECLRVEAWRGL 785

Query: 813 DHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVE 872
              ++AA+ S  +  +   E +  ++        L  + R  AE++++ +    +D   E
Sbjct: 786 GPAELAAVVSSLV-YESRREGLAPQVPAGAVSDALATTWRLWAELEDDERRH-KLDRTRE 843

Query: 873 STVRPFLMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAAQAV 927
                     ++ W++G +  +V+        ++  G  +R  R++ + L+Q+R    A 
Sbjct: 844 PDA--GFAWPVFRWARGESLEKVLTAAESSGHELSAGDFVRWCRQVIDLLDQIREVVGAA 901

Query: 928 GEVNLEKKFAAASESLRRGIMFSNSL 953
             V      A A  ++RRG++ + ++
Sbjct: 902 DPVG--SSAAKAVTAIRRGVVAAGAV 925


>gi|417931509|ref|ZP_12574874.1| type III restriction enzyme, res subunit [Propionibacterium acnes
           SK182B-JCVI]
 gi|340775452|gb|EGR97505.1| type III restriction enzyme, res subunit [Propionibacterium acnes
           SK182B-JCVI]
          Length = 917

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 289/935 (30%), Positives = 456/935 (48%), Gaps = 97/935 (10%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A    Q+  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGQKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSQAPVVVMTTEVLRNMIYRNSHTLNTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L   +K+V LSAT+SNA +F EW+  +      VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDSRVKIVGLSATVSNAEEFGEWLDEVRGG-VRVVVSERRP 190

Query: 251 TPLQHYVF-------------PVG-GSGLYLVVDEKEQFREDNFVKLQDTFLKQK----I 292
            PL  +V              P      L  +  E+ +F+ D+  + +    K K     
Sbjct: 191 VPLTQHVAVARHLHNLFDSRRPTDVNPELVSIAKEEARFQRDDSRRPRGRSGKGKRNVSY 250

Query: 293 GGRRENGKASGRMAKGGSGSGGSD---IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
           G  R  G ++ R  +     G  +     ++V+ + +    P I+F FSR  C+     +
Sbjct: 251 GTGRFGGASAQRRGRSDRPRGPRNQPSRIQVVRSLHKASLLPAIIFVFSRSGCDAAVSQL 310

Query: 350 SKLD--FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
              D     Q+E   + ++ ++  + L +E+R        +   +RGIA HH+GLLPVIK
Sbjct: 311 LNTDVVLTNQQEARQLRRIAEHHGEGLTDEERRAVGWNHFVAAFERGIAAHHAGLLPVIK 370

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
            +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++GRA
Sbjct: 371 AIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTGRA 430

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  + G+  A 
Sbjct: 431 GRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-SMGRGKAR 489

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQL 581
            ++++SF QFQ ++ L   G    +  +  A +DA  EA      +  EY +L+ +I +L
Sbjct: 490 DLLEHSFAQFQIDRRL---GGSAVRNRQAQADIDAYLEASHCEKGDFTEYARLREEIREL 546

Query: 582 EKK--LMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSR 636
           E +   + +  RP ++   L  L  G +I V   G   GW VV++         GT   R
Sbjct: 547 EHQQARLRKGERPSQIADSLSRLDPGDIIAV-PSGRHAGWVVVID--------PGTHGKR 597

Query: 637 GGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQELES 681
           G     P  L +    + IRL                VP    P    Q+    +     
Sbjct: 598 GQ---RPHPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHP--GNQADRRCLGNAFD 652

Query: 682 RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEV 740
           R   GL K  PV+  +    +  +L +QI EL  ++ AHP +   D E+  R  +R   +
Sbjct: 653 RVRDGLGK--PVEQPRRAAVD-AELADQIAELRSQMKAHPCHSCPDRESHARFAERAMRL 709

Query: 741 NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELL 799
           N   ++  +K R ++      + +    VL+ LG++   G  V   GR    I +  +L+
Sbjct: 710 NRRSERELAKSR-AKATSIATKFERIVLVLEALGYLGEGGETVTDAGRMLAGIYSELDLV 768

Query: 800 VTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL-RMELAKPLQQLQESARKIAEIQ 858
            TE +  G F+ LD  Q+AA+ S  +   +  ++ +L RM    P +  + +  ++  I+
Sbjct: 769 TTEAIRRGVFDSLDCPQLAAVLSTIVHESRPGDRSHLHRM----PDRDSEAAESQLRAIR 824

Query: 859 NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRSARRL 913
            E  L +  D  +E   RP  +D+      Y W+ GA    V+   D+  G  +R  R++
Sbjct: 825 AEIGL-LERDHRIE---RPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRRVRQV 878

Query: 914 DEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            +   Q+  A   VGE NL         +++RG++
Sbjct: 879 CDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|78184204|ref|YP_376639.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902]
 gi|78168498|gb|ABB25595.1| DEAD/DEAH box helicase-like [Synechococcus sp. CC9902]
          Length = 926

 Score =  350 bits (897), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 284/932 (30%), Positives = 450/932 (48%), Gaps = 111/932 (11%)

Query: 43  AVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSA 102
           A P       D A  G+  +P      ++ ++F LD FQ  ++  L +  SV+VSA T +
Sbjct: 4   AQPEPSTQASDAAASGSGLDP------SQCFAFPLDDFQLEAIDALNQGHSVVVSAPTGS 57

Query: 103 GKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNAS 160
           GKT V EYAI  A    Q+V YT+PLKALSNQK R+  ++F D  VGL+TGD++++  AS
Sbjct: 58  GKTLVGEYAIYRALAHGQKVFYTTPLKALSNQKLRDFREQFGDENVGLLTGDLSVNREAS 117

Query: 161 CLVMTTEILRGMLYRGSE----VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            +VMTTEI R MLY  ++     L +V  V+ DE HYM D +RG VWEESII  PP I++
Sbjct: 118 IVVMTTEIFRNMLYAEADEHDDPLADVEAVVLDECHYMNDSQRGTVWEESIIHCPPPIQL 177

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           V LSAT++NA Q  +WI  +H  P  ++ +D RP PLQ + F     GL+ +++E     
Sbjct: 178 VALSATVANAGQLTDWIEKVHG-PTTLIVSDHRPVPLQ-FSF-CSAKGLHPLLNEAGTGL 234

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
             N           K+    +  K  GR  K          F + +M  +R   P I F 
Sbjct: 235 HPNC----------KVWRAPKGQKRKGRSNKPPQPEAPPISFVVAQM-AQRDMLPAIYFI 283

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRN-LPAIELMLPLLKRGI 395
           FSRR C++    +      TQ+E+  ++  F        E  R+ + A  LM     RGI
Sbjct: 284 FSRRNCDKSVRDLGAQCLVTQDEQARIQARFAAYSAANPEAVRDGIHADALM-----RGI 338

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
           A HH+G+LP  KEL+E LFQ+GLVK +FATET A G+NMPA++ V  ++ K     HR +
Sbjct: 339 AAHHAGVLPAWKELIEELFQQGLVKVVFATETLAAGINMPARSTVIASLSKRTERGHRPL 398

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSIL 514
              E++QM+GRAGRRG D +G  ++ V  + E       +   PA PLVS F  SY  +L
Sbjct: 399 MGSEFLQMAGRAGRRGLDSQGY-VVTVQSRFEGVREAGQLATSPADPLVSQFTPSYGMVL 457

Query: 515 NLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA-SGEAEVAEYHK 573
           NL+ R   +  A  +++ SF ++     L D  + +S+L  + + LD  +G+    ++  
Sbjct: 458 NLLQRHSLE-KARELVQRSFGRYLAGLDLVDDEEMLSQLRLQLSQLDGVAGDVPWEDFED 516

Query: 574 LKLDIA--------------QLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVV 619
            + +                Q E+ L +E+T   + L +  +G L+ ++         V 
Sbjct: 517 YEKERGRLREERRLLRILQQQAEETLANELT---QALQFASNGALVSLKSAQLR--GRVT 571

Query: 620 VNVVKKPSAGVGTLP------SRGGGYIVPVQ--LPLISTLSKIRLS--VPP------DL 663
             V+ +   G G  P            ++P Q  + L + LS +++   VPP      ++
Sbjct: 572 PAVIVEKVNGPGQFPRLLCLTDDNVWILLPCQGVVSLHAELSCLQVDGVVPPMLQRSGEI 631

Query: 664 RPLD-ARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPL 722
           R  D A   + LAV  +  R     P+ +          EV+     +++LE  L  HP 
Sbjct: 632 RHGDQASGQLALAVSHMAKRHDMTTPQYDLAG-------EVLTQARLVQQLELDLEQHPA 684

Query: 723 NKSQDENQIRCFQRKA-EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV 781
           ++  D  Q++  +R+  E+ HEI + + ++   +  +  D       +L++ G +D    
Sbjct: 685 HRWGDRKQLKKHRRRMEELEHEIAE-RQRLLHHRSNRHWDMFLALKDILQQFGCLDDLDP 743

Query: 782 VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA-------------LASCFIPVD 828
            ++ GR    +   +EL +   + +G  ++LD   +AA             L S F P  
Sbjct: 744 TEV-GRTVAALRGDNELWLGLALMSGHLDELDPPNLAAVFEAISTEVNRPDLWSGFPPSG 802

Query: 829 KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
            + E +     L + L + QE A  +                V +   P LM ++  W+K
Sbjct: 803 PAEEALQDLSGLRRELLRAQERASVV----------------VPAWWEPELMGLVEAWAK 846

Query: 889 GATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           G ++ ++I  T + EG ++R  RR  + L Q+
Sbjct: 847 GTSWVDLIANTSLDEGDVVRIMRRTVDLLAQV 878


>gi|409358499|ref|ZP_11236862.1| ATP-dependent helicase [Dietzia alimentaria 72]
          Length = 886

 Score =  349 bits (896), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 272/920 (29%), Positives = 447/920 (48%), Gaps = 95/920 (10%)

Query: 72  TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKAL 131
           T  F  DPFQ  S A L+   ++LVSA T +GKT V EYA   A     R  YT+P+KAL
Sbjct: 20  TEGFTPDPFQIESFAALDAGRNLLVSAPTGSGKTLVGEYAAHRALSGGGRCFYTTPIKAL 79

Query: 132 SNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           SNQK+R+  Q F  ++VGL+TGD ++  +A  +VMTTE+LR M+Y G+  L ++  V+ D
Sbjct: 80  SNQKFRQFRQRFGTENVGLLTGDHSIDADAPIVVMTTEVLRNMVYGGTYALHDLDCVVMD 139

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           EIHY+ DR RGVVWEE I+ L PAI++V LSAT+SN  +  +WI  +      VV +D R
Sbjct: 140 EIHYLGDRSRGVVWEEIILTLDPAIRLVGLSATLSNTDELGDWITEIRGDTA-VVISDRR 198

Query: 250 PTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG 309
           P PL H ++  G     LV     +   DN  +++  +  +++  R     A  +     
Sbjct: 199 PVPLAHMLYTDGD----LV---PVRAAADNRRRVRGGYHDERVAARPRAQWARRQ----- 246

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVF 367
                     +++ + +    P I F FSR  C+     M  ++L   T EE   +    
Sbjct: 247 ---------DVIEHLDDAHLLPAIYFVFSRAGCDGAVSQMRRARLRLTTGEESRRIASHV 297

Query: 368 QNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATET 427
             A   + + D +          L  GIA HH+G+LP+ + +VE LF  GL+K +FATET
Sbjct: 298 DEACAAVPQHDLDALDYSSFRAGLVSGIAAHHAGMLPLFRTVVEELFSAGLIKVVFATET 357

Query: 428 FAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQME 487
            A+G++MPA+ VV     K++GD+H  + + EY Q++GRAGRRG D +G  +++    ++
Sbjct: 358 LALGIHMPARAVVLEKTTKFNGDTHAMLTAAEYSQITGRAGRRGIDTKGTAVVLDQPDLD 417

Query: 488 MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIG 547
           ++ L  +V     PL S F   Y   +NL+ +  G   A  +I  SF QFQ ++ L    
Sbjct: 418 LDALSALVDTPRFPLYSAFAPDYSMAVNLVEQ-RGVEEATSLIGRSFAQFQTDRTLVSRS 476

Query: 548 KKVSKLEEE----AASL-DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSG 602
           + + +  +E     ASL +A G+ ++ +Y  L+ +++++E+K                + 
Sbjct: 477 RAIERRADERDRMRASLEEAGGDTDLDDYMALRAELSRIERKAEKSTQ----------ND 526

Query: 603 RLIKVREGGTDWGWGVVVNVVKKPSAGVGT-LPSRGGGYIVPVQLPLIST-----LSKIR 656
           RL  VR        G V+ V +K    V T L  R      P  L L        L +  
Sbjct: 527 RLSAVRAAMLKQTAGSVITVGRKRFGMVATVLQVRTDIQSDPALLCLTDIGWTGWLRQND 586

Query: 657 LSVPP------DL----RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI-EDPEVVD 705
            + PP      DL    R LD R    L +Q +E    +   ++   K   + +DP +  
Sbjct: 587 FAAPPVPVGRVDLPKGRRKLDGRAKRAL-IQRMEHLRGKAKGRMKNAKAKPVRKDPRIAP 645

Query: 706 LVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMR---DSQIQKFRD 761
               + E       HPL+++   +++ R  +R A  + ++  +  ++    DS  ++FR 
Sbjct: 646 ARRALRE-------HPLHEAPGIDKLARLHERWARAHADVVTMTGEVESDSDSLARRFRR 698

Query: 762 ELKNRSRVLKKLGHI-DADGVVQLK--GRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            +K    +L+ LG++ ++DG ++    G     + T  +L V E +  G +  LD   +A
Sbjct: 699 IVK----LLEHLGYLEESDGSLRATEAGNLLAGVHTEQDLFVAECLRRGVWRGLDPAGLA 754

Query: 819 ALASCFI--PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
           A+ +  +  P  +S+ +      L   L + +  A  +A ++   +L    D      + 
Sbjct: 755 AVIATVVAHPRSESAVRAPSDETLRAALDETERVATDVAGVEQAHRLPSTPD------LD 808

Query: 877 PFLMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVN 931
           P L  V++ W  G   A ++  +     ++  G  +RSAR + + L Q+   AQ V E  
Sbjct: 809 PGLAPVLHHWVSGGALASILAASWQEGVELTAGDFVRSARLVMDLLAQV---AQ-VAEPE 864

Query: 932 LEKKFAAASESLRRGIMFSN 951
           + +   +A  SLRRG++  +
Sbjct: 865 VARTARSAVGSLRRGVVLDH 884


>gi|315604192|ref|ZP_07879258.1| helicase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313898|gb|EFU61949.1| helicase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 921

 Score =  349 bits (895), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 280/926 (30%), Positives = 438/926 (47%), Gaps = 99/926 (10%)

Query: 71  KTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKA 130
            T SF  DPFQ  ++  +E   SVLV+A T AGKT V ++   +A     R  YT+P+KA
Sbjct: 52  STLSFSPDPFQIQALDAVEAGSSVLVAAPTGAGKTIVGQFGAYVALEQGMRAFYTTPIKA 111

Query: 131 LSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIF 188
           LSNQKY EL   F   +VGL TGD +++  A  +VMTTE+ R M+Y G+  L+++  VI 
Sbjct: 112 LSNQKYLELCDLFGAANVGLATGDTSVNSGAPVVVMTTEVARNMIYAGAP-LRDLGVVIL 170

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE+HY+ D+ RG VWEE II LP  + ++ LSAT+SNA +F  WI  + +  C ++ ++ 
Sbjct: 171 DEVHYLADKMRGPVWEEVIIHLPAHVAIIALSATVSNAEEFGAWIREV-RSTCEIIVSEK 229

Query: 249 RPTPL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
           RP PL QH +       LY     K +   +     +D  ++   G R  N +   R   
Sbjct: 230 RPVPLYQHMIVGEDIFDLYAPTG-KGKLNPELVAATRDFGMRGGRGSRSWNREVRVRRES 288

Query: 308 GGSGSGGSDIFKIVKMIMER-KFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVE 364
             S            + ++R +  P I F FSR  CE     +  +++   T+ E   +E
Sbjct: 289 RPS----------TLISLDRGRLLPAITFIFSRAGCEDAVRQILSTRITLTTRSEAAEIE 338

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
                 +  L  ED  +   E     L RGIA HH+G+LP++KE VE LF  GLVK ++A
Sbjct: 339 SYVDEVIALLPPEDAIILGAEAWKRGLMRGIAAHHAGMLPLMKESVEHLFSRGLVKMVYA 398

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A+G+NMPA+TVV  ++ KW+G +H  + +GEY Q+SGRAGRRG D  G  ++    
Sbjct: 399 TETLALGINMPARTVVIESLTKWNGSAHVSLSAGEYTQLSGRAGRRGIDTEGHAVVSHRG 458

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            +    +  +   +  PL+S F  +Y  ++NL++R+    T   V+++SF Q+Q + A+ 
Sbjct: 459 GVAPEEVAALASKRTYPLISAFTPTYNMVVNLLARSTRAQT-RKVLESSFAQYQADSAVV 517

Query: 545 DIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEK--------------- 583
            +  ++++LE   A  DA+ E       +V EY  L+  + Q EK               
Sbjct: 518 ALASRLTELE---AQRDATAEDLSCSHGDVREYLTLRDQLGQTEKSGARARKREARDESR 574

Query: 584 KLMSEITRPERVLYYLGSGR---LIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY 640
           +++S + RP  VL  L  GR   L  V    T     V V+V+ + +      P    G 
Sbjct: 575 RILSGV-RPGDVLA-LTRGRKTRLCVVGAKATSASGRVEVSVIGEDATWRALAPEDVRGA 632

Query: 641 IVPVQLPLISTLSKIRLSVP--PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
           I  V            +S+P    LR    R  I     EL S   +G+  + P +  + 
Sbjct: 633 IAVVG----------HMSIPGGSALRRTKERTRI---AGELRSGAAKGI-YVVPAESTQA 678

Query: 699 EDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQ 757
            DP        I  L   +  HP+++    E   R   + A +  EI +L+S + DSQ  
Sbjct: 679 FDP--------ISALRVAMRQHPVHRCPHREEHARAGAQWARLEREINRLRSSI-DSQTG 729

Query: 758 KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
               +      VL++LG +  D V     R   +    D L++   +  G ++ LD  ++
Sbjct: 730 SVAAQFDRVCAVLERLGFLAGDEVTDAGQRLRRIFGERD-LVIAMSLDEGAWDGLDECEL 788

Query: 818 AALASCFIPVDKSSEQ----------INLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
           A++ S  +   +S +             LR    + +  L+   R  AE +  C     +
Sbjct: 789 ASMVSALVYDSRSEDDAQELAPSGVGTRLRTAWEECMGTLERVHR--AEKRYGCDPTPGL 846

Query: 868 DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
           D          LM     W+ G+T A  I+   I  G  +R  R++ + L Q+   A A 
Sbjct: 847 DGA--------LMAATLAWAHGSTLATAIEGAPIQPGDFVRWMRQVMDCLGQI---ASAS 895

Query: 928 GEVNLEKKFAAASESLRRGIMFSNSL 953
              NL ++   A E + RGI+  +++
Sbjct: 896 DSSNLARRAEGAKERIGRGIVAWSTI 921


>gi|427704263|ref|YP_007047485.1| superfamily II RNA helicase [Cyanobium gracile PCC 6307]
 gi|427347431|gb|AFY30144.1| superfamily II RNA helicase [Cyanobium gracile PCC 6307]
          Length = 943

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 278/917 (30%), Positives = 444/917 (48%), Gaps = 104/917 (11%)

Query: 58  GTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFR 117
           GT A P     + + + F LD FQ  ++  L +  SV+VSA T +GKT V EYAI  A  
Sbjct: 27  GTGAVP----PLEQLFPFPLDGFQLEAIDALNQGHSVVVSAPTGSGKTLVGEYAIHRALA 82

Query: 118 DKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYR 175
             Q+V YT+PLKALSNQK R+   +F D  VGL+TGD++L+  A  +VMTTEI R MLY 
Sbjct: 83  HGQKVFYTTPLKALSNQKLRDFRHQFGDEKVGLLTGDLSLNREAQVVVMTTEIFRNMLYA 142

Query: 176 -----GSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFA 230
                  + L +V  V+ DE HYM D +RG VWEESII  P  +++V LSAT++NA Q  
Sbjct: 143 EIDHADDDPLADVEAVVLDECHYMNDTQRGTVWEESIIHCPSRVQLVALSATVANAGQLT 202

Query: 231 EWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ 290
           +WI  +H  P  ++++DFRP PL  + F     GL+ +++++      N           
Sbjct: 203 DWIERVHG-PTRLIHSDFRPVPLA-FSF-CSAKGLHPLLNDEGTGLHPNC---------- 249

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
           K+    ++ +  G             I  +V  + ER+  P I F FSRR C++    ++
Sbjct: 250 KVWRPPKSTRRKGPKEPRPPQPEAPPIGFVVAQMAEREMLPAIYFIFSRRNCDRSVRDLA 309

Query: 351 KLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELV 410
           K+     EE+  + +     +    E  R     + +L    RGIA HH+G+LP  KEL+
Sbjct: 310 KVCLVNPEEQARIRRRLDAFMAVTPEAVREGGHADALL----RGIAAHHAGVLPAWKELI 365

Query: 411 ELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRR 470
           E LFQ+GL+K +FATET A G+NMPA+T V +A+ K     HR +   E++QM+GRAGRR
Sbjct: 366 EELFQQGLIKVVFATETLAAGINMPARTTVISALSKRTERGHRPLMGSEFLQMAGRAGRR 425

Query: 471 GKDDRGICIIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
           G D +G  ++ V  + E       +   PA PLVS F  SY  +LNL+ R +    A  +
Sbjct: 426 GLDTQGY-VVTVQSRFEGVREAGALATSPADPLVSQFTPSYGMVLNLLQRYD-LAKAREL 483

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA-----EYHKLKLDIA----- 579
           ++ SF ++     L +   ++++L  + A+L++SG  EV      +Y K++  +      
Sbjct: 484 VERSFGRYLAGLDLAEDEARIAELMAQLATLESSG-GEVPWDDFEDYEKVRGRLREERRL 542

Query: 580 ------QLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG---- 629
                 Q E+ L  E+T     L +   G L+ V+           V V K P +G    
Sbjct: 543 HRILQQQAEETLAHELT---LALQFASEGTLVSVKAPALRSRVTPAVIVAKVPGSGQFPL 599

Query: 630 VGTLPSRGGGYIVPVQ--LPLISTLSKIRLSV--PPDLRPL-------DARQSILLAVQE 678
           +  L       ++P    + L + LS +++    PP+L          +A   + LAV  
Sbjct: 600 LLCLTDENVWILLPCHAVVTLHAELSCLQVDQLEPPELHHANELRHGDNASGGLALAVSS 659

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA 738
           +  R     P+     D+  E  +  +LV Q   LE +L AHP ++  D   ++  +R+ 
Sbjct: 660 MARRHDMHTPRY----DLAGEVRQQGELVRQ---LEQELEAHPAHRWGDRKHLKKHRRRM 712

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK--GRAACLIDTGD 796
           E   E    + ++   +  +  D   +   +L+  G +D +  ++    GR    +   +
Sbjct: 713 EELQEEIGERQRLLHHRANRHWDTFLSLIDILRFFGALDGEEGLEPTEVGRTVAALRGDN 772

Query: 797 ELLVTELMFNGTFNDLDHHQVAA-------------LASCFIPVDKSSEQINLRMELAKP 843
           EL +   + +G  + LD  ++AA             L   + P   S E ++    L + 
Sbjct: 773 ELWLGLALMSGHLDALDPAELAAVLEAISTEVNRPDLWCGYPPPPASEEALHDLRSLRRE 832

Query: 844 LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
           LQ+ QE A  +  +  E                P L  +++ W++GA++ +VI  T + E
Sbjct: 833 LQRQQERASVVVPVWWE----------------PELTGLVHAWARGASWNDVIANTSLDE 876

Query: 904 GSIIRSARRLDEFLNQL 920
           G ++R  RR  + L Q+
Sbjct: 877 GDVVRILRRTVDLLAQI 893


>gi|119513661|ref|ZP_01632665.1| Type III restriction enzyme, res subunit [Nodularia spumigena
           CCY9414]
 gi|119461690|gb|EAW42723.1| Type III restriction enzyme, res subunit [Nodularia spumigena
           CCY9414]
          Length = 872

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 277/895 (30%), Positives = 445/895 (49%), Gaps = 106/895 (11%)

Query: 77  LDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKY 136
           +D FQ+ ++A L    SV+V A T +GKT V EYAI  A    +RV YT+PLKALSNQK 
Sbjct: 1   MDQFQKDAIASLNSGRSVVVCAPTGSGKTLVGEYAIYRALSRGKRVFYTTPLKALSNQKL 60

Query: 137 RELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVAWVIF 188
           R+  ++F    VGL+TGD++++ +A  LVMTTEI R MLY G+ +      L +V  V+ 
Sbjct: 61  RDFREQFGYDQVGLLTGDISINRDAPILVMTTEIFRNMLY-GTPIGQIGISLVDVEAVVL 119

Query: 189 DEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDF 248
           DE HYM DR+RG VWEESII+ P  I++  LSAT++N+ Q  +W+  +H  P  ++Y+DF
Sbjct: 120 DECHYMNDRQRGTVWEESIIYCPREIQLAALSATVANSDQLTDWLNRVHG-PTDLIYSDF 178

Query: 249 RPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKG 308
           RP PL+ Y       GL+ +++E                 K KI  R  N    G+  +G
Sbjct: 179 RPVPLEFYY--CNPKGLFPLLNES----------------KTKINPRLAN---RGKRKQG 217

Query: 309 GSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             G  G      I   +  + +R   P I F FSRR C++    +  L     +E   + 
Sbjct: 218 DRGRNGRPEAPGIAYTLSQLQQRDMLPAIYFIFSRRGCDKAVAEVGDLWLVNNDESQILR 277

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
           +   N +    E  R+       +  L RGIA HH+G+LP  K LVE LFQ+GL+K +FA
Sbjct: 278 EQIDNFLARNPEAGRSG-----QIAPLYRGIAAHHAGILPAWKGLVEELFQQGLIKVVFA 332

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D +G  + +   
Sbjct: 333 TETLAAGINMPARTTVISTLSKRTDSGHRLLNASEFLQMAGRAGRRGMDLQGHVVTVQTP 392

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
                    +   KP PLVS F  SY  +LNL+ +      A+ +I+ SF Q+     L 
Sbjct: 393 FEGSKEAAYLATSKPDPLVSQFTPSYGMVLNLL-QIHTLEQAKELIERSFGQYMATVHLT 451

Query: 545 DIGKKVSKLEEEAASLD----ASGEAEVAEYHKLKLDIAQLEKKLMSEI------TRPER 594
              +++S+L+ + A L     A  E E+A Y KL+  + ++E++L+S +       R E 
Sbjct: 452 PEYEEISELQTQLAQLHEQIAAVNEHELAVYEKLRQRL-KVERQLLSTLQEQAVENRQEE 510

Query: 595 VLYYLG---SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPV------- 644
            +  L    SG L+ ++  G +    + +  V      VG +P     Y++ +       
Sbjct: 511 FVMMLSFAVSGTLLSLK--GKNIAVSIPITAVL-----VGKIPGGEAPYLICLGQDNRWY 563

Query: 645 ------------QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNP 692
                       +LP +     I   VPP    L   QS  L   E      Q +P+   
Sbjct: 564 VVTTKDVVDLYAELPRVDVPEHI---VPPPELLLKPGQS--LRGSEETFAIAQRIPESG- 617

Query: 693 VKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMR 752
            +      PEV + ++++  ++ +L A+P+++S + ++I  F+R+A   +   + + +  
Sbjct: 618 -EGSIYMPPEVAEQLSRVTAVQEQLEANPIHQSGNVSKI--FKRRA--RYVELEAELEEL 672

Query: 753 DSQI----QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
            SQ+    Q+  +E  N   +L++   +D     +L G+ A  I   +EL +  +  +G 
Sbjct: 673 QSQVEEHSQRHWEEFVNLIAILQQFDALDNLVPTKL-GQIAAAIRGENELWLGLVFESGE 731

Query: 809 FNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
              LD H +AA A+  +   P   S     L  E+ + L +L+   RKI ++Q    + +
Sbjct: 732 LEHLDPHHLAAAAAALVIETPRPDSRVHFELSNEVVEALAKLRNIRRKIFQLQRRYNVAL 791

Query: 866 NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            +    E      L+ ++  W+ G  + E+ + T + EG ++R  RR  + L+Q+
Sbjct: 792 PIWLEFE------LIAIVEQWALGTPWTELCENTTLDEGDVVRILRRTLDLLSQI 840


>gi|302561563|ref|ZP_07313905.1| ATP-dependent RNA helicase [Streptomyces griseoflavus Tu4000]
 gi|302479181|gb|EFL42274.1| ATP-dependent RNA helicase [Streptomyces griseoflavus Tu4000]
          Length = 946

 Score =  349 bits (895), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 272/933 (29%), Positives = 448/933 (48%), Gaps = 80/933 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 41  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALLQGKKCFYTTPIKALS 100

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  +  V+ DE
Sbjct: 101 NQKYADLCRRYGTDKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGHVVMDE 160

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LPP++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 161 VHYLSDRFRGAVWEEVIIHLPPSVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 219

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V  + G  +Y + +E E  ++    +  ++      +   G R  G+ + R A 
Sbjct: 220 VPLFQHV--LAGRRIYDLFEEGEGRKKAVNPDLTRMARLEAARPSWGDRRRGRNNMREAD 277

Query: 308 GGSGSGGSDIF------KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEE 359
                            ++++ +      P I F FSR  CE        + L  N +E 
Sbjct: 278 RERERRQRSRVWTPSRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLFAGLRLNDEEA 337

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           ++ V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLV
Sbjct: 338 REQVRSLVEERTASIPAEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLV 397

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           KA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  +
Sbjct: 398 KAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAV 457

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    M  + L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ 
Sbjct: 458 VLWQRAMNPDHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQA 516

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER-- 594
           +K++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R  
Sbjct: 517 DKSVVGISRQVQRNEEGLDGYKASMTCHLGDFEEYARLRRELKDRETELARQGAAHRRAE 576

Query: 595 ---VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST 651
               L  L  G +I V  G         + +V  P    G      G        PL+ T
Sbjct: 577 AAVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFDHHDGPRPLVLT 631

Query: 652 -------LSKIRLSVPPDL-------RPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
                  L+ I   VP +        +  +AR     + ++L S        + P +  K
Sbjct: 632 AERQVKRLASIDFPVPVEALERMRIPKSFNARSP--QSRRDLASALRTKAGHITPERHHK 689

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDS 754
                  D   +I  L  +L AHP +  QD E+  R  +R   +  +  QL+ ++  R +
Sbjct: 690 KRSQAADD--REIARLRKELRAHPCHGCQDREDHARWAERYHRLLRDTSQLERRIEGRTN 747

Query: 755 QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
            I +  D +     +L ++ ++  D V +   R A L    D LL +E +  G +  L  
Sbjct: 748 TIARTFDRIVA---LLTEMDYLRGDEVTEHGKRLARLYGELD-LLASECLREGVWEGLAP 803

Query: 815 HQVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            ++AA  S  +              P  ++   +   + +   L  L+E  R I++ +  
Sbjct: 804 AELAACVSALVYEARAADDAMAPKLPSGRAKAALGEMVRIWGRLDALEEDFR-ISQTEGV 862

Query: 861 CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            + E ++                Y W+ G    EV++  ++  G  +R  +++ + L Q+
Sbjct: 863 GQREPDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQI 912

Query: 921 RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            AAA +     + K    A + L RG++  +S+
Sbjct: 913 AAAAPSADGSTVPKNARKAVDGLLRGVVAYSSV 945


>gi|220912683|ref|YP_002487992.1| DEAD/DEAH box helicase [Arthrobacter chlorophenolicus A6]
 gi|219859561|gb|ACL39903.1| DEAD/DEAH box helicase domain protein [Arthrobacter
           chlorophenolicus A6]
          Length = 984

 Score =  348 bits (894), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 291/961 (30%), Positives = 471/961 (49%), Gaps = 101/961 (10%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   +T  FELD FQR +   LE  + VLV+A T AGKT V E+AI +A +   +  YT+
Sbjct: 50  GAFTQTLDFELDDFQRQACRSLEGGKGVLVAAPTGAGKTIVGEFAIYLALKRGLKAFYTT 109

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ EL +++  ++VGL+TGD +++  A  +VMTTE+LR MLY  S  L ++ 
Sbjct: 110 PIKALSNQKFTELGEKYGAENVGLLTGDTSINGEAPVVVMTTEVLRNMLYADSATLDDLG 169

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP  +++V LSAT+SNA +F  W+  +      ++
Sbjct: 170 YVVMDEVHYLADRFRGAVWEEVIIHLPSEVQVVSLSATVSNAEEFGAWLDTVRGD-TDII 228

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS-- 302
            ++ RP PL  +V  VG   + L   E         V   +    + + G+  N + +  
Sbjct: 229 VSEHRPVPLWQHVM-VGRRIMDLFAGETTFDEIAPAVDAAEDDQPKTVSGKSRNKETNRG 287

Query: 303 -----------------------GRMAKGGSGSGG------------SDIFKIVKMIMER 327
                                  GR+ +G  G+              +   +++  +   
Sbjct: 288 FDVNPELLTVARNEGQQGFRSRPGRVQRGRRGNDRPPRPAEQTGVRRASRPQVIASLDRM 347

Query: 328 KFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIE 385
              P I F FSR  C+        S L   T++E+  + +    A   +  +D ++    
Sbjct: 348 DLLPAITFIFSRAGCDAAVAQCVASGLWLTTEKEQRIIAERVDEAGRDIPPDDLDVLGFW 407

Query: 386 LMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVK 445
                L RG A HH+G+LP  KE+VE LF +GLVKA+FATET A+G+NMPA++VV   + 
Sbjct: 408 SWRDGLLRGFAAHHAGMLPTFKEVVEKLFADGLVKAVFATETLALGVNMPARSVVLEKLD 467

Query: 446 KWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVST 505
           K++G++H  I +GEY Q++GRAGRRG D  G  +++     +   +  +   +  PL S+
Sbjct: 468 KFNGEAHVDITAGEYTQLTGRAGRRGIDVEGHAVVLWQPGGDPTAVAGLASRRTYPLNSS 527

Query: 506 FRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE 565
           FR +Y   +NL+++  G+  A  ++++SF QFQ ++++  + ++V   EE  A    S  
Sbjct: 528 FRPTYNMSINLLAQF-GRARAREILESSFAQFQADRSVVGLARQVRSREESLAGFAKSMT 586

Query: 566 ---AEVAEYHKLKLDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWG 617
               +  EY +L+ +++ +E       TR  +      L  L  G ++ V  GG   G  
Sbjct: 587 CHLGDFTEYARLRRELSDVENAASRTTTRARKSMSDDSLARLMPGDVVDV-PGGRAPGPA 645

Query: 618 VVVN---VVKKPSAGVGTLPS---RGG-----GYIVPVQLPLISTLSKIRLSVPPDLRPL 666
           +V++     ++P   V TL +   R G     G I PV    I         VP   R L
Sbjct: 646 IVLSSDHSSREPRPAVLTLDNQLRRIGTDDLEGPIAPVT--RIRIPKSFNAKVPKSRRDL 703

Query: 667 --DARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK 724
              AR ++       E+R P   P  N   D  +    + D   +I +L   L AHP + 
Sbjct: 704 ASSARNAL------RENRPPA--PGHNRNNDFGLAS-ALPDQEKRIADLRRALRAHPCHG 754

Query: 725 SQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDA--D 779
             + E+  R  +R  ++  E   L  ++  R + I K  D + +   VL   G++DA  D
Sbjct: 755 CNEREDHARWSERWWKLRRETDNLVRQIQGRTNTIAKTFDRVCD---VLSAYGYLDASDD 811

Query: 780 G--VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLR 837
           G   +   G+    I    +LL+++ +  G F+DLD  +VAALAS  +      E   LR
Sbjct: 812 GRLAISPDGQRLRRIYGEKDLLISQSLRLGAFDDLDAVEVAALASVLV-YQAKREDRGLR 870

Query: 838 MELAKPLQQLQESARKIAEIQNECKLEVNVDEY--VESTVRPFLMDV--IYCWSKGATFA 893
             +  P   L+ S   +  ++    LE +V+E   +  T  P L  V  IY W++G    
Sbjct: 871 PRM--PSVSLETSVDIV--VREWSALE-DVEEANKLPLTGEPELGLVWPIYKWARGRHLQ 925

Query: 894 EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVG-EVNLEKKFAAASESLRRGIMFSNS 952
           +V+  TD+  G  +R  +++ + L+Q+   A+  G E  L +    A   +RRG++  +S
Sbjct: 926 DVLSGTDLAAGDFVRWVKQVVDLLDQI---AKIPGLEPRLARLCGEAINLIRRGVVAYSS 982

Query: 953 L 953
           +
Sbjct: 983 V 983


>gi|291450457|ref|ZP_06589847.1| helicase [Streptomyces albus J1074]
 gi|421740794|ref|ZP_16179025.1| superfamily II RNA helicase [Streptomyces sp. SM8]
 gi|291353406|gb|EFE80308.1| helicase [Streptomyces albus J1074]
 gi|406690789|gb|EKC94579.1| superfamily II RNA helicase [Streptomyces sp. SM8]
          Length = 935

 Score =  348 bits (893), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 270/937 (28%), Positives = 449/937 (47%), Gaps = 90/937 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQLDACRSLEEGKGVLVAAPTGSGKTIVGEFAVHLALGQSKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++P+A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYADLAKRYGADKVGLLTGDNSVNPDAPVVVMTTEVLRNMLYAGSQTLTGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LPP++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPPSVTLVSLSATVSNAEEFGDWLDTV-RGDTDVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQ---------FREDNFVKLQDTFLKQKIGGRRENGKA 301
            PL  +V  + G  +Y + +E E           R       + T  K +  GR      
Sbjct: 211 VPLFQHV--LAGRRMYDLFEEGEGAKKAVNPDLLRMARLESSRPTGPKDRRRGRNMREAD 268

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEE 359
             R  +  S +      ++++ +      P I F FSR  CE        + L  N    
Sbjct: 269 RERERRQRSRTWTPSRPEVIERLDAENLLPAITFIFSRAGCEAAVQQCLYAGLRLNDDAA 328

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +  V ++ +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLV
Sbjct: 329 RSAVREIVEERTAAIPDEDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVEELFLRGLV 388

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           KA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  +
Sbjct: 389 KAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAV 448

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ 
Sbjct: 449 VLWQRAMNPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVHQF-GRHRSRELLETSFAQFQA 507

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPERVL 596
           ++++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R  
Sbjct: 508 DRSVVGISRQVQRNEEGLEGYAASMTCHLGDFEEYGRLRRELKDRETELARQGAGQRRA- 566

Query: 597 YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV------GTLPSRGGGYI------VPV 644
               +G L K+R G        +++V     AG+      G    R  G+        P 
Sbjct: 567 --EAAGALEKLRPGD-------IIHVPTGKYAGLALVLDPGLPAGRSNGHRGFDHHDGPR 617

Query: 645 QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG-----------LPKLNPV 693
            L L +     RL+      P++A   + +  +   +R PQ               L P 
Sbjct: 618 PLVLTAERQVKRLAAMDFPVPVEALDRMRVP-KSFNARSPQSRRDLASALRTRAGHLEPK 676

Query: 694 KDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM- 751
           +  K       D   +I  L   + AHP +   + E+  R  +R   +  + +QL+ ++ 
Sbjct: 677 RHRKGRSAAADD--REIARLRTAIRAHPCHGCDEREDHARWAERYHRLKRDTRQLERRIE 734

Query: 752 -RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
            R + I +  D + N   +L +LG++  + V +   R + L    D LL +E +  G + 
Sbjct: 735 GRTNTIARTFDRIVN---LLTELGYLRGNEVTEDGRRLSRLYGELD-LLASECLREGVWE 790

Query: 811 DLDHHQVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            L   ++AA  S  +              P   +   +   + +   L  L+E    I++
Sbjct: 791 GLGPAELAACVSALVFEARQADDAVVPKLPSGAAKSALGEMVRIWGRLDALEEQ-HGISQ 849

Query: 857 IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            +   + E ++                Y W+ G     V++  ++  G  +R  +++ + 
Sbjct: 850 TEGVGQREPDLG----------FAWAAYMWASGKGLDAVLREAEMPAGDFVRWCKQVIDV 899

Query: 917 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           L Q+ AAA     V    +   A +++RRG++  +S+
Sbjct: 900 LGQIAAAAPEGSTVARSAR--KAVDAVRRGVVAYSSV 934


>gi|387596499|gb|EIJ94120.1| ATP-dependent DEAD/H RNA helicase [Nematocida parisii ERTm1]
          Length = 922

 Score =  348 bits (893), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 195/484 (40%), Positives = 283/484 (58%), Gaps = 26/484 (5%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D FQ+     + +++S+ V+AHTS+GKT +AEYA  +A     R+IYTSP+KALSN
Sbjct: 78  SFEPDNFQKQCFYYINKSQSIFVTAHTSSGKTLIAEYASYIAELHDTRMIYTSPIKALSN 137

Query: 134 QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
           QKYRE  Q+F  VG++TGD  ++  A CLVMTTEILR MLYRGS +L +V +++FDEIHY
Sbjct: 138 QKYREFSQKFSSVGILTGDAQINSTAKCLVMTTEILRNMLYRGSTILDDVEFIVFDEIHY 197

Query: 194 MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
           + D+ERGVVWEE II LP  I ++FLSAT  NA     WI  +  +  +++ T+ R   L
Sbjct: 198 LGDKERGVVWEEVIIMLPRHISLIFLSATSPNAKDMCGWISTIKNKEMYLIGTEKRAVEL 257

Query: 254 QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM-------- 305
           +H ++      LY++  +  +F        Q+ +LK K  G  E  K   R         
Sbjct: 258 EHGIY--FRKELYMLT-QNHKFN-------QEEYLKAKNKGAVEIFKEKQRTIPALQKKT 307

Query: 306 --AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
             AK  + +       I + +++R   P++ F FS+   EQ       LD  T EEK  +
Sbjct: 308 VEAKKKAPTILETPIHIARDLIQRNLAPIVFFDFSKSRIEQSFSMCDSLDLTTAEEKSLI 367

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
                +A+  L + DR LP I  ++P L RG+ +HHSGLLP++KE++E+LF  G ++ LF
Sbjct: 368 RGFISDALLKLPKADRALPQITFVIPSLIRGVGMHHSGLLPILKEIIEMLFTTGALRVLF 427

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRY--IGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +TET AMGLNMPA+TVV    KK+  ++  Y  I  GEY QM+GRAGRRG D +G  II 
Sbjct: 428 STETLAMGLNMPARTVVIRTTKKYSPETRSYVDISVGEYTQMAGRAGRRGYDIKGTSIIE 487

Query: 482 VDEQ--MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
              Q  +  + L  +  G    + S F ++   IL L+ R +   + E +++ SF + + 
Sbjct: 488 CSGQEILPESLLVKLQTGTSMAIESNFYITARMILKLL-RVKS-VSIEEMVRFSFGKSKI 545

Query: 540 EKAL 543
           E+ +
Sbjct: 546 EQKI 549



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 16/195 (8%)

Query: 770 LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ--VAALASCFIPV 827
           L+ LG+ID    + LKG+ A   ++ + +L TE++ +    ++  H+  +  +   F   
Sbjct: 732 LRTLGYIDGLNNITLKGKIAYEFNSIECVLTTEVLLSPQIANMKTHELIIGLVGLTFF-- 789

Query: 828 DKSSEQINLRMELAKPLQQ--------LQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
               E+  L+ E   P ++        L  S   I EI +E K                 
Sbjct: 790 ----EKHQLKEEAEHPREEPRTEQIKILMPSLLIINEIVSELKPVYRAYRIKMENPNHAF 845

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
              +  W    T AE+I  + + EG I++  R+  E   +L  AA+ +G   L ++  A 
Sbjct: 846 CGELALWLNDKTLAEIIDASPLSEGVIVKYIRKATEICTELIIAARILGNPRLSQEVEAV 905

Query: 940 SESLRRGIMFSNSLY 954
           +E L+RGI+F+ SLY
Sbjct: 906 NEKLKRGIVFTPSLY 920


>gi|359144147|ref|ZP_09178216.1| helicase [Streptomyces sp. S4]
          Length = 935

 Score =  348 bits (893), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 271/937 (28%), Positives = 451/937 (48%), Gaps = 90/937 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQLDACRSLEEGKGVLVAAPTGSGKTIVGEFAVHLALGQSKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++P+A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYADLAKRYGADKVGLLTGDNSVNPDAPVVVMTTEVLRNMLYAGSQTLTGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LPP++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPPSVTLVSLSATVSNAEEFGDWLDTV-RGDTDVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQ---------FREDNFVKLQDTFLKQKIGGRRENGKA 301
            PL  +V  + G  +Y + +E E           R       + T  K +  GR      
Sbjct: 211 VPLFQHV--LAGRRMYDLFEEGEGAKKAVNPDLLRMARLESSRPTGPKDRRRGRNMREAD 268

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEE 359
             R  +  S +      ++++ +      P I F FSR  CE        + L  N    
Sbjct: 269 RERERRQRSRTWTPSRPEVIERLDAENLLPAITFIFSRAGCEAAVQQCLYAGLRLNDDAA 328

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +  V ++ +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLV
Sbjct: 329 RSAVREIVEERTAAIPDEDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVEELFLRGLV 388

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           KA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  +
Sbjct: 389 KAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAV 448

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ 
Sbjct: 449 VLWQRAMNPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVHQF-GRHRSRELLETSFAQFQA 507

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPERVL 596
           ++++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R  
Sbjct: 508 DRSVVGISRQVQRNEEGLEGYAASMTCHLGDFEEYGRLRRELKDRETELARQGAGQRRA- 566

Query: 597 YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG-----TLPS-RGGGYI------VPV 644
               +G L K+R G        +++V     AG+       LP+ R  G+        P 
Sbjct: 567 --EAAGALEKLRPGD-------IIHVPTGKYAGLALVLDPGLPAGRSNGHRGFDHHDGPR 617

Query: 645 QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG-----------LPKLNPV 693
            L L +     RL+      P++A   + +  +   +R PQ               L P 
Sbjct: 618 PLVLTAERQVKRLAAMDFPVPVEALDRMRVP-KSFNARSPQSRRDLASALRTRAGHLEPK 676

Query: 694 KDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM- 751
           +  K       D   +I  L   + AHP +   + E+  R  +R   +  + +QL+ ++ 
Sbjct: 677 RHRKGRSAAADD--REIARLRTAIRAHPCHGCDEREDHARWAERYHRLKRDTRQLERRIE 734

Query: 752 -RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
            R + I +  D + N   +L +LG++  + V +   R + L    D LL +E +  G + 
Sbjct: 735 GRTNTIARTFDRIVN---LLTELGYLRGNEVTEDGRRLSRLYGELD-LLASECLREGVWE 790

Query: 811 DLDHHQVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAE 856
            L   ++AA  S  +              P   +   +   + +   L  L+E    I++
Sbjct: 791 GLGPAELAACVSALVFEARQADDAVVPKLPSGAAKAALGEMVRIWGRLDALEEQ-HGISQ 849

Query: 857 IQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEF 916
            +   + E ++                Y W+ G     V++  ++  G  +R  +++ + 
Sbjct: 850 TEGVGQREPDLG----------FAWAAYMWASGKGLDAVLREAEMPAGDFVRWCKQVIDV 899

Query: 917 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           L Q+ AAA     V    +   A +++RRG++  +S+
Sbjct: 900 LGQIAAAAPEGSTVARSAR--KAVDAVRRGVVAYSSV 934


>gi|387594654|gb|EIJ89678.1| ATP-dependent DEAD/H RNA helicase [Nematocida parisii ERTm3]
          Length = 922

 Score =  348 bits (893), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 195/484 (40%), Positives = 283/484 (58%), Gaps = 26/484 (5%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D FQ+     + +++S+ V+AHTS+GKT +AEYA  +A     R+IYTSP+KALSN
Sbjct: 78  SFEPDNFQKQCFYYINKSQSIFVTAHTSSGKTLIAEYASYIAELHDTRMIYTSPIKALSN 137

Query: 134 QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
           QKYRE  Q+F  VG++TGD  ++  A CLVMTTEILR MLYRGS +L +V +++FDEIHY
Sbjct: 138 QKYREFSQKFSSVGILTGDAQINSTAKCLVMTTEILRNMLYRGSTILDDVEFIVFDEIHY 197

Query: 194 MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
           + D+ERGVVWEE II LP  I ++FLSAT  NA     WI  +  +  +++ T+ R   L
Sbjct: 198 LGDKERGVVWEEVIIMLPRHISLIFLSATSPNAKDMCGWISTIKNKEMYLIGTEKRAVEL 257

Query: 254 QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM-------- 305
           +H ++      LY++  +  +F        Q+ +LK K  G  E  K   R         
Sbjct: 258 EHGIY--FRKELYMLT-QNHKFN-------QEEYLKAKNKGAVEIFKEKQRTIPALQKKT 307

Query: 306 --AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
             AK  + +       I + +++R   P++ F FS+   EQ       LD  T EEK  +
Sbjct: 308 VEAKKKAPTILETPIHIARDLIQRNLAPIVFFDFSKSRIEQSFSMCDSLDLTTAEEKSLI 367

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
                +A+  L + DR LP I  ++P L RG+ +HHSGLLP++KE++E+LF  G ++ LF
Sbjct: 368 RGFISDALLKLPKADRALPQITFVIPSLIRGVGMHHSGLLPILKEIIEMLFTTGALRVLF 427

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRY--IGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +TET AMGLNMPA+TVV    KK+  ++  Y  I  GEY QM+GRAGRRG D +G  II 
Sbjct: 428 STETLAMGLNMPARTVVIRTTKKYSPETRSYVDISVGEYTQMAGRAGRRGYDIKGTSIIE 487

Query: 482 VDEQ--MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
              Q  +  + L  +  G    + S F ++   IL L+ R +   + E +++ SF + + 
Sbjct: 488 CSGQEILPESLLVKLQTGTSMAIESNFYITARMILKLL-RVKS-VSIEEMVRFSFGKSKI 545

Query: 540 EKAL 543
           E+ +
Sbjct: 546 EQKI 549



 Score = 60.5 bits (145), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 16/195 (8%)

Query: 770 LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ--VAALASCFIPV 827
           L+ LG+ID    + LKG+ A   ++ + +L TE++ +    ++  H+  +  +   F   
Sbjct: 732 LRTLGYIDGLNNITLKGKIAYEFNSIECVLTTEVLLSPQIANMKTHELIIGLVGLTFF-- 789

Query: 828 DKSSEQINLRMELAKPLQQ--------LQESARKIAEIQNECKLEVNVDEYVESTVRPFL 879
               E+  L+ E   P ++        L  S   I EI +E K                 
Sbjct: 790 ----EKHQLKEEAEHPREEPRTEQIKILMPSLLIINEIVSELKPVYRAYRIKMENPNHAF 845

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
              +  W    T AE+I  + + EG I++  R+  E   +L  AA+ +G   L ++  A 
Sbjct: 846 CGELALWLNDKTLAEIIDASPLSEGVIVKYIRKATEICTELIIAARILGNPRLSQEVEAV 905

Query: 940 SESLRRGIMFSNSLY 954
           +E L+RGI+F+ SLY
Sbjct: 906 NEKLKRGIVFTPSLY 920


>gi|374991250|ref|YP_004966745.1| ATP-dependent RNA helicase [Streptomyces bingchenggensis BCW-1]
 gi|297161902|gb|ADI11614.1| ATP-dependent RNA helicase [Streptomyces bingchenggensis BCW-1]
          Length = 942

 Score =  348 bits (893), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 283/939 (30%), Positives = 464/939 (49%), Gaps = 87/939 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FELDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFELDPFQIEACKALEAGKGVLVAAPTGSGKTIVGEFAVHLALTQGRKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYTDLVKRYGADRVGLLTGDNSINSEAPVVVMTTEVLRNMLYAGSQSLLGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS-GRMAKGG 309
            PL  +V    G  +Y + +EK   + D  V  ++         R EN + S GR  + G
Sbjct: 211 VPLWQHVL--AGRRMYDLFEEKSG-QGDGQVGRREVNPDLVRLARMENTRPSFGRDKRRG 267

Query: 310 SGS-----------GGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSK 351
             +             S I+     ++++ +      P I F FSR  CE        + 
Sbjct: 268 RNNMREADRERERRQRSRIWTPGRPEVIERLDAEGLLPAITFIFSRAGCEAAVQQCLYAG 327

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           L  N +  +  V  + +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE
Sbjct: 328 LRLNDEAARARVRSIVEERTSGIPDEDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVE 387

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
            LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG
Sbjct: 388 ELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRG 447

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G  +++    M+   L  +   +  PL S+F+ SY   +NL+S+  G   +  +++
Sbjct: 448 IDVEGHAVVLWQRAMDPAALAGLAGTRTYPLRSSFKPSYNMAVNLVSQF-GWHRSRELLE 506

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSE 588
            SF QFQ +KA+  I ++V + EE      AS    +    EY +L+ D+   E +L  +
Sbjct: 507 TSFAQFQADKAVVGISRQVQRNEEGLRGYRASMTCHLGDFDEYARLRRDLKDRETELAKQ 566

Query: 589 ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV------GTLPSRGGGY-- 640
                RV     +  L K+R G        V++V     AG+      G    R GG+  
Sbjct: 567 GVAQRRV---AAADALEKLRPGD-------VIHVPTGKYAGLALVLDPGLPAGRTGGHRG 616

Query: 641 ------IVPVQLPL---ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL- 690
                   P+ L +   +  L+ I   VP  + PL+ R  I    +    R PQ    L 
Sbjct: 617 LEYHDGPRPLVLTVERQVKRLAAIDFPVP--VEPLE-RMRI---PRSFNPRSPQSRRDLA 670

Query: 691 ---------NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEV 740
                    + ++  + E     D   +I  L   L AHP +   + E+  R  +R   +
Sbjct: 671 SALRTKAGHHEMRRHRKERSAAAD-DTEIARLRATLRAHPCHGCDEREDHARWAERYHRL 729

Query: 741 NHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDEL 798
             + +QL+ ++  R + I +  D +     +L +LG++  + V     R A L    D L
Sbjct: 730 LRDTRQLERRIEGRTNTIARTFDRI---CALLSELGYLSGEEVTDDGKRLARLYGELD-L 785

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQESAR---KI 854
           L +E +  G +  L   ++AA AS  +   ++++  +  ++   +    L E  R   ++
Sbjct: 786 LASECLREGVWEGLAPAELAACASALVYEARAADDAMPPKLPAGRAKGALGEMVRIWGRL 845

Query: 855 AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLD 914
             ++++ K++   +   +           Y W+ G    E+++  D+  G  +R  +++ 
Sbjct: 846 DALEDDHKIK-QAEGVGQREPDLGFAWAAYRWASGHGLDELLREVDMPAGDFVRWCKQVI 904

Query: 915 EFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + L Q+  AA A G V    + A   ++L RG++  +S+
Sbjct: 905 DVLGQIAVAAPAGGTVARAARRAV--DALLRGVVAYSSV 941


>gi|50954553|ref|YP_061841.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951035|gb|AAT88736.1| ATP-dependent RNA helicase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 811

 Score =  348 bits (892), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 200/523 (38%), Positives = 310/523 (59%), Gaps = 19/523 (3%)

Query: 75  FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQ-RVIYTSPLKALSN 133
           F+LDPFQR +  CLE   SVLV+A T AGKT VAE+A+ +A R    +V YT+P+KALSN
Sbjct: 34  FDLDPFQREACTCLENGRSVLVAAPTGAGKTIVAEFAVFLAMRQANAKVFYTTPMKALSN 93

Query: 134 QKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QK++E    +  + VGL+TGD  ++ +A  +VMTTE+LR MLY  S++L ++A+V+ DE+
Sbjct: 94  QKFQEFQDTYGPESVGLLTGDTNINSHARIVVMTTEVLRNMLYADSDLLGDLAYVVMDEV 153

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE II LPPA++MV LSAT+SNA +F +W+  + +    VV ++ RP 
Sbjct: 154 HYLADRFRGAVWEEVIIHLPPAVRMVSLSATVSNAEEFGDWLQAV-RGDTDVVVSEERPV 212

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSG 311
           PL+ ++     S L  + D        N V  +   + +  GGR  + +    + +  S 
Sbjct: 213 PLEQHILM--RSKLIDLFDSS-GLAAANRVNPELVQMARS-GGRVLSSRQRRDIGRYHSR 268

Query: 312 SGGSDIFK-----IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVE 364
            G  D F+     IV+++ E    P I F FSR  C+        + +    Q E+D + 
Sbjct: 269 GGRPDSFRMNRAEIVRLLDEHNLLPAIFFLFSRNGCDAAVRQTLRAGVRLTEQRERDDIR 328

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
            + +     L +ED  +      L  L+ G+A HH+G+LP  KE+VE LF+  LVK +FA
Sbjct: 329 SIVEERCRTLMDEDLAVLGYWEWLEGLEHGVAAHHAGMLPAFKEVVEELFRRKLVKVVFA 388

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A+G+NMPA+TVV   ++K++G+S   I  GEY Q++GRAGRRG D  G  +I  ++
Sbjct: 389 TETLALGINMPARTVVLEKLEKFNGESRVPITPGEYTQLTGRAGRRGIDVEGNSVIQWED 448

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            ++  ++  +   +  PL S+FR +Y   +NL+ +   Q T E ++++SF QFQ ++A+ 
Sbjct: 449 GLDPQSVASLASRRSYPLNSSFRPTYNMAVNLIDQFGRQRTRE-ILESSFAQFQADRAVV 507

Query: 545 DIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKK 584
           D+ +KV + EE  A  + +    +    EY  ++ ++  LE+K
Sbjct: 508 DLARKVRQQEESLAGYEKAMTCHLGDFREYSGVRRELTDLERK 550



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 114/252 (45%), Gaps = 18/252 (7%)

Query: 710 IEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNR 766
           + EL  ++  HP ++  D E   R  +R  ++  E   L +++  R   + K  D +   
Sbjct: 569 LTELRKRMREHPCHRCSDREQHARWAERWWKLKRETDLLSAQIQSRTGAVAKVFDRV--- 625

Query: 767 SRVLKKLGH-IDADGVVQLK--GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC 823
           S VL +LG+ +  DGV +L   GR    I    +LLV E +  GT+ +LD   +AA+A  
Sbjct: 626 SDVLDELGYLVVEDGVTKLTVHGRTLKRIYGERDLLVAECLRRGTWKELDAPSLAAMACA 685

Query: 824 FIPVDKSSEQINLRMELAKP--LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMD 881
            +   +  + +     L +   L  L ++    A + +  +          ST     M 
Sbjct: 686 LVFEPRRDDGLGHDRALPRGAFLPALDKTTDLWARLDDRERENRLPGSEPPSTALALAM- 744

Query: 882 VIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASE 941
             + W++G+    V++  D+  G  +R  ++  + L+QL   AQ     NL +    A E
Sbjct: 745 --HQWARGSGLDAVLREADMAAGDFVRWTKQTIDLLDQLSLVAQG----NLGRTARQALE 798

Query: 942 SLRRGIMFSNSL 953
           ++RRGI+  +S+
Sbjct: 799 AIRRGIVAYSSV 810


>gi|220909112|ref|YP_002484423.1| DSH domain-containing protein [Cyanothece sp. PCC 7425]
 gi|219865723|gb|ACL46062.1| DSH domain protein [Cyanothece sp. PCC 7425]
          Length = 889

 Score =  348 bits (892), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 276/900 (30%), Positives = 463/900 (51%), Gaps = 94/900 (10%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + F LD FQ+ ++A LE ++SV+V A T +GKT + EYAI  A   ++RV YT+PLKALS
Sbjct: 19  FPFPLDTFQQEAIAALEADQSVVVCAPTGSGKTLIGEYAIYRALSRQRRVFYTTPLKALS 78

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  Q+F  + VGL+TGDV+++ +A  LVMTTEI R MLY G+ +      L  V 
Sbjct: 79  NQKLRDFRQQFGAEQVGLLTGDVSINRDAPILVMTTEIFRNMLY-GTPIGEVGTSLAGVE 137

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESII+ P AI++V LSAT++N+ Q  +WI  +H  P  ++
Sbjct: 138 VVVLDECHYMNDRQRGTVWEESIIYCPAAIQLVALSATIANSQQLTDWIDQVHG-PTRLI 196

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y++ RP PL+++       GL+ +++ +         KL     +Q+  GR+  G+ S R
Sbjct: 197 YSEQRPVPLRYHF--CTSKGLFPLLNRER-------TKLNAQLSQQR--GRQ--GRQSHR 243

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                      ++  ++  + ER   P I F FSRR C+Q    +S +      E  T++
Sbjct: 244 ------SEDIPNLTFVLSQLKERDMLPAIYFIFSRRGCDQAIAEVSSIQLLNPAE--TLQ 295

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
              Q  +D   ++  +  A   + PL + GIA HH+G+LP+ K LVE LFQ+GL+K +FA
Sbjct: 296 --LQIQIDHFLQQHPDQAASPYVKPLYQ-GIAAHHAGILPLWKGLVEELFQQGLIKVVFA 352

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A G+NMPA+T V +++ K     HR +   E++QM+GRAGRRG D  G    +V +
Sbjct: 353 TETLAAGINMPARTTVISSLSKRTDSGHRLLTPSEFLQMAGRAGRRGMDQLG---HVVTQ 409

Query: 485 QMEMNTLKD---MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF---- 537
           Q      ++   +      PL+S F  SY  +LNL+     +  A+ +++ SF Q+    
Sbjct: 410 QTPFEGGREAAYLATAGADPLISQFSPSYGMVLNLLQTHTLE-QAKELVERSFGQYLSTL 468

Query: 538 ---QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKL-----MSEI 589
                 +A+ D+  + ++++ + A++D +    + +Y KL+  + + E+ L      +E 
Sbjct: 469 HLAPQRQAIADLTAEFNQVQAKLATVDLNA---LKQYQKLREQVREEERLLKILQHQAEE 525

Query: 590 TRPERV---LYYLGSGRLIKVREG-GTDWGWGVVVNVVKKPSAG----VGTLPSRGGGYI 641
           TR +++   + Y   G L+ ++   G+       V V +  S+G    +G L      Y+
Sbjct: 526 TRRKQLALAIVYAPPGTLLSLKPAVGSPRTCLSAVVVSQVASSGQFPYLGCLGQDNHWYV 585

Query: 642 VP----VQLPLISTLSKI-RLSVPPDL--RPLDARQSILLAVQELESRFPQGLPKLNPVK 694
           V     V +     LS+   L  P +L  +P  +RQ+       + ++ P          
Sbjct: 586 VSLDQVVDIHAALPLSRFAALPFPAELPHKP-GSRQAGTAETTAIAAQIP---------- 634

Query: 695 DMKIEDP-EVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRD 753
           D ++E P EV+    ++E ++ KL +HPL+ +      R  QR   +  +I+  + K+ +
Sbjct: 635 DCEVEVPAEVLAQQGRLEAIQAKLTSHPLHLANPALLQRLQQRATRLQDQIRSRQEKL-N 693

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
            Q     +E     ++L+    ++      L G+ A  +   +EL +   + +G  + LD
Sbjct: 694 QQSHHHWEEFLCLLKILQTFRALEDLAPTPL-GQTAAALRGDNELWLGLAIASGELDGLD 752

Query: 814 HHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEY 870
            H  AA  +  +   P   S         +   L  L+   R++ + Q   + +V +  +
Sbjct: 753 PHHFAAACAALVTETPRSDSYTSYEPADAVDAALMALRPLRRQLFQAQR--RYQVVLPVW 810

Query: 871 VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
           +E    P L+ ++  W+ G  ++E+   T++ EG I+R  RR  +FL+QL  A Q   E+
Sbjct: 811 LE----PELVGLVEQWALGTEWSELCTHTNLDEGDIVRLLRRTLDFLSQLPHAPQISPEL 866


>gi|148272867|ref|YP_001222428.1| putative helicase [Clavibacter michiganensis subsp. michiganensis
           NCPPB 382]
 gi|147830797|emb|CAN01738.1| putative helicase [Clavibacter michiganensis subsp. michiganensis
           NCPPB 382]
          Length = 823

 Score =  347 bits (891), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 205/539 (38%), Positives = 313/539 (58%), Gaps = 31/539 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF-RDKQRVIYTSP 127
            A    F+LDPFQR +   LE   SVLV+A T AGKT VAE+A+ +A  R   ++ YT+P
Sbjct: 26  FASGLRFDLDPFQRAAAESLENGRSVLVAAPTGAGKTIVAEFAVYLAMQRPSAKIFYTAP 85

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY EL  E+   +VGL+TGD  ++  A  +VMTTE+LR MLY  S++L+++A+
Sbjct: 86  MKALSNQKYAELVAEYGPDEVGLLTGDTNVNSRARIVVMTTEVLRNMLYADSDLLRDLAF 145

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VI DE+HY+ DR RG VWEE II LP +++M+ LSAT+SNA +F +W+  +  +   V+ 
Sbjct: 146 VIMDEVHYLADRFRGAVWEEVIIHLPQSVRMISLSATVSNAEEFGDWLQAVRGE-TDVIV 204

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE-------N 298
           ++ RP PL+ +V        + +VD  +        ++    ++   GG RE        
Sbjct: 205 SEERPVPLEQHVIV-----RHRMVDLFDSSGLAATHRVNPELVRMTHGGGREAVRVRGGQ 259

Query: 299 GKASGRM-AKGGSGS--------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
           G + GR  A GGSG         G  D  ++V ++ ER   P I F FSR  C+     +
Sbjct: 260 GHSRGRTGAVGGSGKRAPGAWDRGRMDRPEVVALLEERNLLPAIFFIFSRAGCDAAVKQV 319

Query: 350 --SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             + +      E+D +  V +     L +ED  +      L  L+RG+A HH+G+LP  K
Sbjct: 320 LRAGVRLTHAHERDEIRAVVEERCRTLRDEDLAVLGYWEWLEGLERGVAAHHAGMLPAFK 379

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LFQ  LVKA+FATET A+G+NMPA+TVV   ++K++G++   +  GEY Q++GRA
Sbjct: 380 EVVEELFQRKLVKAVFATETLALGINMPARTVVLEQLEKFNGEARVPLTPGEYTQLTGRA 439

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +I   + ++   +  +   +  PL S+FR +Y   +NL+ +   + T E
Sbjct: 440 GRRGIDVEGHAVIQWKDGLDPQAVASLASRRTYPLNSSFRPTYNMAVNLIDQFGRERTRE 499

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEK 583
            V+++SF QFQ ++A+ D+ +KV   EE  A  + +    +    EY  L+ +++ LE+
Sbjct: 500 -VLESSFAQFQADRAVVDLARKVRTQEESLAGYEKAMVCHLGDFREYSGLRRELSDLER 557



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 58/257 (22%), Positives = 115/257 (44%), Gaps = 25/257 (9%)

Query: 709 QIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRD--SQIQKFRDELKN 765
           Q+ +L  ++ AHP +  +D E+  R  +R   +  +   L  ++R   + + K  D +  
Sbjct: 580 QLTDLRRRMKAHPCHACKDRESHARWAERWWRLKRQTDALGQQIRTRTNAVAKVFDRV-- 637

Query: 766 RSRVLKKLGHID--ADGVV--QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            + +L  LG++    DG V     GR    I    +LL+ E +    + DLD   +AA+A
Sbjct: 638 -TELLLSLGYLKRATDGQVAPTPNGRMLKRIYGDRDLLIAECLRTQVWVDLDPAALAAMA 696

Query: 822 SCFIPVDKSSE----QINL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
           +  +   +  E      NL R      L++ +E   ++ +++ E +L    D        
Sbjct: 697 ASLVYQPRRDEGDRNDRNLPRGAFRAALERTEEIWSRLDDVERERRLP-TTDPLSTGLCA 755

Query: 877 PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
           P     ++ W++G +   V+   D+  G  +R  ++  + L+QL      V +  + +  
Sbjct: 756 P-----MHRWARGGSLDAVLDEADLAAGDFVRWTKQTIDLLDQL----SVVADGPVSRNA 806

Query: 937 AAASESLRRGIMFSNSL 953
             A +S+RRGI+  +S+
Sbjct: 807 RTALDSIRRGIVAYSSV 823


>gi|395203776|ref|ZP_10394869.1| putative helicase [Propionibacterium humerusii P08]
 gi|422439199|ref|ZP_16516022.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA3]
 gi|422470686|ref|ZP_16547186.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA2]
 gi|422574487|ref|ZP_16650041.1| DEAD/DEAH box helicase [Propionibacterium acnes HL044PA1]
 gi|313837528|gb|EFS75242.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA2]
 gi|314927264|gb|EFS91095.1| DEAD/DEAH box helicase [Propionibacterium acnes HL044PA1]
 gi|314972734|gb|EFT16831.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA3]
 gi|328907862|gb|EGG27625.1| putative helicase [Propionibacterium humerusii P08]
          Length = 916

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 282/937 (30%), Positives = 452/937 (48%), Gaps = 101/937 (10%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SF+ D +Q  +   L+    +LV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFDPDDYQVKACQDLDDGAGILVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E + VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGEDR-VGLLTGDVTINSEAPVVVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPHVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPL-QHYVFPVGGSGLY-------------LVVDEKEQFREDNFVKLQDTFLKQKIG--- 293
            PL QH        GL+              +  E+ +F+ D+  + +    K K     
Sbjct: 191 VPLTQHVAVARHLHGLFDPHRPTEVNPELVSIAKEEARFQRDDSRRPRGRSGKGKRNVSY 250

Query: 294 GRRENGKAS----GRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
           G  + G AS    GR A+           ++V+ + +    P I+F FSR  C+     +
Sbjct: 251 GTGQFGGASATRRGRTARPRGPRNQPSRIQVVRSLHKANLLPAIIFVFSRSGCDAAVNQL 310

Query: 350 SKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
              D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPVIK
Sbjct: 311 LNTDLVLTSQQEARHLRRIAQLHGEGLTDEERRAVGWTHFVAAFERGIAAHHAGLLPVIK 370

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
            +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++GRA
Sbjct: 371 AIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTGRA 430

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  + G+  A 
Sbjct: 431 GRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-SMGRDKAR 489

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA------SGEAEVAEYHKLKLDIAQL 581
            ++++SF QFQ ++ L   G    +  +  A +DA       G+ +  EY +L+ +I +L
Sbjct: 490 DLLEHSFAQFQIDRRL---GGSTVRNRQTQAEIDAYLRAAHCGKGDFTEYARLRENIREL 546

Query: 582 --EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSR 636
             E+  + +  RP +V   L  L  G +I V   G   GW VVV+         GT   R
Sbjct: 547 EHEQARLRKGERPSQVADSLSRLDPGDIIAV-PSGPHAGWVVVVD--------PGTHGKR 597

Query: 637 GGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQELES 681
           G     P  L +    + IRL                VP    P    Q+    + +   
Sbjct: 598 GQ---RPRPLVMTPDRAVIRLGHHDIDAPVTRVAGVKVPRHFHP--GNQADRRCLGKAFD 652

Query: 682 RFPQGL--PKLNPVK-DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRK 737
           R   GL  P   P + +M  E      L ++I++L  ++ AHP +   D E+  R  +  
Sbjct: 653 RVLDGLGEPVAQPRRVEMDAE------LADKIDKLRSQMKAHPCHSCPDRESHARFAEHA 706

Query: 738 AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGD 796
             ++   ++  +K R ++      + +    V++ LG++   G  V   GR    I +  
Sbjct: 707 MRLSRRSERELAKAR-AKSTSIATQFERIVLVMEALGYLGEGGQTVTDAGRMLSGIYSEL 765

Query: 797 ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
           +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +L     +  +  Q   R +  
Sbjct: 766 DLVTAEAIRRGVFDGLDFPQLAAVLSTIVHESRPGDRGHLHRMPDRKSEAAQSQLRAV-- 823

Query: 857 IQNECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRSAR 911
                + E+ + E      RP  +D+      Y W+ GA     I + D+  G  +R  R
Sbjct: 824 -----RAEIGLLERDHRIERPRDLDIGFAETSYAWAAGAGLE--IVLDDMSAGDFVRQVR 876

Query: 912 RLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           ++ +   Q+  A   VGE +L         +++RG++
Sbjct: 877 QVCDLAGQI--AHAGVGE-DLAHTCRQVVGAMQRGVV 910


>gi|428303828|ref|YP_007140653.1| DSH domain-containing protein [Crinalium epipsammum PCC 9333]
 gi|428245363|gb|AFZ11143.1| DSH domain protein [Crinalium epipsammum PCC 9333]
          Length = 896

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 270/901 (29%), Positives = 444/901 (49%), Gaps = 106/901 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + F+LD FQ  ++A  +   SV+V A T +GKT + EYAI  A     RV YT+PLKALS
Sbjct: 16  FPFDLDEFQYQAIAAFDAGRSVVVCAPTGSGKTLIGEYAIYRALSRGGRVFYTTPLKALS 75

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLY--RGSEV---LKEVAW 185
           NQK R+  Q+F +  VGL+TGD++++  A  LVMTTEI R MLY  R  EV   L  V  
Sbjct: 76  NQKLRDFRQQFGNDMVGLLTGDISVNREAPILVMTTEIFRNMLYGTRIGEVGTSLAHVET 135

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE HYM DR+RG VWEESII+ PP I++V LSAT+SN+     WI  +H  P  ++Y
Sbjct: 136 VVLDECHYMNDRQRGTVWEESIIYCPPEIQLVALSATVSNSQNLTAWISSVHG-PTELIY 194

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRM 305
           +DFRP PLQ Y       GL+ ++D+ ++             +  ++  +R++  + G+ 
Sbjct: 195 SDFRPVPLQFYFG--NPKGLFPLLDDYKKK------------INPRLIAKRKSDTSKGKG 240

Query: 306 AKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQ 365
           A+  + + G     IV  + +R   P I F FSRR C+Q    +  L    + E   ++Q
Sbjct: 241 ARPETPALGF----IVNQLAQRDMLPAIYFIFSRRGCDQAVEELKGLMLVNRAETAELKQ 296

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
              + +   N +      +E   PL  RGIA HH+G+LP  K LVE LF  GLVK +FAT
Sbjct: 297 RIDDFL-ARNPDAGRAGQVE---PLY-RGIAAHHAGILPAWKGLVEELFGLGLVKVVFAT 351

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A G+NMPA+T V + + K   D HR + + E++QM+GRAGRRG D  G  + +    
Sbjct: 352 ETLAAGINMPARTTVISTLSKRTDDGHRLLKASEFLQMAGRAGRRGMDTTGYVVTLQTRF 411

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
                   +      PLVS F  SY  +LNL+   E +  A+ +++ SF Q+   + L  
Sbjct: 412 EGAKEAAYLATASAEPLVSQFTPSYGMVLNLLQTHELE-EAQELVERSFAQYTASQHLKP 470

Query: 546 IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL-GSGRL 604
             + ++ L  E   +D+  E        + +++ Q  +KL   +    R+L  L      
Sbjct: 471 QVQAIADLNRELQLIDSLLE-------PVNIELLQKYEKLQGRLKEERRLLKILQHQAEE 523

Query: 605 IKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTL------------ 652
           ++ +E        + + +++   A  GT+ S  G Y VPV  PL + L            
Sbjct: 524 VQAKE--------ISLGLLQ---ANPGTILSLKGKY-VPVSSPLPAVLVAKVAGAGQFPY 571

Query: 653 -------SKIRLSVPPDLRPLDARQSIL---LAVQELE------------------SRFP 684
                  +K  +    D+  L  +   L   L V+++E                  S   
Sbjct: 572 LLCLGKDNKWYVVTTNDVVGLHGKLPQLPSNLGVKDIEFLESPPELTFKPGQSRSGSNVT 631

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQ-RKAEVNHE 743
             +  + P   +    PEV+  + Q+E L+ ++  HP+ +  + + +   Q R+  +  E
Sbjct: 632 DAIATMIPHASVPAVAPEVIAQLKQVEMLKAEVDHHPIWQWGNPSTLLKRQSRRMGIQEE 691

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
           I + + +M  +++     E  +   +L+++G +       L G AA  I   +EL +   
Sbjct: 692 ICK-RQEMLQAKLAHHWQEFTDLIEILRRMGALQDLNPTPL-GEAAAAIRGDNELWLGLA 749

Query: 804 MFNGTFNDLDHHQVAALASCFIPVDK----SSEQINLRMELAKPLQQLQESARKIAEIQN 859
           + +G  ++LD H +AA A C +  +     S    +L  +  + L +++   R++ ++Q 
Sbjct: 750 ITSGALDELDPHHLAA-AVCALVTETARPDSWTNYSLSNQAVEALTEVRNVRRQLFQLQR 808

Query: 860 ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
             + +V +  ++E      L+ ++  W+ G  + ++   T++ EG I+R  RR  + L+Q
Sbjct: 809 --RYQVTLPVWLEYE----LVGIVEQWALGVEWFDLCGNTNLDEGDIVRMLRRTVDLLSQ 862

Query: 920 L 920
           +
Sbjct: 863 I 863


>gi|386839157|ref|YP_006244215.1| helicase [Streptomyces hygroscopicus subsp. jinggangensis 5008]
 gi|374099458|gb|AEY88342.1| helicase [Streptomyces hygroscopicus subsp. jinggangensis 5008]
 gi|451792449|gb|AGF62498.1| helicase [Streptomyces hygroscopicus subsp. jinggangensis TL01]
          Length = 950

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 277/923 (30%), Positives = 446/923 (48%), Gaps = 62/923 (6%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 47  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALS 106

Query: 133 NQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 107 NQKYADLCRRYGTGKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    + V+L      +     R  G+A     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEGEGHKKAVNPDLVRLARMEATRPSYQDRRRGRAMREADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N +E +
Sbjct: 284 ERERRQRSRVWTPGRPEVIERLDSEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEAR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           + V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 EQVRALVEERTASIPTEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGMSPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSE-----ITRP 592
           K++  I ++V + EE  A   AS    +    EY +L+ ++   E +L  +         
Sbjct: 523 KSVVGISRQVQRNEEGLAGYKASMTCHLGDFEEYARLRRELKDRETELARQGAAERRAEA 582

Query: 593 ERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTL 652
              L  L  G +I V  G         + +V  P    G      G        PL+ T 
Sbjct: 583 AVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFDHHDGPRPLVLTA 637

Query: 653 SK-----IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN----------PVKDMK 697
            +       +  P  + PLD R  I    +    R PQ    L           P +  +
Sbjct: 638 ERQVKRLASMDFPVPVEPLD-RMRI---PKTFNPRSPQSRRDLASALRTKAGHIPPERAR 693

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDS 754
            +  +  D   +I  L   L AHP +   D E+  R  +R   +  +  QL+ ++  R +
Sbjct: 694 KKRSQAAD-DREIARLRTALRAHPCHGCNDREDHARWAERYHRLLRDTSQLERRIEGRTN 752

Query: 755 QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
            I +  D +     +L +L ++  D V +   R A L    D LL +E +    +  L  
Sbjct: 753 TIARTFDRIVA---LLTELDYLRGDEVTEHGKRLARLYGELD-LLASECLRERVWEGLAP 808

Query: 815 HQVAALASCFIPVDK-SSEQINLRMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYVE 872
            ++AA  S  +   +   + +  ++   K    L E  R    +   E +  +N  E V 
Sbjct: 809 AELAACVSALVYEARVGDDAMAPKLPSGKAKAVLGEMVRIWGRLDGLEEEFRINQTEGV- 867

Query: 873 STVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEV 930
               P L      Y W+ G    EV++  ++  G  +R  +++ + L Q+ AAA A G  
Sbjct: 868 GQREPDLGFAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQISAAAPAEGS- 926

Query: 931 NLEKKFAAASESLRRGIMFSNSL 953
            + K    A + L RG++  +S+
Sbjct: 927 TVAKAARKAVDQLLRGVVAYSSV 949


>gi|152965851|ref|YP_001361635.1| DEAD/DEAH box helicase [Kineococcus radiotolerans SRS30216]
 gi|151360368|gb|ABS03371.1| DEAD/DEAH box helicase domain protein [Kineococcus radiotolerans
           SRS30216]
          Length = 931

 Score =  347 bits (890), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 279/939 (29%), Positives = 441/939 (46%), Gaps = 85/939 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           + A T  FELD FQ  +   LE    VLV+A T AGKT V E+A  +A R  ++  YT+P
Sbjct: 24  QFADTVGFELDGFQLQACRALEAGRGVLVAAPTGAGKTVVGEFAAHLALRTGRKAFYTTP 83

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY EL +      VGL+TGD +++  A  +VMTTE+LR MLY GS +L  + +
Sbjct: 84  IKALSNQKYTELVERHGPGAVGLLTGDNSVNGEAPVVVMTTEVLRNMLYAGSSLLDGLGY 143

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP  + +V LSAT+SNA +F  W+  + +    VV 
Sbjct: 144 VVMDEVHYLADRSRGAVWEEVIIHLPADVLVVSLSATVSNAEEFGAWLDTV-RGDTEVVV 202

Query: 246 TDFRPTPL-QHYVFPVGGSGLY---------------------------LVVDEKEQFRE 277
           ++ RP PL QH      G+ LY                           LV   ++Q R 
Sbjct: 203 SEHRPVPLWQHLAV---GTRLYDLFTDPDGDPLEGDEGSLVPGAIVNPELVAMSRQQLRT 259

Query: 278 DNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSF 337
           D          ++        G     + +  S +      +I+  +      P I F F
Sbjct: 260 DRLAGPGGRGRRRGQQRPGPGGSRPPGIGRPASRA------QILDTLDAAGLLPAITFIF 313

Query: 338 SRRECEQHAMSMSK--LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SR  C+          L   T EE   +  V +     +   D  +      L  L+RG+
Sbjct: 314 SRAGCDAAVEQCVAWGLRLTTPEEGRRIRAVAEERCAEIPSSDLAVLGYWEWLEGLERGL 373

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
           A HH+GLLPV KE VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G +H  +
Sbjct: 374 AAHHAGLLPVFKETVEHLFAAGLVKAVFATETLALGVNMPARSVVLERLVKWNGQTHVDV 433

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             GEY Q++GRAGRRG D  G  +++  +Q +   +  +   +  PL S+FR +Y   +N
Sbjct: 434 TPGEYTQLTGRAGRRGIDVEGHAVVLWSQQTDPEAVAGLASRRTFPLRSSFRPTYNMAVN 493

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYH 572
           L+ +  G+  A  +++ SF QFQ ++A+    +++   +E       +      +  EY 
Sbjct: 494 LVEQV-GRERARDILETSFAQFQADRAVVGQAQQIKNQQEALRGYQQAMTCHLGDFGEYF 552

Query: 573 KLKLDIAQLEKKL-----MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
            ++  I + EK L      S  +     +  L  G ++K+  GG    +GVV+++V  P 
Sbjct: 553 AIRQAITEREKDLSRSGAASRRSEARASVGNLSRGDVVKL-PGGRRSTFGVVLDLV--PG 609

Query: 628 AGVGTLPSRGGGYIVPVQLPLISTLSKIRLSVP--PDLR---PLDARQSILLAVQELESR 682
            G      R     +  Q   + T+     S P  P  R   P D         ++L S 
Sbjct: 610 KGFDGPSPR-----ILSQDRQVRTIDTDEFSGPVEPVTRVRIPKDFNWRSPQERRDLASS 664

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVN 741
               L ++      +           +++ L  +L AHP +  S+ E   R   R+ ++ 
Sbjct: 665 LRNALAEVGGGDVPRQRRTSTAAEDRELQALRERLRAHPCHGCSEREEHARWAVREEKLR 724

Query: 742 HEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGV-VQLKGRAACLIDTGDEL 798
            + Q L+ K+  R   I +  D + +   +L +LG++ ADG+ V  +GR    I+   +L
Sbjct: 725 RDTQGLQRKIEGRTGTIARTFDRVCD---LLAELGYLSADGLSVTDEGRTLRRINAETDL 781

Query: 799 LVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ 858
           LV + + +G ++ L    +AA  S  +   +       R E  +P +  + +   IA   
Sbjct: 782 LVAQCLRHGAWSGLSPADLAAAVSTLVHESR-------RDEGGRPDRIPRRAEAAIATTH 834

Query: 859 N-ECKLEVNVDEYVESTVR---PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLD 914
                L    D +     R   P L   ++ W+ G    EV++  D+  G  +R  ++L 
Sbjct: 835 RLWSDLTDREDHHKVPATREPDPGLAWAVHRWASGHRLDEVLREADLAAGDFVRRCKQLV 894

Query: 915 EFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + L+Q+ AA+   G   +     A  +++RRG++   SL
Sbjct: 895 DLLDQVGAASTDPG---VRSAARAGVDAVRRGVVAHTSL 930


>gi|434392251|ref|YP_007127198.1| DSH domain protein [Gloeocapsa sp. PCC 7428]
 gi|428264092|gb|AFZ30038.1| DSH domain protein [Gloeocapsa sp. PCC 7428]
          Length = 892

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 279/889 (31%), Positives = 446/889 (50%), Gaps = 101/889 (11%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           + + + F+LD FQ  ++  L  N SV+V A T +GKT + EYAI  A   ++RV YT+PL
Sbjct: 11  LERIFPFQLDEFQLAAIRALNANRSVVVCAPTGSGKTLIGEYAIYRALSRRKRVFYTTPL 70

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------L 180
           KALSNQK R+    F    VGL+TGD +++ +A  +VMTTEI R MLY G+ +      L
Sbjct: 71  KALSNQKLRDFRDRFGADMVGLLTGDASINRDAPIVVMTTEIFRNMLY-GTPIGEVGTSL 129

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
            +V  V+ DE HYM DR+RG VWEESII+ P  I++V LSAT++N+ Q  +WI  +H  P
Sbjct: 130 VDVEAVVLDECHYMNDRQRGTVWEESIIYCPSTIQLVALSATIANSQQLTDWINQVHG-P 188

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK 300
             ++Y++FRP PL+ Y       GL+ ++D                  K KI  R +   
Sbjct: 189 TELIYSEFRPVPLEFYF--CNPKGLFPLLDNS----------------KSKINPRLKPKP 230

Query: 301 ASG--RMAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
            SG    A+GG  +G       +   +  +  +   P I F FSRR C+Q   ++     
Sbjct: 231 GSGDASQARGGRRNGARLESPSLEYTISRLAAKDMLPAIYFIFSRRGCDQAVANLEMSLV 290

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
           N+ E     +Q+  +     N E      IE     L RGIA HH+G+LP  K LVE LF
Sbjct: 291 NSAEAAQLRQQI--DEFLARNPEAGRAGQIEP----LYRGIAAHHAGILPTWKGLVEELF 344

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
           Q+GL+K +FATET A G+NMPA+T V + + K     HR +   E++QM+GRAGRRG D 
Sbjct: 345 QQGLIKVVFATETLAAGINMPARTTVISTLSKRTDRGHRLLNPSEFLQMAGRAGRRGMDK 404

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  + +            +   +P PLVS F  SY  +LNL+     +  A  +I+ SF
Sbjct: 405 IGHVVTLQTPFEGAKEAAYLATAQPDPLVSQFTPSYGMVLNLLQTHTLE-EARELIERSF 463

Query: 535 HQF--------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLM 586
            Q+         YE +L  +  +V+++E +  S+D     +VA+Y KL+  I ++E++L+
Sbjct: 464 GQYLATLYLKPHYE-SLAHLQAQVAQIEAQLESIDME---QVAKYEKLRQRI-KVERQLL 518

Query: 587 SEI------TRPERV---LYYLGSGRLIKVREGGTDWGWGV-VVNVVKKPSAG----VGT 632
             +       R E++   L +  SG L+ +R         +  V V K P AG    +  
Sbjct: 519 KTLHEQAQEARVEQLGLTLSFAVSGTLLSLRGKHVPTATPIPAVLVAKTPGAGQAPYLVC 578

Query: 633 LPSRGGGYIVPVQ--LPLISTLSKIRLS---VPPDLRPLDARQSILLAVQELESRFPQGL 687
           L      Y+V     + L + L ++ L+   +PP   PL   QS     QE  +   + +
Sbjct: 579 LGQDNRWYVVMTSDVVDLYAELPRLELASDLLPPAEMPLKPGQS-RRGNQETVA-IARQI 636

Query: 688 PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQL 747
           P    V  + I  PEV+    ++  LE +L AHP++KS  +N     +R+    ++I QL
Sbjct: 637 PD---VAQLNIA-PEVLAQQAKVAALEAQLEAHPVHKS--DNPATILKRR----NKILQL 686

Query: 748 KSKMRDSQI------QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
           ++++ + Q       Q   +E  +   +L++ G ++      L G+ A  I   +EL + 
Sbjct: 687 QAEIVERQAELSQLSQHHWEEFLHLIEILQRFGCLNELVPTHL-GQVAAAIRGDNELWLG 745

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSE---QINLRMELAKPLQQLQESARKIAEIQ 858
             + +G F+ LD H +AA  +  +  +   +   +  L  E+ + L  L+   R++ ++Q
Sbjct: 746 LALSSGEFDQLDPHHLAAAIAALVTENTRPDSWVRYTLASEVEEALAGLRSIRRQLFQLQ 805

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
              +  V    ++E      L+ ++  W+ G  ++E+   T + EG ++
Sbjct: 806 R--RYNVAFPIWLEYD----LVALVEQWALGVEWSELCANTSLDEGDVV 848


>gi|378756461|gb|EHY66485.1| ATP-dependent DEAD/H RNA helicase [Nematocida sp. 1 ERTm2]
          Length = 923

 Score =  347 bits (889), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 286/478 (59%), Gaps = 13/478 (2%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D FQ+     + +++S+ V+AHTS+GKT +AEYA  +A     R+IYTSP+KALSN
Sbjct: 78  SFEPDNFQKQCFYYINKSQSIFVTAHTSSGKTLIAEYASYIAELHDTRMIYTSPIKALSN 137

Query: 134 QKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHY 193
           QKY+E  Q+F  VG++TGD  ++  A CLVMTTEILR MLYRGS +L +V +++FDEIHY
Sbjct: 138 QKYKEFSQKFASVGILTGDAQINGTAKCLVMTTEILRNMLYRGSTILDDVEFIVFDEIHY 197

Query: 194 MKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPL 253
           + D+ERGVVWEE II LP  I ++FLSAT  NA    +WI  +  +  +++ T+ R   L
Sbjct: 198 LGDKERGVVWEEVIIMLPRHISLIFLSATSPNAKDMCQWISVIKNKEMYLIGTEKRAVEL 257

Query: 254 QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT----FLKQKIGGRRENGKASGRMAKGG 309
           +H V+    + L+++  + + F  + ++K + T      K+K        K     AK  
Sbjct: 258 EHGVY--FRNNLHMLT-QNQVFSHEEYMKAKKTGAAEIFKEKQRSSPVLLKKPVVEAKKR 314

Query: 310 SGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQN 369
           + +       I + ++++   P++ F FS+   EQ       LD  T EEK  + +   +
Sbjct: 315 APNELETPINIARDLIQKNLAPIVFFDFSKSRIEQSFSMCDSLDLTTSEEKTLIREFIVD 374

Query: 370 AVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFA 429
           A+  L + DR LP I  ++P L RG+ +HHSGLLP++KE++E+LF  G ++ LF+TET A
Sbjct: 375 ALQKLPKSDRELPQINFVVPNLIRGVGMHHSGLLPILKEIIEMLFTTGALRILFSTETLA 434

Query: 430 MGLNMPAKTVVFTAVKKWDGDSHRY--IGSGEYIQMSGRAGRRGKDDRGICIIMV--DEQ 485
           MGLNMPA+TVV   +KK+  ++  Y  I  GEY QM+GRAGRRG D +G  II     E 
Sbjct: 435 MGLNMPARTVVIRTIKKYSPETRSYVDINVGEYTQMAGRAGRRGYDIKGTSIIECTGQEL 494

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
           +    L  +  G    + S F ++   IL L+ R +   + E +++ SF + + E+ +
Sbjct: 495 LPEALLVKLQTGTAMAIESNFYITARMILKLL-RVKS-VSIEEMVRYSFGKSKVEQQM 550



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 94/195 (48%), Gaps = 6/195 (3%)

Query: 765 NRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQ--VAALAS 822
           N    L+ LG+ID    +++KG+ A   ++ + +L TE++ +     +  H+  +  +  
Sbjct: 728 NYIMFLRSLGYIDELNNIKMKGKIAYEFNSIECVLTTEVLLSPLIAGMKTHELIIGLVGL 787

Query: 823 CFIPVDKSSEQINLRMELAKP--LQQLQESARKIAEIQNECKLEVNVDEY-VESTVRPFL 879
            F    +  E+     E  +   ++ L  +   I+EI  + +      +  +E     F 
Sbjct: 788 TFFEKHQLKEEAEYAREEPRTEQIRILMPAISIISEIVKDLRPTYKAYKIKIEQPNHAFC 847

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
            + +  W +G + AE+I  + + EG I++  R+  E   +L  AA+ +G   L ++  A 
Sbjct: 848 GE-LALWLQGKSLAEIIDASPLSEGVIVKYVRKATEICTELSIAAKILGNPKLSQEIDAV 906

Query: 940 SESLRRGIMFSNSLY 954
           +E L+RGI+F+ SLY
Sbjct: 907 NEKLKRGIVFTPSLY 921


>gi|317968960|ref|ZP_07970350.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. CB0205]
          Length = 936

 Score =  347 bits (889), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 275/921 (29%), Positives = 451/921 (48%), Gaps = 102/921 (11%)

Query: 55  AIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAM 114
           ++ GT A       + + + F LD FQ  ++  L +  SV+VSA T +GKT + EYAI  
Sbjct: 6   SVPGTPAQSTDVPPLEQLFPFSLDDFQLEAIEALNQGHSVVVSAPTGSGKTLIGEYAIHR 65

Query: 115 AFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGM 172
           A    Q+V YT+PLKALSNQK R+  ++F  + VGLMTGD+T++  AS +VMTTEI R M
Sbjct: 66  ALAHGQKVFYTTPLKALSNQKLRDFREQFGAERVGLMTGDLTVNREASIVVMTTEIFRNM 125

Query: 173 LY----RGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQ 228
           LY    +G + L +V  V+ DE HYM D +RG VWEESII  PP +++V LSAT++NA Q
Sbjct: 126 LYAEAEQGDDPLADVEAVVLDECHYMNDSQRGTVWEESIIHCPPVVQLVALSATVANAGQ 185

Query: 229 FAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL 288
             +WI  +H  P  +V +DFRP PLQ + F     GL+ +++++      N         
Sbjct: 186 LTDWIEQVHG-PTRLVMSDFRPVPLQ-FSF-CSAKGLHPLLNDEGTGLHPNC-----KVW 237

Query: 289 KQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS 348
           +   GGR   G  + R  +  +   G     +V  + ER+  P I F FSRR C++    
Sbjct: 238 RAPKGGRNRRGPKTPRPPQPEAPPLGF----VVAQMAEREMLPAIYFIFSRRGCDKAVRD 293

Query: 349 MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
           + K+   + +E+  ++      +    E  R+    + +L    RGIA HH+G+LP  KE
Sbjct: 294 LGKVCLVSPQEQARIQARLDVFMAATPEAVRDGGHDDALL----RGIAAHHAGVLPAWKE 349

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
           L+E LFQ+GLVK +FATET A G+NMPA++ V +A+ K     HR +   E++QM+GRAG
Sbjct: 350 LIEELFQQGLVKVVFATETLAAGINMPARSTVISALSKRTERGHRPLMGSEFLQMAGRAG 409

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAE 527
           RRG D +G  ++ V  + E       +   PA PLVS F  SY  +LNL+ R E    A+
Sbjct: 410 RRGLDSQGY-VVTVQSRFEGVREAGQLATSPADPLVSQFTPSYGMVLNLLQRYELS-KAK 467

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE----AEVAEYHKLKLDIA---- 579
            +++ SF ++     L +   ++S+L E+   L  + +     +  +Y K +  +     
Sbjct: 468 ELVERSFGRYLATLDLTEDEARISELREQLGDLSGTVQEVDWEDFEDYEKQRGRLREERR 527

Query: 580 -------QLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
                  Q E+ L  E+T     L +   G L+ ++         V   V+ +   G G 
Sbjct: 528 LLRILQQQAEETLAHELT---LALRFASEGTLVSLK--APVLRGRVTPAVIVEKHQGSGQ 582

Query: 633 LP------SRGGGYIVP----VQLPLISTLSKIRLSVPPDL-RPLDARQ------SILLA 675
            P            +VP    V L    T  +++  V P+L RP + R        + LA
Sbjct: 583 FPLLCCLTDENVWVLVPCSAVVSLHAELTCLQVKDVVVPELHRPGELRHGDQASGGLALA 642

Query: 676 VQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQ 735
           V  +  R     P+ +   +++ +        + + ELE  L  HP + + D  ++R  +
Sbjct: 643 VGHMARRHDMVTPQYDLAGEVQAQ-------AHLVRELELALELHPAHGAGDRKKLRKQR 695

Query: 736 -RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLK--GRAACLI 792
            R  E+  EI + + ++   +  +  +       +L+  G ++ D  +     GR    +
Sbjct: 696 FRMEELEAEIAE-RQRVLHFRANRHWETFLALIEILRFFGCLEGDEGLDPSEVGRTVAAL 754

Query: 793 DTGDELLVTELMFNGTFNDLDHHQVAALA-------------SCFIPVDKSSEQINLRME 839
              +EL +   + +G  ++LD   +AAL              S + P   + E ++    
Sbjct: 755 RGDNELWLGLALMSGHLDELDPADLAALLEAISTEVNRPDLWSGYPPPPAADEAMHDLRG 814

Query: 840 LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
           + + LQ+ QE+ + +  +  E +                LM +++ W+KG +++++I  T
Sbjct: 815 IRRELQRQQEAGKVVMPVWFEGE----------------LMGLVHAWAKGVSWSDLIANT 858

Query: 900 DIFEGSIIRSARRLDEFLNQL 920
            + EG ++R  RR  + L Q+
Sbjct: 859 SLDEGDVVRIMRRTVDLLAQI 879


>gi|148243022|ref|YP_001228179.1| superfamily II RNA helicase [Synechococcus sp. RCC307]
 gi|147851332|emb|CAK28826.1| Superfamily II RNA helicase [Synechococcus sp. RCC307]
          Length = 926

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 277/893 (31%), Positives = 431/893 (48%), Gaps = 81/893 (9%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           A  + F LD FQ  +VA L +  SV+VSA T +GKT + EYAI  A    QRV YT+PLK
Sbjct: 24  AALFPFPLDDFQLEAVAALNQGHSVVVSAPTGSGKTLIGEYAIHRALAHGQRVFYTTPLK 83

Query: 130 ALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYR----GSEVLKEV 183
           ALSNQK R+  ++F    VGLMTGD+T +  A  +VMTTEI R MLY     G + L+ V
Sbjct: 84  ALSNQKLRDFREQFGADRVGLMTGDLTANREAPIVVMTTEIFRNMLYAEIEDGDDPLEGV 143

Query: 184 AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHV 243
             V+ DE HYM D +RG VWEESII  PPAI++V LSAT++NA Q  +WI  +H  P  +
Sbjct: 144 EAVVLDECHYMNDSQRGTVWEESIIHCPPAIQLVGLSATVANAGQLTDWIEQVHG-PADL 202

Query: 244 VYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
           + +DFRP PLQ + F     GL+ ++++K      N        + +   G    GK   
Sbjct: 203 IVSDFRPVPLQ-FSF-CSAKGLHPLLNDKGTGLHPN------CKVWRAPKGHHRRGKNPK 254

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                    G    F + +++ ER+  P IVF FSRR C++    + K     ++E   +
Sbjct: 255 PPQPEPPSMG----FMVAQLV-ERQMVPAIVFLFSRRGCDKAVRDLLKASLVNEQEAREL 309

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               +       E  R+    E +L    RG+A HH+G+LP  KEL+E LFQ GLVK +F
Sbjct: 310 RLALEAFAQTSPEAVRDGVHAEALL----RGVAAHHAGVLPAWKELIEQLFQRGLVKVVF 365

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATET A G+NMPA+T V +A+ K   + HR + + E++QM+GRAGRRG D +G  + M  
Sbjct: 366 ATETLAAGINMPARTTVISALSKRTENGHRPLMASEFLQMAGRAGRRGLDTQGYVVTMQS 425

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKAL 543
               +     +    P PLVS F  SY  +LNL+ R E    A+ +++ SF ++    A 
Sbjct: 426 RFEGVREAGQLATSPPDPLVSQFTPSYGMVLNLLQRYELS-KAKELVERSFGRY---LAT 481

Query: 544 PDIGKKVSKLEEEAASLDASGEA-------EVAEYHKLKLDIA-----------QLEKKL 585
            D+ +  S++ E    L+  GE        +  +Y K +  +            Q E+ L
Sbjct: 482 LDLAEDQSRIAELRQQLELLGETVPDVPWEDFEDYEKQRGRLREERRLLRILQQQAEETL 541

Query: 586 MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP------SRGGG 639
             E+T     L +   G L+ ++        GV   V+     G G  P           
Sbjct: 542 AHELT---LALQFASPGTLVSLK--APQLRGGVAAAVIVDKLDGPGQFPLLQCLTEDNVW 596

Query: 640 YIVPVQ--LPLISTLSKIRLS--VPPDL-RPLDARQ------SILLAVQELESRFPQGLP 688
            +VP    + L + LS ++++    PD+ RP + R        + LAV  +  R     P
Sbjct: 597 IVVPCNAVVGLHAELSCLQVNDVASPDMERPGELRHGDQPSGGLALAVAAMAKRHDMHTP 656

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLK 748
           + +          EV D    +  LE +L  HP ++  D  Q++  +R+ E   E    +
Sbjct: 657 QYDLAG-------EVSDQAELVRALEEELELHPAHRWGDRKQLKKQRRRMEELEEEIAER 709

Query: 749 SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
            ++   +  +  +   +   +L+  G +D     ++ GR    +   +EL +   + +G 
Sbjct: 710 QQLLHRRANRHWETFLSLIEILQHFGCLDELDPTEV-GRTVAALRGDNELWLGLALMSGH 768

Query: 809 FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVD 868
            ++L     A LAS    +     + +L      P  Q +E+   +  ++ E   +  + 
Sbjct: 769 CDEL---PPADLASVLEAISTEVSRPDLWSAYPPP-PQAEETLHDLRGLRRELLRQQEIH 824

Query: 869 EYVEST-VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
             V      P LM ++  W++G +++++I  T + EG ++R  RR  + L QL
Sbjct: 825 AVVFPVWWEPDLMGLVKAWAEGESWSDLIANTSLDEGDVVRLLRRTVDLLAQL 877


>gi|302867438|ref|YP_003836075.1| DSH domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315506152|ref|YP_004085039.1| dsh domain-containing protein [Micromonospora sp. L5]
 gi|302570297|gb|ADL46499.1| DSH domain protein [Micromonospora aurantiaca ATCC 27029]
 gi|315412771|gb|ADU10888.1| DSH domain protein [Micromonospora sp. L5]
          Length = 926

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 280/931 (30%), Positives = 462/931 (49%), Gaps = 86/931 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK-------- 119
           E +    F+LD FQR +   LER   VLV A T AGKT V E+A+ +A R +        
Sbjct: 26  EFSLDLGFDLDDFQREACEALERGSGVLVCAPTGAGKTVVGEFAVHLALRGRPGGDAPAT 85

Query: 120 -QRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
            ++  YT+P+KALSNQKY +L   +  + VGL+TGD  ++ +A  +VMTTE+LR MLY G
Sbjct: 86  RRKCFYTTPIKALSNQKYHDLVDRYGAEQVGLLTGDNAINGDAPVVVMTTEVLRNMLYAG 145

Query: 177 SEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHL 236
           S  L+ +A+V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +FA+W+  +
Sbjct: 146 SATLEGLAYVVMDEVHYLADRFRGGVWEEVIIHLPESVTLVSLSATVSNAEEFADWLVTV 205

Query: 237 HKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL----QDTFLKQKI 292
             +   VV ++ RP PL  ++  VG     L  D     + D   +L    +DT  + ++
Sbjct: 206 RGETA-VVVSEHRPVPLWQHML-VGKRMFDLFHDADAARKHDVHPELLRYTRDTMRRLEL 263

Query: 293 GGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE---QHAMSM 349
           G  R  G   GR      G    DI   V  +      P I+F FSR  C+   Q  ++ 
Sbjct: 264 GEGRSAGPGGGRRGPRWRGPMRPDI---VDRLDREGLLPAILFIFSRAGCDAAVQQCLA- 319

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
           + L   + +E+  + +V ++ V  +  ED ++      L  L+RG+A HH+G+LP  KE+
Sbjct: 320 AGLRLTSPDERAEIRRVVESRVTAIPGEDLSVLGYWEWLDGLERGLAAHHAGMLPAFKEV 379

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
           VE LF  GLVKA+FATET A+G+NMPA+ VV   + K++G++H  +  GEY Q++GRAGR
Sbjct: 380 VEELFVRGLVKAVFATETLALGINMPARCVVLERLVKFNGEAHVDLTPGEYTQLTGRAGR 439

Query: 470 RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
           RG D  G  +++   + +   +  +   +  PL S+FR SY   +NL+  + G   A  +
Sbjct: 440 RGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVG-SVGAAPAREL 498

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG------EAEVAEYHKLKLDIAQLEK 583
           +++SF QFQ ++++  + ++V +  E   ++DA G        +  EY  L++ IA  E+
Sbjct: 499 LESSFAQFQADRSVVGLARQVQRNTE---TIDAYGVEAACHHGDFDEYFALRVAIADRER 555

Query: 584 KLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP---- 634
            +  +     +      L  L  G +I+V  G         + VV  P+ G    P    
Sbjct: 556 AIARQGQTQRKAAAVASLERLRVGDVIRVPSGRR-----AGLAVVLDPATGGFGEPRPLV 610

Query: 635 ---SRGGGYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
               R  G + P      +  L++IR+    + R   AR+ +  AV         G    
Sbjct: 611 LTQDRWAGRVTPGDFTTPAEVLTRIRVPKHFNHRSPAARRDLAAAV--------SGTGLD 662

Query: 691 NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKS 749
                      + V   +++ +L  +L AHP +   D E   R  +R+  +  + ++L+ 
Sbjct: 663 RHGGRRGGRSRQAVGEDHRLSQLRVELRAHPCHACPDREEHARWAERRRRLERDTEELRQ 722

Query: 750 KM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
           ++  R   + +  D +     +L   G++ ADG V   GR    I T  +LLV E +   
Sbjct: 723 RVSGRTGSLARTFDRIVA---LLTARGYLAADGEVTDAGRMLARIWTEADLLVAECLRRR 779

Query: 808 TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
            ++ L   ++AA  S  + V ++   ++ R  L  P   + ++  +  ++      ++  
Sbjct: 780 VWDGLSPAELAAAVS--VVVFEARRDVDERASL--PRGAVADAVDETLKLWG----DIEA 831

Query: 868 DEYVES---TVRPFLMDV--IYCWSKGATFAEVIQMTDIFEGSI-----IRSARRLDEFL 917
           DE       T  P L     IY W++G   A+V+      +G +     +R AR++ + L
Sbjct: 832 DEAARGLAVTREPDLGFAWPIYRWARGEALAKVLASGHQIDGEMPAGDFVRWARQVVDLL 891

Query: 918 NQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            Q+  +  A  E+    + A A  ++ RG++
Sbjct: 892 GQVADSGGASAELRGTARQAIA--AVNRGVL 920


>gi|84496432|ref|ZP_00995286.1| putative ATP-dependent RNA helicase [Janibacter sp. HTCC2649]
 gi|84383200|gb|EAP99081.1| putative ATP-dependent RNA helicase [Janibacter sp. HTCC2649]
          Length = 956

 Score =  346 bits (888), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 282/974 (28%), Positives = 464/974 (47%), Gaps = 128/974 (13%)

Query: 72  TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKAL 131
           + +F LD FQ      +ER + VLV+A T AGKT V E+A+ MA    ++  YT+P+KAL
Sbjct: 18  SLNFPLDDFQVQGCEAVERGQGVLVAAPTGAGKTIVGEFAVHMALATGRKAFYTTPIKAL 77

Query: 132 SNQKYRELH--QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFD 189
           SNQKY +L        VGL+TGD +++  A  +VMTTE+LR M+Y GS  L+ + +V+ D
Sbjct: 78  SNQKYHDLVAVHGVDKVGLLTGDSSVNGEAPVVVMTTEVLRNMVYAGSSTLQGLGFVVMD 137

Query: 190 EIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFR 249
           E+HY+ DR RG VWEE II LP +++++ LSAT+SNA +F +W+  +      VV ++ R
Sbjct: 138 EVHYLADRFRGAVWEEVIIHLPESVQVISLSATVSNAEEFGDWLAEVRGNHA-VVVSEHR 196

Query: 250 PTPLQHYVFPVGGSGLYLVVDEK-----------------------EQFREDNFVKLQDT 286
           P PL  ++  VG S   L V+                         EQ R D +V+   T
Sbjct: 197 PVPLWQHML-VGNSMFDLFVEGTSEPDADGASARVSPDLIQAIRGAEQQRADGWVR-GST 254

Query: 287 FLKQKIGGR-----------------RENGKASGR-----------------MAKGGSGS 312
             K +   R                 R++G+  GR                   +G    
Sbjct: 255 RDKGRGPERPRDQGRDGGRGGGRGVSRDHGRGPGRGGSVAVSGASAGRADRGFTRGARPG 314

Query: 313 GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFN--TQEEKDTVEQVFQNA 370
           GG+   +++  +      P I F FSR  CE     +   D     Q E + + +  +  
Sbjct: 315 GGATRAEVIAQLDRDGLLPAITFIFSRMGCEGAVGQLLSSDTRLIPQREGEQIRRHVEER 374

Query: 371 VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
           +  L EED  +      +  L RG A HH+G+LP+ +E+VE LF  G ++A+FATET A+
Sbjct: 375 MGSLAEEDLGILGYYDFVEGLSRGFACHHAGMLPLFREIVEELFTGGRIRAVFATETLAL 434

Query: 431 GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT 490
           G+NMPA+TVV   + K++G++H  I   EY Q++GRAGRRG D  G  ++     ++   
Sbjct: 435 GINMPARTVVLEKLVKFNGETHADITPAEYTQLTGRAGRRGIDIEGHAVVQWSRGLDPLA 494

Query: 491 LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
           +  +   +  PL S+F+ +Y   +NL+++  G+  A  +++ SF QFQ ++A+  +  KV
Sbjct: 495 VGGLASTRTYPLRSSFKPTYNMAVNLVAQV-GRQVARDILETSFAQFQADRAVVGLATKV 553

Query: 551 SKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRPERV-----LYYL 599
            + +E   +L+   E+      +  EY +L+  IA  EK  + + +   +      L  L
Sbjct: 554 RRNDE---ALEGYAESMHCHLGDFREYAELRRAIADAEKDGVRKRSAGRKAEAAVSLENL 610

Query: 600 GSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYI-----------VPVQLPL 648
             G +IKV   G   GW VVV   +   +G G  PS G G +           V V +P+
Sbjct: 611 RMGDIIKV-PAGRRSGWAVVVQTAR---SGKGA-PS-GPGVVTEDRQFRRLTLVDVPVPV 664

Query: 649 ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            +  S +   VP    P   +     A ++L +     +P   P    K    E     +
Sbjct: 665 SAAASIV---VPKHFNPKSPK-----ARRDLATSMRIAVPHDPPPMRAKEVAQEAAQEND 716

Query: 709 QIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKN 765
           +I  L  +L AHP ++  + E+  R  +R   +  E   LK K+  R + + +  D +  
Sbjct: 717 RIAYLRAELKAHPCHQCPEREDHARWAERWHRLKRETSGLKRKVEGRTNSVARTFDRI-- 774

Query: 766 RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
              VL +LG+++ D VV  +G     + T  +LL  E + +  +  LD   +AA  S  +
Sbjct: 775 -CVVLTQLGYLE-DDVVTERGERLRRLYTERDLLAAECLRHDVWMRLDAPGLAACVSTLV 832

Query: 826 PVDKSSEQINLRMELAKPLQQL--QESARKIAEIQNECKL--EVNVDEYVESTVRP--FL 879
                      R E A P  ++  ++ A  I E+Q       ++  D  +E T  P   +
Sbjct: 833 H--------EPRHEQADPSPRMPNEDVAAAITEMQRRWSELDDLEGDHGLEVTAVPDGGM 884

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
             +++ W+ G     V++  ++  G  +R  +++ + L Q+   A A  +  L +    A
Sbjct: 885 AWMVHRWASGERLDAVLRGQEMAAGDFVRRCKQIVDLLGQI---ADAAPDTELRRTARKA 941

Query: 940 SESLRRGIMFSNSL 953
            + +RRG++ ++ L
Sbjct: 942 IDGVRRGVVSADRL 955


>gi|329939077|ref|ZP_08288451.1| helicase [Streptomyces griseoaurantiacus M045]
 gi|329301962|gb|EGG45855.1| helicase [Streptomyces griseoaurantiacus M045]
          Length = 953

 Score =  346 bits (888), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 273/930 (29%), Positives = 454/930 (48%), Gaps = 76/930 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A  +A    ++  YT+P+KALS
Sbjct: 50  YDFGLDPFQIEACRALESGKGVLVAAPTGSGKTIVGEFAFHLALEQGRKCFYTTPIKALS 109

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 110 NQKYADLCRRYGSGKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLTGLGYVVMDE 169

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 170 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 228

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  +L  T   + +   R+ G+A     +
Sbjct: 229 VPLFQHVL--AGRRMYDLFEEGEGQKKAVNPDLTRLARTEAARPLYRDRKRGRAMREADR 286

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N ++ +
Sbjct: 287 ERDRRSRSRVWTPGRPEVIERLDAAGLLPAITFIFSRAGCESAVQQCLYAGLRLNDEDAR 346

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           + V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 347 EEVRALVEERTASIPREDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 406

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 407 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 466

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M    L  +   +  PL S+FR SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 467 LWQRGMSPEHLAGLAGTRTYPLRSSFRPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 525

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R   
Sbjct: 526 KSVVGISRQVQRNEEGLDGYKASMTCHLGDFEEYARLRRELKDRETELARQGAAQRRAEA 585

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG-TLPSRGGGY-IVPVQLPLIS 650
              L  L  G +I V  G         + +V  P    G T   RG  Y   P  L L +
Sbjct: 586 AVALEKLRPGDVIHVPTGKY-----AGLALVLDPGLPAGRTNGHRGTEYHDGPRPLVLTA 640

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN----------PVKDMKIED 700
                RL+      P++A + + +  +   +R PQ    L            V+  + + 
Sbjct: 641 ERQVKRLASVDFPVPVEALERMRIP-KSFNARSPQSRRDLASALRTKAGHISVERHRKQR 699

Query: 701 PEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQ 757
            +  D   +I  L   L AHP +   D E+  R  +R   +  +  QL+ ++  R + I 
Sbjct: 700 SQAAD-DREIARLRTALRAHPCHGCNDREDHARWAERYYRLLRDTSQLERRIEGRTNTIA 758

Query: 758 KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           +  D +     +L +L ++  + V +   R A L    D LL +E + +G +  L   ++
Sbjct: 759 RTFDRIVA---LLTELDYLRGNEVTEHGRRLARLYGELD-LLASECLRDGVWEGLGPAEL 814

Query: 818 AALASCF--------------IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKL 863
           AA  S                +P  ++   +   + +   L  L+E  R I++ +   + 
Sbjct: 815 AACVSALVYESRSGDDAMAPKVPSGRAKAALGEMVRIWGRLDALEEEFR-ISQTEGVGQR 873

Query: 864 EVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA 923
           E ++                + W+ G    EV++  ++  G  +R  +++ + L Q++AA
Sbjct: 874 EPDLG----------FAWAAHMWASGKGLDEVLREVEMPAGDFVRWCKQVIDVLGQIQAA 923

Query: 924 AQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           A   G   + +    A E L RG++  +S+
Sbjct: 924 AVPEGS-TVPRNARKAVEGLLRGVVAYSSV 952


>gi|331697089|ref|YP_004333328.1| DEAD/DEAH box helicase domain-containing protein [Pseudonocardia
           dioxanivorans CB1190]
 gi|326951778|gb|AEA25475.1| DEAD/DEAH box helicase domain protein [Pseudonocardia dioxanivorans
           CB1190]
          Length = 924

 Score =  346 bits (888), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 270/901 (29%), Positives = 431/901 (47%), Gaps = 78/901 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E     SFELD FQR +   LE    VLV A T AGKT V E+A+ +A     +  YT+P
Sbjct: 23  EFVAGLSFELDGFQRAACDALEDGHGVLVCAPTGAGKTVVGEFAVHLALAQGLKCFYTTP 82

Query: 128 LKALSNQKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           +KALSNQKY +L   H E   VGL+TGD +++ +A  +VMTTE+LR M+Y GS  L ++ 
Sbjct: 83  IKALSNQKYADLVARHGE-SAVGLLTGDTSVNGDAQVVVMTTEVLRNMIYAGSRHLDQLG 141

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE I+ LP  + +V LSAT+SNA +F +W+  + +    VV
Sbjct: 142 YVVMDEVHYLADRFRGAVWEEVILQLPEHVALVSLSATVSNAEEFGDWLVTV-RGDTTVV 200

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVD--------------EKEQFREDNFVKLQDTFLKQ 290
             + RP PL  ++  VG   L L V               + +  R+   +  Q +    
Sbjct: 201 VDEHRPVPLWQHMM-VGNRLLDLFVQSGAADDPTAAELRVDPDLVRQTRELDRQSSTAVW 259

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM- 349
             G R   G A  R+     G        ++  +      P I F FSR  C+       
Sbjct: 260 DRGRRGRQGSAPRRV-----GFRPPSRVTVIDRLDRDGLLPAITFVFSRNGCDAAVGQCV 314

Query: 350 -SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
            S L   T +E   + ++ +     L + D  +         L+RGIA HH+GLLP  KE
Sbjct: 315 RSGLRLTTDDEVAEIRRIVEKHTGDLPQGDLGVLGYWEWREGLERGIAAHHAGLLPAFKE 374

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
            VE LF  GLV+ +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAG
Sbjct: 375 TVEELFVRGLVRCVFATETLALGINMPARTVVLERLVKYNGEAHVELTPGEYTQLTGRAG 434

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
           RRG D  G  +++    ++   +  +   +  PL S+FR  Y   +NL++R   Q + E 
Sbjct: 435 RRGIDVEGHAVVVWQPGVDPERVGGLASTRTYPLRSSFRPGYNMAVNLLARLGAQRSRE- 493

Query: 529 VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKL 585
           +++ SF QFQ ++++  + +++ + EE  A   +S E    + AEY  L+  ++  EK L
Sbjct: 494 LLEMSFGQFQADRSVVGMARRIERNEETLAGYASSMECHLGDFAEYAALRRKVSDREKAL 553

Query: 586 MSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL---PSRG 637
             +     R      L  L  G +I V  GG   G  VV++        V  L     R 
Sbjct: 554 SRQGVADRRTAAAESLRALRPGDVIAV-PGGKRSGLAVVIDPGVDDDGDVRPLVVSEDRW 612

Query: 638 GGYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
            G +     P  +  L +++L    D R    R+ +  +++    + P   P+    +  
Sbjct: 613 SGRLSAADFPTPVEALGRVKLPRHVDHRSPRGRRDLASSLRNTGIQAPP--PQRRRGRGN 670

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS- 754
             +DPE       +  L   L AHP +   D E   R  +R   ++ + +QL+ K+R + 
Sbjct: 671 AHDDPE-------LATLRRALRAHPCHGCADREAHARWGERYHRLDRDTEQLRQKVRATT 723

Query: 755 -----QIQKFRDELKNRSRVLKKLGHIDADG---VVQLKGRAACLIDTGDELLVTELMFN 806
                Q  + R  L  R  V       DADG   V +   R A L    D LL  E + +
Sbjct: 724 HSLARQFDRIRALLDERGYV-----RADADGENAVTEHGERLARLWGESD-LLAAECLRH 777

Query: 807 GTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
           G +  L   ++AA+ S  +   +       R+      + L ++ R  A+++++ +    
Sbjct: 778 GVWERLTAPELAAVVSALVYESRRDNGPVPRVPAGAVSEALADTVRLWADLESDER---- 833

Query: 867 VDEYVESTVRPFLMDV--IYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQ 919
               ++ T  P L     ++ W++G + A+V+        ++  G  +R  R++ + L+Q
Sbjct: 834 -RHRIDRTREPDLGFAWPVHRWARGESLAQVLAAAEQNGHELSAGDFVRWCRQVLDLLDQ 892

Query: 920 L 920
           +
Sbjct: 893 I 893


>gi|422450854|ref|ZP_16527567.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA2]
 gi|315109469|gb|EFT81445.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA2]
          Length = 917

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 452/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + ++  P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKVELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVADVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|289425376|ref|ZP_06427153.1| DEAD/DEAH box helicase [Propionibacterium acnes SK187]
 gi|365963071|ref|YP_004944637.1| superfamily II RNA helicase [Propionibacterium acnes TypeIA2
           P.acn31]
 gi|365965312|ref|YP_004946877.1| superfamily II RNA helicase [Propionibacterium acnes TypeIA2
           P.acn17]
 gi|365974245|ref|YP_004955804.1| superfamily II RNA helicase [Propionibacterium acnes TypeIA2
           P.acn33]
 gi|422427690|ref|ZP_16504601.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA1]
 gi|422433569|ref|ZP_16510437.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA2]
 gi|422436141|ref|ZP_16512998.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA2]
 gi|422438458|ref|ZP_16515302.1| DEAD/DEAH box helicase [Propionibacterium acnes HL092PA1]
 gi|422444448|ref|ZP_16521242.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA1]
 gi|422445150|ref|ZP_16521904.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA1]
 gi|422453729|ref|ZP_16530416.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA3]
 gi|422501714|ref|ZP_16577968.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA2]
 gi|422510256|ref|ZP_16586402.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA1]
 gi|422516643|ref|ZP_16592752.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA2]
 gi|422524000|ref|ZP_16600009.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA2]
 gi|422531964|ref|ZP_16607910.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA1]
 gi|422543279|ref|ZP_16619129.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA1]
 gi|422548203|ref|ZP_16624019.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA3]
 gi|422550092|ref|ZP_16625892.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA1]
 gi|422558612|ref|ZP_16634352.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA2]
 gi|422562665|ref|ZP_16638342.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA1]
 gi|422571695|ref|ZP_16647276.1| DEAD/DEAH box helicase [Propionibacterium acnes HL067PA1]
 gi|289154354|gb|EFD03042.1| DEAD/DEAH box helicase [Propionibacterium acnes SK187]
 gi|313792458|gb|EFS40551.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA1]
 gi|313801496|gb|EFS42745.1| DEAD/DEAH box helicase [Propionibacterium acnes HL110PA2]
 gi|313816413|gb|EFS54127.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA1]
 gi|313827289|gb|EFS65003.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA2]
 gi|314917850|gb|EFS81681.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA1]
 gi|314919739|gb|EFS83570.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA3]
 gi|314930018|gb|EFS93849.1| DEAD/DEAH box helicase [Propionibacterium acnes HL067PA1]
 gi|314956405|gb|EFT00717.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA1]
 gi|314957274|gb|EFT01377.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA1]
 gi|314967723|gb|EFT11822.1| DEAD/DEAH box helicase [Propionibacterium acnes HL037PA1]
 gi|315078215|gb|EFT50258.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA2]
 gi|315098195|gb|EFT70171.1| DEAD/DEAH box helicase [Propionibacterium acnes HL059PA2]
 gi|315101650|gb|EFT73626.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA1]
 gi|327452354|gb|EGE99008.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA3]
 gi|327452770|gb|EGE99424.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA2]
 gi|327453522|gb|EGF00177.1| DEAD/DEAH box helicase [Propionibacterium acnes HL092PA1]
 gi|328752637|gb|EGF66253.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA2]
 gi|328753810|gb|EGF67426.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA1]
 gi|365739752|gb|AEW83954.1| superfamily II RNA helicase [Propionibacterium acnes TypeIA2
           P.acn31]
 gi|365741993|gb|AEW81687.1| superfamily II RNA helicase [Propionibacterium acnes TypeIA2
           P.acn17]
 gi|365744244|gb|AEW79441.1| superfamily II RNA helicase [Propionibacterium acnes TypeIA2
           P.acn33]
          Length = 917

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 452/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + ++  P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKVELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|116670732|ref|YP_831665.1| DEAD/DEAH box helicase [Arthrobacter sp. FB24]
 gi|116610841|gb|ABK03565.1| DEAD/DEAH box helicase domain protein [Arthrobacter sp. FB24]
          Length = 964

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 280/935 (29%), Positives = 449/935 (48%), Gaps = 106/935 (11%)

Query: 64  VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVI 123
            Y G   +T  FELD FQR +   L++   VLV+A T AGKT V E+AI +A +   +  
Sbjct: 26  TYLGAFVRTLDFELDDFQRQACLSLQQGRGVLVAAPTGAGKTIVGEFAIYLALQRALKAF 85

Query: 124 YTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           YT+P+KALSNQKY EL  ++  ++VGL+TGD +++ +A  +VMTTE+LR MLY  S+ L 
Sbjct: 86  YTTPIKALSNQKYSELADKYGPENVGLLTGDTSINGDAPVVVMTTEVLRNMLYADSDTLD 145

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           ++ +V+ DE+HY+ DR RG VWEE II LP  +++  LSAT+SNA +F  W+  +     
Sbjct: 146 DLGFVVMDEVHYLADRFRGAVWEEVIIHLPSEVQVASLSATVSNAEEFGAWLDTVRGH-T 204

Query: 242 HVVYTDFRPTPLQHYVF-------------------PVGGSGLYLVVDEKEQFREDNFVK 282
            V+ ++ RP PL  +V                    P G S             E  F +
Sbjct: 205 DVIVSEHRPVPLWQHVMVGREIVDLFAGETTFDEIAPEGESDPAATAMTANAALERGF-E 263

Query: 283 LQDTFLKQKIGGRRENGKASGRMAKGGS--------------GSGG--SDIFK-----IV 321
           +    L       + N +A  R   GG               G GG  S + K     ++
Sbjct: 264 VNPDLLAMARTESQMNSRA--RFGHGGRSQRRQQHQRGDNRHGQGGQQSPVRKASRPQVI 321

Query: 322 KMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDR 379
             +  +   P I F FSR  C+        + L   T+ E+  + +    A   +  +D 
Sbjct: 322 ASLDRQDLLPSITFIFSRAGCDAAVAQCVSAGLWLTTEREQQVIARRVDEAAQDIPSDDL 381

Query: 380 NLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
           ++         L RG+A HH+G+LP  KE+VE LF EGLVKA+FATET A+G+NMPA++V
Sbjct: 382 DVLGFWSWRDGLLRGLAAHHAGMLPTFKEVVEKLFVEGLVKAVFATETLALGVNMPARSV 441

Query: 440 VFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKP 499
           V   + K++G++H  I +GEY Q++GRAGRRG D  G  +++     +   +  +   + 
Sbjct: 442 VLEKLDKFNGEAHVGITAGEYTQLTGRAGRRGIDVEGHAVVLWQPGTDPTAVAGLASRRT 501

Query: 500 APLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAAS 559
            PL S+FR +Y   +NL+++  G+  A  ++++SF QFQ ++++  + ++V   EE  A 
Sbjct: 502 YPLNSSFRPTYNMSINLLAQF-GRPRAREILESSFAQFQADRSVVGLARQVRSREESLAG 560

Query: 560 LDASGE---AEVAEYHKLKLDIAQLEKKLMSEITR-----PERVLYYLGSGRLIKVREGG 611
              S      +  EY +L+ +++  E       +R      E  L  L  G ++ V  G 
Sbjct: 561 FQKSMTCHLGDFTEYSRLRRELSDAENIASRSTSRARKSIAEDSLSRLLPGDVVDVPTGR 620

Query: 612 TDWGWGVVVNV---VKKPSAGVGTLPS---RGG-----GYIVPVQLPLISTLSKIRLSVP 660
              G+ VV+      ++P   V TL +   R G     G I PV    I         VP
Sbjct: 621 AP-GFAVVLGSDHNSREPRPAVLTLDNQLRRIGLQDLEGPITPVTRVRIP--KSFNAKVP 677

Query: 661 PDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAH 720
              +  D   S+  A++E     P      +  +   + D E      +I +L   L +H
Sbjct: 678 KSRK--DLASSVRNAIRENRPPAPGNARNTDFGRAAALPDVE-----KRISDLRLALRSH 730

Query: 721 PLNK-SQDENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHID 777
           P +  S+ E+  R  +R  ++  E   L  ++  R + I K  D + +   +L   G+++
Sbjct: 731 PCHGCSEREDHARWSERWWKLRRETDGLVREIQGRTNTIAKTFDRVCD---LLSSYGYLE 787

Query: 778 ADG----VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ 833
                   +   G+    I    +LL+++ +  G F+DLD  +VAALAS  +   K  E+
Sbjct: 788 TSESGKVTINADGQKLRRIYGEKDLLISQSLRQGAFSDLDATEVAALASVLVYQAKREER 847

Query: 834 ------INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDV--IYC 885
                  ++ +E A  +   + S  + AE +N+  L          T  P L  V  I+ 
Sbjct: 848 GLRPRMPSVSLETAVDIVVREWSVLEDAEEENKLPL----------TGEPELGLVWPIFK 897

Query: 886 WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           W+KG    EV+  TD+  G  +R  +++ + L+QL
Sbjct: 898 WAKGKHLQEVLNGTDLAAGDFVRWVKQVIDLLDQL 932


>gi|422431407|ref|ZP_16508285.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA2]
 gi|422534720|ref|ZP_16610644.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA1]
 gi|314978079|gb|EFT22173.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA2]
 gi|315088266|gb|EFT60242.1| DEAD/DEAH box helicase [Propionibacterium acnes HL072PA1]
          Length = 917

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 287/943 (30%), Positives = 455/943 (48%), Gaps = 113/943 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVF-------------PVG-GSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
            PL  +V              P G    L  +  E+ +F+ D+  + +    K    G+R
Sbjct: 191 VPLVQHVAVARRLYELFDSRRPTGVNPELTSIAKEEARFQRDDSRRPRGRSGK----GKR 246

Query: 297 ENGKASGRMAKGGSGS-------------GGSDIFKIVKMIMERKFQPVIVFSFSRRECE 343
                +GR   GG+ +               +   ++V+ + +    P I+F FSR  C+
Sbjct: 247 SVSYGTGRF--GGTSAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCD 304

Query: 344 QHAMSMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
                +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+G
Sbjct: 305 AAVSQLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAG 364

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           LLPVIK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY 
Sbjct: 365 LLPVIKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYT 424

Query: 462 QMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
           Q++GRAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + 
Sbjct: 425 QLTGRAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SM 483

Query: 522 GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLK 575
           G+  A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+
Sbjct: 484 GREKARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLR 540

Query: 576 LDIAQL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV 630
            +I +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         
Sbjct: 541 ENIRELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------P 591

Query: 631 GTLPSRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLA 675
           GT  +RG     P  L +    + IRL                VP    P +  Q+    
Sbjct: 592 GTHGTRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRC 646

Query: 676 VQELESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIR 732
           + +   R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R
Sbjct: 647 LGKAFDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHAR 701

Query: 733 CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACL 791
             +R   +    ++  +K R ++      + +    VL+ LG++   G  V   GR    
Sbjct: 702 FAERAMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSG 760

Query: 792 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
           I +  +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +  
Sbjct: 761 IYSELDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGK 812

Query: 852 RKIAEIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGS 905
            + AE Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G 
Sbjct: 813 SEAAESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGD 870

Query: 906 IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            +R  R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 871 FVRRVRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|289428231|ref|ZP_06429927.1| DEAD/DEAH box helicase [Propionibacterium acnes J165]
 gi|289158612|gb|EFD06819.1| DEAD/DEAH box helicase [Propionibacterium acnes J165]
          Length = 917

 Score =  346 bits (887), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 287/943 (30%), Positives = 455/943 (48%), Gaps = 113/943 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVF-------------PVG-GSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
            PL  +V              P G    L  +  E+ +F+ D+  + +    K    G+R
Sbjct: 191 VPLVQHVAVARRLYELFDSRRPTGVNPELTSIAKEEARFQRDDSRRPRGRSGK----GKR 246

Query: 297 ENGKASGRMAKGGSGS-------------GGSDIFKIVKMIMERKFQPVIVFSFSRRECE 343
                +GR   GG+ +               +   ++V+ + +    P I+F FSR  C+
Sbjct: 247 SVSYGTGRF--GGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCD 304

Query: 344 QHAMSMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
                +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+G
Sbjct: 305 AAVSQLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAG 364

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           LLPVIK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY 
Sbjct: 365 LLPVIKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYT 424

Query: 462 QMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
           Q++GRAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + 
Sbjct: 425 QLTGRAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SM 483

Query: 522 GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLK 575
           G+  A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+
Sbjct: 484 GREKARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLR 540

Query: 576 LDIAQL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV 630
            +I +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         
Sbjct: 541 ENIRELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------P 591

Query: 631 GTLPSRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLA 675
           GT  +RG     P  L +    + IRL                VP    P +  Q+    
Sbjct: 592 GTHGTRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRC 646

Query: 676 VQELESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIR 732
           + +   R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R
Sbjct: 647 LGKAFDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHAR 701

Query: 733 CFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACL 791
             +R   +    ++  +K R ++      + +    VL+ LG++   G  V   GR    
Sbjct: 702 FAERAMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSG 760

Query: 792 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESA 851
           I +  +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +  
Sbjct: 761 IYSELDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGK 812

Query: 852 RKIAEIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGS 905
            + AE Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G 
Sbjct: 813 SEAAESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGD 870

Query: 906 IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            +R  R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 871 FVRRVRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|54025131|ref|YP_119373.1| ATP-dependent RNA helicase [Nocardia farcinica IFM 10152]
 gi|54016639|dbj|BAD58009.1| putative ATP-dependent RNA helicase [Nocardia farcinica IFM 10152]
          Length = 899

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 273/921 (29%), Positives = 452/921 (49%), Gaps = 64/921 (6%)

Query: 62  NPVYNGEMAK---TYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD 118
           N    GE+A+     SF+LDPFQR +   LE    VLV A T AGKT V E+A+ +A   
Sbjct: 4   NRSRTGELARFSQELSFDLDPFQREACQALEAGHGVLVCAPTGAGKTVVGEFAVHLALVS 63

Query: 119 KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRG 176
             +  YT+P+KALSNQK+ +L + +    VGL+TGD +++P+A  +VMTTE+LR MLY  
Sbjct: 64  GGKCFYTTPIKALSNQKFADLTRRYGRASVGLLTGDQSINPDAPVVVMTTEVLRNMLYAS 123

Query: 177 SEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHL 236
           S+ L+ +++V+ DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F  W+  +
Sbjct: 124 SDALRGLSYVVMDEVHYLADRFRGAVWEEVILHLPADVRLVSLSATVSNAEEFGAWMETV 183

Query: 237 HKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR 296
                 VV  + RP PL  +V    G  ++ + D K     D  V + D  L + I  R 
Sbjct: 184 RGDTA-VVVDETRPVPLWQHVMV--GRRMFDLFDTKSS---DQKV-IVDEDLVRYIRHRE 236

Query: 297 ENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMSM-- 349
           +  + +G     G G    D       +++  + E    P I F FSR  C+        
Sbjct: 237 QADRINGWGGPRGRGGPRRDFRPLPRPEVLARLDEEGLLPAITFIFSRAGCDGALAQCLR 296

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
           S+LD +  E+ D ++ + +     L + D  +         L RG+A HH+G+LP  +  
Sbjct: 297 SRLDLSRPEDADEIDAIIEKHTGELPKSDLEVLGYWEWREALHRGLAAHHAGMLPAFRHT 356

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
           VE LF  GLV+A+FATET A+G+NMPA+TVV   + K++G+SH  +  GEY Q++GRAGR
Sbjct: 357 VEELFVRGLVRAVFATETLALGINMPARTVVLERLVKFNGESHAELTPGEYTQLTGRAGR 416

Query: 470 RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
           RG D  G  +++   +++ + +  +   +  PL S+FR  Y   +NL+ R  G   A  +
Sbjct: 417 RGIDVEGHAVVLWQPEVDTSAVAGLASTRTYPLRSSFRPGYNMSINLIDRM-GAAEARAL 475

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASL-DASGEAEVA--EYHKLKLDIAQLEKKLM 586
           ++ SF QFQ ++++  + + + + E + A L D  G AE    +Y  L+  I Q E++L 
Sbjct: 476 LERSFAQFQADRSVVGLVRGIERNEAQLARLRDQLGGAEGGFLDYIALRERIKQRERQLA 535

Query: 587 SEITRPE------RVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKP--SAGVGTLPSRGG 638
            + +R +      R L  L  G ++ +   G   G  V++     P     +     +  
Sbjct: 536 QQ-SRADRRGAAVRALTTLRRGDVVAI-PSGRRAGLAVILEPDATPHDPRPLVLTEDKWA 593

Query: 639 GYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
           G +     P+ +  L  +RL    D R   AR+ +  A++      P G  +     D  
Sbjct: 594 GRVSVADFPVPAEALGHMRLPRRVDHRTARARRDLASALRSTGITAP-GRQRRGRHSDAA 652

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKM--RDS 754
            ED E       +  L   L AHP +   D  Q+ R  +R   +  E + ++ K+    +
Sbjct: 653 -EDRE-------LATLRRTLRAHPAHSRPDREQLSRIGERYNRMLRETETMRQKVAATTN 704

Query: 755 QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDH 814
            + +  D +     +L++ G +  +G V   GR    I    +L+V E +  G +  L  
Sbjct: 705 SLARTFDRILG---LLEERGFVH-EGEVTADGRRLARIYAESDLVVAECLRRGVWRGLGP 760

Query: 815 HQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
            ++A + S  +     S Q    +  A P   ++ +     ++ +E + +      +  T
Sbjct: 761 AELAGVVSVLV---YESRQEGGYLGPAGPTPPVRRAVGATVDVWSELRTD-EARHKLPPT 816

Query: 875 VRPFLMDV--IYCWSKGATFAEVI-----QMTDIFEGSIIRSARRLDEFLNQLRAAAQAV 927
             P L  V  +Y W++G   AE +     Q   +  G  +R  R++ + L+Q++  A   
Sbjct: 817 REPDLGFVTGVYKWARGDGLAEALLAGGDQGVPLSAGDFVRWCRQVIDLLDQIQGTAD-- 874

Query: 928 GEVNLEKKFAAASESLRRGIM 948
            +  +    A A  ++RRG++
Sbjct: 875 -DTEVASTAAKAVRAIRRGVV 894


>gi|116071149|ref|ZP_01468418.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107]
 gi|116066554|gb|EAU72311.1| DEAD/DEAH box helicase-like protein [Synechococcus sp. BL107]
          Length = 926

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 281/931 (30%), Positives = 448/931 (48%), Gaps = 109/931 (11%)

Query: 43  AVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSA 102
           A P       D A  G+  +P      ++ ++F LD FQ  +V  L +  SV+VSA T +
Sbjct: 4   AQPEPSTQASDAAASGSGLDP------SQCFAFPLDDFQLEAVDALNQGHSVVVSAPTGS 57

Query: 103 GKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNAS 160
           GKT V EYAI  A    Q+V YT+PLKALSNQK R+  ++F D  VGL+TGD++++  AS
Sbjct: 58  GKTLVGEYAIYRALAHGQKVFYTTPLKALSNQKLRDFREQFGDENVGLLTGDLSVNREAS 117

Query: 161 CLVMTTEILRGMLYRGSE----VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKM 216
            +VMTTEI R MLY  ++     L +V  V+ DE HYM D +RG VWEESII  PP +++
Sbjct: 118 IVVMTTEIFRNMLYAEADEHDDPLADVEAVVLDECHYMNDSQRGTVWEESIIHCPPPVQL 177

Query: 217 VFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFR 276
           V LSAT++NA Q  +WI  +H  P  ++ +D RP PLQ + F     GL+ +++E     
Sbjct: 178 VALSATVANAGQLTDWIEKVHG-PTTLIVSDHRPVPLQ-FSF-CSAKGLHPLLNEAGTGL 234

Query: 277 EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFS 336
             N           K+    +  K  GR  K          F + +M  +R   P I F 
Sbjct: 235 HPNC----------KVWRAPKGQKRKGRSNKPPQPEAPPISFVVAQM-AQRDMLPAIYFI 283

Query: 337 FSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           FSRR C++    +      TQ+E+  +            E  R+    + +L    RGIA
Sbjct: 284 FSRRNCDKSVRDLGAQCLVTQDEQARIHARLSAYSVANPEAVRDGIHADALL----RGIA 339

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            HH+G+LP  KEL+E LFQ+GLVK +FATET A G+NMPA++ V  ++ K     HR + 
Sbjct: 340 AHHAGVLPAWKELIEELFQQGLVKVVFATETLAAGINMPARSTVIASLSKRTERGHRPLM 399

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILN 515
             E++QM+GRAGRRG D +G  ++ V  + E       +   PA PLVS F  SY  +LN
Sbjct: 400 GSEFLQMAGRAGRRGLDSQGY-VVTVQSRFEGVREAGQLATSPADPLVSQFTPSYGMVLN 458

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA-SGEAEVAEYHKL 574
           L+ R   +  A  +++ SF ++     L D  + +S+L  + + LD  +G+    ++   
Sbjct: 459 LLQRHSLE-KARELVQRSFGRYLAGLDLVDDEEMLSQLRLQLSQLDGVAGDVPWEDFEDY 517

Query: 575 KLDIA--------------QLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVV 620
           + +                Q E+ L +E+T   + L +  +G L+ ++         V  
Sbjct: 518 EKERGRLREERRLLRILQQQAEETLANELT---QALQFASNGALVSLKS--PQLRGRVTP 572

Query: 621 NVVKKPSAGVGTLP------SRGGGYIVPVQ--LPLISTLSKIRLS--VPPDL-RPLDAR 669
            V+ +   G G  P            ++P Q  + L + LS +++   VPP L R  + R
Sbjct: 573 AVIVEKVNGPGQFPRLLCLTDDNVWILLPCQGVVSLHAELSCLQVDGVVPPVLQRSGEIR 632

Query: 670 QS------ILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLN 723
                   + LAV  +  R     P+ +          EV+     +++LE +L  HP +
Sbjct: 633 HGDQISGQLALAVAHMARRHDMTTPQYDLAG-------EVLTQARLVQQLESELEQHPAH 685

Query: 724 KSQDENQIRCFQRKA-EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVV 782
           +  D  Q++  +R+  E+ HEI + + ++   +  +  D       +L++ G +D     
Sbjct: 686 RWGDRKQLKKHRRRMEELEHEIAE-RQRLLHHRSNRHWDMFLALKDILQQFGCLDDLDPT 744

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA-------------LASCFIPVDK 829
           ++ GR    +   +EL +   + +G  ++LD   +AA             L S F P   
Sbjct: 745 EV-GRTVAALRGDNELWLGLALMSGHLDELDPPNLAAVFEAISTEVNRPDLWSGFPPSGP 803

Query: 830 SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKG 889
           + E +     L + L + QE A  +                V +   P LM ++  W+KG
Sbjct: 804 AEEALQDLSGLRRELLRAQERASVV----------------VPAWWEPELMGLVEAWAKG 847

Query: 890 ATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            +++++I  T + EG ++R  RR  + L Q+
Sbjct: 848 TSWSDLIANTSLDEGDVVRIMRRTVDLLAQV 878


>gi|29833237|ref|NP_827871.1| ATP-dependent RNA helicase [Streptomyces avermitilis MA-4680]
 gi|29610359|dbj|BAC74406.1| putative ATP-dependent RNA helicase [Streptomyces avermitilis
           MA-4680]
          Length = 937

 Score =  345 bits (886), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 273/930 (29%), Positives = 447/930 (48%), Gaps = 74/930 (7%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYADLARRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V  + G  +Y + +E E  ++    +  +L      +     R+ G+A     +
Sbjct: 211 VPLFQHV--LAGRRMYDLFEEGEGHKKAVNPDLTRLARMEASRPSYQDRKRGRAMREADR 268

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N +  +
Sbjct: 269 ERERRQRSRVWTPGRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEAAR 328

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           D V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 329 DKVRALVEERTASIPTEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 388

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 389 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 448

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +         L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 449 LWQRGFSPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVDQF-GRHRSRELLETSFAQFQAD 507

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE       S    +    EY +L+ ++   E +L  +     R   
Sbjct: 508 KSVVGISRQVQRNEEGLEGYKESMTCHLGDFEEYARLRRELKDRETELAKQGAAQRRAEA 567

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG--GYIVPVQLPLIS 650
              L  L  G +I V  G         + +V  P    G      G   +  P  L L +
Sbjct: 568 AVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFEQHDGPRPLVLTA 622

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL---------NPVKDMKIEDP 701
                RL+      P++A + + +  +    R PQ    L         + V D   +  
Sbjct: 623 ERQVKRLASMDFPVPVEALERMRIP-KSFNPRSPQSRRDLASALRTKAGHIVPDRHRKGR 681

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQK 758
                  +I  L  +L AHP +   D E+  R  +R   +  +  QL+ ++  R + I +
Sbjct: 682 SAAADDREIARLRAELRAHPCHGCNDREDHARWAERYYRLMRDTSQLERRIEGRTNTIAR 741

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
             D +     +L +L ++  D V     R A L    D LL +E +  G +  LD  ++A
Sbjct: 742 TFDRIVA---LLTELDYLRGDEVTAHGKRLARLYGELD-LLASECLRAGVWEGLDPAELA 797

Query: 819 ALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           A  S  +              P  K+   +   + +   L  L+E  R I + +   + E
Sbjct: 798 ACVSALVYESRVGDDAMAPKLPSGKAKAALGEMVRIWGRLDALEEDFR-ITQTEGVGQRE 856

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
            ++                Y W+ G    EV++  ++  G  +R  +++ + L Q+ AAA
Sbjct: 857 PDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQISAAA 906

Query: 925 QAVGEVNLEKKFA-AASESLRRGIMFSNSL 953
              GE +   K A  A + L RG++  +S+
Sbjct: 907 PVRGEGSTVAKNARKAVDELLRGVVAYSSV 936


>gi|422579216|ref|ZP_16654739.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA4]
 gi|314914924|gb|EFS78755.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA4]
          Length = 917

 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+    +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDE-GRGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + ++  P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKVELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|422539058|ref|ZP_16614931.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA1]
 gi|313764063|gb|EFS35427.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA1]
          Length = 917

 Score =  345 bits (884), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 283/938 (30%), Positives = 446/938 (47%), Gaps = 103/938 (10%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + ++  P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKVELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK 737
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D      F  +
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 738 AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGD 796
           A       + +     ++      + +    VL+ LG++   G  V   GR    I +  
Sbjct: 706 AMRLRRRSERELTNARAKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSEL 765

Query: 797 ELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAE 856
           +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + AE
Sbjct: 766 DLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAAE 817

Query: 857 IQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRSA 910
            Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R  
Sbjct: 818 SQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRRV 875

Query: 911 RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 876 RQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|357402751|ref|YP_004914676.1| helicase helY [Streptomyces cattleya NRRL 8057 = DSM 46488]
 gi|386358824|ref|YP_006057070.1| DSH domain-containing protein [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|337769160|emb|CCB77873.1| putative helicase helY [Streptomyces cattleya NRRL 8057 = DSM
           46488]
 gi|365809332|gb|AEW97548.1| DSH domain protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
          Length = 947

 Score =  345 bits (884), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 270/947 (28%), Positives = 454/947 (47%), Gaps = 87/947 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   +E  + VLV+A T +GKT V E+A+ +A R  ++  YT+
Sbjct: 27  GTFRELYDFALDPFQIEACQAMEAGKGVLVAAPTGSGKTIVGEFAVHLALRAGRKCFYTT 86

Query: 127 PLKALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 87  PIKALSNQKYADLVKRYGPGKVGLLTGDNSVNADAPVVVMTTEVLRNMLYAGSQALSGLG 146

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 147 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVI 205

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRED--------------NFVKLQDTFLKQ 290
            ++ RP PL  +V  + G  +Y + +EK    +                  + Q+T    
Sbjct: 206 VSEHRPVPLWQHV--LAGRRMYDLFEEKSAAPDAAVRPGKLDVNPDLLRLARTQNTLGYN 263

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQH 345
               RR   +A     +       + I+     ++++ +      P I F FSR  CE  
Sbjct: 264 PRDRRRRGYEADRERER----RQRNRIWTPGRPEVIERLDAEGLLPAITFIFSRAGCEAA 319

Query: 346 AMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLL 403
                 + L  N  E +  V  + +     + +ED ++      L  L+RGIA HH+G+L
Sbjct: 320 VQQCLHAGLRLNDDEARAKVRAIAEERTAAIADEDLHVLGYFEWLEGLERGIAAHHAGML 379

Query: 404 PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQM 463
           P  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G++H  I  GEY Q+
Sbjct: 380 PTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGETHADITPGEYTQL 439

Query: 464 SGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQ 523
           +GRAGRRG D  G  +++    ++   L  +   +  PL S+FR SY   +NL+ +  G+
Sbjct: 440 TGRAGRRGIDVEGHAVVLWQRGLDPVALAGLAGTRTYPLRSSFRPSYNMAVNLVGQF-GR 498

Query: 524 FTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQ 580
             +  +++ SF QFQ ++++  I ++V + EE  A         +    EY +L+ ++  
Sbjct: 499 HRSRELLETSFAQFQADRSVVGITRQVQRNEEGLAGYREGMTCHLGDFEEYGRLRRELKD 558

Query: 581 LEKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPS 635
            E  L  +            L  L  G +I V  G         + +V  P    G  P 
Sbjct: 559 RESALSRQGAAQHRAAAADALEKLKPGDIIHVPAGKF-----AGLALVLDPGIPAGRSPG 613

Query: 636 R---------GGGYIV-----------PVQLPL-ISTLSKIRLSVPPDLRPLDARQSILL 674
           R         G   +V           P+  P+ +  L ++R+    + R   +R+ +  
Sbjct: 614 RPHQRYLAEDGPRPLVLTAERQVKRLAPMDFPVPVEALERMRIPRGFNPRSPQSRRDLAS 673

Query: 675 AVQELESRFPQGLP-KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIR 732
           A++          P +    +    +D E+  L  +I        AHP +   + E+  R
Sbjct: 674 AMRSKAGTAGIHAPGRRRKQRSAAADDAELARLRTEIR-------AHPCHGCDEREDHAR 726

Query: 733 CFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
             +R   +  + Q L+ ++  R + I +  D +     +L +LG++D D V +   R A 
Sbjct: 727 WAERYWRLQRDTQALQRRIEGRTNTIARTFDRICG---LLTELGYLDGDTVTEHGRRLAR 783

Query: 791 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQE 849
           L    D LL +E +  G +N L   ++AA AS  +   +S++  +  ++        L E
Sbjct: 784 LYGELD-LLASECLREGVWNGLGPAELAACASALVYESRSADDMLAPKLPGGNARHALGE 842

Query: 850 SAR---KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
             R   ++  +++E +++ +           F     + W+ G     V++  D+  G  
Sbjct: 843 MVRIWGRLDALEDEHRIKQSEGVGQREPDLGFAW-AAHRWASGHGLDAVLRDADMPAGDF 901

Query: 907 IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           +R  ++L + L Q+  AA     V    +   A + L RG++  +SL
Sbjct: 902 VRWTKQLIDVLGQIAEAAPQDSPVRANAR--KAVDKLLRGVVAYSSL 946


>gi|422545031|ref|ZP_16620861.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA1]
 gi|314963152|gb|EFT07252.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA1]
          Length = 917

 Score =  345 bits (884), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 285/939 (30%), Positives = 452/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + ++  P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKVELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI +L  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITKLRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|326329698|ref|ZP_08196019.1| putative ATP-dependent RNA helicase [Nocardioidaceae bacterium
           Broad-1]
 gi|325952463|gb|EGD44482.1| putative ATP-dependent RNA helicase [Nocardioidaceae bacterium
           Broad-1]
          Length = 926

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 275/943 (29%), Positives = 462/943 (48%), Gaps = 89/943 (9%)

Query: 63  PVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRV 122
           PV+  + A  Y F LD FQ  +   +E  + VLV+A T +GKT V E+AI +A    ++ 
Sbjct: 19  PVFR-DFAALYDFGLDEFQIQACKEIEDGKGVLVAAPTGSGKTIVGEFAIHLALATGRKA 77

Query: 123 IYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVL 180
            YT+P+KALSNQKY +L + +    VGL+TGD  ++  A  +VMTTE+LR MLY GS  L
Sbjct: 78  FYTTPIKALSNQKYNDLVKRYGPDQVGLLTGDNVVNGEAPVVVMTTEVLRNMLYAGSHTL 137

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
             + +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F EW+  +  + 
Sbjct: 138 MGLGFVVMDEVHYLADRSRGAVWEEVIIHLPESVSVVSLSATVSNAEEFGEWLTTVRGET 197

Query: 241 CHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVK------------LQDTFL 288
             ++  + RP PL  +V  + G  +  +    +      FVK             +D + 
Sbjct: 198 TTII-EEKRPVPLYQHV--MAGRRIMDLFASSDVDAAAGFVKEGAPVNGELMKLARDDWA 254

Query: 289 KQKIGGRR-----ENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE 343
             ++  RR       G  + R+  G      S + +++  +      P I F FSR  C+
Sbjct: 255 AGRMTDRRTPKDRRKGNGNRRVGNGRRVWIPSRV-EVINALQRDNLLPAINFVFSRVGCD 313

Query: 344 QHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
                   + L   T +E+D +    + A   L +EDR++      +  L RG+A HH+G
Sbjct: 314 AAVQQCIQANLRLTTPDERDEIFAYVEEACADLPDEDRHVLGYHDWVDGLTRGVAAHHAG 373

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           LLP  K++VE LF  GLVKA+FATET A+G+NMPA+TVV   + KW+G++H  +  GEY 
Sbjct: 374 LLPAFKQVVEELFLRGLVKAVFATETLALGINMPARTVVIEKLSKWNGEAHVNLSPGEYT 433

Query: 462 QMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
           Q+ GRAGRRG D  G  +++  + +    L  +   +  PL S+FR SY   +NL+ +  
Sbjct: 434 QLVGRAGRRGLDVEGHGVVLWQQGLNPRELAGLASTRTYPLRSSFRPSYNMAVNLVHQF- 492

Query: 522 GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEE------EAASLDASGEAEVAEYHKLK 575
           G+  +  +++ SF QFQ +KA+  + ++V K E+      EAA+ D     +  EY  ++
Sbjct: 493 GRARSRELLEQSFAQFQADKAVVGLARQVRKAEDALEGYQEAATCD---RGDFMEYAAIR 549

Query: 576 LDIAQLEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV 630
             I+ +EK    E     R      L  L  G +I V  G    G+ V+V+    P    
Sbjct: 550 RKISDIEKSSSRERRADRREEIIESLSKLKIGDVIDVPTGKFA-GYAVIVDPGFDPD--- 605

Query: 631 GTLPSRGGGYIV-----PVQLPL----ISTLSKIRLSVPPDLRPLDARQSILLAVQELES 681
           G  P     Y+V       +L +    +   ++ RL VP   +  + R   +   +++ S
Sbjct: 606 GPRP-----YVVTQDRQARRLAMMDFNVPIAAQTRLRVP---KSFNGRNPQMR--RDMAS 655

Query: 682 RFPQGLPKLNPV-----KDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQ 735
           R  +    L PV        + E    V+   QI EL  +L  HP +   D E+  R  +
Sbjct: 656 RLREKTRDLRPVPYEASPTARKERKSSVE--TQISELRRELKMHPCHDCPDREDHARWAE 713

Query: 736 RKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLID 793
           R  +++ +   L+ ++  R + + +  D + +   VL  L +++ + V + +G     + 
Sbjct: 714 RWFKLSRDTDTLRRRVEARTNTVARTFDRVCD---VLVALDYLEGETVTE-RGTHLMRLY 769

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESAR 852
           +  +L+  E +  G ++DL   ++AA  S  +    ++ +    R+   +    + E+ R
Sbjct: 770 SEMDLVAAEALREGLWDDLTPSELAAALSVLVYEARRADDATPPRLPGGRVKDVIAETVR 829

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSA 910
               +       +  D  ++   +P L      Y W++G    +V+   ++  G  +R  
Sbjct: 830 LWGHLD-----ALERDHKLDFLRQPDLGFAWAAYRWAEGDELDDVLSEVELAAGDFVRWV 884

Query: 911 RRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           ++L +   Q+   A A G+V L +      + L+RG++  +S+
Sbjct: 885 KQLIDLCGQV---ADAAGDVPLRRTARQTMDLLKRGVVAYSSV 924


>gi|422501935|ref|ZP_16578180.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA2]
 gi|315084841|gb|EFT56817.1| DEAD/DEAH box helicase [Propionibacterium acnes HL027PA2]
          Length = 917

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSRIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|302527220|ref|ZP_07279562.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces sp.
           AA4]
 gi|302436115|gb|EFL07931.1| DEAD/DEAH box helicase domain-containing protein [Streptomyces sp.
           AA4]
          Length = 921

 Score =  344 bits (883), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 280/945 (29%), Positives = 449/945 (47%), Gaps = 77/945 (8%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YA ++  A H       ++ E A    FE D FQ      LE    VLV A T AGKT V
Sbjct: 13  YAASRRRAKHPQLTR--FSAESA----FEFDDFQIRGCEALEEGHGVLVCAPTGAGKTVV 66

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMT 165
            E+A+ +A  + ++  YT+P+KALSNQKY +L + + +  VGL+TGD +++ NA  +VMT
Sbjct: 67  GEFAVHLALAEGRKCFYTTPIKALSNQKYADLVERYGNDAVGLLTGDTSINGNAQVVVMT 126

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY GS  + E+ +V+ DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SN
Sbjct: 127 TEVLRNMLYAGSSAIPELGYVVMDEVHYLADRFRGAVWEEVILHLPEHVRVVGLSATVSN 186

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVV-----DEKEQFR---- 276
           A +F EW+  + +    VV  + RP PL  ++  VG   L L       D  EQ R    
Sbjct: 187 AEEFGEWLVEV-RGDTTVVVDEHRPVPLWQHML-VGNQLLDLFAGQNEADPGEQLRINPT 244

Query: 277 ----EDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
                D+  +   TF   +                 G          +V+ +      P 
Sbjct: 245 LLRKTDDLGRFAPTFRGPR--------GGRRGAPPRGPRFRPPSRVDVVERLDHAGLLPA 296

Query: 333 IVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           IVF FSR  C+        S L  N  ++ + + ++       L E D  +         
Sbjct: 297 IVFIFSRAGCDAAVAQCVRSGLRLNGPDQVEEIRRIVDERTADLPEGDLGVLGYWEWREA 356

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L+RG A HH+GLLP  KE VE LF  GLVK +FATET A+G+NMPA+TVV   + K++G+
Sbjct: 357 LERGFAGHHAGLLPAFKETVEELFVRGLVKVVFATETLALGINMPARTVVLERLVKYNGE 416

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
           +H  +  GEY Q++GRAGRRG D  G  ++     ++   +  +   +  PL S+FR  Y
Sbjct: 417 AHVDLTPGEYTQLTGRAGRRGIDIEGHAVVAWQPGVDPKAVAGLASTRTYPLRSSFRPGY 476

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA--SGE-AE 567
              +NL+++  G   A  +++ SF QFQ ++++    +++ + +E      A  SG+  +
Sbjct: 477 NMAVNLVAQV-GADAARDLLEQSFAQFQADRSVVGTARRIERNKEALKGYTAAISGDFDQ 535

Query: 568 VAEYHKLKLDIAQLEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVV-- 620
           + EY +L+  I+  EK L  + T   R      L  L  G +I V   G   G  VVV  
Sbjct: 536 MLEYVELRAKISAREKTLSRQNTSSRRAETAQSLEKLRKGDVIAV-PAGRRAGLAVVVDP 594

Query: 621 --NVVKKPSAGVGTLPSRGGGYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQ 677
             + +++P   V T   R  G +     P  +  L +IRL    +LR    R+ I  A++
Sbjct: 595 GLDPIREPRPVVVT-EDRWSGPLSSADFPSPVEALGRIRLPKHLELRSPKTRRDIASALR 653

Query: 678 ELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQR 736
           +        LP     +    +D E       +  L   L AHP +  ++ E  +R  +R
Sbjct: 654 DSGI----SLPGRQRRRTAAADDAE-------LASLRRALRAHPCHGLAEREANLRWVER 702

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI---DADGVVQLKGRAACLID 793
              ++ E +QL+ K+  +             R+L + G++   D +  V   GR    + 
Sbjct: 703 YQRLSAETEQLERKV-AATTHSLARAFDRILRLLGERGYVRPGDGEDRVTEHGRRLTRLY 761

Query: 794 TGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARK 853
           +  +LL  E + +G +N L   ++AA+ S  +   +       R+         QE++R 
Sbjct: 762 SESDLLAAECIRHGVWNGLGPAELAAVVSTLVFEARRDTAGEPRLPGGAVPGAWQETSRL 821

Query: 854 IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT-----DIFEGSIIR 908
             E+  E +    +D   E          +Y W++G +  +V+        ++  G  +R
Sbjct: 822 WVEL-TEDERRHRLDRTREPDA--GFAWPVYRWARGESLEKVLTAAETNGQELSAGDFVR 878

Query: 909 SARRLDEFLNQLRAAAQAVG-EVNLEKKFAAASESLRRGIMFSNS 952
             R++ + L+Q+R     +G E  +    A A  +LRRG++ + +
Sbjct: 879 WCRQVIDLLDQIR---DVLGKEDPVGSAAAQAVRALRRGVVAAGA 920


>gi|295130913|ref|YP_003581576.1| putative helicase [Propionibacterium acnes SK137]
 gi|417929614|ref|ZP_12572998.1| type III restriction enzyme, res subunit [Propionibacterium acnes
           SK182]
 gi|422387607|ref|ZP_16467719.1| putative ATP-dependent RNA helicase [Propionibacterium acnes
           HL096PA2]
 gi|422392386|ref|ZP_16472456.1| putative ATP-dependent RNA helicase [Propionibacterium acnes
           HL099PA1]
 gi|422426215|ref|ZP_16503139.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA1]
 gi|422475485|ref|ZP_16551932.1| DEAD/DEAH box helicase [Propionibacterium acnes HL056PA1]
 gi|422478627|ref|ZP_16555046.1| DEAD/DEAH box helicase [Propionibacterium acnes HL007PA1]
 gi|422518975|ref|ZP_16595043.1| DEAD/DEAH box helicase [Propionibacterium acnes HL074PA1]
 gi|422522233|ref|ZP_16598263.1| DEAD/DEAH box helicase [Propionibacterium acnes HL045PA1]
 gi|422527618|ref|ZP_16603608.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA1]
 gi|422530163|ref|ZP_16606127.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA1]
 gi|422560613|ref|ZP_16636300.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA1]
 gi|291375376|gb|ADD99230.1| putative helicase [Propionibacterium acnes SK137]
 gi|313771905|gb|EFS37871.1| DEAD/DEAH box helicase [Propionibacterium acnes HL074PA1]
 gi|313809630|gb|EFS47366.1| DEAD/DEAH box helicase [Propionibacterium acnes HL083PA1]
 gi|313829950|gb|EFS67664.1| DEAD/DEAH box helicase [Propionibacterium acnes HL007PA1]
 gi|313833045|gb|EFS70759.1| DEAD/DEAH box helicase [Propionibacterium acnes HL056PA1]
 gi|314972883|gb|EFT16980.1| DEAD/DEAH box helicase [Propionibacterium acnes HL053PA1]
 gi|314975694|gb|EFT19789.1| DEAD/DEAH box helicase [Propionibacterium acnes HL045PA1]
 gi|314984122|gb|EFT28214.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA1]
 gi|327330048|gb|EGE71801.1| putative ATP-dependent RNA helicase [Propionibacterium acnes
           HL096PA2]
 gi|327442720|gb|EGE89374.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA1]
 gi|328761431|gb|EGF74957.1| putative ATP-dependent RNA helicase [Propionibacterium acnes
           HL099PA1]
 gi|340773737|gb|EGR96229.1| type III restriction enzyme, res subunit [Propionibacterium acnes
           SK182]
          Length = 917

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTSGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|227495430|ref|ZP_03925746.1| ATP-dependent RNA helicase [Actinomyces coleocanis DSM 15436]
 gi|226830977|gb|EEH63360.1| ATP-dependent RNA helicase [Actinomyces coleocanis DSM 15436]
          Length = 934

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 282/951 (29%), Positives = 473/951 (49%), Gaps = 87/951 (9%)

Query: 41  EVAVPSGYALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHT 100
           E++    Y L K  A +       +  E+     F LD FQ   +  +E   +VLV+A T
Sbjct: 22  ELSAAQRYRLAKQRAKYDKTERATFAAEL----DFFLDDFQMQGMESVENGHNVLVAAPT 77

Query: 101 SAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKD--VGLMTGDVTLSPN 158
            AGKT V E+A+ MA    QR  YT+P+KALSNQKYREL +++ D  VGL+TGDV ++ +
Sbjct: 78  GAGKTMVGEFALHMALSCGQRAFYTTPIKALSNQKYRELCEKYGDEQVGLLTGDVAINGD 137

Query: 159 ASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVF 218
           A  +VMTTE+ R M+Y+G + L ++  ++ DE+HY+ DR RG VWEE II  P  +++V 
Sbjct: 138 APLIVMTTEVARNMIYQGRD-LTDLRAIVLDEVHYLADRFRGPVWEEVIIHAPQHVQIVA 196

Query: 219 LSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRED 278
           LSAT+SNA +F  WI  + +  C ++ ++ RP PL  ++  VG   + L  +++ +F   
Sbjct: 197 LSATVSNAEEFGNWIDSV-RSGCDIIVSEKRPVPLYQHMM-VGRDIIDLYAEDETKFINP 254

Query: 279 NFVKLQDTFLKQK-IGGR--RENGK--ASGRMAKGGSGSGGSDIFKIVKMIMER-KFQPV 332
              +L+    KQ+ I  R  R+N +  A GR  +             V + ++R +  P 
Sbjct: 255 ---QLRTAISKQRGITSRNFRQNERHLAGGRRMRDTQKRPRKTTRPEVVISLDRARLLPA 311

Query: 333 IVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           I F FSR  CE     +  + +   +++E+  + ++   A+  L  ED ++  I      
Sbjct: 312 IYFIFSRSACEDAVEQIIGAGITLTSEKERKQIRKIVDEALYALQGEDLSVLRINTWQMA 371

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L+ G+A HH+GLLP +KE+VE LF  GLVK +FATET A+G+NMPA+TVV  A++KW+G 
Sbjct: 372 LEAGVAAHHAGLLPFMKEVVEKLFTLGLVKVVFATETLALGINMPARTVVLEALRKWNGI 431

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
           +   + +GEY Q++GRAGRRG D  G  +++  +  E   +  +   +  PLVS FR +Y
Sbjct: 432 AKVPLSAGEYTQLTGRAGRRGIDVEGHALVVWQDDHEPELVASLASKRTYPLVSAFRPTY 491

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA- 569
             + NL S  +   +A  V+   F QFQ ++ +  +     + +++   L  S    +  
Sbjct: 492 NMVANLASTGD-LASAREVMDECFAQFQADRKVVGLAVDAKRAQQQMDKLAPSVSCHLGD 550

Query: 570 --EYHKLKLDIAQLEK--------KLMSEITRPERVLYYLGSGRLIKV---REGGTDWGW 616
             EY   + ++  L+K        +L  E+   E++L  L  G +I V   R GG     
Sbjct: 551 ALEYFAAREELTFLQKQSSKRKSLQLGHEV---EKLLRSLQPGDVISVAGRRRGGD---- 603

Query: 617 GVVVNVV----KKPSAGV----GTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDA 668
           GVV        K P   V    G +      +  P    ++ ++ ++R     ++R   A
Sbjct: 604 GVVTKPARPGEKNPQLQVVFADGRMQMVSSAHF-PHGFSIVGSM-RLRKEYLRNVRRFQA 661

Query: 669 RQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE 728
                + +Q  + R   G P+       +++     D + +I ELE  + +HP++   D 
Sbjct: 662 EIGTEVGIQRSKGRL--GKPR-------RLKSQARSDELLRITELEDLVRSHPVHGCVDR 712

Query: 729 NQ-IRCFQRKAEVNHEIQQLKSKMRD--SQIQKFRDELKNRSRVLKKLGHIDADGVVQLK 785
           +Q  R   +      E ++L S++ +  S + K  D++     VL++LG + A  +    
Sbjct: 713 DQHARNAVQWMRARREFEKLASQVEEQTSSVAKRFDKI---VLVLEQLGCLHASDLTD-A 768

Query: 786 GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASC--FIPVDKSSEQINLRMELAKP 843
           G     I    +L+V   +  G ++DLD  Q+A++ S   F P    +    +      P
Sbjct: 769 GHTLRAIYGERDLVVALSLEAGIWDDLDEAQLASVVSACVFEPRKDHAPDPEIPEGAHGP 828

Query: 844 L-QQLQESARKIAEIQNECKLEVNVDE--YVESTVRPF---LMDVIYCWSKGATFAEVIQ 897
           + Q L  +AR +        L++N  E  +  +T  P    L++ +Y W KG + A  + 
Sbjct: 829 VGQALNATARIM--------LDINRAESAHQATTSMPLETGLVNAMYWWVKGDSLASAVS 880

Query: 898 MTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
             D+  G  +R  ++  + L Q+  A +     NL      A++++RR ++
Sbjct: 881 SADLEAGDWVRWCKQTIDLLMQISVATR---NSNLAWTARDAADAIRRSVV 928


>gi|453074949|ref|ZP_21977739.1| helicase [Rhodococcus triatomae BKS 15-14]
 gi|452763898|gb|EME22173.1| helicase [Rhodococcus triatomae BKS 15-14]
          Length = 896

 Score =  344 bits (882), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 272/908 (29%), Positives = 447/908 (49%), Gaps = 60/908 (6%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SF LD FQ  +   LE    VLV A T AGKT + E+A+ +A +  ++  YT+P+KALSN
Sbjct: 11  SFPLDGFQAEACRALESGHGVLVCAPTGAGKTVIGEFAVHLALKSDRKCFYTTPIKALSN 70

Query: 134 QKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QKY +L + +   DVGL+TGDV+++ +A  +VMTTE+LR MLY  S  L+ ++ V+ DE+
Sbjct: 71  QKYADLVERYGKADVGLLTGDVSINSDAPVVVMTTEVLRNMLYANSPALRGLSHVVMDEV 130

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F  W+  + +    VV  + RP 
Sbjct: 131 HYLADRFRGAVWEEVILHLPDDVRLVSLSATVSNAEEFGAWMETV-RGDTEVVVDEVRPI 189

Query: 252 PL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDT----FLKQKIG-GRRENGKASGRM 305
           PL QH +    G  L+ + D   Q  +     + D      LKQ+    R ++ +  GR 
Sbjct: 190 PLWQHMMV---GRRLFDLFDTTAQDADPAARLVIDRDLVRHLKQRQSLDRYDSWQPRGR- 245

Query: 306 AKGGSGSGGSDIF---KIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEK 360
            +G + S G+      +++  + E    P I F FSR  C+        S+L   T E+ 
Sbjct: 246 GRGSAPSSGTRPLPRPEVIARLDEEGLLPAITFIFSRAGCDAAVAQCLRSRLRLTTDEQA 305

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           D + ++       L + D ++         L+RGIA HH+G+LP  +  VE LF +GLV+
Sbjct: 306 DEIARIIDKHTGELPKHDLSVLGYWEWREGLERGIAGHHAGMLPAFRHTVEELFVKGLVR 365

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G  ++
Sbjct: 366 AVFATETLALGINMPARTVVLERLVKYNGETHAELTPGEYTQLTGRAGRRGIDVEGHAVV 425

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    +E   +  +   +  PL S+FR SY   +NL+ R  G   A  +++ SF QFQ +
Sbjct: 426 LWQPGVEATEVAGLASTRTFPLRSSFRPSYNMSINLIDRM-GATEARALLERSFAQFQAD 484

Query: 541 KALPDIGKKVSKLEEEAASL--DASGE-AEVAEYHKLKLDIAQLEKKLMSEITRPER--- 594
           +++  + + + K +   A L  +  GE +E  EY +L+  I   E++L  +     R   
Sbjct: 485 RSVVGMVRSIEKDQRALAELREELGGEDSEYFEYAQLRERIRTRERQLERQGRTDRRSDA 544

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS--AGVGTLPSRGGGYIVPVQLPLIS 650
              L  L  G +I +  G    G  VV+     P+    +     +  G I     P  +
Sbjct: 545 VAALTALRRGDVIGIPTGRRS-GLAVVLEPDHDPTDPRPLVLTEDKWAGRISAADFPSPA 603

Query: 651 -TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
             L  +RL      R    R+ +  A++        G+  + P +  K + P   D   +
Sbjct: 604 KPLGTMRLPRHVQHRTARTRRDLASALRS------TGI--VVPNRYSKRKSPAASD--RE 653

Query: 710 IEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
           +  L   L  HP + + D  ++ R  +R   +  E+   + K+  +             R
Sbjct: 654 LATLRRALRDHPCHTAPDRERLSRIGERYNRLAREVDSKRQKV-AATTNSLARTFDRILR 712

Query: 769 VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           +L + G+ DADG V   G     + +  +LLV E + +GT+  L   ++A + S  +   
Sbjct: 713 LLAERGYTDADGGVTDDGHRLMRLYSESDLLVAECLRHGTWKGLSPAELAGVVSALVFES 772

Query: 829 KSSEQINLRMELAKPLQQ-LQESARKIAEIQNECKLEVNVDEYVESTVRP--FLMDVIYC 885
           +       R   A PLQ+ L E+ R  + ++ +      V   +  T  P    +  I+ 
Sbjct: 773 RQDAATADRGPTA-PLQRALGETVRLWSALRTD-----EVAHKLPLTREPDFGFVTAIHM 826

Query: 886 WSKGATFAEVI-----QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAAS 940
           WS+G   A+ +     +   +  G  +R  R++ + L+Q+    Q   +  +    A A 
Sbjct: 827 WSRGEPLADTLLAAGDRGQALSAGDFVRWCRQVIDLLDQVH---QTAPDPEVRSAAAKAV 883

Query: 941 ESLRRGIM 948
            ++RRG++
Sbjct: 884 GAIRRGVV 891


>gi|408533158|emb|CCK31332.1| putative helicase helY [Streptomyces davawensis JCM 4913]
          Length = 951

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 270/931 (29%), Positives = 449/931 (48%), Gaps = 77/931 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 47  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALS 106

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + + +  VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 107 NQKYSDLCRRYGNDKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLIGLGYVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  +L     ++     R  G+A     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEGEGSKKAVNPDLTRLARMEAQRPSYQDRRRGRAMREADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N +E +
Sbjct: 284 ERERRQRSRVWTPGRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEAR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 HKVRALVEERTASIPTEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGMSPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE       S    +    EY +L+ ++   E +L  +     R   
Sbjct: 523 KSVVGISRQVQRNEEGLEGYKESMTCHLGDFDEYARLRRELKDRETELARQGAAQRRAEA 582

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY------------ 640
              L  L  G +I V  G    G  +V++         G    R  G+            
Sbjct: 583 AVALEKLKPGDVIHVPTGKYA-GLALVLD--------PGLPAGRSNGHRGFDHHDGPRPL 633

Query: 641 ----------IVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                     +  +  P+ +  L ++R+    + R   +R+ +  A++      P     
Sbjct: 634 VLTAERQVKRLASMDFPVPVEALERMRIPKSFNPRSPQSRRDLASALRTKAGHIP----- 688

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
             P +  K       D   +I  L   + AHP +   D E+  R  +R   +  +  QL+
Sbjct: 689 --PERARKKRSQAADD--REIARLRTAIRAHPCHGCNDREDHARWAERYHRLLRDTSQLE 744

Query: 749 SKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            ++  R + I +  D +     +L +L ++ AD V +   R A L    D LL +E +  
Sbjct: 745 RRIEGRTNTIARTFDRIVA---LLTELDYLRADEVTEHGKRLARLYGELD-LLASECLRA 800

Query: 807 GTFNDLDHHQVAALASCFIPVDK-SSEQINLRMELAKPLQQLQESARKIAEIQN-ECKLE 864
           G +  L   ++AA  S  +   +   + +  ++   K    L E  R    +   E    
Sbjct: 801 GVWEGLAPAELAACVSALVYEARVGDDAMAPKLPSGKAKAALGEMVRIWGRLDALEEDFR 860

Query: 865 VNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           +N  E V     P L      Y W+ G    EV++  ++  G  +R  +++ + L Q+ A
Sbjct: 861 INQTEGV-GQREPDLGFAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQISA 919

Query: 923 AAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           AA +    ++ K    A + L RG++  +S+
Sbjct: 920 AAPSREGSSVAKAARKAVDQLLRGVVAYSSV 950


>gi|418474050|ref|ZP_13043578.1| helicase [Streptomyces coelicoflavus ZG0656]
 gi|371545339|gb|EHN73971.1| helicase [Streptomyces coelicoflavus ZG0656]
          Length = 950

 Score =  344 bits (882), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 265/939 (28%), Positives = 445/939 (47%), Gaps = 97/939 (10%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 47  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTTPIKALS 106

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 107 NQKYADLCRRYGADRVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  ++      +     R  G+A     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEAEGHKKAVNPDLTRMARLEASRPSYQDRRRGRAMKEADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N +  +
Sbjct: 284 ERERRQRSRVWTPSRPEVIERLDSEGLLPAITFIFSRAGCEAAVQQCLYAGLRLNDEGAR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           + V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 ERVRTLVEERTASIPREDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GE+ Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEFTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M    L  +   +  PL S+FR SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGMNPEHLAGLAGTRTYPLRSSFRPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE      AS    +    EY +L+ ++   E++L  +     R   
Sbjct: 523 KSVVGISRQVQRNEEGLEGYQASMTCHLGDFDEYARLRRELKDREQELARQGANQRRAEA 582

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY------------ 640
              L  L  G +I V  G    G  +V++         G    R  G+            
Sbjct: 583 AVALEKLKPGDVIHVPTGKYA-GLALVLD--------PGLPAGRSNGHRGFDHHDGPRPL 633

Query: 641 ----------IVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                     +  +  P+ +  L ++R+    + R   +R+ +  A++      P     
Sbjct: 634 VLTAERQVKRLASIDFPVPVEALDRMRIPKSFNARSPQSRRDLASALRTKAGHIP----- 688

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
             P +  K       D   +I  L   + AHP +   D E+  R  +R   +  +  QL+
Sbjct: 689 --PERARKKRSQAADD--REIARLRKAIRAHPCHGCDDREDHARWAERYHRLLRDTSQLE 744

Query: 749 SKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            ++  R + I +  D +     +L +L ++  D V +   R A L    D LL +E +  
Sbjct: 745 RRIEGRTNTIARTFDRIVA---LLTELDYLRGDEVTEHGKRLARLYGELD-LLASECLRE 800

Query: 807 GTFNDLDHHQVAALASCF--------------IPVDKSSEQINLRMELAKPLQQLQESAR 852
           G +  L   ++AA  S                +P  ++   +   + +   L  L+E  R
Sbjct: 801 GVWEGLSPAELAACVSALVYESRAADDAMAPKVPSGRAKAALGETVRIWGRLDALEEDFR 860

Query: 853 KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            I++ +   + E ++                Y W+ G    EV++  ++  G  +R  ++
Sbjct: 861 -ISQTEGVGQREPDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQ 909

Query: 913 LDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
           + + L Q+ AAA   G    +    A  E LR  + +S+
Sbjct: 910 VIDVLGQIAAAAPGAGSTVPKNARKAVDELLRGVVAYSS 948


>gi|354607342|ref|ZP_09025312.1| hypothetical protein HMPREF1003_01879 [Propionibacterium sp.
           5_U_42AFAA]
 gi|386024336|ref|YP_005942641.1| putative helicase HelY [Propionibacterium acnes 266]
 gi|422385793|ref|ZP_16465918.1| putative ATP-dependent RNA helicase [Propionibacterium acnes
           HL096PA3]
 gi|422449464|ref|ZP_16526189.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA3]
 gi|422481002|ref|ZP_16557405.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA1]
 gi|422483509|ref|ZP_16559898.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA1]
 gi|422488259|ref|ZP_16564588.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA2]
 gi|422490362|ref|ZP_16566677.1| DEAD/DEAH box helicase [Propionibacterium acnes HL020PA1]
 gi|422498131|ref|ZP_16574403.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA3]
 gi|422505892|ref|ZP_16582115.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA2]
 gi|422507318|ref|ZP_16583522.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA2]
 gi|422513760|ref|ZP_16589883.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA2]
 gi|422551862|ref|ZP_16627653.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA3]
 gi|422555896|ref|ZP_16631658.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA2]
 gi|422568274|ref|ZP_16643892.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA2]
 gi|313807138|gb|EFS45633.1| DEAD/DEAH box helicase [Propionibacterium acnes HL087PA2]
 gi|313819334|gb|EFS57048.1| DEAD/DEAH box helicase [Propionibacterium acnes HL046PA2]
 gi|313819983|gb|EFS57697.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA1]
 gi|313823224|gb|EFS60938.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA2]
 gi|313824987|gb|EFS62701.1| DEAD/DEAH box helicase [Propionibacterium acnes HL063PA1]
 gi|314924822|gb|EFS88653.1| DEAD/DEAH box helicase [Propionibacterium acnes HL036PA3]
 gi|314960620|gb|EFT04722.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA2]
 gi|314986240|gb|EFT30332.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA2]
 gi|314989545|gb|EFT33636.1| DEAD/DEAH box helicase [Propionibacterium acnes HL005PA3]
 gi|315086014|gb|EFT57990.1| DEAD/DEAH box helicase [Propionibacterium acnes HL002PA3]
 gi|327327909|gb|EGE69683.1| putative ATP-dependent RNA helicase [Propionibacterium acnes
           HL096PA3]
 gi|327443949|gb|EGE90603.1| DEAD/DEAH box helicase [Propionibacterium acnes HL013PA2]
 gi|328755038|gb|EGF68654.1| DEAD/DEAH box helicase [Propionibacterium acnes HL020PA1]
 gi|332675794|gb|AEE72610.1| putative helicase HelY [Propionibacterium acnes 266]
 gi|353557457|gb|EHC26826.1| hypothetical protein HMPREF1003_01879 [Propionibacterium sp.
           5_U_42AFAA]
          Length = 917

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|269836934|ref|YP_003319162.1| DEAD/DEAH box helicase [Sphaerobacter thermophilus DSM 20745]
 gi|269786197|gb|ACZ38340.1| DEAD/DEAH box helicase domain protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 962

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 284/964 (29%), Positives = 454/964 (47%), Gaps = 141/964 (14%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQR ++      +SV+V+A T  GKT VAE+ +  AFR   RV+YT+P+KALS
Sbjct: 18  YPFTLDPFQREAIETFLAGDSVMVAAPTGTGKTVVAEFGVYEAFRRGGRVMYTTPIKALS 77

Query: 133 NQKYRELHQEFKD-VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           NQK+R+L   + D VGL+TGD+T + +A  +VMTTE+LR ML +    L  V  +IFDE+
Sbjct: 78  NQKFRDLRVIYGDNVGLLTGDITENADAPIVVMTTEVLRNMLLQTPWELDAVDCIIFDEV 137

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ D ERG  WEE+II  P  I+++ LSAT+SNA + A+WI   H+ P H+V    R  
Sbjct: 138 HYIADPERGTTWEEAIILCPEHIQLICLSATVSNADEIAQWISRTHR-PIHLVTHYERAV 196

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSG 311
           PL  Y F      L+LV+DE                 +Q        G+   +M +GG  
Sbjct: 197 PLSLYYFL--DKKLHLVIDEHG---------------RQVADFPNTGGELRRQMMRGGLS 239

Query: 312 S--------GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE---K 360
           S             ++I++ +  +   P I F FSRR+CE +A   + +  N  ++   +
Sbjct: 240 SEQRRQAEQAEPPPWEIIRALQTQDMLPAIYFLFSRRDCEDYAQRFALMRPNLVKDDKIR 299

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             +  V +N +  +  EDR L  ++ +  L + GI  HH+GLLP++K+LVE+LF  GL++
Sbjct: 300 QEINTVVENYLSQMRLEDRELAQVQQIASLAQLGIGFHHAGLLPILKQLVEVLFSRGLMQ 359

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            +FAT+T A+G+NMPA++VV   + KWDG   R +   E+ QM+GRAGRRG D+RG  ++
Sbjct: 360 VVFATDTLALGVNMPARSVVIGRMTKWDGRRRRPLTPNEFQQMAGRAGRRGMDERGSVVV 419

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ-- 538
                M    + ++  G+  P+ S+F + Y ++LNL     G     H+++ S  QFQ  
Sbjct: 420 PYSPWMSFREMLEIATGELEPVRSSFAIRYNTVLNLWDPPHGT-RVRHMLQQSLSQFQTA 478

Query: 539 -----YEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQL---EKKLMSEI- 589
                 E  + ++G+++  + +        G+  + EY  L   I  L   E++L  E+ 
Sbjct: 479 RRVREIEDLIIEVGREIDAVPQGCLIGLDGGDELLDEYRGLNATINALRGRERRLQREVH 538

Query: 590 -------TRP---------ERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTL 633
                   RP          R    L +G ++ +R G    GW V +   +  S GVG  
Sbjct: 539 ALRLNLDQRPWPEPGRQALRRAFRELPAGVIVHLRRG----GWAVYLG--RAASGGVGLF 592

Query: 634 PS----------RGGGYIV----PVQLPLISTLSKIRLSVPPDLRPL---DARQSILLAV 676
            +          R   Y+      V++P  S L+++   V  D+RPL    A   I   V
Sbjct: 593 LTGHEVVLLAEYRQIDYLAAGEPAVEVP--SQLTELEEPV-EDVRPLIGQAALDEIWRQV 649

Query: 677 QELESRFPQGLPKLNPV-------KDMKI------------EDPEVVDLVNQIEELEHKL 717
            +LE      LP L+ +       ++ ++            E  E +  +N  E   H  
Sbjct: 650 ADLE------LPDLDALLAEHRAQQEARLASERARLEQELREHREQLQAIN-TERRNHPC 702

Query: 718 FAHPLNKSQDENQIRCFQ-------RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
              P  K    N  R  Q        +AE+  E+   + ++R   I+  RD       VL
Sbjct: 703 HTCPRRKEHQNNLKRVAQLERERAALQAELGRELTNEEERVR-RLIRGIRD-------VL 754

Query: 771 KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            + G++            A + DT + L++ E++  G  + L+   VA + S F   D+ 
Sbjct: 755 HRFGYLYRGYPTAKADTLANVFDT-NGLVICEMIDRGFLDKLNPADVAEVFSWF-AYDRD 812

Query: 831 SEQINL-----RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC 885
               N      R+ L +      E    +AE QN   +    ++     VR         
Sbjct: 813 FRFANTYSLPNRLVLLRRRLDDLEREILMAERQNNLFITTGHNDGFYGAVR--------A 864

Query: 886 WSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAA-AQAVGEVNLEKKFAAASESLR 944
           W  GAT + +++  ++ EG ++ +  +  + + Q+R   A A+ E  L      A   ++
Sbjct: 865 WCHGATVSRILEQIELSEGDLVLTFNKTLDLMRQVREMLAHAMPEHPLRDVLERAEALVK 924

Query: 945 RGIM 948
           R I+
Sbjct: 925 RDIV 928


>gi|407935789|ref|YP_006851431.1| helicase [Propionibacterium acnes C1]
 gi|407904370|gb|AFU41200.1| putative helicase [Propionibacterium acnes C1]
          Length = 917

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|291440653|ref|ZP_06580043.1| helicase [Streptomyces ghanaensis ATCC 14672]
 gi|291343548|gb|EFE70504.1| helicase [Streptomyces ghanaensis ATCC 14672]
          Length = 937

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 269/936 (28%), Positives = 441/936 (47%), Gaps = 86/936 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQIEACRALEEGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYADLCRRYGTDQVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  ++      +   G R  G+ + R A 
Sbjct: 211 VPLFQHVL--AGRRIYDLFEEGEGRKKAVNPDLTRMARLEASRPPWGDRRRGRGNMREAD 268

Query: 308 GGSGSGGSDIF------KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEE 359
                            ++++ +      P I F FSR  CE        + L  N +E 
Sbjct: 269 RERERRQRSRVWTPSRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEA 328

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +  V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLV
Sbjct: 329 RARVRALVEERTASIPAEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLV 388

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           KA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  +
Sbjct: 389 KAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAV 448

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ 
Sbjct: 449 VLWQRGMNPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQA 507

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER-- 594
           +K++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R  
Sbjct: 508 DKSVVGISRQVQRNEEGLEGYKASMTCHLGDFDEYARLRRELKDRETELARQGAAQRRAE 567

Query: 595 ---VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST 651
               L  L  G +I V  G         + +V  P    G      G        PL+ T
Sbjct: 568 SAVALERLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFDQHDGPRPLVLT 622

Query: 652 -------LSKI----------RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
                  L+ I          R+ +P    P   +       ++L S        + P +
Sbjct: 623 AERQVKRLASIDFPVPVEALERMRIPKSFNPRSPQSR-----RDLASALRTKAGHIAPER 677

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM-- 751
             K       D   +I  L   + AHP +   D E+  R  +R   +  +  QL+ ++  
Sbjct: 678 HRKKRSQAADD--REIARLRKAIRAHPCHGCDDREDHARWAERYHRLLRDTSQLERRIEG 735

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           R + I +  D +     +L ++ ++  D V +   R A L    D LL +E +  G +  
Sbjct: 736 RTNTIARTFDRIVA---LLTEMDYLRGDEVTEHGKRLARLYGELD-LLASECLREGVWEG 791

Query: 812 LDHHQVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
           L   ++AA  S  +              P  ++   +   + +   L  L+E  R I + 
Sbjct: 792 LAPAELAACVSALVYEARVSDDAMAPKLPSGRAKAALGEMVRIWGRLDALEEDFR-ITQT 850

Query: 858 QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
           +   + E ++                Y W+ G    EV++  ++  G  +R  +++ + L
Sbjct: 851 EGVGQREPDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVL 900

Query: 918 NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            Q+ AAA A     + K    A + L RG++  +S+
Sbjct: 901 GQISAAAPAAEGSTVAKNARKAVDGLLRGVVAYSSV 936


>gi|302546693|ref|ZP_07299035.1| putative ATP-dependent RNA helicase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302464311|gb|EFL27404.1| putative ATP-dependent RNA helicase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 949

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 284/936 (30%), Positives = 455/936 (48%), Gaps = 82/936 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y+F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 40  YAFALDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALTQGRKCFYTTPIKALS 99

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 100 NQKYADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLLGLGYVVMDE 159

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 160 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 218

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGK-ASGRMAKGG 309
            PL  +V    G  +Y + +EK     D   + +      ++  R EN + A GR  + G
Sbjct: 219 VPLWQHVL--AGRRMYDLFEEKSGRDGDQSGRREVNPDLVRLA-RMENSRPAFGRDKRRG 275

Query: 310 SGS-----------GGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSK 351
             +             S I+     +++  +      P I F FSR  CE        + 
Sbjct: 276 RNNMREADRERERRQRSRIWTPGRAEVIDRLDAEGLLPAITFIFSRAGCESAVQQCLYAG 335

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           L  N    +  V  + +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE
Sbjct: 336 LRLNDDAARAQVRAIVEERTAGIPDEDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVE 395

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
            LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG
Sbjct: 396 ELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRG 455

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G  +++    M+   L  +   +  PL S+F+ SY   +NL+S+  G+  +  +++
Sbjct: 456 IDVEGHAVVLWQRAMDPAALAGLAGTRTYPLRSSFKPSYNMAVNLVSQF-GRHRSRELLE 514

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKL--- 585
            SF QFQ +KA+  I ++V + +E      AS    +    EY +L+ ++   E ++   
Sbjct: 515 TSFAQFQADKAVVGISRQVQRNQEGLEGYRASMTCHLGDFDEYARLRRELKDRETEIARQ 574

Query: 586 --MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVP 643
                       L  L  G +I V  G         + +V  P    G      G     
Sbjct: 575 GAAQRRAAAAVALEKLRPGDVIHVPTGKF-----AGLALVLDPGLAAGRSNGHRGFEHHD 629

Query: 644 VQLPLIST-------LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL------ 690
              PL+ T       L+ I   VP  + PLD R  I    +    R PQ    L      
Sbjct: 630 GPRPLVLTAERQVKRLASIDFPVP--VEPLD-RMRI---PKSFNPRSPQSRRDLASALRT 683

Query: 691 ----NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQ 745
               + V+  + E     D   +I  L   + AHP +   D E+  R  +R   +  + +
Sbjct: 684 KAGHHDVRRHRKERSRAAD-DTEIARLRAAIRAHPCHGCSDREDHARWGERYHRLLRDTR 742

Query: 746 QLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
           QL+ ++  R + I +  D +     +L +L ++  D V  +  R A L    D LL +E 
Sbjct: 743 QLERRIEGRTNTIARTFDRI---CALLSELEYLRGDEVTDVGKRLARLYGELD-LLASEC 798

Query: 804 MFNGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQESAR---KIAEIQN 859
           + +G +  L   ++AA AS  +   +S++  +  ++        L E  R   ++  ++ 
Sbjct: 799 LRDGVWEGLKPAELAACASALVYESRSADDALPPKLPTGAAKAALGEMVRIWGRLDALEE 858

Query: 860 ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
           E K  +N  E V     P L      Y W+ G    EV++  D+  G  +R  ++L + L
Sbjct: 859 EHK--INQAEGV-GQREPDLGFAWAAYRWASGHGLDEVLREVDMPAGDFVRWCKQLIDVL 915

Query: 918 NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            Q+ AAA    + ++ +    A + L RG++  +S+
Sbjct: 916 GQIAAAAP---DGSVARNARKAVDGLLRGVVAYSSV 948


>gi|50842859|ref|YP_056086.1| superfamily II RNA helicase [Propionibacterium acnes KPA171202]
 gi|335053752|ref|ZP_08546583.1| DSHCT domain protein [Propionibacterium sp. 434-HC2]
 gi|387503755|ref|YP_005944984.1| superfamily II RNA helicase [Propionibacterium acnes 6609]
 gi|422456974|ref|ZP_16533636.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA1]
 gi|50840461|gb|AAT83128.1| superfamily II RNA helicase [Propionibacterium acnes KPA171202]
 gi|315105965|gb|EFT77941.1| DEAD/DEAH box helicase [Propionibacterium acnes HL030PA1]
 gi|333766421|gb|EGL43727.1| DSHCT domain protein [Propionibacterium sp. 434-HC2]
 gi|335277800|gb|AEH29705.1| superfamily II RNA helicase [Propionibacterium acnes 6609]
          Length = 917

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLLGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|332707434|ref|ZP_08427483.1| Superfamily II RNA helicase [Moorea producens 3L]
 gi|332353785|gb|EGJ33276.1| Superfamily II RNA helicase [Moorea producens 3L]
          Length = 920

 Score =  343 bits (881), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 267/917 (29%), Positives = 444/917 (48%), Gaps = 117/917 (12%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FELD FQ+ ++  L  ++SV+V A T +GKT + EY I  A     RV YT+PLKALS
Sbjct: 21  FPFELDEFQKQAIEALNHSQSVVVCAPTGSGKTLIGEYTIYRALSQGGRVFYTTPLKALS 80

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYR------GSEVLKEVA 184
           NQK R+   +F    VGL+TGD +++  AS LVMTTEI R MLY       G+ +L  V 
Sbjct: 81  NQKLRDFRAKFGADKVGLVTGDSSVNREASVLVMTTEIFRNMLYGTPIGQVGASMLG-VE 139

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            VI DE HYM DR+RG VWEESII+ PP I++V LSAT++N+ Q  +W+  +H     ++
Sbjct: 140 AVILDECHYMNDRQRGTVWEESIIYCPPDIQIVALSATVANSDQLTDWLNQVHGS-TQLI 198

Query: 245 YTDFRPTPLQHY-VFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
           Y+DFRP PL+ Y   P G   L            D+  K+ ++   ++   + ++G+  G
Sbjct: 199 YSDFRPVPLEFYFAHPKGIVSLL----------NDDQTKINNSLKTRRPKSKDKHGRPEG 248

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
                        I  +V  + +R+  P I F FSRR C++    M  +    ++E   +
Sbjct: 249 -----------PSISSVVSKLKKREMLPAIYFIFSRRGCDKAVDEMGPISLVNEQEAARL 297

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
           ++     +    E  R        +  L RGIA HH+G+LP  K LVE LFQ+GLVK +F
Sbjct: 298 KKRIDEFITKNPEAARTK-----QIDPLYRGIAAHHAGILPAWKGLVEELFQQGLVKVVF 352

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATET A G+NMPA+T V +++ K     HR + + E++QM+GRAGRRG D  G  + +  
Sbjct: 353 ATETLAAGINMPARTTVISSLSKRTDRGHRLLTASEFLQMAGRAGRRGMDTNGYVVTVQT 412

Query: 484 EQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF------ 537
                     +      PLVS F  +Y  +LNL+ +      A+ +++ SF Q+      
Sbjct: 413 PFEGAKEAAYLATAGADPLVSQFTPTYGMVLNLL-QTHSLPQAKELVERSFAQYLATLYL 471

Query: 538 -QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVL 596
              ++A+ ++  ++++++ + A +D    A +  Y KLK  + ++E++++ ++     V 
Sbjct: 472 KPQQQAITELTAELTRIDFQLAPVDV---AVMEGYQKLKEHL-KVERRILKDLQHQAEVS 527

Query: 597 YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLS--- 653
                 ++++  E G           V  P   V     +G G     Q P +  LS   
Sbjct: 528 VSKAVSQVLQQVESGAILYLKGKHVPVSSPVPAVLVSKQKGSG-----QFPYLVCLSAAN 582

Query: 654 KIRLSVPPDLRPLDARQSIL------LAVQELESRFPQG------------LPKLNPVKD 695
           +  ++   D+  LD    +        + ++  +   QG            +  L P++ 
Sbjct: 583 RWYVATTADVMGLDGFPEVADDQVSNGSTEDYSTGSTQGESSDIITLRYLDIGTLQPLEG 642

Query: 696 MKI---------EDPEVVDLVNQ-------------------IEELEHKLFAHPLNKSQD 727
           ++I         ED E   L NQ                   + +LE ++  H L +  +
Sbjct: 643 LEIKPGQVKGGNEDTEA--LANQVPTIAQLWVAPEVREQQGVVADLEGQMETHALRQWGN 700

Query: 728 ENQ-IRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKG 786
            +Q I+  +++  +  +I Q ++K R+ Q Q +  E  N   +LK+ G ++ D    + G
Sbjct: 701 PSQLIKRHKKRLFLQEQINQRQTKFREYQAQHWH-EFLNLIEILKESGSLE-DLTPTVLG 758

Query: 787 RAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKP 843
           + A  +   +EL +   M +G  +DLD HQ+AA  S  +   P   S        E+ + 
Sbjct: 759 QVAASVRGENELWLALAMLSGELDDLDPHQLAAACSAIVTETPRPDSWTNYKPSEEVLEA 818

Query: 844 LQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFE 903
           L  L+   R++ ++Q    + + V  + E      L+ +I  WS G ++ E+   + + E
Sbjct: 819 LGNLRRIRRQVFQLQRRYHVALPV--WSEDR----LIGLIEQWSLGKSWRELCGNSSLDE 872

Query: 904 GSIIRSARRLDEFLNQL 920
           G ++R  RR  + L+Q+
Sbjct: 873 GDVVRILRRTLDILSQI 889


>gi|335050744|ref|ZP_08543696.1| type III restriction enzyme, res subunit [Propionibacterium sp.
           409-HC1]
 gi|342212890|ref|ZP_08705615.1| type III restriction enzyme, res subunit [Propionibacterium sp.
           CC003-HC2]
 gi|422495407|ref|ZP_16571694.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA1]
 gi|313813294|gb|EFS51008.1| DEAD/DEAH box helicase [Propionibacterium acnes HL025PA1]
 gi|333769017|gb|EGL46171.1| type III restriction enzyme, res subunit [Propionibacterium sp.
           409-HC1]
 gi|340768434|gb|EGR90959.1| type III restriction enzyme, res subunit [Propionibacterium sp.
           CC003-HC2]
          Length = 917

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 289/942 (30%), Positives = 453/942 (48%), Gaps = 111/942 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +  F P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKVNFLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGNFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL-RMELAK---PLQQLQESA 851
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +L RM   K      QL+   
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGHLHRMPDGKSEAAESQLRAVR 824

Query: 852 RKIAEIQNECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSI 906
             I  ++ + ++E           RP  +D+      Y W+ GA    V+   D+  G  
Sbjct: 825 AGIGLLERDHRIE-----------RPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDF 871

Query: 907 IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           +R  R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 872 VRRVRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|386850164|ref|YP_006268177.1| ATP-dependent RNA helicase HelY [Actinoplanes sp. SE50/110]
 gi|359837668|gb|AEV86109.1| ATP-dependent RNA helicase HelY [Actinoplanes sp. SE50/110]
          Length = 918

 Score =  343 bits (880), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 274/925 (29%), Positives = 451/925 (48%), Gaps = 94/925 (10%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR-VIYTSPLKALS 132
            F+LD FQR S   LER   VLV A T AGKT V E+A+ +A R  +R   YT+P+KALS
Sbjct: 32  GFDLDDFQRESCEALERGNGVLVCAPTGAGKTVVGEFAVHLALRAGERKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQK+ +L + +    VGL+TGD  ++ +A  +VMTTE+LR MLY GS  LK +A+V+ DE
Sbjct: 92  NQKFHDLVERYGPDKVGLLTGDNVINADAPVVVMTTEVLRNMLYSGSSQLKNLAYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SN  +FA+W+  +  +   VV ++ RP
Sbjct: 152 VHYLADRFRGAVWEEVIIHLPASVTLVSLSATVSNYEEFADWLVTVRGE-TSVVVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS 310
            PL  ++  VG     L  D     + D   +L            R   +   R+  G  
Sbjct: 211 VPLWQHML-VGRRMFDLFHDADAARKHDVHPELL-----------RYTREMERRLELGER 258

Query: 311 GSGGSDIF------------KIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNT 356
            SG +               ++V  +      P I+F FSR  C+        + L    
Sbjct: 259 ASGWNGRGGRGRRWQPPPRAEVVDRLERAGLLPAILFIFSRAGCDAAVQQCLGAGLRLTD 318

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
            +E+  + ++ Q  V  +  ED ++      L  L+RG+A HH+G+LP  KE VE  F  
Sbjct: 319 PDERAEIRRIAQAKVASIPAEDLSVLGYWEWLDGLERGVAAHHAGMLPAFKEAVEECFVN 378

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVKA+FATET A+G+NMPA+ VV   + K++G++H  +  GEY Q++GRAGRRG D  G
Sbjct: 379 GLVKAVFATETLALGINMPARCVVLERLVKFNGEAHVDLTPGEYTQLTGRAGRRGIDVEG 438

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             +++   +++   +  +   +  PL S+FR SY   +NL+    G   +  ++++SF Q
Sbjct: 439 HAVVLWSPEVDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVGTV-GADKSRELLESSFAQ 497

Query: 537 FQYEKALPDIGKKVSKLEEEAASLDASG---EAEVAEYHKLKLDIAQLEKKLMSEITRPE 593
           FQ ++++  + ++V +  +   +  A       +  EY  L++ IA  EK +  +     
Sbjct: 498 FQADRSVVGLARQVQRNVDTMQTYGADAACHHGDFDEYFGLRVAIADREKAMARQGVAQR 557

Query: 594 R-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-------SRGGGYI 641
           R      L  +  G +I+V +G         + VV +P+AG    P        R  G +
Sbjct: 558 RSAANDSLSKVRIGDVIRVPQGRH-----AGLAVVLEPAAGGFGEPRPMVLTQDRWAGRV 612

Query: 642 VPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAV------QELESRFPQGLPKLNPVK 694
            P +    +  L+++R+    + R   AR+ +   V      +  + R  +G  + NP +
Sbjct: 613 SPAEFGGEVEVLARLRVPKNFNHRSPGARRDLAAQVSGTGLDRHPDRRRSRG--RANPGE 670

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM-- 751
           D             +I  L+ KL  HP +   + E+  R  +R+  +  +   L+ K+  
Sbjct: 671 DA------------EIALLKVKLRQHPCHACPEREDHARWAERRHRLQRDTDALRDKVAG 718

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           R   + +  D++ +   VL   G++  DG V   GR    I +  +LLV E +    +  
Sbjct: 719 RTGSLARTFDQVCS---VLTARGYLSHDGEVTEAGRTLGRIWSEADLLVAECLRQDVWAG 775

Query: 812 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
           L   ++AA  S  +   +S  +   R  +  P   + E+    A++  E   E    E+ 
Sbjct: 776 LAPEELAAAVSMVL--YESRREGEDRASV--PKGPISEAVDACAKLWTEIATEEG--EHG 829

Query: 872 ESTVR---PFLMDVIYCWSKGATFAEVIQM-----TDIFEGSIIRSARRLDEFLNQLRAA 923
            S  R   P  +  ++ W++G   A+V+        D+  G  +R AR++ + L Q+R A
Sbjct: 830 LSLTREPDPGFVWPMFRWARGEPLAKVLASGHNYDADMPAGDFVRWARQVLDLLGQIREA 889

Query: 924 AQAVGEVNLEKKFAAASESLRRGIM 948
             AV    +++    A  ++ RG++
Sbjct: 890 --AVASPGVKETARKAISAVNRGVL 912


>gi|419421527|ref|ZP_13961755.1| putative helicase [Propionibacterium acnes PRP-38]
 gi|422396796|ref|ZP_16476827.1| HelY [Propionibacterium acnes HL097PA1]
 gi|327329991|gb|EGE71745.1| HelY [Propionibacterium acnes HL097PA1]
 gi|379978018|gb|EIA11343.1| putative helicase [Propionibacterium acnes PRP-38]
          Length = 917

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 289/942 (30%), Positives = 453/942 (48%), Gaps = 111/942 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +  F P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKVNFLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL-RMELAK---PLQQLQESA 851
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +L RM   K      QL+   
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGHLHRMPDGKSEAAESQLRAVR 824

Query: 852 RKIAEIQNECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSI 906
             I  ++ + ++E           RP  +D+      Y W+ GA    V+   D+  G  
Sbjct: 825 AGIGLLERDHRIE-----------RPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDF 871

Query: 907 IRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           +R  R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 872 VRRVRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|410866605|ref|YP_006981216.1| Superfamily II RNA helicase [Propionibacterium acidipropionici ATCC
           4875]
 gi|410823246|gb|AFV89861.1| Superfamily II RNA helicase [Propionibacterium acidipropionici ATCC
           4875]
          Length = 919

 Score =  343 bits (880), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 270/916 (29%), Positives = 434/916 (47%), Gaps = 92/916 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A  YSF LD +Q  +   L+    VLV+A T AGKT V EYA  +A    ++  YT+P+
Sbjct: 8   FASGYSFGLDDYQLEACHHLDDGAGVLVAAPTGAGKTVVGEYATFLALESGRKCFYTTPI 67

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L + +  ++VGL+TGDV+++  A  +VMTTE+LR M+Y GS  L+ + W+
Sbjct: 68  KALSNQKYHDLVERYGAEEVGLLTGDVSVNSEAPLVVMTTEVLRNMIYAGSRTLEGLGWM 127

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ L  ++++V LSAT+SNA +F EW+  + +    VV +
Sbjct: 128 VMDEVHYLADRFRGPVWEEVILGLADSVRLVCLSATVSNAEEFGEWLDEV-RGDIRVVVS 186

Query: 247 DFRPTPLQHYV---------FPVGGSGLY---LVVDEKEQFREDNFVKLQDTFLKQKIGG 294
           + RP PL  +V         F     G     L+   +++ R       +      K  G
Sbjct: 187 ERRPVPLTQHVALAKRIVDLFAPDRPGTVNPDLLQVARQEARSQRDDGRRPRGRSGK--G 244

Query: 295 RRENGKASGRMAKGGSGSGGSDIFK----------IVKMIMERKFQPVIVFSFSRRECEQ 344
           RR     SGR     +     D  +          +V+ +      P I+F FSR+ C+ 
Sbjct: 245 RRTVSYGSGRFGGASAQRFERDDHRAPRNSPSRSQVVRALRRAHLLPAIIFVFSRQGCDA 304

Query: 345 HAMSMSKLD--FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
               +   D    + EE   + ++ +     L + +R     +  +   +RG+A HH+GL
Sbjct: 305 AVSQLMSSDVVLTSTEEARRLCEIAERHGAALTDAERRALGWDRFVSAFERGVAAHHAGL 364

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LPV+K +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q
Sbjct: 365 LPVVKAVVEEGFVNGLLKVVVATETLALGINMPARTVVIERLVKYNGQTHADITPGEYTQ 424

Query: 463 MSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG 522
           ++GRAGRRG D  G  ++     M+   +  +   +  PL S F  +Y   +NL+    G
Sbjct: 425 LTGRAGRRGIDVEGHAVVCWQPGMDPRAVAGLASRRTYPLRSAFTPTYNMAVNLVGTV-G 483

Query: 523 QFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIA 579
           +  A  V+++SF QFQ ++     G +  + E+  A   A+   ++    EY  ++  I+
Sbjct: 484 RQRAARVLEHSFAQFQIDRRSGPAGARRKENEKAIADYLAAAACDLGDFTEYASMREKIS 543

Query: 580 QLE--KKLMSEITRPERVLYYLGS---GRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +LE  +  +   +R   VL  L +   G +I V   G   GW V+V+    P        
Sbjct: 544 RLEAGQARLRRGSRDAEVLDSLSALDPGDVIAV-PSGPHAGWAVIVD----PG------- 591

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLD--ARQSILLAVQ 677
           +RG     P  L ++S    +RL                VPP   P D  AR+++  A+ 
Sbjct: 592 TRGRHGDRPNPLAMVSDRRVVRLGEHDIDSPVHRMVGVRVPPHFHPRDAAARKALGKALD 651

Query: 678 ELESRFPQGLPKLNPVKDMKIEDPEV-VDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQ 735
           +      +  P   P K      P+V   L  QI  L  +L AHP +   D E   R  +
Sbjct: 652 QATRNLEE--PAARPPK------PQVDARLTEQITALRAELRAHPCHSCPDRETHARFAE 703

Query: 736 RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV-VQLKGRAACLIDT 794
           R   +  E     +K R  +     D       VL+ LG+++  G+ V   GR    I +
Sbjct: 704 RAMALRRETDAATAKAR-RRSGSISDRFDRICLVLEALGYLEPGGLRVSDSGRVLSRIYS 762

Query: 795 GDELLVTELMFNGTFNDLDHHQVAALASCFI----PVDKSSEQINLRMELA--KPLQQLQ 848
             +L+  E +  G  + LD  Q+AA+ S  I    P D+  +  +   + A  + + +L+
Sbjct: 763 ELDLVTAEAIAEGVLDGLDPAQLAAVLSTLIFESRPADRRHQYGHWLPDPACEESVSRLR 822

Query: 849 ESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
               ++  ++ + +LE   D      +     ++ Y W+ GA    V++      G  +R
Sbjct: 823 AVRARVGRLERDHRLERPRD------LDTGFAEIAYQWASGAALDTVLEEGS-SAGDFVR 875

Query: 909 SARRLDEFLNQLRAAA 924
             R+L +   Q+  A 
Sbjct: 876 QMRQLADLAGQIAGAG 891


>gi|422486206|ref|ZP_16562562.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA2]
 gi|327443881|gb|EGE90535.1| DEAD/DEAH box helicase [Propionibacterium acnes HL043PA2]
          Length = 917

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 286/939 (30%), Positives = 450/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+    +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDE-GRGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTSGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|300864714|ref|ZP_07109568.1| DSH-like [Oscillatoria sp. PCC 6506]
 gi|300337280|emb|CBN54716.1| DSH-like [Oscillatoria sp. PCC 6506]
          Length = 899

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 274/913 (30%), Positives = 450/913 (49%), Gaps = 116/913 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQ+ ++A L+  +SV+V A T +GKT + EYAI  A    +RV YT+P
Sbjct: 12  DLKTLFPFELDDFQQEAIAALQAGKSVVVCAPTGSGKTLIGEYAIYRALNRGKRVFYTTP 71

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+   +F    VGL+TGD++ +  A  LVMTTEI R MLY G+ +      
Sbjct: 72  LKALSNQKLRDFRHQFGQDMVGLLTGDMSFNREAPILVMTTEIFRNMLY-GTPIGEVGTS 130

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L  V  V+ DE HYM DR+RG VWEESII+ P  +++V LSAT++N+ Q  +WI  +H  
Sbjct: 131 LTGVEAVVLDECHYMNDRQRGTVWEESIIYCPAEVQLVALSATVANSDQLTDWIGRVHG- 189

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
           P  ++Y+DFRP PLQ +       GL+ +++                   +K+  R    
Sbjct: 190 PTELIYSDFRPVPLQFHF--ANQKGLFPLLEAG----------------TKKVNARLVPK 231

Query: 300 KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
           K   +  +G       ++  I+  + +R   P I F FSR+ C++    M  L   T++E
Sbjct: 232 KKQQKETRGNIPV--PNLPDILSGLQQRDMLPAIYFIFSRKGCDRAVGEMGNLSLVTEKE 289

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
             ++ ++  + ++  N E R    +E   PL + G+A HH+G+LP  K LVE LF  GL+
Sbjct: 290 SASLRRIVDDFLE-RNPEARRAGQVE---PLYQ-GVAAHHAGILPAWKGLVEELFGMGLI 344

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D+ G  +
Sbjct: 345 KVVFATETLAAGINMPARTTVISTLSKRTDRGHRLLNASEFLQMAGRAGRRGMDEVGYVV 404

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF-- 537
            +            +       L S F  SY  +LNL+     +  A+ +++ SF Q+  
Sbjct: 405 TVQTPFEGAKEAAYLATAGADALSSQFTPSYGMVLNLLQTHTLE-EAKELVERSFGQYIS 463

Query: 538 ----QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPE 593
               Q ++A  DI K+  +L    A LD+SG+  +A   KL  +  +L+ ++  E    +
Sbjct: 464 TLHLQPQQAEIDILKR--ELGAIEAQLDSSGK-NIASLEKLLANYEKLQGRVKEE----K 516

Query: 594 RVLYYL-GSGRLIKVREGGTDWGWGVV----------VNVVKKPSAG------VGTLPSR 636
           R+L  L      I++++      + V+          V   K+P A       V  +P  
Sbjct: 517 RILKTLEQQAEEIRLKDMAVAVAFAVIGTVLSLKGKHVPTAKRPQAPALPAVLVAKIPGP 576

Query: 637 GGG------------YIVPV--------QLPLISTLSKIRLSVPPDLRPLDARQSILLAV 676
           G              Y+V +        ++P +S +    L VPP++       ++ L  
Sbjct: 577 GQAPYLVCLGRDNRWYVVAISDVAGLYAEIPRLSVVDS--LGVPPEM-------AMRLGQ 627

Query: 677 QELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQR 736
             L +     + +L P        PE +    +I  LE +L  HPL++  +   +   QR
Sbjct: 628 CRLGNEDTAAIARLIPEMPTPTPPPEAIAQQQRIAALEQQLENHPLHEWGNPASLLKRQR 687

Query: 737 K-----AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
           +      E++   QQL+ K       ++ +E  N   +L+  G +D      L G+A   
Sbjct: 688 RRGSLVKEISDRQQQLEKKR-----ARYWEEFLNLIAILQSFGCLDGLMPTML-GKACAA 741

Query: 792 IDTGDELLVTELMFNGTFNDLD-HHQVAALASCFIPVDK--SSEQINLRMELAKPLQQLQ 848
           I   +EL +   + +G FN+LD HH  AA A     V +  S  +  L  E+ + L  LQ
Sbjct: 742 IRGDNELWLGLSLMSGEFNELDPHHLAAACAGLVTEVSRPDSWTRYTLSPEVLEALDNLQ 801

Query: 849 ESARK-IAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
              R+ + ++Q+  + +V +  ++E  +    + ++  W+ G  + +++  T + EG ++
Sbjct: 802 RGLRRRVFQVQH--RHDVAIPIWLEREI----ITLVEQWALGVEWLDIVANTSLDEGDVV 855

Query: 908 RSARRLDEFLNQL 920
           R  RR  +FL+Q+
Sbjct: 856 RILRRTLDFLSQV 868


>gi|422493681|ref|ZP_16569981.1| DEAD/DEAH box helicase [Propionibacterium acnes HL086PA1]
 gi|313838257|gb|EFS75971.1| DEAD/DEAH box helicase [Propionibacterium acnes HL086PA1]
          Length = 917

 Score =  343 bits (879), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 285/939 (30%), Positives = 451/939 (48%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVTRHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
             L  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VALVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + ++  P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKVELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|70944320|ref|XP_742103.1| hypothetical protein [Plasmodium chabaudi chabaudi]
 gi|56520896|emb|CAH79803.1| hypothetical protein PC000529.03.0 [Plasmodium chabaudi chabaudi]
          Length = 364

 Score =  343 bits (879), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 150/247 (60%), Positives = 190/247 (76%), Gaps = 12/247 (4%)

Query: 37  SCVHEVAVPSGYALTK-DEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVL 95
           +C+H+   P  Y   K +E+I             A+TY FELD FQ+ S+ CLERNESVL
Sbjct: 103 NCIHKCVRPQSYVHNKLNESITP-----------ARTYKFELDTFQKKSIECLERNESVL 151

Query: 96  VSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEFKDVGLMTGDVTL 155
           VSAHTSAGKT +AEYAIA+  RDKQRVIYTSP+KALSNQKYR+L +EFKDVGL+TGD+++
Sbjct: 152 VSAHTSAGKTVIAEYAIALGLRDKQRVIYTSPIKALSNQKYRDLSEEFKDVGLITGDISI 211

Query: 156 SPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIK 215
           +P AS +VMTTEILR MLYRGS + KEV WVIFDEIHYM+DR+RGV+WEE+II LP  ++
Sbjct: 212 NPEASIIVMTTEILRSMLYRGSSLTKEVKWVIFDEIHYMRDRDRGVIWEETIILLPLMVR 271

Query: 216 MVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF 275
            +FLSAT+ N  QFAEW+  +  Q CH+VYTD+RPTPLQHY++P     ++L+ DE + F
Sbjct: 272 FIFLSATIPNGIQFAEWVSSIKNQACHIVYTDYRPTPLQHYIYPTSSESVFLICDENKNF 331

Query: 276 REDNFVK 282
           + DNF+K
Sbjct: 332 KRDNFIK 338


>gi|440701337|ref|ZP_20883532.1| DEAD/DEAH box helicase [Streptomyces turgidiscabies Car8]
 gi|440276000|gb|ELP64332.1| DEAD/DEAH box helicase [Streptomyces turgidiscabies Car8]
          Length = 908

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 273/938 (29%), Positives = 446/938 (47%), Gaps = 89/938 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 2   YEFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALLQGKKCFYTTPIKALS 61

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 62  NQKYSDLCRRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 121

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 122 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 180

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  R+    +  +L     ++     R+ G+A     +
Sbjct: 181 VPLFQHVL--AGRRMYDLFEEGEGSRKAVNPDLTRLARMEAQRPSFQDRKRGRAMREADR 238

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N  E +
Sbjct: 239 ERERRSRSRVWTPGRPEVIERLDSEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDEAR 298

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           + V  + +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 299 ERVRALVEERTASIPDEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 358

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 359 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 418

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M  + L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 419 LWQRGMSPDHLAGLAGTRTYPLRSSFKPSYNMAVNLVDQF-GRHRSRELLETSFAQFQAD 477

Query: 541 KALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRPER 594
           K++  I ++V + EE    LD   E+      +  EY  L+ D+   E  L  +     R
Sbjct: 478 KSVVGISRQVQRNEE---GLDGYKESMTCHLGDFEEYAALRRDLKDRETDLARQGAAQRR 534

Query: 595 -----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLI 649
                 L  L  G +I V  G         + +V  P    G      G        PL+
Sbjct: 535 AEAAVALEKLKPGDIIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFEQHDGPRPLV 589

Query: 650 STLSK-----IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN----------PVK 694
            T  +       +  P  + PL+     +   +    R PQ    L           P +
Sbjct: 590 LTAERQVKRLASMDFPVPVEPLER----MRVPKSFNPRSPQSRRDLASALRTKAGHIPPE 645

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM-- 751
             + +  +  D   +I  L   + AH  +   D E+  R  +R   +  +  QL+ ++  
Sbjct: 646 RARKQRAQAAD-DREIARLRTAIRAHACHGCNDREDHARWAERYHRLLRDTSQLERRIEG 704

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           R + I +  D +     +L +L ++ +D V +   R A L    D LL +E +  G +  
Sbjct: 705 RTNTIARTFDRIVA---LLTELDYLRSDEVTEHGKRLARLYGELD-LLASECLRAGVWEG 760

Query: 812 LDHHQVAALASCF--------------IPVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
           L   ++AA  S                +P  K+   +   + +   L  L+E  R I + 
Sbjct: 761 LSPAELAACVSALVYESRVADDAMAPKVPSGKAKAALGEMVRIWGRLDALEEEFR-ITQS 819

Query: 858 QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
           +   + E ++                Y W+ G    EV++  ++  G  +R  +++ + L
Sbjct: 820 EGVGQREPDLG----------FAWAAYEWASGKGLDEVLREAEMPAGDFVRWCKQVIDVL 869

Query: 918 NQLRAAAQAVGE--VNLEKKFAAASESLRRGIMFSNSL 953
            Q+ AAA   G     + K    A E L RG++  +S+
Sbjct: 870 GQISAAAPVSGSEGSTVAKNARKAVEGLLRGVVAYSSV 907


>gi|455649626|gb|EMF28422.1| helicase [Streptomyces gancidicus BKS 13-15]
          Length = 937

 Score =  342 bits (878), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 270/932 (28%), Positives = 442/932 (47%), Gaps = 78/932 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQVEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + +V+ DE
Sbjct: 92  NQKYADLCRRYGTGKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSGTLLGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  ++      +   G R  G+   R A 
Sbjct: 211 VPLFQHVL--AGRRMYDLFEEGEGHKKAVNPDLTRMARMEASRPSWGDRRRGRNGMREAD 268

Query: 308 GGSGSGGSDIF------KIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEE 359
                            ++++ +      P I F FSR  CE        + L  N +E 
Sbjct: 269 RERERRQRSRVWTPGRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLHAGLRLNDEEA 328

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +  V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLV
Sbjct: 329 RAKVRDLVEERTASIPPEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLV 388

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           KA+FATET A+G+NMPA++VV   + KW+G+ H  I  GE+ Q++GRAGRRG D  G  +
Sbjct: 389 KAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEFTQLTGRAGRRGIDVEGHAV 448

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ 
Sbjct: 449 VLWQRGMNPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQA 507

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER-- 594
           +K++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R  
Sbjct: 508 DKSVVGISRQVQRNEEGLEGYKASMTCHLGDFEEYARLRRELKDRENELARQGQMQRRAE 567

Query: 595 ---VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST 651
               L  L  G +I V  G         + +V  P    G      G        PL+ T
Sbjct: 568 AAVALEKLRPGDIIHVPTGKY-----AGLALVLDPGLPAGRANGHRGVEYHDGPRPLVLT 622

Query: 652 LSK--IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN-----------PVKDMKI 698
             +   RL+      P++A + + +  +   +R PQ    L            P +  K 
Sbjct: 623 AERQVKRLAAIDFPVPVEALERMRIP-KSFNARSPQSRRDLASALRTKAGHIVPDRHRKN 681

Query: 699 EDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQ 755
             P   D   +I  L   L AHP +  QD E+  R  +R   +  +  QL+ ++  R + 
Sbjct: 682 RAPAADD--REIARLRKALRAHPCHGCQDREDHARWAERYHRLLRDTSQLERRIEGRTNT 739

Query: 756 IQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
           I +  D +     +L ++ ++  D V +   R A L    D LL +E +    +  L   
Sbjct: 740 IARTFDRIVA---LLTEMDYLRGDEVTEHGKRLARLYGELD-LLASECLRERVWEGLGPA 795

Query: 816 QVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNEC 861
           ++AA  S  +              P  ++   +   + +   L  L+E  R I++ +   
Sbjct: 796 ELAACVSALVYESRVADDATAPKLPSGRAKAALGEMVRIWGRLDALEEDFR-ISQTEGVG 854

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           + E ++                Y W+ G    EV++  ++  G  +R  +++ + L Q+ 
Sbjct: 855 QREPDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQIS 904

Query: 922 AAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           AAA       + K    A + L RG++  +S+
Sbjct: 905 AAAPVAEGSTVAKNARRAVDGLLRGVVAYSSV 936


>gi|308177425|ref|YP_003916831.1| ATP-dependent RNA helicase [Arthrobacter arilaitensis Re117]
 gi|307744888|emb|CBT75860.1| putative ATP-dependent RNA helicase [Arthrobacter arilaitensis
           Re117]
          Length = 927

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 276/950 (29%), Positives = 474/950 (49%), Gaps = 75/950 (7%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YA +K   +    A P +   +    SF+LDPFQ  +   +    SVLV+A T AGKT V
Sbjct: 8   YANSKARQVENGTALPDFRASL----SFDLDPFQAEACQKVAEGHSVLVAAPTGAGKTVV 63

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMT 165
            EYAI  A R+ ++  YT+P+KALSNQKY EL   +  + VGL+TGD +++  A  +VMT
Sbjct: 64  GEYAIYQALRENRKAFYTTPIKALSNQKYSELVNRYGAQKVGLLTGDTSINSEAQIVVMT 123

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY  S+ L  + +VI DE+HY+ D+ RG VWEE II LP  ++++ LSAT+SN
Sbjct: 124 TEVLRNMLYADSQTLDGLGYVIMDEVHYLADKFRGAVWEEVIIHLPSNVQIISLSATVSN 183

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEK--EQFREDNFVKL 283
           A +F  W+  +  Q   ++ ++ RP PL  +V  VG + + L  ++   ++  ED+    
Sbjct: 184 AEEFGGWLDTVRGQ-TDIIVSEHRPVPLFQHVM-VGPNVVDLFAEDVAFDKVAEDDSKAS 241

Query: 284 QDTFLKQKIGGRRENGKASGRMAKGG-------SGSGGSDIFK--IVKMIMERKFQPVIV 334
            +  L++ +  R  N     +  +G        S   G  I +  ++  +      P I 
Sbjct: 242 VNPELRKLV--RTHNSGGRVQRGRGRGGRGPQRSAGMGHRINRPSVIGKLDRAGLLPAIF 299

Query: 335 FSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           F FSR+ C+      +M+ L   T EE   + Q        +  ED ++         L 
Sbjct: 300 FIFSRKGCDMAVQQCAMADLRLTTNEEAAEIAQALDEVAFRIPSEDLDVLEFWSWRDGLV 359

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RG A HH+GLLP+ KE+VE LF   L+K +FATET A+G+NMPA++VV   + K++G+SH
Sbjct: 360 RGFASHHAGLLPIFKEIVEDLFARNLIKVVFATETLALGVNMPARSVVLEKLVKFNGESH 419

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
             I SGEY Q++GRAGRRG D  G  I++ +  +E   L  +   +  PL S+FR +Y  
Sbjct: 420 VQISSGEYTQLTGRAGRRGIDVEGHSIVVWNPDLEPEALAGLASKRTYPLNSSFRPTYNM 479

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVA 569
             NL+++  G+     ++++SF Q+Q ++++  + ++V   EE  A    S E    +  
Sbjct: 480 STNLLAQF-GREQTRQILESSFAQYQADRSVVGMARQVRSKEESLAGYAKSMECHLGDFT 538

Query: 570 EYHKLKLDIAQLEKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVK 624
           EY KL+ ++AQ+EK    +      +  E+ L  +  G ++ +  GG  +G  V+V + K
Sbjct: 539 EYLKLQRNLAQVEKNAAKDRRNQRRSAAEQSLQSVIRGDVVDL-PGGRRFGRAVIVELDK 597

Query: 625 KPSAGVGTLPSRGGGYIVPVQLPLIST---------LSKIRLSVPPDLRPLDARQSILLA 675
                      R        QL  IST         +S+I++      R    R+ +  +
Sbjct: 598 ------AMYNPRHTVLTEEAQLRRISTEDLNGPVQIVSRIKVPKGFTGRAPKERRDLASS 651

Query: 676 VQE--LESRFPQGLPKLNPVKDMKIEDPEVVD-LVNQIEELEHKLFAHPLNKSQDENQ-I 731
           ++    ESR P+        +D +  D E  D    +I EL  +L  HP +   +++Q +
Sbjct: 652 LRNAIYESRPPR--------QDAQSFDFEGTDSFEREINELRLELKDHPCHACSEKDQHM 703

Query: 732 RCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHI-----DADGVVQLKG 786
           R   R  ++  + ++ +  +R  +      +     +VL++  ++       D  +   G
Sbjct: 704 RWADRYWKLKKDTEKARRAIR-GRTNTIATQFDKVCKVLEQFEYLMPANDGEDFELTGSG 762

Query: 787 RAACLIDTGDELLVTELMFNGTFNDLDHHQVAA-LASCFIPVDKSSEQINLRMELAKPLQ 845
           R    I    +LL ++++  G    L+  ++ A +AS      +  ++ + +M  +K + 
Sbjct: 763 RRLRRIYGDRDLLTSQILETGKLTALNAEELCAVVASLVYQARRDGDRADPKMPTSK-ID 821

Query: 846 QLQESARKIAEIQNECKLEVNVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQMTDIFE 903
           ++  S  KI    ++ +  +N+D     T  P   L+  +Y W++G++    ++ TD+  
Sbjct: 822 EIWNSTIKIWGELSDAEEALNLD----PTAPPESGLIWPMYKWARGSSLNSALRGTDLAP 877

Query: 904 GSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           G  +R A+++ + L+Q  A    +  + +   + A  +  R  + +SN L
Sbjct: 878 GDFVRWAKQVIDTLDQF-AKNTDLPPLLVRNAYKAVDQIKRGVVAYSNVL 926


>gi|254423688|ref|ZP_05037406.1| DSHCT domain family [Synechococcus sp. PCC 7335]
 gi|196191177|gb|EDX86141.1| DSHCT domain family [Synechococcus sp. PCC 7335]
          Length = 886

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 277/914 (30%), Positives = 446/914 (48%), Gaps = 132/914 (14%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + F LD FQ  ++A L + +S++V A T +GKT + EYAI  A    +RV YT+PLKALS
Sbjct: 8   FPFRLDDFQIDAIAALNQGQSIIVCAPTGSGKTLIGEYAIHRALEMGRRVFYTTPLKALS 67

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  Q F  + VGL+TGD +++  A  +VMTTEI R MLY G+ +      L++V 
Sbjct: 68  NQKLRDFQQAFGEESVGLLTGDSSVNREAPVVVMTTEIFRNMLY-GTTIGEVGTSLRDVQ 126

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            VI DE HYM DR+RG VWEES+I+ PP I++V LSAT+ N  Q  +WI  +H  P  ++
Sbjct: 127 AVILDECHYMNDRQRGTVWEESVIYCPPEIQLVGLSATIENGGQLTDWINEVHG-PTRLI 185

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y+D+RP PL ++ F V   G++ +++ +                K  I  R +N +   R
Sbjct: 186 YSDYRPVPL-NFHFAVE-KGIFPLLNNQ----------------KTSIHPRLKNYRKPPR 227

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             +G     G+ +  +V  +  +   P I F FSR+ C++   +++ ++  +  E + ++
Sbjct: 228 RQRGQKKKAGATLPGVVSQLQAKDMLPAIYFIFSRKGCDKAVQAVASMNLVSAAEAELLK 287

Query: 365 QVFQNAVDCLNEEDRNLPAIEL-MLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
           +     V+      RN  AI    L  L RG+A HH+G+LP  K LVE LFQ GL+K +F
Sbjct: 288 RRIDRFVE------RNPEAIRTNQLEPLYRGVAAHHAGILPAWKSLVEELFQAGLIKVVF 341

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATET A G+NMPA+T V  ++ K     HR + + E++QMSGRAGRRG D  G  ++ V+
Sbjct: 342 ATETLAAGINMPARTTVIASLSKRTDSGHRLLHASEFLQMSGRAGRRGMDVEG-HVVTVE 400

Query: 484 EQME-MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKA 542
              E       + L  P PLVS F  SY  +LNL+     +  A+ +I+ SF Q+     
Sbjct: 401 SPFEGAKEAASLALAPPDPLVSQFTPSYGMVLNLLQVHTAE-EAQELIERSFGQYLATLH 459

Query: 543 LPDIGKKVSKLEEEAASLDAS----GEAEVAEYHKLK---------LDIAQLEKKLMSEI 589
           L    K ++KLE++ A L        EA +AEY KL+         L I Q + +     
Sbjct: 460 LAPQKKAIAKLEQDIAVLQDQLAYIDEAALAEYEKLRGWLREEERLLKILQQQAEESIGT 519

Query: 590 TRPERVLYYLGS------GRLIKVREGGTDWGWGVVVNVVKKPS---------------- 627
             P  + + +        G+ IKV          V+V+ V  P                 
Sbjct: 520 LEPVAISFAMAGTVLSLKGKNIKVATPLP----AVLVSKVPGPGQFPFLVCLGANNRWYV 575

Query: 628 ---AGVGTLPSRGGGYIVPVQLPLISTLSKIR----LSVPPDL--RPLDARQSILLAVQE 678
                V  LP R  G          +  S++R    L+ P DL   P  +R+       E
Sbjct: 576 ATVKDVAALPERSAG----------TAGSRLRAADDLTPPVDLIYSPGKSRKG-----NE 620

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA 738
           + +     +P++  +   + + PEV +   +   +  KL  +P+  +Q EN       KA
Sbjct: 621 VSAAVAAKIPEITAI---ETQAPEVKEQQEKAAAVAQKLAQNPV--AQLENP------KA 669

Query: 739 EVNHEIQQLK-SKMRDSQIQKFRD-------ELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
            V  + + LK  + R  ++QK+ +       E  +  +VL+    ++ +   ++ G+   
Sbjct: 670 VVKQQKRLLKLEEERRDRLQKYENYTHHYWLEFVSLMQVLEDFECLEENTPTEM-GQLCA 728

Query: 791 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP----LQQ 846
            I   +EL +   + +G F+ L+  Q AA A   I ++ +     +R    +P    L  
Sbjct: 729 AIRGDNELWLGMALASGEFDALEPQQFAA-ACAGILMENNRSDTWIRYHATRPVLEALGG 787

Query: 847 LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSI 906
           L+   R+I + Q    +++ V  ++E      L+ ++  W+    +  +   T + EG +
Sbjct: 788 LRSLRRRIFQAQRRQDIQIPV--WLEED----LIALVEQWALETEWQVLCDNTSLDEGDV 841

Query: 907 IRSARRLDEFLNQL 920
           +R  RR  +FL+Q+
Sbjct: 842 VRLLRRTLDFLSQI 855


>gi|385676237|ref|ZP_10050165.1| ATP-dependent RNA helicase HelY [Amycolatopsis sp. ATCC 39116]
          Length = 910

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 280/926 (30%), Positives = 455/926 (49%), Gaps = 80/926 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A    F  D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 22  FADEAEFGFDDFQIRGCRALEDGHGVLVCAPTGAGKTVVGEFAVHLALAEGRKCFYTTPI 81

Query: 129 KALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L Q +    VGL+TGD  ++ NA  +VMTTE+LR MLY GS  + ++ +V
Sbjct: 82  KALSNQKYGDLVQRYGAGTVGLLTGDTAINGNAQIVVMTTEVLRNMLYAGSSAIDDLGYV 141

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DEIHY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 142 VMDEIHYLADRFRGAVWEEVILHLPEYVRVVGLSATVSNAEEFGEWLVTV-RGDTTVVVD 200

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--QKIGGRRENGKASGR 304
           + RP PL  ++  VG   L L  D+      D  +++    L+  +++G  R +  A+ R
Sbjct: 201 EHRPVPLWQHMM-VGNRLLDLFADDGS----DGELRMNPGLLRRVEEVG--RMHAPAALR 253

Query: 305 MAKGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHA--MSMSKLDFNT 356
             +GG        F+      ++  +      P IVF FSR  C+     ++ S L  NT
Sbjct: 254 RGRGGRTYSRGPRFRPPSRVDMITRLDAAGLLPAIVFIFSRAGCDAAVSQVTRSGLRLNT 313

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
            EE   V ++       L E D  +         L+ GIA HH+GLLP  KE VE LF  
Sbjct: 314 PEEAAEVRRIVDTRTKDLPEGDLGVLGYWEWREALENGIAGHHAGLLPAFKETVEELFVR 373

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVK +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G
Sbjct: 374 GLVKVVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEG 433

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             +++    ++ N +  +   +  PL S+FR  Y   +NL+++  G   A  +++ SF Q
Sbjct: 434 HAVVVWQPGVDPNAVAGLASTRTYPLRSSFRPGYNMAINLVAQL-GHEQARELLEQSFAQ 492

Query: 537 FQYEKALPDIGKKVSKLEEEAASLDASGEAEVA------EYHKLKLDIAQLEKKLMSEIT 590
           FQ ++++  + +++ K  E   +L    EA         +Y +L+  I+  EK L  + T
Sbjct: 493 FQADRSVVGLSRRIEKNRE---ALKGYAEAVTGDFDAMLDYVQLRKKISDREKALARQNT 549

Query: 591 RPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIS 650
              R    +    L K+R+G        V+ V     AG+  +   G   + PV+ P   
Sbjct: 550 AARRADTAVS---LEKLRKGD-------VIAVPAGRRAGLAVVIDPG---LDPVREPRPV 596

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAV---QELESRFPQGLPKL-NPVKDMKIEDP----- 701
            +++ R S P  L    A    L  +   + +E R P+    + + ++D  I  P     
Sbjct: 597 VVTEDRWSGPLSLSDFSAPVEPLGRIKLPKHIELRSPKTRRDIASHLRDSGISLPGRQKR 656

Query: 702 -EVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKF 759
               +   ++  L   L AHP +  ++ E  IR  +R   +  E +QL+ ++  +     
Sbjct: 657 RSGANEDGELAALRRALRAHPCHGLAEREANIRWVERYHRLAGETEQLERRVAATTHSLA 716

Query: 760 RDELKNRSRVLKKLGHI--DADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           R   + R+ +L + G++    D V +   R A L    D LL  E + +G +  L   ++
Sbjct: 717 RAFDRIRA-LLAERGYLAEGEDRVTEHGARLARLYSESD-LLAAECIRHGVWEGLTPPEL 774

Query: 818 AALASCFIPVDKSSEQINLRMELAKPLQQLQESAR---KIAEIQNECKLEVNVDEYVEST 874
           AA+ S  +   +       R+      +  QE+A+    +AE +   +L+    E     
Sbjct: 775 AAVVSTLVFEARRDSPGEPRLPAGGVPKAWQETAKIWTDLAEDERRHRLD-RTREPDAGF 833

Query: 875 VRPFLMDVIYCWSKGATFAEVIQMTD-----IFEGSIIRSARRLDEFLNQLRAA---AQA 926
             P     +Y W++G +  +V+   D     +  G  +R +R++ + L+Q++     A  
Sbjct: 834 AWP-----VYRWARGESLEKVLTAADANGQELSAGDFVRWSRQVVDLLDQIKTVLGKADP 888

Query: 927 VGEVNLEKKFAAASESLRRGIMFSNS 952
           VG+       A A ++LRRG++ + +
Sbjct: 889 VGDAA-----AQAVKALRRGVVAAGA 909


>gi|297198491|ref|ZP_06915888.1| ATP-dependent RNA helicase [Streptomyces sviceus ATCC 29083]
 gi|297147112|gb|EDY60182.2| ATP-dependent RNA helicase [Streptomyces sviceus ATCC 29083]
          Length = 947

 Score =  342 bits (878), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 271/933 (29%), Positives = 447/933 (47%), Gaps = 79/933 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 41  YDFGLDPFQIEACKALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALS 100

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 101 NQKYADLSRRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 160

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 161 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 219

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  +L     ++     R  G+A     +
Sbjct: 220 VPLFQHVL--AGRRMYDLFEEGEGNKKAVNPDLARLARMEAQRPSYQDRRRGRAMREADR 277

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S ++     ++++ +      P I F FSR  CE        + L  N  E +
Sbjct: 278 ERERRQRSKVWTPSRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDEAR 337

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 338 GRVRALVEERTASIPHEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 397

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 398 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 457

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +         L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 458 LWQRGSSPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 516

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R   
Sbjct: 517 KSVVGISRQVQRNEEGLDGYKASMTCHLGDFEEYAQLRRELKDRETELARQGVSQRRAEA 576

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGY------------ 640
              L  L  G +I V  G    G  +V++         G    R  G+            
Sbjct: 577 AVALEKLKPGDVIHVPTGKYA-GLALVLD--------PGLPAGRSNGHRGFEHHDGPRPL 627

Query: 641 ----------IVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPK 689
                     +  +  P+ +  L ++R+    + R   +R+ +  A++      P   P+
Sbjct: 628 VLTAERQVKRLASMDFPVPVEALERMRIPKSFNPRSPQSRRDLASALRTKAGHIP---PE 684

Query: 690 LNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
               K  +  D        +I  L   + AHP +   D E+  R  +R   +  +  QL+
Sbjct: 685 RARKKRAQAADD------REIARLRTAIRAHPCHGCNDREDHARWAERYHRLLRDTSQLE 738

Query: 749 SKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            ++  R + I +  D +     +L +L ++ AD V +   R A L    D LL +E +  
Sbjct: 739 RRIEGRTNTIARTFDRIVA---LLTELDYLRADEVTEHGKRLARLYGELD-LLASECLRE 794

Query: 807 GTFNDLDHHQVAALASCFIPVDK-SSEQINLRMELAKPLQQLQESARKIAEIQN-ECKLE 864
           G +  L   ++AA  S  +   +   + +  ++   K    L E  R    +   E    
Sbjct: 795 GVWEGLGPAELAACVSALVYESRVGDDAMAPKVPSGKAKAALGEMVRIWGRLDALEEDFR 854

Query: 865 VNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           +N  E V     P L      Y W+ G    EV++  ++  G  +R  +++ + L Q+ A
Sbjct: 855 INQTEGV-GQREPDLGFAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQISA 913

Query: 923 AAQAVG--EVNLEKKFAAASESLRRGIMFSNSL 953
           AA   G     + K    A + L RG++  +S+
Sbjct: 914 AAPVSGGEGSTVAKNARKAVDLLLRGVVAYSSV 946


>gi|384566291|ref|ZP_10013395.1| superfamily II RNA helicase [Saccharomonospora glauca K62]
 gi|384522145|gb|EIE99340.1| superfamily II RNA helicase [Saccharomonospora glauca K62]
          Length = 929

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 278/924 (30%), Positives = 446/924 (48%), Gaps = 73/924 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A   +F+ D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 40  FAADVAFDFDDFQIRGCEALEDGHGVLVCAPTGAGKTVVGEFAVHLALAEGRKCFYTTPI 99

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS  L ++ +V
Sbjct: 100 KALSNQKYGDLVERYGSDAVGLLTGDTSVNGGAQIVVMTTEVLRNMLYAGSTALDDLGYV 159

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 160 VMDEVHYLADRFRGAVWEEVILHLPSYVRVVGLSATVSNAEEFGEWLMEV-RGDTSVVVD 218

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           + RP PL  ++  VGG  L L         E    +L    L++     R +  A  R  
Sbjct: 219 EHRPVPLWQHML-VGGRMLDLFAGRHADTGE---ARLNPQLLRRVEDTARMHAPAGLRGR 274

Query: 307 KGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQE 358
                      ++      IV  +      P IVF FSR  C+        S L  NT E
Sbjct: 275 GRRGAPYRGPRYRPPSRVEIVDRLDSAGLLPAIVFIFSRAGCDAAVTQCVRSGLRLNTPE 334

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E + V ++       L + D  +         L++GIA HH+GLLP  KE VE LF  GL
Sbjct: 335 EAEEVRRIVDERTADLPQNDLAVLGYWEWREALEQGIAAHHAGLLPAFKETVEELFVRGL 394

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           VK +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G  
Sbjct: 395 VKVVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHA 454

Query: 479 IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ SF QFQ
Sbjct: 455 VVVWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAVNLVGRF-GAAKARELLEQSFAQFQ 513

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRP 592
            ++++  + +++ +  E   +L    +A      E+  Y  L+  ++  EK L  + T  
Sbjct: 514 ADRSVVGLSRRIERNTE---ALRGYADALTGDFDELRSYLALRKRVSDREKVLARQNTAA 570

Query: 593 ERV-----LYYLGSGRLIKVREGGTDWGWGVVVNV----VKKPSAGVGTLPSRGGGYIVP 643
            R      L  L  G +I V +G    G  VVV+       +P   V T   R  G +  
Sbjct: 571 RRAQTAQSLEKLRKGDVIAVPQGRRA-GLAVVVDPGVDQFDEPRPVVVT-EDRWSGALSL 628

Query: 644 VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P  +  L ++RL    +LR    R+ I  +++ L          L P +  K     
Sbjct: 629 SDFPAPVEPLGRLRLPKHVELRSPKTRRDIASSLRNL---------GLRPPRRRKWRSDA 679

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS--QIQKF 759
             D   ++ EL  +L AHP++   D E  +R  +R   +  E +QLK K+  +   + + 
Sbjct: 680 HSD--AELGELRRELRAHPVHGMADREANLRWVERYLRLEAETEQLKRKVAATTHSLARA 737

Query: 760 RDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            D ++   R+L + G++DADG  V   GR    + +  +LL  E +    ++ L   ++A
Sbjct: 738 FDRIR---RLLSERGYLDADGDTVTEHGRLLSRLYSESDLLAAECIRQRLWHGLAPAELA 794

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP- 877
           A+ S  +   +       ++         QE+ R   ++     +E      ++ T  P 
Sbjct: 795 AVVSTLVYEARRDSPAESKLPSGPVSTAWQETVRVWTDL-----VEDERRHRLDRTREPD 849

Query: 878 --FLMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAAQAVG-E 929
             F   V Y W++G +  +V+        ++  G  +R +R++ + L+Q++     +G E
Sbjct: 850 AGFAWPV-YRWARGESLEKVLTTAEMNGQELSAGDFVRWSRQVVDLLDQIK---DVLGKE 905

Query: 930 VNLEKKFAAASESLRRGIMFSNSL 953
             +      AS  LRRG++ +  +
Sbjct: 906 HPVGGAAGKASRLLRRGVVAAGEV 929


>gi|291443514|ref|ZP_06582904.1| ATP-dependent RNA helicase [Streptomyces roseosporus NRRL 15998]
 gi|291346461|gb|EFE73365.1| ATP-dependent RNA helicase [Streptomyces roseosporus NRRL 15998]
          Length = 946

 Score =  342 bits (877), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 277/949 (29%), Positives = 452/949 (47%), Gaps = 91/949 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+
Sbjct: 26  GPFREMYDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTT 85

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 86  PIKALSNQKYADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLSGLG 145

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 146 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVI 204

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKL-----QDTFLKQ 290
            ++ RP PL  +V  + G  +Y + +E           RE N   V+L     Q+T+  +
Sbjct: 205 VSEHRPVPLWQHV--MAGRRMYDLFEEGTDHGGRGAGRREVNPDLVRLARQESQNTYNPR 262

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECE-- 343
                R  GK      +         I+     +++  +      P I F FSR  CE  
Sbjct: 263 D----RRRGKMVREADRERERRQRGRIWTPGRPEVIDRLDNEGLLPAITFIFSRAGCEAA 318

Query: 344 -QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
            Q  M  + L  N ++ +  V ++ +     +  ED ++      L  L+RGIA HH+G+
Sbjct: 319 VQQCM-YAGLRLNDEDNRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGM 377

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q
Sbjct: 378 LPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQ 437

Query: 463 MSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG 522
           ++GRAGRRG D  G  +++    ++   L  +   +  PL S+FR SY   +NL+ +  G
Sbjct: 438 LTGRAGRRGIDVEGHAVVLWQRGLDPTALAGLAGTRTYPLRSSFRPSYNMAVNLVHQF-G 496

Query: 523 QFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKL 576
           +  +  +++ SF QFQ +K++  I ++V + EE    L+   E       +  EY +L+ 
Sbjct: 497 RHRSRELLETSFAQFQADKSVVGISRQVQRNEE---GLEGYKEGMTCHLGDFEEYARLRR 553

Query: 577 DIAQLEKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG 631
           D+   E +L  +            L  L  G +I V  G         + +V  P    G
Sbjct: 554 DLKDRETELAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAG 608

Query: 632 TLPSRGGGYIVPVQLPLISTLSK-----------------IRLSVPPDLRPLDARQSILL 674
                 G        PL+ T  +                  R+ VP    P   +     
Sbjct: 609 RANGHRGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPRSPQSR--- 665

Query: 675 AVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRC 733
             ++L S        + P +  K   P   D   +I  L  +L AHP +   + E+  R 
Sbjct: 666 --RDLASALRSKAGHIVPDRHRKKRAPAADD--REIARLRTELRAHPCHGCDEREDHARW 721

Query: 734 FQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
            +R   +  + +QL+ ++  R + I +  D +     +L +L ++  + V     R A L
Sbjct: 722 AERYHRLQRDTRQLEKRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTANGRRLARL 778

Query: 792 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQES 850
               D LL +E +  G +  L+  ++AA  S  +    ++ + +  ++        + E 
Sbjct: 779 YGELD-LLASECLREGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVAMGEM 837

Query: 851 ARKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSII 907
            R    +   E   ++N  E V     P L     +Y W+ G T  EV++  ++  G  +
Sbjct: 838 VRIWGRLDALEEDFKINQTEGV-GQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFV 896

Query: 908 RSARRLDEFLNQLRAAA---QAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           R  +++ + L Q+ AAA      G   + K    A +++ RG++  +S+
Sbjct: 897 RWCKQVIDVLGQVAAAAPRDAGEGASGVAKSARKAVDAVLRGVVAYSSV 945


>gi|125538171|gb|EAY84566.1| hypothetical protein OsI_05937 [Oryza sativa Indica Group]
          Length = 1290

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 177/411 (43%), Positives = 250/411 (60%), Gaps = 43/411 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +MA  Y FELD FQ+ ++  LE+ ESV V+AHTSAGKT VAEYA A+A +   R +YT+P
Sbjct: 379 DMAIEYPFELDKFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALATKHCTRAVYTAP 438

Query: 128 LKALSNQKYRELHQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVI 187
           +K +SNQKYR+   +F DVGL+TGDV++ P A+CL+MTTEILR MLYRG+++++++ WVI
Sbjct: 439 IKTISNQKYRDFCGKF-DVGLLTGDVSIRPEATCLIMTTEILRSMLYRGADIIRDIEWVI 497

Query: 188 FDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTD 247
           FDE+HY+ D ERGVVWEE II LP  I +V LSAT+ N  +FA+WI    ++  HV  T+
Sbjct: 498 FDEVHYVNDAERGVVWEEVIIMLPKHINIVLLSATVPNTVEFADWIGRTKQKKIHVTSTN 557

Query: 248 FRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ---KIG----------- 293
            RP PL+H +F    SG    + EK+ F    + + ++ F K+   K+G           
Sbjct: 558 KRPVPLEHCLF---YSGEVFKICEKDAFLTQGYREAKEVFKKKNSSKLGMKPGSKPGTTA 614

Query: 294 ------GRRENGKASGRMAK-------------------GGSGSGGSDIFKIVKMIMERK 328
                 GR  +  + GR  K                   G   S  S    ++  ++++ 
Sbjct: 615 VRAGTQGRNPDTSSRGRDQKNPKHHHASSSAAAVQQSTSGPRRSESSFWMPLINNLLKKS 674

Query: 329 FQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELML 388
             PV++F FS+  C++ A SM   D  +  EK  +      A   L   DRNLP +  + 
Sbjct: 675 LVPVVIFCFSKNRCDRSAESMFGADLTSNSEKSEIRLFCDKAFSRLKGSDRNLPQVVGIQ 734

Query: 389 PLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTV 439
            LL+RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TV
Sbjct: 735 SLLRRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTV 785



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 173/305 (56%), Gaps = 5/305 (1%)

Query: 652  LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIE 711
            + ++RL   P          +L+  Q   +++P  L   + +KD+K++D  +V+     +
Sbjct: 987  IDQVRLLEDPSKTVYSKTVQMLIKEQPDGNKYPAAL---DAIKDLKMKDMLLVENYYAYQ 1043

Query: 712  ELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVL 770
             L  K+  +  +   + +  I   + +     ++  LK +M D  +Q+   E + R  VL
Sbjct: 1044 RLLQKMSENKCHGCIKLKEHIALMKEQKVYKDQLNDLKYEMSDEALQQM-PEFQGRIDVL 1102

Query: 771  KKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKS 830
            K++ +ID+D VVQLKGR AC +++G+EL+ TE +F    +DL+  +  A+ S  +   ++
Sbjct: 1103 KEIHYIDSDLVVQLKGRVACEMNSGEELISTECLFENQLDDLEPEEAVAIMSALVFQQRN 1162

Query: 831  SEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGA 890
            + + +L  +LA   +++ ++A ++ ++Q E K+ V+ +EY    ++  L++V+Y W+KG 
Sbjct: 1163 TSEPSLTPKLADARKRIYDTAIRLGKLQREFKVPVDPEEYARDNLKFGLVEVVYEWAKGT 1222

Query: 891  TFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFS 950
             FA++ ++TD+ EG I+R+  RLDE   + R AA  +G   L KK   AS +++R I+F+
Sbjct: 1223 PFADICELTDVSEGLIVRTIVRLDETCREFRNAASIMGNSALHKKMETASNAIKRDIVFA 1282

Query: 951  NSLYL 955
             SLY+
Sbjct: 1283 ASLYV 1287


>gi|389864289|ref|YP_006366529.1| helicase helY [Modestobacter marinus]
 gi|388486492|emb|CCH88044.1| putative helicase helY [Modestobacter marinus]
          Length = 950

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 270/918 (29%), Positives = 440/918 (47%), Gaps = 96/918 (10%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
            F LDPFQ  +   LE    VLV A T AGKT V E+A+  A ++ ++  YT+P+KALSN
Sbjct: 28  GFSLDPFQVEACEALEEGSGVLVCAPTGAGKTVVGEFAVHKALQEGRKAFYTTPIKALSN 87

Query: 134 QKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QKY +L   +    VGL+TGD  ++ +A  +VMTTE+LR MLY  +  L ++ +V+ DE+
Sbjct: 88  QKYSDLCDRYGAAKVGLLTGDNAINGDAPVVVMTTEVLRNMLYADAPALTDLGYVVMDEV 147

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE II LP  +++V LSAT+SNA +FA+W+  + +    VV ++ RP 
Sbjct: 148 HYLADRFRGAVWEEVIIHLPEHVRLVSLSATVSNAEEFADWLVTV-RGDTKVVVSEVRPI 206

Query: 252 PLQHYVF------------PVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--QKIGGRRE 297
           PL  ++             P   +G +         RE     +    ++   +   R +
Sbjct: 207 PLWQHMLVGGRVFDLFALRPAAHAGEWEQTPRGLSTRERGRAVVDPELVRYVHEQERRHD 266

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMER----KFQPVIVFSFSRRECEQHAMS--MSK 351
           +    G     G G+           ++ER       P I F FSR  C+        S 
Sbjct: 267 SWHGGGGSGIRGGGNRPRYRPPSRPEVIERLDRAGLLPAITFVFSRNGCDAAVGQCLASG 326

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           +    + E+  + +V       L EED ++         L  G A HH+GL+P  KE VE
Sbjct: 327 MRLTDEVERSAIAEVIDRRTGSLPEEDLHVLGFWEWREGLLAGFAAHHAGLVPAFKETVE 386

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
             F  GLVKA+FATET A+G+NMPA+TVV   + KW+G++H  +  GEY Q++GRAGRRG
Sbjct: 387 ECFVRGLVKAVFATETLALGINMPARTVVLEKLVKWNGEAHADVTPGEYTQLTGRAGRRG 446

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G  +++    ++   +  +   +  PL S+FR SY   +NL+  A G+  A  ++ 
Sbjct: 447 IDIEGHAVVVWAPGVDPAVVAGLASTRTYPLRSSFRPSYNMAVNLVG-AFGRDRARELLA 505

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASLD-------ASGEAEVAEYHKLKLDIAQLEKK 584
           +SF QFQ ++++  + +  ++ EE+AA L        ++   +VA Y +L++++++ EK+
Sbjct: 506 SSFAQFQADRSVVGLARSAARHEEDAARLAKEMNDGLSAAVLDVAGYARLRMEVSEREKE 565

Query: 585 LMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVV----VNVVKKPSAGVGTLPS 635
           L  +     R      L  L +G +I+V  G    G  VV    V  + +P   V T   
Sbjct: 566 LSRDTQARRRADAAESLAALRAGDVIRVPSGRRQ-GLAVVLDPGVTEIAEPRPLVLT-ED 623

Query: 636 RGGGYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQ------ELESRFPQGLP 688
           +  G +  V  P  ++ L+++R+    + R   AR+ +   ++      +L +R  +G  
Sbjct: 624 KWAGRLASVDFPSPVTALARVRVPKNFNHRSPHARRDLAATLRTARVENDLGARRTRG-- 681

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQL 747
                +    +DP + D       L H L AHP++   D E ++R   R      E ++L
Sbjct: 682 -----RSAAADDPVLAD-------LRHALRAHPVHGLPDREERVRAADRWLREVREAERL 729

Query: 748 KSKMRDSQIQKFRDELKNRSRVLKKLGH----------IDADG-------VVQLKGRAAC 790
           + +M D +      +      VL++LG+          +  DG       VV   GR   
Sbjct: 730 RRQMAD-RTGSLTRQFDRTCDVLQELGYLLPAAVLPVEVPEDGVPPEESPVVTDAGRRLS 788

Query: 791 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQES 850
            I +  +LL  E +  G F  L+  ++AA  S  +   +        +   K    L E 
Sbjct: 789 RIWSETDLLTAECIRAGVFRGLNAAELAACVSALVFEARREGPGTPSVPAGKVSAALAEM 848

Query: 851 AR---KIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI-----QMTDIF 902
            R   ++A+++ E ++ V  +  +        +   Y W+ G T   V+       T++ 
Sbjct: 849 RRVQLQLADVEREHEVPVTRELDLG------FVWAAYRWADGQTLDRVLAGAEQAGTELS 902

Query: 903 EGSIIRSARRLDEFLNQL 920
            G  +R AR+L + L+QL
Sbjct: 903 GGDFVRWARQLVDLLDQL 920


>gi|290961699|ref|YP_003492881.1| helicase [Streptomyces scabiei 87.22]
 gi|260651225|emb|CBG74347.1| putative helicase [Streptomyces scabiei 87.22]
          Length = 949

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 274/919 (29%), Positives = 443/919 (48%), Gaps = 55/919 (5%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 47  YEFGLDPFQIEACQALESGKGVLVAAPTGSGKTIVGEFAVHLALEQGKKCFYTTPIKALS 106

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + +V+ DE
Sbjct: 107 NQKYSDLCRRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSRTLLGLGYVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTDVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  R+    +  ++      +     R  G+A     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEGEGNRKAVNPDLTRMARMEASRPSYQDRRRGRAMREADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S I+     ++++ +      P I F FSR  CE        + L  N  E +
Sbjct: 284 ERERRQRSRIWIPSRPEVIERLDSEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDENR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 LKVRALVEERTASIPHEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    +  + L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGLSPDHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPERV-- 595
           K++  I ++V + EE       S    +    EY +L+ ++   E  L  +     RV  
Sbjct: 523 KSVVGISRQVQRNEEGLEGYQESMTCHLGDFEEYARLRRELKDRETDLAKQGAAQRRVEA 582

Query: 596 ---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG--GYIVPVQLPLIS 650
              L  L  G +I V  G         + +V  P    G      G   +  P  L L +
Sbjct: 583 AVALERLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFEQHDGPRPLVLTA 637

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNP---------VKDMKIEDP 701
                RL+      P++A + + +  +    R PQ    L           V D   +  
Sbjct: 638 ERQVKRLASMDFPVPVEALERMRIP-KSFNPRSPQSRRDLASALRTKAGHLVPDRHRKRR 696

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQK 758
                  +I  L  +L AHP +   D E+  R  +R   +  +  QL+ ++  R + I +
Sbjct: 697 AAAADDREIARLRAELRAHPCHGCSDREDHARWAERYYRLKRDTAQLERRIEGRTNTIAR 756

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
             D +     +L +L ++ AD V +   R A L    D LL +E +  G +  L   ++A
Sbjct: 757 TFDRIVA---LLTELDYLRADEVTEHGKRLARLYGELD-LLASECLRAGVWEGLGPAELA 812

Query: 819 ALASCFIPVDKSSEQ-INLRMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYVESTVR 876
           A  S  +   ++++  +  ++        L E  R    +   E +  +   E V     
Sbjct: 813 ACVSALVYEARAADDAMAPKLPSGNAKAALGEMVRIWGRLDALEEEFRITQSEGV-GQRE 871

Query: 877 PFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
           P L      Y W+ G+   EV++  ++  G  +R  +++ + L Q+ AAA A   V   K
Sbjct: 872 PDLGFAWAAYMWASGSGLDEVLREVEMPAGDFVRWCKQVIDVLGQISAAAPAGSSVG--K 929

Query: 935 KFAAASESLRRGIMFSNSL 953
               A + L RG++  +S+
Sbjct: 930 NARKAVDELLRGVVAYSSV 948


>gi|411001332|ref|ZP_11377661.1| ATP-dependent RNA helicase [Streptomyces globisporus C-1027]
          Length = 926

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 275/948 (29%), Positives = 450/948 (47%), Gaps = 89/948 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+
Sbjct: 6   GPFREMYDFGLDPFQIEACKALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTT 65

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 66  PIKALSNQKYADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLSGLG 125

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 126 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVI 184

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKL-----QDTFLKQ 290
            ++ RP PL  +V  + G  +Y + +E           RE N   V+L     Q+T+  +
Sbjct: 185 VSEHRPVPLWQHV--MAGRRMYDLFEEGTDHGGRGAGRREVNPDLVRLARQESQNTYNPR 242

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQH 345
                R  GK      +         I+     +++  +      P I F FSR  CE  
Sbjct: 243 D----RRRGKMVREADRERERRQRGRIWTPGRPEVIDRLDNEGLLPAITFIFSRAGCEAA 298

Query: 346 AMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLL 403
                 + L  N ++ +  V ++ +     +  ED ++      L  L+RGIA HH+G+L
Sbjct: 299 VQQCLYAGLRLNDEDNRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGML 358

Query: 404 PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQM 463
           P  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q+
Sbjct: 359 PTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQL 418

Query: 464 SGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQ 523
           +GRAGRRG D  G  +++    ++   L  +   +  PL S+FR SY   +NL+ +  G+
Sbjct: 419 TGRAGRRGIDVEGHAVVLWQRGLDPTALAGLAGTRTYPLRSSFRPSYNMAVNLVQQF-GR 477

Query: 524 FTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLD 577
             +  +++ SF QFQ +K++  I ++V + EE    L+   E       +  EY +L+ D
Sbjct: 478 HRSRELLETSFAQFQADKSVVGISRQVQRNEE---GLEGYKEGMTCHLGDFEEYARLRRD 534

Query: 578 IAQLEKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT 632
           +   E +L  +            L  L  G +I V  G         + +V  P    G 
Sbjct: 535 LKDRETELAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAGR 589

Query: 633 LPSRGGGYIVPVQLPLISTLSKI-----------------RLSVPPDLRPLDARQSILLA 675
                G        PL+ T  +                  R+ VP    P   +      
Sbjct: 590 ANGHRGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALERMRVPKSFNPRSPQSR---- 645

Query: 676 VQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCF 734
            ++L S        + P +  K   P   D   +I  L  +L AHP +   + E+  R  
Sbjct: 646 -RDLASALRSKAGHIVPDRHRKGRAPAADD--REIARLRTELRAHPCHGCDEREDHARWA 702

Query: 735 QRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLI 792
           +R   +  + +QL+ ++  R + I +  D +     +L +L ++  + V     R A L 
Sbjct: 703 ERYHRLQRDTRQLEKRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTANGRRLARLY 759

Query: 793 DTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESA 851
              D LL +E +  G +  L+  ++AA  S  +    ++ + +  ++        + E  
Sbjct: 760 GELD-LLASECLREGVWEGLNPAELAACVSALVYEARQADDAVAPKLPAGPAKVAMGEMV 818

Query: 852 RKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIR 908
           R    +   E   ++N  E V     P L     +Y W+ G T  EV++  ++  G  +R
Sbjct: 819 RIWGRLDALEEDFKINQTEGV-GQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFVR 877

Query: 909 SARRLDEFLNQLRAAA---QAVGEVNLEKKFAAASESLRRGIMFSNSL 953
             +++ + L Q+ AAA      G   + K    A +++ RG++  +S+
Sbjct: 878 WCKQVIDVLGQVAAAAPRDAGEGASGVAKSARKAVDAVLRGVVAYSSV 925


>gi|239986574|ref|ZP_04707238.1| putative ATP-dependent RNA helicase [Streptomyces roseosporus NRRL
           11379]
          Length = 926

 Score =  342 bits (877), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 277/949 (29%), Positives = 452/949 (47%), Gaps = 91/949 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+
Sbjct: 6   GPFREMYDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTT 65

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 66  PIKALSNQKYADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLSGLG 125

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 126 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVI 184

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKL-----QDTFLKQ 290
            ++ RP PL  +V  + G  +Y + +E           RE N   V+L     Q+T+  +
Sbjct: 185 VSEHRPVPLWQHV--MAGRRMYDLFEEGTDHGGRGAGRREVNPDLVRLARQESQNTYNPR 242

Query: 291 KIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECE-- 343
                R  GK      +         I+     +++  +      P I F FSR  CE  
Sbjct: 243 D----RRRGKMVREADRERERRQRGRIWTPGRPEVIDRLDNEGLLPAITFIFSRAGCEAA 298

Query: 344 -QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
            Q  M  + L  N ++ +  V ++ +     +  ED ++      L  L+RGIA HH+G+
Sbjct: 299 VQQCM-YAGLRLNDEDNRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGM 357

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q
Sbjct: 358 LPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQ 417

Query: 463 MSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG 522
           ++GRAGRRG D  G  +++    ++   L  +   +  PL S+FR SY   +NL+ +  G
Sbjct: 418 LTGRAGRRGIDVEGHAVVLWQRGLDPTALAGLAGTRTYPLRSSFRPSYNMAVNLVHQF-G 476

Query: 523 QFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKL 576
           +  +  +++ SF QFQ +K++  I ++V + EE    L+   E       +  EY +L+ 
Sbjct: 477 RHRSRELLETSFAQFQADKSVVGISRQVQRNEE---GLEGYKEGMTCHLGDFEEYARLRR 533

Query: 577 DIAQLEKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG 631
           D+   E +L  +            L  L  G +I V  G         + +V  P    G
Sbjct: 534 DLKDRETELAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAG 588

Query: 632 TLPSRGGGYIVPVQLPLISTLSK-----------------IRLSVPPDLRPLDARQSILL 674
                 G        PL+ T  +                  R+ VP    P   +     
Sbjct: 589 RANGHRGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPRSPQSR--- 645

Query: 675 AVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRC 733
             ++L S        + P +  K   P   D   +I  L  +L AHP +   + E+  R 
Sbjct: 646 --RDLASALRSKAGHIVPDRHRKKRAPAADD--REIARLRTELRAHPCHGCDEREDHARW 701

Query: 734 FQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACL 791
            +R   +  + +QL+ ++  R + I +  D +     +L +L ++  + V     R A L
Sbjct: 702 AERYHRLQRDTRQLEKRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTANGRRLARL 758

Query: 792 IDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQES 850
               D LL +E +  G +  L+  ++AA  S  +    ++ + +  ++        + E 
Sbjct: 759 YGELD-LLASECLREGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVAMGEM 817

Query: 851 ARKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSII 907
            R    +   E   ++N  E V     P L     +Y W+ G T  EV++  ++  G  +
Sbjct: 818 VRIWGRLDALEEDFKINQTEGV-GQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFV 876

Query: 908 RSARRLDEFLNQLRAAA---QAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           R  +++ + L Q+ AAA      G   + K    A +++ RG++  +S+
Sbjct: 877 RWCKQVIDVLGQVAAAAPRDAGEGASGVAKSARKAVDAVLRGVVAYSSV 925


>gi|21220127|ref|NP_625906.1| helicase [Streptomyces coelicolor A3(2)]
 gi|6119673|emb|CAB59484.1| putative helicase [Streptomyces coelicolor A3(2)]
          Length = 950

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 272/955 (28%), Positives = 451/955 (47%), Gaps = 83/955 (8%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YA  +  A+    A   +     + Y F LDPFQ  +   LE  + VLV+A T +GKT V
Sbjct: 26  YAAARQRAVEQATALASFR----EMYDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIV 81

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMT 165
            E+A+ +A +  ++  YT+P+KALSNQKY +L + +    VGL+TGD +++  A  +VMT
Sbjct: 82  GEFAVHLALQQGRKCFYTTPIKALSNQKYADLCRRYGTDKVGLLTGDNSVNSEAPVVVMT 141

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY GS+ L  +  V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SN
Sbjct: 142 TEVLRNMLYAGSQTLLGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSN 201

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVK 282
           A +F +W+  + +    V+ ++ RP PL  +V    G  +Y + +E E  ++    +  +
Sbjct: 202 AEEFGDWLDTV-RGDTQVIVSEHRPVPLFQHVL--AGRRMYDLFEEAEGHKKAVNPDLTR 258

Query: 283 LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSF 337
           +      +     R  G+A     +       S ++     ++++ +      P I F F
Sbjct: 259 MARLEASRPSYQDRRRGRAMKEADRERERRQRSRVWTPSRPEVIERLDSEGLLPAITFIF 318

Query: 338 SRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SR  CE        + L  N +  ++ V  + +     +  ED ++      L  L+RGI
Sbjct: 319 SRAGCEAAVQQCLYAGLRLNDEGARERVRALVEERTSSIPREDLHVLGYYEWLEGLERGI 378

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
           A HH+G+LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I
Sbjct: 379 AAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADI 438

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             GE+ Q++GRAGRRG D  G  +++    M    L  +   +  PL S+F+ SY   +N
Sbjct: 439 TPGEFTQLTGRAGRRGIDVEGHAVVLWQRAMNPEHLAGLAGTRTYPLRSSFKPSYNMAVN 498

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYH 572
           L+ +  G+  +  +++ SF QFQ +K++  I ++V + EE      AS    +    EY 
Sbjct: 499 LVDQF-GRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLEGYKASMTCHLGDFDEYA 557

Query: 573 KLKLDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
           +L+ ++   E++L  +     R      L  L  G +I V  G    G  +V++    P 
Sbjct: 558 RLRRELKDREQELARQGANQRRAEAAVALEKLKPGDVIHVPTGKYA-GLALVLD----PG 612

Query: 628 AGVGTLPSRGGGYIVPVQLPLIST-------LSKIRLSVPPDL-------RPLDARQSIL 673
              G      G        PL+ T       L+ I   VP +        +  +AR    
Sbjct: 613 LPAGRSNGHRGFDHHDGPRPLVLTAERQVKRLASIDFPVPVEALDRMRIPKSFNARSP-- 670

Query: 674 LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIR 732
            + ++L S        + P +  K       D   +I  L   + AHP +   D E+  R
Sbjct: 671 QSRRDLASALRSKAGHITPERARKKRSQAADD--REINRLRKAIRAHPCHGCDDREDHAR 728

Query: 733 CFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
             +R   +  +  QL+ ++  R + I +  D +     +L +L ++  D V +   R A 
Sbjct: 729 WAERYHRLLRDTSQLERRIEGRTNTIARTFDRIVA---LLTELDYLRGDEVTEHGKRLAR 785

Query: 791 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCF--------------IPVDKSSEQINL 836
           L    D LL +E +  G +  L   ++AA  S                +P  ++   +  
Sbjct: 786 LYGELD-LLASECLREGVWEGLSPAELAACVSALVFESRAADDATAPKVPSGRAKAALGE 844

Query: 837 RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
            + +   L  L+E  R I++ +   + E ++                Y W+ G    EV+
Sbjct: 845 TVRIWGRLDALEEDFR-ISQTEGVGQREPDLG----------FAWAAYMWASGKGLDEVL 893

Query: 897 QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
           +  ++  G  +R  +++ + L Q+ AAA   G    +    A  E LR  + +S+
Sbjct: 894 REVEMPAGDFVRWCKQVIDVLGQISAAAPGAGSTVPKNARKAVDELLRGVVAYSS 948


>gi|453052611|gb|EMF00090.1| ATP-dependent RNA helicase [Streptomyces mobaraensis NBRC 13819 =
           DSM 40847]
          Length = 938

 Score =  342 bits (876), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 289/953 (30%), Positives = 457/953 (47%), Gaps = 73/953 (7%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YAL K  A     A   +     + Y FELDPFQ  +   LE  + VLV+A T +GKT V
Sbjct: 11  YALAKRRAAEQATALASFR----EMYDFELDPFQIDACKALEAGKGVLVAAPTGSGKTIV 66

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMT 165
            E+A+ +A R+ ++  YT+P+KALSNQKY +L + +    VGL+TGD +++ +A  LVMT
Sbjct: 67  GEFAVHLALREGRKCFYTTPIKALSNQKYNDLVKRYGAAKVGLLTGDNSVNSDAPVLVMT 126

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY GS+ L  +  V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SN
Sbjct: 127 TEVLRNMLYAGSQALNGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSN 186

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ--------FRE 277
           A +F +W+  + +    V+ ++ RP PL  +V    G  +Y + +EK           RE
Sbjct: 187 AEEFGDWLDTV-RGDTEVIVSEHRPVPLWQHVL--AGRRMYDLFEEKTGPDGTPVTGRRE 243

Query: 278 DN-----FVKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPV 332
            N       +++++        RR       R  +  S        ++++ +      P 
Sbjct: 244 VNPDLVRLARMENSRPMGGRDRRRGREADRERERRQRSRIWTPSRVEVIERLDAEGLLPA 303

Query: 333 IVFSFSRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           I F FSR  CE        + L  N  + +  V ++ +     + +ED ++      L  
Sbjct: 304 ITFIFSRAGCESAVQQCLYAGLRLNDDDARRRVREIVEERTASIPDEDLHVLGYFEWLEG 363

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           L+RGIA HH+G+LP  KE+VE LF +GLVKA+FATET A+G+NMPA++VV   + KW+G+
Sbjct: 364 LERGIAAHHAGMLPTFKEVVEELFVKGLVKAVFATETLALGINMPARSVVLEKLVKWNGE 423

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
            H  I  GEY Q++GRAGRRG D  G  +++    M+   L  +   +  PL S+F+ SY
Sbjct: 424 QHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGMDPGALAGLAGTRTYPLRSSFKPSY 483

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA- 569
              +NL+S+  G+  +  +++ SF QFQ ++++  I ++V K EE  A    +    +  
Sbjct: 484 NMAVNLVSQF-GRHRSRELLETSFAQFQADRSVVGISRQVQKNEEGLAGYREAITCHLGD 542

Query: 570 --EYHKLKLDIAQLEKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNV 622
             EY +L+ ++ + E +L  +            L  L  G +I V  G         + +
Sbjct: 543 FDEYARLRRELKERETELAKQGAAQRRAAAAAALEKLKPGDVIHVPTGKF-----AGLAL 597

Query: 623 VKKPSAGVGTLPSRG-GGYIVPVQLPLISTLSKIRLSV---PPDLRPLDARQSILLAVQE 678
           V  P     T   RG   Y  P  L L +     RL+    P  + PL+ R  I    + 
Sbjct: 598 VLDPGLPGRTDRHRGWDAYDGPRPLVLTAERQVKRLAALDFPVPVEPLE-RMRI---PRT 653

Query: 679 LESRFPQGLPKLN-----------PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD 727
              R PQ    L            P +  K     V D   +I  L   + AHP +   +
Sbjct: 654 FNPRSPQSRRDLASALRTKAGHIVPERHRKGRSAAVDD--AEISRLRTAIRAHPCHGCDE 711

Query: 728 -ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQL 784
            E+  R  +R   +  + +QL+ ++  R + I +  D +     +L  L ++  D V + 
Sbjct: 712 REDHARWAERYHRLLRDTRQLERRIEGRTNTIARTFDRI---CALLTDLDYLRNDEVTEH 768

Query: 785 KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKP 843
             R A L    D LL +E +  G ++ L   ++AA AS  +     S + +  ++     
Sbjct: 769 GRRLARLYGELD-LLASECLREGVWDGLAPAELAACASALVYEARMSDDAVAPKLPSGAA 827

Query: 844 LQQLQESARKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTD 900
              L E  R    +   E    +N  E V     P L      Y W+ G    EV++  +
Sbjct: 828 KAALGEMVRIWGRLDALEEAHRINQAEGV-GQREPDLGFAWAAYRWASGHGLDEVLREIE 886

Query: 901 IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           +  G  +R  ++L + L Q+ AAA     V    +   A + L RG++  +S+
Sbjct: 887 MPAGDFVRWTKQLIDVLGQIAAAAPHGSPVARNAR--KAVDGLLRGVVAYSSV 937


>gi|357414385|ref|YP_004926121.1| DSH domain-containing protein [Streptomyces flavogriseus ATCC
           33331]
 gi|320011754|gb|ADW06604.1| DSH domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 942

 Score =  342 bits (876), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 270/948 (28%), Positives = 456/948 (48%), Gaps = 93/948 (9%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+
Sbjct: 26  GPFREMYEFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGRKCFYTT 85

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 86  PIKALSNQKFADLVRRYGADKVGLLTGDNSVNADAPVVVMTTEVLRNMLYAGSQALTGLG 145

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 146 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVI 204

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------RE--DNFVKLQDTFLKQKIGGR 295
            ++ RP PL  +V  + G  +Y + +E+          RE   + V+L     ++    R
Sbjct: 205 VSEHRPVPLWQHV--MAGRRMYDLFEEETDHGGRGTGRREVSPDLVRLARMENQRGYNPR 262

Query: 296 -RENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS- 348
            R  GK      +       S I+     +++  +      P I F FSR  C+      
Sbjct: 263 ERRRGKMVREADRERERRQRSRIWTPSRPEVIDRLDAEGLLPAITFIFSRAGCQAAVQQC 322

Query: 349 -MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             + L  N ++++  V ++ +     +  ED ++      L  L+RGIA HH+G+LP  K
Sbjct: 323 LQAGLRLNDEDKRQLVREIVEERTASIPPEDLHVLGYYEWLEGLERGIAAHHAGMLPTFK 382

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRA
Sbjct: 383 EVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRA 442

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +++    M+   L  +   +  PL S+FR SY   +NL+ +  G+  + 
Sbjct: 443 GRRGIDVEGHAVVLWQRGMDPGALAGLAGTRTYPLRSSFRPSYNMAVNLVQQF-GRHRSR 501

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKK 584
            +++ SF QFQ ++++  I ++V + EE  A         +    EY +L+ D+   E +
Sbjct: 502 ELLETSFAQFQADRSVVGISRQVQRNEEGLAGYKEGMTCHLGDFEEYARLRRDLKDRETE 561

Query: 585 LMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGG 639
           L  +            L  L  G +I V  G         + +V  P    G      G 
Sbjct: 562 LAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAGRTDRHRGL 616

Query: 640 YIVPVQLPLIST-------LSKI----------RLSVPPDLRPLDARQSILLAVQELESR 682
                  PL+ T       L+ I          R+ VP    P   +       ++L S 
Sbjct: 617 EYHDGPRPLVLTAERQVKRLAHIDFPVPVEPLERMRVPKSFNPRSPQSR-----RDLASA 671

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVN 741
                  ++P +  K       D   +I  L  +L AHP +   + E+  R  +R   + 
Sbjct: 672 LRSKAGHIDPGRHRKQRAAAADD--REIARLRTELRAHPCHGCDEREDHARWAERYHRLQ 729

Query: 742 HEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            + +QL+ ++  R + I +  D +     +L +L ++  + V +   R A L    D LL
Sbjct: 730 RDTRQLEHRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTENGRRLARLYGELD-LL 785

Query: 800 VTELMFNGTFNDLDHHQVAALASCFI--------------PVDKSSEQINLRMELAKPLQ 845
            +E + +G +  L+  ++AA  S  +              P   +   +   + +   L 
Sbjct: 786 ASECLRDGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKAAMGEMVRIWGRLD 845

Query: 846 QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            L+E   KI++ +   + E ++               +Y W+ G +  EV++  ++  G 
Sbjct: 846 ALEEEF-KISQTEGVGQREPDLG----------FAWAVYMWASGRSLDEVLREAEMPAGD 894

Query: 906 IIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            +R  +++ + L Q+ AAA   G  ++ K    A +++ RG++  +S+
Sbjct: 895 FVRWCKQVIDVLGQIAAAAPRDGS-SVAKNAHKAVDAVLRGVVAYSSV 941


>gi|113476965|ref|YP_723026.1| DSH-like [Trichodesmium erythraeum IMS101]
 gi|110168013|gb|ABG52553.1| DSH-like [Trichodesmium erythraeum IMS101]
          Length = 905

 Score =  342 bits (876), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 269/896 (30%), Positives = 448/896 (50%), Gaps = 88/896 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + F+LD FQ+ ++A L   +SV+V A T +GKT + EYAI  A    QRV YT+PLKALS
Sbjct: 17  FPFQLDEFQKQAIAALNAGKSVVVCAPTGSGKTLIGEYAIYRALSRGQRVFYTTPLKALS 76

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  + F  + VGL+TGD +++  AS LVMTTEI R MLY G+ +      L++V 
Sbjct: 77  NQKLRDFRKLFGPEKVGLVTGDTSVNREASVLVMTTEIFRNMLY-GTHIGEVGASLEKVE 135

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESII+ PP I+++ LSAT++N+ Q  +WI  +H  P  ++
Sbjct: 136 AVVLDECHYMNDRQRGTVWEESIIYCPPEIQLLALSATVANSDQLTDWILRVHG-PTELI 194

Query: 245 YTDFRPTPLQHYVFPVGGS-GLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
           Y+DFRP PL+   F    S GL+ +++                   QK    +   K+  
Sbjct: 195 YSDFRPVPLK---FNFSNSKGLFSLLNS-----------------NQKRINPQLKPKSRQ 234

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQ---HAMSMSKLDFNTQEEK 360
                        +  ++  + ER   P I F FSRR C +       +S L     EE 
Sbjct: 235 PKTDKKDKKEEPALSTVLSQLQERDMLPAIYFIFSRRGCARAVAEIAQLSNLTLVNPEEA 294

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             ++++ Q  +    + + +L   + + P L RGIA HH+G+LPV K LVE LFQ+GL+K
Sbjct: 295 AKLQKLVQKFL----QRNPDLGKSQQLEP-LTRGIAAHHAGMLPVWKGLVEELFQQGLIK 349

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            +FATET A G+NMPA+T V +++ K   D HR +   E++QM+GRAGRRG D +G  + 
Sbjct: 350 VVFATETLAAGINMPARTTVISSLSKRTDDGHRLLKPSEFLQMAGRAGRRGMDIQGYVVT 409

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +      +     +      PLVS F  SY  +LNL+     Q  A+ +++ SF Q+   
Sbjct: 410 VQTRFEGVKEAAYLATSGADPLVSQFTPSYGMVLNLLQTHTLQ-EAKDLVERSFGQYLST 468

Query: 541 KALPDIGKKVSKLEEEAASLDAS-GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYL 599
            +L    K++   E+E  +L+   G  E  ++  L+  +A  E KL  ++   +R+L  L
Sbjct: 469 LSLLPERKEIELKEKELKALENKLGIYEDNDWINLEQLLASYE-KLRGKVKEEKRLLRIL 527

Query: 600 G-SGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTL-----S 653
                  ++RE      + ++  V+      V   P+       P+   L++ +     S
Sbjct: 528 QRQAEETRIREMSLSLSFAILGTVLSLKGKHV---PTAKKSTAEPIPAVLVAKVPGSGQS 584

Query: 654 KIRLSVPPDLR----------PLDARQSILLAV------QELESRFPQG---------LP 688
              L +  D R           L A    L AV      +E+ SR  Q          L 
Sbjct: 585 SYSLCLGKDNRWYIVGAMDVMTLQADFPRLAAVDYMEVPEEMGSRLGQCRKGDEISLVLA 644

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQL 747
           +  P   + ++ PEV+  + ++   E +  AHPL +       I+ ++R   +  EI+  
Sbjct: 645 QQIPAVPLPVDPPEVLAQMQKLAICEAEAEAHPLKEWGNPRTLIKGWRRVEMLRAEIEDR 704

Query: 748 KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
           + ++ D ++ +   E  +   +L+  G +      ++ G+A   I   +EL +  ++ +G
Sbjct: 705 QRELED-KLARHWQEFLHLIEILQYFGCLHGVEPTEV-GQACAAIRGDNELWLGLVLMSG 762

Query: 808 TFNDLD-HHQVAALASCFIPVDK--SSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           +F++LD HH   A A     + +  S  +  L +E+ + +  L+    ++ ++Q+  ++ 
Sbjct: 763 SFDELDPHHLATACAGLVTEITRPDSWTRYELSVEVKEAMASLRNLRHQLFQVQHRHQVA 822

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           + V  ++E      L+ ++  W+ G  + E++    + EG ++R  RR  +FL+Q+
Sbjct: 823 LPV--WLERD----LIALVEQWALGVEWEELVNNASLDEGDVVRMLRRTLDFLSQI 872


>gi|456738501|gb|EMF63068.1| helicase [Propionibacterium acnes FZ1/2/0]
          Length = 917

 Score =  341 bits (875), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 285/939 (30%), Positives = 450/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F  W+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGGWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|289772656|ref|ZP_06532034.1| helicase [Streptomyces lividans TK24]
 gi|289702855|gb|EFD70284.1| helicase [Streptomyces lividans TK24]
          Length = 944

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 271/955 (28%), Positives = 450/955 (47%), Gaps = 83/955 (8%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YA  +  A+    A   +     + Y F LDPFQ  +   LE  + VLV+A T +GKT V
Sbjct: 20  YAAARQRAVEQATALASFR----EMYDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIV 75

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMT 165
            E+A+ +A +  ++  YT+P+KALSNQKY +L + +    VGL+TGD +++  A  +VMT
Sbjct: 76  GEFAVHLALQQGRKCFYTTPIKALSNQKYADLCRRYGTDKVGLLTGDNSVNSEAPVVVMT 135

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY GS+ L  +  V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SN
Sbjct: 136 TEVLRNMLYAGSQTLLGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSN 195

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVK 282
           A +F +W+  + +    V+ ++ RP PL  +V  + G  +Y + +E E  ++    +  +
Sbjct: 196 AEEFGDWLDTV-RGDTQVIVSEHRPVPLFQHV--LAGRRMYDLFEEAEGHKKAVNPDLTR 252

Query: 283 LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSF 337
           +      +     R  G+A     +       S ++     ++++ +      P I F F
Sbjct: 253 MARLEASRPSYQDRRRGRAMKEADRERERRQRSRVWTPSRPEVIERLDSEGLLPAITFIF 312

Query: 338 SRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SR  CE        + L  N +  ++ V  + +     +  ED ++      L  L+RGI
Sbjct: 313 SRAGCEAAVQQCLYAGLRLNDEGARERVRALVEERTSSIPREDLHVLGYYEWLEGLERGI 372

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
           A HH+G+LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I
Sbjct: 373 AAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADI 432

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             GE+ Q++GRAGRRG D  G  +++    M    L  +   +  PL S+F+ SY   +N
Sbjct: 433 TPGEFTQLTGRAGRRGIDVEGHAVVLWQRAMNPEHLAGLAGTRTYPLRSSFKPSYNMAVN 492

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYH 572
           L+ +  G+  +  +++ SF QFQ +K++  I ++V + EE      AS    +    EY 
Sbjct: 493 LVDQF-GRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLEGYKASMTCHLGDFDEYA 551

Query: 573 KLKLDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
           +L+ ++   E++L  +     R      L  L  G +I V  G         + +V  P 
Sbjct: 552 RLRRELKDREQELARQGANQRRAEAAVALEKLKPGDVIHVPTGKY-----AGLALVLDPG 606

Query: 628 AGVGTLPSRGGGYIVPVQLPLIST-------LSKIRLSVPPDL-------RPLDARQSIL 673
              G      G        PL+ T       L+ I   VP +        +  +AR    
Sbjct: 607 LPAGRSNGHRGFDHHDGPRPLVLTAERQVKRLASIDFPVPVEALDRMRIPKSFNARSP-- 664

Query: 674 LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIR 732
            + ++L S        + P +  K       D   +I  L   + AHP +   D E+  R
Sbjct: 665 QSRRDLASALRSKAGHITPERARKKRSQAADD--REINRLRKAIRAHPCHGCDDREDHAR 722

Query: 733 CFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAAC 790
             +R   +  +  QL+ ++  R + I +  D +     +L +L ++  D V +   R A 
Sbjct: 723 WAERYHRLLRDTSQLERRIEGRTNTIARTFDRIVA---LLTELDYLRGDEVTEHGKRLAR 779

Query: 791 LIDTGDELLVTELMFNGTFNDLDHHQVAALASCF--------------IPVDKSSEQINL 836
           L    D LL +E +  G +  L   ++AA  S                +P  ++   +  
Sbjct: 780 LYGELD-LLASECLREGVWEGLSPAELAACVSALVFESRAADDATAPKVPSGRAKAALGE 838

Query: 837 RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVI 896
            + +   L  L+E  R I++ +   + E ++                Y W+ G    EV+
Sbjct: 839 TVRIWGRLDALEEDFR-ISQTEGVGQREPDLG----------FAWAAYMWASGKGLDEVL 887

Query: 897 QMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSN 951
           +  ++  G  +R  +++ + L Q+ AAA   G    +    A  E LR  + +S+
Sbjct: 888 REVEMPAGDFVRWCKQVIDVLGQISAAAPGAGSTVPKNARKAVDELLRGVVAYSS 942


>gi|257056196|ref|YP_003134028.1| superfamily II RNA helicase [Saccharomonospora viridis DSM 43017]
 gi|256586068|gb|ACU97201.1| superfamily II RNA helicase [Saccharomonospora viridis DSM 43017]
          Length = 918

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 282/924 (30%), Positives = 444/924 (48%), Gaps = 73/924 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A   SFE D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 29  FAAEVSFEFDDFQVRGCEALEDGHGVLVCAPTGAGKTIVGEFAVHLALAEGRKCFYTTPI 88

Query: 129 KALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY  S  L ++ +V
Sbjct: 89  KALSNQKYGDLVERYGSDIVGLLTGDTSINGGAQIVVMTTEVLRNMLYAESTTLDDLGYV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 149 VLDEVHYLADRFRGAVWEEVILHLPDYVRVVGLSATVSNAEEFGEWLVEV-RGDTTVVVD 207

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLK--QKIGGRRENGKASGR 304
           + RP PL  ++  VGG    L V E+    E    KL    L+  ++ G         GR
Sbjct: 208 EHRPVPLWQHML-VGGRLYDLFVGERADTGE---AKLNPRLLRAVEEAGRMHVPAGLRGR 263

Query: 305 MAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQE 358
             +G    G         +IV  +      P IVF FSR  C+        S L  NT +
Sbjct: 264 SRRGAPQRGPRYRPPSRTEIVDRLDRAGLLPAIVFIFSRAGCDAAVTQCVRSGLRLNTPD 323

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E   V ++       L   D  +         L++GIA HH+GLLP  KE VE LF  GL
Sbjct: 324 EVQQVRRIVDERTADLPPSDLEVLGYWEWREGLEQGIAAHHAGLLPAFKETVEELFVRGL 383

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           VK +FATET A+G+NMPA+TVV   + K++G+SH  +  GEY Q++GRAGRRG D  G  
Sbjct: 384 VKVVFATETLALGINMPARTVVLERLVKYNGESHVDLTPGEYTQLTGRAGRRGIDVEGHA 443

Query: 479 IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ SF QFQ
Sbjct: 444 VVVWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAVNLVGRF-GAVKARELLEQSFAQFQ 502

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRP 592
            ++++  + +++   E    +L    +A      E+  Y  L+  I++ EK L  + T  
Sbjct: 503 ADRSVVGLSRRI---ERNTEALRGYADAVTGDFDEMLSYLTLRKKISEREKALARQNTAA 559

Query: 593 ERV-----LYYLGSGRLIKVREGGTDWGWGVV----VNVVKKPSAGVGTLPSRGGGYIVP 643
            R      L  L  G +I V   G   G  VV    V+   +P   V T   R  G +  
Sbjct: 560 RRAQTAKSLEKLRKGDVIAV-PSGRRAGLAVVIDSGVDQFDEPRPLVVT-EDRWAGTLSL 617

Query: 644 VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P  +  L ++RL    +LR    R+ I  +++    R     PK    +     DPE
Sbjct: 618 SDFPTPVEPLGRLRLPKHVELRSPKTRRDIASSLRNTGIR----PPKRQRWRSDAHSDPE 673

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS--QIQKF 759
                  + EL  +L AHP++   D E  +R  +R   +  + Q+LK K+  +   + + 
Sbjct: 674 -------LAELRRQLRAHPVHGMADREANLRWVERYQRLAEDNQRLKRKVAATTHSLARA 726

Query: 760 RDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            D ++   R+L + G++   G  V   G+    + +  +LL  E +    ++ L   ++A
Sbjct: 727 FDRIR---RLLIERGYLGESGDDVTEHGQLLARLYSESDLLAAECIRQRVWHGLAPAELA 783

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP- 877
           A+ S  +   +       ++      +  QE+ R  +++     +E      ++ T  P 
Sbjct: 784 AVVSTLVYEARRDSTAEAKVPAGPVNKAWQETVRLWSDL-----VEDERRHRLDPTREPD 838

Query: 878 --FLMDVIYCWSKGATFAEVIQMTDI-----FEGSIIRSARRLDEFLNQLRAAAQAVG-E 929
             F   V Y W++G +  +V+   ++       G  +R +R++ + L Q+R     +G E
Sbjct: 839 AGFAWPV-YRWARGESLEKVLTSAEVNGQELSAGDFVRWSRQVVDLLEQIR---DVLGKE 894

Query: 930 VNLEKKFAAASESLRRGIMFSNSL 953
             +      AS  LRRG++ +  L
Sbjct: 895 HPVGGAAGKASRLLRRGVVAAGEL 918


>gi|365866685|ref|ZP_09406292.1| putative ATP-dependent RNA helicase [Streptomyces sp. W007]
 gi|364003874|gb|EHM25007.1| putative ATP-dependent RNA helicase [Streptomyces sp. W007]
          Length = 926

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 274/944 (29%), Positives = 449/944 (47%), Gaps = 81/944 (8%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+
Sbjct: 6   GPFREMYEFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTT 65

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + 
Sbjct: 66  PIKALSNQKFADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLSGLG 125

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 126 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVI 184

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKLQDTFLKQKIGGR 295
            ++ RP PL  +V  + G  +Y + +E           RE N   V+L     +     R
Sbjct: 185 VSEHRPVPLWQHV--MAGRKMYDLFEEATDHGGRGAGRREVNPDLVRLARQESQNVYNPR 242

Query: 296 -RENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS- 348
            R  GK      +         I+     +++  +      P I F FSR  CE      
Sbjct: 243 DRRRGKMVREADRERERRQRGRIWTPGRPEVIDRLDNEGLLPAITFIFSRAGCEAAVQQC 302

Query: 349 -MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             + L  N ++++  V ++ +     +  ED ++      L  L+RGIA HH+G+LP  K
Sbjct: 303 LYAGLRLNDEDKRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGMLPTFK 362

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRA
Sbjct: 363 EVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRA 422

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +++    M+   L  +   +  PL S+FR SY   +NL+ +  G+  + 
Sbjct: 423 GRRGIDVEGHAVVLWQRGMDPTALAGLAGTRTYPLRSSFRPSYNMAVNLVQQF-GRHRSR 481

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQL 581
            +++ SF QFQ +K++  I ++V + EE    L+   E       +  EY +L+ D+   
Sbjct: 482 ELLETSFAQFQADKSVVGISRQVQRNEE---GLEGYKEGMTCHLGDFEEYARLRRDLKDR 538

Query: 582 EKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSR 636
           E +L  +            L  L  G +I V  G         + +V  P    G     
Sbjct: 539 ETELAKQGVAQRRAAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAGRANGH 593

Query: 637 GGGYIVPVQLPLISTLSK-----------------IRLSVPPDLRPLDARQSILLAVQEL 679
            G        PL+ T  +                  R+ VP    P   +       ++L
Sbjct: 594 RGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPRSPQSR-----RDL 648

Query: 680 ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKA 738
            S        + P +  K   P   D   +I  L  +L AHP +   + E+  R  +R  
Sbjct: 649 ASALRTKAGHIVPDRHRKGRAPAADD--REISRLRTELRAHPCHGCDEREDHARWAERYH 706

Query: 739 EVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            +  + +QL+ ++  R + I +  D +     +L +L ++  + V     R A L    D
Sbjct: 707 RLQRDTRQLEKRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTANGRRLARLYGELD 763

Query: 797 ELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIA 855
            LL +E +  G +  L+  ++AA  S  +    ++ + +  ++        + E  R   
Sbjct: 764 -LLASECLREGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVAMGEMVRIWG 822

Query: 856 EIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            +   E   ++N  E V     P L     +Y W+ G T  EV++  ++  G  +R  ++
Sbjct: 823 RLDALEEDFKINQTEGV-GQREPDLGFAWAVYMWASGQTLDEVLREAEMPAGDFVRWCKQ 881

Query: 913 LDEFLNQLRAAA---QAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + + L Q+ AAA      G  ++ K    A +++ RG++  +S+
Sbjct: 882 VIDVLGQVAAAAPRDAGEGASSVAKNARKAVDAVLRGVVAYSSV 925


>gi|428318931|ref|YP_007116813.1| DSH domain protein [Oscillatoria nigro-viridis PCC 7112]
 gi|428242611|gb|AFZ08397.1| DSH domain protein [Oscillatoria nigro-viridis PCC 7112]
          Length = 912

 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 281/921 (30%), Positives = 445/921 (48%), Gaps = 119/921 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQR ++A L+  +SV+V A T +GKT + EYAI  A    +RV YT+P
Sbjct: 12  DLKTIFPFELDNFQREAIAALDAGKSVVVCAPTGSGKTLIGEYAIHQALSRGRRVFYTTP 71

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+   +F D  VGL+TGD++++ +A  LVMTTEI R MLY G+ +      
Sbjct: 72  LKALSNQKLRDFRSQFGDDNVGLLTGDISVNRDAPILVMTTEIFRNMLY-GTPIGEVGTS 130

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L  V  V+ DE HYM DR+RG VWEESII+    I+++ LSAT++N+ Q  +WI  +H  
Sbjct: 131 LTGVETVVLDECHYMNDRQRGTVWEESIIYCSSEIQLLALSATVANSEQLTDWINKVHG- 189

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN- 298
           P  +VY+DFRP PLQ +       G++ ++DE                      G+R N 
Sbjct: 190 PTELVYSDFRPVPLQFHF--ANQKGIFPLLDET---------------------GKRANV 226

Query: 299 ----GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
                K   ++ +G   +    +  ++  + +R   P I F FSRR C+Q    +     
Sbjct: 227 RLVPKKKQQKVERGSIPT--PSLTDVLARLDDRDMLPAIYFIFSRRGCDQAVAEVGNFSL 284

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
             + E   ++++  + +   N E       E +L    +GIA HH+G+LP  K LVE LF
Sbjct: 285 VNEAETAELKRIIDDFLQ-RNPEAERFGQKEALL----KGIAAHHAGILPAWKGLVEELF 339

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
             GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D 
Sbjct: 340 GRGLIKVVFATETLAAGINMPARTTVISTLSKRTDKGHRLLNASEFLQMAGRAGRRGMDK 399

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  + +            +   K  PL S F  SY  +LNL+ +      A+ +++ SF
Sbjct: 400 LGHVVAVQTRFEGAKEASYLATAKADPLASQFTPSYGMVLNLL-QTHTLDEAQELVERSF 458

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASLD---ASG------EAEVAEYHKLKLDIAQLEKKL 585
            Q+     L     ++ +L+ E A L+   A G      E E+A Y KL+  + + ++ L
Sbjct: 459 GQYLSTLYLQPQQAELDRLQTELAVLEESLAGGGNVSTLEKELAHYEKLQARLKEEKRLL 518

Query: 586 MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKK------PSAGVGTLPSRGGG 639
            + + + E   +   S  +     G      G  V   K+      P+  V   P  G  
Sbjct: 519 KTLLQQAEEARFKEMSVAVAFAVLGTVLSLKGKHVPTAKRSHTTPVPAVLVAKTPGSGQA 578

Query: 640 ------------YIVPV--------QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
                       Y+V +        +LP +S      L+ PP++ PL   Q   L  +E 
Sbjct: 579 PNLVCLGKDNRWYVVAISDVATLHAELPRLSVADT--LNPPPEM-PLRLGQC-RLGTEET 634

Query: 680 ES---RFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP-LNKSQDENQIRCFQ 735
            S     PQ LP   P        PE ++  ++I  LE KL  HP L        ++  +
Sbjct: 635 ASIAGSIPQ-LPTPEP-------SPEAIEQQHKIAALEAKLEIHPVLEWGNPGTLLKRQR 686

Query: 736 RKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID----ADG---------VV 782
           R+ E+  EI++ + ++ + Q  ++ ++  N   +L   G ++    A G         V 
Sbjct: 687 RREELKKEIRKSEQEL-EKQRARYWEQFLNLIDILLNFGCLERVVSAHGNRDDSSDRLVP 745

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLD-HHQVAALASCFIPVDK--SSEQINLRME 839
            + G+A   I   +EL +   + +  F++LD HH  AA A+    V +  S    +L  E
Sbjct: 746 TILGQACAAIRGDNELWLGLSLMSAEFDELDPHHLAAACAALVTEVSRPDSWTHYSLSPE 805

Query: 840 LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMT 899
           +  PL  LQ+  R+    Q + + E  +  ++E      L+ ++  W+ G  + E+I  T
Sbjct: 806 VLAPLDNLQKGLRRRL-FQVQYRHEAAIPIWLERE----LVTLVEQWALGVEWLELISHT 860

Query: 900 DIFEGSIIRSARRLDEFLNQL 920
            + EG ++R  RR  +FL+Q+
Sbjct: 861 SLDEGDVVRILRRTLDFLSQI 881


>gi|428312000|ref|YP_007122977.1| superfamily II RNA helicase [Microcoleus sp. PCC 7113]
 gi|428253612|gb|AFZ19571.1| superfamily II RNA helicase [Microcoleus sp. PCC 7113]
          Length = 901

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 276/908 (30%), Positives = 442/908 (48%), Gaps = 99/908 (10%)

Query: 66  NGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYT 125
           N ++   + FELD FQ+ ++A L    SV+V A T +GKT + EY I  A     R+ YT
Sbjct: 9   NLDLKTLFPFELDDFQQQAIAALNAGRSVVVCAPTGSGKTLIGEYTIHRALARGGRIFYT 68

Query: 126 SPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV---- 179
           +PLKALSNQK R+  + F  + VGL+TGD++++ +A  LVMTTEI R MLY G+ +    
Sbjct: 69  TPLKALSNQKLRDFRELFGAQQVGLLTGDISINRDAPILVMTTEIFRNMLY-GTPIGEVG 127

Query: 180 --LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH 237
             L  V  V+ DE HYM DR+RG VWEESII+ PP +++V LSAT++NA Q  EW+  +H
Sbjct: 128 TSLTGVEAVVLDECHYMNDRQRGTVWEESIIYCPPEVQLVALSATVANADQLTEWLNLVH 187

Query: 238 KQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRE 297
                ++Y+DFRP PLQ Y       G++ ++DE  Q R    +K ++   KQ+ GGR E
Sbjct: 188 GA-TELIYSDFRPVPLQFYFG--NTKGVFPLLDET-QTRISPRLKPKNKGGKQR-GGRPE 242

Query: 298 NGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQ 357
           +                  +  I++ +  R   P I F FSRR C++    M   DF+  
Sbjct: 243 S----------------PHMTYILEQLAARDMLPAIYFIFSRRGCDRAVEEMG--DFSLV 284

Query: 358 EEKDTVEQVFQNAVD---CLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
            E++T +   +  +D     N E      +E     L RGIA HH+G+LP  K LVE LF
Sbjct: 285 NEQETAQ--LKEKIDEFLSRNPEAGRAGQVEP----LYRGIAAHHAGILPAWKGLVEELF 338

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
           Q GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D 
Sbjct: 339 QMGLIKVVFATETLAAGINMPARTTVISTLSKRTDRGHRLLTASEFLQMAGRAGRRGMDA 398

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  + +            +      PLVS F  +Y  +LNL+ +      A+ +++ SF
Sbjct: 399 IGYVVTLQTPFEGAKEAAYLATAGADPLVSQFSPTYGMVLNLL-QTHSVSEAKDLVERSF 457

Query: 535 HQF-------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHK-----------LKL 576
            Q+         ++A+ ++  +++KL+ + A ++     ++  Y K           LKL
Sbjct: 458 AQYLATLYLRPQQQAITELTTELTKLDIQLAPIEVK---QLERYEKLSERLKEERRLLKL 514

Query: 577 DIAQLEKKLMSEITR-----PERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG 631
              Q E     EI +     P   + YL  G+ +KV           V  V+     G G
Sbjct: 515 LENQAEAVRAQEIAQVLKDAPPGTILYL-KGKHVKVSSP--------VPAVLVTKEKGSG 565

Query: 632 TLP-----SRGGGYIVPVQLPLISTLSKIRLS------VPPD--LRPLDARQSILLAVQE 678
             P     S    + V     ++   ++  +       VP +  L+P   R+      + 
Sbjct: 566 HSPNFVCLSTQNRWYVATTADVVDMFAEDEMGYVEYVPVPKELMLKPGQVRRGT-EETEA 624

Query: 679 LESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE-NQIRCFQRK 737
           +     + +    P  D+    PEV      +E ++ +L  HPL+   +  N I+  +R+
Sbjct: 625 IAEHLQRSIGHQAPSADIASFAPEVFTQAKVVEAVKDQLDNHPLHYWGNPGNLIKRHKRR 684

Query: 738 AEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDE 797
             +  EI Q +++ R++Q   ++ E  N   VL+  G +D      L G+A   I   +E
Sbjct: 685 LALQEEIHQHQAQYRENQAHHWQ-EFLNLIEVLRAFGCLDNVTPTPL-GKATAAIRGDNE 742

Query: 798 LLVTELMFNGTFNDLD-HHQVAALASCFIPVDKSSEQIN-LRMELA-KPLQQLQESARKI 854
           L +   + +G F+ LD HH   A+ +      +     N L  E A + L  L+ + + +
Sbjct: 743 LWLGLALMSGEFDHLDPHHLAGAMCALVTETPRPDSWTNYLPPEPAIEALVHLKGTRQSL 802

Query: 855 AEIQNECKLEVNV-DEY-VESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            ++Q    +   +  EY     +   LM ++  W+ G ++ ++   T + EG ++R  RR
Sbjct: 803 LKLQYRYDISWPIWPEYKFLDKIVGGLMGLVEQWALGISWTDLCANTSLDEGDVVRILRR 862

Query: 913 LDEFLNQL 920
             + L+Q+
Sbjct: 863 TVDILSQI 870


>gi|269956566|ref|YP_003326355.1| DEAD/DEAH box helicase domain-containing protein [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305247|gb|ACZ30797.1| DEAD/DEAH box helicase domain protein [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 981

 Score =  340 bits (873), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 287/993 (28%), Positives = 458/993 (46%), Gaps = 117/993 (11%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YA ++         +     E      FELD FQ  +   LE    VLV+A T AGKT V
Sbjct: 19  YAASRARTARSQVGSGTRLAEFRSELGFELDDFQVAACQALEDGRGVLVAAPTGAGKTVV 78

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYREL--HQEFKDVGLMTGDVTLSPNASCLVMT 165
            E+A+ +A     +  YT+P+KALSNQKY +L      ++VGL+TGD T++  A  +VMT
Sbjct: 79  GEFAVHLALAQGGKAFYTTPIKALSNQKYADLVRRHGVENVGLLTGDTTINGEAPVVVMT 138

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY GS  L+ +A+V+ DE+HY+ DR RG VWEE II L   +++V LSAT+SN
Sbjct: 139 TEVLRNMLYAGSRTLEGLAFVVMDEVHYLADRFRGPVWEEVIIHLADHVQLVSLSATVSN 198

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPL-QHYVF----PVGGSGLYLV----VDEKEQFR 276
           A +F +W+  + +    VV ++ RP PL QH V     P G   LY +    VD  +   
Sbjct: 199 AEEFGDWL-EMVRGDTAVVVSERRPVPLWQHVVVSAREPRGTPRLYDLYAGHVDPTDPGV 257

Query: 277 EDNF-VKLQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDI------------------ 317
                 +L D F   +  GRR +    GR   G  GSG                      
Sbjct: 258 NPPINPELHDVF---RTSGRRADD--DGRSGNGRRGSGQRGPGDRGYRGRGGYRPGVAGL 312

Query: 318 ---------FKIVKMIMERKFQPVIVFSFSRRECE---QHAMSMSKLDFNTQEEKDTVEQ 365
                    F +V  +      P I F FSR  CE   Q  ++ + L   + +E+  + +
Sbjct: 313 APQRRTPPRFAVVDALDADALLPAIYFIFSRAGCEGAVQQCLT-AGLRLTSPQEEAEIRR 371

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
           + +     +  ED ++      L  L RGIA HH+GLLPV KE VE LF  GLVK +FAT
Sbjct: 372 LVEQRTATIPPEDLDVLGYWSWLQALARGIAAHHAGLLPVFKETVEDLFARGLVKVVFAT 431

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A+G+NMPA++VV   + KWDG +H+ +  GEY Q++GRAGRRG D  G  +++    
Sbjct: 432 ETLALGINMPARSVVLEKLVKWDGTAHQPVTPGEYTQLTGRAGRRGIDVEGHAVVVDHTG 491

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           ++   L  +   +  PL S+FR +Y   +NL+S+  G   A  V++ SF QFQ ++ +  
Sbjct: 492 LDPVALAGLASRRTYPLRSSFRPTYNMAVNLVSQV-GHDRAREVLETSFAQFQADRGVVG 550

Query: 546 IGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKL---MSEITRPERVL 596
           + K+    +  A +LD   +A      + A+Y  ++  I+  EK+L    S   R E V 
Sbjct: 551 LAKQA---QAHAEALDGYAQAMACDRGDFAQYMAIRRQISDREKELSRAASGARRAEAVA 607

Query: 597 YY--LGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLS- 653
            +  L  G +++V   G   G+ +V++      +  G  P+      V  Q   +  L+ 
Sbjct: 608 SFENLKRGDVVEV-PSGRRRGFVLVLDPGHDDRSFDGPRPT------VLTQEKQVKKLTL 660

Query: 654 ---------KIRLSVPPDLRPL--DARQSILLAVQELESRF-----PQGLPKLNPVKDMK 697
                      R+ +P    P   DAR+ +   ++     F      +      P +   
Sbjct: 661 ADAPGGVTVVTRVKIPKAFNPRRPDARRDLASTMRNALGAFRDDAGTRSHGAARPGRGPG 720

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDS 754
                  D   ++  L  +L AHP +   D ++  R  +R  ++  E ++L  ++  R  
Sbjct: 721 RRSDAASD--KELASLRSRLRAHPCHSCPDRDDHARWAERHDQLAGEHRRLVQRIEGRTG 778

Query: 755 QIQKFRDELKNRSRVLKKL-----GHIDADGVVQLKGRAACL--IDTGDELLVTELMFNG 807
            + +  D+       L+ L        D  G +Q+    A L  +   ++LL+ E +  G
Sbjct: 779 SVARIFDKTCTVLETLRYLDRSDDAGSDGRGELQVTADGAWLRRVYAENDLLLAECLRRG 838

Query: 808 TFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
           T++ LD   +AA  S  +   +       R + A+P        R    +    ++   V
Sbjct: 839 TWDGLDAPGLAAAVSTVVYSGR-------REDAAEPYVPGGPHGRLAQALDATVRVWSEV 891

Query: 868 DEYVE----STVRPFLMDV---IYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            +  E        P  + +   ++ W+ G     V++ TD+  G  +R  +++ + L+QL
Sbjct: 892 TDLEELHGLDATGPLDLGIVAPVHRWAGGKGLDAVLRGTDLAAGDFVRWCKQVVDVLDQL 951

Query: 921 RAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
              AQA     L      A  ++ RG++  +S+
Sbjct: 952 ---AQAAPTPALRATARKAQHAVLRGVVAYSSV 981


>gi|373252718|ref|ZP_09540836.1| superfamily II RNA helicase [Nesterenkonia sp. F]
          Length = 990

 Score =  340 bits (872), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 292/969 (30%), Positives = 467/969 (48%), Gaps = 111/969 (11%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G       F+LD FQ  +   LE  E+VLV+A T AGKT V E+A+ +      +  YT+
Sbjct: 23  GAFRAEQGFDLDEFQAEACRHLEDGEAVLVAAPTGAGKTVVGEFAVHLGLARGTKTFYTT 82

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQKY+EL ++   + VGL+TGD +++ +A  +VMTTE+LR MLY  +E L+++ 
Sbjct: 83  PIKALSNQKYQELAEQHGPERVGLLTGDTSVNADAQIVVMTTEVLRNMLYTDAEPLRDLG 142

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++++V LSAT+SNA +F  W+  +  +   VV
Sbjct: 143 YVVMDEVHYLADRFRGAVWEEVIIHLPESVQVVALSATVSNAEEFGAWLDTVRGETA-VV 201

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVK-------LQDTFLKQKIGGRRE 297
            ++ RP PL  +++  G      V D      ED+ V        LQ    +Q+    R 
Sbjct: 202 VSEHRPVPLWQHMYVDGQIHDLFVTDGD----EDDAVSAALVNPDLQRLAHQQQSPASRR 257

Query: 298 NGKASGRMAKGGSGSGGS----------------------DIFKIVKMIMERKFQPVIVF 335
            G  +     G     GS                      +  ++++ +      P I F
Sbjct: 258 GGPHAKGGKGGRGRGAGSRPRGAGGSVSGVSGSPVGGSRLNRPRLIRALDRDGLLPCITF 317

Query: 336 SFSRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKR 393
            FSR  CE          +   T  E + +    +     L  ED  +   +     L  
Sbjct: 318 IFSRAGCEAAVEQCLTGGIRLTTPAEAEEITSRVERMGWELPAEDLAVLGFDSFREALVH 377

Query: 394 GIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHR 453
           G+A HH+G+LP  KELVE LF EGL+K +FATET A+G+NMPA+TVV   + K++G+ H 
Sbjct: 378 GVAAHHAGMLPPFKELVEDLFAEGLLKVVFATETLALGINMPARTVVLEKLDKFNGEQHV 437

Query: 454 YIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSI 513
            I  GE+ Q++GRAGRRG D  G  +++    M+   +  +   +  PL S+FR SY   
Sbjct: 438 DITPGEFTQLTGRAGRRGIDVEGHAVVVHQPGMDPRQVGGLASKRTYPLNSSFRPSYNMA 497

Query: 514 LNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEA------E 567
           +NL ++  G+  A  ++++SF QFQ ++++  + + VS+ E   +SL    EA      +
Sbjct: 498 VNLTAQF-GRERARTILESSFAQFQADRSVVGLARDVSQRE---SSLQGYHEAMQCHLGD 553

Query: 568 VAEYHKLKLDIAQLEK---KLMSEITRPE--RVLYYLGSGRLIKVREGGTDWGWGVVVNV 622
            AEY +L+  I++LEK   K  +   R E  RVL  L  G +I+V EG    G  +VV+ 
Sbjct: 554 FAEYAQLRRRISELEKGQAKARNRQRRRELTRVLAGLRPGDVIEV-EGRRGLGTCLVVHS 612

Query: 623 VKKPSAGVGTLPSRGGGYIVPV----QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQ- 677
             +     G +  RG    V V    Q P +  LS IRL   P ++    R+ +  +++ 
Sbjct: 613 APEHDPRPGVITERGQLRKVHVEDFPQPPEV--LSSIRLPRKPQVKVPKVRRDLASSMRA 670

Query: 678 ELESRFPQGLPKLN-PVKDMKIED-PEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCF 734
            L+ R P   P+ + P       D P+      +I +L+ ++  HP +   D E+  R  
Sbjct: 671 ALQDRTP---PRDDAPAPGFGFADQPD----EEEISDLQAQMRRHPCHGCSDREDHARWA 723

Query: 735 QRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHID-------------AD 779
           +R   +  E  QL+ K+  R   + K  D +     VL  LGH+              AD
Sbjct: 724 ERWWTLRRETDQLRQKIERRTGSLAKTFDRICG---VLSDLGHLQLVDPEHGGPLEEAAD 780

Query: 780 G------------VVQLKGRAACLIDTGDELLVTELM-FNGTFNDLDHHQVAALASCFIP 826
           G             V  +G+    I  G+  L TEL+   G    LD  ++AA ++  I 
Sbjct: 781 GSDGQRRWDRAELTVTERGQRLRRI-YGERDLFTELLQHRGVLRGLDAAELAAFSTVLIY 839

Query: 827 VDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRP--FLMDVIY 884
             K  ++  + M    P  +L E+ R   ++  + +  +    +V+ T  P   L   ++
Sbjct: 840 QAKRDDEGAMPM---MPTVRLGEAVRAAVDVHADLEA-LEKQHHVDPTPAPEMGLAPPMH 895

Query: 885 CWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLR 944
            W+ G +  E +  + +  G  +R A++  + L+QL  A        L  +   A E + 
Sbjct: 896 AWASGRSLREALMDSPLAAGDFVRWAKQSIDVLDQLGRAPHTA--AKLAARCQEAVELIG 953

Query: 945 RGIMFSNSL 953
           RG++  +++
Sbjct: 954 RGVVAYSAV 962


>gi|429200671|ref|ZP_19192347.1| DEAD/DEAH box helicase [Streptomyces ipomoeae 91-03]
 gi|428663653|gb|EKX63000.1| DEAD/DEAH box helicase [Streptomyces ipomoeae 91-03]
          Length = 949

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 272/929 (29%), Positives = 443/929 (47%), Gaps = 75/929 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 47  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALKQGKKCFYTTPIKALS 106

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  +  V+ DE
Sbjct: 107 NQKYADLCRRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLIGLGHVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  ++      +     R  G+A     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEGEGHKKAVNPDLTRMARMEASRPSFQDRRRGRAMREADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S I+     ++++ +      P I F FSR  CE        + L  N  E +
Sbjct: 284 ERERRQRSRIWIPSRPEVIERLDSEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDEAR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 LKVRALVEERTATIPAEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M  + L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGMNPDHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE       S    +    EY +L+ ++   E +L  +     R   
Sbjct: 523 KSVVGISRQVQRNEEGLEGYKESMTCHLGDFEEYARLRRELKDRETELAKQGAAQRRAEA 582

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTL 652
              L  L  G +I V  G         + +V  P    G      G        PL+ T 
Sbjct: 583 AVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGLEYHDGPRPLVLTA 637

Query: 653 SK--IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNP---------VKDMKIEDP 701
            +   RL+      P++A + + +  +    R PQ    L           V D   +  
Sbjct: 638 ERQVKRLASMDFPVPVEALERMRIP-KSFNPRSPQSRRDLASALRTKAGHLVPDRHRKRR 696

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQK 758
                  +I  L  +L AHP +   D E+  R  +R   +  +  QL+ ++  R + I +
Sbjct: 697 AAAADDREIARLRAELRAHPCHGCNDREDHARWAERYHRLKRDTAQLERRIEGRTNTIAR 756

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
             D +     +L +L ++  D V +   R A L    D LL +E +  G +  LD  ++A
Sbjct: 757 TFDRIVA---LLTELDYLRGDEVTEHGKRLARLYGELD-LLASECLRAGVWEGLDPAELA 812

Query: 819 ALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLE 864
           A  S  +              P  K+   +   + +   L  L+E  R I + +   + E
Sbjct: 813 ACVSALVYEARVGDDAMAPKLPSGKAKAALGEMVRIWGRLDGLEEEFR-ITQSEGVGQRE 871

Query: 865 VNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
            ++                Y W+ G    EV++  ++  G  +R  +++ + L Q+ AAA
Sbjct: 872 PDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQVSAAA 921

Query: 925 QAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            +   V   K    A + L RG++  +S+
Sbjct: 922 PSGSTVA--KSARKAVDGLLRGVVAYSSV 948


>gi|284991142|ref|YP_003409696.1| DEAD/DEAH box helicase domain-containing protein [Geodermatophilus
           obscurus DSM 43160]
 gi|284064387|gb|ADB75325.1| DEAD/DEAH box helicase domain protein [Geodermatophilus obscurus
           DSM 43160]
          Length = 951

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 251/817 (30%), Positives = 399/817 (48%), Gaps = 85/817 (10%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
            F LDPFQ  +   L+    VLV A T AGKT V E+A+  A  + ++  YT+P+KALSN
Sbjct: 28  GFSLDPFQVQACEALDEGSGVLVCAPTGAGKTVVGEFAVHKALAEGRKAFYTTPIKALSN 87

Query: 134 QKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QKY +L + + +  VGL+TGD  ++ +A  +VMTTE+LR MLY  S  +  + +V+ DE+
Sbjct: 88  QKYNDLAERYGEGKVGLLTGDNAINGDAPVVVMTTEVLRNMLYAESPAIDGLGYVVMDEV 147

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE II LP ++ +V LSAT+SNA +FA+W+  +      VV ++ RP 
Sbjct: 148 HYLADRFRGAVWEEVIIHLPQSVTLVSLSATVSNAEEFADWLVTVRGH-TEVVVSEVRPI 206

Query: 252 PLQHYVFPVGGSGLYLVV------------DEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
           PL  ++  VG     L              D + Q   +    + D  L + +   RE+ 
Sbjct: 207 PLWQHML-VGNRVFDLFSLRPAAHAAEQGDDPRGQSTRERGASVVDPELVRYV---REHE 262

Query: 300 KASGRMAKGGSGSGGS----DIFK----------IVKMIMERKFQPVIVFSFSRRECEQH 345
           +   RM   G G+GGS    D  K          +++ +      P I F FSR  C+  
Sbjct: 263 R---RMDTWGGGNGGSRRERDWHKPRYKPPARADVIERLDRSGLLPAITFVFSRNGCDAA 319

Query: 346 AMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLL 403
                 + L    + E+  +  +       L EED ++         L  G+A HH+GL+
Sbjct: 320 VDQCLRAGLRLTDEHERSEIAAIIDERTGSLPEEDLHVLGFWEWREGLLAGLAAHHAGLV 379

Query: 404 PVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQM 463
           P  KE VE  F  GLVKA+FATET A+G+NMPA+TVV   + KW+G++H  +  GEY Q+
Sbjct: 380 PAFKETVEECFVRGLVKAVFATETLALGINMPARTVVLERLVKWNGEAHVDVTPGEYTQL 439

Query: 464 SGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQ 523
           +GRAGRRG D  G  +++    M+ + +  +   +  PL S+FR SY   +NL+S + G+
Sbjct: 440 TGRAGRRGIDVEGHAVVVWAPGMDPSVVAGLASTRTYPLKSSFRPSYNMAVNLVS-SFGR 498

Query: 524 FTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAE---VAEYHKLKLDIAQ 580
             A  ++ +SF QFQ ++++  + +  ++ E +A    A   +E   VA Y +L+ DIA+
Sbjct: 499 ANARELLASSFAQFQADRSVVGLARAAARHERDAERWAAEMHSEGGDVAGYARLRQDIAE 558

Query: 581 LEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVV----VNVVKKPSAGVG 631
            EK+L  +     R+     L  L  G +I+V  G    G  VV    V  + +P   V 
Sbjct: 559 REKELSRDSAAKRRIEASDALAALRPGDVIRVPSGRRQ-GLAVVLDPGVTDLTEPRPLVL 617

Query: 632 TLPSRGGGYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL 690
           T   +  G +  V  P  ++ L+++R+    + R   AR+ +   ++        G  ++
Sbjct: 618 T-EDKWAGRLGAVDFPTPVTALARVRVPRNFNHRSPHARRDLAATLRNARVENDLGARRV 676

Query: 691 NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKS 749
              +    +DP        + +L   L AHP++   D E ++R  +R      E +    
Sbjct: 677 RQ-RSAAADDP-------VLHDLRRALRAHPVHALPDREERVRAAERWLRATREAEATHR 728

Query: 750 KMRDSQIQKFRDELKNRSRVLKKLGHI---------------------DADGVVQLKGRA 788
           +M + +      +      VL++LG++                     D   VV   GR 
Sbjct: 729 RMAE-RTGSLTRQFDRTCDVLEELGYLVPDPAAPPVTAGEDPVDHEVADVAPVVTDDGRR 787

Query: 789 ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
              I +  +LLV E + +G +  L   ++AA  S  +
Sbjct: 788 LARIWSEADLLVAECLRSGVWRGLTPAELAAAVSTLV 824


>gi|271967138|ref|YP_003341334.1| nuclear exosomal RNA helicase MTR4 [Streptosporangium roseum DSM
           43021]
 gi|270510313|gb|ACZ88591.1| putative nuclear exosomal RNA helicase MTR4 ; K01529
           [Streptosporangium roseum DSM 43021]
          Length = 909

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 275/911 (30%), Positives = 458/911 (50%), Gaps = 85/911 (9%)

Query: 86  AC--LERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF 143
           AC  LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALSNQKY +L + +
Sbjct: 40  ACRALEAGDGVLVAAPTGSGKTVVGEFAVHLALEQGRKCFYTTPIKALSNQKYNDLVRRY 99

Query: 144 --KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGV 201
               VGL+TGD +++ +A  ++MTTE+LR MLY GS  L  + +V+ DE+HY+ DR RG 
Sbjct: 100 GAAGVGLLTGDNSINGDAPIVIMTTEVLRNMLYAGSGTLAGLGFVVMDEVHYLADRFRGA 159

Query: 202 VWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVG 261
           VWEE II LP ++++V LSAT+SNA +F EW+  + +    V+  + RP PL  ++  + 
Sbjct: 160 VWEEVIIHLPESVRLVALSATVSNAEEFGEWMGEV-RGDTSVIVDEHRPVPLWQHM--LA 216

Query: 262 GSGLY--LVVDEKEQFREDN--FVKLQDTFLKQKIG-GRRENGKASGRMAKGGSGSGGSD 316
           G+ LY   V DE  +  + N   +++     +Q  G GRR  G +  R A         D
Sbjct: 217 GNRLYDLFVADEDGRRPQVNPHLMRIAKDEERQSYGRGRR--GYSRPRRA------APPD 268

Query: 317 IFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCL 374
               ++ +      P I F FSR  C+   +    + +   T  E+  + Q+       L
Sbjct: 269 RASAIERLDADGLLPAITFIFSRAGCDAAVIQCLHAGIRLTTDAERHQIRQIVDERTAHL 328

Query: 375 NEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNM 434
            +ED  +         L+RG+A HH+G+LP  KE+VE LF   LVKA+FATET A+G+NM
Sbjct: 329 PDEDLAVLGYLEWRDGLERGLAAHHAGMLPAFKEVVEELFTRNLVKAVFATETLALGINM 388

Query: 435 PAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDM 494
           PA++VV   + KW+G++H  +  GEY Q++GRAGRRG D  G  ++     M+   +  +
Sbjct: 389 PARSVVIEKLDKWNGETHADLTPGEYTQLTGRAGRRGIDVEGHAVVQWQPGMDPLQVAGL 448

Query: 495 VLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLE 554
              +  PL S+FR SY   +NL+ +  G+  A  ++++SF QFQ ++A+  I K+V + E
Sbjct: 449 ASTRTYPLRSSFRPSYNMAVNLVGQV-GRERARTLLESSFAQFQADRAVVGIAKQVRRAE 507

Query: 555 EEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRPERV-----LYYLGSGR 603
           E   +L+   EA      +  EY  ++  ++  E +L  +     R      L  L  G 
Sbjct: 508 E---ALEGYREAMTCHLGDFEEYAAMRRALSDREAELSRQRGAARRAQALRSLEALKPGD 564

Query: 604 LIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLISTLSK-IRLSVPPD 662
           +I+V  GG   G  VV++    P      L SRG G       PL+ T+ K ++   P D
Sbjct: 565 IIRV-PGGRRAGLAVVLD----PG-----LNSRGEG-----PAPLVLTIGKQVKKLSPAD 609

Query: 663 LR-PLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLV---------NQIEE 712
              P++  + + +  +   +R P+    L      KI D +              ++I  
Sbjct: 610 FPVPVEPVEHLRIP-KNFNARSPKERANLVASVHAKIGDRDFGKPARARDHAAEDDEINR 668

Query: 713 LEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRV 769
           L   +  HP +   + E+  R  +R  ++  E + L+ ++  R   I +  D++     V
Sbjct: 669 LRKAIRQHPCHGCDEREDHARWAERYYKLLRETEGLRRRVEGRSHVIARTFDKVCG---V 725

Query: 770 LKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDK 829
           L +LG+++ + V   +GR    + T  +LL  E +  G + +LD  ++AA+ S  +    
Sbjct: 726 LDQLGYLEGESVTA-EGRRLAQLYTELDLLTAECLRAGLWEELDPAELAAVVSSLV---F 781

Query: 830 SSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYC---W 886
            S Q +   +   P   +Q++   +  +  E  LE    ++  S +R       +    W
Sbjct: 782 ESRQADDARQPRIPAGGVQKALGDMVRLWGE--LESIEGDHGLSFIREPDFGFAWAAFRW 839

Query: 887 SKG----ATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASES 942
           +KG    A   + +   ++  G  +R  ++L + L Q+  AA    +V  ++    A ++
Sbjct: 840 AKGQNLDAVLRDGVNGAELAAGDFVRWIKQLLDLLGQISDAAPKSSKV--KQNTGKAMDA 897

Query: 943 LRRGIMFSNSL 953
           LRRG++  +SL
Sbjct: 898 LRRGVVAYSSL 908


>gi|418463453|ref|ZP_13034462.1| superfamily II RNA helicase [Saccharomonospora azurea SZMC 14600]
 gi|359733208|gb|EHK82209.1| superfamily II RNA helicase [Saccharomonospora azurea SZMC 14600]
          Length = 918

 Score =  340 bits (871), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 273/921 (29%), Positives = 447/921 (48%), Gaps = 67/921 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A    F  D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 29  FAADVGFTFDDFQVRGCEALEDGHGVLVCAPTGAGKTIVGEFAVHLALAEGRKCFYTTPI 88

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY  S  L ++ +V
Sbjct: 89  KALSNQKYGDLVERYGPDTVGLLTGDTSINGGAQIVVMTTEVLRNMLYAESSALDDLGYV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 149 VMDEVHYLADRFRGAVWEEVILHLPSYVRVVGLSATVSNAEEFGEWLVEV-RGDTTVVVD 207

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           + RP PL  ++  VGG    L   E     E    KL    L++     R +  A+ R  
Sbjct: 208 EHRPVPLWQHML-VGGRLFDLFAGEAVDSGE---AKLNPHLLRRVEDTARMHAPAAFRGR 263

Query: 307 KGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQE 358
               G      ++      IV+ +      P IVF FSR  C+        S L  NT E
Sbjct: 264 GRRGGPFRGPRYRPPARPEIVERLDSAGLLPAIVFIFSRAGCDAAVTQCVRSGLRLNTPE 323

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E + V ++       L + D  +         L++G+A HH+GLLP  KE VE LF  GL
Sbjct: 324 EVEQVRRIVDERTADLPQNDLAVLGYWEWREALEQGVAAHHAGLLPAFKETVEELFVRGL 383

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           VK +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G  
Sbjct: 384 VKVVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHA 443

Query: 479 IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ SF QFQ
Sbjct: 444 VVVWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAVNLVGRF-GSDKARELLEQSFAQFQ 502

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEIT-- 590
            ++++  + +++ + EE   +L    +A      E+  Y  L+  ++  EK L  + T  
Sbjct: 503 ADRSVVGLSRRIDRNEE---ALRGYADAVTGDLDELRSYLALRKRVSDREKILARQNTSN 559

Query: 591 ---RPERVLYYLGSGRLIKVREGGTDWGWGVV----VNVVKKPSAGVGTLPSRGGGYIVP 643
              +  R L  L  G +I V +G    G  VV    V+   +P   V T   R  G +  
Sbjct: 560 RRAQTARSLEQLRKGDVIAVPQGRRA-GLAVVIDPGVDQFDEPRPVVVT-EDRWSGALSL 617

Query: 644 VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P  +  L +++L    +LR    R+ +  +++ L  R         P +  K     
Sbjct: 618 SDFPAPVEPLGRLKLPKHVELRSPKTRRDVASSLRNLNIR---------PPRRQKWRSDA 668

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS--QIQKF 759
             D   ++ EL  +L +HP++   D E  +R  +R   +  E +QLK K+  +   + + 
Sbjct: 669 HSD--AELSELRRELRSHPVHGMADREANLRWVERYQRLEAETEQLKRKVAATTHSLARA 726

Query: 760 RDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            D ++   R+L + G++DADG  V   G+    + +  +LL  E +    ++ L   ++A
Sbjct: 727 FDRIR---RLLSERGYLDADGDAVTEHGQLLARLYSESDLLAAECIRQRLWHRLAPAELA 783

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           A+ S  +   +       ++      +  QE+ R   ++ ++ +    +D   E      
Sbjct: 784 AVVSTLVYEARRDSAAEAKLPSGPVSEAWQETVRVWTDLVDDERRH-RLDRTREPDA--G 840

Query: 879 LMDVIYCWSKGATFAEVIQMTDI-----FEGSIIRSARRLDEFLNQLRAAAQAVG-EVNL 932
               +Y W++G    +V+   ++       G  +R +R++ + L+Q+R     +G E  +
Sbjct: 841 FAWPVYRWARGEALEKVLTAAEVNGQELSAGDFVRWSRQVVDLLDQIR---DVLGKEHPV 897

Query: 933 EKKFAAASESLRRGIMFSNSL 953
                 AS  LRRG++ +  +
Sbjct: 898 GGAAGKASRLLRRGVVAAGEV 918


>gi|422390285|ref|ZP_16470380.1| HelY [Propionibacterium acnes HL103PA1]
 gi|422465274|ref|ZP_16541881.1| DEAD/DEAH box helicase [Propionibacterium acnes HL060PA1]
 gi|422564375|ref|ZP_16640026.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA2]
 gi|314967064|gb|EFT11163.1| DEAD/DEAH box helicase [Propionibacterium acnes HL082PA2]
 gi|315092732|gb|EFT64708.1| DEAD/DEAH box helicase [Propionibacterium acnes HL060PA1]
 gi|327327198|gb|EGE68974.1| HelY [Propionibacterium acnes HL103PA1]
          Length = 917

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 284/939 (30%), Positives = 450/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKHSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKANLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRHGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKVIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGYAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QLEKK--LMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +LE++   + +   P +V   L  L  G +I V   G    W VVV+         GT  
Sbjct: 545 ELEREQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHARWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 ARGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QIAELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|381161954|ref|ZP_09871184.1| superfamily II RNA helicase [Saccharomonospora azurea NA-128]
 gi|379253859|gb|EHY87785.1| superfamily II RNA helicase [Saccharomonospora azurea NA-128]
          Length = 918

 Score =  339 bits (870), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 272/921 (29%), Positives = 447/921 (48%), Gaps = 67/921 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A    F  D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 29  FAADVGFTFDDFQVRGCEALEDGHGVLVCAPTGAGKTIVGEFAVHLALAEGRKCFYTTPI 88

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY  S  L ++ +V
Sbjct: 89  KALSNQKYGDLVERYGPDTVGLLTGDTSINGGAQIVVMTTEVLRNMLYAESSALDDLGYV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 149 VMDEVHYLADRFRGAVWEEVILHLPSYVRVVGLSATVSNAEEFGEWLVEV-RGDTTVVVD 207

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           + RP PL  ++  VGG    L   E     E    KL    L++     R +  A+ R  
Sbjct: 208 EHRPVPLWQHML-VGGRLFDLFAGEAVDSGE---AKLNPHLLRRVEDTARMHAPAAFRGR 263

Query: 307 KGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQE 358
               G      ++      IV+ +      P IVF FSR  C+        S L  NT E
Sbjct: 264 GRRGGPFRGPRYRPPARPEIVERLDSAGLLPAIVFIFSRAGCDAAVTQCVRSGLRLNTPE 323

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E + V ++       L + D  +         L++G+A HH+GLLP  KE VE LF  GL
Sbjct: 324 EVEQVRRIVDERTADLPQNDLAVLGYWEWREALEQGVAAHHAGLLPAFKETVEELFVRGL 383

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           VK +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G  
Sbjct: 384 VKVVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHA 443

Query: 479 IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ SF QFQ
Sbjct: 444 VVVWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAVNLVGRF-GSDKARELLEQSFAQFQ 502

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEIT-- 590
            ++++  + +++ + EE   +L    +A      E+  Y  L+  ++  EK L  + T  
Sbjct: 503 ADRSVVGLSRRIDRNEE---ALRGYADAVTGDLDELRSYLALRKRVSDREKTLARQNTSN 559

Query: 591 ---RPERVLYYLGSGRLIKVREGGTDWGWGVV----VNVVKKPSAGVGTLPSRGGGYIVP 643
              +  R L  L  G +I V +G    G  VV    V+   +P   V T   R  G +  
Sbjct: 560 RRAQTARSLEQLRKGDVIAVPQGRRA-GLAVVIDPGVDQFDEPRPVVVT-EDRWSGALSL 617

Query: 644 VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P  +  L +++L    +LR    R+ +  +++ L  R         P +  K     
Sbjct: 618 SDFPAPVEPLGRLKLPKHVELRSPKTRRDVASSLRNLNIR---------PPRRQKWRSDA 668

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS--QIQKF 759
             D   ++ EL  +L +HP++   D E  +R  +R   +  E +QLK K+  +   + + 
Sbjct: 669 HSD--AELSELRRELRSHPVHGMADREANLRWVERYQRLEAETEQLKRKVAATTHSLARA 726

Query: 760 RDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            D ++   R+L + G++D+DG  V   G+    + +  +LL  E +    ++ L   ++A
Sbjct: 727 FDRIR---RLLSERGYLDSDGDAVTEHGQLLARLYSESDLLAAECIRQRLWHRLAPAELA 783

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           A+ S  +   +       ++      +  QE+ R   ++ ++ +    +D   E      
Sbjct: 784 AVVSTLVYEARRDSAAEAKLPSGPVSEAWQETVRVWTDLVDDERRH-RLDRTREPDA--G 840

Query: 879 LMDVIYCWSKGATFAEVIQMTDI-----FEGSIIRSARRLDEFLNQLRAAAQAVG-EVNL 932
               +Y W++G    +V+   ++       G  +R +R++ + L+Q+R     +G E  +
Sbjct: 841 FAWPVYRWARGEALEKVLTAAEVNGQELSAGDFVRWSRQVVDLLDQIR---DVLGKEHPV 897

Query: 933 EKKFAAASESLRRGIMFSNSL 953
                 AS  LRRG++ +  +
Sbjct: 898 GGAAGKASRLLRRGVVAAGEV 918


>gi|375101143|ref|ZP_09747406.1| superfamily II RNA helicase [Saccharomonospora cyanea NA-134]
 gi|374661875|gb|EHR61753.1| superfamily II RNA helicase [Saccharomonospora cyanea NA-134]
          Length = 918

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 272/921 (29%), Positives = 447/921 (48%), Gaps = 67/921 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A   +F+ D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 29  FAADVAFDFDDFQIQGCEALEDGHGVLVCAPTGAGKTVVGEFAVHLALAEGRKCFYTTPI 88

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY  S  L ++ +V
Sbjct: 89  KALSNQKYGDLVERYGPDAVGLLTGDTSVNGSAQIVVMTTEVLRNMLYANSAALDDLGYV 148

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 149 VMDEVHYLADRFRGAVWEEVILHLPAYVRVVGLSATVSNAEEFGEWLVEV-RGDTTVVVD 207

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
           + RP PL  ++F VGG  L L   +     E    KL    L++     R +  A  R  
Sbjct: 208 EHRPVPLWQHMF-VGGRMLDLFAADAADTGE---AKLNPQLLRRVEDTARMHAPAGLRGR 263

Query: 307 KGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQE 358
                      ++      +V  +      P IVF FSR  C+        S L  NT E
Sbjct: 264 GRRGAPYRGPRYRPPSRTEVVDRLDAAGLLPAIVFIFSRAGCDAAVAQCVRSGLRLNTPE 323

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E + V ++       L + D  +         L++GIA HH+GLLP  KE VE LF  GL
Sbjct: 324 EVEQVRRIVDERTADLPQNDLAVLGYWEWREALEQGIAAHHAGLLPAFKETVEELFVRGL 383

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           VK +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  G  
Sbjct: 384 VKVVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHA 443

Query: 479 IIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQ 538
           +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ SF QFQ
Sbjct: 444 VVVWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAVNLVGRF-GSAKARELLEQSFAQFQ 502

Query: 539 YEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRP 592
            ++++  + +++   E  A +L    +A      E+  Y  L+  ++  EK L  + T  
Sbjct: 503 ADRSVVGLSRRI---ERNAEALRGYADAVTGDVDELRSYLALRKRVSDREKVLARQNTTA 559

Query: 593 ERV-----LYYLGSGRLIKVREGGTDWGWGVVVNV----VKKPSAGVGTLPSRGGGYIVP 643
            R      L  L  G +I V +G    G  VVV+       +P   V T   R  G +  
Sbjct: 560 RRAQTARSLEKLRKGDVIAVPQGRRA-GLAVVVDPGVDQFDEPRPVVVT-EDRWSGALSL 617

Query: 644 VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P  +  L +++L    +LR    R+ I  +++ L  R     P+    +     DPE
Sbjct: 618 SDFPAPVEPLGRLKLPKHVELRSPKTRRDIASSLRNLGLR----PPRRQKWRSDAHSDPE 673

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS--QIQKF 759
                  + EL  +L +HP++ + D E  +R  +R   +  E +QLK K+  +   + + 
Sbjct: 674 -------LGELRRELRSHPVHGTPDREANLRWVERYLRLEAETEQLKRKVAATTHSLARA 726

Query: 760 RDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
            D ++    +L + G++D  G  V   GR    + +  +LL  E +    ++ L   ++A
Sbjct: 727 FDRIRG---LLSERGYLDDGGDTVTEHGRLLARLYSESDLLAAECIRQRLWHGLAPAELA 783

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           A+ S  +   +       ++      +  QE+ R   ++ ++ +    +D   E      
Sbjct: 784 AVVSTLVYEARRDSPAESKLPSGPVSEAWQETVRVWTDLVDDERRH-RLDRTREPDA--G 840

Query: 879 LMDVIYCWSKGATFAEVIQMTDI-----FEGSIIRSARRLDEFLNQLRAAAQAVG-EVNL 932
               +Y W++G +  +V+   ++       G  +R +R++ + L+Q++     +G E  +
Sbjct: 841 FAWPVYRWARGESLEKVLTTAEVNGQELSAGDFVRWSRQVVDLLDQIK---DVLGREHPV 897

Query: 933 EKKFAAASESLRRGIMFSNSL 953
                 AS  LRRG++ +  +
Sbjct: 898 GGAAGKASRLLRRGVVAAGEV 918


>gi|383831485|ref|ZP_09986574.1| superfamily II RNA helicase [Saccharomonospora xinjiangensis XJ-54]
 gi|383464138|gb|EID56228.1| superfamily II RNA helicase [Saccharomonospora xinjiangensis XJ-54]
          Length = 946

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 277/929 (29%), Positives = 449/929 (48%), Gaps = 74/929 (7%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A   +F  D FQ      LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+
Sbjct: 48  FASDVAFTFDEFQIRGCEALEDGHGVLVCAPTGAGKTIVGEFAVHLALAEGRKCFYTTPI 107

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L   +    VGL+TGD +++  A  +VMTTE+LR MLY  S  L ++ +V
Sbjct: 108 KALSNQKYGDLVDRYGPDAVGLLTGDTSINGGAQIVVMTTEVLRNMLYAESSTLDDLGYV 167

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F EW+  + +    VV  
Sbjct: 168 VMDEVHYLADRFRGAVWEEVILHLPSYVRVVGLSATVSNAEEFGEWLMEV-RGDTDVVVD 226

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEK------EQFREDNFVKLQDTFLKQKIGGRRENGK 300
           + RP PL  ++F VGG  L L   E+       +  E    KL    L++     R +  
Sbjct: 227 EHRPVPLWQHMF-VGGRMLDLFAGERIDTEGTGEKGEKGEAKLNPQLLRKVEDTARMHAP 285

Query: 301 ASGRMAKGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKL 352
           A  R             ++      IV  +      P IVF FSR  C+        S+L
Sbjct: 286 AGLRGRGRRGAPYRGPRYRPPSRTEIVDRLDAAGLLPAIVFIFSRAGCDAAVAQCVRSRL 345

Query: 353 DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
             N  EE + V ++       L + D  +         L++GIA HH+GLLP  KE VE 
Sbjct: 346 RLNGPEEIEQVRRIVDERTAELPQSDLAVLGYWEWREALEQGIAAHHAGLLPAFKETVEE 405

Query: 413 LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
           LF  GLVK +FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG 
Sbjct: 406 LFVRGLVKVVFATETLALGINMPARTVVLERLVKYNGEAHVDLTPGEYTQLTGRAGRRGI 465

Query: 473 DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
           D  G  +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ 
Sbjct: 466 DVEGHAVVVWQPGVDPRQVAGLASTRTYPLRSSFRPGYNMAVNLVGRF-GSAAARELLER 524

Query: 533 SFHQFQYEKALPDIGKKVSK-LEEEAASLDA-SGE-AEVAEYHKLKLDIAQLEKKLMSEI 589
           SF QFQ ++++  + +++ + +E      DA +G+  E+  Y  L+  +++ EK L  + 
Sbjct: 525 SFAQFQADRSVVGLSRRIDRNVEALRGYADAVTGDVTELRAYLTLRQRVSEREKVLARQN 584

Query: 590 TRPERVLYYLGSGRLIKVREG-------GTDWGWGVVVNV----VKKPSAGVGTLPSRGG 638
           T   R      +G L K+R+G       G   G  VVV+       +P   V T   R  
Sbjct: 585 TASRRAQT---AGSLEKLRKGDVIAVPQGRRAGLAVVVDPGVDQFDEPRPVVVT-EDRWA 640

Query: 639 GYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMK 697
           G +     P  +  L +++L    +LR    R+ +  +++ L  R     P+    +   
Sbjct: 641 GPLSLSDFPAPVEPLGRLKLPKHVELRSPKTRRDVAASLRNLGLR----PPRRTKWRSDA 696

Query: 698 IEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDS-- 754
             DPE+ DL  Q+         HP++   D E  +R  +R   +  E +QLK K+  +  
Sbjct: 697 HSDPELADLRRQLRN-------HPVHGMADREANLRWVERYQRLEAETEQLKRKVAATTH 749

Query: 755 QIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
            + +  D ++   R+L + G +D +G  V   GR    + +  +LL  E +    ++ L 
Sbjct: 750 SLARAFDRIR---RLLSERGFLDTEGDAVTEHGRLLARLYSESDLLAAECIRQRLWHGLA 806

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             ++AA+ S  +   +       ++         QE+ R   ++     +E      ++ 
Sbjct: 807 PAELAAVVSTLVYEARRDATTESKLPAGPVSTAWQETVRVWTDL-----VEDERRHRLDR 861

Query: 874 TVRP---FLMDVIYCWSKGATFAEVIQMTDI-----FEGSIIRSARRLDEFLNQLRAAAQ 925
           T  P   F   V Y W++G T  +V+   ++       G  +R +R++ + L+Q++    
Sbjct: 862 TREPDAGFAWPV-YRWARGETLEKVLTAAEVNGQELSAGDFVRWSRQVVDLLDQIK---D 917

Query: 926 AVG-EVNLEKKFAAASESLRRGIMFSNSL 953
            +G E  +      AS  LRRG++ +  +
Sbjct: 918 VLGREHPVGGAAGKASRLLRRGVVAAGEV 946


>gi|422459132|ref|ZP_16535780.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA2]
 gi|315103795|gb|EFT75771.1| DEAD/DEAH box helicase [Propionibacterium acnes HL050PA2]
          Length = 917

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 284/939 (30%), Positives = 450/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKHSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKANLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRHGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKVIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGYAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G +  W VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRNARWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 ARGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QIAELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|238059066|ref|ZP_04603775.1| DEAD/DEAH box helicase domain-containing protein [Micromonospora
           sp. ATCC 39149]
 gi|237880877|gb|EEP69705.1| DEAD/DEAH box helicase domain-containing protein [Micromonospora
           sp. ATCC 39149]
          Length = 933

 Score =  339 bits (870), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 284/947 (29%), Positives = 459/947 (48%), Gaps = 111/947 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD--------- 118
           E      F+LD FQR +   LER   VLV A T AGKT V E+A+ +A R          
Sbjct: 26  EFTLDLGFDLDDFQREACQALERGSGVLVCAPTGAGKTVVGEFAVHLALRGAPGRPAAAD 85

Query: 119 -------KQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEIL 169
                  +++  YT+P+KALSNQKY +L + +    VGL+TGD  ++ +A  +VMTTE+L
Sbjct: 86  GDDAPPARRKCFYTTPIKALSNQKYHDLVERYGVAHVGLLTGDNAINGDAPVVVMTTEVL 145

Query: 170 RGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQF 229
           R MLY GS  L+ +A+V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F
Sbjct: 146 RNMLYAGSATLEGLAYVVMDEVHYLADRFRGGVWEEVIIHLPSSVTLVSLSATVSNAEEF 205

Query: 230 AEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL----QD 285
           A+W+  +  +   VV ++ RP PL  ++  VG     L  D     + D   +L    ++
Sbjct: 206 ADWLVTVRGETA-VVVSEHRPVPLWQHML-VGKRMFDLFHDADAARKHDVHPELLRYTRE 263

Query: 286 TFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE-- 343
           T  + ++G  R  G   GR      G    DI   V  +      P I+F FSR  C   
Sbjct: 264 TMRRLELGEGRSAGPGGGRRGPRWRGPLRPDI---VDRLDREGLLPAILFIFSRAGCAAA 320

Query: 344 -QHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGL 402
            Q  ++ + L   + EE+  + +V ++ V  +  ED  +      L  L+RG+A HH+G+
Sbjct: 321 VQQCLA-AGLRLTSPEERAEIRRVVESRVTAIPGEDLTVLGYWEWLDGLERGLAAHHAGM 379

Query: 403 LPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQ 462
           LPV KE+VE LF  GLVKA+FATET A+G+NMPA+ VV   + K++G++H  +  GEY Q
Sbjct: 380 LPVFKEVVEELFVRGLVKAVFATETLALGINMPARCVVLERLVKFNGEAHVDLTPGEYTQ 439

Query: 463 MSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEG 522
           ++GRAGRRG D  G  +++   + +   +  +   +  PL S+FR SY   +NL+    G
Sbjct: 440 LTGRAGRRGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVGTV-G 498

Query: 523 QFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA-------EYHKLK 575
              A  ++++SF QFQ ++++  + ++V +  E   ++DA G AE A       EY  L+
Sbjct: 499 AEPARALLESSFAQFQADRSVVGLARQVQRNTE---TIDAYG-AEAACHHGDFDEYFALR 554

Query: 576 LDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGV 630
           + IA  E+ +  +     +      L  L  G +I+V  G         + VV  P+ G 
Sbjct: 555 VAIADRERAIARQGQHQRKAAAVAALERLRVGDVIRVPSGRR-----AGLAVVLDPATGG 609

Query: 631 GTLP-------SRGGGYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESR 682
              P        R  G + P      +  L++IR+    + R   AR+ +   V      
Sbjct: 610 FGEPRPLVLTQDRWAGRVSPGDFTTPAEVLARIRVPKHFNHRSPAARRDLAAEVSG---- 665

Query: 683 FPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVN 741
              GL +    +  +       D  + + +L  +L  HP +   + E   R  +R+  + 
Sbjct: 666 --TGLDRHGGRRGGRSRQGSGED--HALSQLRAELRRHPCHACPEREEHARWAERRRRLE 721

Query: 742 HEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELL 799
            + ++L+ ++  R   + +  D +     +L   G++ ADG V   GR    I T  +LL
Sbjct: 722 RDTEELRERVAGRTGSLARTFDRIVA---LLTARGYLSADGAVTDAGRMLGRIWTEADLL 778

Query: 800 VTELMFNGTFNDLDHHQVAALASCFI-------------PVDKSSEQINLRMELAKPLQQ 846
           V E +  G ++ L   ++A+  S  +             P    SE ++  + L   ++ 
Sbjct: 779 VAECLRRGVWDGLSPAELASAVSVVVFEARRDVDERASLPRGPVSEAVDETLNLWSGIEA 838

Query: 847 LQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQM-----TDI 901
             E+AR +A +  E  L                   IY W++G   A+V+        ++
Sbjct: 839 -DEAARGLA-VTREPDLGFAWP--------------IYRWARGEALAKVLASGHEIDGEM 882

Query: 902 FEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
             G  +R AR++ + L QL  +  A  E+    + A A  ++ RG++
Sbjct: 883 PAGDFVRWARQVVDLLGQLADSGGASAELRATARQAIA--AVNRGVL 927


>gi|302550281|ref|ZP_07302623.1| ATP-dependent RNA helicase [Streptomyces viridochromogenes DSM
           40736]
 gi|302467899|gb|EFL30992.1| ATP-dependent RNA helicase [Streptomyces viridochromogenes DSM
           40736]
          Length = 946

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 269/929 (28%), Positives = 444/929 (47%), Gaps = 85/929 (9%)

Query: 48  YALTKDEAIHGTFANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAV 107
           YA  ++ A+    A   +     + Y F LDPFQ  +   LE  + VLV+A T +GKT V
Sbjct: 23  YAAARERAVEQATALASFR----EMYDFGLDPFQIEACQALEEGKGVLVAAPTGSGKTIV 78

Query: 108 AEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMT 165
            E+A+ +A    ++  YT+P+KALSNQKY +L + +  + VGL+TGD +++ +A  +VMT
Sbjct: 79  GEFAVHLALLQGKKCFYTTPIKALSNQKYADLCRRYGTEKVGLLTGDNSVNSDAPVVVMT 138

Query: 166 TEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSN 225
           TE+LR MLY GS+ L  + +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SN
Sbjct: 139 TEVLRNMLYAGSQTLLGLGYVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSN 198

Query: 226 ATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVK 282
           A +F +W+  + +    V+ ++ RP PL  +V  + G  +Y + +E E  ++    +  +
Sbjct: 199 AEEFGDWLDTV-RGDTEVIVSEHRPVPLFQHV--LAGRRMYDLFEEGEGRKKAVNPDLTR 255

Query: 283 LQDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSF 337
           +      +     R  G++     +       S I+     ++++ +      P I F F
Sbjct: 256 MARMEASRPSYQDRRRGRSMREADRERERRQRSRIWTPSRPEVIERLDAEGLLPAITFIF 315

Query: 338 SRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGI 395
           SR  CE        + L  N +E ++ V  + +     +  ED ++      L  L+RGI
Sbjct: 316 SRAACEAAVQQCLYAGLRLNDEEAREQVRSLVEERTASIPAEDLHVLGYYEWLEGLERGI 375

Query: 396 AVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI 455
           A HH+G+LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I
Sbjct: 376 AAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADI 435

Query: 456 GSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILN 515
             GE+ Q++GRAGRRG D  G  +++    M    L  +   +  PL S+F+ SY   +N
Sbjct: 436 TPGEFTQLTGRAGRRGIDVEGHAVVLWQRAMNPEHLAGLAGTRTYPLRSSFKPSYNMAVN 495

Query: 516 LMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYH 572
           L+ +  G+  +  +++ SF QFQ +K++  I ++V + EE      AS    +    EY 
Sbjct: 496 LVEQF-GRHRSRELLETSFAQFQADKSVVGISRQVQRNEEGLEGYKASMTCHLGDFEEYA 554

Query: 573 KLKLDIAQLEKKLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPS 627
           +L+ ++   E ++  +     R      L  L  G +I V  G    G  +V++    P 
Sbjct: 555 RLRRELKDRENEIARQGAAHRRAEAAVALEKLKPGDVIHVPTGKYA-GLALVLD----PG 609

Query: 628 AGVGTLPSRGGGYIVPVQLPLISTLSK-----IRLSVPPDLRPLDARQSILLAVQELESR 682
              G      G        PL+ T  +       +  P  + PL+ R  I    +    R
Sbjct: 610 LPAGRSNGHRGFEQHDGPRPLVLTAERQVKRLASMDFPVPVEPLE-RMRI---PKSFNPR 665

Query: 683 FPQGLPKLN----------PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQI 731
            PQ    L           P +  +    +  D   +I  L   L AHP +   D E+  
Sbjct: 666 SPQSRRDLASALRTKAGHIPAERHRKRRSQAAD-DREIARLRTALRAHPCHGCDDREDHA 724

Query: 732 RCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAA 789
           R  +R   +  +  QL+ ++  R + I +  D +     +L +L ++ AD V +   R A
Sbjct: 725 RWAERYHRLLRDTSQLERRIEGRTNTIARTFDRIVA---LLTELDYLRADEVTEHGKRLA 781

Query: 790 CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI--------------PVDKSSEQIN 835
            L    D LL +E +  G +  L   ++AA  S  +              P  K+   + 
Sbjct: 782 RLYGELD-LLASECLREGVWEGLGPAELAACVSALVFESRVADDAMAPKLPSGKAKAALG 840

Query: 836 LRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEV 895
             + +   L  L+E  R I + +   + E ++                Y W+ G    EV
Sbjct: 841 EMVRIWGRLDALEEEFR-ITQTEGVGQREPDLG----------FAWAAYMWASGKGLDEV 889

Query: 896 IQMTDIFEGSIIRSARRLDEFLNQLRAAA 924
           ++  ++  G  +R  +++ + L Q+ AAA
Sbjct: 890 LREAEMPAGDFVRWCKQVIDVLGQIAAAA 918


>gi|383780514|ref|YP_005465080.1| helY putative ATP-dependent RNA helicase [Actinoplanes
           missouriensis 431]
 gi|381373746|dbj|BAL90564.1| helY putative ATP-dependent RNA helicase [Actinoplanes
           missouriensis 431]
          Length = 918

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 270/905 (29%), Positives = 443/905 (48%), Gaps = 54/905 (5%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR-VIYTSPLKALS 132
            F+LD FQR +   LER   VLV A T AGKT V E+A+ +A R  +R   YT+P+KALS
Sbjct: 32  GFDLDDFQREACEVLERGNGVLVCAPTGAGKTVVGEFAVHLALRSGERKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L   +    VGL+TGD  ++ +A  +VMTTE+LR MLY GS+ L+ +A+V+ DE
Sbjct: 92  NQKYNDLVARYGADKVGLLTGDNAINGDAPVVVMTTEVLRNMLYSGSDQLRNLAYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SN  +FA+W+  +  +   VV ++ RP
Sbjct: 152 VHYLADRFRGAVWEEVIIHLPASVTLVSLSATVSNYEEFADWLVTVRGK-TEVVVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL--QDTFLKQKIGGRRENGKASGRMAKG 308
            PL  ++  VG     L  D     + D   +L      + +++      G         
Sbjct: 211 VPLWQHML-VGRRMFDLFHDADAAKKHDVHPELLRYTREMDRRLDLTDRAGSGWSGRGGR 269

Query: 309 GSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE---QHAMSMSKLDFNTQEEKDTVEQ 365
                     ++V+ +      P I+F FSR  C+   Q  ++ + L     +E+  + +
Sbjct: 270 SRRWQPPPRAEVVERLERAGLLPAILFIFSRAACDAAVQQCLA-AGLRLTGPDERAQIRE 328

Query: 366 VFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFAT 425
           + Q  V  +  ED ++      L  L+RG+A HH+G+LP  KE VE  F  GLVKA+FAT
Sbjct: 329 IAQAKVANIPAEDLSVLGYWEWLDGLERGVAAHHAGMLPAFKEAVEECFVRGLVKAVFAT 388

Query: 426 ETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQ 485
           ET A+G+NMPA+ VV   + K++G++H  +  GEY Q++GRAGRRG D  G  +++    
Sbjct: 389 ETLALGINMPARCVVLERLVKFNGEAHVDLTPGEYTQLTGRAGRRGIDVEGHAVVLWSPD 448

Query: 486 MEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD 545
           ++   +  +   +  PL S+FR SY   +NL+    G   +  ++++SF QFQ ++++  
Sbjct: 449 VDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVGTV-GAERSRALLESSFAQFQADRSVVG 507

Query: 546 IGKKVSKLEE--EAASLDASG-EAEVAEYHKLKLDIAQLEKKLMSEITRPER-----VLY 597
           + ++V + EE  +  S DA+    +  EY  +++ IA  EK L  +  +  R      L 
Sbjct: 508 LARQVQRNEETMQTYSEDATCHHGDFEEYFGIRVAIADREKSLSRQGVQQRRSAAVAALE 567

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG------TLPSRGGGYIVPVQL-PLIS 650
            L  G +I+V   G   G  VV+  V   + G G          R  G + P      + 
Sbjct: 568 KLRIGDVIRV-PNGKRAGLAVVLEPV---TGGFGEPRPLVLTQDRWAGRVSPADFGGPVD 623

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQI 710
            L+++R+    + R   AR+   LA Q   +   +   +    +    ED E+  L  ++
Sbjct: 624 VLARVRVPKNFNHRSPAARRD--LAAQVSGTGLDRHPDRRRRSRQSPGEDAEIALL--KV 679

Query: 711 EELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKNRSR 768
              +H   A P    + E+  R  +R+  +  +   L+ K+  R   + +  D++     
Sbjct: 680 RMRQHPCHACP----EREDHARWAERRHRLLRDTDALRDKVAGRTGSLARTFDQV---CA 732

Query: 769 VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           VL   G++ ADG V   GR    I +  +LLV E +  G ++ L   ++AA  S  +   
Sbjct: 733 VLTTRGYLSADGEVTDAGRTLGRIWSEADLLVAECLRQGVWDGLAPDELAAAVSMVLYES 792

Query: 829 KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
           +   +    +        +   A+   EI  +   E      +     P  +  +Y W++
Sbjct: 793 RRESEDRASVPKGPITAAVDACAKLWGEIAAD---EAEHGLTLTREPDPGFVWPMYRWAR 849

Query: 889 GATFAEVIQM-----TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESL 943
           G   A V+        D+  G  +R AR++ + L Q+R A  A   V    + A +  ++
Sbjct: 850 GEPLARVLASGHQYDADMPAGDFVRWARQVLDLLGQIREAGSASPSVKETARKAIS--AV 907

Query: 944 RRGIM 948
            RG++
Sbjct: 908 NRGVL 912


>gi|170782067|ref|YP_001710399.1| helicase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169156635|emb|CAQ01787.1| putative helicase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 823

 Score =  339 bits (869), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 200/539 (37%), Positives = 309/539 (57%), Gaps = 31/539 (5%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAF-RDKQRVIYTSP 127
            A    F+LDPFQR +   LE   SVLV+A T AGKT VAE+A+ +A  R   ++ YT+P
Sbjct: 26  FASGLRFDLDPFQRAAAESLENGRSVLVAAPTGAGKTIVAEFAVYLAMQRPSAKIFYTAP 85

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY EL  E+   +VGL+TGD  ++  A  +VMTTE+LR MLY  S++L+++A+
Sbjct: 86  MKALSNQKYAELVAEYGPDEVGLLTGDTNVNSRARIVVMTTEVLRNMLYADSDLLRDLAF 145

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           VI DE+HY+ DR RG VWEE II LP +++M+ LSAT+SNA +F +W+  +  +   V+ 
Sbjct: 146 VIMDEVHYLADRFRGAVWEEVIIHLPQSVRMISLSATVSNAEEFGDWLQAVRGE-TDVIV 204

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG-- 303
           ++ RP PL+ +V        + ++D  +        ++    ++   GG RE  +  G  
Sbjct: 205 SEERPVPLEQHVIV-----RHRMLDLFDSSGLAATHRVNPELVRMTHGGGREAVRVRGGQ 259

Query: 304 --------------RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
                         R A G    G  D  ++V ++ ER   P I F FSR  C+     +
Sbjct: 260 GHSRGRAGAGGGSGRRAPGPWDRGRMDRPEVVALLEERNLLPAIFFIFSRAGCDAAVTQV 319

Query: 350 --SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             + +      E+D +  V +     L +ED  +      L  L+RG+A HH+G+LP  K
Sbjct: 320 LRAGVRLTHAHERDEIRAVVEERCRTLRDEDLAVLGYWEWLEGLERGVAAHHAGMLPAFK 379

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LFQ  LVKA+FATET A+G+NMPA+TVV   ++K++G++   +  GEY Q++GRA
Sbjct: 380 EVVEELFQRKLVKAVFATETLALGINMPARTVVLEQLEKFNGEARVPLTPGEYTQLTGRA 439

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +I   + ++   +  +   +  PL S+FR +Y   +NL+ +   + T E
Sbjct: 440 GRRGIDVEGHAVIQWKDGLDPQAVASLASRRTYPLNSSFRPTYNMAVNLIDQFGRERTRE 499

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEK 583
            V+++SF QFQ ++A+ D+ +KV   EE  A  + +    +    EY  L+ +++ LE+
Sbjct: 500 -VLESSFAQFQADRAVVDLARKVRTQEESLAGYEKAMVCHLGDFREYSGLRRELSDLER 557



 Score = 45.8 bits (107), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 118/257 (45%), Gaps = 25/257 (9%)

Query: 709 QIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRD--SQIQKFRDELKN 765
           Q+ +L  ++ AHP +  +D E+  R  +R   +  +   L  ++R   + + K  D +  
Sbjct: 580 QLTDLRRRMKAHPCHACKDRESHARWAERWWRLKRQTDALGQQIRTRTNAVAKVFDRV-- 637

Query: 766 RSRVLKKLGHID--ADGVV--QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALA 821
            + +L  LG++   ADG V     GR    I    +LL+ E +    + DLD   +AA+A
Sbjct: 638 -TELLLSLGYLKRAADGQVAPTPNGRMLKRIYGDRDLLIAECLRTQVWVDLDPAALAAMA 696

Query: 822 SCFI--PVDKSSEQ--INL-RMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
           +  +  P+    ++   NL R      L++ +E   ++ +++ E +L    D        
Sbjct: 697 ASLVYQPLRDEGDRNDRNLPRGAFRAALERTEEIWSRLDDVERERRLP-TTDPLSTGLCA 755

Query: 877 PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
           P     ++ W++G +   V+   D+  G  +R  ++  + L+QL      V +  + +  
Sbjct: 756 P-----MHRWARGGSLDAVLDEADLAAGDFVRWTKQTIDLLDQL----SIVADGPVSRNA 806

Query: 937 AAASESLRRGIMFSNSL 953
             A +S+RRGI+  +S+
Sbjct: 807 RTALDSIRRGIVAYSSV 823


>gi|443479093|ref|ZP_21068748.1| DSH domain protein [Pseudanabaena biceps PCC 7429]
 gi|443015488|gb|ELS30416.1| DSH domain protein [Pseudanabaena biceps PCC 7429]
          Length = 874

 Score =  338 bits (868), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 263/894 (29%), Positives = 436/894 (48%), Gaps = 105/894 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FELDPFQ  ++A L+  +SV+V A T +GKT + EYAI  A   ++RV YT+PLKALS
Sbjct: 10  YPFELDPFQLQAIAALQAGKSVVVCAPTGSGKTLIGEYAIHAALAGERRVFYTTPLKALS 69

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  Q+F D  VGL+TGD +++ +A  LVMTTEI R MLY G+ +      L +V 
Sbjct: 70  NQKLRDFRQQFGDDNVGLLTGDTSVNRDAPILVMTTEIFRNMLY-GTPIGEVGTSLTDVE 128

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESI++ P  +++V LSAT++N+ Q  +WI  +H     ++
Sbjct: 129 VVVLDECHYMNDRQRGTVWEESIVYCPAEVQLVALSATVANSQQLTDWIHKVHGD-TELI 187

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y+DFRP PL+H        G + ++D   Q        L +  L      + E  K    
Sbjct: 188 YSDFRPVPLEHSF--CSSKGFFPLLDSSSQKINPRLKPLTNKPL-----SKEERHKIV-- 238

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
                       I  ++  + +R   P I F FSRR C++    +  +     EE   ++
Sbjct: 239 ----------PSIGAVISHLRQRDMLPAIYFIFSRRGCDKSVTDLGNVSLVNAEESLRLK 288

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
               +A    N E      I+     L RGIA HH+G+LP  K  VE LFQ+GL+K +FA
Sbjct: 289 PQI-DAFIAANPEIGKPAHID----ALYRGIAAHHAGILPAWKGFVEELFQQGLIKVVFA 343

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A G+NMPA+T V +++ K     HR + + E++QM+GRAGRRG D+ G  + +   
Sbjct: 344 TETLAAGINMPARTTVISSISKRTDRGHRLLNASEFLQMAGRAGRRGMDEVGYVVTVQTP 403

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE---- 540
                   ++      PLVS F  SY  ++NL+ +      A  +++ SF Q+  +    
Sbjct: 404 FEGAKEAANLATSTADPLVSQFAPSYGMVMNLL-QTHSLEQARDLVERSFGQYLADLNLA 462

Query: 541 ---KALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLY 597
              + L  + ++++KLE++ A++D     ++  Y KL+ D  + EK+L+  + +    + 
Sbjct: 463 PQIQNLESVMEQIAKLEKDLANIDLK---QLEIYDKLR-DRLREEKRLLKMLAQQSEEMR 518

Query: 598 ---------YLGSGRLIKVREGGTDWGWGVVVNVVKKPSA-GVGTLP------------S 635
                    YL SG  + +R        G++V+ V      G G  P            +
Sbjct: 519 LNDLASYAPYLLSGSPLTIRTNK-----GIIVHTVLAAKVQGSGQFPWFVCLGSDNRWYT 573

Query: 636 RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSI-----LLAVQELESRFPQGLPKL 690
            G   IV V   L   L    +  P  L PL   QSI      LA+ +           +
Sbjct: 574 LGYKDIVQVGTDL---LLDGDIDYPSKL-PLRPGQSIEGDEASLAIAQ----------NI 619

Query: 691 NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKS 749
            P+ +  +  PEV+    ++  LE ++  HP++K  D   I +   R  ++  +I   + 
Sbjct: 620 KPLPESALA-PEVLKQQARVIALESEMNRHPVSKMSDRGAIFKKVNRLEQLQRQI-DFQQ 677

Query: 750 KMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTF 809
           K+ + + Q+   E  +   +L+    +        +G+    +   +EL +   + +G  
Sbjct: 678 KVVNERRQRHWQEFMSLVHILQAYDCLQETQPTD-RGKVVAALRGENELWLALCLMSGEM 736

Query: 810 NDLDHHQVAALASCFIPVDKSSE---QINLRMELAKPLQQLQESARKIAEIQNECKLEVN 866
           ++L  H +A + +  +  +   +   +  L   +   L  L+E  R++ ++Q   +  V+
Sbjct: 737 DNLSPHHLATVCAAIVSENSRPDNWIKFGLSPTVEDALDGLREVRRQLMQVQR--RHLVD 794

Query: 867 VDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           +  +++      L  ++  W+ G  ++E+ Q T++ EG I+R  RR  + L Q+
Sbjct: 795 IPAWLDYE----LTGLVEQWALGMEWSELCQNTNLDEGDIVRLMRRTIDLLYQI 844


>gi|182439666|ref|YP_001827385.1| ATP-dependent RNA helicase [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|326780331|ref|ZP_08239596.1| DSH domain protein [Streptomyces griseus XylebKG-1]
 gi|178468182|dbj|BAG22702.1| putative ATP-dependent RNA helicase [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|326660664|gb|EGE45510.1| DSH domain protein [Streptomyces griseus XylebKG-1]
          Length = 946

 Score =  338 bits (868), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 274/944 (29%), Positives = 448/944 (47%), Gaps = 81/944 (8%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+
Sbjct: 26  GPFREMYEFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTT 85

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS  L  + 
Sbjct: 86  PIKALSNQKFADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSPSLSGLG 145

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+
Sbjct: 146 YVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVI 204

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKLQDTFLKQKIGGR 295
            ++ RP PL  +V  + G  +Y + +E           RE N   V+L     +     R
Sbjct: 205 VSEHRPVPLWQHV--MAGRKMYDLFEETTDHGGRGAGRREVNPDLVRLARQESQNVYNPR 262

Query: 296 -RENGKASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS- 348
            R  GK      +         I+     +++  +      P I F FSR  CE      
Sbjct: 263 DRRRGKMVREADRERERRQRGRIWTPGRPEVIDRLDNEGLLPAITFIFSRAGCEAAVQQC 322

Query: 349 -MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             + L  N ++++  V ++ +     +  ED ++      L  L+RGIA HH+G+LP  K
Sbjct: 323 LYAGLRLNDEDKRRLVREIVEERTASIPGEDLHVLGYYEWLEGLERGIAAHHAGMLPTFK 382

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRA
Sbjct: 383 EVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRA 442

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +++    M+   L  +   +  PL S+FR SY   +NL+ +  G+  + 
Sbjct: 443 GRRGIDVEGHAVVLWQRGMDPTGLAGLAGTRTYPLRSSFRPSYNMAVNLVQQF-GRHRSR 501

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQL 581
            +++ SF QFQ +K++  I ++V + EE    L+   E       +  EY +L+ D+   
Sbjct: 502 ELLETSFAQFQADKSVVGISRQVQRNEE---GLEGYKEGMTCHLGDFEEYARLRRDLKDR 558

Query: 582 EKKLMSE-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSR 636
           E +L  +            L  L  G +I V  G         + +V  P    G     
Sbjct: 559 ETELAKQGAAQRRAAAASSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAGRANGH 613

Query: 637 GGGYIVPVQLPLISTLSK-----------------IRLSVPPDLRPLDARQSILLAVQEL 679
            G        PL+ T  +                  R+ VP    P   +       ++L
Sbjct: 614 RGFDHHDGPRPLVLTAERQVKRLASMDFPVPVEALDRMRVPKSFNPRSPQSR-----RDL 668

Query: 680 ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKA 738
            S        + P +  K   P   D   +I  L  +L AHP +   + E+  R  +R  
Sbjct: 669 ASALRTKAGHIVPDRHRKGRAPAADD--REIARLRTELRAHPCHGCDEREDHARWAERYH 726

Query: 739 EVNHEIQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
            +  + +QL+ ++  R + I +  D +     +L +L ++  + V     R A L    D
Sbjct: 727 RLQRDTRQLEKRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTANGRRLARLYGELD 783

Query: 797 ELLVTELMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIA 855
            LL +E +  G +  L+  ++AA  S  +    ++ + +  ++        + E  R   
Sbjct: 784 -LLASECLREGVWEGLNPAELAACVSALVYEARQADDAVAPKLPSGPAKVAMGEMVRIWG 842

Query: 856 EIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARR 912
            +   E   ++N  E V     P L     +Y W+ G T  EV++  ++  G  +R  ++
Sbjct: 843 RLDALEEDFKINQTEGV-GQREPDLGFAWAVYMWASGRTLDEVLREAEMPAGDFVRWCKQ 901

Query: 913 LDEFLNQLRAAA---QAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + + L Q+ AAA      G  ++ K    A +++ RG++  +S+
Sbjct: 902 VIDVLGQVAAAAPRDAGEGASSVAKNARKAVDAVLRGVVAYSSV 945


>gi|357393593|ref|YP_004908434.1| putative ATP-dependent helicase [Kitasatospora setae KM-6054]
 gi|311900070|dbj|BAJ32478.1| putative ATP-dependent helicase [Kitasatospora setae KM-6054]
          Length = 967

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 277/951 (29%), Positives = 449/951 (47%), Gaps = 111/951 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LD FQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 57  YDFPLDDFQLRACRTLEEGKGVLVAAPTGSGKTIVGEFAVHLALAGGRKCFYTTPIKALS 116

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + +V+ DE
Sbjct: 117 NQKYGDLVKRYGQAKVGLLTGDNSVNGDAPVVVMTTEVLRNMLYAGSSALDGLGYVVMDE 176

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 177 VHYLADRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGGTEVIVSEHRP 235

Query: 251 TPLQHYVFPVGGSGLY-LVVDEKEQFREDNFVKLQDTFLKQKIG--GRRENGKASGRMAK 307
            PL  +V  + G+ +Y L        R    +K     +  ++    R E  +   R A+
Sbjct: 236 VPLWQHV--MAGNRMYDLFASPDRDGRPKGSLKNPAKAVNPELVRLARSEADRGRDRFAR 293

Query: 308 G-----GSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNT 356
           G      +G  G         ++  +      P I F FSR  CE        S L  N 
Sbjct: 294 GRGRSMPAGRPGRVWTPSRVDVIDRLDAEGLLPAITFIFSRAGCEAAVQQCLHSGLRLNR 353

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
             ++  V Q  +     + +ED ++      L  L+RGIA HH+G+LP  KE+VE LF +
Sbjct: 354 DADRFKVRQFVEERCRDIPDEDLHVLGYYEWLDGLERGIAAHHAGMLPRFKEVVEELFVQ 413

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GLVKA+FATET A+G+NMPA++VV   + KW+G++H  I  GEY Q++GRAGRRG D  G
Sbjct: 414 GLVKAVFATETLALGINMPARSVVMEKLVKWNGETHADITPGEYTQLTGRAGRRGIDIEG 473

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             +++    ++   L  +   +  PL S+FR SY   +NL+ +  G+  +  +++ SF Q
Sbjct: 474 HAVVLWQRGLDPEALAGLAGTRTYPLKSSFRPSYNMAVNLVGQF-GRHRSRELLETSFAQ 532

Query: 537 FQYEKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEIT 590
           FQ ++++  I ++V + EE    LD   E+      +  EY  L+ D+   E  L  E +
Sbjct: 533 FQADRSVVGIARQVQRNEE---GLDGYRESMTCHLGDFDEYMALRRDLKDRENALAREGS 589

Query: 591 RPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVP-- 643
              R      +  L  G +I V  G    G  +V++    P +  G    R G +  P  
Sbjct: 590 SQRRNAAVEAIEQLRPGDIIHVPTGKFA-GLALVLDPGLPPDSRSG----RSGHHRHPDF 644

Query: 644 --------------------VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQ----E 678
                               +  P  ++ + ++R+    + R   +R+ +  A++     
Sbjct: 645 QDGPRPVVLTAERQVKRLAMIDFPYPVAAVDRMRIPKSFNPRSPQSRRDLASALRTKAGH 704

Query: 679 LE-SRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
           LE  R+ +G       +    +DPE       I  L   L  HP +   + E+  R  +R
Sbjct: 705 LEPERYRKG-------RAAAADDPE-------ISRLRTALRQHPCHGCDEREDHARWSER 750

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGD 796
              ++ + + L+ +MR S+             +L  LG++ AD V     R A L    D
Sbjct: 751 YHRLHRDTELLERRMR-SRTHTIARTFDRVCGLLADLGYLSADTVTDDGKRLARLYGELD 809

Query: 797 ELLVTELMFNGTFND--------------LDHHQVAALASCFIPVDKSSEQINLRMELAK 842
            LL +E +  G +N                +  Q     +  +P   + E +   + +  
Sbjct: 810 -LLASECIREGVWNGLAAAELAACASALVYEARQSDDATAPRVPEGGAKEALGKMVRIWS 868

Query: 843 PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
            L  L+E   KI+  +   + E ++                Y W+ G     V++  D+ 
Sbjct: 869 RLDDLEEQ-HKISTAEGVGQREPDLG----------FAWTAYRWALGHDLDAVLRDADMP 917

Query: 903 EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
            G  +R  ++L + L Q++ AA    E  L K    A + +RRGI+  +S+
Sbjct: 918 AGDFVRWTKQLIDVLGQIQDAAGDNTE--LRKTARKAVDGMRRGIIAYSSV 966


>gi|400292973|ref|ZP_10794868.1| DEAD/DEAH box helicase, partial [Actinomyces naeslundii str. Howell
           279]
 gi|399901920|gb|EJN84780.1| DEAD/DEAH box helicase, partial [Actinomyces naeslundii str. Howell
           279]
          Length = 568

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 196/537 (36%), Positives = 291/537 (54%), Gaps = 57/537 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            ++ Y F LDPFQ  + A +ER E VLV+A T AGKT V E+A+ +      +  YT+P+
Sbjct: 25  FSQGYDFPLDPFQEEACAAVERGEGVLVAAPTGAGKTVVGEFAVHLGLVRGLKTFYTTPI 84

Query: 129 KALSNQKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           KALSNQKY +L   H E K VGL+TGD +++P+A  +VMTTE+LR MLY GS  L  + +
Sbjct: 85  KALSNQKYLDLVARHGEEK-VGLLTGDTSVNPHADVVVMTTEVLRNMLYSGSRDLDRLGF 143

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LP  ++++ LSAT+SNA +F +W+  +  +   V+ 
Sbjct: 144 VVMDEVHYLADRFRGPVWEEVIIHLPAEVQVISLSATVSNAEEFGDWLGQVRGRTA-VIV 202

Query: 246 TDFRPTPLQHYVFPVGGSGLYLV-----------------VDEKEQFREDNFVKLQDTFL 288
           ++ RP PL  ++  VG   L+L                   ++  Q  +     L    L
Sbjct: 203 SEERPVPLTQHMM-VGRRLLHLYSRPADAAESSEAADTAESEQAAQSEQTGQPPLNPELL 261

Query: 289 K--------------QKIGGRRENGKASG-----RMAKGG----SGSGGSDI-------- 317
           K               K   R   G   G     R  KGG     G GG+          
Sbjct: 262 KAVKQARRAAASGGASKNSYRSRGGTGRGPQPWKRTVKGGRAPRRGEGGARTARLKPPSR 321

Query: 318 FKIVKMIMERKFQPVIVFSFSRRECEQ--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLN 375
            ++V+ + E +  P IVF FSR  CEQ  H +  + +D  T+ E   + +V +     + 
Sbjct: 322 LQVVRALEEARLLPAIVFVFSRAGCEQAVHQVVSAGVDLTTEAEAARIREVIERRTADIP 381

Query: 376 EEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMP 435
             D  +         L+RG+A HH+GLLPV KE VE LF  GLVK ++ATET A+G+NMP
Sbjct: 382 AGDLGVLGFHFWAHALERGVAAHHAGLLPVFKETVEELFSAGLVKVVYATETLALGINMP 441

Query: 436 AKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMV 495
           A+TVV  +++KW+G +H  +  GEY Q++GRAGRRG D  G  +++  + +E  T+  + 
Sbjct: 442 ARTVVLESLRKWNGSAHVTLSPGEYTQLTGRAGRRGIDVEGHAVVLAADDVEPATVSSLA 501

Query: 496 LGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSK 552
             +  PLVS FR +Y   +NL+ R   +     V++ SF QFQ ++ + ++  +  +
Sbjct: 502 SRRTYPLVSAFRPTYNMAVNLLERMP-RARVREVLEESFAQFQADRGVVELAAQARR 557


>gi|386071112|ref|YP_005986008.1| putative helicase [Propionibacterium acnes ATCC 11828]
 gi|353455478|gb|AER05997.1| putative helicase [Propionibacterium acnes ATCC 11828]
          Length = 917

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 284/939 (30%), Positives = 449/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKHSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKANLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRHGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKVIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGYAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G    W VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHARWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 ARGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QIAELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|422537005|ref|ZP_16612893.1| DEAD/DEAH box helicase [Propionibacterium acnes HL078PA1]
 gi|315080918|gb|EFT52894.1| DEAD/DEAH box helicase [Propionibacterium acnes HL078PA1]
          Length = 917

 Score =  338 bits (867), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 284/939 (30%), Positives = 449/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F  W+  + +     V ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGGWLDEV-RGDVRGVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHVAVA--RRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKRSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQTSRIQVVRSLHKVNLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRRGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKAIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL STF  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGHAVVCWQPGMDPRAVAGLASRRTYPLNSTFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G   GW VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHAGWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 TRGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QITELRSQMKAHPCHSCPDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|282853649|ref|ZP_06262986.1| DEAD/DEAH box helicase [Propionibacterium acnes J139]
 gi|282583102|gb|EFB88482.1| DEAD/DEAH box helicase [Propionibacterium acnes J139]
          Length = 917

 Score =  338 bits (867), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 284/939 (30%), Positives = 449/939 (47%), Gaps = 105/939 (11%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFE D +Q  +   L+    VLV+A T AGKT V EYA  +A     +  YT+P+KALSN
Sbjct: 13  SFEPDDYQVKACQDLDDGAGVLVAAPTGAGKTVVGEYATDLALASGLKCFYTTPIKALSN 72

Query: 134 QKYREL---HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           QK+ +L   H E   VGL+TGDVT++  A  +VMTTE+LR M+YR S  L  + WV+ DE
Sbjct: 73  QKFHDLVARHGE-DQVGLLTGDVTINSEAPVIVMTTEVLRNMIYRNSHTLDTLGWVVLDE 131

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE I+ L P +K+V LSAT+SNA +F EW+  + +    VV ++ RP
Sbjct: 132 VHYLADRFRGPVWEEVILGLDPRVKIVGLSATVSNAEEFGEWLDEV-RGDVRVVVSERRP 190

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRED----NFVKLQDTFLK---QKIGGRRENGKASG 303
            PL  +V       LY + D +     +    +  K +  F +   ++  GR   GK S 
Sbjct: 191 VPLVQHV--AVARRLYELFDSRRPTEVNPELTSIAKEEARFQRDDSRRPRGRSGKGKHSV 248

Query: 304 RMAKGGSGSGGSDI----------------FKIVKMIMERKFQPVIVFSFSRRECEQHAM 347
               G  G   +                   ++V+ + +    P I+F FSR  C+    
Sbjct: 249 SYGTGRFGGASAQRRGRGGRPRGPRNQPSRIQVVRSLHKANLLPAIIFVFSRSGCDAAVS 308

Query: 348 SMSKLDF--NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPV 405
            +   D    +Q+E   + ++ Q   + L +E+R        +   +RGIA HH+GLLPV
Sbjct: 309 QLLNTDLVLTSQQEARQLRRIAQRHGEGLTDEERRAVGWNHFMAAFERGIAAHHAGLLPV 368

Query: 406 IKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSG 465
           IK +VE  F  GL+K + ATET A+G+NMPA+TVV   + K++G +H  I  GEY Q++G
Sbjct: 369 IKVIVEEGFVAGLLKVVVATETLALGINMPARTVVLEKLVKYNGQTHADITPGEYTQLTG 428

Query: 466 RAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFT 525
           RAGRRG D +G  ++     M+   +  +   +  PL S F  +Y   +NL+  + G+  
Sbjct: 429 RAGRRGIDTQGYAVVCWQPGMDPRAVAGLASRRTYPLNSAFVPTYNMAVNLVG-SMGREK 487

Query: 526 AEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE------YHKLKLDIA 579
           A  ++++SF QFQ ++ L   G    +  +  A ++A  +A   E      Y +L+ +I 
Sbjct: 488 ARDLLEHSFAQFQIDRRL---GGSAVRNRQTQADIEAYLKAAHCERGDFTVYARLRENIR 544

Query: 580 QL--EKKLMSEITRPERV---LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +L  E+  + +   P +V   L  L  G +I V   G    W VVV+         GT  
Sbjct: 545 ELEHEQARLRKGELPSQVADSLSSLDPGDIIAV-PSGRHARWVVVVD--------PGTHG 595

Query: 635 SRGGGYIVPVQLPLISTLSKIRLS---------------VPPDLRPLDARQSILLAVQEL 679
           +RG     P  L +    + IRL                VP    P +  Q+    + + 
Sbjct: 596 ARGQ---RPRPLVMTPDRTVIRLGHQDIDAPVTRVAGVKVPRHFHPEN--QADRRCLGKA 650

Query: 680 ESRFPQGL--PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQR 736
             R  +GL  P + P +     D E+ D   QI EL  ++ AHP +   D E+  R  +R
Sbjct: 651 FDRVLEGLGRPVVKPRR--AAVDAELSD---QIAELRSQMKAHPCHSCLDRESHARFAER 705

Query: 737 KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADG-VVQLKGRAACLIDTG 795
              +    ++  +K R ++      + +    VL+ LG++   G  V   GR    I + 
Sbjct: 706 AMRLRRRSERELTKAR-AKATSIATQFERIVLVLEALGYLGTGGDTVTDAGRMLSGIYSE 764

Query: 796 DELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIA 855
            +L+  E +  G F+ LD  Q+AA+ S  +   +  ++ +        L ++ +   + A
Sbjct: 765 LDLVTAEAIRRGVFDGLDCPQLAAVLSTIVHESRPGDRGH--------LHRMPDGKSEAA 816

Query: 856 EIQ-NECKLEVNVDEYVESTVRPFLMDV-----IYCWSKGATFAEVIQMTDIFEGSIIRS 909
           E Q    + E+ + E      RP  +D+      Y W+ GA    V+   D+  G  +R 
Sbjct: 817 ESQLRAVRAEIGLLERDHRIERPRDLDIGFAEASYAWAAGAGLDTVLD--DMSAGDFVRR 874

Query: 910 ARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
            R++ +   Q+  A   VGE NL         +++RG++
Sbjct: 875 VRQVCDLAGQI--AHAGVGE-NLAHTCRQVVGAMQRGVV 910


>gi|352095918|ref|ZP_08956865.1| DSH domain protein [Synechococcus sp. WH 8016]
 gi|351677274|gb|EHA60423.1| DSH domain protein [Synechococcus sp. WH 8016]
          Length = 911

 Score =  338 bits (866), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 277/920 (30%), Positives = 445/920 (48%), Gaps = 83/920 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++++ + F LD FQ  S+  L +  SV+VSA T +GKT V EYAI  A    Q+V YT+P
Sbjct: 5   DVSQLFPFPLDGFQLESIDALNQGHSVVVSAPTGSGKTLVGEYAIHRAIAHGQKVFYTTP 64

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE----VLK 181
           LKALSNQK R+  ++F  ++VGLMTGD++++  A  +VMTTEI R MLY  ++     L 
Sbjct: 65  LKALSNQKLRDFREQFGAENVGLMTGDLSVNREARVVVMTTEIFRNMLYAEADEHDDPLA 124

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           +V  V+ DE HYM D +RG VWEESII  PP++++V LSAT++NA Q  +WI  +H  P 
Sbjct: 125 DVESVVLDECHYMNDSQRGTVWEESIIHCPPSVQLVALSATVANAGQLTDWIEKVHG-PT 183

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
            +V +DFRP PLQ + F     GL+ +++E+      N           K+    +  K 
Sbjct: 184 RLVLSDFRPVPLQ-FSF-CSAKGLHPLLNEQGTGIHPNC----------KVWRAPKGHKR 231

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            GR  +          F + +M  +R+  P I F FSRR C++    +      ++ E+ 
Sbjct: 232 KGRSPRPPQPEAPPISFVVAQM-AQREMLPAIYFIFSRRGCDKAVRDLGVQCLVSEAEQA 290

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +    +       E  R+     L    L RGIA HH+G+LP  KEL+E LFQ+GLVK 
Sbjct: 291 IIRDRLEAYTAANPEAVRD----GLHADALLRGIASHHAGVLPAWKELIEELFQQGLVKV 346

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +FATET A G+NMPA++ V  ++ K     HR + + E++QM+GRAGRRG D +G  + +
Sbjct: 347 VFATETLAAGINMPARSTVIASLSKRTERGHRPLMASEFLQMAGRAGRRGLDTQGYVVTV 406

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
                 +     +      PLVS F  SY  +LNL+ R +    A  +++ SF ++    
Sbjct: 407 QSRFEGVREAAQLATSPSDPLVSQFTPSYGMVLNLLQRHD-LAKARELVERSFGRYLASL 465

Query: 542 ALPDIGKKVSKLEEEAASLDASGE----AEVAEYHKLK-----------LDIAQLEKKLM 586
            L +    +  L  + A L  +       +  EY K +           +   Q E+ L 
Sbjct: 466 DLVEEEDHLGALRMQLAQLQGTAGDVPWEDFEEYEKQRGRVREERRLLRILQQQAEETLA 525

Query: 587 SEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGYI 641
            E+T     L +   G L+ ++        GV   V+ +   G G  P     ++   +I
Sbjct: 526 HELT---IALQFASVGTLVSLK--SPRLRGGVTPAVIVEKCDGPGQFPLLLCLTQDNVWI 580

Query: 642 -VPVQ--LPLISTLSKIRLS--VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
            +P Q  + L + LS +++     PDL    +R   L    +   R    +  +    DM
Sbjct: 581 LLPCQGVVSLHAELSCLQVDGVTSPDL----SRSGELRHGDQDSGRLALAVAHMARRHDM 636

Query: 697 KIED----PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE-VNHEIQQLKSKM 751
                    EV+  V  ++ELE +L  HP ++  D  Q++  +R+ E + HEI++ + ++
Sbjct: 637 TTAQYDLAGEVLSQVRLVKELEDELEEHPAHRWGDRKQLKKHRRRMEDLEHEIRE-REQL 695

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
              +  +  +       +L+  G +DA    ++ GR    +   +EL +   + +G  ++
Sbjct: 696 LHHRSNRHWETFLALIEILRHFGCLDALEPTEI-GRTVAALRGDNELWLGLALMSGHLDE 754

Query: 812 LDHHQVAALASCFIPVDKSSEQINLRMELAKP------LQQLQESARKIAEIQNECKLEV 865
           L     A LA+ F  +     + +L      P      L  L    R++   Q   K+  
Sbjct: 755 LP---PAELAAVFEAISTEVNRPDLWSAFPAPPLAEEALHDLSGIRRELLRAQERFKV-- 809

Query: 866 NVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQ 925
                V +   P LM ++  W+KG T+ ++I  T + EG ++R  RR  + L Q+    +
Sbjct: 810 ----VVPAWWEPELMGLVEAWAKGTTWNDLIANTSLDEGDVVRIMRRTVDLLAQV-PYCE 864

Query: 926 AVGEVNLEKKFAAASESLRR 945
           A+ E  L K   AA  ++ R
Sbjct: 865 AISE-QLRKNARAALTAINR 883


>gi|333919686|ref|YP_004493267.1| putative helicase [Amycolicicoccus subflavus DQS3-9A1]
 gi|333481907|gb|AEF40467.1| Putative helicase [Amycolicicoccus subflavus DQS3-9A1]
          Length = 911

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 273/934 (29%), Positives = 436/934 (46%), Gaps = 96/934 (10%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A    F +DPFQ  +   LE    VLV A T AGKT V E+A+ +A    ++  YT+P+
Sbjct: 14  FAAMLPFPMDPFQVRACDALEGGHGVLVCAPTGAGKTVVGEFAVHLALSSGRKCFYTTPI 73

Query: 129 KALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY +L   +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L+ ++ V
Sbjct: 74  KALSNQKYNDLVARYDRDTVGLLTGDQSINSEAPVVVMTTEVLRNMLYAGSDTLRGLSHV 133

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+H++ DR RG VWEE I+ L   + +V LSAT+SNA +F  W+  + +    V+  
Sbjct: 134 VMDEVHFLADRFRGAVWEEVILHLADDVALVSLSATVSNAEEFGAWMETV-RGDTTVIVD 192

Query: 247 DFRPTPL-QHYV--------FPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI--GGR 295
           + RP PL QH +        FP   +G             D    ++          G  
Sbjct: 193 ETRPVPLWQHMLVGPRLLDLFPSRSTG-----KGSRALNPDLLAHVRKRLAAAGAERGHY 247

Query: 296 RENGKASGRMAKGGSGS-----GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMS 350
           R++ +  GR  +GG+G+     G ++I  I ++  E    P I F FSR  C+       
Sbjct: 248 RQSNRDRGRF-RGGNGARYRPPGRAEI--IARLDGE-GLLPAITFVFSRAGCDAAVGQCV 303

Query: 351 K--LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
           +  L   T+ E   +  +       L   D  +         L+RGIA HH+G+LP  + 
Sbjct: 304 RAGLALTTEAEAKEIRAIITKHTGELPPADLQVLGFSGWCTALERGIAAHHAGMLPAFRH 363

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
            VE LF +GLV+A+FATET A+G+NMPA+TVV  ++ K++GD+H  +  GEY Q++GRAG
Sbjct: 364 TVEELFVKGLVRAVFATETLALGINMPARTVVLESLVKFNGDTHADLTPGEYTQLTGRAG 423

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
           RRG D  G  +++    ++   +  +   +  PL S+F   Y   +NL+ +   +  A  
Sbjct: 424 RRGIDIEGHAVVLWQPGVDPEMVAGLASTRTFPLRSSFAPGYNMAINLLRQRPAE-DARA 482

Query: 529 VIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKL 585
           +++ SF QFQ ++++    + V + E E   L+   +    + AEY +L+  I+Q EK L
Sbjct: 483 LLERSFAQFQTDRSVVGAARTVERNERELERLEGRVDCHLGDFAEYARLRRGISQREKDL 542

Query: 586 MSEITRPERVLYYLGSGRLIKVREG-------GTDWGWGVVVN----------VVKKPSA 628
               T   R      +  L+K+R G       G   G   VV           +V   SA
Sbjct: 543 ERSATAERR---DAAASSLVKLRRGDVIVIPSGRRAGVAAVVEPDREFDDPRPLVITDSA 599

Query: 629 GVGTLPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
             G +  R   + +PVQ     TL  +RL    D R    R+ +   ++ L    P   P
Sbjct: 600 WAGRVTLR--DFPIPVQ-----TLGAVRLPRHIDFRSAQVRRDLASTLRNLGYTPPHRAP 652

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQL 747
                K     D E       +  +   L AHP +  ++ E   R F+R   +  +  +L
Sbjct: 653 GRKGQKAAAANDKE-------LARMRRTLKAHPCHTCEEREEHARWFERYDRLKADTDRL 705

Query: 748 KSKMR--DSQIQKFRDELKNRSRVLKKLGHID-----ADGVVQLKGRAACLIDTGDELLV 800
           + +M    S + +  D +     +L + G++      AD  V  +G     I +  +LLV
Sbjct: 706 RRQMNLASSSLARTFDRIVT---LLTERGYVSEASDTADSTVTEEGEWLSRIYSESDLLV 762

Query: 801 TELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
            E +  G +  L   ++AA  S  +  +   E +        PL++      +I E    
Sbjct: 763 AEALRRGIWKGLGPAELAATVSAVV-FETRREGVTAGHVPTAPLRRSLADTMRIWE---- 817

Query: 861 CKLEVNVDEYVES--TVR---PFLMDVIYCWSKGATFAE-VIQMTDIFEGSIIRSARRLD 914
              E++ DE      T+R      +   Y W+  A   E ++   +I  G  +R  R+L 
Sbjct: 818 ---EIHSDELRHKLPTMREPDAGFVHAAYLWATEAPLVEALLAANEISAGDFVRWCRQLI 874

Query: 915 EFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           + L+Q+R AA    +  +      A  ++RRG++
Sbjct: 875 DLLDQIRIAAP---DREVRSTAGKAIAAVRRGVV 905


>gi|428221054|ref|YP_007105224.1| superfamily II RNA helicase [Synechococcus sp. PCC 7502]
 gi|427994394|gb|AFY73089.1| superfamily II RNA helicase [Synechococcus sp. PCC 7502]
          Length = 877

 Score =  337 bits (865), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 269/899 (29%), Positives = 442/899 (49%), Gaps = 102/899 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++ K + F+LD FQ  ++A L   +S++V A T +GKT + EYAI  A  D++RV YT+P
Sbjct: 5   DLDKLFPFDLDQFQHEAIAALNARKSIVVCAPTGSGKTLIGEYAIYKALNDQRRVFYTTP 64

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+    F  ++VGL+TGD +++ +A  LVMTTEI R MLY G+ +      
Sbjct: 65  LKALSNQKLRDFRDRFGNENVGLLTGDTSVNRDAPILVMTTEIFRNMLY-GTPIGEVGTS 123

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L  V  V+ DE HYM DR RG VWEESII+ PP I++V LSAT++N+ Q  +WI  +H  
Sbjct: 124 LTGVEVVVLDECHYMNDRARGTVWEESIIYCPPDIQLVALSATVANSAQLTDWISKVHGV 183

Query: 240 PCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN 298
              ++Y+D+RP PLQ H+  P    GL+ ++D   +             +  ++ G   N
Sbjct: 184 -TELIYSDYRPVPLQFHFANP---KGLFPLLDNSGKK------------INPRLRGNPRN 227

Query: 299 GK--ASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNT 356
            K  A+G+  +  S S    +  ++  + +R   P I F FSR+ C+Q    + K+    
Sbjct: 228 LKKDANGKPPRYESPS----LPFVISQLQQRDMLPAIHFIFSRKGCDQAIGQLDKMSLVN 283

Query: 357 QEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQE 416
           + E   ++      ++   E  R+       +  L RGIA HH+G+LP  K LVE LFQ+
Sbjct: 284 ESEAYQLKTQIDAFLEANPEVGRSQ-----YISSLYRGIASHHAGILPAWKGLVEELFQQ 338

Query: 417 GLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRG 476
           GL+K +FATET A G+NMPA+T V +++ K     HR + + E++QM+GRAGRRG D  G
Sbjct: 339 GLIKVVFATETLAAGINMPARTTVISSLSKRTDRGHRLLTASEFLQMAGRAGRRGMDAVG 398

Query: 477 ICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQ 536
             + +            +   +  PLVS F  SY  +LNL+         E +++ SF Q
Sbjct: 399 YVVTVQSPYEGAKDAAYLATAQADPLVSQFTPSYGMVLNLLQTHSIDEVRE-LVERSFGQ 457

Query: 537 F-------QYEKALPDIGKKVSKLEEEAASLD----------ASGEAEVAEYHKLKLDIA 579
           +         ++++ ++  +V  LE + AS+D               E    HK+     
Sbjct: 458 YLAGLAMEPQQESIQELADEVELLETQLASIDLDLLEGYEKLRDRLREERRLHKILFQ-- 515

Query: 580 QLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAG----VGTLPS 635
           Q E++ ++E+      + Y+ +G L+ ++          ++ V K PS+G    +  L  
Sbjct: 516 QSEEQRLNELA---AYIPYVLTGTLLMIKSESIKTPISALL-VAKIPSSGKFPWLVCLSQ 571

Query: 636 RGGGYIVPVQ--LPLISTLSKIRLSVP--------PDLRPLDARQSILLAVQELESRFPQ 685
           R   +++  +    L    S   L  P          L+  D+  +I  ++  LE  FP 
Sbjct: 572 RNNWHVILYKDVFLLGEQWSSSDLVYPELLVLKPGQHLKGDDSTSAIAASIPTLE--FP- 628

Query: 686 GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQ 745
            LP            PEV+    ++ E+E +L  HP++   D + I    RK E   E  
Sbjct: 629 NLP------------PEVLAQQEKVIEVEAQLNEHPVSTWGDRSIIAKKARKLEQLKEKL 676

Query: 746 QLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGV-VQLKGRAACLIDTGDELLVTELM 804
           + +  +   + Q    E  +   +L+  G +   GV     G+ A  +   +EL +    
Sbjct: 677 EYQRGVLSQKQQHHWQEFSSLVTILQSFGCL--QGVEPTAAGQVAASLRGDNELWLALAF 734

Query: 805 FNGTFNDLD-HHQVAALASCFIPVDKSSEQINLRME--LAKPLQQLQESARKIAEIQNEC 861
            +G  ++LD HH   A A+      +   ++N  +   + + L  L+   R++ +IQ   
Sbjct: 735 LSGELDNLDPHHLATACAALVTENSRPDSRVNFTISPLVEESLSGLRGLRRQLFQIQKRH 794

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
            + + +  ++E      L+ +I  W+ G ++ E+   T + EG I+R ARR  + L+Q+
Sbjct: 795 NVAIPI--WLEYD----LVGLIEQWALGMSWTELCANTSLDEGDIVRIARRTLDLLSQI 847


>gi|381397258|ref|ZP_09922671.1| DEAD/DEAH box helicase domain protein [Microbacterium
           laevaniformans OR221]
 gi|380775575|gb|EIC08866.1| DEAD/DEAH box helicase domain protein [Microbacterium
           laevaniformans OR221]
          Length = 826

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/555 (36%), Positives = 306/555 (55%), Gaps = 34/555 (6%)

Query: 61  ANPVYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK- 119
           A+P+     A    F+LDPFQ      LE   SVLV+A T AGKT V E+A+ +A R+  
Sbjct: 16  AHPI-TASFADGQRFDLDPFQIAGCHALEDGRSVLVAAPTGAGKTIVGEFAVHLAMREPG 74

Query: 120 QRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS 177
           ++  YT+P+KALSNQK+REL Q +   +VGL+TGD  ++ NA  +VMTTE+LR MLY  S
Sbjct: 75  EKAFYTTPMKALSNQKFRELQQVYGEDEVGLLTGDTNINGNARVVVMTTEVLRNMLYADS 134

Query: 178 EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH 237
             L+ + +V+ DE+HY+ DR RG VWEE II LPP +K+V LSAT+SNA +F +W+  + 
Sbjct: 135 PALRGLRYVVMDEVHYLADRFRGAVWEEVIIHLPPRVKLVSLSATVSNAEEFGDWLDTVR 194

Query: 238 KQPCHVVYTDFRPTPLQHYVFPVG----------GSGLYLVVDEKEQFREDNFVKLQDTF 287
                V+ ++ RP PL+ +V   G          G     V  E  + R       +   
Sbjct: 195 GDTA-VIVSETRPVPLEQHVLVRGDLLPLFDDRAGIATAQVNQELMRLRSVRGSTFESNR 253

Query: 288 LKQKIGGRRENGKA----SGRMAKGGSGSGGS---------DIFKIVKMIMERKFQPVIV 334
             Q     R   +A    + R  KG +    S         D  ++V+++      P I 
Sbjct: 254 RAQDYRSHRHRAQADRSGAARPPKGVTRPLRSANMQRIERIDRPQVVELLARANLLPAIF 313

Query: 335 FSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLK 392
           F FSR  CE     +  S +    ++E+D + ++       L +ED  +         L+
Sbjct: 314 FIFSRAGCEGAVQQVRRSGVRLTDRDERDEIRRIVDERTLTLPDEDLAVLGFWEWRENLE 373

Query: 393 RGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSH 452
           RG+A HH+GLLP  KE+VE LFQ  LVK +FATET A+G+NMPA+TVV   ++K++G++ 
Sbjct: 374 RGVAAHHAGLLPAFKEIVEELFQRKLVKVVFATETLALGINMPARTVVLEKLEKFNGEAR 433

Query: 453 RYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYS 512
             I SGEY Q++GRAGRRG D  G  +I   E ++   +  +   +  PL S+FR +Y  
Sbjct: 434 VAITSGEYTQLTGRAGRRGIDVEGHAVIQWSENLDPQAVAALASRRTYPLNSSFRPTYNM 493

Query: 513 ILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDAS---GEAEVA 569
            +NL+ +  G+  A  ++++SF QFQ ++A+  + ++V   E   A   AS      + A
Sbjct: 494 AVNLIDQF-GRARAREILESSFAQFQADRAVVGLAREVKDAEVSLAGYAASMACDRGDFA 552

Query: 570 EYHKLKLDIAQLEKK 584
           E+ +++ ++  LE+K
Sbjct: 553 EFARMRRELGDLERK 567



 Score = 57.4 bits (137), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 25/256 (9%)

Query: 709 QIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKN 765
            IE L   L  HP     D E   R  +R  ++     +L+ ++  R   + +  D + +
Sbjct: 583 HIESLRRSLKRHPCQSCPDREKHARWAERYGKLRRHTDKLRQQIDTRTGTVARIFDRVVD 642

Query: 766 RSRVLKKLG--HIDADGVVQLKGRAACL--IDTGDELLVTELMFNGTFNDLDHHQVAALA 821
              VL  L   H+DADG   L    A +  I    +LLV E +    + DLD   ++ALA
Sbjct: 643 ---VLTALNYVHVDADGATALTAAGATMKRIYGERDLLVAESLRTRIWKDLDPAGLSALA 699

Query: 822 SCFI--PVDKSS---EQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVR 876
            C +  P    S   E    R      L   QE   ++ +++ + +L  +      S V 
Sbjct: 700 CCLVYEPRRDESGPGEHGLPRGAFRAALTATQELWARLDDLEQDHRLPGS------SPVA 753

Query: 877 PFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKF 936
             L   ++ W++GA+   V+Q  D+  G  +R  ++  + L+QL      V +  L    
Sbjct: 754 TGLAQAMHSWARGASLDRVLQEADLAAGDFVRWTKQTIDLLDQL----SMVADAPLATTA 809

Query: 937 AAASESLRRGIMFSNS 952
            AA +++RRGI+   S
Sbjct: 810 RAALDAVRRGIVAYGS 825


>gi|386387443|ref|ZP_10072459.1| DSH domain-containing protein [Streptomyces tsukubaensis NRRL18488]
 gi|385665093|gb|EIF88820.1| DSH domain-containing protein [Streptomyces tsukubaensis NRRL18488]
          Length = 945

 Score =  337 bits (865), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 280/932 (30%), Positives = 451/932 (48%), Gaps = 73/932 (7%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F+LDPFQ  +   LE    VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 35  YEFDLDPFQIDACRALEAGRGVLVAAPTGSGKTIVGEFAVHLALQQGRKCFYTTPIKALS 94

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++  A  +VMTTE+LR MLY GS+ L+ + +V+ DE
Sbjct: 95  NQKYADLVKRYGADKVGLLTGDNSVNSEAPVVVMTTEVLRNMLYAGSQSLRGLGYVVMDE 154

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  +      V+ ++ RP
Sbjct: 155 VHYLSDRFRGAVWEEVIIHLPDSVTLVSLSATVSNAEEFGDWLDTVRGDTA-VIVSEERP 213

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKLQDTFLKQKIGGR-RENGK 300
            PL  +V  + G  +Y + +E+          RE N   V+L  T  ++    R R  GK
Sbjct: 214 VPLWQHV--MAGRRMYDLFEEESDHGGRGTGRREVNPDLVRLARTENQRSYNPRDRRRGK 271

Query: 301 ASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLD 353
                 +       S I+     ++++ +      P I F FSR  CE        + L 
Sbjct: 272 MVREADRERERRSRSRIWTPGRPEVIERLDAEGLLPAITFIFSRAGCEAAVQQCLYAGLR 331

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
            N    +  V ++ +     +  ED N+      L  L+RGIA HH+G+LP  KE+VE L
Sbjct: 332 LNDDTARLRVREIVEERTSAIPTEDLNVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEEL 391

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D
Sbjct: 392 FVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGID 451

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    M+   L  +   +  PL S+FR SY   +NL+ +  G+  +  +++ S
Sbjct: 452 VEGHAVVLWQRAMDPAALAGLAGTRTYPLRSSFRPSYNMAVNLVEQF-GRHRSRELLETS 510

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEKKLMS 587
           F QFQ ++++  I ++V K E     L+   E       +  EY +L+ ++   E +L  
Sbjct: 511 FAQFQADRSVVGISRQVQKNE---TGLEGYREGMTCHLGDFEEYARLRRELKDRENELAK 567

Query: 588 EITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIV 642
           +     R      L  L  G +I V  G         + +V  P    G      G    
Sbjct: 568 QGAAQRRAAAAVSLEKLKPGDVIHVPTGKF-----AGLALVLDPGIPAGRTNGHRGFEHH 622

Query: 643 PVQLPLISTLSK-----IRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKL------- 690
               PL+ T  +       +  P  + PL+ R  I    +    R PQ    L       
Sbjct: 623 DGPRPLVLTAERQVKRLASMDFPVPVEPLE-RMRI---PKSFNPRSPQSRRDLASALRTK 678

Query: 691 --NPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHEIQQL 747
             + V D   +          I  L  +L AHP +  S+ E+  R  +R   +  + +QL
Sbjct: 679 AGHIVPDRHRKQRSAAADDRDITRLRAELRAHPCHGCSEREDHARWAERYHRLLRDTRQL 738

Query: 748 KSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           + ++  R + I +  D +     +L +L ++ AD V     R A L    D LL +E + 
Sbjct: 739 ERRIEGRTNTIARTFDRIVA---LLTELDYLRADEVTPHGRRLARLYGELD-LLASECLR 794

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQ-INLRMELAKPLQQLQESARKIAEIQN-ECKL 863
           +G +  L   ++AA  S  +   + S+  +  ++        L +  R   ++   E   
Sbjct: 795 DGVWEGLTPAELAACVSALVYESRQSDDAVAPKVPGGAAKTALGQMVRIWGKLDALEEDF 854

Query: 864 EVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           ++N  E V     P L      Y W+   +  EV++ T++  G  +R  +++ + L Q+ 
Sbjct: 855 KINQAEGV-GQREPDLGFAWAAYQWASDKSLDEVLRETEMPAGDFVRWTKQVIDVLGQIA 913

Query: 922 AAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           AAA   G   + K    A +++ RG++  +S+
Sbjct: 914 AAAPREGS-TVAKNARKAVDAVLRGVVAYSSV 944


>gi|322802467|gb|EFZ22809.1| hypothetical protein SINV_13431 [Solenopsis invicta]
          Length = 336

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 173/343 (50%), Positives = 235/343 (68%), Gaps = 10/343 (2%)

Query: 268 VVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGG---SGSGGSDIFKIVKMI 324
           VVDE  QF+EDNF +           G    G   GR  KGG   S SG S+IFK+VKMI
Sbjct: 1   VVDETGQFKEDNFNRAMACLQNM---GDAAKGDTKGR--KGGLRASNSGQSNIFKMVKMI 55

Query: 325 MERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAI 384
           MER F PVI+FSFS+++CE +AM M+KLD NT  EK  V++VF NA+D L++ D+ LP +
Sbjct: 56  MERNFAPVIIFSFSKKDCEVYAMQMTKLDLNTLAEKKLVDEVFNNAIDVLSDADKQLPQV 115

Query: 385 ELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAV 444
             +LPLL+RGI +HH GLLP++KE VE+LF EGL+KALFATETFAMGLNMPA+TV+FTA 
Sbjct: 116 MNLLPLLRRGIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAP 175

Query: 445 KKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVS 504
           +K+DG   R+I SGEYIQMSGRAGRRG DD+GI I+M+DEQ+     K +V GKP P+ S
Sbjct: 176 RKFDGKDFRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPMVGKAIVQGKPDPINS 235

Query: 505 TFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASG 564
            F L+Y  +LNL+ R E     E++++ SF QFQ +  +P +  KV +L     +++   
Sbjct: 236 AFHLTYNMVLNLL-RVE-DINPEYMLERSFFQFQNQAGIPVLYNKVKELCSAYNTVNVDR 293

Query: 565 EAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKV 607
             E++ YH ++  + +L  +  S +T+PE ++ +L  GRL+KV
Sbjct: 294 YDEISSYHDIREQLNRLSAEFQSFLTQPEYLVPFLQPGRLVKV 336


>gi|408676942|ref|YP_006876769.1| putative helicase [Streptomyces venezuelae ATCC 10712]
 gi|328881271|emb|CCA54510.1| putative helicase [Streptomyces venezuelae ATCC 10712]
          Length = 942

 Score =  337 bits (864), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 275/935 (29%), Positives = 453/935 (48%), Gaps = 79/935 (8%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YEFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALTQGRKCFYTTPIKALS 91

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + + +  VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYADLVKRYGNDKVGLLTGDNSVNGDAPIVVMTTEVLRNMLYAGSQALSGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSESRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKLQDTFLKQKIGGR-RENGK 300
            PL  +V  + G  +Y + +E+          RE N   ++L  T   +    R R  GK
Sbjct: 211 VPLWQHV--LAGRRMYDLFEEETDHGGRGASRRELNPDLLRLARTENTRTYNPRDRRRGK 268

Query: 301 ASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLD 353
                 +       S I+     ++++ +      P I F FSR  CE        + L 
Sbjct: 269 MIREADRERERRQRSRIWTPGRPEVIERLDAEGLLPAITFIFSRAGCEAAVQQCLYAGLR 328

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
            N ++ +  V ++ +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE L
Sbjct: 329 LNDEDGRRRVREIVEERTAAIPGEDLHVLGYYEWLEALERGIAAHHAGMLPTFKEVVEEL 388

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D
Sbjct: 389 FVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGID 448

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    ++   L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ S
Sbjct: 449 VEGHAVVLWQRGLDPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVDQF-GRHRSRELLETS 507

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEKKLMS 587
           F QFQ ++++  I ++V K EE    L    E       +  EY +L+ D+   E +L  
Sbjct: 508 FAQFQADRSVVGISRQVQKNEE---GLQGYREGMTCHLGDFEEYARLRRDLKDRETELAR 564

Query: 588 EITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIV 642
           +     R      L  L  G +I V  G         + +V  P    G      G    
Sbjct: 565 QGAAQRRAQAAGSLEKLKPGDVIHVPTGKF-----AGLALVLDPGIPAGRTNGHRGFEHH 619

Query: 643 PVQLPLIST-------LSKI----------RLSVPPDLRPLDARQSILLAVQELESRFPQ 685
               PL+ T       L+ I          R+ +P    P   +       ++L S    
Sbjct: 620 DGPRPLVLTAERQVKRLASIDFPVPVEALERMRIPKSFNPRSPQSR-----RDLASALRS 674

Query: 686 GLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEI 744
               +NP +  K       D   ++  L  ++ AHP +   + E+  R  +R   +  + 
Sbjct: 675 KAGHINPERHRKQRSAAADD--RELARLRTEIRAHPCHGCDEREDHARWAERYHRLQRDT 732

Query: 745 QQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
           QQL+ ++  R + I +  D +     +L +L ++  + V +   R A L    D LL +E
Sbjct: 733 QQLERRIEGRTNTIARTFDRIVA---LLTELDYLRGNEVTENGKRLARLYGELD-LLASE 788

Query: 803 LMFNGTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIAEIQN-E 860
            + +  +  L+  ++AA AS  +    +S + +  ++        L E  R    +   E
Sbjct: 789 CLRDRVWEGLNPAELAACASALVFEARQSDDAVAPKLPTGNAKAALGEMVRIWGRLDALE 848

Query: 861 CKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
            + ++N  E V     P L      Y W+   +  EV++  ++  G  +R  +++ + L 
Sbjct: 849 EEFKINQAEGV-GQREPDLGFAWAAYQWASDKSLDEVLREAEMPAGDFVRWCKQVIDVLG 907

Query: 919 QLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           Q+ AAA       + K    A +SL RG++  +S+
Sbjct: 908 QIAAAAPRENST-VAKNARKAVDSLLRGVVAYSSV 941


>gi|443311900|ref|ZP_21041522.1| superfamily II RNA helicase [Synechocystis sp. PCC 7509]
 gi|442777975|gb|ELR88246.1| superfamily II RNA helicase [Synechocystis sp. PCC 7509]
          Length = 893

 Score =  337 bits (863), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 272/888 (30%), Positives = 445/888 (50%), Gaps = 107/888 (12%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FELD FQ  ++A L  ++SV+V A T +GKT + EYAI  A    +RV YT+PLKALS
Sbjct: 16  FPFELDEFQTSAIAALNADKSVVVCAPTGSGKTLIGEYAIHRALSRGKRVFYTTPLKALS 75

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+  + F    VGL+TGDV+++  A  LVMTTEI R MLY G+ +      ++ V 
Sbjct: 76  NQKLRDFRKVFGADKVGLLTGDVSINREAPILVMTTEIFRNMLY-GTPIGEVGTSMQGVE 134

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESII+ P  I++V LSAT++N+ Q  +WI  +H  P  ++
Sbjct: 135 AVVLDECHYMNDRQRGTVWEESIIYCPREIQLVALSATVANSDQLTDWINTVHG-PTQLI 193

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y+DFRP PL+     V G                 F  L+   +  ++  R + G    +
Sbjct: 194 YSDFRPVPLEFKFCNVKGL----------------FPLLEGGKINPRL--RPKRGSIDAQ 235

Query: 305 MAKGGSGSGG----SDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEK 360
            AK    +G       I  ++  +  R   P I F FSRR C++    +  L      E 
Sbjct: 236 KAKDARRNGARPEAPSIIYLLNQLSSRDMLPAIYFIFSRRGCDKAVEDLGTLTLVNPSEA 295

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             ++      +D   + + +   I  + PL  RGIA HH+G+LP  K LVE LFQ+GL+K
Sbjct: 296 AQLKW----QIDEFLQRNPDAGRIGQVQPLY-RGIAAHHAGILPAWKGLVEELFQQGLIK 350

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
            +FATET A G+NMPA+T V +++ K     HR +   E++QM+GRAGRRG D RG    
Sbjct: 351 VVFATETLAAGINMPARTTVISSLSKRTDRGHRLLNGSEFLQMAGRAGRRGMDKRG---Y 407

Query: 481 MVDEQMEMNTLKD---MVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           +V  Q      K+   +   K  PLVS F  +Y  +LNL+     +  A+ +I+ SF Q+
Sbjct: 408 VVTAQTPFEGAKEAAYLATAKADPLVSQFTPTYGMVLNLLQTHTLE-QAKELIERSFGQY 466

Query: 538 --------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDI---AQLEKKLM 586
                   QYE A+  +  ++++++E+ AS+D    A++  Y KL+  +    QL K L+
Sbjct: 467 IANLYLKPQYE-AIALVQAQLAQVQEQLASVDP---AQLQNYEKLRQRLKVETQLLKTLV 522

Query: 587 SEIT--RPERV---LYYLGSGRLIKVREGGTDWGWGV---VVNVVKKPSAG----VGTLP 634
            + T  R E++   + +  +G L+ ++  G +    V    V V K P AG    +  L 
Sbjct: 523 EQATDDRVEQLSLTISFAMTGTLLSLK--GKNVATSVPLTAVLVAKTPGAGQAPYLVCLG 580

Query: 635 SRGGGYIVPV--------QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQG 686
           +    Y+V          +LP +   S +   +PP   P+   QS         ++  Q 
Sbjct: 581 ANNRWYVVTTSDVVDLHAELPRLEIQSDL---LPPVEMPIKPGQS------RRGNQESQL 631

Query: 687 LPKLNPVKDMKIED-PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRK---AEVNH 742
           +  L P     I   PEV+    +++ +  ++ AHPL++    N    F+R+    E+  
Sbjct: 632 IADLIPNSQAIIHTAPEVLAQQQRVQAVSAQIEAHPLHELG--NPATLFKRRNKAMEIEA 689

Query: 743 EIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
           EI   ++++  +  Q+  +E  +   +L++ G +       L G+ A  I   +EL +  
Sbjct: 690 EIATRQAELEKTS-QRHWEEFLHLIEILQRFGCLQDLEPTDL-GQVAAAIRGDNELWIGL 747

Query: 803 LMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
            + +G F++LD   +AA  +  +   P   +  +  L + + + L  L+ + R + ++Q 
Sbjct: 748 ALASGEFDELDPQCLAAAIAAIVTETPRPDTWVRYTLPIPVEEALAGLRSTRRNLFQLQR 807

Query: 860 ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
              + + +  ++E      L+ ++  W+ G  + E+   T + EG ++
Sbjct: 808 RYNITLPI--WLEYD----LVALLEQWALGVDWVELCSHTSLDEGDVV 849


>gi|297195384|ref|ZP_06912782.1| ATP-dependent RNA helicase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197719246|gb|EDY63154.1| ATP-dependent RNA helicase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 942

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 277/931 (29%), Positives = 447/931 (48%), Gaps = 71/931 (7%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y FELDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFELDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALEQGRKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +  + VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYSDLVKRYGAEKVGLLTGDNSVNSGAPVVVMTTEVLRNMLYAGSQSLMGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQF-------REDN--FVKLQDTFLKQKIGGR-RENGK 300
            PL  +V    G  +Y + +E+          RE N   V+L      +    R R  GK
Sbjct: 211 VPLWQHVL--AGRRMYDLFEEETDHGGRGVARREVNPDLVRLARMENSRTYNPRDRRRGK 268

Query: 301 ASGRMAKGGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLD 353
                 +       S I+     +++  +      P I F FSR  CE        + L 
Sbjct: 269 MVREADRERERRQRSRIWTPARSEVIDRLDAEGLLPAITFIFSRAGCEAAVQQCLYAGLR 328

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
            N ++ +  V ++ ++    +  ED ++      L  L+RGIA HH+G+LP  KE+VE L
Sbjct: 329 LNDEDARREVREIVEDRTASIPGEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEEL 388

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D
Sbjct: 389 FVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGID 448

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    M+   L  +   +  PL S+F+ SY   +NL  +  G+  +  +++ S
Sbjct: 449 VEGHAVVLWQRAMDPEALAGLAGTRTYPLRSSFKPSYNMAVNLTQQF-GRHRSRELLETS 507

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEKKLMS 587
           F QFQ +K++  I ++V + EE    L+   E       +  EY +L+ D+   E +L  
Sbjct: 508 FAQFQADKSVVGISRQVQRNEE---GLEGYREGMTCHLGDFTEYARLRRDLKDRETELAK 564

Query: 588 E-----ITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG--GY 640
           +            L  L  G +I V  G         + +V  P    G      G   +
Sbjct: 565 QGAAQRRAAAATSLEKLKPGDVIHVPTGKF-----AGLALVLDPGLPAGRTNGHRGLEHH 619

Query: 641 IVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN--------- 691
             P  L L S     RL+      P++A + + +  +    R PQ    L          
Sbjct: 620 DGPRPLVLTSERQVKRLASIDFPVPVEALERMRIP-KSFNPRSPQSRRDLASALRTKAGH 678

Query: 692 --PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLK 748
             P +  K       D   +I  L  +L AHP +   + E+  R  +R   +  + +QL+
Sbjct: 679 IVPERHGKRRSAAADD--REISRLRAQLRAHPCHGCDEREDHARWAERYFRLQRDTRQLE 736

Query: 749 SKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFN 806
            ++  R + I +  D +     +L ++ ++  D V +   R A L    D LL +E +  
Sbjct: 737 RRIEGRTNTIARTFDRIVA---LLTEMDYLRGDEVTEDGKRLARLYGELD-LLASECLRE 792

Query: 807 GTFNDLDHHQVAALASCFI-PVDKSSEQINLRMELAKPLQQLQESARKIAEIQN-ECKLE 864
           G +  L+  ++AA  S  +    +S + +  ++   K    L E  R    +   E +  
Sbjct: 793 GVWEGLNPAELAACVSALVYEARQSDDAVAPKVPAGKAKVALAEMVRIWGRLDALEEEFR 852

Query: 865 VNVDEYVESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRA 922
           +N  E V     P L      + W+      EV+    +  G  +R  +++ + L Q+ A
Sbjct: 853 INQAEGV-GQREPDLGFAWAAHQWASDKGLDEVLGEVGMPAGDFVRWCKQVIDVLGQIAA 911

Query: 923 AAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           AA       + K    A ++L RG++  +S+
Sbjct: 912 AAPRENS-TVSKNARKAVDALLRGVVAYSSV 941


>gi|456385877|gb|EMF51430.1| helY protein [Streptomyces bottropensis ATCC 25435]
          Length = 949

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 271/919 (29%), Positives = 442/919 (48%), Gaps = 55/919 (5%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 47  YDFGLDPFQIEACQSLESGKGVLVAAPTGSGKTIVGEFAVHLALEQGKKCFYTTPIKALS 106

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + +V+ DE
Sbjct: 107 NQKYSDLCRRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSRTLLGLGYVVMDE 166

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 167 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTDVIVSEHRP 225

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V    G  +Y + +E E  ++    +  ++      +     R  G++     +
Sbjct: 226 VPLFQHVL--AGRRMYDLFEEGEGNKKAVNPDLTRMARMEASRPSYQDRRRGRSMREADR 283

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  S I+     ++++ +      P I F FSR  CE        + L  N  E +
Sbjct: 284 ERERRQRSRIWIPSRPEVIERLDSEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDESR 343

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
             V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 344 LKVRALVEERTASIPNEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 403

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 404 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 463

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +    M  + L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 464 LWQRGMNPDHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 522

Query: 541 KALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER--- 594
           K++  I ++V + EE       S    +    EY +L+ ++   E  L  +     R   
Sbjct: 523 KSVVGISRQVQRNEEGLEGYQESMTCHLGDFEEYARLRRELKDRETDLAKQGVAQRRAEA 582

Query: 595 --VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG--GYIVPVQLPLIS 650
              L  L  G +I V  G         + +V  P    G      G   +  P  L L +
Sbjct: 583 AVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFEQHDGPRPLVLTA 637

Query: 651 TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNP---------VKDMKIEDP 701
                RL+      P++A + + +  +    R PQ    L           V D   +  
Sbjct: 638 ERQVKRLASMDFPVPVEALERMRIP-KSFNPRSPQSRRDLASALRTKAGHLVPDRHRKRR 696

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQK 758
                  +I  L  +L AHP +   D E+  R  +R   +  +  QL+ ++  R + I +
Sbjct: 697 AAAADDREITRLRAELRAHPCHGCSDREDHARWAERYYRLKRDTAQLERRIEGRTNTIAR 756

Query: 759 FRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
             D +     +L +L ++ AD V +   R A L    D LL +E +  G +  L   ++A
Sbjct: 757 TFDRIVA---LLTELDYLRADEVTEHGKRLARLYGELD-LLASECLRAGVWEGLGPAELA 812

Query: 819 ALASCFIPVDKSSEQ-INLRMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYVESTVR 876
           A  S  +   ++++  +  ++        L E  R    +   E +  +   E V     
Sbjct: 813 ACVSALVYEARAADDAMAPKLPSGNAKAALGEMVRIWGRLDALEEEFRITQSEGV-GQRE 871

Query: 877 PFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEK 934
           P L      Y W+ G+   EV++  ++  G  +R  +++ + L Q+ AAA +   V   K
Sbjct: 872 PDLGFAWAAYMWASGSGLDEVLREVEMPAGDFVRWCKQVIDVLGQISAAAPSGSSVG--K 929

Query: 935 KFAAASESLRRGIMFSNSL 953
               A + L RG++  +S+
Sbjct: 930 NARKAVDGLLRGVVAYSSV 948


>gi|213965568|ref|ZP_03393762.1| dead/deah box helicase [Corynebacterium amycolatum SK46]
 gi|213951727|gb|EEB63115.1| dead/deah box helicase [Corynebacterium amycolatum SK46]
          Length = 928

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 270/963 (28%), Positives = 460/963 (47%), Gaps = 116/963 (12%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G+      F+LD FQ  +   +E    V+V A T AGKT V E+AI  A     +  YT+
Sbjct: 5   GDFVSQQDFDLDDFQLRACQSIEAGRGVVVCAPTGAGKTIVGEFAIYAALERGGKCFYTT 64

Query: 127 PLKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQKY +L +++ +  VGL+TGD +++ +A  +VMTTE+LR M+Y  S  LK++ 
Sbjct: 65  PIKALSNQKYHDLVEDYGEDRVGLLTGDTSINGDADIVVMTTEVLRNMIYANSPTLKKLT 124

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DEIHY+ DRERG VWEE I+ L  ++ ++ LSAT+SN+ +F  W+  +      V+
Sbjct: 125 HVVMDEIHYLADRERGAVWEEVILNLDQSVAVIGLSATVSNSEEFGRWLSTVRGH-TDVI 183

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEK-EQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
            TD RP PL  ++    G+ LY + + K ++  +D     +         G RE  +   
Sbjct: 184 VTDLRPVPLHQHMLV--GNRLYPLFEAKSDKVNQDLLEACRRAEFGYGDAGARERYQYKK 241

Query: 304 RMAKGGS---GSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQH--AMSMSKL 352
               G S   G  G   F+      +++M+      P IVF FSR  CE     +  ++ 
Sbjct: 242 HKGGGRSYSWGDKGQRKFRPPKRGDVIRMLGAMNMLPAIVFIFSRAGCEGALAQVGATRA 301

Query: 353 DFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVEL 412
           +   ++E++ + ++  + V  + +ED  +        +L RG A HH+G+LP  + +VE 
Sbjct: 302 ELTDRDEQERIAKIIDDGVAHIPKEDLQVLGFLRWRRILIRGFAAHHAGMLPAFRHIVEE 361

Query: 413 LFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGK 472
           LF EGLVK +FATET A+G+NMPA+TVV   + K++G++H  +  G+Y QM+GRAGRRG 
Sbjct: 362 LFNEGLVKVVFATETLALGINMPARTVVLEKLVKFNGEAHVDLTPGQYTQMTGRAGRRGI 421

Query: 473 DDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN 532
           D  G  ++     M+   +  +   +  PL+STF  SY   +NL+ +  G   ++ V++ 
Sbjct: 422 DTVGNAVVQWAPAMDPKAVAGLASTRTYPLISTFAPSYNMSVNLL-QTLGYEGSKRVMER 480

Query: 533 SFHQFQYEKALPDIGKKVSKLEEEAASL------------------------------DA 562
           SF QFQ +  +  +  ++SK ++EAA+L                              D 
Sbjct: 481 SFAQFQADGDIVGVAAELSKAKQEAAALRAELLGRGADAHAEGAEAEASSSSREGSSRDD 540

Query: 563 SGEAEVAEYHKLKLDIAQLEK-----KLMSEITRPERVLYYLGSGRLIKVREGGTDWGWG 617
               ++ EY  L+  + Q EK      +    T     L  L  G +I + +G       
Sbjct: 541 ERLTQMLEYLDLRAKLTQEEKNAKRRNIEDRHTETVTALRRLRRGEVIPLPKGKK----- 595

Query: 618 VVVNVVKK-------PSAGVGTLPSRGGGYIVPVQLPLI-----STLSKIRLSVPPDLRP 665
           V + VV +       P  GV ++    GG++  V+ P I      T+  I+L    D  P
Sbjct: 596 VQLAVVYREDHSKSNPRPGVISV----GGFVGRVE-PHIFPAAPQTVGSIKLPRDADRHP 650

Query: 666 LDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS 725
              R+++ +   E+  +  +G  +L   +      P V  L  ++   EH L   P  ++
Sbjct: 651 ---RRALGIVRAEIGRKGLKGPKRLK--RRTGGNSPAVRKLRQELR--EHPLHGDPAVET 703

Query: 726 QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID-------A 778
              +     Q +A V  ++Q+      D+  + F        R+L+ L  +D       A
Sbjct: 704 MARHADTLRQAEAHVA-KLQKRVDSASDTLARTF-------DRMLQLLTQMDYVEWLEGA 755

Query: 779 DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRM 838
           +  +  +G     I  G +LLV   +  G ++DLD  ++A   S  +  ++ + Q +  +
Sbjct: 756 EPTITEEGLRLAQIHNGSDLLVATCLRRGIWDDLDPAELAGAVSSLVFENRKASQGSDEV 815

Query: 839 ---ELAKPLQQLQESARKIAEIQNECKLEV-NVDEYVESTVRPFLMDVIYCWSKGATFAE 894
               LAK L        +++E +   +L V ++ +   +T        I+ W+ GA    
Sbjct: 816 PTEPLAKALGNTYRIWEELSEDERRYRLPVTDLPDMAFAT-------AIHQWTAGAPLGY 868

Query: 895 VIQM-----TDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMF 949
            +Q       ++  G  +R  R++ + L Q++    +    ++  K A A +++RRG++ 
Sbjct: 869 CLQAAAESGAELTPGDFVRWCRQVIDLLQQIKKTGYS---TDIRDKSAEAIQAIRRGVVA 925

Query: 950 SNS 952
            N+
Sbjct: 926 LNN 928


>gi|282897088|ref|ZP_06305090.1| Type III restriction enzyme, res subunit [Raphidiopsis brookii D9]
 gi|281197740|gb|EFA72634.1| Type III restriction enzyme, res subunit [Raphidiopsis brookii D9]
          Length = 932

 Score =  337 bits (863), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 269/890 (30%), Positives = 446/890 (50%), Gaps = 104/890 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQ  ++A L    SV+V A T +GKT + EYAI  A    +RV YT+P
Sbjct: 53  DLQSIFPFELDQFQLDAIASLNGGRSVVVCAPTGSGKTLIGEYAIYRALSQGKRVFYTTP 112

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+  ++F  + VGL+TGD +++  A  +VMTTEI R MLY G+ +      
Sbjct: 113 LKALSNQKLRDFREKFGFEQVGLLTGDASVNREAPIIVMTTEIFRNMLY-GTPIGQIGVS 171

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L  V  V+ DE HYM D++RG VWEESII+ P  +++V LSAT+ N+ Q  +W+  +H  
Sbjct: 172 LTNVEAVVLDECHYMNDQQRGTVWEESIIYCPQEVQLVALSATVDNSDQLTDWLNRVHG- 230

Query: 240 PCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN 298
           P  ++Y+DFRP PL+ H+  P    GL+ +++E          K+    +K+   G  E 
Sbjct: 231 PTDLIYSDFRPVPLEFHFCNP---KGLFPLLNESR-------TKINSRLIKRGKKGIGER 280

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
           G         G+      I   +  + +R   P I F FSRR C++    +S L     E
Sbjct: 281 GY--------GNRPEPPTIVYTLSQLSQRDMLPAIFFIFSRRGCDKAVSEVSDLWLVNNE 332

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E     Q+ +  +D     +        + PL K GIA HH+G+LP  K LVE LFQ+GL
Sbjct: 333 ES----QILRVQIDEFLTRNPEAGRSGQIAPLYK-GIAAHHAGILPAWKLLVEELFQQGL 387

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           +K +FATET A G+NMPA+T V + + K   + HR + + E++QMSGRAGRRG D +G  
Sbjct: 388 IKVVFATETLAAGINMPARTTVISTLSKRTDNGHRLLKASEFLQMSGRAGRRGMDRQG-H 446

Query: 479 IIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           ++ +    E       +   PA PLVS F  SY  +LNL+     +  A+ +I+ SF Q+
Sbjct: 447 VVTLQTPFEGAREAAYLATSPADPLVSQFTPSYGMVLNLLQTHTLE-QAKELIERSFGQY 505

Query: 538 --------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKL---M 586
                   +Y++ + +I  +++K+EEE + +D   E E+  Y KLK  I ++E  +   +
Sbjct: 506 MATLYLKPEYDE-IEEIKAELTKIEEELSVID---ENEITLYEKLK-QILKVELHIFRTL 560

Query: 587 SEITRPER------VLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-----PSAGVGTLPS 635
            E  R ER      +L +   G L+ +R+  T     +   +  K     PS+ +  L  
Sbjct: 561 QEQLREERESELYMMLEFAVKGTLVSLRDKNTTATLPITAILYSKVPDTGPSSYLICLGK 620

Query: 636 RGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKD 695
               Y         S  S   L V   +  ++  +SI   +  +E    +G       + 
Sbjct: 621 NNRWY---------SATSSDILEVHAHISRVEVLESI---IPPIELGLKKGYSWRGDAQT 668

Query: 696 MKIED------------PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA---EV 740
            +I D            PE+ + ++++  ++ ++  +P+++S     I  F++KA   E+
Sbjct: 669 AEIADIIPDATEFLYMTPELANQLSRVVSIQSQMENNPVHQSGKIGHI--FKQKAKFLEL 726

Query: 741 NHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLV 800
              ++ L+ +++ +  Q + ++  N  R+L+    +D + V    G+ A  I   +EL +
Sbjct: 727 KSYLEGLEKQVKQNSEQHW-EQFLNLIRILQHFDALD-NLVPTYLGQMAATIRGENELWL 784

Query: 801 TELMFNGTFNDLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEI 857
              + +G  ++LD H +AA  +  +   P   S    +L  E+   L  L+   RK+ +I
Sbjct: 785 GLAIDSGELDNLDPHHLAAAIAALVTETPRPDSRVSFDLSDEVGSALSNLRNIRRKLFQI 844

Query: 858 QNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
           Q+   + + +    E      L+ ++  W+ G  + ++  MT + EG ++
Sbjct: 845 QHRYHVALPIWLEFE------LIAIVEQWALGTKWLQICAMTTLDEGDVV 888


>gi|325676819|ref|ZP_08156492.1| DEAD/DEAH box family ATP-dependent RNA helicase [Rhodococcus equi
           ATCC 33707]
 gi|325552367|gb|EGD22056.1| DEAD/DEAH box family ATP-dependent RNA helicase [Rhodococcus equi
           ATCC 33707]
          Length = 898

 Score =  336 bits (862), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 268/897 (29%), Positives = 431/897 (48%), Gaps = 85/897 (9%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SF LDPFQ  + A LE    VLV A T AGKT V E+A+ +A    ++  YT+P+KALSN
Sbjct: 15  SFPLDPFQLEACAALEAGHGVLVCAPTGAGKTVVGEFAVHLALESGRKCFYTTPIKALSN 74

Query: 134 QKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QK+ EL   +    VGL+TGD +++ +A  +VMTTE+LR MLY  S  L+ ++ V+ DE+
Sbjct: 75  QKFNELSARYGSGAVGLLTGDTSINSDAPVVVMTTEVLRNMLYADSPTLRGLSHVVMDEV 134

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F  W+  + +    +V  + RP 
Sbjct: 135 HYLADRFRGAVWEEVILHLPEDVRLVSLSATVSNAEEFGAWMETV-RGDTTIVVDETRPI 193

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL---KQKIGGRRENGKASGRMAKG 308
           PL  ++    G  L+ + D K      + V +    +   KQ++   R N          
Sbjct: 194 PLSQHILV--GRRLFDLFDAKAAAGASHQVVVDPDLVRHVKQRLALDRMNS-----WEPR 246

Query: 309 GSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEK 360
           G G   S+ F+      ++  + E    P I F FSR  CE        SKL   T E+ 
Sbjct: 247 GRGGYRSNDFRPLPRPEVIARLDEEGLLPAITFIFSRAGCEAALAQCVRSKLRLTTPEQT 306

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELML-------PLLKRGIAVHHSGLLPVIKELVELL 413
             + ++       ++E  R+LP  +L +         L+RG A HH+G+LP  KE VE L
Sbjct: 307 ARIREI-------IDEHTRHLPRPDLEVLGYWSWREALERGFAAHHAGMLPAFKETVEEL 359

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLV+A+FATET A+G+NMPA++VV   + K++GD+H  +  GEY Q++GRAGRRG D
Sbjct: 360 FVNGLVRAVFATETLALGINMPARSVVLERLVKYNGDTHAELTPGEYTQLTGRAGRRGID 419

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    +E   +  +   +  PL S+FR  Y   +NL+ R  G   +  +++ S
Sbjct: 420 VEGHAVVLWQPGVEPTDVAGLASTRTFPLRSSFRPGYNMSINLVDRM-GAVESRALLERS 478

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLD-----ASGEAEVAEYHKLKLDIAQLEKKLMSE 588
           F QFQ ++++  + + + +   EAA  D        + E  EY +++  +   E+ L  +
Sbjct: 479 FAQFQADRSVVGLTRSIER--NEAALTDLRDKLGGADGEYFEYFRIREQLRSRERMLERQ 536

Query: 589 ITRPERVLYYLGSGRLIKVREG-------GTDWGWGVVVNVVKKPS--AGVGTLPSRGGG 639
             R +R    + S  L+ +R G       G   G  VV+   + P+    +     +  G
Sbjct: 537 -GRADRRGASVSS--LVDLRRGDVVAIPVGKRSGLAVVLEPDQNPNDPRPLVLTEDKWAG 593

Query: 640 YIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI 698
            +     P+ + +L K+RL    D R    R+ +  A++      P   PK         
Sbjct: 594 RVSAADFPVPARSLGKLRLPRHVDHRTARVRRDLASALRS-TGIVPPRRPKRGKAGR--- 649

Query: 699 EDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQL--KSKMRDSQ 755
           ED EVV L   + +       HP +   D  Q+ R  +R   +  E + L  KS    + 
Sbjct: 650 EDSEVVALRKALRD-------HPCHSRPDREQLSRIGERYNRLARETESLRQKSAATTNS 702

Query: 756 IQKFRDELKNRSRVLKKLGHIDA--DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           + +  D +     +L + G I A  D     +G+    I +  +LLV E +  G +  L 
Sbjct: 703 LARTFDRIVA---LLTERGFISAGPDPKATEEGQRLARIYSESDLLVAECLRRGAWKGLT 759

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ-NECKLEVNVDEYVE 872
             ++A + S  +   +       R   A   Q L E+ R    +Q +E + ++ V    +
Sbjct: 760 PAELAGVVSSVVYESRQDADAPDRGPTAPLRQALAETMRVWGSLQADEIRHKLPVTREPD 819

Query: 873 STVRPFLMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAA 924
           S      +  IY W+      +V+        ++  G  +R  R++ + L+Q+ A A
Sbjct: 820 SG----FVTAIYQWANDEPLVDVLVAAGSGGKELAAGDFVRWCRQVIDLLDQVHATA 872


>gi|428206722|ref|YP_007091075.1| DSH domain-containing protein [Chroococcidiopsis thermalis PCC
           7203]
 gi|428008643|gb|AFY87206.1| DSH domain protein [Chroococcidiopsis thermalis PCC 7203]
          Length = 889

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 271/880 (30%), Positives = 434/880 (49%), Gaps = 97/880 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           + FELD FQR ++A L  N SV+V A T +GKT + EYAI  A    +RV YT+PLKALS
Sbjct: 16  FPFELDEFQRQAIAALNANRSVVVCAPTGSGKTLIGEYAIYRALSRSKRVFYTTPLKALS 75

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------LKEVA 184
           NQK R+    F    VGL+TGDV+++ +A  LVMTTEI R MLY G+ +      L+ V 
Sbjct: 76  NQKLRDFRDRFGADLVGLLTGDVSINRDAPILVMTTEIFRNMLY-GTPIGEVGTSLEGVE 134

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
            V+ DE HYM DR+RG VWEESII+ PP I++V LSAT++N+ Q  +WIC +H  P  ++
Sbjct: 135 AVVLDECHYMNDRQRGTVWEESIIYCPPDIQLVALSATIANSDQLTDWICRVHG-PTELI 193

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGR 304
           Y++FRP PL+ Y       G++ ++D K                  KI  R    K S  
Sbjct: 194 YSEFRPVPLEFYFG--NPKGIFPLLDPK----------------TGKINPRLRPKKGSSD 235

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVE 364
             K G       +   V  +  R   P I F FSRR C++    ++ +     EE   + 
Sbjct: 236 R-KQGPRPETPKLIDTVGHLYSRDMLPAIYFIFSRRGCDKAVEELAGVTLVNLEEAAQL- 293

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
              +  +D     + +   +  + PL  RGIA HH+G+LP  K LVE LFQ+GL+K +FA
Sbjct: 294 ---KIQIDEFLRRNPDAGRVGQVEPLY-RGIAAHHAGILPAWKGLVEELFQQGLIKVVFA 349

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A G+NMPA+T V + + K     HR +   E++QM+GRAGRRG D  G  + +   
Sbjct: 350 TETLAAGINMPARTTVISTLSKRTDRGHRLLNPSEFLQMAGRAGRRGMDKLGHVVTL--- 406

Query: 485 QMEMNTLKDMVL---GKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF---- 537
           Q      K+ V     KP PL+S F  SY  +LNL+ +      A+ +I+ SF Q+    
Sbjct: 407 QTPFEGAKEAVYLATAKPDPLMSQFAPSYGMVLNLL-QIHNLAEAKELIERSFGQYLATL 465

Query: 538 ----QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIA---QL-----EKKL 585
               QY+ A+ ++  +++ L+ +  S+D   E  +  Y KL+  +    QL     E+ L
Sbjct: 466 YLKPQYD-AIAEMEDRLADLQTQMQSVD---EDRLNHYEKLRQRLKVERQLLKVLEEQAL 521

Query: 586 MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP-----SRGGGY 640
            + I +    + +  SG L+ +R         +   +V K   G G  P      R   +
Sbjct: 522 EARIEQLSLTINFAMSGTLLSLRGKHVQTSTPIPAVLVAK-IPGSGQAPYFICLGRDNRW 580

Query: 641 IVPVQLPLISTLSKI-RLSVPPD--------LRPLDARQSILLAVQELESRFPQGLPKLN 691
            V     +    ++  RL +P          L+P  AR+       E  +     +P L 
Sbjct: 581 YVAASSDIADLFAEFARLDIPEHLMPPVEMPLKPGQARKG-----NEETATIAAQIPDLP 635

Query: 692 PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSK 750
           P        PEV++  +++  ++ +L AHPL+   +   I +   R A++  EI++ +++
Sbjct: 636 PWHAA----PEVLEQQHRVIAVQEQLTAHPLHHLGNPASILKRKTRIAQLQTEIEERQAE 691

Query: 751 MRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFN 810
           + +    +  +E  +   +L++ G +D      L G+ A  +   +EL +   + +G  +
Sbjct: 692 L-ERYAHRHWEEFLHLMEILQRFGALDDLTPTNL-GKVAAAVRGDNELWLGLALASGELD 749

Query: 811 DLDHHQVAALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNV 867
           +L  H +AA  +  +   P   S  +  L  E+   L  ++   R++ ++Q   +  V +
Sbjct: 750 NLAPHHLAAAIAALVTETPRPDSWVRYLLSEEVDIALASIRPIRRQLFQLQR--RYNVTI 807

Query: 868 DEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
             ++E      L+ +I  WS G  + ++   T + EG ++
Sbjct: 808 PIWLEYD----LVALIEQWSLGVEWTDLCANTSLDEGDVV 843


>gi|256376380|ref|YP_003100040.1| DEAD/DEAH box helicase domain-containing protein [Actinosynnema
           mirum DSM 43827]
 gi|255920683|gb|ACU36194.1| DEAD/DEAH box helicase domain protein [Actinosynnema mirum DSM
           43827]
          Length = 996

 Score =  336 bits (861), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 244/761 (32%), Positives = 384/761 (50%), Gaps = 64/761 (8%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SFELDPFQ  +   LE    VLV A T AGKT V E+A+ +A  + ++  YT+P+KALSN
Sbjct: 32  SFELDPFQLRACEFLEDGHGVLVCAPTGAGKTVVGEFAVHLALAEGRKCFYTTPIKALSN 91

Query: 134 QKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QKY +L   +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + +V+ DE+
Sbjct: 92  QKYADLCARYGQDKVGLLTGDTSVNGDAPVVVMTTEVLRNMLYAGSSTLNSLGYVVMDEV 151

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE I+ LP ++++V LSAT+SNA +F EW+  +      VV  + RP 
Sbjct: 152 HYLADRFRGPVWEEVILHLPESVRLVGLSATVSNAEEFGEWLVTVRGDTA-VVVDEHRPV 210

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQ-------KIGGRRENGKASGR 304
           PL  ++   G     L  D+      D  VK+    L+Q        +   R  G   GR
Sbjct: 211 PLWQHML-AGPRMFDLFADDVA----DTHVKINPQLLRQVEDLARFHVPWTRGRGNKGGR 265

Query: 305 MAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSK--LDFNTQEEKDT 362
             +  +G        +V+ +      P IVF FSR  C+       +  L   T +E + 
Sbjct: 266 PPRS-TGFKPPSRVDVVQRLDAAGLLPAIVFVFSRAGCDAAVNQCVRYGLRLTTPDEVEV 324

Query: 363 VEQVFQNAVDCLNEEDRNLPAIELML-------PLLKRGIAVHHSGLLPVIKELVELLFQ 415
           + ++       ++E+ R+LP  +L +         L+RGIA HH+GLLP  KE VE LF 
Sbjct: 325 IRRI-------VDEKTRDLPQDDLTVLGYWEWREALERGIASHHAGLLPAFKETVEELFV 377

Query: 416 EGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDR 475
            GLVKA+FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D  
Sbjct: 378 RGLVKAVFATETLALGINMPARTVVLEKLVKYNGEAHVDLTPGEYTQLTGRAGRRGIDVE 437

Query: 476 GICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           G  +++    ++   +  +   +  PL S+FR  Y   +NL+ R  G   A  +++ SF 
Sbjct: 438 GHAVVVWQPGVDPKAVGGLASTRTYPLRSSFRPGYNMAVNLVHRL-GAPAARDLLEQSFA 496

Query: 536 QFQYEKALPDIGKKVSKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEKKLMSEITRP 592
           QFQ ++++  + +++ +  E  A    S      + AEY  L+  +++ EK L  + T  
Sbjct: 497 QFQADRSVVGLARRIERNREALAGYAESMTCHLGDFAEYASLRRRVSEREKALARQNTSA 556

Query: 593 ERV-----LYYLGSGRLIKVREGGTDWGWGVVVN----VVKKPSAGVGTLPSRGGGYIVP 643
            R      L  L  G +I V   G   G  VV++     + +P   V T   R  G +  
Sbjct: 557 SRAETAASLEKLRKGDVIAV-PSGRRTGLAVVIDPGLEPLGEPRPFVVT-EDRWAGRLTS 614

Query: 644 VQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P+ +  L K+RL    D R   +R+ +   ++      P    + +   D    D E
Sbjct: 615 TDFPVPVEVLGKVRLPKQVDTRSPRSRRDLAATLRNTGIVAPSARKRRSTADD----DAE 670

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
                  +  L   L AHP +  +  E   R  +R   +  E +Q + K+  +     R+
Sbjct: 671 -------LATLRRALRAHPCHGCEKREEHARWGERYHRLLAETEQTERKVAATTHSLARE 723

Query: 762 ELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTE 802
             + R+ +L++ G+++   VV+ +     + +   E +V+E
Sbjct: 724 FDRIRA-LLRERGYLE---VVEDEPEGGAVFEASSEGVVSE 760



 Score = 47.0 bits (110), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 10/168 (5%)

Query: 786 GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQ 845
           GR    + +  +LL  E + +G +  L   ++AA+ S  +   +    +  R+   K   
Sbjct: 829 GRRLTRLYSESDLLAAECLRHGVWKGLAPEELAAVVSSLVYEARRDGPMEARLPAGKVSD 888

Query: 846 QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTD----- 900
            +  +AR  AE++++ +    +D   +    P     +Y W++G +   V+  TD     
Sbjct: 889 AMTATARLWAELEDDERRH-RLDRTRQPD--PGFAWAVYRWARGESLERVLGTTDTGGTE 945

Query: 901 IFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           +  G  +R  R++ +FL+Q+R        V    +   A ++LRRG++
Sbjct: 946 LGAGDFVRWCRQVVDFLDQIRDVVGGGDPVGAAAR--KAVDALRRGVV 991


>gi|407646515|ref|YP_006810274.1| ATP-dependent RNA helicase [Nocardia brasiliensis ATCC 700358]
 gi|407309399|gb|AFU03300.1| ATP-dependent RNA helicase [Nocardia brasiliensis ATCC 700358]
          Length = 900

 Score =  336 bits (861), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 268/922 (29%), Positives = 452/922 (49%), Gaps = 71/922 (7%)

Query: 65  YNGEMAKTYS---FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQR 121
           + GE+AK  +   F LDPFQR + A LE   SVLV A T AGKT V E+A+ +A     +
Sbjct: 7   HTGELAKFSTELKFSLDPFQRTACAALEEGHSVLVCAPTGAGKTVVGEFAVHLALAAGGK 66

Query: 122 VIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV 179
             YT+P+KALSNQK+ +L + +  + VGL+TGD +++ +A  +VMTTE+LR MLY  S+ 
Sbjct: 67  CFYTTPIKALSNQKFADLTERYGRESVGLLTGDQSINSDAPVVVMTTEVLRNMLYASSDA 126

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L+ +++V+ DE+HY+ DR RG VWEE I+ LPP +++V LSAT+SNA +F  W+  +   
Sbjct: 127 LRGLSYVVMDEVHYLADRFRGAVWEEVILHLPPDVRLVSLSATVSNAEEFGAWMETVRGD 186

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVD----EKEQFREDNFVKLQDTFLKQKIGGR 295
              VV  + RP PL  +V    G  ++ + D    +++   +++ V+    F+KQ+    
Sbjct: 187 TA-VVVDETRPVPLWQHVMV--GRRMFDLFDTDSTDQKVLVDEDLVR----FIKQRELAD 239

Query: 296 RENGKASGRMAKGGSGSGGSDIFK--IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SK 351
           R N     R  +GG       + +  ++  + E    P I F FSR  C+        S+
Sbjct: 240 RANSWGGPRNGRGGPRRDFRPLPRPEVLAKLDEEGLLPAITFIFSRAGCDGALAQCLRSR 299

Query: 352 LDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVE 411
           LD    E++  V+ +       L + D  +         L RG+A HH+G+LP  +  VE
Sbjct: 300 LDLGRDEDRAEVDAIVDKHTGDLPKADLEVLGYWEWREALHRGLAAHHAGMLPAFRHTVE 359

Query: 412 LLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRG 471
            LF  GLV+A+FATET A+G+NMPA+TVV   + K++G+SH  +  GEY Q++GRAGRRG
Sbjct: 360 ELFVNGLVRAVFATETLALGINMPARTVVLERLVKFNGESHAELTPGEYTQLTGRAGRRG 419

Query: 472 KDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIK 531
            D  G  +++   +++ + +  +   +  PL S+FR  Y   +NL+ R  G   +  +++
Sbjct: 420 IDVEGHAVVLWQPEVDTSAVAGLASTRTYPLRSSFRPGYNMSINLIDRM-GAAESRALLE 478

Query: 532 NSFHQFQYEKALPDIGKKVSKLEEEAASL-DASG--EAEVAEYHKLKLDIAQLEKKLMSE 588
            SF QFQ ++++  + + + + E     L D  G  E    EY  L+  I Q E++L  +
Sbjct: 479 RSFAQFQADRSVVGLVRGIERNEAALRKLRDQLGGTEGGFLEYISLRERIKQRERQLEQQ 538

Query: 589 ITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGT------LPSRG 637
                R      L  L  G ++ +  G         + V+ +P A  G          + 
Sbjct: 539 GRSDRRGAAVEALVSLRRGDVVAIPSGRR-----AGLAVILEPDATPGDPRPLVLTADKW 593

Query: 638 GGYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
            G I     P+ +  L  +RL    D R   AR+ +  A++      P G P+    +  
Sbjct: 594 AGRISVADFPVPAEPLGHMRLPRRVDHRTAQARRDLASALRSTGISAP-GRPRRGK-RSG 651

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKM--RD 753
             +D E       +  L   L +HP +   D  Q+ R  +R   +  E + ++ K+    
Sbjct: 652 AADDRE-------LATLRRSLRSHPAHTRPDREQMARIGERYNRLLRETETMRQKVAATT 704

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           + + +  D +     +L++ G +  D  V   GR    I +  +LLV E +  G +  L 
Sbjct: 705 NSLARTFDRILG---LLQERGFVH-DSEVTADGRRLARIYSESDLLVAECLRQGLWRGLG 760

Query: 814 HHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVES 873
             ++A + S  +     S Q    + ++ P   ++ +  +   + +E + +      +  
Sbjct: 761 PAELAGVVSILV---FESRQDGGYLGVSGPTAPIRRAVGETIRVWSELRSD-EARHKLPP 816

Query: 874 TVRPFLMDV--IYCWSKGATFAEVI-----QMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
           T  P L  V  ++ W++G   AE +     Q   +  G  +R  R++ + L+Q+   A  
Sbjct: 817 TREPDLGFVTGVHKWARGDGLAESLLASGDQAAPLSAGDFVRWCRQVIDLLDQIHGTAD- 875

Query: 927 VGEVNLEKKFAAASESLRRGIM 948
             +  +    A A  ++RRG++
Sbjct: 876 --DPEVAATAAKAVRAIRRGVV 895


>gi|395768461|ref|ZP_10448976.1| helicase [Streptomyces acidiscabies 84-104]
          Length = 934

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 270/946 (28%), Positives = 457/946 (48%), Gaps = 109/946 (11%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LD FQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YEFGLDAFQIEACRALEAGKGVLVAAPTGSGKTIVGEFAVHLALGQGKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS+ L  + +V+ DE
Sbjct: 92  NQKYADLCRRYGADKVGLLTGDNSVNSDAPVVVMTTEVLRNMLYAGSQTLLGLGYVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKL------QDTFLKQKIGGRRENGKA 301
            PL  +V    G  +Y + +E E  ++    +  +L      + ++  +K G  RE  + 
Sbjct: 211 VPLFQHVL--AGRRMYDLFEEGEGSKKAVNPDLARLARMEASKPSYQDRKRGRMREADRE 268

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEE 359
             R ++    + G    ++++ +      P I F FSR  CE        + L  N  E 
Sbjct: 269 RERRSRSRVWTPGRP--EVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDDES 326

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +  V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLV
Sbjct: 327 RAEVRALVEERTAAIPREDLHVLGYFEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLV 386

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           KA+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  +
Sbjct: 387 KAVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAV 446

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
           ++    M    L  +   +  PL S+FR SY   +NL+ +  G+  +  +++ SF QFQ 
Sbjct: 447 VLWQRAMSPEHLAGLAGTRTYPLRSSFRPSYNMAVNLVEQF-GRHRSRELLETSFAQFQA 505

Query: 540 EKALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRPE 593
           ++++  I ++V + EE    LD   E+      +  EY +L+ ++   E +L  +     
Sbjct: 506 DRSVVGISRQVQRNEE---GLDGYKESMTCHLGDFEEYARLRRELKDRETELARQGVAQR 562

Query: 594 RVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG-----TLPS-RGGGY------- 640
           R    +   RL            G V++V     AG+       LP+ R  G+       
Sbjct: 563 RAESAVSLERLKP----------GDVIHVPTGKYAGLALVLDPGLPAGRANGHRGFEHHD 612

Query: 641 ---------------IVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFP 684
                          +  +  P+ +  L ++R+    + R   +R+ +  A++      P
Sbjct: 613 GPRPLVLTAERQVKRLASIDFPVPVEALDRMRIPKTFNPRSPQSRRDLASALRTKAGHIP 672

Query: 685 QGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNK-SQDENQIRCFQRKAEVNHE 743
                  P +  K       D   +I  L  +L AHP +  S+ E+  R  +R   +  +
Sbjct: 673 -------PERARKQRAQAADD--REIARLRAELRAHPCHGCSEREDHARWAERYHRLLRD 723

Query: 744 IQQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVT 801
             QL+ ++  R + I +  D +     +L +L ++  D V +   R A L    D LL +
Sbjct: 724 TSQLERRIEGRTNTIARTFDRIVA---LLTELDYLRGDEVTEHGRRLARLYGELD-LLAS 779

Query: 802 ELMFNGTFNDLDHHQVAALASCF--------------IPVDKSSEQINLRMELAKPLQQL 847
           E +  G +  L   ++AA  S                +P   +   +   + +   L  L
Sbjct: 780 ECLRAGVWEGLSPAELAACVSALVYEARVGDDAMAPKVPSGAAKAALGETVRIWGRLDAL 839

Query: 848 QESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
           +E   KI++ +   + E ++               ++ W+ G+   EV++  ++  G  +
Sbjct: 840 EEEF-KISQTEGVGQREPDLG----------FAWAVFMWASGSGLDEVLREAEMPAGDFV 888

Query: 908 RSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           R  +++ + L Q+ AAA + G   + K    A E + RG++  +S+
Sbjct: 889 RWCKQVIDVLGQVAAAAPSEGS-TVPKAARKAVEGVLRGVVAYSSV 933


>gi|33865170|ref|NP_896729.1| DNA helicase [Synechococcus sp. WH 8102]
 gi|33638854|emb|CAE07151.1| putative DNA helicase [Synechococcus sp. WH 8102]
          Length = 909

 Score =  335 bits (860), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 274/906 (30%), Positives = 434/906 (47%), Gaps = 107/906 (11%)

Query: 70  AKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLK 129
           +K + F LD FQ  ++  L +  SV+VSA T +GKT V EYAI  A    Q+V YT+PLK
Sbjct: 9   SKIFPFPLDDFQLEAIDALNQGHSVVVSAPTGSGKTLVGEYAIHRALAHGQKVFYTTPLK 68

Query: 130 ALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGS----EVLKEV 183
           ALSNQK R+  + + D  VGLMTGD++++  AS +VMTTEI R MLY  +    + L +V
Sbjct: 69  ALSNQKLRDFREAYGDDNVGLMTGDLSVNREASIVVMTTEIFRNMLYAEASEQDDPLADV 128

Query: 184 AWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHV 243
             V+ DE HYM D +RG VWEESII  PP++++V LSAT++NA Q  +WI  +H  P  +
Sbjct: 129 EAVVLDECHYMNDSQRGTVWEESIIHCPPSVQLVALSATVANAGQLTDWIQKVHG-PTTL 187

Query: 244 VYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASG 303
           V +D+RP PLQ + F     GL+ ++++       N           K+    +  K  G
Sbjct: 188 VLSDYRPVPLQ-FSF-CSAKGLHPLLNDAGTGLHPNC----------KVWRAPKGHKRKG 235

Query: 304 RMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTV 363
           R AK          F + +M  ER   P I F FSRR C++    +       +EE+  +
Sbjct: 236 RSAKPPQPEPPPISFVVAQM-AERDMLPAIYFIFSRRGCDKAVRDLGIQCLVNKEEQARI 294

Query: 364 EQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALF 423
               +       E  R+    + +L    RGIA HH+G+LP  KEL+E LFQ+GLVK +F
Sbjct: 295 RARLKAYSSENPEAVRDGIHADALL----RGIAAHHAGVLPAWKELIEELFQQGLVKVVF 350

Query: 424 ATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVD 483
           ATET A G+NMPA+T V  A+ K     HR +   E++QM+GRAGRRG D RG  ++ V 
Sbjct: 351 ATETLAAGINMPARTTVIAALSKRTERGHRPLMGSEFLQMAGRAGRRGLDSRGY-VVTVQ 409

Query: 484 EQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF----- 537
            + E       +   PA PLVS F  SY  +LNL+ R +    A  +++ SF ++     
Sbjct: 410 SRFEGVREAGQLATSPADPLVSQFTPSYGMVLNLLQRHDLN-KARELVERSFGRYLASLD 468

Query: 538 --QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIA-----------QLEKK 584
             + E  L  +  ++ +LE  A  +      +  EY KL+  +            Q E+ 
Sbjct: 469 LVEEEDVLSQLRLQLGQLEGVAGDIPWE---DFEEYEKLRGRLREERRLLRILQQQAEET 525

Query: 585 LMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP------SRGG 638
           L +E+T     L +  +G L+ ++         V   V+     G G  P          
Sbjct: 526 LANELT---LALQFASTGTLVSLKS--PQLRGRVTPAVIVDKIEGPGQFPLLLCLSDENL 580

Query: 639 GYIVPVQ--LPLISTLSKIRLS--VPPDLRPL-------DARQSILLAVQELESRFPQGL 687
             ++P Q  + + + LS +++     PDL           A   + LAV  +  R    +
Sbjct: 581 WLLLPCQSVVSIHAELSCLQVDGVTAPDLHKAGELRHGDQASGGLALAVAHVARRHDMTM 640

Query: 688 PKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQL 747
           P+ +          EV+     ++ LE +  AHP ++  D  Q++  +R+ E   +  + 
Sbjct: 641 PQYDLAG-------EVLTQARTVQALEQEQEAHPAHRWGDRKQLKKHRRRMEELEQEIEE 693

Query: 748 KSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNG 807
           + ++   +  +  +       +L++ G +D     ++ GR    +   +EL +   + +G
Sbjct: 694 RQRLLHHRSNRHWETFLALLEILQQFGCLDELTPTEI-GRTVAALRGDNELWLGLALMSG 752

Query: 808 TFNDLDHHQVAA-------------LASCFIPVDKSSEQINLRMELAKPLQQLQESARKI 854
             +DL    +AA             L S F P   + E ++    L + L + QE     
Sbjct: 753 HLDDLSAPDLAAVFEAISTEVNRPDLWSGFPPPPAAEEALHDLSGLRRELLRAQE----- 807

Query: 855 AEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLD 914
                  +L V +  + E    P LM ++  W++G  ++++I  T + EG ++R  RR  
Sbjct: 808 -------RLGVVLPAWWE----PELMGLVESWARGTDWSDLIANTSLDEGDVVRIMRRTV 856

Query: 915 EFLNQL 920
           + L Q+
Sbjct: 857 DLLAQV 862


>gi|429758766|ref|ZP_19291279.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 181 str. F0379]
 gi|429172980|gb|EKY14517.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 181 str. F0379]
          Length = 900

 Score =  335 bits (860), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 255/883 (28%), Positives = 426/883 (48%), Gaps = 74/883 (8%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SF  D FQ  ++  LE   SVLV+A T AGKT V E+A+A++     R  YT+P+KALSN
Sbjct: 39  SFTPDHFQIQAMDALEAGHSVLVAAPTGAGKTVVGEFAVALSLSTGSRAFYTTPIKALSN 98

Query: 134 QKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QK+ +  + + +  VGL+TGD +++P+A  +VMTTE+LR M+Y G++ L  ++ V+ DE+
Sbjct: 99  QKFTDFQKRYGEARVGLLTGDTSINPDAPIIVMTTEVLRNMIYMGAD-LSNLSHVVLDEV 157

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE +I LP   K++ LSAT+SNA +F EWI  + +  C V+ ++ RP 
Sbjct: 158 HYLADRFRGPVWEEVLIHLPQHTKVIALSATVSNAEEFGEWIGQV-RGSCDVIISETRPV 216

Query: 252 PL-QHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGS 310
           PL QH +  V G    +    +    +   +  +  +     G R    +   R A    
Sbjct: 217 PLFQHML--VDGELYDVYAPSRRGSGQSQRLNPELLYACSPQGRRAHQRRFRSRPA---- 270

Query: 311 GSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQ 368
                     V  +      P IVF FSR  CE     +  S +    + + + + ++ +
Sbjct: 271 ---------TVITLDRANLLPAIVFIFSRAGCEDAVREVIASGVTLTNRSQAEQIRRIAE 321

Query: 369 NAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETF 428
            A   +  ED  +  I+  +  L+RGIA HH+GLLP++KE VE LF  GL++ ++ATET 
Sbjct: 322 EATAMIPPEDYAVLGIDSWIKALERGIAAHHAGLLPLMKETVEKLFSMGLIRLVYATETL 381

Query: 429 AMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEM 488
           A+G+NMPA++VV  +++KW+G  H  + +GE+ Q+SGRAGRRG D  G  ++     +  
Sbjct: 382 ALGINMPARSVVIESLQKWNGAEHVRLSAGEFTQLSGRAGRRGIDVEGHVVVSGRRDISP 441

Query: 489 NTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGK 548
             +  +   +  PLVS F  +Y  ++NL++ +  + T    +++SF QFQ + ++ ++ +
Sbjct: 442 EEVAALASKRTYPLVSAFHPTYNMVVNLLAHSTRKAT-RKALESSFAQFQADSSVVNLAQ 500

Query: 549 KVSKLEEEAASLDASGE------AEVAEYHKLKLDIAQLEKKLMSEIT-----RPERVLY 597
               LE E   LD  GE          EY  ++  +A+LEK+   E +     + + +  
Sbjct: 501 SARALERE---LDCLGEGVDCSRGNAQEYFSMRDRLARLEKEASRERSLQRKQQDQELFR 557

Query: 598 YLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG---------GYIVPVQLPL 648
            L  G++  +   G+       + +  + SAG+  L    G         G  +   L L
Sbjct: 558 SLKPGQVFDI---GSKRKAHRYLVLELQHSAGLRPLLRTLGADARLHTLSGDDLSGALEL 614

Query: 649 ISTLSKIRLSVPPD--LRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDL 706
           ++      L VPP   LR    R+     ++ L S    G   L+ +            +
Sbjct: 615 VA-----HLRVPPSEALRRHRGREEWAQRIRTLRSERKGGKKALDSLP-----------I 658

Query: 707 VNQIEELEHKLFAHPLNKS-QDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKN 765
             +I EL   + +HP++     E   R     A  N E ++L  ++ D +      +   
Sbjct: 659 DAEISELRMAIKSHPVHSCPHREEHARAGHNWARKNAEYEKLLKRI-DGRTNSVAQQFDR 717

Query: 766 RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
               L ++G +  D +V   G+    I    +L+V E +  G ++ L   ++AA+ S  +
Sbjct: 718 VCEGLDRMGFLKND-LVTDSGQLLRRIFGDRDLIVVEALRRGVWDRLSAPELAAIVSTCV 776

Query: 826 PVDKSSEQINLRMELA--KPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVI 883
              +  E   +    A    L Q  E    +++     +  V V +  E  + P L   +
Sbjct: 777 YQSRGEESAAVEPWTAASSALAQAWEETLSLSQAVMSVEKSVGVPQSPE--LDPGLAQAV 834

Query: 884 YCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQA 926
             W+ GAT    I  T +  G  +R  R++ + L+Q+   A A
Sbjct: 835 MAWANGATLTTAIWGTPLLAGDFVRWIRQVVDLLDQIAHVASA 877


>gi|226185770|dbj|BAH33874.1| putative helicase [Rhodococcus erythropolis PR4]
          Length = 905

 Score =  335 bits (858), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 265/890 (29%), Positives = 429/890 (48%), Gaps = 61/890 (6%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A +  FELDPFQ  +   LE    VLV A T AGKT V E+A+ +A    ++  YT+P+
Sbjct: 11  FASSLKFELDPFQVKACVALEAGHGVLVCAPTGAGKTVVGEFAVHLALAAGRKCFYTTPI 70

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY EL + +   +VGL+TGD +++ +A  +VMTTE+LR MLY  SE L+ ++ V
Sbjct: 71  KALSNQKYAELVERYGPSEVGLLTGDSSINSDAPVVVMTTEVLRNMLYANSEALRGLSHV 130

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ L   +++V LSAT+SNA +F  W+  + +    VV  
Sbjct: 131 VMDEVHYLADRFRGAVWEEVILHLSEDVRLVSLSATVSNAEEFGSWMETV-RGDTTVVVD 189

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR-----ENGKA 301
           + RP PL  ++    G  ++ + D +          L D  L + +  R+     E+ + 
Sbjct: 190 ETRPIPLWQHIMV--GRRIFDLFDSRSHPAAGPKTVLVDQDLVRHVKQRQALERVESWQP 247

Query: 302 SGRMAKGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLD 353
            GR  +G   S  S+ F+      ++  + +    P I F FSR  C+        S+LD
Sbjct: 248 RGRGRRGSYQS--SNDFRPLPRPDVIAQLDQSGLLPAITFIFSRAGCDAALAQCLRSRLD 305

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
             + E+   ++ + +     L EED  +         L+RG+A HH+G+LP  ++ VE L
Sbjct: 306 LTSPEQVREIDTIIEKHTGELPEEDLEVLGYRDWCKALRRGLASHHAGMLPAFRQTVEEL 365

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F +GLV+A+FATET A+G+NMPA+TVV   + K++G+SH  +  GEY Q++GRAGRRG D
Sbjct: 366 FVKGLVRAVFATETLALGINMPARTVVLERLVKYNGESHAELTPGEYTQLTGRAGRRGID 425

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    +E   +  +   +  PL S+FR SY   +NL+ R  G   +  +++ S
Sbjct: 426 VEGHAVVLWQPGVEPTDVAGLASTRTFPLRSSFRPSYNMSINLVERM-GAADSRKLLERS 484

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLD---ASGEAEVAEYHKLKLDIAQLEKKL---MS 587
           F QFQ ++++  + + + + EE    L       + E  EY  L+  ++  E+ L     
Sbjct: 485 FAQFQADRSVVGLVRGIERNEEALKGLQEKLGGADGEYFEYASLRERLSARERALERKGR 544

Query: 588 EITRPERV--LYYLGSGRLIKVREGGTDWGWGVVV---NVVKKPSAGVGTLPSRGGGYIV 642
           E  R + V  L  L  G +I +   G   G  VV+   N  K P   V T   +  G + 
Sbjct: 545 EDRRGDAVESLRALARGDVIAI-PIGRHSGVAVVLVPDNDPKDPRPLVLT-ADQWAGRLS 602

Query: 643 PVQLP-LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
               P     L K+RL    D      R+ +  A++      P+   +    K    ED 
Sbjct: 603 SGDFPEAADVLGKMRLPKHVDHHTARIRRDLASALRSTGISAPR---RKKRHKAGASEDA 659

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
           EV  L   I        +HP +   D   + R  +R   +  E Q ++ K   +      
Sbjct: 660 EVATLRRAIR-------SHPCHSWPDREHLSRIGERYNRLARETQSMREKA-AATTNSLA 711

Query: 761 DELKNRSRVLKKLGHIDADGV--VQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
                   +LK+  ++ A+    V   GR    I +  +LLV E +  G +  L   ++A
Sbjct: 712 RTFDRIIALLKEREYMTAEAAPEVTESGRRLSRIYSESDLLVAECLRTGAWTGLSPAELA 771

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           A+ S  +   +       R+  A     L ++ R  +E++++      +   +  T  P 
Sbjct: 772 AVVSSVVYESRRDGDTVDRVPTAALRHALNDTQRLWSELRSD-----EIRHKLPPTREPD 826

Query: 879 L--MDVIYCWSK-----GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           L  +  +Y W+       A  A  +Q   +  G  +R  R++ + L+Q+R
Sbjct: 827 LGFVTAVYHWASENSLVDALIAAGVQGRALSAGDFVRWCRQVIDLLDQVR 876


>gi|229493571|ref|ZP_04387356.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|453069105|ref|ZP_21972373.1| helicase [Rhodococcus qingshengii BKS 20-40]
 gi|229319532|gb|EEN85368.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|452764308|gb|EME22578.1| helicase [Rhodococcus qingshengii BKS 20-40]
          Length = 903

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 264/890 (29%), Positives = 430/890 (48%), Gaps = 61/890 (6%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A +  FELDPFQ  +   LE    VLV A T AGKT V E+A+ +A    ++  YT+P+
Sbjct: 9   FASSLKFELDPFQVKACVALEAGHGVLVCAPTGAGKTVVGEFAVHLALAAGRKCFYTTPI 68

Query: 129 KALSNQKYRELHQEFK--DVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQKY EL + +   +VGL+TGD +++ +A  +VMTTE+LR MLY  SE L+ ++ V
Sbjct: 69  KALSNQKYAELVERYGPGEVGLLTGDSSINSDAPVVVMTTEVLRNMLYANSEALRGLSHV 128

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ L   +++V LSAT+SNA +F  W+  + +    VV  
Sbjct: 129 VMDEVHYLADRFRGAVWEEVILHLSEDVRLVSLSATVSNAEEFGAWMETV-RGDTTVVVD 187

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRR-----ENGKA 301
           + RP PL  ++    G  ++ + D +          L D  L + +  R+     E+ + 
Sbjct: 188 ETRPIPLWQHIMV--GRRIFDLFDSRSHPAAGPKTVLVDQDLVRHVKQRQALERVESWQP 245

Query: 302 SGRMAKGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLD 353
            GR  +G   S  S+ F+      ++  + +    P I F FSR  C+        S+LD
Sbjct: 246 RGRGRRGSYQS--SNDFRPLPRPDVIAQLDQSGLLPAITFIFSRAGCDAALAQCLRSRLD 303

Query: 354 FNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELL 413
             + E+   ++ + +     L EED  +         L+RG+A HH+G+LP  ++ VE L
Sbjct: 304 LTSPEQVREIDTIIEKHTGELPEEDLEVLGYRDWCKALRRGLASHHAGMLPAFRQTVEEL 363

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F +GLV+A+FATET A+G+NMPA+TVV   + K++G+SH  +  GEY Q++GRAGRRG D
Sbjct: 364 FVKGLVRAVFATETLALGINMPARTVVLERLVKYNGESHAELTPGEYTQLTGRAGRRGID 423

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    +E   +  +   +  PL S+FR SY   +NL+ R  G   +  +++ S
Sbjct: 424 VEGHAVVLWQPGVEPTDVAGLASTRTFPLRSSFRPSYNMSINLVERM-GAADSRKLLERS 482

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASLD---ASGEAEVAEYHKLKLDIAQLEKKL---MS 587
           F QFQ ++++  + + + + EE    L       + E  EY  L+  ++  E+ L     
Sbjct: 483 FAQFQADRSVVGLVRGIERNEEALKGLQEKLGGADGEYFEYASLRERLSARERALERKGR 542

Query: 588 EITRPERV--LYYLGSGRLIKVREGGTDWGWGVVV---NVVKKPSAGVGTLPSRGGGYIV 642
           E  R + V  L  L  G +I +   G   G  VV+   N  K P   V T   +  G + 
Sbjct: 543 EDRRGDAVESLRALARGDVIAI-PIGRHSGVAVVLVPDNDPKDPRPLVLT-ADQWAGRLS 600

Query: 643 PVQLP-LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDP 701
               P     L K+RL    D      R+ +  A++      P+   +    K    ED 
Sbjct: 601 SGDFPEAADVLGKMRLPKHVDHHTARIRRDLASALRSTGISAPR---RKKRHKAGASEDA 657

Query: 702 EVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFR 760
           EV  L   I        +HP +   D   + R  +R   +  E Q ++ K   +      
Sbjct: 658 EVATLRRAIR-------SHPCHSWPDREHLSRIGERYNRLARETQSMREKA-AATTNSLA 709

Query: 761 DELKNRSRVLKKLGHIDADGVVQL--KGRAACLIDTGDELLVTELMFNGTFNDLDHHQVA 818
                   +LK+  ++ A+   ++   GR    I +  +LLV E +  G +  L   ++A
Sbjct: 710 RTFDRIIALLKEREYMTAEAAPEVTESGRRLSRIYSESDLLVAECLRTGAWTGLSPAELA 769

Query: 819 ALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           A+ S  +   +       R+  A     L ++ R  +E++++      +   +  T  P 
Sbjct: 770 AVVSSVVYESRRDGDTVDRVPTAALRHALNDTQRLWSELRSD-----EIRHKLPPTREPD 824

Query: 879 L--MDVIYCWSK-----GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLR 921
           L  +  +Y W+       A  A  +Q   +  G  +R  R++ + L+Q+R
Sbjct: 825 LGFVTAVYHWASENSLVDALIAAGVQGRALSAGDFVRWCRQVIDLLDQVR 874


>gi|425734135|ref|ZP_18852455.1| DEAD/DEAH box helicase [Brevibacterium casei S18]
 gi|425482575|gb|EKU49732.1| DEAD/DEAH box helicase [Brevibacterium casei S18]
          Length = 916

 Score =  334 bits (857), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 278/909 (30%), Positives = 456/909 (50%), Gaps = 74/909 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
           +A+T  FELD FQ  +   L+  + VLV+A T AGKT +AE+A+ +A     RV YT+P+
Sbjct: 50  LART-DFELDDFQIEACQELQEGKDVLVTAPTGAGKTIIAEFAVDLAMDAGTRVFYTTPI 108

Query: 129 KALSNQKYRELH--QEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+ +L      ++VGL+TGD T+  +A  +VMTTE+LR MLY     L ++ +V
Sbjct: 109 KALSNQKFADLVAVHGAENVGLLTGDTTIRRDAPIIVMTTEVLRNMLYNDPGGLDDLGFV 168

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE II LP  +++V LSAT+SN  +F  W+  + + P  VV T
Sbjct: 169 VLDEVHYLADRFRGPVWEEVIIHLPERVQVVSLSATVSNVEEFGAWLREV-RGPTTVVST 227

Query: 247 DFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMA 306
             RP PL ++     G  +Y +    +  R D  +        +  GG R   +  G  A
Sbjct: 228 SHRPVPLVNHALV--GHRMYDLFTHHDSERIDPAL----AHATRTYGGPRSK-RERGNRA 280

Query: 307 KGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEKDTVE 364
           +    S      +IV  + E    P I+F FSR  C++       +  D N++E+   V 
Sbjct: 281 RFRRPSR----TQIVASLAEAGMLPAIMFIFSRNGCDEAVEQYIATGADLNSREDNVIVN 336

Query: 365 QVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFA 424
              +   + L  ED  +         L RG+A HH+G++P  KELVE LF  G++K +FA
Sbjct: 337 AALERLREELPAEDLGILGYHTFREGLLRGVAAHHAGMIPQFKELVEELFSAGVIKVVFA 396

Query: 425 TETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDE 484
           TET A+G+NMPA+TVV   + K++G++H  I  GEY Q++GRAGRRG D  G  +++   
Sbjct: 397 TETLALGINMPARTVVLEKLVKFNGEAHVSITPGEYTQLTGRAGRRGIDRIGHAVVVWHP 456

Query: 485 QMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALP 544
            M+++ +  +   +   L S F  +Y    NL+SR      A+ V++ SF QFQ +KA+ 
Sbjct: 457 TMDISEIAGLASNRSYALGSAFGPTYNMTANLLSRMSPADAAK-VLETSFAQFQADKAVV 515

Query: 545 DIGKKVSKLEEEAASLDAS---GEAEVAEYHKLKLDIAQLEK---KLMSEITRPERV--L 596
            + +KV K E   A+ + S      +  EY  L+ +I++ EK   +  S++ + E V  L
Sbjct: 516 GLARKVRKNEATIAAYEKSMHCDRGDFGEYAALRREISETEKQETRTKSKVKQREIVESL 575

Query: 597 YYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPS----RGG-GYIVPVQLP-LIS 650
             L  G +I +     + G  V++  +     GV  LP+    +G   ++ P ++   ++
Sbjct: 576 SALKIGDVITLPARRVE-GTAVIIAPMTNRD-GVSRLPTVLTEQGKVWHLRPHEVTEPVA 633

Query: 651 TLSKIRLSVPPDLRPLDARQSIL--LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN 708
            + +IR+    + R    R+++L  LA    + R  +       V+ +    P  V   +
Sbjct: 634 PMGRIRVPKKFNHRQASDRRALLGILAEAIADGRVDRD------VRWVPHSAPGGVS--S 685

Query: 709 QIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RDSQIQKFRDELKN 765
            + EL  ++ AHP +   D E   R   R A++  E   L  ++  R + I    + ++ 
Sbjct: 686 TVAELTARMRAHPCHDCPDREIHARWANRAAKLEKENASLIKRIEGRTTSIALVFERVQE 745

Query: 766 RSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
              VL  LG  D +    L+      I    +LLV   +  G ++ L   ++AA ASCF+
Sbjct: 746 ---VLTTLG-FDPEHSDMLR-----RIYGERDLLVALTVRAGLWDGLTEPELAAFASCFV 796

Query: 826 PVDKSSEQINLRMELAKPLQQLQESA----RKIAEIQNECKLEVNVDEYVESTVRP--FL 879
              + SE  +     ++ L+   ++A    R++  ++ +  L          T  P   L
Sbjct: 797 YQARRSESFHAERAPSRDLKVAGDAAIDLWRELFRLEEQHAL--------TPTPEPDRGL 848

Query: 880 MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAA 939
              ++ W++G   AE ++ TDI  G  +R A++  + L QL   +     V + +     
Sbjct: 849 FTPMFRWTEGKNLAESLRGTDIAAGDFVRWAKQTLDLLGQLAEVSAPETAVRIRRTI--- 905

Query: 940 SESLRRGIM 948
            E++RRG++
Sbjct: 906 -EAVRRGVV 913


>gi|297626525|ref|YP_003688288.1| Superfamily II RNA helicase [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
 gi|296922290|emb|CBL56862.1| Superfamily II RNA helicase [Propionibacterium freudenreichii
           subsp. shermanii CIRM-BIA1]
          Length = 933

 Score =  334 bits (856), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 273/945 (28%), Positives = 451/945 (47%), Gaps = 88/945 (9%)

Query: 61  ANPVYN-GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDK 119
           A P  N  + A  Y F  D FQ  +   ++    VLV+A T +GKT + EYA  +A R+ 
Sbjct: 12  ATPSENLRDFAGHYDFSFDSFQVQACGSIDAGHGVLVAAPTGSGKTVIGEYACFLAVREH 71

Query: 120 QRVIYTSPLKALSNQKYREL--HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGS 177
            R  YT+P+KALSNQKY +L       +VGL+TGDVT++ +A  +VMTTE+LR MLY  S
Sbjct: 72  SRCFYTTPIKALSNQKYHDLVAAHGADNVGLLTGDVTINGDAPIVVMTTEVLRNMLYAVS 131

Query: 178 EVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLH 237
             L+ +++V+ DE+HY+ DR RG VWEE I+ L  ++++V LSAT+SNA +F +W+  + 
Sbjct: 132 PDLETLSYVVLDEVHYLSDRFRGAVWEEVILGLAESVQVVALSATVSNAEEFGDWLDTV- 190

Query: 238 KQPCHVVYTDFRPTPL------QHYVFPVGGSG--------LYLVVDEKEQFREDNFVKL 283
           +    +V  + RP PL       H ++ + GS           L   E    R+D+    
Sbjct: 191 RGNVDIVVWEKRPVPLYQHVMADHEIYDLFGSDGRSVNPKLTALARQESRTTRDDSRRPR 250

Query: 284 QDTFLKQ---KIGGRRENGKASGRMAKGGSGSGGSDIFK--IVKMIMERKFQPVIVFSFS 338
                 +     G  +  G +S R+      S G    +  +V  + +    P I F FS
Sbjct: 251 GRNGRGKRRVTYGSGQFGGASSSRVGDRRHQSHGLTPSRAMVVTALQKAGLVPAIYFVFS 310

Query: 339 RRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIA 396
           R+ C+     +  S +    + E+  + ++ Q     L+E DR        +  L RGIA
Sbjct: 311 RQGCDAAVRQLLRSGVRLTDRTERAQLRELAQREGASLSETDRAALGWNDFVEALSRGIA 370

Query: 397 VHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIG 456
            HH+GLLPV K +VE  F  G +K +FATET A+G+NMPA+TVV   + K++G++H  I 
Sbjct: 371 AHHAGLLPVFKAIVEEGFTRGWLKVVFATETLALGINMPARTVVLERLVKYNGETHADIT 430

Query: 457 SGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNL 516
            GEY Q++GRAGRRG D  G  +++    M+   +  +   +  PL S+F  +Y   +NL
Sbjct: 431 PGEYTQLTGRAGRRGIDTEGHAVVLWQTGMDPRAVAGLASKRTYPLRSSFAPNYNMAVNL 490

Query: 517 MSRAEGQFTAEHVIKNSFHQFQYEK---ALPDIGKKVSKLEEEAASLDASGEAEVAEYHK 573
           + R+ G+  A  +++ SF QFQ ++   A    G  V+    +A         + A Y +
Sbjct: 491 V-RSAGRDRARSLLEQSFAQFQADRKVVAAARQGVAVAGQIADAWQQAHCSRGDFASYAR 549

Query: 574 LKLDIAQLEKKLMSEITRPERVLYYLGSGRL----IKVREGGTDWGWGVVVNVVKKPSAG 629
           L+ ++ +LE++      + +R     G  RL    +   + G   GW VV+         
Sbjct: 550 LRDEVRELEREQARLRKQDQRAAVLDGLSRLEPGDVIHLDAGKGSGWLVVIE-------- 601

Query: 630 VGTLPSRGGG---------------YIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSIL 673
               P+R G                 I P Q      T +K+R+    D     AR+++ 
Sbjct: 602 ----PARPGKPEPHPLVMGEDHQIVRIAPEQFKSAPVTAAKVRVPKRFDRHSAAARKALS 657

Query: 674 LAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKS-QDENQIR 732
            A   L++R  +GL     V+  +   P   ++ +QI EL  +L AHP +     E+  R
Sbjct: 658 RA---LDARI-EGL----SVEAGRSRAPLDAEISHQISELRARLRAHPCHDCPHREDHAR 709

Query: 733 CFQR--KAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDAD--GVVQLKGRA 788
             +R  + E  + + Q ++  R + I    D +     VL  LG++D      V   G  
Sbjct: 710 AAERALRLERENNVTQRRAADRRNSIAAQFDRI---CAVLDALGYLDPSHPDEVTPAGTM 766

Query: 789 ACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRM---ELAKPLQ 845
              I +  +L+V + +    F +L+  Q+AA+ S  +   ++++    RM     A+  +
Sbjct: 767 LTRIYSELDLVVAQAIREKVFAELNGPQLAAVLSTMVYEARATDTGGHRMPDDTSARAER 826

Query: 846 QLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGS 905
            L+   R++  ++ + ++E   D  +         D    W+ GA+ A+++    +  G 
Sbjct: 827 ALRSVWREVGLVERDHRVERQRDLDIG------FADAAAQWASGASLADILGEFGLTAGD 880

Query: 906 IIRSARRLDEFLNQLRAAA--QAVGEVNLEKKFAAASESLRRGIM 948
            +R  R++ +  +Q+ AA     +G   L +   A    LRR I+
Sbjct: 881 FVRWTRQVVDLASQISAAPGLAELGSPGLARTCRAVIGLLRRDIV 925


>gi|443716800|gb|ELU08146.1| hypothetical protein CAPTEDRAFT_226316 [Capitella teleta]
          Length = 654

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 224/667 (33%), Positives = 354/667 (53%), Gaps = 57/667 (8%)

Query: 331 PVIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPL 390
           PV+ F+ S+++ +++A  MS +D  +Q EK  +   FQ  V  L   D NLP ++ M  L
Sbjct: 2   PVVAFTLSKKKIDENARHMSSVDLTSQTEKSEIHVFFQRCVSRLKGSDVNLPQVKFMGDL 61

Query: 391 LKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGD 450
           LKRG+ VHHSG+LP++KE+VE+LFQ GLVK LFATETFAMG+NMPA+TVVF +++K DG 
Sbjct: 62  LKRGLGVHHSGILPILKEVVEMLFQRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGV 121

Query: 451 SHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQM-EMNTLKDMVLGKPAPLVSTFRLS 509
             R +  GEYIQM+GRAGRRG D  G  I++    + EM+ L  M+LGKP  L S FRL+
Sbjct: 122 RPRDLLPGEYIQMAGRAGRRGLDTTGTVILLCKGDVPEMSDLHKMMLGKPTVLHSQFRLT 181

Query: 510 YYSILNLMSRAEGQFTAEHVIKNSFHQF-------QYEKALPDIGKKVSKLEEEAASLDA 562
           Y  ILNL+ R E Q   E ++K SF +F       Q ++A   + ++++ +EE    +D 
Sbjct: 182 YSMILNLL-RVE-QLRVEDMMKRSFSEFHAQRNAGQRKEAFQVLTEQLNSMEE---VIDC 236

Query: 563 SGEAE-----VAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVRE-------- 609
            G+         EY +L+     +++ L+S        L  L +GR+I +          
Sbjct: 237 CGDLHAYYIACDEYFRLR---GYIQRVLLSH----PLALKALSAGRVIVLDNQQLRNVAA 289

Query: 610 -------------------GGTDWGWGVVVNVVKKPSAGVGTLPSRGGG-YIVPVQLPLI 649
                               G D        ++ +P       P R  G  +V ++   I
Sbjct: 290 LVLKTDNMSKEKAFVVLMLTGNDDREDATDGLMPRPVDLSLFRPDRACGQTVVTIKGEDI 349

Query: 650 STLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQ 709
           + +S     +  D    D R+  +   +      P GL  L+P+ D+ I D ++V+   +
Sbjct: 350 ACISNKTCRISADKILDDHRKRQIPRFKADPPANPDGLTSLDPINDLHIRDVDLVEDFQR 409

Query: 710 IEELEHKLFAH-PLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSR 768
           ++ LE     +  +N+    +     +   ++  E   LK  + D  +     E + R  
Sbjct: 410 LKYLEANFGQYMCVNEPNFSDNFARMRANVKLREEYNNLKYLLSDESL-TLLPEYQQRIE 468

Query: 769 VLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           VLKKL +ID    VQLKGR AC I +  EL++TEL+F      L   ++A+L SC +   
Sbjct: 469 VLKKLNYIDDSNTVQLKGRVACEI-SNQELIITELVFENALTSLQPAEIASLLSCVVFEV 527

Query: 829 KSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSK 888
           K + + NL   L +  ++  + A  I E+Q  C + + V++Y+ +     LM+V+Y W+K
Sbjct: 528 KRASEANLEPNLLEAKERFLKLATSIGELQKSCGVAIPVEDYL-ADFHFNLMEVVYEWAK 586

Query: 889 GATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           G  F++++ +TD+ EG I+R  +RLDE L  +R AA+ +G+  L +K   AS+ ++R I+
Sbjct: 587 GRPFSDLMNLTDVQEGIIVRCIQRLDEVLKDVRNAARIIGDPVLYQKMEEASQLIKRDIV 646

Query: 949 FSNSLYL 955
           F+ SLY+
Sbjct: 647 FAASLYM 653


>gi|5541663|emb|CAB51169.1| putative helicase, fragment [Arabidopsis thaliana]
          Length = 705

 Score =  334 bits (856), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 227/713 (31%), Positives = 374/713 (52%), Gaps = 100/713 (14%)

Query: 332 VIVFSFSRRECEQHAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLL 391
           V+VF FS+  C++ A +++  D  +  EK  +      A   L   DRNLP +  +  LL
Sbjct: 1   VVVFCFSKNYCDRCADALTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVLRLQSLL 60

Query: 392 KRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDS 451
            RGI VHH+GLLP++KE+VE+LF  G++K LF+TETFAMG+N PA+TVVF A++K+DG  
Sbjct: 61  HRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDALRKFDGKE 120

Query: 452 HRYIGSGEYIQMSGRAGRRGKDDRGICIIMV-DEQMEMNTLKDMVLGKPAPLVSTFRLSY 510
            R +  GEY QM+GRAGRRG D  G  ++M  DE  + + L+ +++G    L S FRL+Y
Sbjct: 121 FRQLLPGEYTQMAGRAGRRGLDKTGTVVVMCRDEVPDESDLRRVIVGSATRLESQFRLTY 180

Query: 511 YSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPD------IGKKVSKLEEEAASLDAS- 563
             IL+L+ R E +   E ++K SF +F  +K LP+      I + +     E   L  S 
Sbjct: 181 IMILHLL-RVE-ELKVEDMLKRSFAEFHAQKKLPEKQQLLMIKRSLPTKHIEIDLLIYSS 238

Query: 564 ----GEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREG-GTDWGWGV 618
               GE  + +Y+ + ++  +   K+   + +      +L  GR++ ++ G G D   G+
Sbjct: 239 RCIKGEPAIEDYYDMYMEANEYNNKMSEAVMQSPYAQSFLVQGRVVVMKSGMGIDNLLGI 298

Query: 619 V---------------------------VNVVKK---PSAGVGTLP-------------- 634
           V                           V++ KK   PS G    P              
Sbjct: 299 VLKGPSNTNRQYVVLVIKSEIPPPEKNMVSIGKKSSDPSQGYFIAPKSKRGFEEEFYTKP 358

Query: 635 -SRGGGYIVPVQLP--------------------LISTLSKIRLS---VPPDLRPLDARQ 670
            SR G  ++ ++LP                    L    SKI++    +  D       Q
Sbjct: 359 SSRKGPVVIKIELPYHGVAAGVGYEVKGFDNKEFLCICDSKIKIDQVRLLEDGNKAAFSQ 418

Query: 671 SI--LLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDE 728
           ++  LL ++   ++FP   P L+PVKD+K++D E+V+   +   L  K+    +NK    
Sbjct: 419 TVQQLLDLKSDGNKFP---PALDPVKDLKLKDAELVETYYKWTNLLQKM---SMNKCHGC 472

Query: 729 NQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDEL------KNRSRVLKKLGHIDADGVV 782
            ++   +   ++  EI++ K+ ++D + Q   + L      + R  VLK +G ID D VV
Sbjct: 473 VKL---EEHMKLAREIKKHKTDLKDLEFQMSDEALLQMPAFQGRIDVLKNIGCIDDDLVV 529

Query: 783 QLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAK 842
           Q+KGR AC +++G+EL+ T  +F   F +L+  +  A+ S F+   K++    L  +LAK
Sbjct: 530 QIKGRVACEMNSGEELICTVCLFENQFEELEPEEAVAIMSAFVFQQKNTSAPTLTPKLAK 589

Query: 843 PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
             Q+L ++A ++ E+Q +  L+++ +EY +  ++  L++V+Y W+KG  FAE+ ++TD+ 
Sbjct: 590 AKQRLYDTAIRLGELQAQYNLQIDPEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVP 649

Query: 903 EGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSLYL 955
           EG I+R+  RLDE   + + AA  +G   L KK  AAS +++R I+F+ SLY+
Sbjct: 650 EGLIVRTIVRLDETCREFKNAAAIMGNSALHKKMDAASNAIKRDIVFAASLYV 702


>gi|113954669|ref|YP_731534.1| superfamily II RNA helicase [Synechococcus sp. CC9311]
 gi|113882020|gb|ABI46978.1| Superfamily II RNA helicase [Synechococcus sp. CC9311]
          Length = 910

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 270/898 (30%), Positives = 434/898 (48%), Gaps = 87/898 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++++ + F LD FQ  S+  L +  SV+VSA T +GKT V EYAI  A    Q+V YT+P
Sbjct: 4   DVSQLFPFPLDGFQLESIDALNQGHSVVVSAPTGSGKTLVGEYAIHRAIAHGQKVFYTTP 63

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE----VLK 181
           LKALSNQK R+  ++F  ++VGLMTGD++++  A  +VMTTEI R MLY  ++     L 
Sbjct: 64  LKALSNQKLRDFREQFGAENVGLMTGDLSVNREARVVVMTTEIFRNMLYAEADEHDDPLA 123

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           +V  V+ DE HYM D +RG VWEESII  PP++++V LSAT++NA Q  +WI  +H  P 
Sbjct: 124 DVESVVLDECHYMNDSQRGTVWEESIIHCPPSVQLVALSATVANAGQLTDWIEKVHG-PT 182

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
            +V +DFRP PLQ + F     GL+ +++E+      N           K+    +  K 
Sbjct: 183 RLVLSDFRPVPLQ-FSF-CSAKGLHPLLNEQGTGIHPNC----------KVWRAPKGHKR 230

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            GR  +          F + +M  +R+  P I F FSRR C++    +      T+ E+ 
Sbjct: 231 KGRSPRPPQPEAPPISFVVAQM-AQREMLPAIYFIFSRRGCDKAVRDLGVQCLVTEAEQS 289

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            + +  +       E  R+    + +L    RGIA HH+G+LP  KEL+E LFQ+GLVK 
Sbjct: 290 IIRERLEAYTVANPEAVRDGQHADALL----RGIASHHAGVLPAWKELIEELFQQGLVKV 345

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +FATET A G+NMPA++ V  ++ K     HR + + E++QM+GRAGRRG D +G  + +
Sbjct: 346 VFATETLAAGINMPARSTVIASLSKRTERGHRPLMASEFLQMAGRAGRRGLDTQGYVVTV 405

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
                 +     +      PLVS F  SY  +LNL+ R +    A  +++ SF ++    
Sbjct: 406 QSRFEGVREAAQLATSPSDPLVSQFTPSYGMVLNLLQRHD-LAKARELVERSFGRYLASL 464

Query: 542 ALPDIGKKVSKLEEEAASLDASGE----AEVAEYHKLKLDIA-----------QLEKKLM 586
            L +  + + +L  + A L  +       +  +Y K +  +            Q E+ L 
Sbjct: 465 DLVEEEEHLGELRMQLAQLQGTAGDVPWEDFEDYEKQRGRLREERRLLRILQQQAEETLA 524

Query: 587 SEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP------SRGGGY 640
            E+T     L +   G L+ ++        GV   V+ +   G G  P            
Sbjct: 525 HELT---IALQFASVGTLVSLK--SPRLRGGVTPAVIVEKCDGPGQFPLLLCLTLDNVWM 579

Query: 641 IVPVQ--LPLISTLSKIRLS--VPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDM 696
           ++P Q  + L + LS +++     PDL    +R   L    +   R    +  +    DM
Sbjct: 580 MLPCQGVVSLHAELSCLQVDGVKSPDL----SRSGELRHGDQDSGRLALAVAHMARRHDM 635

Query: 697 KIED----PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE-VNHEI---QQLK 748
                    EV+  V  ++ELE +L  HP ++  D  Q++  +R+ E + HEI   QQL 
Sbjct: 636 TTAQYDLAGEVLSQVRLVQELEDQLEGHPAHRWGDRKQLKKHRRRMEDLQHEIRERQQLL 695

Query: 749 SKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGT 808
               +   + F   ++    +L+  G +D     ++ GR    +   +EL +   + +G 
Sbjct: 696 HHRSNRHWEIFLALIE----ILRHFGCLDDLEPTEI-GRTVAALRGDNELWLGLALMSGH 750

Query: 809 FNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP------LQQLQESARKIAEIQNECK 862
            ++L     A LA+ F  +     + +L      P      L  L    R++   Q   K
Sbjct: 751 LDELP---PAELAAVFEAISTEVNRPDLWSAFPAPPLAEEALHDLSGIRRELLRAQERFK 807

Query: 863 LEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           +       V +   P LM ++  W+KG ++ ++I  T + EG ++R  RR  + L Q+
Sbjct: 808 V------VVPAWWEPELMGLVEAWAKGTSWNDLIANTSLDEGDVVRIMRRTVDLLAQV 859


>gi|37522164|ref|NP_925541.1| helicase [Gloeobacter violaceus PCC 7421]
 gi|35213164|dbj|BAC90536.1| gll2595 [Gloeobacter violaceus PCC 7421]
          Length = 879

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 200/520 (38%), Positives = 296/520 (56%), Gaps = 39/520 (7%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++ + + F+LD FQR ++A L+ NESV+V A T +GKT +AEY +  A   ++RV YT+P
Sbjct: 8   DLLQLFPFDLDDFQREAIAALDENESVVVCAPTGSGKTVIAEYMVYRALAREKRVFYTTP 67

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLY-----RGSEVL 180
           LKALSNQK+R+   +F  + VGL+TGD++L+ +A  +VMTTEI R MLY          L
Sbjct: 68  LKALSNQKFRDFCSQFGPEQVGLLTGDISLNRDAPVVVMTTEIFRNMLYGMPLGEMGTTL 127

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
            +V  VI DE HYM D +RG VWEESII+ P  I++V LSAT++NA Q  +WI  +H  P
Sbjct: 128 AQVEAVILDECHYMNDSQRGTVWEESIIYCPANIQLVALSATIANAGQLTDWITRVHG-P 186

Query: 241 CHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENG 299
             ++Y+DFRP PL+ H+  P    GL+ ++D   Q    +F  +     K+ + G R N 
Sbjct: 187 TRLIYSDFRPVPLEIHFCSP---KGLFPLLDRGNQRINPHFKNI-----KKHLRGER-NL 237

Query: 300 KASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEE 359
           +A     K            ++  +  R   P I F FSRR C+Q    +  L      E
Sbjct: 238 QADAPSHK-----------YVIGQLARRDMLPAIYFIFSRRGCDQALEELGDLCLLDAHE 286

Query: 360 KDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLV 419
           +   EQ+ +   D + E    +   +L    +  G+AVHH+G+LP  K L+E LFQ+GL+
Sbjct: 287 Q---EQLARQVDDFVREHPEAVRTHQLSQ--IYNGLAVHHAGVLPAWKALIEELFQQGLI 341

Query: 420 KALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICI 479
           K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D+ G  +
Sbjct: 342 KVVFATETLAAGINMPARTTVISMLSKRTDSGHRPLNASEFLQMAGRAGRRGMDEVGHVV 401

Query: 480 IMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQY 539
            +            + L +  PLVS F  SY  +LNL+ R   + TA+ ++ NSF Q+  
Sbjct: 402 TLQSPFESAPEAAALALSQADPLVSQFTPSYGMVLNLLERHSLE-TAQRLVGNSFGQYLA 460

Query: 540 EKALPDIGKKVSKLEEEAASL---DAS-GEAEVAEYHKLK 575
              L  + ++ +++  E  +L   DA   EAE+A Y KL+
Sbjct: 461 TLHLEPVRREHAEVSAELEALAGGDAPVSEAELAAYEKLR 500



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 11/226 (4%)

Query: 699 EDPEVVDLV-NQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKMRDSQIQ 757
           E PE V    N++E+L      HP ++    +  +  Q   E   +  Q  ++    +  
Sbjct: 631 EPPEAVTAQKNEVEQLRLAQENHPAHRWSGRSAHQRAQHHREKLLKRHQRLAEQLSGESD 690

Query: 758 KFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQV 817
           ++  E     RVL+K+  +D      L G  A  I   +EL +   + N     L+  Q+
Sbjct: 691 RYWQEFLRLVRVLEKVEFLDNHKPNAL-GAVAAAIRGDNELWLALALLNPEVEKLNAVQM 749

Query: 818 AALASCFI---PVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVEST 874
           A LA+  +   P   +   +    ++ + +  LQ++ R +  +Q   ++ ++V  ++E  
Sbjct: 750 AGLAAALVSEPPRPNTWATVTPSPQVEEAIAALQQTRRNLVRLQRRQQVLISV--WLEER 807

Query: 875 VRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
               L+ ++  W+KG  +  +   T++ EG ++R  RR  + L Q+
Sbjct: 808 ----LVGLVELWAKGVDWQTLCGSTNLDEGDLVRLLRRTADLLRQV 849


>gi|334117201|ref|ZP_08491293.1| DSH domain protein [Microcoleus vaginatus FGP-2]
 gi|333462021|gb|EGK90626.1| DSH domain protein [Microcoleus vaginatus FGP-2]
          Length = 915

 Score =  333 bits (855), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 277/918 (30%), Positives = 442/918 (48%), Gaps = 113/918 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQR ++A L+  +SV+V A T +GKT + EYAI  A    +RV YT+P
Sbjct: 12  DLKTIFPFELDNFQREAIAALDAGKSVVVCAPTGSGKTLIGEYAIHQALSRGRRVFYTTP 71

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+   +F D  VGL+TGD++++ +A  LVMTTEI R MLY G+ +      
Sbjct: 72  LKALSNQKLRDFRSQFGDDNVGLLTGDISVNRDAPILVMTTEIFRNMLY-GTPIGEVGTS 130

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L  V  V+ DE HYM DR+RG VWEESII+    I+++ LSAT++N+ Q  +WI  +H  
Sbjct: 131 LTGVETVVLDECHYMNDRQRGTVWEESIIYCSSEIQLLALSATVANSEQLTDWINKVHG- 189

Query: 240 PCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN- 298
           P  +VY+DFRP PLQ +       G++ ++DE                      G+R N 
Sbjct: 190 PTELVYSDFRPVPLQFHF--ANQKGIFPLLDET---------------------GKRANV 226

Query: 299 ----GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDF 354
                K   ++ +G   +    +  ++  + +R   P I F FSRR C+Q    +     
Sbjct: 227 RLVPKKKQQKVERGSIPT--PSLTDVLARLDDRDMLPAIYFIFSRRGCDQAVAEVGNFSL 284

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
             + E   ++++  + +   N E       E +L    +GIA HH+G+LP  K LVE LF
Sbjct: 285 VNEAETAELKRIIDDFLQ-RNPEAERFGQKEALL----KGIAAHHAGILPAWKGLVEELF 339

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
             GL+K +FATET A G+NMPA+T V + + K     HR + + E++QM+GRAGRRG D 
Sbjct: 340 GRGLIKVVFATETLAAGINMPARTTVISTLSKRTDKGHRLLNASEFLQMAGRAGRRGMDK 399

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  + +            +   K  PL S F  SY  +LNL+ +      A+ +++ SF
Sbjct: 400 LGHVVAVQTRFEGAKEASYLATAKADPLASQFTPSYGMVLNLL-QTHTLDEAQELVERSF 458

Query: 535 HQFQYEKALPDIGKKVSKLEEEAA----SLDASG-----EAEVAEYHKLKLDIAQLEKKL 585
            Q+     L     ++ +L+ E A    SL A G     E E+A Y KL+  + + ++ L
Sbjct: 459 GQYLSTLYLQPQQSELDRLQTELAVLEQSLAAGGNVSTLEKELAHYEKLQGRLKEDKRLL 518

Query: 586 MSEITRPERVLY----------YLGSGRLIKVREGGT--DWGWGVVVNVVKKPSAGVGTL 633
              + + E   +           LG+   +K +   T        V  V+    AG G  
Sbjct: 519 KILLQQAEEARFKEMSVAVAFAVLGTVLSLKGKHVPTAKRSHTNPVPAVLVAKIAGSGQA 578

Query: 634 PS------RGGGYIVPV--------QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQEL 679
           P+          Y+V +        +LP +S    +    PP   PL   Q  L    E 
Sbjct: 579 PNLVCLGKDNRWYVVAISDVATLHAELPRLSVADTLN---PPSEMPLRLGQCRL--ANEE 633

Query: 680 ESRFPQGLPKLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHP-LNKSQDENQIRCFQRKA 738
            +     +P+L P  +     PE ++   +I  LE +L  H  L        ++  +R+ 
Sbjct: 634 TASIAASIPEL-PTPE---PSPEAIEQQQKIAALEAQLEVHRVLEWGNPGTLLKRQRRRE 689

Query: 739 EVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHID----ADG---------VVQLK 785
           E+  EI++ + ++ + Q  ++ ++  N   +L   G ++    A G         V  + 
Sbjct: 690 ELKKEIRKSEQEL-EKQRARYWEQFLNLIDILLNFGCLERVVSATGNRDDSSDRLVPTIL 748

Query: 786 GRAACLIDTGDELLVTELMFNGTFNDLD-HHQVAALASCFIPVDK--SSEQINLRMELAK 842
           G+A   I   +EL +   + +  F++LD HH  AA A+    V +  S    +L  E+  
Sbjct: 749 GQACAAIRGDNELWLGLSLMSAEFDELDPHHLAAACAALVTEVSRPDSWTHYSLSPEVLA 808

Query: 843 PLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIF 902
           PL  LQ+  R+    Q + + E  +  ++E      L+ ++  W+ G  + E+I  T + 
Sbjct: 809 PLDNLQKGLRRRL-FQVQYRHEAAIPIWLERD----LVTLVEQWALGVEWLELISHTSLD 863

Query: 903 EGSIIRSARRLDEFLNQL 920
           EG ++R  RR  +FL+Q+
Sbjct: 864 EGDVVRILRRTLDFLSQI 881


>gi|345853069|ref|ZP_08805984.1| helicase [Streptomyces zinciresistens K42]
 gi|345635471|gb|EGX57063.1| helicase [Streptomyces zinciresistens K42]
          Length = 935

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 270/924 (29%), Positives = 443/924 (47%), Gaps = 64/924 (6%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A    ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALLQGKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + + D  VGL+TGD +++  A  +VMTTE+LR MLY GS+ L  +  V+ DE
Sbjct: 92  NQKYADLCRRYGDGTVGLLTGDNSINSEAPVVVMTTEVLRNMLYAGSQTLLGLGHVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTQVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V  + G  +Y + +E E  ++    +  +L      +     R  G+A     +
Sbjct: 211 VPLFQHV--LAGRRMYDLFEEGEGHKKAVNPDLTRLARMEATRPSYQDRRRGRAMREADR 268

Query: 308 GGSGSGGSDIF-----KIVKMIMERKFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEK 360
                  + ++     ++++ +      P I F FSR  CE        + L  N  E +
Sbjct: 269 ERERRQRTRVWTPGRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLFAGLRLNDDEAR 328

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVK 420
           + V  + +     +   D ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVK
Sbjct: 329 ERVRALVEERTSAIPAGDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVK 388

Query: 421 ALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICII 480
           A+FATET A+G+NMPA++VV   + KW+G+ H  I  GEY Q++GRAGRRG D  G  ++
Sbjct: 389 AVFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEYTQLTGRAGRRGIDVEGHAVV 448

Query: 481 MVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           +         L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +
Sbjct: 449 LWQRGSSPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQAD 507

Query: 541 KALPDIGKKVSKLEEEAASLDASGEA------EVAEYHKLKLDIAQLEKKLMSEITRPER 594
           K++  I ++V + EE    LD   E+      +  +Y +L+ ++   E +L  +     R
Sbjct: 508 KSVVGISRQVQRNEE---GLDGYKESMTCHLGDFEDYARLRRELKDRETELARQGASQRR 564

Query: 595 -----VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGG--GYIVPVQLP 647
                 L  L  G +I V  G         + +V  P    G      G   +  P  L 
Sbjct: 565 SEAAVALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFDHHDGPRPLV 619

Query: 648 LISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN-----------PVKDM 696
           L +     RL+      P++A + + +  +   +R PQ    L            P +  
Sbjct: 620 LTAERQVKRLAAMDFPVPVEALERMRIP-KSFNARSPQSRRDLASALRTKAGHIPPERHR 678

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RD 753
           K       D   +I  L   + AHP +   D E+  R  +R   +  +   L+ ++  R 
Sbjct: 679 KRRSQAADD--REIARLRKAIRAHPCHGCDDREDHARWAERYHRLLRDTSHLERRIEGRT 736

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           + I +  D +     +L +L ++  D V +   R A L    D LL +E +    +  L 
Sbjct: 737 NTIARTFDRIVA---LLTELDYLRGDEVTEHGKRLARLYGELD-LLASECLRERVWEGLG 792

Query: 814 HHQVAALASCFIPVDK-SSEQINLRMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYV 871
             ++AA  S  +   +   + +  ++   +    L E+ R    +   E    ++  E V
Sbjct: 793 PAELAACVSALVYEARVGDDAMAPKLPSGRAKAALGETVRIWGRLDALEEDFGISQTEGV 852

Query: 872 ESTVRPFL--MDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGE 929
                P L      Y W+ G    EV++  ++  G  +R  +++ + L Q+ AAA A G 
Sbjct: 853 -GQREPDLGFAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQIAAAAPAEGS 911

Query: 930 VNLEKKFAAASESLRRGIMFSNSL 953
             + K    A E L RG++  +S+
Sbjct: 912 -TVAKNARKAVEGLLRGVVAYSSV 934


>gi|300741521|ref|ZP_07071542.1| putative ATP-dependent RNA helicase [Rothia dentocariosa M567]
 gi|300380706|gb|EFJ77268.1| putative ATP-dependent RNA helicase [Rothia dentocariosa M567]
          Length = 973

 Score =  333 bits (854), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 280/995 (28%), Positives = 465/995 (46%), Gaps = 124/995 (12%)

Query: 54  EAIHGTFANPVYN-----------------GEMAKTYSFELDPFQRVSVACLERNESVLV 96
           E  HG+   P Y+                 G+  KT  F LD FQR +   +E   +VLV
Sbjct: 7   ETTHGSNDRPSYSAQYQAAQERNAHAKTALGKFEKTLGFPLDSFQRQACQSVEAGHAVLV 66

Query: 97  SAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQKYRELHQEF--KDVGLMTGDVT 154
           +A T AGKT V E+ I +A +   +  YT+P+KALSNQKY +  +E+  + VGL+TGD +
Sbjct: 67  AAPTGAGKTVVGEFGIYLALQTGTKAFYTTPIKALSNQKYHDFVREYGEESVGLLTGDTS 126

Query: 155 LSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAI 214
           ++  A  +VMTTE+LR MLY  S  L  + +VI DE+HY+ DR RG VWEE+II LP  +
Sbjct: 127 INTEAPIVVMTTEVLRNMLYAESTTLIGLGYVIMDEVHYLADRFRGAVWEEAIIHLPEHV 186

Query: 215 KMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQ 274
            ++ LSAT+SN  +F  W+  + +    V+ ++ RP PL  ++  VG   + L V ++  
Sbjct: 187 TVISLSATVSNVEEFGAWLDTV-RGDTDVILSEHRPVPLWQHLM-VGNRVIDLFVPDETS 244

Query: 275 FREDNFVKLQ----------------DTFLKQ-KIGGRRENGKASG-------------- 303
            +E +  K +                +  LKQ + G RR   + +               
Sbjct: 245 QKEASPTKRRKNHTKSPQNAPAGLRINPLLKQLRPGFRRHTSRHNAPKRERFRRGRNRHD 304

Query: 304 ------RMAKGGSGSGGSDIFK--------IVKMIMERKFQPVIVFSFSRRECEQHAMSM 349
                   ++  + +  +D+ +        + +++ ++   P I F FSR  C+      
Sbjct: 305 KHTHALERSRHKTFTQDTDVLRPHRISRPEMARILDKQGLLPAICFIFSRAACDDAVTQC 364

Query: 350 --SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIK 407
             + +   T+E++ T+          L+  D +          L RG+A HH+GLLP+ K
Sbjct: 365 VNANIVLTTEEQEQTIRAYIAETTAHLDNRDLHALGYYEWRDGLIRGVAAHHAGLLPLFK 424

Query: 408 ELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRA 467
           E+VE LF +GL+K +FATET A+G+NMPA+TV+   + K++G++H  I  GEY Q++GRA
Sbjct: 425 EVVETLFAQGLIKLVFATETLALGINMPARTVILEKLTKFNGETHVDITPGEYTQLTGRA 484

Query: 468 GRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAE 527
           GRRG D  G  +++    +    +  +   +  PL S+FR +Y    NL++ A G     
Sbjct: 485 GRRGIDLEGHAVVLWRPGLVPEQVATLASTRTYPLNSSFRPTYNMAANLIA-AYGAERTR 543

Query: 528 HVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKK 584
            ++++SF QFQ +K++     +V K E        S +  +    EY +L+ +I  LEKK
Sbjct: 544 KILESSFAQFQADKSVVGTAARVRKNENALEGYRDSMQCHLGDFTEYMRLRQNIKDLEKK 603

Query: 585 LMSEITRPERVLYY-----LGSGRLIKVREGGTDWGWGVVVNVVKK---PSAGVGTLPSR 636
                 +  R   +     L SG +I +  G +  G+ +V+   +    P  G+ T  ++
Sbjct: 604 NRKANQQHARAQTHQSIQELMSGDIIHIPHGRSR-GYAIVITRAESNTDPRIGILTEDNQ 662

Query: 637 G--------GGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
                     G I PV    I    KI L  P + R   +R    L    ++ R P+ L 
Sbjct: 663 QRTASARDFTGLIEPVS--YIKIPKKITLKTPKERRDAVSRMRQAL----IDERPPRKLG 716

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQL 747
              P+     +  E +D +  +      L  HP +   D E   R  +R  ++N E + L
Sbjct: 717 N-TPIATRHSDAQEKLDTLRTL------LRNHPCHGCSDRETHARWAERWRKLNAETEGL 769

Query: 748 KSKM--RDSQIQKFRDELKNRSRVLKKLGHIDADG----VVQLKGRAACLIDTGDELLVT 801
           + ++  R + I +  + +   +++L + G++ AD      +  KG A   +    +LL +
Sbjct: 770 RRQITRRTNTIAQVFNRI---AKLLTEYGYVTADSHNGLKLTTKGEALRKLYGEKDLLTS 826

Query: 802 ELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE- 860
             +  G   DLD   +AA  +      K  E I +      P  Q       IA I  E 
Sbjct: 827 ICLEKGFLTDLDPAAIAATIAALTYQGK-KETIEILPRYPHPSLQA-----PIATINREL 880

Query: 861 CKLEVNVDEYVESTVRPF---LMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFL 917
            +L  + + +      P    L+  IY W++G   A+ ++ TD+  G  +R A+++ + L
Sbjct: 881 ARLNAHEERHKLDQTPPCDLGLVTPIYRWARGMHLAKALEDTDLAAGDFVRWAKQVIDAL 940

Query: 918 NQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNS 952
           +Q+  A       NL      A   +RRG++  +S
Sbjct: 941 DQI--AHIPTISPNLRASCEKAIALIRRGVVALDS 973


>gi|379736063|ref|YP_005329569.1| putative helicase helY [Blastococcus saxobsidens DD2]
 gi|378783870|emb|CCG03538.1| putative helicase helY [Blastococcus saxobsidens DD2]
          Length = 944

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 253/816 (31%), Positives = 398/816 (48%), Gaps = 78/816 (9%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           +      F LDPFQ  +   LE    VLV A T AGKT V E+A+  A  + ++  YT+P
Sbjct: 22  DFTAALGFALDPFQVAACEALEDGSGVLVCAPTGAGKTVVGEFAVHKALAEGRKAFYTTP 81

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +L Q +    VGL+TGD  ++ +A  +VMTTE+LR MLY  S  L+ + +
Sbjct: 82  IKALSNQKYNDLVQRYGADRVGLLTGDNAVNGDAPVVVMTTEVLRNMLYAESPALRGLGY 141

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+HY+ DR RG VWEE II LPP++ ++ LSAT+SNA +FA+W+  + +    VV 
Sbjct: 142 VVMDEVHYLADRFRGAVWEEVIIHLPPSVTLISLSATVSNAEEFADWLVTV-RGDTSVVV 200

Query: 246 TDFRPTPL-QHY-----VFPV------------GGSGLYLVVDEKEQFRED----NFVKL 283
           ++ RP PL QH      VF +            G S   L   E+     D     +V+ 
Sbjct: 201 SEVRPIPLWQHMLVGNRVFDLFSLRPAAHAAEQGDSPRPLSTRERGASVVDPELVRYVRE 260

Query: 284 QDTFLKQKIGGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECE 343
            +  +    G RR +     R          SD+   V+ +      P I F FSR  C+
Sbjct: 261 HERRIDSWGGDRRRDSGHRPRYRPPAR----SDV---VERLDRAGLLPAITFVFSRNGCD 313

Query: 344 Q--HAMSMSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSG 401
              H   +S L    + E+  +  +       L EED ++         L  G+A HH+G
Sbjct: 314 AAVHQCLLSGLRLTDEVERAEIAAIIDERTGSLPEEDLHVLGFWEWREGLLAGLAAHHAG 373

Query: 402 LLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYI 461
           L+P  KE VE  F  GLVKA+FATET A+G+NMPA+TVV   + KW+G++H  +  GEY 
Sbjct: 374 LVPAFKETVEECFVRGLVKAVFATETLALGINMPARTVVLERLVKWNGEAHVDVTPGEYT 433

Query: 462 QMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAE 521
           Q++GRAGRRG D  G  +++    M+ + +  +   +  PL S+FR SY   +NL+S + 
Sbjct: 434 QLTGRAGRRGIDVEGHAVVIWAPGMDPSVVAGLASTRTYPLKSSFRPSYNMAVNLVS-SF 492

Query: 522 GQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDA---SGEAEVAEYHKLKLDI 578
           G+  A  ++ +SF QFQ ++++  + +  ++ E +AA   A   S   +V  Y +L+  I
Sbjct: 493 GRARARELLASSFAQFQADRSVVGLARAAARHERDAAQSAAEMRSDRGDVGAYAQLRRQI 552

Query: 579 AQLEKKLMSEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNV----VKKPSAG 629
           A  EK+L  +     R+     L  L  G +I+V  G    G  VV++     +  P   
Sbjct: 553 ADREKELSRDSQAKRRMEAADALAALRPGDVIRVPSGRRQ-GLAVVLDPGITDLADPRPL 611

Query: 630 VGTLPSRGGGYIVPVQLPL-ISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLP 688
           V T   +  G +  V  P  +S L+++++    + R   +R+ +   ++        G  
Sbjct: 612 VLT-EDKWAGRLGSVDFPSPVSALARVKVPKNFNHRSPHSRRDLASTLRNARVEHDLGAR 670

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQL 747
           ++   +    +DP + D       L   L  HP+++  D E ++R  +R      E + L
Sbjct: 671 RIKH-RSAAADDPVLAD-------LRQALRNHPVHQLPDREERVRVAERWLRAVREAESL 722

Query: 748 KSKMRDSQIQKFRDELKNRSRVLKKLGH--------IDADGVV----------QLKGRAA 789
           +  M + +      +      VL++LG+        + AD  V             GR  
Sbjct: 723 QRTMAE-RTGSLTRQFDRTCDVLEELGYLVPEPAPLVPADTEVVGAVDDVPVVTDDGRRL 781

Query: 790 CLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFI 825
             I +  +LLV E +  G +  L   ++AA+ S  +
Sbjct: 782 ARIWSESDLLVAECLRAGVWRGLTPPELAAVVSTLV 817


>gi|400534276|ref|ZP_10797814.1| ATP-dependent DNA helicase HelY [Mycobacterium colombiense CECT
           3035]
 gi|400332578|gb|EJO90073.1| ATP-dependent DNA helicase HelY [Mycobacterium colombiense CECT
           3035]
          Length = 922

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 270/932 (28%), Positives = 447/932 (47%), Gaps = 88/932 (9%)

Query: 75  FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
           F LD FQR + A LER   VLV A T AGKT V E+A+ +A     +  YT+PLKALSNQ
Sbjct: 16  FALDGFQRRACAALERGHGVLVCAPTGAGKTVVGEFAVHLALASGGKCFYTTPLKALSNQ 75

Query: 135 KYRELHQEF-KD-VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           K+ +L   + +D +GL+TGD++++ +A  +VMTTE+LR MLY  S  L  +++V+ DE+H
Sbjct: 76  KHTDLTARYGRDRIGLLTGDMSVNADAPVVVMTTEVLRNMLYADSPALHGLSYVVMDEVH 135

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           ++ DR RG VWEE I+ LP  +++V LSAT+SNA +F  WI  + +    VV  + RP P
Sbjct: 136 FLADRMRGPVWEEVILHLPDEVRVVSLSATVSNAEEFGGWIQTV-RGDTTVVVDEHRPVP 194

Query: 253 LQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGS 312
           L  +V  VG   L L   + E+   D   ++    L+  I  RRE  + S    +  +G 
Sbjct: 195 LWQHVL-VGKRLLDLFDYDHERPAADRQPRVNPELLRH-ISHRREADRMSDWQPRRQAGR 252

Query: 313 GGSD------IFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQE 358
           GG+       +++      ++  +      P I F FSR  C+        S L   TQE
Sbjct: 253 GGAGRPSRPRLYRTPSRPDVIATLDSEGLLPAITFVFSRAGCDAAVQQCLRSPLQLTTQE 312

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E+  + +V ++    L + D  +         L RG+A HH+G+LPV +  VE LF  GL
Sbjct: 313 ERAQIAEVIEHRCGDLADADLGVLGYYEWREGLLRGLAAHHAGMLPVFRHTVEELFTAGL 372

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           V+A+FATET A+G+NMPA+TVV   + K++G+ H  +  GEY Q++GRAGRRG D  G  
Sbjct: 373 VQAVFATETLALGINMPARTVVLERLVKFNGEQHVALTPGEYTQLTGRAGRRGIDVEGHA 432

Query: 479 IIM---VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFH 535
           +++    +E  E + +  +   +  PL S+F  SY   +NL+ +  G   A  +++ SF 
Sbjct: 433 VVLWNPTEETTEPSAVAGLASTRTFPLRSSFAPSYNMTINLVQQM-GPEQAHRLLEQSFA 491

Query: 536 QFQYEKALPDIGKKVSK----LEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITR 591
           Q+Q ++++  + + + +    L+E A  L  + +A + EY +++  I+++E+   S  +R
Sbjct: 492 QYQADRSVVGLVRGIERGTAMLDEIAGELGGA-QAPILEYARMRARISEMERA-QSRASR 549

Query: 592 PERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST 651
            +R      S  L  +R G        ++N+      G+  +         P  L L   
Sbjct: 550 LQR--RQAASDALAALRRGD-------IINITHGRRGGLAVVLESARDSSDPRPLVLTEN 600

Query: 652 LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQ--------------GLPKLNPVK--- 694
               R+S   D     A    +   + +E R P+              GL   +  +   
Sbjct: 601 RWAGRIST-ADYSGASAPVGSMSLPKRVEHRQPRVRRDLASALRSAAAGLTIPSRHRGGR 659

Query: 695 ---DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSK 750
              D    DPE+  L  Q+         HP + +   E Q+R  +R   +  +  QL+ K
Sbjct: 660 GDTDGAFHDPELASLREQLRR-------HPSHNTPGLEAQVRQAERYLRIERDNAQLEKK 712

Query: 751 M--RDSQIQKFRDELKNRSRVLKKLGHI---DADGVVQLKGRAACLIDTGDELLVTELMF 805
           +    + + +  D +     +L + G I   D D  V   GR    I +  +LLV E + 
Sbjct: 713 VAAATNSLARTFDRIVG---LLTERGFIEGRDGDPRVTDDGRLLARIYSESDLLVAECLR 769

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
            G ++ L   ++AA+ S  +   +  E          P Q ++++ ++ + +    + + 
Sbjct: 770 TGAWSGLKPAELAAVVSSVLYETRGGEGPGAGFAADAPTQPVRQALQQTSRLSMALRADE 829

Query: 866 NVDEYVESTVRP--FLMDVIYCWSKGATFAEVIQM-------TDIFEGSIIRSARRLDEF 916
                  S   P    ++VIY W++ A  A  +         + +  G  +R  R+  + 
Sbjct: 830 QTHRIAPSR-EPDDGFVNVIYRWARTADLAAALAAADPAGTGSPLLAGDFVRWCRQALDL 888

Query: 917 LNQLRAAAQAVGEVNLEKKFAAASESLRRGIM 948
           L+Q+R AA    +  L      A   +RRG++
Sbjct: 889 LDQVRNAAP---DAELRATAKRAINDIRRGVV 917


>gi|116073712|ref|ZP_01470974.1| putative DNA helicase [Synechococcus sp. RS9916]
 gi|116069017|gb|EAU74769.1| putative DNA helicase [Synechococcus sp. RS9916]
          Length = 924

 Score =  333 bits (854), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 276/902 (30%), Positives = 429/902 (47%), Gaps = 95/902 (10%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++ + + F LD FQ  ++  L +  SV+VSA T +GKT V EYAI  A    Q+V YT+P
Sbjct: 18  DLNQLFPFPLDDFQLEAIDALNQGHSVVVSAPTGSGKTLVGEYAIHRAIAHGQKVFYTTP 77

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLY----RGSEVLK 181
           LKALSNQK R+  ++F  ++VGLMTGD++++  A  +VMTTEI R MLY     G++ L 
Sbjct: 78  LKALSNQKLRDFREQFGAENVGLMTGDLSVNREARVVVMTTEIFRNMLYAEAEEGNDPLA 137

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
           +V  V+ DE HYM D +RG VWEESII  PP++++V LSAT++NA Q  +WI  +H  P 
Sbjct: 138 DVEAVVLDECHYMNDSQRGTVWEESIIHCPPSVQLVALSATVANAGQLTDWIERVHG-PT 196

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKA 301
            +V +DFRP PLQ + F     GL+ +++E       N           K+    +  K 
Sbjct: 197 RLVLSDFRPVPLQ-FSF-CSAKGLHPLLNEAGTGLHPNC----------KVWRAPKGHKR 244

Query: 302 SGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQEEKD 361
            GR  K          F + +M  ER   P I F FSRR C++    +      T EE+ 
Sbjct: 245 KGRSPKPPQPEAPPISFVVAQM-AERAMLPAIYFIFSRRGCDKAVRDLGVQCLVTAEEQA 303

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            +    +       E  R+     L    L RGIA HH+G+LP  KEL+E LFQ+GLVK 
Sbjct: 304 RIAARLKAYTAANPEAVRD----GLHADALLRGIAAHHAGVLPAWKELIEELFQQGLVKV 359

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +FATET A G+NMPA++ V  ++ K     HR + + E++QM+GRAGRRG D +G  ++ 
Sbjct: 360 VFATETLAAGINMPARSTVIASLSKRTERGHRPLMASEFLQMAGRAGRRGLDSKGY-VVT 418

Query: 482 VDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYE 540
           V  + E       +   PA PLVS F  SY  +LNL++R +    A  +++ SF ++   
Sbjct: 419 VQSRFEGVREAGQLATSPADPLVSQFTPSYGMVLNLLARHD-LAKARELVERSFGRYLAS 477

Query: 541 KALPDIGKKVS-KLEEEAASLDASGEAEVAEYHKLKLDIA--------------QLEKKL 585
             L +  + ++    +       SG+    ++   +                  Q E+ L
Sbjct: 478 LDLVEEEEILTQLRLQLGQLQGTSGDVPWEDFEDYEKRRGRLREERRLLRILQQQAEETL 537

Query: 586 MSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP------SRGGG 639
            +E+T     L +   G L+ ++        GV   V+     G G  P           
Sbjct: 538 ANELT---LALQFASVGTLVSLK--APQLRGGVTPAVIVDKLDGPGQFPLLLCLTQENVW 592

Query: 640 YIVPVQ--LPLISTLSKIRLS--VPPDL-RPLDARQ------SILLAVQELESRFPQGLP 688
            +VP Q  + L + LS +++     PDL R  + R        + LAV  +  R     P
Sbjct: 593 LLVPCQAVVSLHAELSCLQVDGVTTPDLHRAGELRHGDQQSGGLALAVAHMAQRHDMTTP 652

Query: 689 KLNPVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKA-EVNHEI--- 744
           + +          EV+     ++ELE  L  HP ++  D  Q++  +R+  E+  EI   
Sbjct: 653 QYDLAG-------EVLSQARLVKELEDDLETHPAHRWGDRRQLKKHRRRMEELEIEISER 705

Query: 745 QQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELM 804
           QQL     +   + F   ++    +L+  G +D     ++ GR    +   +EL +   +
Sbjct: 706 QQLLHHRANRHWEIFLALIE----ILQHFGCLDELQPTEI-GRTVAALRGDNELWLGLAL 760

Query: 805 FNGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKP------LQQLQESARKIAEIQ 858
            +G  +DL     A LA+ F  +     + +L      P      L  L    R++   Q
Sbjct: 761 MSGHLDDL---PPAELAAVFEAISTEVNRPDLWSGFPPPPRAEEALHDLMGIRRELLRAQ 817

Query: 859 NECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLN 918
             C +       V +   P LM ++  W+ G  + ++I  T + EG ++R  RR  + L 
Sbjct: 818 ERCNV------VVPAWWEPELMGLVEAWANGCAWNDLIANTSLDEGDVVRIMRRTVDLLA 871

Query: 919 QL 920
           Q+
Sbjct: 872 QV 873


>gi|319949284|ref|ZP_08023364.1| DEAD/DEAH box helicase [Dietzia cinnamea P4]
 gi|319437074|gb|EFV92114.1| DEAD/DEAH box helicase [Dietzia cinnamea P4]
          Length = 886

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 273/918 (29%), Positives = 444/918 (48%), Gaps = 97/918 (10%)

Query: 75  FELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSNQ 134
           F  DPFQ  + A L+   ++LVSA T +GKT V EYA   A     R  YT+P+KALSNQ
Sbjct: 23  FAPDPFQLEAFAALDAGRNLLVSAPTGSGKTLVGEYAAYRALAGGGRCFYTTPVKALSNQ 82

Query: 135 KYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEIH 192
           K+R+  + F  ++VGL+TGD ++  +A  +VMTTE+LR M+Y  S  L ++  V+ DEIH
Sbjct: 83  KFRQFRERFGPENVGLLTGDHSIDADAPIVVMTTEVLRNMIYSASSALHDLDCVVMDEIH 142

Query: 193 YMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPTP 252
           Y+ DR RGVVWEE I+ L PA+ +V LSAT+SN  +  +WI  +      VV ++ RP P
Sbjct: 143 YLGDRSRGVVWEEIILTLDPAVLLVGLSATLSNTDELGDWITEIRGDTA-VVLSEHRPVP 201

Query: 253 LQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKASGRMAKGGSGS 312
           L H ++  G     LV            V+      ++   G  +   AS   A+     
Sbjct: 202 LAHMLYTDGD----LVP-----------VRAAADQRRRARSGYHDERMASRPRAQWARRQ 246

Query: 313 GGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEKDTVEQVFQNA 370
                  +++ + +    P I F FSR  C+     M  ++L   T EE   +     +A
Sbjct: 247 ------DVIERLDDEHLLPAIYFVFSRAGCDGAVAQMRRARLRLTTGEEARRIASHVDSA 300

Query: 371 VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
           V  + + D +          L  G+A HH+G+LP+ + +VE LF  GL+K +FATET A+
Sbjct: 301 VAQVPQPDLDALDFAAFRAGLVNGLAAHHAGMLPLFRTIVEELFSAGLIKVVFATETLAL 360

Query: 431 GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT 490
           G++MPA+ VV     K++GD+H  + S EY Q++GRAGRRG D +G  +++ D+      
Sbjct: 361 GIHMPARAVVLEKTTKFNGDTHMMLTSAEYSQITGRAGRRGIDTKGTAVVL-DQPDLDLD 419

Query: 491 LKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKK 549
               ++  P  PL S F   Y   +NL+ +  G   A  +I  SF QFQ ++ L    + 
Sbjct: 420 ALAALVDTPRFPLHSAFTPDYSMAVNLVEQL-GVEEATTLIGRSFAQFQTDRTLVSRSRA 478

Query: 550 VSKLEEE----AASL-DASGEAEVAEYHKLKLDIAQLEKKLMSEITRPERVLYYLGSGRL 604
           + +  +E     ASL +A G+A++ EY  L+ ++++LE+K   + TR +         RL
Sbjct: 479 IERRSDERDRMRASLEEAGGDADLDEYMGLRAELSRLERK-AEKATRDD---------RL 528

Query: 605 IKVREGGTDWGWGVVVNVVKKPSAGVGT-LPSRGGGYIVPVQLPLIST-----LSKIRLS 658
             VR        G V+ V +K    V T L  R      P  L L  T     L +   +
Sbjct: 529 DSVRSAMLKQTAGSVITVGRKRFGMVATVLQVRTDIPSDPALLCLTDTGWTGWLRQHDFA 588

Query: 659 VPP------DL----RPLDARQSILLAVQELESRFPQGLPKLNPVKDMKI-EDPEVVDLV 707
            PP      DL    R LD R    L VQ +E    +   ++       + +DP +    
Sbjct: 589 APPVPVGRVDLPRGRRKLDGRAKRAL-VQRMEHLRGKAKGRMKNAGGKSVRKDPRIAAAR 647

Query: 708 NQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKM---RDSQIQKFRDEL 763
             + +       HPL+     +++ R  +R A  + ++  L +++    DS  ++FR  +
Sbjct: 648 RALRQ-------HPLHDDPRIDKLARLHERWARADADVAALTAEVDADADSLARRFRRIV 700

Query: 764 KNRSRVLKKLGHID-ADGVVQLK--GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAAL 820
                +L+ LG+++  DGV++    G     + T  +L V E +  G +  LD   +AA+
Sbjct: 701 D----LLRHLGYLEKVDGVLRATDAGHLLAGVHTEQDLFVAECLRRGVWRGLDAAGLAAV 756

Query: 821 ASCFIPVDKSSEQINLRME--LAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
            +  +   ++   I    +  L   L + +  A  +AE++   +L    D  +++ + P 
Sbjct: 757 IATIVAHPRTDSAIREPSDEVLRSALAETERVAADVAEVERAHRLPTTPD--LDAGLAP- 813

Query: 879 LMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
              V++ W  G   A ++  +     ++  G  +RSAR + + L Q+      V E +L 
Sbjct: 814 ---VLHHWVSGGALASILAASWQEGVELTAGDFVRSARLVVDVLAQV----GQVAEPDLA 866

Query: 934 KKFAAASESLRRGIMFSN 951
           +   +A  SLRRG++  +
Sbjct: 867 RTARSAVGSLRRGVVLDH 884


>gi|452912070|ref|ZP_21960727.1| putative helicase [Kocuria palustris PEL]
 gi|452832771|gb|EME35595.1| putative helicase [Kocuria palustris PEL]
          Length = 957

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 275/933 (29%), Positives = 456/933 (48%), Gaps = 99/933 (10%)

Query: 64  VYNGEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVI 123
            Y    A +  FELD FQ      LE    VLV+A T AGKT V E+A+ +A    Q+  
Sbjct: 12  TYRSRFAASLDFELDDFQIEGCRALEEGRGVLVAAPTGAGKTVVGEFAVDLALHRGQKAF 71

Query: 124 YTSPLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLK 181
           YT+P+KALSNQK+ +  + F  + VGL+TGD +++  A  +VMTTE+LR MLY  S  L 
Sbjct: 72  YTTPIKALSNQKHSDFVRRFGAERVGLLTGDTSINSEADVVVMTTEVLRNMLYADSPTLS 131

Query: 182 EVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPC 241
            + +V+ DE+HY+ DR RG VWEE II LPP ++M  LSAT+SNA +F +W+  +  +  
Sbjct: 132 NLGFVVMDEVHYLADRFRGAVWEEVIIHLPPHVQMACLSATVSNAEEFGDWLGTVRGE-T 190

Query: 242 HVVYTDFRPTPLQHYVFPVGGSGLYL-VVDEKEQFRE--DNFVKLQDTFLKQKIGG---- 294
            VV ++ RP PL  ++  VG   + L V D  EQ  E  +   + ++  L+ +I      
Sbjct: 191 DVVVSEHRPVPLWQHM-QVGTELMDLFVTDTVEQAAEKAERLERAREAGLEARIEPPAVN 249

Query: 295 -------------------------RREN------------GKASGRMAKGGSGSGGSDI 317
                                    R++N            G+ SGR  +GGS      I
Sbjct: 250 PELLHLARSQASGRRGPGGRSRERMRQKNGRGRGGHGRDDRGRGSGRDDRGGS------I 303

Query: 318 FKIVKMIMERKFQ-----PVIVFSFSRRECEQHAMS--MSKLDFNTQEEKDTVEQVFQNA 370
            +I +  + R+ Q     P I F FSR  C+        + L   T+ E+ T+  V   A
Sbjct: 304 PRISRPHLLRQLQSEGLLPAITFIFSRAGCDDAVTQCLAADLQLTTEAERRTIRAVTAEA 363

Query: 371 VDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAM 430
              LN+ D ++         L  G+A HH+GLLP+ KE+VE LF +GL+KA+FATET A+
Sbjct: 364 AASLNDVDLDVLGFRQWRDGLLHGVAAHHAGLLPLFKEVVEELFTQGLIKAVFATETLAL 423

Query: 431 GLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNT 490
           G+NMPA++VV   + K++G++   I  GEY Q++GRAGRRG D  G  +++     +   
Sbjct: 424 GINMPARSVVLERLDKFNGEARVDITPGEYTQLTGRAGRRGIDVEGHAVVLWRPGSDPQA 483

Query: 491 LKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKV 550
           +  +   +  PL S+FR +Y   +NL+++   Q T   ++++SF QFQ ++++  I ++V
Sbjct: 484 VAGLASKRTYPLNSSFRPTYNMSVNLIAQFGAQRT-RGILESSFAQFQADRSVVGIAREV 542

Query: 551 SKLEEEAASLDASGE---AEVAEYHKLKLDIAQLEK---KLMSEITRPERV--LYYLGSG 602
            + +E  A  + S      +  EY  L+ ++   EK   K  S   R E    L  L  G
Sbjct: 543 RRNQEALAGYEESMTCHLGDFTEYAALRRELKDTEKSAEKARSHARRTEAAASLQDLLPG 602

Query: 603 RLIKVREGGTDWGWGVVVNV---VKKPSAGVGTLPS---RGGGYIVPVQLPLISTLSKIR 656
            ++ +   G + G+ VVV+      +P   + T  +   R G     ++ PL   +S+IR
Sbjct: 603 DVVDI-PTGRNRGFAVVVSPDPHSPQPRPSIVTHDAHLRRLGAQ--DLEGPL-EPISRIR 658

Query: 657 LSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPEVVDLVN----QIEE 712
           L     +  L  R+ I  A   + S   +G+P   P    + + P      +    +I E
Sbjct: 659 LPKRIAVSSLKERKVISGA---MRSALQEGVP---PRTGGRSDQPRFARGGSGSEARITE 712

Query: 713 LEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKMRDSQIQKFRDELKNRSRVLK 771
           L  +L  HP +   D E   R  +R   +  E  +L  ++ D +           + VL 
Sbjct: 713 LRRRLREHPCHGCSDREQHARWAERWERLRRETDRLMRQL-DGRTNAVAARFDRITSVLH 771

Query: 772 KLGHID-ADGVVQLK--GRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVD 828
           +L +++  D  ++L   G++   I    +LL+   + +G  + LD   +AA+A+ F    
Sbjct: 772 ELDYLERRDDELRLTPAGQSLRRIYGDRDLLLAMGLRDGILDGLDPASIAAVATVFTYQA 831

Query: 829 KSSEQ-INLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYVESTVRPFLMDVIYCWS 887
           K  +     R+  AK  Q +  +      +  + + +  VD+  E  +   ++  ++ W+
Sbjct: 832 KRQDAGARPRLPSAKIEQAVATAVTHWTRL-TDLEEQHRVDQTAEPEL--GMVGPMHRWA 888

Query: 888 KGATFAEVIQMTDIFEGSIIRSARRLDEFLNQL 920
           +G +    ++ T++  G  +R  +++ + L+Q+
Sbjct: 889 RGGSLRATLEDTELAAGDFVRWTKQVIDLLDQV 921


>gi|294876453|ref|XP_002767677.1| helicase, putative [Perkinsus marinus ATCC 50983]
 gi|239869438|gb|EER00395.1| helicase, putative [Perkinsus marinus ATCC 50983]
          Length = 263

 Score =  333 bits (853), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 149/263 (56%), Positives = 195/263 (74%), Gaps = 1/263 (0%)

Query: 114 MAFRDKQRVIYTSPLKALSNQKYRELHQEF-KDVGLMTGDVTLSPNASCLVMTTEILRGM 172
           M+ RD QRVIYTSP+KALSNQKYR+L  EF  DVGLMTGDVT++PNASC++MTTEILR M
Sbjct: 1   MSMRDNQRVIYTSPIKALSNQKYRDLADEFGSDVGLMTGDVTINPNASCMIMTTEILRSM 60

Query: 173 LYRGSEVLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEW 232
           LYRGS+V +EV WVIFDE+HYM+DR+RGVVWEE++I LP  ++ VFLSAT+ NA +FAEW
Sbjct: 61  LYRGSDVCREVKWVIFDEVHYMRDRDRGVVWEETMILLPDTVRFVFLSATIPNAREFAEW 120

Query: 233 ICHLHKQPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKI 292
           IC +  QPCH++YTD+RP PLQHYV+P  G G+YL VDEK +FREDN+ K  +   K   
Sbjct: 121 ICRIKHQPCHLIYTDYRPVPLQHYVYPSMGDGVYLTVDEKGKFREDNYGKAVEILEKNTE 180

Query: 293 GGRRENGKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKL 352
              +          K    +  SD+ K+V+M  +R + PVIVF+FS++ECEQ+A+ +  +
Sbjct: 181 QASQSTKGLKSNKKKQQQHTKNSDLLKVVRMCSDRAYLPVIVFAFSKKECEQNALVLRNI 240

Query: 353 DFNTQEEKDTVEQVFQNAVDCLN 375
           D  TQ+EK  +  VF+NA+  L+
Sbjct: 241 DLVTQDEKALIGDVFENAMATLS 263


>gi|145594787|ref|YP_001159084.1| DSH domain-containing protein [Salinispora tropica CNB-440]
 gi|145304124|gb|ABP54706.1| DSH domain protein [Salinispora tropica CNB-440]
          Length = 935

 Score =  332 bits (852), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 278/926 (30%), Positives = 458/926 (49%), Gaps = 80/926 (8%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRD-------KQ 120
           E A     +LD FQR +   LER   VLV A T AGKT V E+A+ +A R        ++
Sbjct: 39  EFALDLGVDLDDFQREACQALERGSGVLVCAPTGAGKTVVGEFAVHLALRGGTSADTGRR 98

Query: 121 RVIYTSPLKALSNQKYREL--HQEFKDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSE 178
           +  YT+P+KALSNQKY +L        VGL+TGD  ++ +A  +VMTTE+LR MLY GS 
Sbjct: 99  KCFYTTPIKALSNQKYHDLVDRHGADQVGLLTGDNAINGDAPVVVMTTEVLRNMLYAGSA 158

Query: 179 VLKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHK 238
            L+ +A+V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +FA+W+  +  
Sbjct: 159 TLEGLAYVVMDEVHYLADRFRGGVWEEVIIHLPASVTLVSLSATVSNAEEFADWLVTVRG 218

Query: 239 QPCHVVYTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKL----QDTFLKQKIGG 294
           +   VV ++ RP PL  ++  VG     L  D     + D   +L    +DT        
Sbjct: 219 E-TEVVVSEHRPVPLWQHML-VGRRMFDLFHDADAARKHDVHPELLRYTRDTLR------ 270

Query: 295 RRENGKASGRMAKGGSGSGGSDIFK--IVKMIMERKFQPVIVFSFSRRECE---QHAMSM 349
           R E+G+  G    G  G       +  IV  +      P I+F FSR  C+   Q  ++ 
Sbjct: 271 RLESGEGRGAGPGGRRGPRWRGPMRPDIVDRLDREGLLPAILFIFSRAGCDAAVQQCLA- 329

Query: 350 SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKEL 409
           + L     EE+  + +V ++ +  +  ED ++      L  L+RG+A HH+G+LP  KE+
Sbjct: 330 AGLRLTGPEERAEIRRVVESRITTIPGEDLSVLGYWDWLDGLERGLAAHHAGMLPAFKEV 389

Query: 410 VELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGR 469
           VE LF  GLVKA+FATET A+G+NMPA+ VV   + K++G++H  +  GEY Q++GRAGR
Sbjct: 390 VEELFVRGLVKAVFATETLALGINMPARCVVLERLVKYNGEAHVDLTPGEYTQLTGRAGR 449

Query: 470 RGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHV 529
           RG D  G  +++   + +   +  +   +  PL S+FR SY   +NL+  + G   A  +
Sbjct: 450 RGIDVEGHAVVVWSPETDPRHVAGLASTRTYPLRSSFRPSYNMAVNLVG-SVGAEPARAL 508

Query: 530 IKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVAE---YHKLKLDIAQLEKKLM 586
           +++SF QFQ ++++  + ++V +  E   +  A    +  +   Y  +++ IA  E++L 
Sbjct: 509 LESSFAQFQADRSVVGLARQVQRNTETVQAYGAEAACQHGDFDAYFAIRVAIADRERELA 568

Query: 587 SEITRPERV-----LYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVG------TLPS 635
            +     +      L  L  G +I+V  G      G+ V V+   +AG G          
Sbjct: 569 RQGQSQRKAAAVVSLERLRVGDVIRVPSGRRA---GLAV-VLDPAAAGFGEPRPLVLTQD 624

Query: 636 RGGGYIVPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
           R  G + P      +  L++IR+    + R   AR+ +  AV         GL +    +
Sbjct: 625 RWAGRVGPGDFTTPAEVLTRIRVPKHFNHRSPAARRDLAAAVSG------TGLNRHGGRR 678

Query: 695 DMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM-- 751
             +       D  +++ +L  +L  HP +   + E   R  +R+  +  + Q+L+ ++  
Sbjct: 679 GGRSRRGAGED--DRLVQLRAELRRHPCHACPEREEHARWAERRRRLEKDTQELRQRVTG 736

Query: 752 RDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFND 811
           R   + +  D +     +L   G++ +DG V   GR    I T  +LLV E +  G ++ 
Sbjct: 737 RTGSLARTFDRIVA---LLTARGYLASDGGVTDAGRMLSRIWTEADLLVAECLRRGVWSG 793

Query: 812 LDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEVNVDEYV 871
           L   ++AA  S  + V ++   ++ R  L  P   +  +  +  ++      E+  DE  
Sbjct: 794 LSPAELAAAVS--VVVFEARRDVDERASL--PRGAVATAVDETLKLWG----EIEADEAA 845

Query: 872 ES---TVRPFLMDV--IYCWSKGATFAEVIQMTDIF----EGSIIRSARRLDEFLNQLRA 922
           +    T  P L     +Y W++G   A+V+    I      G  +R AR++ + L QL  
Sbjct: 846 QGLTVTREPDLGFAWPVYRWARGEPLAKVLVSGHIDGEMPAGDFVRWARQVVDLLGQLAD 905

Query: 923 AAQAVGEVNLEKKFAAASESLRRGIM 948
           +  A  E+    + A    ++ RG++
Sbjct: 906 SGGASAELRSTARQAIV--AVNRGVL 929


>gi|312139730|ref|YP_004007066.1| dead/deah box helicase [Rhodococcus equi 103S]
 gi|311889069|emb|CBH48382.1| putative DEAD/DEAH box helicase [Rhodococcus equi 103S]
          Length = 898

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 267/895 (29%), Positives = 429/895 (47%), Gaps = 81/895 (9%)

Query: 74  SFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALSN 133
           SF LDPFQ  + A LE    VLV A T AGKT V E+A+ +A    ++  YT+P+KALSN
Sbjct: 15  SFPLDPFQLEACAALEAGHGVLVCAPTGAGKTVVGEFAVHLALESGRKCFYTTPIKALSN 74

Query: 134 QKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDEI 191
           QK+ EL   +    VGL+TGD +++ +A  +VMTTE+LR MLY  S  L+ ++ V+ DE+
Sbjct: 75  QKFNELSARYGSDAVGLLTGDTSINSDAPVVVMTTEVLRNMLYADSPTLRGLSHVVMDEV 134

Query: 192 HYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRPT 251
           HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F  W+  +      +V  + RP 
Sbjct: 135 HYLADRFRGAVWEEVILHLPEDVRLVSLSATVSNAEEFGAWMETVRGD-TTIVVDETRPI 193

Query: 252 PLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFL---KQKIGGRRENGKASGRMAKG 308
           PL  ++    G  L+ + D K      + V +    +   KQ++   R N          
Sbjct: 194 PLSQHILV--GRRLFDLFDAKAAAGASHQVVVDPDLVRHVKQRLALDRMNS-----WEPR 246

Query: 309 GSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDFNTQEEK 360
           G G   S+ F+      ++  + E    P I F FSR  CE        SKL   T E+ 
Sbjct: 247 GRGGYRSNDFRPLPRPEVIARLDEEGLLPAITFIFSRAGCEAALAQCVRSKLRLTTPEQT 306

Query: 361 DTVEQVFQNAVDCLNEEDRNLPAIELML-------PLLKRGIAVHHSGLLPVIKELVELL 413
             + ++       ++E  R+LP  +L +         L+RG A HH+G+LP  KE VE L
Sbjct: 307 ARIREI-------IDEHTRHLPRPDLEVLGYWSWREALERGFAAHHAGMLPAFKETVEEL 359

Query: 414 FQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKD 473
           F  GLV+A+FATET A+G+NMPA++VV   + K++GD+H  +  GEY Q++GRAGRRG D
Sbjct: 360 FVNGLVRAVFATETLALGINMPARSVVLERLVKYNGDTHAELTPGEYTQLTGRAGRRGID 419

Query: 474 DRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNS 533
             G  +++    +E   +  +   +  PL S+FR  Y   +NL+ R  G   +  +++ S
Sbjct: 420 VEGHAVVLWQPGVEPTDVAGLASTRTFPLRSSFRPGYNMSINLVDRM-GAVESRALLERS 478

Query: 534 FHQFQYEKALPDIGKKVSKLEEEAASL-DASGEAEVA--EYHKLKLDIAQLEKKLMSEIT 590
           F QFQ ++++  + + + + E     L D  G A+    EY +++  +   E+ L  +  
Sbjct: 479 FAQFQADRSVVGLTRSIERNEAALTDLRDKLGCADGGYFEYFRIREQLRSRERMLERQ-G 537

Query: 591 RPERVLYYLGSGRLIKVREG-------GTDWGWGVVVNVVKKPS--AGVGTLPSRGGGYI 641
           R +R    + S  L+ +R G       G   G  VV+   + P+    +     +  G +
Sbjct: 538 RADRRGASVSS--LVDLRRGDVVAIPVGKRSGLAVVLEPDQNPNDPRPLVLTEDKWAGRV 595

Query: 642 VPVQLPLIS-TLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIED 700
                P+ + +L K+RL    D R    R+ +  A++      P   PK         ED
Sbjct: 596 SAADFPVPARSLGKLRLPRHVDHRTARVRRDLASALRS-TGIVPPRRPKRGKAGR---ED 651

Query: 701 PEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQL--KSKMRDSQIQ 757
            E V L   + +       HP +   D  Q+ R  +R   +  E + L  KS    + + 
Sbjct: 652 SEAVALRKALRD-------HPCHSRPDREQLSRIGERYNRLARETESLRQKSAATTNSLA 704

Query: 758 KFRDELKNRSRVLKKLGHIDA--DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHH 815
           +  D +     +L + G I A  D     +G+    I +  +LLV E +  G +  L   
Sbjct: 705 RTFDRIVA---LLTERGFISAGPDPKATEEGQRLARIYSESDLLVAECLRRGAWKGLTPA 761

Query: 816 QVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQ-NECKLEVNVDEYVEST 874
           ++A + S  +   +       R   A   Q L E+ R    +Q +E + ++ V    +S 
Sbjct: 762 ELAGVVSSVVYESRQDADAPDRGPTAPLRQALAETMRVWGSLQADEIRHKLPVTREPDSG 821

Query: 875 VRPFLMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAA 924
                +  IY W+      +V+        ++  G  +R  R++ + L+Q+ A A
Sbjct: 822 ----FVTAIYQWANDEPLVDVLVAAGSGGKELAAGDFVRWCRQVIDLLDQVHATA 872


>gi|296139877|ref|YP_003647120.1| DEAD/DEAH box helicase [Tsukamurella paurometabola DSM 20162]
 gi|296028011|gb|ADG78781.1| DEAD/DEAH box helicase domain protein [Tsukamurella paurometabola
           DSM 20162]
          Length = 917

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 268/903 (29%), Positives = 435/903 (48%), Gaps = 75/903 (8%)

Query: 69  MAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPL 128
            A+   F LDPFQR   A LE    VLV A T AGKT V E+A+ +A     +  YT+P+
Sbjct: 9   FAERLDFTLDPFQRDGCAALENGHGVLVCAPTGAGKTVVGEFAVHLALAGGTKCFYTTPI 68

Query: 129 KALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWV 186
           KALSNQK+ EL   +    VGL+TGD +++ +A  +VMTTE+LR MLY  S  L  ++ V
Sbjct: 69  KALSNQKHAELVARYGADKVGLLTGDTSINSHAPVVVMTTEVLRNMLYADSPTLDGLSHV 128

Query: 187 IFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYT 246
           + DE+HY+ DR RG VWEE I+ LP  +++V LSAT+SNA +F  WI  + +    V+  
Sbjct: 129 VMDEVHYLADRFRGAVWEEVILHLPADVRLVSLSATVSNAEEFGAWITEV-RGDTTVIVD 187

Query: 247 DFRPTPL-QHYVFPVGGSGLYLVVDEK-----EQFREDNFVKLQDT---FLKQK--IGGR 295
           + RP PL QH +    G  L+ + D +     ++    N + L      ++KQ+  +   
Sbjct: 188 EKRPVPLWQHMLV---GRRLFDLFDTRALRASQESGGKNALVLDAALVRYVKQRESLDRS 244

Query: 296 RENGKAS--GRMAKGGSGSGGSDIF---KIVKMIMERKFQPVIVFSFSRRECEQHAMSM- 349
           R+ G  S  GR A  G            +++ ++      P I F FSR  CEQ      
Sbjct: 245 RDPGIVSPTGRRAGRGRPQATRRPIPRPEVIALLDAEGLLPAITFVFSRAGCEQALTQCL 304

Query: 350 -SKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKE 408
            S +   TQ++   +  +    V   +  D  L   E     L RG A HH+G+LP  + 
Sbjct: 305 RSPVVLTTQDQAAEIGAIIDKHVAEFSPADLELLGFEEWRAALTRGFAAHHAGMLPAFRH 364

Query: 409 LVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAG 468
            VE LF +GLV+A+FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAG
Sbjct: 365 AVEELFVKGLVRAVFATETLALGINMPARTVVLERLVKFNGETHNELTPGEYTQLTGRAG 424

Query: 469 RRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEH 528
           RRG D  G  +++    +    +  +   +  PLVS+F   Y   +NL+ R  G+  AE 
Sbjct: 425 RRGIDVEGHAVVLWQTGVRPQEVAGLAGARTFPLVSSFTPGYNMSINLVDRL-GRAGAER 483

Query: 529 VIKNSFHQFQYEKALPDIGKKVSKLEEEAASL-----DASGEAEVAEYHKLKLDIAQLEK 583
           +++ SF QFQ ++++  + K+V + E+E   L     DA+G A+  EY +L+  +   E+
Sbjct: 484 LLEASFAQFQADRSVVGLAKRVQRGEKELDQLRAQITDAAGGADYLEYVRLREAVRSRER 543

Query: 584 KLMSEITRPER-----VLYYLGSGRLIKVREGGTDWGWGVVVNVV---KKPSAGVGT--- 632
            L  +     R      L  L  G ++ V  GG   G  +VV      + P   V T   
Sbjct: 544 SLRRQHLSDRRDGAATALGELRRGDVVAV-TGGKRRGLALVVEPSGDRRDPKPVVVTESG 602

Query: 633 LPSRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNP 692
              R G       LP++ TL   R+    D R    ++ +   ++        G+    P
Sbjct: 603 WSGRVGASDFVGDLPVLGTL---RVPKNADYRSGRGKRDLASTLRN------SGISA--P 651

Query: 693 VKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKM 751
            +  K   P   D   ++ +L  ++ AHP +  Q   ++ R  +R A +  E     + +
Sbjct: 652 RQQAKAARPAATD--GELADLRAQMRAHPAHTGQRAAELDRLAERYARLERETTAAAATV 709

Query: 752 RDS------QIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           R +        ++    L +R      L  +D D V+   G     + +  +LLV E + 
Sbjct: 710 RATTSSLAVTFERIVALLDDRG----YLETVDGDVVLTEAGHRLARVYSESDLLVCECIE 765

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNECKLEV 865
           +G F+ L   ++AA+ S  +  +   ++    +   +    ++ + R IA+   +  +  
Sbjct: 766 DGVFDGLAPAELAAVVSAMV-FESRGDRGGAILTGERVPGGVRSAVRDIADRWTDI-VAA 823

Query: 866 NVDEYVESTVRPFLMDV--IYCWSKGATFAEVI-----QMTDIFEGSIIRSARRLDEFLN 918
                +E +  P +  V  +Y W+ G T A  +     +   +  G  +R  R++ + L+
Sbjct: 824 EAAHRLEPSREPDVGFVAPMYQWAGGGTLAATLIAAGERGQPLPAGDFVRWCRQVIDLLD 883

Query: 919 QLR 921
           Q+R
Sbjct: 884 QIR 886


>gi|443317292|ref|ZP_21046707.1| superfamily II RNA helicase [Leptolyngbya sp. PCC 6406]
 gi|442783111|gb|ELR93036.1| superfamily II RNA helicase [Leptolyngbya sp. PCC 6406]
          Length = 908

 Score =  332 bits (852), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 277/923 (30%), Positives = 438/923 (47%), Gaps = 118/923 (12%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++A+ + F LD FQ  +V  L+  +SV+V A T +GKT + EYAI  A  + +RV YT+P
Sbjct: 3   DLAELFPFPLDKFQLDAVHALDEGKSVVVCAPTGSGKTLIGEYAIHRALANGKRVFYTTP 62

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLY--RGSEV---L 180
           LKALSNQK R+  ++F    VGL+TGD  ++ +A  +VMTTEI R MLY  R  EV   L
Sbjct: 63  LKALSNQKLRDFREQFGFDQVGLLTGDTAINRDAPVVVMTTEIFRNMLYGTRIGEVGTSL 122

Query: 181 KEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQP 240
           ++V  V+ DE HYM DR+RG VWEESII+ PP I+++ LSAT+ N  Q  +W+  +H  P
Sbjct: 123 QDVEAVVLDECHYMNDRQRGTVWEESIIYCPPEIQLLALSATVENGDQLTDWLSKVHG-P 181

Query: 241 CHVVYTDFRPTPLQ-HYVFPVG-GSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN 298
             ++Y+ FRP PL  HY    G G G  L  D+KE              LK+    +R  
Sbjct: 182 TELIYSTFRPVPLDFHYCNGKGPGLGPLLDADQKEMH----------PILKKH---QRRR 228

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
              SGR  +      G  +  ++  + +R   P I F FSRR C++    +       + 
Sbjct: 229 QPQSGRRDR----RDGVSLQYVLSQLQQRDMLPAIYFIFSRRGCDRAVNEIGDFSLVNEA 284

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E   ++ +  + +    E  R+       +  L RGIA HH+G+LP  K LVE LFQ+GL
Sbjct: 285 EAAQLKGIIDDFLKHSPEAARSG-----QVDPLYRGIAAHHAGILPAWKGLVEELFQQGL 339

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           +K +FATET A+G+NMPA+T V   + K     HR + + E++QMSGRAGRRG D+RG  
Sbjct: 340 IKVVFATETLAVGINMPARTTVIANLSKRTDSGHRLLMASEFLQMSGRAGRRGMDERG-N 398

Query: 479 IIMVDEQME-MNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           ++ V+   E       +    P PLVS F  SY  +LNL+ +      A  +I+ SF Q+
Sbjct: 399 VVTVETPFEGAKEAVYLATVGPDPLVSQFTPSYGMVLNLL-QTHNLEEARELIERSFGQY 457

Query: 538 QYE-KALPD---IGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKLMSEITRPE 593
                 LP    I      LE + A L    EA +A Y K++  + + EK+L+  + +  
Sbjct: 458 LATLHLLPQQQAIAALKDTLEHQRAQLVGFDEAVLAAYEKVREHLRE-EKRLLKILQQQA 516

Query: 594 RVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGG-------------- 639
             L     G  +     GT          V  P   V    ++G G              
Sbjct: 517 AELLLGDMGAALAFAIAGTILSLKGKHIPVADPIPAVLVTKAQGSGQFPYLVCLTQANQW 576

Query: 640 YIVPV--------QLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN 691
           Y+V V        + P +  +  +   +   L+P   R        ++ +     +P+  
Sbjct: 577 YVVTVADVVGLHGEYPRLVAVDGLTPPIDMPLKPGQHRTG-----NDITALIVHQIPQPP 631

Query: 692 PVKDMKIEDPEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAEVNHEIQQLKSKM 751
           P++D     PEV + ++++ EL+ +L  HP  +  +   +    R      ++++L++++
Sbjct: 632 PLEDTA---PEVKEQLDRVRELDRQLATHPARQWGNPKLLMKRWR------QVRRLEAEL 682

Query: 752 RDSQI------QKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMF 805
           RD          ++  E  N   VL   G ++AD    L G  A  I   +EL +   + 
Sbjct: 683 RDRTTALAQSSDRYWQEFVNIMAVLTHFGALEADHPTPL-GEIAAAIRGDNELWLAIALA 741

Query: 806 NGTFNDLDHHQVAALASCFIPVDKSS----EQINLRMELAKPLQQLQESARKIAEIQNEC 861
           +G  + L   Q+AA  +  + V+ S        +    +   L  L+   R++ +IQ + 
Sbjct: 742 SGELDHLSPSQLAAACAALV-VENSRPDTWSNYDPSASVLDALGGLRNQRRELFQIQRQE 800

Query: 862 KLEVNVDEYVESTVRPFLMDVIYCWS------------------------KGATFAEVIQ 897
             +VNV  ++E      L+ ++  W+                        +G  + ++  
Sbjct: 801 --DVNVPIWLEFD----LIGIVERWADMGEGQLFTLPASNPEQPEAEDEGEGKDWPDLCG 854

Query: 898 MTDIFEGSIIRSARRLDEFLNQL 920
            T + EG I+R  RR  +FL+Q+
Sbjct: 855 NTSLDEGDIVRILRRTLDFLSQI 877


>gi|282899895|ref|ZP_06307856.1| Type III restriction enzyme, res subunit [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195165|gb|EFA70101.1| Type III restriction enzyme, res subunit [Cylindrospermopsis
           raciborskii CS-505]
          Length = 932

 Score =  332 bits (851), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 273/887 (30%), Positives = 451/887 (50%), Gaps = 98/887 (11%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           ++   + FELD FQ  ++A L    SV+V A T +GKT + EYAI  A    +RV YT+P
Sbjct: 53  DLQSIFPFELDQFQLDAIASLNAGRSVVVCAPTGSGKTLIGEYAIYRALSQGKRVFYTTP 112

Query: 128 LKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEV------ 179
           LKALSNQK R+  ++F    VGL+TGD +++  A  +VMTTEI R MLY G+ +      
Sbjct: 113 LKALSNQKLRDFREKFGFDQVGLLTGDASVNREAPIIVMTTEIFRNMLY-GTPIGQIGVS 171

Query: 180 LKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQ 239
           L  V  V+ DE HYM D++RG VWEESII+ P  +++V LSAT+ N+ Q  +W+  +H  
Sbjct: 172 LTNVEAVVLDECHYMNDQQRGTVWEESIIYCPQEVQLVALSATVDNSDQLTDWLNRVHG- 230

Query: 240 PCHVVYTDFRPTPLQ-HYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRREN 298
           P  ++Y+DFRP PL+ H+  P    GL+ +++E       N  K+    +K+   G  E 
Sbjct: 231 PTDLIYSDFRPVPLEFHFCNP---KGLFPLLNE-------NKTKINSRLIKRGKKGIGER 280

Query: 299 GKASGRMAKGGSGSGGSDIFKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKLDFNTQE 358
           G         G+      I   +  + ER   P I F FSRR C++    +S L     E
Sbjct: 281 GY--------GNRPEPPTIVYTLSQLSERDMLPAIFFIFSRRGCDKAVSEVSDLWLVNNE 332

Query: 359 EKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGL 418
           E     Q+ +  +D     +        + PL K GIA HH+G+LP  K LVE LFQ+GL
Sbjct: 333 ES----QILRVQIDEFLTRNPEAGRSGQIAPLYK-GIAAHHAGILPAWKLLVEELFQQGL 387

Query: 419 VKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGIC 478
           +K +FATET A G+NMPA+T V + + K   + HR + + E++QMSGRAGRRG D +G  
Sbjct: 388 IKVVFATETLAAGINMPARTTVISTLSKRTDNGHRLLKASEFLQMSGRAGRRGMDKQG-H 446

Query: 479 IIMVDEQMEMNTLKDMVLGKPA-PLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQF 537
           ++ +    E       +   PA PLVS F  SY  +LNL+     +  A+ +I+ SF Q+
Sbjct: 447 VVTLQTPFEGAREAAYLATSPADPLVSQFTPSYGMVLNLLQTHTLE-QAKELIERSFGQY 505

Query: 538 --------QYEKALPDIGKKVSKLEEEAASLDASGEAEVAEYHKLKLDIAQLEKKL---M 586
                   +Y++ + +I  +++K+EEE +++D   E E+  Y KLK  I ++E  +   +
Sbjct: 506 MATLYLKPEYDE-IEEIKAELAKIEEELSAID---ENEITLYEKLK-QILKVELHIFRTL 560

Query: 587 SEITRPER------VLYYLGSGRLIKVREGGTDWGWGVVVNVVKK-----PSAGVGTLPS 635
            E  R ER      +L +   G ++ +R+  T     +   +  K     PS+ +  L  
Sbjct: 561 QEQLREERESELYMMLEFAVKGTVLSLRDKNTTATLPMTAILYSKVPETGPSSFIICL-G 619

Query: 636 RGGGYIVPVQLPLISTLSKI-RLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVK 694
           +   +       +I   + I R+ VP  + P      I L +++  S   +G  +   + 
Sbjct: 620 KNNRWYSATNSDVIEVHAHISRVEVPESIIP-----PIELGLKKGYSW--RGDAQTAEIA 672

Query: 695 DMKIED--------PEVVDLVNQIEELEHKLFAHPLNKSQDENQIRCFQRKAE---VNHE 743
           D+ I D        PE+ + +N++  ++ ++  + +++S     I  F++KAE   +   
Sbjct: 673 DL-IPDTTEFLYMTPELANQLNRVVSIQSQMEKNSVHQSGKIGHI--FKQKAEFVGLKSY 729

Query: 744 IQQLKSKMRDSQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTEL 803
           ++ L+ K++ +  + + ++  N  R+L+    +D      L G+ A  I   +EL +   
Sbjct: 730 LEGLEKKVKRNSEEHW-EQFLNLIRILQHFDALDNLAPTHL-GQMASTIRGENELWLGLA 787

Query: 804 MFNGTFNDLDHHQVAALASCF---IPVDKSSEQINLRMELAKPLQQLQESARKIAEIQNE 860
           + +G  ++LD H +AA  +      P   S    NL  E+   L +L+   RK+ +IQ+ 
Sbjct: 788 IDSGELDNLDPHHLAAAVAALVTETPRPDSRVSFNLSNEVGSALSKLRNIRRKLFQIQHR 847

Query: 861 CKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSII 907
             + + +    E      L+ ++  W+ G  + ++  MT + EG ++
Sbjct: 848 YHVALPIWLEFE------LIAIVEQWALGTKWLQLCAMTTLDEGDVV 888


>gi|302518098|ref|ZP_07270440.1| ATP-dependent RNA helicase [Streptomyces sp. SPB78]
 gi|302426993|gb|EFK98808.1| ATP-dependent RNA helicase [Streptomyces sp. SPB78]
          Length = 946

 Score =  332 bits (851), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 276/960 (28%), Positives = 438/960 (45%), Gaps = 124/960 (12%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  S   LE  + VLV+A T +GKT V E+A+ +A R  ++  YT+
Sbjct: 37  GAFREMYEFGLDPFQIESCQALEAGKGVLVAAPTGSGKTIVGEFAVHLALRQGKKCFYTT 96

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + 
Sbjct: 97  PIKALSNQKFGDLSKRYGADKVGLLTGDNSVNADAPVVVMTTEVLRNMLYAGSPALTGLG 156

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    VV
Sbjct: 157 YVVMDEVHYLSDRIRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVV 215

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS-- 302
            ++ RP PL  +V  + G  +Y + +E                     GGR+        
Sbjct: 216 VSEHRPVPLFQHV--LAGRRMYDLFEEG--------------------GGRKRAVNPDLL 253

Query: 303 --GRMAKGGSGSGGSDIF---------------------KIVKMIMERKFQPVIVFSFSR 339
              RM  G +G GG                         +++  +      P I F FSR
Sbjct: 254 RMARMEAGRTGYGGKRRGREADRERERRQRSRTWTPGRPEVIDRLDSEGLLPAITFIFSR 313

Query: 340 RECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
             CE        + L  N + E+  V ++ +     +  ED ++      L  L+RGIA 
Sbjct: 314 AGCEAAVQQCLFAGLRLNDESERLAVREIVEERTASIPPEDLHVLGYFEFLEGLERGIAA 373

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH+G+LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  
Sbjct: 374 HHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITP 433

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           GEY Q++GRAGRRG D  G  +++    M    L  +   +  PL S+FR SY   +NL+
Sbjct: 434 GEYTQLTGRAGRRGIDVEGHAVVLWQRAMSPEHLAGLAGTRTYPLRSSFRPSYNMAVNLV 493

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKL 574
            +  G+  +  +++ SF QFQ ++++  I + V + E   A    S    +    EY +L
Sbjct: 494 QQF-GRHRSRELLETSFAQFQADRSVVGISRDVQRNEAGLAGYKESMTCHLGDFEEYSRL 552

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +  +   E +L  E     R         L K+R G          +++  P+     L 
Sbjct: 553 RRQLKDRENELAREGVNQRRAAAAA---ALEKLRPG----------DIIHVPTGKFAGL- 598

Query: 635 SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR-----FP---QG 686
                    V  P +     +      D    D  + ++L  +    R     FP   + 
Sbjct: 599 -------ALVLDPGVPAGRAVGGRRGRDFDAFDGPRPLVLTAERQVKRLNGVDFPVPVEA 651

Query: 687 LPKLNPVKDMKIEDPEV-VDLVNQIEELEHKLFAHPLNKSQDE-------NQIR------ 732
           L ++   K      P+   DL + +      L      K + E       N++R      
Sbjct: 652 LDRMRVPKSFNARSPQSRRDLASALRTKAGHLVPERHRKGRAEAADDREINRLRTELRAH 711

Query: 733 ----CFQRK-----AEVNHEI----QQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHID 777
               C +R+     AE  H +    +QL+ ++  R + I +  D +     +L +L ++ 
Sbjct: 712 PCHGCSEREDHARWAERYHRLLRDTKQLERRIEGRTNTIARTFDRIVA---LLTELDYLR 768

Query: 778 ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL- 836
            + V +   R A L    D LL +E +  G +  L   ++AA AS  +   +S +     
Sbjct: 769 GEQVTEHGRRLARLYGELD-LLASECLRAGVWEGLGPAELAACASALVYESRSGDDAGAP 827

Query: 837 RMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFA 893
           ++   K    L E  R    +   E    ++  E V     P L      Y W+ G    
Sbjct: 828 KVPSGKVTSALTEMVRLWGRLDAVEEDFGISRTEGV-GQREPDLGFAWAAYEWASGKGLD 886

Query: 894 EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           EV++  ++  G  +R  +++ + L Q+ AAA   G   + K    A + L RG++   S+
Sbjct: 887 EVLREAEMPAGDFVRWTKQIIDVLGQIAAAAPGQGS-TVPKAARRAVDGLLRGVVAYTSV 945


>gi|333028223|ref|ZP_08456287.1| putative ATP-dependent RNA helicase [Streptomyces sp. Tu6071]
 gi|332748075|gb|EGJ78516.1| putative ATP-dependent RNA helicase [Streptomyces sp. Tu6071]
          Length = 935

 Score =  332 bits (850), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 276/960 (28%), Positives = 438/960 (45%), Gaps = 124/960 (12%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  S   LE  + VLV+A T +GKT V E+A+ +A R  ++  YT+
Sbjct: 26  GAFREMYEFGLDPFQIESCQALEAGKGVLVAAPTGSGKTIVGEFAVHLALRQGKKCFYTT 85

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + 
Sbjct: 86  PIKALSNQKFGDLSKRYGADKVGLLTGDNSVNADAPVVVMTTEVLRNMLYAGSPALTGLG 145

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    VV
Sbjct: 146 YVVMDEVHYLSDRIRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVV 204

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS-- 302
            ++ RP PL  +V  + G  +Y + +E                     GGR+        
Sbjct: 205 VSEHRPVPLFQHV--LAGRRMYDLFEEG--------------------GGRKRAVNPDLL 242

Query: 303 --GRMAKGGSGSGGSDIF---------------------KIVKMIMERKFQPVIVFSFSR 339
              RM  G +G GG                         +++  +      P I F FSR
Sbjct: 243 RMARMEAGRTGYGGKRRGREADRERERRQRSRTWTPGRPEVIDRLDSEGLLPAITFIFSR 302

Query: 340 RECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
             CE        + L  N + E+  V ++ +     +  ED ++      L  L+RGIA 
Sbjct: 303 AACEAAVQQCLFAGLRLNDESERLAVREIVEERTASIPPEDLHVLGYFEFLEGLERGIAA 362

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH+G+LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  
Sbjct: 363 HHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITP 422

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           GEY Q++GRAGRRG D  G  +++    M    L  +   +  PL S+FR SY   +NL+
Sbjct: 423 GEYTQLTGRAGRRGIDVEGHAVVLWQRAMSPEHLAGLAGTRTYPLRSSFRPSYNMAVNLV 482

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKL 574
            +  G+  +  +++ SF QFQ ++++  I + V + E   A    S    +    EY +L
Sbjct: 483 QQF-GRHRSRELLETSFAQFQADRSVVGISRDVQRNEAGLAGYKESMTCHLGDFEEYSRL 541

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +  +   E +L  E     R         L K+R G          +++  P+     L 
Sbjct: 542 RRQLKDRENELAREGVNQRRAAAAA---ALEKLRPG----------DIIHVPTGKFAGL- 587

Query: 635 SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR-----FP---QG 686
                    V  P +     +      D    D  + ++L  +    R     FP   + 
Sbjct: 588 -------ALVLDPGVPAGRAVGGRRGRDFDAFDGPRPLVLTAERQVKRLNGVDFPVPVEA 640

Query: 687 LPKLNPVKDMKIEDPEV-VDLVNQIEELEHKLFAHPLNKSQDE-------NQIR------ 732
           L ++   K      P+   DL + +      L      K + E       N++R      
Sbjct: 641 LDRMRVPKSFNARSPQSRRDLASALRTKAGHLVPERHRKGRAEAADDREINRLRTELRAH 700

Query: 733 ----CFQRK-----AEVNHEI----QQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHID 777
               C +R+     AE  H +    +QL+ ++  R + I +  D +     +L +L ++ 
Sbjct: 701 PCHGCSEREDHARWAERYHRLLRDTKQLERRIEGRTNTIARTFDRIVA---LLTELDYLR 757

Query: 778 ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL- 836
            + V +   R A L    D LL +E +  G +  L   ++AA AS  +   +S +     
Sbjct: 758 GEQVTEHGRRLARLYGELD-LLASECLRAGVWEGLGPAELAACASALVYESRSGDDAGAP 816

Query: 837 RMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFA 893
           ++   K    L E  R    +   E    ++  E V     P L      Y W+ G    
Sbjct: 817 KVPSGKVTSALTEMVRLWGRLDAVEEDFGISRTEGV-GQREPDLGFAWAAYEWASGKGLD 875

Query: 894 EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           EV++  ++  G  +R  +++ + L Q+ AAA   G   + K    A + L RG++   S+
Sbjct: 876 EVLREAEMPAGDFVRWTKQIIDVLGQIAAAAPGQGS-TVPKAARRAVDGLLRGVVAYTSV 934


>gi|318059086|ref|ZP_07977809.1| ATP-dependent RNA helicase [Streptomyces sp. SA3_actG]
 gi|318075737|ref|ZP_07983069.1| ATP-dependent RNA helicase [Streptomyces sp. SA3_actF]
          Length = 935

 Score =  332 bits (850), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 276/960 (28%), Positives = 438/960 (45%), Gaps = 124/960 (12%)

Query: 67  GEMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTS 126
           G   + Y F LDPFQ  S   LE  + VLV+A T +GKT V E+A+ +A R  ++  YT+
Sbjct: 26  GAFREMYEFGLDPFQIESCQALEAGKGVLVAAPTGSGKTIVGEFAVHLALRQGKKCFYTT 85

Query: 127 PLKALSNQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVA 184
           P+KALSNQK+ +L + +    VGL+TGD +++ +A  +VMTTE+LR MLY GS  L  + 
Sbjct: 86  PIKALSNQKFGDLSKRYGADKVGLLTGDNSVNADAPVVVMTTEVLRNMLYAGSPALTGLG 145

Query: 185 WVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVV 244
           +V+ DE+HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    VV
Sbjct: 146 YVVMDEVHYLSDRIRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVV 204

Query: 245 YTDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIGGRRENGKAS-- 302
            ++ RP PL  +V  + G  +Y + +E                     GGR+        
Sbjct: 205 VSEHRPVPLFQHV--LAGRRMYDLFEEG--------------------GGRKRAVNPDLL 242

Query: 303 --GRMAKGGSGSGGSDIF---------------------KIVKMIMERKFQPVIVFSFSR 339
              RM  G +G GG                         +++  +      P I F FSR
Sbjct: 243 RMARMEAGRTGYGGKRRGREADRERERRQRSRTWTPGRPEVIDRLDSEGLLPAITFIFSR 302

Query: 340 RECEQHAMS--MSKLDFNTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAV 397
             CE        + L  N + E+  V ++ +     +  ED ++      L  L+RGIA 
Sbjct: 303 AGCEAAVQQCLFAGLRLNDESERLAVREIVEERTASIPPEDLHVLGYFEFLEGLERGIAA 362

Query: 398 HHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGS 457
           HH+G+LP  KE+VE LF  GLVKA+FATET A+G+NMPA++VV   + KW+G+ H  I  
Sbjct: 363 HHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLVKWNGEQHADITP 422

Query: 458 GEYIQMSGRAGRRGKDDRGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLM 517
           GEY Q++GRAGRRG D  G  +++    M    L  +   +  PL S+FR SY   +NL+
Sbjct: 423 GEYTQLTGRAGRRGIDVEGHAVVLWQRAMSPEHLAGLAGTRTYPLRSSFRPSYNMAVNLV 482

Query: 518 SRAEGQFTAEHVIKNSFHQFQYEKALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKL 574
            +  G+  +  +++ SF QFQ ++++  I + V + E   A    S    +    EY +L
Sbjct: 483 QQF-GRHRSRELLETSFAQFQADRSVVGISRDVQRNEAGLAGYKESMTCHLGDFEEYSRL 541

Query: 575 KLDIAQLEKKLMSEITRPERVLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLP 634
           +  +   E +L  E     R         L K+R G          +++  P+     L 
Sbjct: 542 RRQLKDRENELAREGVNQRRAAAAA---ALEKLRPG----------DIIHVPTGKFAGL- 587

Query: 635 SRGGGYIVPVQLPLISTLSKIRLSVPPDLRPLDARQSILLAVQELESR-----FP---QG 686
                    V  P +     +      D    D  + ++L  +    R     FP   + 
Sbjct: 588 -------ALVLDPGVPAGRAVGGRRGRDFDAFDGPRPLVLTAERQVKRLNGVDFPVPVEA 640

Query: 687 LPKLNPVKDMKIEDPEV-VDLVNQIEELEHKLFAHPLNKSQDE-------NQIR------ 732
           L ++   K      P+   DL + +      L      K + E       N++R      
Sbjct: 641 LDRMRVPKSFNARSPQSRRDLASALRTKAGHLVPERHRKGRAEAADDREINRLRTELRAH 700

Query: 733 ----CFQRK-----AEVNHEI----QQLKSKM--RDSQIQKFRDELKNRSRVLKKLGHID 777
               C +R+     AE  H +    +QL+ ++  R + I +  D +     +L +L ++ 
Sbjct: 701 PCHGCSEREDHARWAERYHRLLRDTKQLERRIEGRTNTIARTFDRIVA---LLTELDYLR 757

Query: 778 ADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAALASCFIPVDKSSEQINL- 836
            + V +   R A L    D LL +E +  G +  L   ++AA AS  +   +S +     
Sbjct: 758 GEQVTEHGRRLARLYGELD-LLASECLRAGVWEGLGPAELAACASALVYESRSGDDAGAP 816

Query: 837 RMELAKPLQQLQESARKIAEIQN-ECKLEVNVDEYVESTVRPFL--MDVIYCWSKGATFA 893
           ++   K    L E  R    +   E    ++  E V     P L      Y W+ G    
Sbjct: 817 KVPSGKVTSALTEMVRLWGRLDAVEEDFGISRTEGV-GQREPDLGFAWAAYEWASGKGLD 875

Query: 894 EVIQMTDIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           EV++  ++  G  +R  +++ + L Q+ AAA   G   + K    A + L RG++   S+
Sbjct: 876 EVLREAEMPAGDFVRWTKQIIDVLGQIAAAAPGQGS-TVPKAARRAVDGLLRGVVAYTSV 934


>gi|383649789|ref|ZP_09960195.1| helicase [Streptomyces chartreusis NRRL 12338]
          Length = 933

 Score =  332 bits (850), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 272/934 (29%), Positives = 439/934 (47%), Gaps = 86/934 (9%)

Query: 73  YSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSPLKALS 132
           Y F LDPFQ  +   LE  + VLV+A T +GKT V E+A+ +A +  ++  YT+P+KALS
Sbjct: 32  YDFGLDPFQIEACQALEAGKGVLVAAPTGSGKTIVGEFAVHLALQQGKKCFYTTPIKALS 91

Query: 133 NQKYRELHQEF--KDVGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAWVIFDE 190
           NQKY +L + +    VGL+TGD +++  AS +VMTTE+LR MLY GS+ L  +  V+ DE
Sbjct: 92  NQKYADLCRRYGTDKVGLLTGDNSVNSEASVVVMTTEVLRNMLYAGSQTLLGLGHVVMDE 151

Query: 191 IHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVYTDFRP 250
           +HY+ DR RG VWEE II LP ++ +V LSAT+SNA +F +W+  + +    V+ ++ RP
Sbjct: 152 VHYLSDRFRGAVWEEVIIHLPESVTLVSLSATVSNAEEFGDWLDTV-RGDTEVIVSEHRP 210

Query: 251 TPLQHYVFPVGGSGLYLVVDEKEQFRE---DNFVKLQDTFLKQKIGGRRENGKASGRMAK 307
            PL  +V  + G  +Y + +E E  ++    +  ++      +     R  G+      +
Sbjct: 211 VPLFQHV--LAGRRMYDLFEEGEGHKKAVNPDLTRMARMEATRPSYQDRRRGRLREADRE 268

Query: 308 GGSGSGGSDIFKIVKMIMER----KFQPVIVFSFSRRECEQHAMS--MSKLDFNTQEEKD 361
                           ++ER       P I F FSR  CE        + L  N +E ++
Sbjct: 269 RERRQRSRVWTPSRPEVIERLDAEGLLPAITFIFSRAACEAAVQQCLYAGLRLNDEEARE 328

Query: 362 TVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLFQEGLVKA 421
            V  + +     +  ED ++      L  L+RGIA HH+G+LP  KE+VE LF  GLVKA
Sbjct: 329 QVRALVEERTASIPAEDLHVLGYYEWLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKA 388

Query: 422 LFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDDRGICIIM 481
           +FATET A+G+NMPA++VV   + KW+G+ H  I  GE+ Q++GRAGRRG D  G  +++
Sbjct: 389 VFATETLALGINMPARSVVLEKLVKWNGEQHADITPGEFTQLTGRAGRRGIDVEGHAVVL 448

Query: 482 VDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSFHQFQYEK 541
               M    L  +   +  PL S+F+ SY   +NL+ +  G+  +  +++ SF QFQ +K
Sbjct: 449 WQRGMNPEHLAGLAGTRTYPLRSSFKPSYNMAVNLVEQF-GRHRSRELLETSFAQFQADK 507

Query: 542 ALPDIGKKVSKLEEEAASLDASGEAEVA---EYHKLKLDIAQLEKKLMSEITRPER---- 594
           ++  I ++V + EE      AS    +    EY +L+ ++   E +L  +     R    
Sbjct: 508 SVVGISRQVQRNEEGLEGYKASMTCHLGDFEEYARLRRELKDRENELARQGAAQRRAEAA 567

Query: 595 -VLYYLGSGRLIKVREGGTDWGWGVVVNVVKKPSAGVGTLPSRGGGYIVPVQLPLIST-- 651
             L  L  G +I V  G         + +V  P    G      G        PL+ T  
Sbjct: 568 VALEKLKPGDVIHVPTGKY-----AGLALVLDPGLPAGRSNGHRGFEHHDGPRPLVLTAE 622

Query: 652 -----LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLN----------PVKDM 696
                L+ I   VP  + PL+ R  I    +    R PQ    L           P    
Sbjct: 623 RQVKRLAAIDFPVP--VEPLE-RMRI---PKSFNPRSPQSRRDLASALRTKAGHIPADRH 676

Query: 697 KIEDPEVVDLVNQIEELEHKLFAHPLNKSQD-ENQIRCFQRKAEVNHEIQQLKSKM--RD 753
           +    +  D   +I  L   L AHP +   D E+  R  +R   +  +  QL+ ++  R 
Sbjct: 677 RKRRSQAAD-DREIARLRTALRAHPCHGCSDREDHARWAERYHRLLRDTSQLERRIEGRT 735

Query: 754 SQIQKFRDELKNRSRVLKKLGHIDADGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLD 813
           + I +  D +     +L ++ ++  D V +   R A L    D LL +E +  G +  L 
Sbjct: 736 NTIARTFDRIVA---LLTEMDYLRGDEVTEHGKRLARLYGELD-LLASECLREGVWEGLG 791

Query: 814 HHQVAALASCFI--------------PVDKSSEQINLRMELAKPLQQLQESARKIAEIQN 859
             ++A   S  +              P  ++   +   + +   L  L+E  R I++ + 
Sbjct: 792 PAELAGCVSALVYEARVGDDALAPKLPSGRAKAALGEMVRIWGRLDALEEEFR-ISQTEG 850

Query: 860 ECKLEVNVDEYVESTVRPFLMDVIYCWSKGATFAEVIQMTDIFEGSIIRSARRLDEFLNQ 919
             + E ++                Y W+ G    EV++  ++  G  +R  +++ + L Q
Sbjct: 851 VGQREPDLG----------FAWAAYMWASGKGLDEVLREAEMPAGDFVRWCKQVIDVLGQ 900

Query: 920 LRAAAQAVGEVNLEKKFAAASESLRRGIMFSNSL 953
           + AAA     V   K    A + L RG++  +S+
Sbjct: 901 IAAAAPQGSSVV--KNARKAVDLLLRGVVAYSSV 932


>gi|407279624|ref|ZP_11108094.1| dead/deah box helicase [Rhodococcus sp. P14]
          Length = 909

 Score =  331 bits (849), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 265/915 (28%), Positives = 434/915 (47%), Gaps = 64/915 (6%)

Query: 68  EMAKTYSFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMAFRDKQRVIYTSP 127
           E      F LDPFQ  +   LE    VLV A T AGKT V E+A+ +A R   +  YT+P
Sbjct: 20  EFTAGLPFPLDPFQVQACRALEGGHGVLVCAPTGAGKTVVGEFAVHLALRAGSKCFYTTP 79

Query: 128 LKALSNQKYRELHQEFKD--VGLMTGDVTLSPNASCLVMTTEILRGMLYRGSEVLKEVAW 185
           +KALSNQKY +L   +    VGL+TGD +++P+A  +VMTTE+LR MLY  S  L  +  
Sbjct: 80  IKALSNQKYADLVARYGKAAVGLLTGDQSVNPDAPVVVMTTEVLRNMLYASSTTLIGLTH 139

Query: 186 VIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATQFAEWICHLHKQPCHVVY 245
           V+ DE+H++ DR RG VWEE I+ LP  +++V LSAT+SNA +F +W+  +      VV 
Sbjct: 140 VVMDEVHFLADRFRGAVWEEVILHLPEDVRLVSLSATVSNAEEFGDWMETVRGDTA-VVV 198

Query: 246 TDFRPTPLQHYVFPVGGSGLYLVVDEKEQFREDNFVKLQDTFLKQKIG---GRRENGKAS 302
            + RP PL  +V    G  ++ + +        +    +   + +++     RR    ++
Sbjct: 199 DEVRPIPLHQHVMV--GPRIFDLFESAAHPDAADGTGRRGVVVNRELVEQVRRRAALDSA 256

Query: 303 GRMAKGGSGSGGSDIFK------IVKMIMERKFQPVIVFSFSRRECEQHAMSM--SKLDF 354
           GR      G  G   F+      +V  +      P I F FSR  C+        + L  
Sbjct: 257 GRW----GGPRGRIGFRPLPRPEVVARLDREGLLPAITFVFSRAGCDAAVGQCLRAGLHL 312

Query: 355 NTQEEKDTVEQVFQNAVDCLNEEDRNLPAIELMLPLLKRGIAVHHSGLLPVIKELVELLF 414
            ++ E   +  V       L   D  +         L+RGIA HH+G+LP  +  VE LF
Sbjct: 313 TSEAEIAQIRAVVDEHTGDLPRADLEVLGFREWRAALERGIAAHHAGMLPAFRHTVEDLF 372

Query: 415 QEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYIGSGEYIQMSGRAGRRGKDD 474
             GLV+A+FATET A+G+NMPA+TVV   + K++G++H  +  GEY Q++GRAGRRG D 
Sbjct: 373 VRGLVRAVFATETLALGINMPARTVVLEKLVKYNGETHAELTPGEYTQLTGRAGRRGIDV 432

Query: 475 RGICIIMVDEQMEMNTLKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKNSF 534
            G  +++    +E   +  +   +  PL S+FR SY   +NL+  A G   +  +++ SF
Sbjct: 433 EGHAVVLWQPGLEPADVAGLASTRTFPLRSSFRPSYNMAVNLID-AVGAEHSRALLERSF 491

Query: 535 HQFQYEKALPDIGKKVSKLEEEAASL-DASG--EAEVAEYHKLKLDIAQLEKKLMSEITR 591
            QFQ +K++  + + + + E+  A L D  G  + E+ +Y +L+ ++ QLE+    +  +
Sbjct: 492 AQFQADKSVVGLTRGIERNEKTLAKLRDQLGGEDGEILDYLQLREELTQLERARERQARQ 551

Query: 592 PER-----VLYYLGSGRLIKVREGGTDWGWGVVVNV---VKKPSAGVGTLPSRGGGYIVP 643
             R      L  L  G ++ +  GG   G  VV+     V  P   V T  +   G +  
Sbjct: 552 DRRQAAVASLLALRRGDIVAI-PGGRRTGLAVVLETDTDVTDPRPLVVTADA-WSGRVSA 609

Query: 644 VQLPLIST-LSKIRLSVPPDLRPLDARQSILLAVQELESRFPQGLPKLNPVKDMKIEDPE 702
              P  +T L K+RL   P        ++       L S    G+      K  K  D  
Sbjct: 610 ADFPAPATALGKLRL---PRHADARTARARRDLASALRS---TGISAPRRPKRAKHGDS- 662

Query: 703 VVDLVNQIEELEHKLFAHPLNKSQDENQI-RCFQRKAEVNHEIQQLKSKMRDSQIQKFRD 761
                 +I+ L  +L  HP ++  D +++ R  +R   +  E+ Q++ +   +       
Sbjct: 663 -----REIDTLRRRLRRHPAHQHPDLDRLARLGERYNRLGREVAQMR-RQSAATTNSLAR 716

Query: 762 ELKNRSRVLKKLGHIDA--DGVVQLKGRAACLIDTGDELLVTELMFNGTFNDLDHHQVAA 819
             +    +L + G++ A  D      G     I +  +LLV E + +G +  L   ++AA
Sbjct: 717 TFERIVALLTERGYLTAGDDPSTTEAGERLARIYSESDLLVAECLRHGVWAGLSPAELAA 776

Query: 820 LASCFIPVDKSSEQINLRMELAKPLQQ-LQESARKIAEIQNECKLEVNVDEYVESTVRPF 878
           + S  +  +  +E+        +PL++ L ++ R   +++ +   EV           P 
Sbjct: 777 VVSAVV-YEARAEEGATEYGPTRPLRRALADTVRLCGQLRAD---EVRFKLPPTREPDPG 832

Query: 879 LMDVIYCWSKGATFAEVIQMT-----DIFEGSIIRSARRLDEFLNQLRAAAQAVGEVNLE 933
            +D IY W    +  E +        D+  G  +R  R++ + L+Q+R  A    +  L 
Sbjct: 833 FVDAIYTWVSTQSLTEALLAAGTAGRDLSAGDFVRWCRQVIDLLDQIRTGAV---DPQLA 889

Query: 934 KKFAAASESLRRGIM 948
           K  A A  ++RRG++
Sbjct: 890 KTAARAIGAIRRGVV 904


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.134    0.384 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,291,420,955
Number of Sequences: 23463169
Number of extensions: 614574336
Number of successful extensions: 1889174
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5100
Number of HSP's successfully gapped in prelim test: 2941
Number of HSP's that attempted gapping in prelim test: 1858384
Number of HSP's gapped (non-prelim): 17832
length of query: 955
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 803
effective length of database: 8,792,793,679
effective search space: 7060613324237
effective search space used: 7060613324237
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 82 (36.2 bits)