BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002185
         (955 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q8RWW0|ALE2_ARATH Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis
           thaliana GN=ALE2 PE=1 SV=1
          Length = 744

 Score =  167 bits (423), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 23/209 (11%)

Query: 704 PPNADCSTTICTEPYTNTPPGSPCGCVWPMQVGLRLSVALYTFFPLVSELAGEIAAGVFM 763
           P + DC  T C EP T+TP GSPCGCV+PM+V L LSVA ++ FP+ +EL  E+AAG ++
Sbjct: 93  PSSHDCQQT-CVEPLTSTPFGSPCGCVFPMKVQLLLSVAPFSIFPVTNELEIEVAAGTYL 151

Query: 764 KQSQVRIIGANA-AEQPDKTVVLTDLVPLGEKFDNTTAFLTYQRFWHKQVVIKSSYFGDY 822
           +QSQV+I+GA+A +E   KTVV  +LVPLGEKFDNTTA L YQRF HK+V +  + FGDY
Sbjct: 152 EQSQVKIMGASADSENQGKTVVDINLVPLGEKFDNTTATLIYQRFRHKKVPLNETVFGDY 211

Query: 823 EVLYVRYPGLPPSPPSASSSIGIIDDGPYSGNNGRATKPEGVDVPKRRQKY-----GLSG 877
           EV ++ YPG+P S P          +G  +G+      P G+ +P     +     G+  
Sbjct: 212 EVTHISYPGIPSSSP----------NGDVTGD-----APGGLPIPINATTFANKSQGIGF 256

Query: 878 GMIAIVVLSAFVAVVLCSAAAWVLLFKYK 906
             IAI+ LS FV ++L    A  ++ K+K
Sbjct: 257 RTIAIIALSGFV-LILVLVGAISIIVKWK 284


>sp|Q9HCI5|MAGE1_HUMAN Melanoma-associated antigen E1 OS=Homo sapiens GN=MAGEE1 PE=1 SV=2
          Length = 957

 Score = 43.9 bits (102), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 152/351 (43%), Gaps = 48/351 (13%)

Query: 96  APPPSLIPTNPVASPPSITAPPPVNMAPPPSLIPTTPVASPPPITAPPLVNVLPAPSLIP 155
            P  S++PT+  A  PS   PP ++ A   S  PT        I+  P  +VLP PS   
Sbjct: 63  GPSTSVLPTS--AEGPSTFVPPTISEASSASGQPT--------ISEGPGTSVLPTPSEGL 112

Query: 156 TT----PLASPLSSKAFPPASPPSNAARPPAS--HPSNTARPPASH-PSRTAPPPASHPS 208
           +T     ++  L +     AS   N +RPP S   PS +  P AS  PS + PP     +
Sbjct: 113 STSGPPTISKGLCTSVTLAASEGRNTSRPPTSSEEPSTSVPPTASEVPSTSLPPTPGEGT 172

Query: 209 NTALP--------SKTAPSPASHPSNTALP-PASLPSKTAPPPASHLSNTAPPPASHPYK 259
           +T++P        +   P+P   PS + LP P   P  + P  A+   +T+         
Sbjct: 173 STSVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSVPLAATEGLSTS--------- 223

Query: 260 TSPLPASHPSKTAPPPASHPSNTAPPPASH--PSKTAPP-PASHPSNTAPPPASHPSNTA 316
               P   PS + PP A+   +T  PP     PS + P  P   PS +  P AS   + +
Sbjct: 224 VQATPDEGPSTSVPPTATEGLSTPVPPTRDEGPSTSVPATPGEGPSTSVLPAASDGQSIS 283

Query: 317 --PPPASHPSNTAPPPASHP-SNTAPPPASHSSKTAPPPA-SHPSNTALPP-ASHPSNPA 371
             P      S + PP A+   S +  P A   S T+ PP      +T++PP A+   + +
Sbjct: 284 LVPTRGKGSSTSVPPTATEGLSTSVQPTAGEGSSTSVPPTPGGGLSTSVPPTATEELSTS 343

Query: 372 IP--PASHPSNTAIP-PASHPSNTAPPHASHPSNTAL--TPASHPSNIAPP 417
           +P  P   PS + +P P    S + PP AS  S+T++  TP    S +  P
Sbjct: 344 VPPTPGEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLVQP 394


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.130    0.407 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,510,401
Number of Sequences: 539616
Number of extensions: 25883377
Number of successful extensions: 471732
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1717
Number of HSP's successfully gapped in prelim test: 5727
Number of HSP's that attempted gapping in prelim test: 123950
Number of HSP's gapped (non-prelim): 104091
length of query: 955
length of database: 191,569,459
effective HSP length: 127
effective length of query: 828
effective length of database: 123,038,227
effective search space: 101875651956
effective search space used: 101875651956
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)