Query 002186
Match_columns 955
No_of_seqs 862 out of 6021
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:03:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002186hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.8E-83 9.5E-88 791.6 42.1 592 22-630 8-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 6.8E-65 2.3E-69 627.5 30.3 548 62-615 30-715 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 4.9E-58 1.7E-62 561.1 46.6 545 75-622 25-627 (680)
4 3t6q_A CD180 antigen; protein- 100.0 9.7E-57 3.3E-61 542.2 36.0 501 101-605 33-571 (606)
5 1ziw_A TOLL-like receptor 3; i 100.0 3E-55 1E-59 536.4 44.3 528 76-606 50-635 (680)
6 4eco_A Uncharacterized protein 100.0 1.6E-57 5.4E-62 548.9 21.1 426 23-471 27-546 (636)
7 4ecn_A Leucine-rich repeat pro 100.0 1.5E-56 5.1E-61 548.1 29.2 507 23-593 266-863 (876)
8 3j0a_A TOLL-like receptor 5; m 100.0 8E-55 2.7E-59 543.1 40.2 519 64-601 15-567 (844)
9 3t6q_A CD180 antigen; protein- 100.0 3.5E-54 1.2E-58 519.8 42.5 500 116-621 26-564 (606)
10 3vq2_A TLR4, TOLL-like recepto 100.0 1.1E-54 3.7E-59 524.3 35.9 493 101-605 32-569 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 6.1E-54 2.1E-58 517.7 35.7 503 105-622 15-563 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 2.4E-53 8.3E-58 529.8 39.3 509 100-622 23-565 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 5.2E-50 1.8E-54 479.9 35.4 510 101-621 28-560 (570)
14 2z81_A CD282 antigen, TOLL-lik 100.0 2.6E-50 9E-55 480.1 27.9 490 62-603 3-519 (549)
15 4eco_A Uncharacterized protein 100.0 2.7E-51 9.3E-56 494.4 15.3 505 24-595 25-601 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 1.3E-48 4.3E-53 467.9 33.7 489 75-575 28-536 (570)
17 4gt4_A Tyrosine-protein kinase 100.0 1.1E-49 3.9E-54 431.8 19.3 245 695-951 30-305 (308)
18 4asz_A BDNF/NT-3 growth factor 100.0 8.8E-50 3E-54 430.8 17.8 245 695-951 17-288 (299)
19 4aoj_A High affinity nerve gro 100.0 8.4E-50 2.9E-54 437.0 16.5 245 695-951 45-318 (329)
20 3omv_A RAF proto-oncogene seri 100.0 2.1E-49 7.3E-54 427.4 18.6 247 695-951 40-299 (307)
21 3hmm_A TGF-beta receptor type- 100.0 2.1E-49 7.3E-54 431.1 17.1 256 695-952 7-297 (303)
22 4ecn_A Leucine-rich repeat pro 100.0 2.3E-47 7.8E-52 467.0 33.1 444 101-598 323-844 (876)
23 2z7x_B TOLL-like receptor 1, v 100.0 1.6E-47 5.6E-52 452.6 24.6 457 104-602 3-489 (520)
24 4g8a_A TOLL-like receptor 4; l 100.0 6.1E-46 2.1E-50 450.5 35.7 556 40-621 8-584 (635)
25 4fih_A Serine/threonine-protei 100.0 6.6E-48 2.3E-52 420.7 16.0 242 695-946 78-324 (346)
26 2z7x_B TOLL-like receptor 1, v 100.0 1.8E-47 6E-52 452.3 19.9 453 79-574 4-485 (520)
27 3fpq_A Serine/threonine-protei 100.0 1.9E-47 6.5E-52 409.3 16.7 243 695-946 30-283 (290)
28 4g3f_A NF-kappa-beta-inducing 100.0 2.3E-47 8E-52 415.3 16.3 241 695-949 62-313 (336)
29 4b9d_A Serine/threonine-protei 100.0 3.5E-47 1.2E-51 415.7 15.9 242 690-945 25-276 (350)
30 2z81_A CD282 antigen, TOLL-lik 100.0 7E-46 2.4E-50 441.9 28.4 486 103-621 7-514 (549)
31 4ase_A Vascular endothelial gr 100.0 4.8E-47 1.6E-51 418.4 14.6 245 695-950 68-345 (353)
32 4fie_A Serine/threonine-protei 100.0 1E-46 3.4E-51 421.6 16.5 245 690-946 152-401 (423)
33 3hyh_A Carbon catabolite-derep 100.0 9.5E-46 3.2E-50 392.4 18.5 242 689-946 13-263 (275)
34 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.1E-46 1.1E-50 401.4 14.3 239 691-944 34-283 (311)
35 4g8a_A TOLL-like receptor 4; l 100.0 9.3E-44 3.2E-48 431.4 32.3 518 76-605 53-591 (635)
36 3ubd_A Ribosomal protein S6 ki 100.0 8.2E-46 2.8E-50 398.4 11.6 241 690-945 25-281 (304)
37 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.4E-44 2.2E-48 425.5 26.0 462 101-604 31-520 (562)
38 4g31_A Eukaryotic translation 100.0 1.9E-44 6.6E-49 389.8 18.0 240 690-945 6-279 (299)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.2E-43 4E-48 423.2 22.3 453 78-574 34-514 (562)
40 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-42 4.7E-47 381.2 18.6 293 22-352 2-302 (313)
41 1jl5_A Outer protein YOPM; leu 100.0 4.5E-41 1.5E-45 387.6 28.5 407 100-598 10-433 (454)
42 1jl5_A Outer protein YOPM; leu 100.0 6.4E-41 2.2E-45 386.3 28.6 410 75-579 11-438 (454)
43 3v47_A TOLL-like receptor 5B a 100.0 6.4E-41 2.2E-45 389.2 27.8 364 101-479 30-412 (455)
44 4b99_A Mitogen-activated prote 100.0 1.8E-41 6.2E-46 380.6 20.1 251 690-946 55-345 (398)
45 4f9c_A Cell division cycle 7-r 100.0 2.5E-41 8.6E-46 375.6 17.4 196 687-889 19-251 (361)
46 3v47_A TOLL-like receptor 5B a 100.0 5.4E-40 1.8E-44 381.5 28.4 366 125-505 30-414 (455)
47 3bz5_A Internalin-J, INLJ; leu 100.0 1.6E-39 5.4E-44 375.0 29.9 360 117-600 34-393 (457)
48 3v5w_A G-protein coupled recep 100.0 8.2E-41 2.8E-45 389.8 18.7 244 690-945 190-449 (689)
49 3uto_A Twitchin; kinase, muscl 100.0 6E-41 2E-45 395.4 15.3 250 686-946 154-411 (573)
50 3bz5_A Internalin-J, INLJ; leu 100.0 1.5E-38 5.2E-43 366.8 32.4 309 100-471 41-349 (457)
51 2qkw_B Protein kinase; three-h 100.0 5.1E-39 1.7E-43 354.9 23.3 257 687-950 37-313 (321)
52 3uim_A Brassinosteroid insensi 100.0 3.1E-39 1.1E-43 357.5 18.8 259 689-951 30-310 (326)
53 3soc_A Activin receptor type-2 100.0 3E-39 1E-43 356.6 17.4 257 695-952 28-318 (322)
54 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-38 4.2E-43 350.0 19.9 249 691-951 12-281 (310)
55 3fxz_A Serine/threonine-protei 100.0 1E-38 3.4E-43 348.1 18.1 247 688-946 19-270 (297)
56 3sxs_A Cytoplasmic tyrosine-pr 100.0 8.8E-39 3E-43 343.3 17.1 249 695-955 12-267 (268)
57 2psq_A Fibroblast growth facto 100.0 1.7E-38 5.7E-43 357.2 18.6 247 690-950 82-362 (370)
58 4hcu_A Tyrosine-protein kinase 100.0 1E-38 3.6E-43 343.0 15.8 247 695-953 14-267 (269)
59 3q4u_A Activin receptor type-1 100.0 1.9E-38 6.5E-43 346.9 18.0 252 689-950 8-300 (301)
60 3p86_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 349.6 15.4 244 695-951 41-297 (309)
61 1tki_A Titin; serine kinase, m 100.0 1E-38 3.5E-43 351.7 14.4 247 689-946 5-258 (321)
62 3zgw_A Maternal embryonic leuc 100.0 1.9E-38 6.4E-43 352.1 16.5 247 685-946 6-261 (347)
63 3fe3_A MAP/microtubule affinit 100.0 2.8E-38 9.7E-43 348.7 17.7 242 690-946 16-265 (328)
64 2yab_A Death-associated protei 100.0 4.4E-38 1.5E-42 351.4 18.1 250 685-945 8-272 (361)
65 2qol_A Ephrin receptor; recept 100.0 2E-38 6.9E-43 356.7 15.4 247 690-950 46-307 (373)
66 1qcf_A Haematopoetic cell kina 100.0 2.5E-38 8.5E-43 366.0 16.2 245 695-952 192-444 (454)
67 2c30_A Serine/threonine-protei 100.0 7.1E-38 2.4E-42 345.3 18.4 242 695-946 49-295 (321)
68 3kul_A Ephrin type-A receptor 100.0 2.6E-38 8.8E-43 349.4 14.9 244 695-950 53-311 (325)
69 3cbl_A C-FES, proto-oncogene t 100.0 1.8E-38 6E-43 358.3 13.0 246 695-952 118-374 (377)
70 3gen_A Tyrosine-protein kinase 100.0 8.5E-38 2.9E-42 338.5 17.5 248 690-951 25-279 (283)
71 2y0a_A Death-associated protei 100.0 1.2E-37 4.1E-42 344.3 18.5 251 685-946 7-272 (326)
72 3soa_A Calcium/calmodulin-depe 100.0 2.6E-37 9E-42 354.2 21.6 251 685-946 7-268 (444)
73 1opk_A P150, C-ABL, proto-onco 100.0 5.1E-38 1.7E-42 366.8 15.5 247 695-953 224-479 (495)
74 3ugc_A Tyrosine-protein kinase 100.0 3.6E-38 1.2E-42 343.7 13.0 255 690-952 11-291 (295)
75 3niz_A Rhodanese family protei 100.0 1.8E-37 6E-42 340.6 18.5 261 685-951 17-308 (311)
76 2x4f_A Myosin light chain kina 100.0 1.2E-37 4.2E-42 350.1 17.6 246 691-945 89-342 (373)
77 1k9a_A Carboxyl-terminal SRC k 100.0 9.1E-38 3.1E-42 360.6 16.8 243 695-952 197-445 (450)
78 4eqm_A Protein kinase; transfe 100.0 1.4E-37 4.6E-42 338.7 16.9 253 690-952 12-275 (294)
79 1o6l_A RAC-beta serine/threoni 100.0 2.8E-37 9.4E-42 341.8 19.4 242 690-946 6-261 (337)
80 2bdw_A Hypothetical protein K1 100.0 2E-37 6.7E-42 347.2 18.2 250 686-946 26-285 (362)
81 3l9p_A Anaplastic lymphoma kin 100.0 7.7E-38 2.6E-42 351.5 14.5 248 690-951 72-344 (367)
82 3mdy_A Bone morphogenetic prot 100.0 3.4E-37 1.2E-41 342.8 19.6 261 686-953 34-332 (337)
83 3vhe_A Vascular endothelial gr 100.0 7.3E-38 2.5E-42 351.5 14.3 250 689-951 22-354 (359)
84 2nru_A Interleukin-1 receptor- 100.0 1.1E-36 3.8E-41 334.0 23.1 248 697-952 37-306 (307)
85 3dtc_A Mitogen-activated prote 100.0 1.4E-37 4.6E-42 334.6 15.4 247 695-950 11-271 (271)
86 3c0i_A Peripheral plasma membr 100.0 1.6E-37 5.4E-42 346.9 16.5 245 689-945 24-286 (351)
87 4euu_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 336.9 21.9 253 695-950 13-307 (319)
88 3uc3_A Serine/threonine-protei 100.0 2.7E-37 9.3E-42 346.1 18.1 248 690-946 21-275 (361)
89 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.5E-37 1.9E-41 338.9 19.8 237 695-945 13-258 (336)
90 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-37 4.1E-42 359.8 15.1 244 695-951 188-439 (452)
91 2w4o_A Calcium/calmodulin-depe 100.0 2.2E-37 7.4E-42 345.4 16.6 247 689-946 53-306 (349)
92 3lb7_A RAF proto-oncogene seri 100.0 3.5E-37 1.2E-41 337.5 17.7 247 695-951 40-299 (307)
93 1o6v_A Internalin A; bacterial 100.0 6.9E-36 2.4E-40 347.4 29.7 341 100-471 45-385 (466)
94 3gxj_A TGF-beta receptor type- 100.0 1.8E-38 6.1E-43 347.5 7.2 256 689-953 3-298 (303)
95 3qd2_B Eukaryotic translation 100.0 4.7E-37 1.6E-41 340.8 18.8 243 688-946 5-326 (332)
96 3t9t_A Tyrosine-protein kinase 100.0 2.6E-37 9E-42 331.6 15.9 246 695-952 12-264 (267)
97 3poz_A Epidermal growth factor 100.0 1.6E-37 5.5E-42 343.6 14.4 244 695-951 19-277 (327)
98 1kob_A Twitchin; kinase, intra 100.0 2.8E-37 9.7E-42 347.9 16.6 251 685-946 47-305 (387)
99 3tt0_A Basic fibroblast growth 100.0 4.7E-37 1.6E-41 347.4 18.3 247 690-950 70-350 (382)
100 3tki_A Serine/threonine-protei 100.0 2.1E-37 7.2E-42 341.7 15.1 246 689-946 7-262 (323)
101 3g2f_A Bone morphogenetic prot 100.0 2.9E-37 9.9E-42 343.3 16.3 258 690-950 14-316 (336)
102 1luf_A Muscle-specific tyrosin 100.0 5.8E-37 2E-41 341.8 18.6 250 690-953 48-336 (343)
103 1o6v_A Internalin A; bacterial 100.0 1.5E-35 5.3E-40 344.4 30.6 358 109-500 32-389 (466)
104 3kn6_A Ribosomal protein S6 ki 100.0 2.4E-37 8.1E-42 341.6 14.4 246 696-946 16-271 (325)
105 4dc2_A Protein kinase C IOTA t 100.0 8.3E-37 2.8E-41 344.0 19.0 247 690-945 53-318 (396)
106 4f0f_A Serine/threonine-protei 100.0 1.4E-36 4.7E-41 329.7 20.1 246 691-950 21-287 (287)
107 2ivs_A Proto-oncogene tyrosine 100.0 4.1E-37 1.4E-41 338.5 16.1 249 690-952 24-311 (314)
108 2pmi_A Negative RE, cyclin-dep 100.0 3.3E-36 1.1E-40 331.6 23.1 256 690-952 6-302 (317)
109 2izr_A Casein kinase I isoform 100.0 3.1E-37 1.1E-41 341.9 14.8 251 690-950 10-279 (330)
110 4fr4_A YANK1, serine/threonine 100.0 1.9E-36 6.4E-41 340.0 21.2 244 690-945 16-271 (384)
111 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-37 1.1E-41 343.5 14.4 241 690-945 24-280 (353)
112 2eva_A TAK1 kinase - TAB1 chim 100.0 8.9E-37 3.1E-41 334.4 17.6 245 695-951 12-262 (307)
113 3kmu_A ILK, integrin-linked ki 100.0 6.3E-37 2.1E-41 329.3 15.9 247 691-952 12-270 (271)
114 1ob3_A PFPK5, cell division co 100.0 3.9E-37 1.3E-41 334.2 14.2 247 695-946 6-281 (288)
115 2zv2_A Calcium/calmodulin-depe 100.0 7.6E-37 2.6E-41 333.7 16.3 243 690-945 14-292 (298)
116 1fot_A TPK1 delta, CAMP-depend 100.0 1.1E-36 3.7E-41 334.6 17.5 240 690-945 7-258 (318)
117 1xjd_A Protein kinase C, theta 100.0 4.3E-37 1.5E-41 341.1 14.2 241 689-944 17-268 (345)
118 3p1a_A MYT1 kinase, membrane-a 100.0 6.9E-37 2.3E-41 336.0 15.6 240 689-946 57-305 (311)
119 3ttj_A Mitogen-activated prote 100.0 2.2E-36 7.6E-41 349.4 20.5 252 689-946 62-356 (464)
120 3kex_A Receptor tyrosine-prote 100.0 7.9E-37 2.7E-41 337.8 16.0 244 695-951 17-275 (325)
121 3a8x_A Protein kinase C IOTA t 100.0 1.4E-36 4.8E-41 337.7 18.0 247 690-945 10-275 (345)
122 1rjb_A FL cytokine receptor; k 100.0 6.2E-37 2.1E-41 341.7 15.2 247 695-952 49-334 (344)
123 3o0g_A Cell division protein k 100.0 2.2E-36 7.6E-41 329.0 19.1 248 695-946 6-283 (292)
124 3hko_A Calcium/calmodulin-depe 100.0 1.7E-36 5.7E-41 338.5 18.6 252 684-946 21-331 (345)
125 3v8s_A RHO-associated protein 100.0 3.5E-37 1.2E-41 349.1 13.2 246 690-946 70-330 (410)
126 3kfa_A Tyrosine-protein kinase 100.0 1.3E-36 4.4E-41 330.1 17.0 247 690-950 14-269 (288)
127 3qup_A Tyrosine-protein kinase 100.0 7.3E-37 2.5E-41 338.0 15.2 248 690-951 24-297 (323)
128 3c1x_A Hepatocyte growth facto 100.0 1.3E-36 4.5E-41 341.5 17.4 245 695-950 93-353 (373)
129 1t46_A HOMO sapiens V-KIT hard 100.0 7.5E-37 2.6E-41 336.3 15.1 248 690-950 24-305 (313)
130 1mp8_A Focal adhesion kinase 1 100.0 1.5E-36 5.2E-41 328.3 17.3 247 690-951 16-275 (281)
131 4fvq_A Tyrosine-protein kinase 100.0 5.8E-37 2E-41 333.1 13.8 243 695-952 12-275 (289)
132 1nxk_A MAP kinase-activated pr 100.0 9.7E-37 3.3E-41 346.2 16.2 241 697-946 68-322 (400)
133 1csn_A Casein kinase-1; phosph 100.0 7.7E-37 2.6E-41 333.7 14.8 251 690-950 11-281 (298)
134 1qpc_A LCK kinase; alpha beta 100.0 1.2E-36 4.1E-41 328.8 16.1 246 690-950 14-267 (279)
135 3dls_A PAS domain-containing s 100.0 1.6E-36 5.5E-41 336.3 17.5 240 686-946 21-275 (335)
136 3fdn_A Serine/threonine-protei 100.0 2.2E-36 7.4E-41 326.7 18.0 242 690-946 10-258 (279)
137 2a2a_A Death-associated protei 100.0 2.2E-36 7.6E-41 333.7 18.3 250 685-946 8-273 (321)
138 3is5_A Calcium-dependent prote 100.0 4.2E-36 1.4E-40 325.5 20.1 247 686-945 19-278 (285)
139 4e5w_A Tyrosine-protein kinase 100.0 1E-36 3.6E-41 333.3 15.2 250 695-950 25-300 (302)
140 2h8h_A Proto-oncogene tyrosine 100.0 5.7E-37 1.9E-41 361.2 13.9 244 695-951 271-522 (535)
141 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.3E-36 7.8E-41 336.5 18.0 240 690-945 42-293 (350)
142 2id5_A Lingo-1, leucine rich r 100.0 4E-35 1.4E-39 342.5 29.3 304 101-452 32-335 (477)
143 1b6c_B TGF-B superfamily recep 100.0 2.6E-36 8.9E-41 336.5 18.4 260 685-953 38-337 (342)
144 2wqm_A Serine/threonine-protei 100.0 3.7E-36 1.3E-40 330.2 19.3 253 689-952 32-297 (310)
145 2y94_A 5'-AMP-activated protei 100.0 3.1E-36 1.1E-40 347.4 19.3 238 695-945 20-266 (476)
146 2qr7_A Ribosomal protein S6 ki 100.0 1.2E-36 4.3E-41 337.7 14.9 249 686-945 19-277 (342)
147 2pvf_A Fibroblast growth facto 100.0 1.5E-36 5.1E-41 337.1 15.4 247 690-950 36-316 (334)
148 3cok_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 324.9 17.9 242 689-945 11-262 (278)
149 3g33_A Cell division protein k 100.0 2.4E-36 8.3E-41 331.4 16.8 252 689-946 9-297 (308)
150 3f3z_A Calcium/calmodulin-depe 100.0 3.4E-36 1.2E-40 324.8 17.5 248 686-945 6-261 (277)
151 2id5_A Lingo-1, leucine rich r 100.0 3.5E-35 1.2E-39 343.0 27.3 312 64-377 12-332 (477)
152 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-36 4.9E-41 329.9 14.6 250 691-952 26-288 (289)
153 2ozo_A Tyrosine-protein kinase 100.0 2E-36 6.7E-41 361.7 17.1 240 698-950 343-596 (613)
154 3a62_A Ribosomal protein S6 ki 100.0 2.3E-36 7.8E-41 334.2 16.1 242 690-946 18-277 (327)
155 4eut_A Serine/threonine-protei 100.0 5.6E-36 1.9E-40 340.2 19.6 253 695-950 13-307 (396)
156 3kk8_A Calcium/calmodulin depe 100.0 4.8E-36 1.6E-40 324.9 18.1 247 689-946 6-262 (284)
157 3q60_A ROP5B; pseudokinase, tr 100.0 1.7E-36 5.9E-41 341.6 14.7 243 695-945 66-352 (371)
158 1byg_A CSK, protein (C-termina 100.0 4.1E-36 1.4E-40 324.4 16.9 246 690-952 22-273 (278)
159 3pls_A Macrophage-stimulating 100.0 4.1E-36 1.4E-40 327.9 17.0 245 695-950 25-285 (298)
160 3lxl_A Tyrosine-protein kinase 100.0 1.6E-36 5.5E-41 335.8 13.9 253 695-952 27-303 (327)
161 3lxp_A Non-receptor tyrosine-p 100.0 2.2E-36 7.5E-41 333.2 14.9 251 695-950 35-308 (318)
162 2a19_B Interferon-induced, dou 100.0 1.3E-36 4.5E-41 329.3 12.8 245 687-953 9-275 (284)
163 3i6u_A CDS1, serine/threonine- 100.0 2.6E-36 8.9E-41 345.0 16.0 251 685-946 131-400 (419)
164 3ork_A Serine/threonine protei 100.0 3.6E-37 1.2E-41 338.4 8.5 252 686-948 9-277 (311)
165 2i0e_A Protein kinase C-beta I 100.0 3.5E-36 1.2E-40 334.9 16.6 241 690-945 21-276 (353)
166 4ejn_A RAC-alpha serine/threon 100.0 1.9E-36 6.4E-41 349.8 14.8 241 690-945 149-404 (446)
167 4aw2_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 346.7 13.4 246 690-946 75-339 (437)
168 1u5q_A Serine/threonine protei 100.0 2.3E-36 7.8E-41 336.6 14.6 241 689-946 54-306 (348)
169 3f66_A Hepatocyte growth facto 100.0 4.3E-36 1.5E-40 327.8 16.5 248 693-951 27-290 (298)
170 2ac3_A MAP kinase-interacting 100.0 7.8E-36 2.7E-40 328.6 18.7 246 697-946 19-296 (316)
171 3dbq_A Dual specificity protei 100.0 3.8E-36 1.3E-40 334.9 16.3 239 695-946 13-274 (343)
172 3op5_A Serine/threonine-protei 100.0 2.1E-36 7.1E-41 340.0 14.2 250 690-950 36-327 (364)
173 3bhy_A Death-associated protei 100.0 6.2E-36 2.1E-40 323.9 17.3 246 689-945 5-265 (283)
174 3mwu_A Calmodulin-domain prote 100.0 1.3E-35 4.6E-40 346.6 21.4 250 685-946 18-277 (486)
175 3byv_A Rhoptry kinase; malaria 100.0 1.3E-36 4.3E-41 343.4 12.2 231 695-945 77-359 (377)
176 2zmd_A Dual specificity protei 100.0 9.5E-36 3.3E-40 337.0 19.4 239 695-946 60-321 (390)
177 4fl3_A Tyrosine-protein kinase 100.0 2E-36 6.8E-41 362.4 14.6 241 697-950 375-629 (635)
178 3gni_B Strad alpha; kinase fol 100.0 8.6E-36 3E-40 338.3 19.0 252 690-946 26-334 (389)
179 2r5t_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 337.0 15.8 238 690-942 39-286 (373)
180 2eue_A Carbon catabolite derep 100.0 4.9E-36 1.7E-40 323.2 16.2 241 689-945 13-262 (275)
181 2jam_A Calcium/calmodulin-depe 100.0 5.3E-36 1.8E-40 328.0 16.7 249 686-945 6-261 (304)
182 2vd5_A DMPK protein; serine/th 100.0 1.7E-36 5.8E-41 343.7 13.0 245 690-946 62-328 (412)
183 2acx_A G protein-coupled recep 100.0 2.8E-36 9.5E-41 352.1 15.1 245 691-946 186-445 (576)
184 3llt_A Serine/threonine kinase 100.0 4.7E-36 1.6E-40 336.8 16.5 192 689-887 35-261 (360)
185 1mqb_A Ephrin type-A receptor 100.0 4.5E-36 1.5E-40 332.8 16.0 244 695-950 48-307 (333)
186 3oz6_A Mitogen-activated prote 100.0 3.7E-36 1.3E-40 341.1 15.6 255 686-946 6-329 (388)
187 2y7j_A Phosphorylase B kinase 100.0 5.9E-36 2E-40 335.9 17.0 248 688-946 93-360 (365)
188 1p4o_A Insulin-like growth fac 100.0 1.1E-35 3.7E-40 328.4 18.9 249 690-952 26-299 (322)
189 3cc6_A Protein tyrosine kinase 100.0 8.9E-36 3E-40 322.3 17.7 247 690-951 13-272 (281)
190 4agu_A Cyclin-dependent kinase 100.0 6.6E-36 2.3E-40 328.4 16.9 253 689-946 3-285 (311)
191 3o6n_A APL1; leucine-rich repe 100.0 1.2E-34 4.3E-39 328.9 27.8 310 100-451 44-353 (390)
192 3eqc_A Dual specificity mitoge 100.0 5.2E-36 1.8E-40 336.5 16.1 249 691-945 35-324 (360)
193 3lzb_A Epidermal growth factor 100.0 5.8E-36 2E-40 330.9 16.3 244 695-951 19-277 (327)
194 2xir_A Vascular endothelial gr 100.0 3.2E-36 1.1E-40 331.8 14.0 249 690-951 28-309 (316)
195 3brb_A Proto-oncogene tyrosine 100.0 8.1E-36 2.8E-40 328.0 17.2 244 695-950 38-306 (313)
196 1fvr_A Tyrosine-protein kinase 100.0 5.1E-36 1.7E-40 331.8 15.5 247 690-950 26-298 (327)
197 3lij_A Calcium/calmodulin depe 100.0 1.5E-35 5E-40 346.8 20.1 248 686-945 34-291 (494)
198 2h34_A Serine/threonine-protei 100.0 8.6E-36 2.9E-40 327.0 16.8 253 688-952 33-296 (309)
199 1u59_A Tyrosine-protein kinase 100.0 9.4E-36 3.2E-40 323.1 16.9 241 697-950 16-270 (287)
200 3oja_B Anopheles plasmodium-re 100.0 1.2E-34 4E-39 347.4 28.1 311 100-452 50-360 (597)
201 2w1i_A JAK2; chromosomal rearr 100.0 4.7E-36 1.6E-40 331.8 14.7 252 695-951 45-321 (326)
202 1t4h_A Serine/threonine-protei 100.0 2.2E-35 7.5E-40 320.8 19.7 243 695-946 30-283 (290)
203 4hgt_A Casein kinase I isoform 100.0 5.7E-36 1.9E-40 326.4 15.1 252 689-950 9-278 (296)
204 2i1m_A Macrophage colony-stimu 100.0 3.4E-36 1.1E-40 334.2 13.4 245 695-950 50-324 (333)
205 2xrw_A Mitogen-activated prote 100.0 2.9E-35 9.9E-40 331.3 21.1 252 689-946 25-319 (371)
206 2vgo_A Serine/threonine-protei 100.0 1.5E-35 5.1E-40 321.1 18.0 241 690-945 15-262 (284)
207 2buj_A Serine/threonine-protei 100.0 6.9E-36 2.4E-40 329.2 15.5 250 695-954 33-308 (317)
208 3uzp_A CKI-delta, CKID, casein 100.0 6.8E-36 2.3E-40 325.8 15.2 252 689-950 9-278 (296)
209 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.4E-36 1.2E-40 333.2 13.0 252 688-945 33-318 (329)
210 2yex_A Serine/threonine-protei 100.0 2.6E-35 8.9E-40 317.7 19.3 247 688-946 6-262 (276)
211 3nyv_A Calmodulin-domain prote 100.0 8.2E-36 2.8E-40 348.5 16.4 247 687-945 24-281 (484)
212 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.1E-35 3.7E-40 346.6 17.2 244 691-945 187-448 (543)
213 3q5i_A Protein kinase; CDPK, m 100.0 1.6E-35 5.5E-40 347.3 18.8 247 687-945 34-301 (504)
214 2v62_A Serine/threonine-protei 100.0 3.4E-36 1.2E-40 335.6 12.3 251 690-951 38-327 (345)
215 3rp9_A Mitogen-activated prote 100.0 1.2E-35 4.1E-40 344.5 17.3 187 689-881 53-280 (458)
216 1xbb_A Tyrosine-protein kinase 100.0 1E-35 3.5E-40 323.6 15.6 243 695-950 20-277 (291)
217 3lm5_A Serine/threonine-protei 100.0 1.4E-35 4.8E-40 328.1 16.7 241 697-946 35-288 (327)
218 3kvw_A DYRK2, dual specificity 100.0 8E-36 2.7E-40 341.9 15.1 193 689-888 97-302 (429)
219 2yfx_A Tyrosine-protein kinase 100.0 1.5E-35 5.2E-40 327.9 16.7 248 690-951 31-303 (327)
220 1vzo_A Ribosomal protein S6 ki 100.0 4.6E-36 1.6E-40 335.6 12.5 246 690-946 55-322 (355)
221 2w5a_A Serine/threonine-protei 100.0 6.6E-36 2.3E-40 322.9 13.3 253 689-952 6-274 (279)
222 4aaa_A Cyclin-dependent kinase 100.0 9.2E-36 3.2E-40 330.2 14.7 252 689-945 25-306 (331)
223 2jii_A Serine/threonine-protei 100.0 1.9E-36 6.3E-41 338.8 9.1 250 690-950 43-334 (352)
224 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.1E-35 1E-39 330.7 19.0 237 695-950 69-337 (365)
225 3mtl_A Cell division protein k 100.0 4.1E-36 1.4E-40 331.9 11.5 248 695-946 6-282 (324)
226 1x8b_A WEE1HU, WEE1-like prote 100.0 1.5E-35 5.2E-40 321.6 15.8 240 688-946 10-280 (289)
227 3nsz_A CK II alpha, casein kin 100.0 1.7E-35 5.9E-40 328.1 16.4 249 690-946 37-320 (330)
228 1cm8_A Phosphorylated MAP kina 100.0 1.7E-35 5.7E-40 332.3 16.1 251 689-946 25-308 (367)
229 3a7i_A MST3 kinase, serine/thr 100.0 3.8E-35 1.3E-39 321.1 18.3 243 690-946 23-271 (303)
230 2vwi_A Serine/threonine-protei 100.0 8E-36 2.7E-40 326.4 12.7 246 695-945 19-287 (303)
231 1phk_A Phosphorylase kinase; g 100.0 3.6E-35 1.2E-39 320.4 17.5 247 688-945 16-283 (298)
232 2rku_A Serine/threonine-protei 100.0 3E-35 1E-39 320.3 16.8 243 689-946 15-266 (294)
233 2owb_A Serine/threonine-protei 100.0 2.8E-35 9.5E-40 326.8 16.6 242 689-945 41-291 (335)
234 2clq_A Mitogen-activated prote 100.0 4.3E-35 1.5E-39 319.3 17.8 241 695-945 26-278 (295)
235 2h6d_A 5'-AMP-activated protei 100.0 3.5E-35 1.2E-39 316.7 16.6 239 695-946 15-262 (276)
236 1ua2_A CAK, cell division prot 100.0 1.2E-35 4.2E-40 331.2 13.2 253 688-946 9-292 (346)
237 3uqc_A Probable conserved tran 100.0 2.6E-35 9.1E-40 318.6 15.3 230 689-952 31-265 (286)
238 2pml_X PFPK7, Ser/Thr protein 100.0 2.2E-35 7.4E-40 329.8 15.0 250 690-946 32-323 (348)
239 2j7t_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 321.4 15.9 246 689-946 19-276 (302)
240 2ycf_A Serine/threonine-protei 100.0 2.2E-35 7.7E-40 325.8 14.6 249 685-945 6-274 (322)
241 3mi9_A Cell division protein k 100.0 4.4E-35 1.5E-39 327.7 16.9 252 688-946 16-312 (351)
242 3ll6_A Cyclin G-associated kin 100.0 5.6E-35 1.9E-39 324.8 17.6 241 694-950 31-306 (337)
243 1zy4_A Serine/threonine-protei 100.0 4.6E-35 1.6E-39 320.2 16.6 246 688-946 5-284 (303)
244 3com_A Serine/threonine-protei 100.0 6.1E-35 2.1E-39 321.2 17.6 243 690-945 30-278 (314)
245 2r3i_A Cell division protein k 100.0 3.9E-35 1.3E-39 320.4 15.8 252 695-950 7-290 (299)
246 3fme_A Dual specificity mitoge 100.0 5.6E-35 1.9E-39 317.6 16.8 244 690-945 8-266 (290)
247 3n9x_A Phosphotransferase; mal 100.0 2.2E-35 7.5E-40 339.0 14.1 193 688-886 25-253 (432)
248 1u46_A ACK-1, activated CDC42 100.0 3.2E-35 1.1E-39 319.6 14.7 250 690-953 19-285 (291)
249 4fcg_A Uncharacterized protein 100.0 5.3E-35 1.8E-39 322.8 16.4 280 22-328 23-312 (328)
250 3pfq_A PKC-B, PKC-beta, protei 100.0 4.6E-35 1.6E-39 353.0 17.3 241 690-945 342-597 (674)
251 2wei_A Calmodulin-domain prote 100.0 1.4E-34 4.8E-39 313.9 19.2 248 686-945 19-276 (287)
252 1wak_A Serine/threonine-protei 100.0 4.5E-35 1.5E-39 333.5 16.0 252 689-946 37-392 (397)
253 2fst_X Mitogen-activated prote 100.0 2E-35 6.8E-40 331.3 12.1 251 689-946 29-312 (367)
254 3rgf_A Cyclin-dependent kinase 100.0 2.8E-35 9.5E-40 335.8 13.4 188 696-888 26-239 (405)
255 4exu_A Mitogen-activated prote 100.0 5.5E-35 1.9E-39 329.0 15.3 251 689-946 42-324 (371)
256 3sv0_A Casein kinase I-like; t 100.0 5.9E-35 2E-39 337.4 15.7 252 689-950 7-276 (483)
257 3fhr_A MAP kinase-activated pr 100.0 5.9E-35 2E-39 324.1 14.1 249 687-945 26-287 (336)
258 3an0_A Dual specificity mitoge 100.0 5.3E-35 1.8E-39 325.5 13.5 241 695-945 55-310 (340)
259 3eb0_A Putative uncharacterize 100.0 2.2E-34 7.6E-39 325.7 18.8 247 690-945 8-321 (383)
260 3pg1_A Mitogen-activated prote 100.0 4.7E-35 1.6E-39 328.9 13.2 252 689-946 22-317 (362)
261 2x7f_A TRAF2 and NCK-interacti 100.0 6.9E-35 2.3E-39 322.6 14.2 244 689-945 24-286 (326)
262 3coi_A Mitogen-activated prote 100.0 1.5E-34 5.2E-39 323.5 17.0 251 689-946 24-306 (353)
263 2j0j_A Focal adhesion kinase 1 100.0 1.4E-34 4.7E-39 347.8 17.5 243 695-950 394-649 (656)
264 3e3p_A Protein kinase, putativ 100.0 1.1E-34 3.8E-39 325.7 15.2 255 686-946 20-315 (360)
265 3qyz_A Mitogen-activated prote 100.0 1.3E-34 4.3E-39 325.4 15.7 252 689-946 27-314 (364)
266 1z57_A Dual specificity protei 100.0 1.3E-34 4.4E-39 322.1 15.3 256 689-951 14-336 (339)
267 4e7w_A Glycogen synthase kinas 100.0 1.7E-34 5.9E-39 327.4 16.5 250 695-950 44-328 (394)
268 2wtk_C Serine/threonine-protei 100.0 2.9E-34 1E-38 314.3 17.7 242 689-946 5-264 (305)
269 2vx3_A Dual specificity tyrosi 100.0 1.1E-34 3.7E-39 328.2 14.3 196 688-888 53-261 (382)
270 1ogq_A PGIP-2, polygalacturona 100.0 8.7E-35 3E-39 319.1 12.9 252 101-379 50-306 (313)
271 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.1E-35 1.8E-39 322.6 11.0 245 695-953 37-303 (319)
272 2i6l_A Mitogen-activated prote 100.0 1.9E-34 6.7E-39 318.0 15.4 249 689-945 11-305 (320)
273 1j1b_A Glycogen synthase kinas 100.0 2.7E-34 9.3E-39 328.4 17.0 246 694-946 57-337 (420)
274 2b9h_A MAP kinase FUS3, mitoge 100.0 1.2E-34 4.2E-39 324.4 13.6 252 689-946 11-306 (353)
275 3aln_A Dual specificity mitoge 100.0 2.2E-34 7.4E-39 318.7 15.3 243 695-945 26-285 (327)
276 2rio_A Serine/threonine-protei 100.0 5E-34 1.7E-38 327.7 17.8 240 695-945 19-295 (434)
277 1blx_A Cyclin-dependent kinase 100.0 5.4E-34 1.8E-38 315.4 17.2 252 689-946 11-297 (326)
278 3o6n_A APL1; leucine-rich repe 100.0 8.7E-33 3E-37 313.7 27.6 337 171-622 43-379 (390)
279 3a99_A Proto-oncogene serine/t 100.0 1.2E-34 4.1E-39 319.5 11.7 237 689-946 43-294 (320)
280 3m2w_A MAP kinase-activated pr 100.0 4E-34 1.4E-38 312.2 15.6 231 684-946 12-257 (299)
281 3cek_A Dual specificity protei 100.0 5.4E-34 1.8E-38 313.5 16.1 241 691-946 30-293 (313)
282 1q8y_A SR protein kinase; tran 100.0 3.5E-34 1.2E-38 323.3 14.4 251 690-946 20-334 (373)
283 3oja_B Anopheles plasmodium-re 100.0 5.2E-33 1.8E-37 333.1 24.9 308 123-472 49-356 (597)
284 2dyl_A Dual specificity mitoge 100.0 1.1E-33 3.8E-38 311.7 16.8 244 690-945 26-283 (318)
285 3p23_A Serine/threonine-protei 100.0 6.3E-34 2.2E-38 325.8 15.1 239 694-945 27-283 (432)
286 2iwi_A Serine/threonine-protei 100.0 2.6E-34 8.7E-39 315.9 11.0 238 688-946 30-284 (312)
287 2eu9_A Dual specificity protei 100.0 1.1E-33 3.9E-38 316.7 15.5 250 689-945 19-333 (355)
288 4fmz_A Internalin; leucine ric 100.0 3.8E-32 1.3E-36 303.4 26.5 302 100-472 43-344 (347)
289 3qa8_A MGC80376 protein; kinas 100.0 1.1E-33 3.9E-38 332.8 14.6 250 689-943 14-295 (676)
290 4fmz_A Internalin; leucine ric 100.0 7E-32 2.4E-36 301.2 26.8 302 76-450 45-346 (347)
291 2pzi_A Probable serine/threoni 100.0 5.3E-33 1.8E-37 337.6 15.5 236 689-949 80-325 (681)
292 2ft3_A Biglycan; proteoglycan, 100.0 2.7E-31 9.3E-36 294.3 26.0 290 62-376 32-331 (332)
293 1xku_A Decorin; proteoglycan, 100.0 8.7E-31 3E-35 290.1 28.5 292 61-376 29-330 (330)
294 3dzo_A Rhoptry kinase domain; 100.0 1.9E-32 6.4E-37 312.5 12.4 231 695-945 82-363 (413)
295 1xku_A Decorin; proteoglycan, 100.0 2.5E-30 8.4E-35 286.4 29.0 291 102-424 32-330 (330)
296 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-30 7.1E-35 287.2 26.4 293 126-447 34-330 (332)
297 1z7x_W Ribonuclease inhibitor; 100.0 1.9E-34 6.4E-39 335.4 -15.5 351 101-471 3-408 (461)
298 2vuw_A Serine/threonine-protei 100.0 8.7E-32 3E-36 298.9 4.0 239 689-944 20-329 (336)
299 2z80_A TOLL-like receptor 2, v 100.0 2.6E-30 8.7E-35 289.1 15.3 284 60-380 27-316 (353)
300 1z7x_W Ribonuclease inhibitor; 100.0 1.5E-33 5.1E-38 327.8 -13.8 376 125-522 3-440 (461)
301 2z66_A Variable lymphocyte rec 100.0 6.1E-30 2.1E-34 280.1 14.5 254 60-331 4-262 (306)
302 4fcg_A Uncharacterized protein 100.0 1.5E-28 5E-33 271.1 20.0 235 123-377 79-313 (328)
303 2z80_A TOLL-like receptor 2, v 100.0 4.3E-29 1.5E-33 279.1 14.6 274 106-406 36-318 (353)
304 2z66_A Variable lymphocyte rec 100.0 7.4E-29 2.5E-33 271.5 15.2 248 104-355 10-262 (306)
305 3ogk_B Coronatine-insensitive 100.0 3.8E-31 1.3E-35 317.8 -7.4 401 123-590 110-547 (592)
306 3zyi_A Leucine-rich repeat-con 100.0 3.2E-27 1.1E-31 273.2 25.1 228 101-354 75-303 (452)
307 3zyi_A Leucine-rich repeat-con 100.0 3.6E-27 1.2E-31 272.8 24.6 235 117-379 69-304 (452)
308 3zyj_A Leucine-rich repeat-con 100.0 5.6E-27 1.9E-31 270.2 25.5 228 101-354 64-292 (440)
309 1ozn_A Reticulon 4 receptor; N 100.0 1E-27 3.4E-32 259.5 17.7 208 100-331 31-239 (285)
310 1wwl_A Monocyte differentiatio 99.9 4E-29 1.4E-33 274.1 6.5 243 103-355 45-310 (312)
311 3zyj_A Leucine-rich repeat-con 99.9 7.2E-27 2.4E-31 269.3 25.4 236 116-379 57-293 (440)
312 1wwl_A Monocyte differentiatio 99.9 6.4E-29 2.2E-33 272.4 4.9 250 120-379 38-310 (312)
313 3ogk_B Coronatine-insensitive 99.9 1E-30 3.5E-35 314.0 -10.3 278 100-379 111-421 (592)
314 1ozn_A Reticulon 4 receptor; N 99.9 6.3E-27 2.1E-31 253.3 17.6 226 104-356 14-240 (285)
315 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-28 4.4E-33 270.7 3.9 267 103-383 12-281 (317)
316 3g06_A SSPH2 (leucine-rich rep 99.9 2.5E-26 8.4E-31 272.5 22.0 284 42-379 9-298 (622)
317 2o6q_A Variable lymphocyte rec 99.9 1.3E-25 4.5E-30 240.7 24.2 215 60-304 2-216 (270)
318 4azs_A Methyltransferase WBDD; 99.9 7.9E-28 2.7E-32 283.6 3.6 181 699-884 242-437 (569)
319 3g06_A SSPH2 (leucine-rich rep 99.9 8.8E-25 3E-29 259.2 28.6 269 101-461 40-308 (622)
320 3oja_A Leucine-rich immune mol 99.9 4.1E-27 1.4E-31 273.8 7.6 234 126-373 35-270 (487)
321 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-27 8.5E-32 260.4 5.0 268 151-480 12-281 (317)
322 3oja_A Leucine-rich immune mol 99.9 9.8E-27 3.4E-31 270.6 8.6 236 100-349 33-270 (487)
323 2z62_A TOLL-like receptor 4, v 99.9 1.5E-24 5.2E-29 233.3 21.4 206 101-331 28-238 (276)
324 2z62_A TOLL-like receptor 4, v 99.9 1E-24 3.5E-29 234.7 19.1 209 76-308 29-239 (276)
325 3rfs_A Internalin B, repeat mo 99.9 1.8E-24 6E-29 232.1 13.5 227 102-365 20-246 (272)
326 3rfs_A Internalin B, repeat mo 99.9 1.1E-23 3.8E-28 225.8 16.8 207 100-341 40-246 (272)
327 2o6q_A Variable lymphocyte rec 99.9 1.1E-22 3.6E-27 218.0 24.1 203 125-354 16-218 (270)
328 3m19_A Variable lymphocyte rec 99.9 5.4E-23 1.9E-27 217.7 20.0 143 61-211 3-145 (251)
329 2p1m_B Transport inhibitor res 99.9 1.8E-27 6.2E-32 285.8 -16.7 433 100-591 65-541 (594)
330 2p1m_B Transport inhibitor res 99.9 7.8E-27 2.7E-31 280.3 -11.3 402 100-571 104-545 (594)
331 4glp_A Monocyte differentiatio 99.9 1.9E-23 6.4E-28 228.7 16.1 223 101-329 64-306 (310)
332 1p9a_G Platelet glycoprotein I 99.9 2.4E-22 8.2E-27 217.2 22.0 202 121-353 6-207 (290)
333 2ast_B S-phase kinase-associat 99.9 4.7E-25 1.6E-29 244.7 -0.3 214 60-279 34-257 (336)
334 1p9a_G Platelet glycoprotein I 99.9 2.8E-22 9.6E-27 216.7 21.2 203 145-378 6-208 (290)
335 3en9_A Glycoprotease, O-sialog 99.9 1.5E-23 5E-28 245.8 9.1 179 695-885 340-538 (540)
336 2xwt_C Thyrotropin receptor; s 99.9 1.3E-22 4.4E-27 213.2 15.3 197 101-327 31-236 (239)
337 3goz_A Leucine-rich repeat-con 99.9 3E-24 1E-28 240.5 2.3 226 105-330 2-266 (362)
338 2ast_B S-phase kinase-associat 99.9 4.8E-24 1.7E-28 236.5 1.7 220 102-327 48-282 (336)
339 2ca6_A RAN GTPase-activating p 99.9 1.2E-24 4.1E-29 246.2 -4.4 94 117-210 24-135 (386)
340 4glp_A Monocyte differentiatio 99.9 1.7E-22 5.8E-27 221.1 12.8 202 100-307 90-308 (310)
341 2o6s_A Variable lymphocyte rec 99.9 6.7E-22 2.3E-26 202.9 15.9 187 60-270 4-190 (208)
342 2xwt_C Thyrotropin receptor; s 99.9 5.9E-22 2E-26 208.1 15.7 198 125-352 31-237 (239)
343 3goz_A Leucine-rich repeat-con 99.9 1.2E-23 4.2E-28 235.5 1.5 252 129-380 2-299 (362)
344 2ca6_A RAN GTPase-activating p 99.9 9.6E-24 3.3E-28 238.8 -0.7 233 100-332 31-318 (386)
345 3m19_A Variable lymphocyte rec 99.9 8.3E-21 2.8E-25 200.9 20.6 110 102-214 15-124 (251)
346 1h6u_A Internalin H; cell adhe 99.9 3.6E-21 1.2E-25 210.0 16.6 192 100-331 40-231 (308)
347 1h6u_A Internalin H; cell adhe 99.9 3.8E-21 1.3E-25 209.9 16.7 209 105-355 23-231 (308)
348 3cvr_A Invasion plasmid antige 99.9 8E-22 2.7E-26 230.9 12.1 193 103-340 61-253 (571)
349 4ay9_X Follicle-stimulating ho 99.8 2.4E-20 8.1E-25 207.7 18.3 246 61-351 7-256 (350)
350 2o6s_A Variable lymphocyte rec 99.8 3.9E-20 1.3E-24 189.7 16.8 177 104-290 10-186 (208)
351 4ay9_X Follicle-stimulating ho 99.8 4.1E-20 1.4E-24 205.7 17.8 239 106-376 14-257 (350)
352 1zar_A RIO2 kinase; serine kin 99.8 3.1E-21 1.1E-25 207.1 7.3 130 695-837 94-242 (282)
353 3cvr_A Invasion plasmid antige 99.8 1.2E-19 3.9E-24 212.6 18.5 187 126-364 60-253 (571)
354 3e6j_A Variable lymphocyte rec 99.8 3.8E-19 1.3E-23 185.1 17.5 159 60-236 16-174 (229)
355 4b8c_D Glucose-repressible alc 99.8 1E-20 3.4E-25 230.0 4.1 264 24-330 130-404 (727)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 7.7E-19 2.6E-23 181.4 17.2 161 60-237 8-169 (220)
357 2v9t_B SLIT homolog 2 protein 99.8 9.8E-19 3.4E-23 180.6 17.5 158 60-234 8-165 (220)
358 1m9s_A Internalin B; cell inva 99.8 5.7E-19 1.9E-23 209.2 14.3 190 102-307 22-211 (605)
359 1h6t_A Internalin B; cell adhe 99.8 5E-19 1.7E-23 191.3 11.1 188 103-330 26-213 (291)
360 1h6t_A Internalin B; cell adhe 99.8 1.8E-18 6.1E-23 186.9 15.3 170 100-283 45-214 (291)
361 2xot_A Amphoterin-induced prot 99.8 2E-18 6.8E-23 192.9 15.5 161 101-282 39-202 (361)
362 2v9t_B SLIT homolog 2 protein 99.8 3.8E-18 1.3E-22 176.2 16.5 150 105-257 15-164 (220)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-18 9E-23 177.4 15.1 152 104-258 14-166 (220)
364 2xot_A Amphoterin-induced prot 99.8 1.6E-18 5.5E-23 193.6 14.1 175 106-307 23-203 (361)
365 1dce_A Protein (RAB geranylger 99.8 1.8E-21 6.2E-26 229.2 -10.8 203 122-347 346-566 (567)
366 1m9s_A Internalin B; cell inva 99.8 4.7E-18 1.6E-22 201.3 17.8 178 100-291 42-219 (605)
367 3e6j_A Variable lymphocyte rec 99.8 1.2E-17 4.2E-22 173.6 17.9 151 105-259 23-173 (229)
368 4ezg_A Putative uncharacterize 99.7 1.1E-17 3.8E-22 169.7 13.0 155 121-282 40-194 (197)
369 4b8c_D Glucose-repressible alc 99.7 5.3E-19 1.8E-23 214.9 2.3 216 101-356 173-406 (727)
370 1dce_A Protein (RAB geranylger 99.7 1.2E-20 3.9E-25 222.4 -12.3 204 146-372 346-567 (567)
371 1zth_A RIO1 serine protein kin 99.7 3.4E-18 1.2E-22 181.2 7.6 134 694-837 50-219 (258)
372 1xeu_A Internalin C; cellular 99.7 5.7E-18 2E-22 180.0 8.5 170 100-284 18-187 (263)
373 4ezg_A Putative uncharacterize 99.7 1.9E-17 6.5E-22 167.9 10.9 153 100-259 43-195 (197)
374 1xeu_A Internalin C; cellular 99.7 5.8E-18 2E-22 179.9 4.7 169 123-306 17-185 (263)
375 1w8a_A SLIT protein; signaling 99.7 1.4E-16 4.9E-21 160.6 14.3 138 60-214 5-143 (192)
376 1w8a_A SLIT protein; signaling 99.7 2.1E-16 7E-21 159.4 13.8 132 104-238 11-143 (192)
377 2o6r_A Variable lymphocyte rec 99.7 9.6E-16 3.3E-20 152.4 14.7 138 60-214 4-141 (177)
378 2je0_A Acidic leucine-rich nuc 99.6 3.1E-16 1.1E-20 151.1 8.9 128 100-229 16-148 (149)
379 2ell_A Acidic leucine-rich nuc 99.6 6.3E-16 2.1E-20 152.3 11.2 132 100-233 23-159 (168)
380 3sb4_A Hypothetical leucine ri 99.6 1.6E-16 5.5E-21 175.0 6.0 262 100-372 24-328 (329)
381 2wfh_A SLIT homolog 2 protein 99.6 3.6E-15 1.2E-19 150.3 14.5 110 101-211 31-140 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 1.2E-15 4.3E-20 150.2 10.4 133 124-258 23-160 (168)
383 2wfh_A SLIT homolog 2 protein 99.6 5.5E-15 1.9E-19 148.9 14.6 126 106-235 15-140 (193)
384 2je0_A Acidic leucine-rich nuc 99.6 9.2E-16 3.2E-20 147.8 8.0 128 124-253 16-148 (149)
385 2o6r_A Variable lymphocyte rec 99.6 7.8E-15 2.7E-19 145.8 14.6 133 103-238 9-141 (177)
386 4gyi_A RIO2 kinase; protein ki 99.6 3.6E-16 1.2E-20 171.4 3.1 136 691-835 95-263 (397)
387 3sb4_A Hypothetical leucine ri 99.5 1.8E-14 6.1E-19 158.7 12.8 240 100-348 48-328 (329)
388 1ds9_A Outer arm dynein; leuci 99.5 1.4E-16 4.8E-21 161.6 -8.2 134 100-238 17-157 (198)
389 4fdw_A Leucine rich hypothetic 99.5 1.2E-12 3.9E-17 147.4 21.6 263 100-375 112-380 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.5 4.9E-14 1.7E-18 139.8 8.8 104 101-209 19-125 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.5 8E-14 2.7E-18 138.3 9.3 134 119-258 13-153 (176)
392 3g39_A Variable lymphocyte rec 99.5 2.7E-13 9.1E-18 133.5 12.8 104 106-212 14-117 (170)
393 1ds9_A Outer arm dynein; leuci 99.5 3E-16 1E-20 159.2 -9.4 150 121-299 14-180 (198)
394 4fdw_A Leucine rich hypothetic 99.4 2.6E-12 8.7E-17 144.5 20.7 243 101-354 135-383 (401)
395 2r9u_A Variable lymphocyte rec 99.4 4.7E-13 1.6E-17 132.2 12.4 104 105-211 16-119 (174)
396 3g39_A Variable lymphocyte rec 99.4 1.9E-12 6.4E-17 127.4 12.6 107 127-236 11-117 (170)
397 2r9u_A Variable lymphocyte rec 99.4 3.8E-12 1.3E-16 125.7 12.8 104 128-234 15-118 (174)
398 2ifg_A High affinity nerve gro 99.2 2E-11 6.9E-16 135.3 12.5 93 117-211 24-117 (347)
399 4fs7_A Uncharacterized protein 99.2 5E-10 1.7E-14 126.2 24.0 323 100-465 70-392 (394)
400 4fs7_A Uncharacterized protein 99.2 1.8E-10 6E-15 130.0 20.1 334 113-490 59-392 (394)
401 2ifg_A High affinity nerve gro 99.2 2E-11 6.7E-16 135.4 11.2 110 62-187 7-117 (347)
402 3un9_A NLR family member X1; l 99.1 1.4E-12 4.6E-17 145.3 -4.2 164 100-283 71-253 (372)
403 3un9_A NLR family member X1; l 99.1 2E-12 6.9E-17 143.9 -4.4 170 124-313 71-259 (372)
404 3tm0_A Aminoglycoside 3'-phosp 99.1 3.4E-10 1.1E-14 120.0 10.1 137 695-835 18-212 (263)
405 1nd4_A Aminoglycoside 3'-phosp 99.0 4.1E-10 1.4E-14 119.1 9.5 128 700-835 29-213 (264)
406 3dxp_A Putative acyl-COA dehyd 98.9 2.7E-09 9.1E-14 118.7 10.9 141 695-836 42-248 (359)
407 4gt6_A Cell surface protein; l 98.9 1.6E-07 5.4E-12 105.7 24.8 124 102-230 65-191 (394)
408 3rw6_A Nuclear RNA export fact 98.9 1.4E-11 4.7E-16 128.8 -9.8 142 61-214 76-237 (267)
409 4gt6_A Cell surface protein; l 98.8 1.6E-07 5.6E-12 105.5 21.2 77 247-325 66-145 (394)
410 2ra8_A Uncharacterized protein 98.7 1.8E-09 6.3E-14 118.9 1.3 202 75-304 107-341 (362)
411 2ra8_A Uncharacterized protein 98.7 3.9E-09 1.3E-13 116.3 1.9 164 165-352 164-341 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.7 1.2E-08 4.1E-13 110.5 5.0 187 695-886 24-288 (304)
413 4h09_A Hypothetical leucine ri 98.4 2.1E-05 7.1E-10 87.8 24.4 299 101-437 46-356 (379)
414 4h09_A Hypothetical leucine ri 98.4 3E-05 1E-09 86.4 24.1 315 120-461 41-356 (379)
415 3rw6_A Nuclear RNA export fact 98.4 5.5E-08 1.9E-12 101.5 1.4 96 106-203 148-257 (267)
416 3r70_A Aminoglycoside phosphot 98.3 1.1E-06 3.6E-11 95.7 9.4 134 694-836 40-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.2 2E-07 6.7E-12 92.6 1.3 91 121-211 32-137 (185)
418 1io0_A Tropomodulin; LRR prote 98.2 1.3E-07 4.5E-12 93.8 -0.1 111 100-210 35-164 (185)
419 3d1u_A Putative fructosamine-3 98.2 2.6E-06 8.8E-11 90.8 8.5 134 695-834 19-214 (288)
420 3tdw_A Gentamicin resistance p 98.1 8.2E-06 2.8E-10 88.0 11.7 137 695-836 23-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.0 2.9E-05 9.8E-10 82.1 11.3 134 698-835 31-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.8 3.3E-05 1.1E-09 85.3 8.5 74 696-774 46-122 (362)
423 3ats_A Putative uncharacterize 97.7 2.3E-05 7.8E-10 86.6 5.5 80 696-775 25-122 (357)
424 3jr1_A Putative fructosamine-3 97.5 0.00038 1.3E-08 74.6 10.9 134 695-832 40-232 (312)
425 2q83_A YTAA protein; 2635576, 97.4 0.00035 1.2E-08 76.4 10.4 135 697-835 38-251 (346)
426 3e4g_A ATP synthase subunit S, 97.4 3.7E-05 1.3E-09 74.2 1.8 83 126-208 62-150 (176)
427 2olc_A MTR kinase, methylthior 97.4 0.0002 6.8E-09 80.2 7.6 74 696-771 35-120 (397)
428 3e4g_A ATP synthase subunit S, 97.2 8.4E-05 2.9E-09 71.7 1.3 83 149-231 61-149 (176)
429 2pyw_A Uncharacterized protein 97.0 0.0013 4.5E-08 74.1 9.3 73 695-770 38-122 (420)
430 3f7w_A Putative fructosamine-3 96.8 0.0013 4.3E-08 70.0 6.6 75 695-773 19-97 (288)
431 1zyl_A Hypothetical protein YI 96.7 0.0019 6.6E-08 70.0 6.7 135 698-835 33-222 (328)
432 3csv_A Aminoglycoside phosphot 96.6 0.0088 3E-07 64.9 11.1 32 805-836 182-217 (333)
433 3rfe_A Platelet glycoprotein I 96.4 0.003 1E-07 58.0 5.4 60 537-598 12-72 (130)
434 1pgv_A TMD-1, tropomodulin TMD 96.4 0.0012 4E-08 64.9 2.7 84 124-207 40-136 (197)
435 1pgv_A TMD-1, tropomodulin TMD 96.4 0.00076 2.6E-08 66.3 0.9 108 101-208 41-168 (197)
436 3rfe_A Platelet glycoprotein I 96.4 0.0054 1.9E-07 56.2 6.7 34 127-160 33-66 (130)
437 2ppq_A HSK, HK, homoserine kin 96.3 0.0029 9.8E-08 68.4 5.2 138 696-835 27-216 (322)
438 3dxq_A Choline/ethanolamine ki 95.9 0.0036 1.2E-07 66.9 3.4 71 696-773 23-95 (301)
439 1nw1_A Choline kinase (49.2 KD 95.7 0.0078 2.7E-07 67.7 5.4 73 696-773 78-159 (429)
440 3feg_A Choline/ethanolamine ki 95.7 0.021 7.2E-07 62.7 8.6 135 697-835 56-253 (379)
441 3c5i_A Choline kinase; choline 95.5 0.014 4.8E-07 64.3 6.4 73 697-773 39-121 (369)
442 2qg7_A Ethanolamine kinase PV0 95.2 0.021 7.1E-07 64.5 6.8 74 696-773 113-188 (458)
443 3i1a_A Spectinomycin phosphotr 94.7 0.11 3.7E-06 56.3 10.4 31 806-836 206-236 (339)
444 3mes_A Choline kinase; malaria 90.9 0.26 8.8E-06 54.8 6.3 74 696-773 75-157 (424)
445 3f2s_A CK, chetk-alpha, cholin 89.4 0.37 1.3E-05 53.0 5.9 29 807-835 245-279 (401)
446 2yle_A Protein spire homolog 1 83.6 8.8 0.0003 37.8 11.3 99 771-884 33-135 (229)
447 4ann_A ESSB; membrane protein, 75.7 5.3 0.00018 39.3 7.0 89 737-834 37-126 (215)
448 4ano_A ESSB; membrane protein, 72.6 8.7 0.0003 37.9 7.7 84 744-835 48-132 (219)
449 3cxl_A N-chimerin; SH2, RHO-GA 70.1 0.64 2.2E-05 52.4 -1.2 59 696-757 147-215 (463)
450 3g15_A CK, chetk-alpha, cholin 68.6 7.7 0.00026 42.6 7.2 29 808-836 246-280 (401)
451 1cja_A Protein (actin-fragmin 26.4 3.2E+02 0.011 28.6 10.2 75 760-836 156-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.8e-83 Score=791.62 Aligned_cols=592 Identities=32% Similarity=0.463 Sum_probs=485.8
Q ss_pred CCChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCcc---CCC-----
Q 002186 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGA---LPG----- 93 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~---~~~----- 93 (955)
++.++|++|||+||+++.||. .+++|..+ .+||+|.||+|+ +++|+.++|++.++.|. +++
T Consensus 8 ~~~~~~~~all~~k~~~~~~~-~l~~W~~~--------~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L 76 (768)
T 3rgz_A 8 QSLYREIHQLISFKDVLPDKN-LLPDWSSN--------KNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSL 76 (768)
T ss_dssp CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT--------SCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTC
T ss_pred cCCHHHHHHHHHHHhhCCCcc-cccCCCCC--------CCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhcc
Confidence 446789999999999999988 99999743 679999999998 68999999999999987 443
Q ss_pred ------------------CcchhcCCCCcEEECCCCcCcccCCc--cccCCCCCCEEEccCCcCCccCCccc-cCCCCCc
Q 002186 94 ------------------KPLRIFFNELVDLNLSHNSFSGQFPV--EIFNLTSLISLDISRNNFSGHFPGGI-QSLRNLL 152 (955)
Q Consensus 94 ------------------~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~ 152 (955)
.+.. +++|++|||++|.++|.+|. .++++++|++|||++|.+.+.+|..+ ..+++|+
T Consensus 77 ~~L~~l~~~~~~~~~l~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~ 154 (768)
T 3rgz_A 77 TGLESLFLSNSHINGSVSGFKC--SASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLE 154 (768)
T ss_dssp TTCCEEECTTSCEEECCCCCCC--CTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCS
T ss_pred CcccccCCcCCCcCCCchhhcc--CCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCC
Confidence 3333 68999999999999999998 89999999999999999988888765 7778888
Q ss_pred EEeCCCCCCCCCCchh---h----------------------cCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCC
Q 002186 153 VLDAFSNSFSGSVPAE---I----------------------SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 153 ~LdL~~N~l~~~~p~~---~----------------------~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (955)
+|||++|.+++..|.. + .++++|++|+|++|.+++.+|. |+++++|++|+|++|
T Consensus 155 ~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n 233 (768)
T 3rgz_A 155 VLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN 233 (768)
T ss_dssp EEECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS
T ss_pred EEECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC
Confidence 8888877777655543 2 4677888888888888887777 889999999999999
Q ss_pred CCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCC-CCCCEEEeccccccccCC
Q 002186 208 LLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL-TKLESLFLFRNQLAGQVP 286 (955)
Q Consensus 208 ~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l-~~L~~L~L~~N~l~~~~p 286 (955)
.+++.+|..++.+++|++|++++|.+.+.+|.. .+++|++|++++|.+++.+|..+..+ ++|++|++++|++++.+|
T Consensus 234 ~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p 311 (768)
T 3rgz_A 234 KLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVP 311 (768)
T ss_dssp CCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCC
T ss_pred cCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccc
Confidence 998888888888888888888888777665543 45555555555555555555444443 455555555555554444
Q ss_pred ccCcCCCccCEEEccCC-------------------------CCCCCCCcccCCCC-CCcEEecccccCCCCCccccCC-
Q 002186 287 WEFSRVTTLKSLDLSDN-------------------------RLSGPIPESFADLK-NLRLLSLMYNEMSGTVPESLVQ- 339 (955)
Q Consensus 287 ~~~~~l~~L~~L~Ls~N-------------------------~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~l~~- 339 (955)
..|..+++|++|++++| ++++.+|..+..++ +|+.|++++|++++.+|..+..
T Consensus 312 ~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~ 391 (768)
T 3rgz_A 312 PFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQN 391 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCS
T ss_pred hHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhc
Confidence 44444444444444444 44444444444444 4555555555555555555444
Q ss_pred -CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEE
Q 002186 340 -LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRL 418 (955)
Q Consensus 340 -l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L 418 (955)
+++|+.|++++|.+++.+|..++.+++|+.|++++|.+++.+|..+..+.+|+.|++++|.+.+.+|..+..+++|++|
T Consensus 392 ~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L 471 (768)
T 3rgz_A 392 PKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471 (768)
T ss_dssp TTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred ccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEE
Confidence 6677888888888888888888888899999999999998888888888899999999999999999999999999999
Q ss_pred ECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCccccc
Q 002186 419 RLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNI 498 (955)
Q Consensus 419 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l 498 (955)
++++|++++.+|..+.++++|++|++++|++++.+|..+..+++|++|++++| .+.|.+|..+..+++|+.|++++|.+
T Consensus 472 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~l~~l~~L~~L~Ls~N~l 550 (768)
T 3rgz_A 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN-SFSGNIPAELGDCRSLIWLDLNTNLF 550 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS-CCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred EecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC-cccCcCCHHHcCCCCCCEEECCCCcc
Confidence 99999999999999999999999999999999999999999999999999999 78889999999999999999999999
Q ss_pred CCCCCCC-----------------------------------------------------------------------Cc
Q 002186 499 TGNLPPF-----------------------------------------------------------------------KS 507 (955)
Q Consensus 499 ~~~~p~~-----------------------------------------------------------------------~~ 507 (955)
+|.+|.. ..
T Consensus 551 ~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~ 630 (768)
T 3rgz_A 551 NGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDN 630 (768)
T ss_dssp ESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSS
T ss_pred CCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhc
Confidence 8877731 23
Q ss_pred CCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEE
Q 002186 508 CKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLN 587 (955)
Q Consensus 508 ~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 587 (955)
++.|+.||+++|+++|.+|..++++++|+.|||++|+++|.+|..++++++|++||||+|+++|.+|..++.+++|++||
T Consensus 631 l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ 710 (768)
T 3rgz_A 631 NGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEID 710 (768)
T ss_dssp SBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEE
T ss_pred cccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEE
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcceeccCCcccccccCCCccCCCCCCCCCCCCCCCcccc
Q 002186 588 VSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPLQPCHASVA 630 (955)
Q Consensus 588 ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l~~c~~~~~ 630 (955)
+++|+++|.||.++++.+++..+|.|||++||.|+.+|....+
T Consensus 711 ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~~~ 753 (768)
T 3rgz_A 711 LSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNA 753 (768)
T ss_dssp CCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSCC-
T ss_pred CcCCcccccCCCchhhccCCHHHhcCCchhcCCCCcCCCCCcc
Confidence 9999999999999999999999999999999999999976543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.8e-65 Score=627.47 Aligned_cols=548 Identities=31% Similarity=0.446 Sum_probs=432.0
Q ss_pred Ccccc-ceeecCCCCcEEEE--EcCCCCCCcc-CCCC---cchh--cCCCCcEEECCCCcCcccCCccccCCCCCCEEEc
Q 002186 62 ACSWS-GVKCNKNNTIVVGI--NLSMKGLSGA-LPGK---PLRI--FFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDI 132 (955)
Q Consensus 62 ~c~w~-gv~C~~~~~~v~~l--~l~~~~l~g~-~~~~---~~~~--~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 132 (955)
.-+|. +..|+. |.+|+|- .+..-.+++. +.+. +... .+++|+.++++.|.+. .+|..|+++++|++|||
T Consensus 30 l~~W~~~~~~C~-w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~~~~~-~l~~~~~~l~~L~~L~L 107 (768)
T 3rgz_A 30 LPDWSSNKNPCT-FDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSNSHIN-GSVSGFKCSASLTSLDL 107 (768)
T ss_dssp STTCCTTSCGGG-STTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTTSCEE-ECCCCCCCCTTCCEEEC
T ss_pred ccCCCCCCCCcC-CcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCCcCCCcC-CCchhhccCCCCCEEEC
Confidence 45795 666765 7789984 0111122222 2222 1111 1345555566555553 35588999999999999
Q ss_pred cCCcCCccCCc--cccCCCCCcEEeCCCCCCCCCCchhh-cCCCcceEEEecCCCCcccCCCC-----------------
Q 002186 133 SRNNFSGHFPG--GIQSLRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQ----------------- 192 (955)
Q Consensus 133 s~N~l~~~~p~--~~~~l~~L~~LdL~~N~l~~~~p~~~-~~L~~L~~L~Ls~n~l~~~~p~~----------------- 192 (955)
++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|++|.+++..|..
T Consensus 108 s~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~ 187 (768)
T 3rgz_A 108 SRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISG 187 (768)
T ss_dssp CSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEETHHHHHHTTCCTTCCEEECCS
T ss_pred CCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCcCChhhhhhccCCCCCEEECCC
Confidence 99999999998 99999999999999999999888876 89999999999999998766543
Q ss_pred --------cCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 193 --------FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 193 --------~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
++++++|++|+|++|.+++.+|. ++.+++|++|++++|.+.+.+|..++++++|++|++++|.+++.+|..
T Consensus 188 n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~ 266 (768)
T 3rgz_A 188 NKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL 266 (768)
T ss_dssp SEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC
T ss_pred CcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc
Confidence 25778899999999999998887 999999999999999999999999999999999999999999988875
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCC-CccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccc-cCCCCC
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES-LVQLPS 342 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-l~~l~~ 342 (955)
.+++|++|++++|++++.+|..+... ++|++|+|++|++++.+|..|+.+++|+.|++++|+++|.+|.. +..+++
T Consensus 267 --~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~ 344 (768)
T 3rgz_A 267 --PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRG 344 (768)
T ss_dssp --CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTT
T ss_pred --ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCC
Confidence 89999999999999999999988775 99999999999999999999999999999999999999888865 888888
Q ss_pred ccEEEccCCcCcccCCcccCCCC-CCCeeecCCCccc--------------------------ccCCCCCCCCCccceee
Q 002186 343 LEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTNNFN--------------------------GSIPPDICSGGVLFKLI 395 (955)
Q Consensus 343 L~~L~L~~N~l~~~~p~~~~~~~-~L~~L~ls~N~l~--------------------------g~ip~~~~~~~~l~~l~ 395 (955)
|++|++++|.+++.+|..+..++ +|+.|++++|.++ +.+|..+..+..|+.|+
T Consensus 345 L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~ 424 (768)
T 3rgz_A 345 LKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLH 424 (768)
T ss_dssp CCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEE
T ss_pred CCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEE
Confidence 88888888888887777665554 4555555555554 45555555555666666
Q ss_pred ccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCC
Q 002186 396 LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG 475 (955)
Q Consensus 396 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~ 475 (955)
+++|.+++.+|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..+..+++|++|++++| .+.
T Consensus 425 Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N-~l~ 503 (768)
T 3rgz_A 425 LSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN-RLT 503 (768)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS-CCC
T ss_pred CcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCC-ccC
Confidence 6666666666666666666666666666666666666777777777777777777777777777777777777777 666
Q ss_pred CCCCcccCCCCccccccCcccccCCCCCCC-CcCCccceEeccccccccccCCCC-------------------------
Q 002186 476 GMIPAQTWSLPSLQNFSASACNITGNLPPF-KSCKSISVIESHMNNLSGTIPESV------------------------- 529 (955)
Q Consensus 476 ~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~-~~~~~l~~l~l~~N~l~g~~p~~~------------------------- 529 (955)
+.+|.++..+++|+.|++++|+++|.+|.. ..+++|+.|++++|.++|.+|..+
T Consensus 504 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (768)
T 3rgz_A 504 GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM 583 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSC
T ss_pred CcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccc
Confidence 777777777777777777777777777753 677888888888888877766533
Q ss_pred ---------------------------------------------CcccccceeeeccccccccchhhhcCCCCCcEEEC
Q 002186 530 ---------------------------------------------SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDL 564 (955)
Q Consensus 530 ---------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 564 (955)
..+++|+.|||++|+++|.+|..+++++.|++|||
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~L 663 (768)
T 3rgz_A 584 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663 (768)
T ss_dssp CTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeC
Confidence 33567888999999999999999999999999999
Q ss_pred CCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-ccccccCCCccCCCC
Q 002186 565 SHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNP 615 (955)
Q Consensus 565 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~ 615 (955)
++|+++|.+|..|+.+++|++||+|+|+++|.+|.. ..+..+....+.+|+
T Consensus 664 s~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 664 GHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE
T ss_pred cCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc
Confidence 999999999999999999999999999999999865 334445555666664
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.9e-58 Score=561.11 Aligned_cols=545 Identities=21% Similarity=0.181 Sum_probs=475.6
Q ss_pred CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEE
Q 002186 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (955)
..++.++++++.+.+..+..+.. +++|++|||++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|++|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 102 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTR--YSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTEL 102 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGG--GTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhC--CCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEE
Confidence 46888999999998866555666 7899999999999999999999999999999999999997766789999999999
Q ss_pred eCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhcc--CCCCCcEEeccccc
Q 002186 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGYNF 232 (955)
Q Consensus 155 dL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~n~ 232 (955)
+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|.+++..|..+. .+++|+.|++++|.
T Consensus 103 ~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~ 182 (680)
T 1ziw_A 103 HLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQ 182 (680)
T ss_dssp ECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCC
T ss_pred ECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCc
Confidence 9999999988788999999999999999999998899999999999999999999988887765 56899999999999
Q ss_pred ccCCCCccccCC---------------------------CCCcEEeccCCCCCCCCCccccCCCC--CCEEEeccccccc
Q 002186 233 YQGNIPWQLGNM---------------------------SEVQYLDIAGANLSGSIPKELSNLTK--LESLFLFRNQLAG 283 (955)
Q Consensus 233 l~g~~p~~~~~l---------------------------~~L~~L~Ls~n~l~~~~p~~l~~l~~--L~~L~L~~N~l~~ 283 (955)
+.+..|..+..+ ++|+.|++++|.+++..|..+.+++. |++|++++|++++
T Consensus 183 l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~ 262 (680)
T 1ziw_A 183 IKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNV 262 (680)
T ss_dssp CCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCE
T ss_pred ccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCc
Confidence 988888766544 56788888888888888888887754 9999999999999
Q ss_pred cCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC-----CCcc----ccCCCCCccEEEccCCcCc
Q 002186 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG-----TVPE----SLVQLPSLEILFIWNNYFS 354 (955)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-----~~p~----~l~~l~~L~~L~L~~N~l~ 354 (955)
..|..|..+++|++|++++|++++..|..|..+++|+.|++++|...+ .+|. .+..+++|++|++++|.++
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 263 VGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp ECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred cCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 888889999999999999999999889999999999999999876554 2333 6788999999999999999
Q ss_pred ccCCcccCCCCCCCeeecCCCccccc-CCCCC-C--CCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccc
Q 002186 355 GSLPENLGRNSKLRWVDVSTNNFNGS-IPPDI-C--SGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIP 430 (955)
Q Consensus 355 ~~~p~~~~~~~~L~~L~ls~N~l~g~-ip~~~-~--~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 430 (955)
+..|..+..+++|++|++++|.+.+. ++... . ....|+.+++++|++++..|..+..+++|+.|++++|++++.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 98888999999999999999986543 23222 1 12579999999999999999999999999999999999998776
Q ss_pred -hhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCC--CCCCcccCCCCccccccCcccccCCCCCC-CC
Q 002186 431 -LKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLG--GMIPAQTWSLPSLQNFSASACNITGNLPP-FK 506 (955)
Q Consensus 431 -~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~--~~~p~~~~~l~~L~~l~ls~n~l~~~~p~-~~ 506 (955)
..|.++++|++|++++|++.+..+..+..+++|++|++++| .+. +.+|..+..+++|+.|++++|++++..|. +.
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n-~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 501 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRV-ALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLE 501 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTS-CCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccc-cccccccCCcccccCCCCCEEECCCCCCCcCChhhhc
Confidence 68999999999999999999988999999999999999999 443 57888999999999999999999976665 58
Q ss_pred cCCccceEeccccccccccC--------CCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcC
Q 002186 507 SCKSISVIESHMNNLSGTIP--------ESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG 578 (955)
Q Consensus 507 ~~~~l~~l~l~~N~l~g~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 578 (955)
.+++|+.|++++|++++..+ ..+.++++|+.|+|++|+++...+..|.++++|+.|||++|++++..+..|.
T Consensus 502 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~ 581 (680)
T 1ziw_A 502 GLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFN 581 (680)
T ss_dssp TCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhC
Confidence 89999999999999986532 3478999999999999999966666899999999999999999998888899
Q ss_pred CCCCCcEEECCCCcceeccCCcc--cccccCCCccCCCCCCCCCCC
Q 002186 579 SCSSLTVLNVSFNDISGSIPSGK--VLRLMGSSAYAGNPKLCGAPL 622 (955)
Q Consensus 579 ~l~~L~~L~ls~N~l~g~ip~~~--~~~~~~~~~~~~n~~lcg~~l 622 (955)
.+++|++|++++|++++..|..- .+..+....+.+||..|+++.
T Consensus 582 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 582 NQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 99999999999999998665431 456677778999999998763
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=9.7e-57 Score=542.16 Aligned_cols=501 Identities=19% Similarity=0.174 Sum_probs=440.9
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..+++|||++|.+++..|..|.++++|++|+|++|++.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 36899999999999999999999999999999999999999999999999999999999999988999999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCc--EEeccCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ--YLDIAGANLS 258 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~--~L~Ls~n~l~ 258 (955)
++|.+++..|..|+++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..|..++++++|+ .|++++|.++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccC
Confidence 99999987788899999999999999999885444555599999999999999988888999999999 8999999999
Q ss_pred CCCCccccCCCCCCEEEecccccc--------------------------ccCCccCcCCC--ccCEEEccCCCCCCCCC
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLA--------------------------GQVPWEFSRVT--TLKSLDLSDNRLSGPIP 310 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~--------------------------~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 310 (955)
+..|..+.. .+|+.|++++|... ...+..|..+. +|+.|++++|.+++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 877776654 67888888877511 01111222222 78999999999998888
Q ss_pred cccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCC-CCCCC
Q 002186 311 ESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPD-ICSGG 389 (955)
Q Consensus 311 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~-~~~~~ 389 (955)
..|+.+++|+.|++++|+++ .+|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+.+.+|.. +..+.
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 88999999999999999998 68888999999999999999999888889999999999999999999888775 67788
Q ss_pred ccceeeccCCCCCCCC--CcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcc-hhhccCCccc
Q 002186 390 VLFKLILFSNNFTGSL--SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTD-INQASKLEYF 466 (955)
Q Consensus 390 ~l~~l~l~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~-~~~~~~L~~L 466 (955)
+|+.|++++|.+.+.. +..+..+++|++|++++|++++..|..|..+++|++|++++|++.+..|.. +..+++|++|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 9999999999998876 778899999999999999999988999999999999999999999877654 8889999999
Q ss_pred ccCCCCCCCCCCCcccCCCCccccccCcccccCCC-CC---CCCcCCccceEeccccccccccCCCCCcccccceeeecc
Q 002186 467 NVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LP---PFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLAN 542 (955)
Q Consensus 467 ~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~-~p---~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~ 542 (955)
++++| .+.+..|..+..+++|+.|++++|.+++. +| .+..+++|+.|++++|++++..|..+.++++|+.|+|++
T Consensus 431 ~l~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 509 (606)
T 3t6q_A 431 NLSHS-LLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSH 509 (606)
T ss_dssp ECTTC-CCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCC-ccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCC
Confidence 99999 77778888888999999999999998873 22 257789999999999999998899999999999999999
Q ss_pred ccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccccc
Q 002186 543 NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRL 605 (955)
Q Consensus 543 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~ 605 (955)
|++++..|..+.+++.| .|+|++|++++.+|..|..+++|++|++++|++++.++......+
T Consensus 510 N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~w 571 (606)
T 3t6q_A 510 NRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCSNIYFLEW 571 (606)
T ss_dssp SCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGGGHHHHHH
T ss_pred CccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCCcHHHHHH
Confidence 99999999999999999 999999999999998899999999999999999988875544433
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3e-55 Score=536.41 Aligned_cols=528 Identities=20% Similarity=0.223 Sum_probs=469.3
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.++.++++++.+.+..|..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|+.+++|++||
T Consensus 50 ~L~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 127 (680)
T 1ziw_A 50 QLTSLDVGFNTISKLEPELCQK--LPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLD 127 (680)
T ss_dssp TCSEEECCSSCCCCCCTTHHHH--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEE
T ss_pred cCcEEECCCCccCccCHHHHhc--ccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEE
Confidence 5778899999999887777777 89999999999999977667899999999999999999988888999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcC--CCCCCcEEEccCCCCCCCCchhccCC-------------
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG--SFKSLEFLHLAGNLLNDQIPAELGML------------- 220 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~--~l~~L~~L~L~~N~l~~~~p~~l~~l------------- 220 (955)
|++|.+++..|..++++++|++|+|++|.+++..|..++ .+++|++|++++|.+++..|..+..+
T Consensus 128 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l 207 (680)
T 1ziw_A 128 LSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQL 207 (680)
T ss_dssp CCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCC
T ss_pred CCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhcccccc
Confidence 999999999999999999999999999999987777654 56899999999999999888877654
Q ss_pred --------------CCCcEEecccccccCCCCccccCCCC--CcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 221 --------------KTVTHMEIGYNFYQGNIPWQLGNMSE--VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 221 --------------~~L~~L~l~~n~l~g~~p~~~~~l~~--L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
++|+.|++++|.+.+..|..+.+++. |++|++++|.+++..|..++.+++|++|++++|++.+.
T Consensus 208 ~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 287 (680)
T 1ziw_A 208 GPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHL 287 (680)
T ss_dssp HHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEE
T ss_pred ChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCcc
Confidence 56778888888888888888888765 99999999999998899999999999999999999999
Q ss_pred CCccCcCCCccCEEEccCCCCCC-----CCCc----ccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSG-----PIPE----SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~-----~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
.|..|..+++|+.|++++|...+ .+|. .|..+++|+.|++++|++++..|..+..+++|++|++++|.+.+
T Consensus 288 ~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~ 367 (680)
T 1ziw_A 288 FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL 367 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCC
T ss_pred ChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhh
Confidence 99999999999999999887654 2343 78899999999999999999999999999999999999998653
Q ss_pred c-C-CcccCC--CCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCC-cCccCCCCCcEEECcCCccccccc
Q 002186 356 S-L-PENLGR--NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS-PSLSNCSSLVRLRLEDNSFSGEIP 430 (955)
Q Consensus 356 ~-~-p~~~~~--~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p 430 (955)
. + +..+.. .++|+.|++++|++++..|..+..+.+|+.|++++|.+.+.+| ..+.++++|++|++++|++.+..+
T Consensus 368 ~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 447 (680)
T 1ziw_A 368 RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTR 447 (680)
T ss_dssp CEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCT
T ss_pred hhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeCh
Confidence 2 2 222332 3589999999999999889899999999999999999998776 678999999999999999999999
Q ss_pred hhccCCCCCCEEECCCCcCC--CCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCC----C--
Q 002186 431 LKFSQLPDINYIDLSRNGFT--GGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN----L-- 502 (955)
Q Consensus 431 ~~~~~l~~L~~L~Ls~N~l~--~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~----~-- 502 (955)
..|..+++|+.|++++|.+. +.+|..+..+++|++|++++| .+.+..|..+..+++|+.|++++|.+++. +
T Consensus 448 ~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N-~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 526 (680)
T 1ziw_A 448 NSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNN-NIANINDDMLEGLEKLEILDLQHNNLARLWKHANPG 526 (680)
T ss_dssp TTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSS-CCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTT
T ss_pred hhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCC-CCCcCChhhhccccccCEEeCCCCCccccchhhccC
Confidence 99999999999999999987 678999999999999999999 77777777788999999999999998753 1
Q ss_pred ---CCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcC-
Q 002186 503 ---PPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFG- 578 (955)
Q Consensus 503 ---p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~- 578 (955)
..+..+++|+.|++++|+++...+..|.++++|+.|||++|++++..+..|..+++|+.|+|++|++++..|..|.
T Consensus 527 ~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 606 (680)
T 1ziw_A 527 GPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGP 606 (680)
T ss_dssp SCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHH
T ss_pred CcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcc
Confidence 2368899999999999999965556799999999999999999988888899999999999999999999988887
Q ss_pred CCCCCcEEECCCCcceeccCC-ccccccc
Q 002186 579 SCSSLTVLNVSFNDISGSIPS-GKVLRLM 606 (955)
Q Consensus 579 ~l~~L~~L~ls~N~l~g~ip~-~~~~~~~ 606 (955)
.+++|+.|++++|++.+.++. .+...+.
T Consensus 607 ~~~~L~~l~l~~N~~~c~c~~~~~~~~~~ 635 (680)
T 1ziw_A 607 AFRNLTELDMRFNPFDCTCESIAWFVNWI 635 (680)
T ss_dssp HHTTCSEEECTTCCCCBCCCCCSSEECCS
T ss_pred cccccCEEEccCCCcccCCccHHHHHHHH
Confidence 789999999999999999885 4444444
No 6
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.6e-57 Score=548.85 Aligned_cols=426 Identities=22% Similarity=0.295 Sum_probs=322.2
Q ss_pred CChhhHHHHHHhhhhCCCCC--------CCCCCCCCCCCCCCCCCCCCccc---cceeecCCCCcEEEEEcCCCCCCccC
Q 002186 23 ANDPYSEALLSLKSELVDDF--------NSLHDWFVPPGVNPAGKIYACSW---SGVKCNKNNTIVVGINLSMKGLSGAL 91 (955)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~--------~~l~~w~~~~~~~~~~~~~~c~w---~gv~C~~~~~~v~~l~l~~~~l~g~~ 91 (955)
+...|++||.++|+++.++. ....+|..+ .+||.| .||+|+. .++|+.++|+++++.|.+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~--------~~~c~w~~~~GV~C~~-~~~V~~L~L~~~~l~g~l 97 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN--------KELDMWGAQPGVSLNS-NGRVTGLSLEGFGASGRV 97 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS--------SCGGGTTCCTTEEECT-TCCEEEEECTTSCCEEEE
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC--------CCcccccCCCCeEEcC-CCCEEEEEecCcccCCcC
Confidence 34568999999999986541 123467543 679999 9999987 489999999999999999
Q ss_pred CCCcchhcCCCCcEEECCCCcC------cc------cCCccccCCCCCCEEEccCCcCCccCCccccCC-----------
Q 002186 92 PGKPLRIFFNELVDLNLSHNSF------SG------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSL----------- 148 (955)
Q Consensus 92 ~~~~~~~~l~~L~~L~Ls~n~l------~~------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l----------- 148 (955)
|+.+.. +++|++|||++|.+ .| .+|... +.+|+ +++++|.+.+.+|..+..+
T Consensus 98 p~~l~~--L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~ 172 (636)
T 4eco_A 98 PDAIGQ--LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQ 172 (636)
T ss_dssp CGGGGG--CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTS
T ss_pred ChHHhc--CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccc
Confidence 999888 99999999999977 33 445444 56677 8888888888777666521
Q ss_pred --------CCCcEEeC--CCCCCCCCCchhhcCCCcceEEEecCCCCccc-----------------CCCCcC--CCCCC
Q 002186 149 --------RNLLVLDA--FSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP-----------------IPSQFG--SFKSL 199 (955)
Q Consensus 149 --------~~L~~LdL--~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~-----------------~p~~~~--~l~~L 199 (955)
..++.+.+ ..|+++| +|..++++++|++|+|++|.+++. +|..++ ++++|
T Consensus 173 ~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L 251 (636)
T 4eco_A 173 KSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDL 251 (636)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTC
T ss_pred cccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCC
Confidence 12222222 2678888 888899999999999999999886 888888 99999
Q ss_pred cEEEccCCCCCCCCchhccCCCCCcEEeccccc-ccC-CCCccccCC------CCCcEEeccCCCCCCCCCc--cccCCC
Q 002186 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-YQG-NIPWQLGNM------SEVQYLDIAGANLSGSIPK--ELSNLT 269 (955)
Q Consensus 200 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-l~g-~~p~~~~~l------~~L~~L~Ls~n~l~~~~p~--~l~~l~ 269 (955)
++|+|++|.+.+.+|..++++++|++|++++|. ++| .+|..++++ ++|++|++++|+++ .+|. .+++++
T Consensus 252 ~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~ 330 (636)
T 4eco_A 252 TDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMK 330 (636)
T ss_dssp CEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCT
T ss_pred CEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCC
Confidence 999999999989999999999999999999997 888 888888876 88999999999998 7887 888899
Q ss_pred CCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCC-CcEEecccccCCCCCccccCCCC--CccEE
Q 002186 270 KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN-LRLLSLMYNEMSGTVPESLVQLP--SLEIL 346 (955)
Q Consensus 270 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~--~L~~L 346 (955)
+|++|++++|+++|.+| .|..+++|++|++++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..++ +|+.|
T Consensus 331 ~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L 407 (636)
T 4eco_A 331 KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAI 407 (636)
T ss_dssp TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEE
T ss_pred CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEE
Confidence 99999999999988888 8888889999999999888 67888888888 999999999888 6787776654 88888
Q ss_pred EccCCcCcccCCcccC-------CCCCCCeeecCCCcccccCCCCCCC-CCccceeeccCCCCCCCCCcC-ccC------
Q 002186 347 FIWNNYFSGSLPENLG-------RNSKLRWVDVSTNNFNGSIPPDICS-GGVLFKLILFSNNFTGSLSPS-LSN------ 411 (955)
Q Consensus 347 ~L~~N~l~~~~p~~~~-------~~~~L~~L~ls~N~l~g~ip~~~~~-~~~l~~l~l~~n~l~~~~p~~-~~~------ 411 (955)
++++|.+++.+|..+. .+.+|+.|++++|.++ .+|..++. +..|+.|++++|.++ .+|.. +..
T Consensus 408 ~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~ 485 (636)
T 4eco_A 408 DFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFK 485 (636)
T ss_dssp ECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECT
T ss_pred ECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhcccccccc
Confidence 8888888888888777 6667777777777776 55554432 455555566555555 33332 221
Q ss_pred -CCCCcEEECcCCccccccchhcc--CCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 412 -CSSLVRLRLEDNSFSGEIPLKFS--QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 412 -l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|++|++++|
T Consensus 486 ~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 486 NTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp TGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred ccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 125666666666665 4555554 56666666666666665 5555555555555555555
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-56 Score=548.10 Aligned_cols=507 Identities=21% Similarity=0.277 Sum_probs=318.5
Q ss_pred CChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCccc------------cceeecCCCCcEEEEEcCCCCCCcc
Q 002186 23 ANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSW------------SGVKCNKNNTIVVGINLSMKGLSGA 90 (955)
Q Consensus 23 ~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w------------~gv~C~~~~~~v~~l~l~~~~l~g~ 90 (955)
+..+|++||++||+++.+| +|..+.+. +....++|+| .||+|+. .++|+.++|+++++.|.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~-~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGT-INNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSS-CSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCc-ccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCc
Confidence 3457899999999999876 89765211 1112234999 9999997 78999999999999999
Q ss_pred CCCCcchhcCCCCcEEEC-CCCcCcccCCccccCCC-CCCE--------------EE-ccCCcCCcc-----------CC
Q 002186 91 LPGKPLRIFFNELVDLNL-SHNSFSGQFPVEIFNLT-SLIS--------------LD-ISRNNFSGH-----------FP 142 (955)
Q Consensus 91 ~~~~~~~~~l~~L~~L~L-s~n~l~~~~p~~~~~l~-~L~~--------------L~-Ls~N~l~~~-----------~p 142 (955)
+|+.+.. +++|+.||| ++|.++|..|....... .+.. ++ .....+++. .+
T Consensus 339 ip~~l~~--L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~ 416 (876)
T 4ecn_A 339 VPDAIGQ--LTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKP 416 (876)
T ss_dssp ECGGGGG--CTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCC
T ss_pred CchHHhc--cccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccc
Confidence 9999888 899999999 89988887553311110 0000 00 000000000 01
Q ss_pred ccccCCCCCcEEeCCC--CCCCCCCchhhcCCCcceEEEecCCCCcc-----------------cCCCCcC--CCCCCcE
Q 002186 143 GGIQSLRNLLVLDAFS--NSFSGSVPAEISQLEHLKVLNLAGSYFSG-----------------PIPSQFG--SFKSLEF 201 (955)
Q Consensus 143 ~~~~~l~~L~~LdL~~--N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-----------------~~p~~~~--~l~~L~~ 201 (955)
........++.+.+.. |.+++ +|..++++++|++|+|++|.+++ .+|..++ ++++|++
T Consensus 417 i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~ 495 (876)
T 4ecn_A 417 IKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTD 495 (876)
T ss_dssp CCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCE
T ss_pred cccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCE
Confidence 0111122233333322 55555 56666666666666666666665 2666655 6666666
Q ss_pred EEccCCCCCCCCchhccCCCCCcEEeccccc-ccC-CCCccccCCC-------CCcEEeccCCCCCCCCCc--cccCCCC
Q 002186 202 LHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-YQG-NIPWQLGNMS-------EVQYLDIAGANLSGSIPK--ELSNLTK 270 (955)
Q Consensus 202 L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-l~g-~~p~~~~~l~-------~L~~L~Ls~n~l~~~~p~--~l~~l~~ 270 (955)
|+|++|.+.+.+|..++++++|+.|++++|. ++| .+|..+++++ +|++|++++|.++ .+|. .++++++
T Consensus 496 L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~ 574 (876)
T 4ecn_A 496 VELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVK 574 (876)
T ss_dssp EEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTT
T ss_pred EECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCC
Confidence 6666666666666666666666666666665 665 5665555443 6666666666666 5665 6666666
Q ss_pred CCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCC-CcEEecccccCCCCCccccCCCCC--ccEEE
Q 002186 271 LESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKN-LRLLSLMYNEMSGTVPESLVQLPS--LEILF 347 (955)
Q Consensus 271 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~l~~l~~--L~~L~ 347 (955)
|++|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|+++ .+|..+..++. |+.|+
T Consensus 575 L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~ 650 (876)
T 4ecn_A 575 LGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVD 650 (876)
T ss_dssp CCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEE
T ss_pred CCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEE
Confidence 666666666666 555 6666666666666666666 56666666666 666666666666 55665555433 66666
Q ss_pred ccCCcCcccCCccc---C--CCCCCCeeecCCCcccccCCCCCC-CCCccceeeccCCCCCCCCCcCc--------cCCC
Q 002186 348 IWNNYFSGSLPENL---G--RNSKLRWVDVSTNNFNGSIPPDIC-SGGVLFKLILFSNNFTGSLSPSL--------SNCS 413 (955)
Q Consensus 348 L~~N~l~~~~p~~~---~--~~~~L~~L~ls~N~l~g~ip~~~~-~~~~l~~l~l~~n~l~~~~p~~~--------~~l~ 413 (955)
+++|.+++.+|... + .+.+|+.|++++|.++ .+|..++ .+..|+.|++++|++. .+|..+ .+|+
T Consensus 651 Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~ 728 (876)
T 4ecn_A 651 FSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTY 728 (876)
T ss_dssp CCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGG
T ss_pred CcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccC
Confidence 66666666554322 2 2235666666666666 4554443 3445555555555555 333322 2334
Q ss_pred CCcEEECcCCccccccchhcc--CCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccc
Q 002186 414 SLVRLRLEDNSFSGEIPLKFS--QLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNF 491 (955)
Q Consensus 414 ~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l 491 (955)
+|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++|+
T Consensus 729 ~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~------------------- 787 (876)
T 4ecn_A 729 LLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR------------------- 787 (876)
T ss_dssp GCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-------------------
T ss_pred CccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-------------------
Confidence 7888888888887 6677776 78888888888888876 67777777777777777772
Q ss_pred cCcccccCCCCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCcc
Q 002186 492 SASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSG 571 (955)
Q Consensus 492 ~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 571 (955)
+++.|++.+.+|..+.++++|+.|+|++|++ +.+|..+. ++|+.|||++|++..
T Consensus 788 -----------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 788 -----------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp -----------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred -----------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 2345566666777777777777777777777 66776654 577777777777766
Q ss_pred ccCCCcCCCCCCcEEECCCCcc
Q 002186 572 QIPAKFGSCSSLTVLNVSFNDI 593 (955)
Q Consensus 572 ~~p~~~~~l~~L~~L~ls~N~l 593 (955)
..+..+.....+..+.+++|++
T Consensus 842 i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 842 IDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp EECGGGHHHHHTTCCEEECCTT
T ss_pred cChHHccccccchheeecCCCc
Confidence 6665555444445555555544
No 8
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8e-55 Score=543.11 Aligned_cols=519 Identities=21% Similarity=0.223 Sum_probs=307.3
Q ss_pred cccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccC-CccccCCCCCCEEEccCCcCCccCC
Q 002186 64 SWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQF-PVEIFNLTSLISLDISRNNFSGHFP 142 (955)
Q Consensus 64 ~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p 142 (955)
.|..|-+ ....++.++|+.+.+++..+..+.. +++|++|||++|.+.+.+ |.+|.++++|++|+|++|.+++..|
T Consensus 15 ~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~--l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p 90 (844)
T 3j0a_A 15 NLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPF--LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP 90 (844)
T ss_dssp CSSCCCS--SCTTCCEEEEESCCCCEECSSSCSS--CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT
T ss_pred CCCCCCC--CCCCcCEEECCCCcCCccChhHCcc--cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH
Confidence 4444444 1234455555555555544444444 555555555555443333 4455555555555555555555555
Q ss_pred ccccCCCCCcEEeCCCCCCCCCCchh--hcCCCcceEEEecCCCCcccCC-CCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 143 GGIQSLRNLLVLDAFSNSFSGSVPAE--ISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 143 ~~~~~l~~L~~LdL~~N~l~~~~p~~--~~~L~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..|+++++|++|||++|.+++.+|.. +.++++|++|+|++|.+++..| ..|+++++|++|+|++|.+++..|..+..
T Consensus 91 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~ 170 (844)
T 3j0a_A 91 DAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEP 170 (844)
T ss_dssp TSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHH
T ss_pred hHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHccc
Confidence 55555555555555555555544443 5555555555555555554433 34555555555555555555555555554
Q ss_pred C--CCCcEEecccccccCCCCccccCCCC------CcEEeccCCCCCCCCCccccCC---CCCCEEEeccc---------
Q 002186 220 L--KTVTHMEIGYNFYQGNIPWQLGNMSE------VQYLDIAGANLSGSIPKELSNL---TKLESLFLFRN--------- 279 (955)
Q Consensus 220 l--~~L~~L~l~~n~l~g~~p~~~~~l~~------L~~L~Ls~n~l~~~~p~~l~~l---~~L~~L~L~~N--------- 279 (955)
+ ++|+.|+++.|.+.+..|..++++.+ |++|++++|.+++.+|..+... ++++.|.++.+
T Consensus 171 l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 171 LQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred ccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 4 55555555555555555544444433 5555555555555555444322 34444544422
Q ss_pred cccccCCccCcCC--CccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccC
Q 002186 280 QLAGQVPWEFSRV--TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSL 357 (955)
Q Consensus 280 ~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 357 (955)
.+.+..+..|..+ ++|+.|++++|.+.+..|..|..+++|+.|++++|++++..|..+..+++|++|++++|.+++..
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 330 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELY 330 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCC
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccC
Confidence 1222222223332 56777777777777666677777777777777777777666667777777777777777777666
Q ss_pred CcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCC
Q 002186 358 PENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437 (955)
Q Consensus 358 p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 437 (955)
|..+..+++|+.|++++|.+.+..+..+..+.+|+.|++++|.+++. ..+++|+.|++++|+++ .+|.. ..
T Consensus 331 ~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~ 401 (844)
T 3j0a_A 331 SSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NL 401 (844)
T ss_dssp SCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CT
T ss_pred HHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cc
Confidence 67777777777777777777655555566666777777777776642 22566777777777776 33432 34
Q ss_pred CCCEEECCCCcCCCCCC-cchhhccCCcccccCCCCCCCCCCCc-ccCCCCccccccCcccccCCCC-----C-CCCcCC
Q 002186 438 DINYIDLSRNGFTGGIP-TDINQASKLEYFNVSNNPKLGGMIPA-QTWSLPSLQNFSASACNITGNL-----P-PFKSCK 509 (955)
Q Consensus 438 ~L~~L~Ls~N~l~~~ip-~~~~~~~~L~~L~ls~N~~l~~~~p~-~~~~l~~L~~l~ls~n~l~~~~-----p-~~~~~~ 509 (955)
+++.|++++|++++.-. ..+..+++|++|++++| .+.+..+. ....+++|+.|++++|.+++.. | .+..++
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 480 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQN-RFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLS 480 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESC-CCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCC-cccccccccccccCCccccccCCCCccccccccccchhhhcCcc
Confidence 56777777777765322 22346677777777777 44433222 2334667777777777765322 1 245667
Q ss_pred ccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECC
Q 002186 510 SISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVS 589 (955)
Q Consensus 510 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 589 (955)
+|+.|++++|++++.+|..+.++++|+.|+|++|++++..|..+. ++|+.|||++|++++.+|..|. +|+.|+++
T Consensus 481 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~---~L~~l~l~ 555 (844)
T 3j0a_A 481 HLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFV---SLSVLDIT 555 (844)
T ss_dssp CEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCS---SCCEEEEE
T ss_pred cccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhC---CcCEEEec
Confidence 777777777777777777777777777777777777766665554 6777777777777777776653 56777777
Q ss_pred CCcceeccCCcc
Q 002186 590 FNDISGSIPSGK 601 (955)
Q Consensus 590 ~N~l~g~ip~~~ 601 (955)
+|++.+.++...
T Consensus 556 ~Np~~C~c~~~~ 567 (844)
T 3j0a_A 556 HNKFICECELST 567 (844)
T ss_dssp EECCCCSSSCCS
T ss_pred CCCcccccccHH
Confidence 777777666443
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.5e-54 Score=519.79 Aligned_cols=500 Identities=19% Similarity=0.166 Sum_probs=445.6
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
.+|..+. .++++|||++|.+++..|..|+.+++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|++
T Consensus 26 ~iP~~l~--~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 103 (606)
T 3t6q_A 26 EIPGTLP--NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSG 103 (606)
T ss_dssp SCCTTSC--TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSS
T ss_pred cCcCCCC--CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcc
Confidence 4555554 37899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCC--E
Q 002186 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE--S 273 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~--~ 273 (955)
+++|++|+|++|.+++..|..++.+++|++|++++|.+.+..+..+..+++|++|++++|.+++..|..++.+++|+ +
T Consensus 104 l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~ 183 (606)
T 3t6q_A 104 PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLS 183 (606)
T ss_dssp CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEE
T ss_pred cccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeE
Confidence 99999999999999988788999999999999999999984433444599999999999999988889999999999 8
Q ss_pred EEeccccccccCCccCcCCCccCEEEccCCCC--------------------------CCCCCcccCCCC--CCcEEecc
Q 002186 274 LFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRL--------------------------SGPIPESFADLK--NLRLLSLM 325 (955)
Q Consensus 274 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l--------------------------~~~~p~~~~~l~--~L~~L~Ls 325 (955)
|++++|.+++..|..|.. .+|+.|++++|.. ....+..|..+. +|+.|+++
T Consensus 184 L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~ 262 (606)
T 3t6q_A 184 LNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQ 262 (606)
T ss_dssp EECTTCCCCEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECT
T ss_pred EecCCCccCccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEee
Confidence 999999999988877655 6899999988751 011223333333 78999999
Q ss_pred cccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCC
Q 002186 326 YNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 405 (955)
Q Consensus 326 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~ 405 (955)
+|.+++..+..+..+++|++|++++|.++ .+|..+..+++|++|++++|.+.+..|..+...++|+.|++++|.+.+.+
T Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 341 (606)
T 3t6q_A 263 KHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLEL 341 (606)
T ss_dssp TCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBC
T ss_pred cCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccccc
Confidence 99999988888999999999999999998 78889999999999999999999888888899999999999999999888
Q ss_pred CcC-ccCCCCCcEEECcCCcccccc--chhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCc-c
Q 002186 406 SPS-LSNCSSLVRLRLEDNSFSGEI--PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPA-Q 481 (955)
Q Consensus 406 p~~-~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~-~ 481 (955)
|.. +..+++|++|++++|++++.. |..+..+++|++|++++|++.+..|..+..+++|++|++++| .+.+..|. .
T Consensus 342 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~~ 420 (606)
T 3t6q_A 342 GTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFT-RLKVKDAQSP 420 (606)
T ss_dssp CSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTC-CEECCTTCCT
T ss_pred chhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCC-cCCCcccchh
Confidence 765 899999999999999999876 788999999999999999999999999999999999999999 56665554 4
Q ss_pred cCCCCccccccCcccccCCCCCC-CCcCCccceEeccccccccc---cCCCCCcccccceeeeccccccccchhhhcCCC
Q 002186 482 TWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGT---IPESVSNCVELERIDLANNKLIGSIPEVLARLP 557 (955)
Q Consensus 482 ~~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 557 (955)
+..+++|+.|++++|.+++..|. +..+++|+.|++++|.+++. .+..+..+++|+.|+|++|++++..|..++.++
T Consensus 421 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 500 (606)
T 3t6q_A 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLK 500 (606)
T ss_dssp TTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred hhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhcccc
Confidence 78899999999999999988776 48899999999999999873 336789999999999999999999999999999
Q ss_pred CCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-ccccccCCCccCCCCCCCCCC
Q 002186 558 VLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNPKLCGAP 621 (955)
Q Consensus 558 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~~ 621 (955)
+|+.|+|++|++++.+|..|..+++| +|++++|++++..|.. ..+..+....+.+||..|.++
T Consensus 501 ~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 501 MMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp TCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred CCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999999999999999999999 9999999999876654 445666777899999999754
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.1e-54 Score=524.29 Aligned_cols=493 Identities=20% Similarity=0.182 Sum_probs=346.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.+++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|+++++|++|||++|.+++..|..|+++++|++|+|
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57899999999999888888999999999999999999888888999999999999999999888889999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCCc----EEeccCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ----YLDIAGA 255 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~----~L~Ls~n 255 (955)
++|.+++..|..|+++++|++|++++|.+++ .+|..++++++|++|++++|.+.+..|..++.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999988777889999999999999999876 6789999999999999999999888787777766654 8999999
Q ss_pred CCCCCCCccccCCCCCCEEEecccccc-ccCCccCcCCCccCEEEc---------------------------------c
Q 002186 256 NLSGSIPKELSNLTKLESLFLFRNQLA-GQVPWEFSRVTTLKSLDL---------------------------------S 301 (955)
Q Consensus 256 ~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L---------------------------------s 301 (955)
.+++..+..+... +|++|++++|.++ +..|..+.++++|+.+++ .
T Consensus 192 ~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred CcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 9886655555544 8999999999876 344555666666666555 4
Q ss_pred CCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccC
Q 002186 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI 381 (955)
Q Consensus 302 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~i 381 (955)
.|.+++.+|. +..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+ +.+|. + .+++|+.|++++|...+.+
T Consensus 271 ~~~~~~~~~~-~~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~lp~-~-~l~~L~~L~l~~n~~~~~~ 344 (606)
T 3vq2_A 271 TNDFSDDIVK-FHCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQFPT-L-DLPFLKSLTLTMNKGSISF 344 (606)
T ss_dssp CTTCCGGGGS-CGGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SSCCC-C-CCSSCCEEEEESCSSCEEC
T ss_pred cccccccccc-cccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-ccccc-C-CCCccceeeccCCcCccch
Confidence 4555555554 6666666666666666643 34 566666666666666666 45553 3 6666666666666544433
Q ss_pred CCCCCCCCccceeeccCCCCCCC--CCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCC-cchh
Q 002186 382 PPDICSGGVLFKLILFSNNFTGS--LSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TDIN 458 (955)
Q Consensus 382 p~~~~~~~~l~~l~l~~n~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip-~~~~ 458 (955)
.+..+++|+.|++++|.+++. +|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+.
T Consensus 345 --~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 421 (606)
T 3vq2_A 345 --KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFL 421 (606)
T ss_dssp --CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTT
T ss_pred --hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhh
Confidence 344555666666666666654 35556666666666666666654 44556666666666666666666555 4556
Q ss_pred hccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCC-CCC-CCcCCccceEeccccccccccCCCCCcccccc
Q 002186 459 QASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELE 536 (955)
Q Consensus 459 ~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~-~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~ 536 (955)
.+++|++|++++| .+.+..|..+..+++|+.|++++|.+++. +|. +..+++|+.|++++|++++..|..+.++++|+
T Consensus 422 ~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 500 (606)
T 3vq2_A 422 SLEKLLYLDISYT-NTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQ 500 (606)
T ss_dssp TCTTCCEEECTTS-CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccccCCEEECcCC-CCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCC
Confidence 6666666666666 45555566666666666666666666652 333 35566666666666666666666666666666
Q ss_pred eeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCC-CCcEEECCCCcceeccCCcccccc
Q 002186 537 RIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCS-SLTVLNVSFNDISGSIPSGKVLRL 605 (955)
Q Consensus 537 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~ls~N~l~g~ip~~~~~~~ 605 (955)
+|+|++|++++.+|..++.+++|++|||++|+++ .+|..+..++ +|++|++++|++.+.++..+..++
T Consensus 501 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~ 569 (606)
T 3vq2_A 501 LLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQKFLQW 569 (606)
T ss_dssp EEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTHHHHTT
T ss_pred EEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCccHHHHHH
Confidence 6666666666666666666666666666666666 3444455554 466666666666666555443333
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=6.1e-54 Score=517.71 Aligned_cols=503 Identities=20% Similarity=0.200 Sum_probs=444.5
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|||++|.+++..|..|.++++|++|+|++|.
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 3555666665 4565554 899999999999999999999999999999999999999889999999999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC-CCCccccCCCCCcEEeccCCCCCCCCCc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g-~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 263 (955)
+++..|..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+ .+|..++++++|++|++++|.+++..|.
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~ 171 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVN 171 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChh
Confidence 999889999999999999999999998888899999999999999999986 6899999999999999999999998888
Q ss_pred cccCCCCCC----EEEeccccccccCCccCcCCCccCEEEccCCCCC-CCCCcccCCCCCCcEEec--------------
Q 002186 264 ELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLS-GPIPESFADLKNLRLLSL-------------- 324 (955)
Q Consensus 264 ~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L-------------- 324 (955)
.++.+++|+ +|++++|.+++..+..+... +|+.|++++|.++ +.+|..+..+++|+.+++
T Consensus 172 ~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~ 250 (606)
T 3vq2_A 172 DLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIF 250 (606)
T ss_dssp TTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCC
T ss_pred hhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCccccc
Confidence 887776655 89999999998877777665 8999999999987 345666777777777665
Q ss_pred -------------------ccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCC
Q 002186 325 -------------------MYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDI 385 (955)
Q Consensus 325 -------------------s~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~ 385 (955)
..|.+.+.+|. +..+++|+.|++++|.+. .+| .+..+++|+.|++++|.+ +.+| .+
T Consensus 251 ~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~ 325 (606)
T 3vq2_A 251 EPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL 325 (606)
T ss_dssp CGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC
T ss_pred ChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC
Confidence 55666766776 888999999999999996 466 888999999999999999 7899 45
Q ss_pred CCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccc--cchhccCCCCCCEEECCCCcCCCCCCcchhhccCC
Q 002186 386 CSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE--IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKL 463 (955)
Q Consensus 386 ~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L 463 (955)
.+..|+.|++++|...+.+ .+..+++|++|++++|++++. +|..+..+++|++|++++|.+++ +|..+..+++|
T Consensus 326 -~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L 401 (606)
T 3vq2_A 326 -DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEEL 401 (606)
T ss_dssp -CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTC
T ss_pred -CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCC
Confidence 8899999999999766554 577899999999999999977 48889999999999999999985 67889999999
Q ss_pred cccccCCCCCCCCCCC-cccCCCCccccccCcccccCCCCCC-CCcCCccceEecccccccc-ccCCCCCcccccceeee
Q 002186 464 EYFNVSNNPKLGGMIP-AQTWSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSG-TIPESVSNCVELERIDL 540 (955)
Q Consensus 464 ~~L~ls~N~~l~~~~p-~~~~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g-~~p~~~~~l~~L~~L~L 540 (955)
++|++++| .+.+..| ..+..+++|+.|++++|.+++..|. +..+++|+.|++++|.+++ .+|..+.++++|+.|+|
T Consensus 402 ~~L~l~~n-~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 480 (606)
T 3vq2_A 402 QHLDFQHS-TLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDL 480 (606)
T ss_dssp CEEECTTS-EEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CeeECCCC-ccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEEC
Confidence 99999999 6767766 6788999999999999999998776 4889999999999999998 47999999999999999
Q ss_pred ccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-cccc-ccCCCccCCCCCCC
Q 002186 541 ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLR-LMGSSAYAGNPKLC 618 (955)
Q Consensus 541 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~-~~~~~~~~~n~~lc 618 (955)
++|++++.+|..++.+++|++|+|++|++++.+|..|..+++|++|++++|+++ .+|.. ..+. .+....+.+||..|
T Consensus 481 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 481 SKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCC
T ss_pred CCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCccc
Confidence 999999999999999999999999999999999999999999999999999999 56765 2222 24556789999999
Q ss_pred CCCC
Q 002186 619 GAPL 622 (955)
Q Consensus 619 g~~l 622 (955)
++++
T Consensus 560 ~c~~ 563 (606)
T 3vq2_A 560 ICEH 563 (606)
T ss_dssp SSTT
T ss_pred CCcc
Confidence 8764
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-53 Score=529.78 Aligned_cols=509 Identities=20% Similarity=0.183 Sum_probs=450.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC-CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.++|++|||++|.+++..|.+|.++++|++|||++|.+.+.+ |..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 23 p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 102 (844)
T 3j0a_A 23 LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFEL 102 (844)
T ss_dssp CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCE
T ss_pred CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEe
Confidence 468999999999999999999999999999999999776666 7889999999999999999999999999999999999
Q ss_pred EecCCCCcccCCCC--cCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCC--CCCcEEecc
Q 002186 179 NLAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNM--SEVQYLDIA 253 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l--~~L~~L~Ls 253 (955)
+|++|.+++.+|.. |+++++|++|+|++|.+++..| ..++++++|++|++++|.+.+..|..+..+ ++|+.|+++
T Consensus 103 ~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~ 182 (844)
T 3j0a_A 103 RLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLA 182 (844)
T ss_dssp ECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEEC
T ss_pred eCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECC
Confidence 99999999877765 9999999999999999988765 689999999999999999999999999888 899999999
Q ss_pred CCCCCCCCCccccCCCC------CCEEEeccccccccCCccCcCC---CccCEEEccC---------CCCCCCCCcccCC
Q 002186 254 GANLSGSIPKELSNLTK------LESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSD---------NRLSGPIPESFAD 315 (955)
Q Consensus 254 ~n~l~~~~p~~l~~l~~------L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~---------N~l~~~~p~~~~~ 315 (955)
+|.+.+..|..++.+++ |++|++++|.+++..+..+... +.++.|.++. |.+.+..+..|..
T Consensus 183 ~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~ 262 (844)
T 3j0a_A 183 ANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAG 262 (844)
T ss_dssp CSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTT
T ss_pred CCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhc
Confidence 99999999888877766 9999999999998888776543 5788888873 3444444555665
Q ss_pred C--CCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccce
Q 002186 316 L--KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFK 393 (955)
Q Consensus 316 l--~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~ 393 (955)
+ ++|+.|++++|.+.+..|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+++..|..+..+.+|+.
T Consensus 263 l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 263 LARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp TTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred cccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 5 78999999999999988999999999999999999999999999999999999999999999888889999999999
Q ss_pred eeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCC
Q 002186 394 LILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPK 473 (955)
Q Consensus 394 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~ 473 (955)
|++++|.+.+..+..|.++++|++|+|++|.+++. ..+++|+.|++++|+++ .+|.. ..++++|++++| .
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N-~ 412 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSEN-R 412 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSC-C
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---ccccceeecccC-c
Confidence 99999999998888999999999999999999853 33889999999999998 55654 467999999999 5
Q ss_pred CCCC-CCcccCCCCccccccCcccccCCCCCC--CCcCCccceEeccccccc-----cccCCCCCcccccceeeeccccc
Q 002186 474 LGGM-IPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLS-----GTIPESVSNCVELERIDLANNKL 545 (955)
Q Consensus 474 l~~~-~p~~~~~l~~L~~l~ls~n~l~~~~p~--~~~~~~l~~l~l~~N~l~-----g~~p~~~~~l~~L~~L~Ls~N~l 545 (955)
+.+. .+..+..+++|+.|++++|++++..+. +..+++|+.|++++|.++ +..|..+.++++|+.|+|++|++
T Consensus 413 l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 492 (844)
T 3j0a_A 413 LENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492 (844)
T ss_dssp CCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHH
T ss_pred cccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcc
Confidence 5443 334456899999999999999976554 356889999999999997 45567789999999999999999
Q ss_pred cccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccccccCCCccCCCCCCCCCCC
Q 002186 546 IGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL 622 (955)
Q Consensus 546 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l 622 (955)
++.+|..|..+++|+.|+|++|+|++..|..+. ++|++||+++|++++.+|.. +..+....+.+||..|++++
T Consensus 493 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp TTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSC
T ss_pred cccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCccccccc
Confidence 999999999999999999999999998888877 89999999999999988854 55666778899999997764
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.2e-50 Score=479.91 Aligned_cols=510 Identities=20% Similarity=0.199 Sum_probs=428.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|||++|.+++..+.+|.++++|++|||++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46899999999999999999999999999999999999988899999999999999999999888899999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC----cEEeccCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV----QYLDIAGA 255 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L----~~L~Ls~n 255 (955)
++|.+++..+..|+++++|++|++++|.+++ .+|..++++++|++|++++|.+.+..|..++++++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 9999997766689999999999999999987 579999999999999999999998888888888888 89999999
Q ss_pred CCCCCCCccccCCCCCCEEEeccccccc-cCCccCcCCCccCEEEccCCCC------CCCCCcccCCCCC--CcEEeccc
Q 002186 256 NLSGSIPKELSNLTKLESLFLFRNQLAG-QVPWEFSRVTTLKSLDLSDNRL------SGPIPESFADLKN--LRLLSLMY 326 (955)
Q Consensus 256 ~l~~~~p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l------~~~~p~~~~~l~~--L~~L~Ls~ 326 (955)
.+.+..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+ .......+..+.+ ++.+++++
T Consensus 188 ~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 188 PMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred CceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 9998888777765 79999999885432 2233455666666655442222 2222233444443 45677777
Q ss_pred c-cCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCC
Q 002186 327 N-EMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSL 405 (955)
Q Consensus 327 N-~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~ 405 (955)
+ .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. .....|+.+.+.+|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 7 677788888888899999999999887 578888888 8999999999887 6665 35678899999999888777
Q ss_pred CcCccCCCCCcEEECcCCcccccc--chhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCC-ccc
Q 002186 406 SPSLSNCSSLVRLRLEDNSFSGEI--PLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP-AQT 482 (955)
Q Consensus 406 p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p-~~~ 482 (955)
+. ..+++|++|++++|++++.. |..+..+++|++|++++|.+.+..+. +..+++|++|++++| .+.+..| ..+
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n-~l~~~~~~~~~ 417 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHS-NLKQMSEFSVF 417 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTS-EEESCTTSCTT
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCC-ccccccchhhh
Confidence 65 67899999999999998764 77888999999999999999865444 888999999999999 5555555 467
Q ss_pred CCCCccccccCcccccCCCCCC-CCcCCccceEeccccccc-cccCCCCCcccccceeeeccccccccchhhhcCCCCCc
Q 002186 483 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLS-GTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLG 560 (955)
Q Consensus 483 ~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 560 (955)
..+++|+.|++++|.+++..|. +..+++|+.|++++|.++ +.+|..+..+++|+.|+|++|++++..|..+..+++|+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 497 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQ 497 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCC
Confidence 7889999999999999887775 478999999999999998 68999999999999999999999999999999999999
Q ss_pred EEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCcccc-cccCC--CccCCCCCCCCCC
Q 002186 561 VLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVL-RLMGS--SAYAGNPKLCGAP 621 (955)
Q Consensus 561 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~-~~~~~--~~~~~n~~lcg~~ 621 (955)
+|+|++|++++..|..|..+++|++|++++|+++|.+|....+ .++.. ..+.+.+ .|..|
T Consensus 498 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~~ 560 (570)
T 2z63_A 498 VLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSGS 560 (570)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTTT
T ss_pred EEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCCC
Confidence 9999999999999999999999999999999999999987655 44432 2344454 66544
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.6e-50 Score=480.05 Aligned_cols=490 Identities=19% Similarity=0.180 Sum_probs=362.4
Q ss_pred CccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC
Q 002186 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF 141 (955)
Q Consensus 62 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (955)
.|.|.|+ |+..... ++ .+|+.+ .++|++|||++|.+++..|.+|.++++|++|+|++|++++..
T Consensus 3 ~C~~~~~-c~~~~~~----------l~-~ip~~~----~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~ 66 (549)
T 2z81_A 3 SCDASGV-CDGRSRS----------FT-SIPSGL----TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIE 66 (549)
T ss_dssp EECTTSE-EECTTSC----------CS-SCCSCC----CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEEC
T ss_pred cCCCCce-EECCCCc----------cc-cccccC----CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccC
Confidence 5999999 8763322 22 344433 368999999999999999999999999999999999999999
Q ss_pred CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCc-hhccC
Q 002186 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGM 219 (955)
Q Consensus 142 p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~ 219 (955)
|+.|+.+++|++|||++|.+++..|..|+++++|++|+|++|.+++ ..|..|+++++|++|++++|.+.+.+| ..+..
T Consensus 67 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~ 146 (549)
T 2z81_A 67 GDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAG 146 (549)
T ss_dssp TTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTT
T ss_pred hhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhc
Confidence 9999999999999999999998888889999999999999999987 467889999999999999998555555 67899
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc-ccCCCCCCEEEeccccccccC--C-ccCcCCCcc
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE-LSNLTKLESLFLFRNQLAGQV--P-WEFSRVTTL 295 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~-l~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L 295 (955)
+++|++|++++|.+.+.+|..++++++|++|+++.|.+.. +|.. +..+++|++|++++|++++.. | .....+++|
T Consensus 147 l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L 225 (549)
T 2z81_A 147 LTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPM 225 (549)
T ss_dssp CCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCC
T ss_pred ccccCeeeccCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcc
Confidence 9999999999999998889999999999999999888763 4443 456888999999998888742 1 123456778
Q ss_pred CEEEccCCCCCCCCC----cccCCCCCCcEEecccccCCCCC------ccccCCCCCccEEEccCCcCcccC-----Ccc
Q 002186 296 KSLDLSDNRLSGPIP----ESFADLKNLRLLSLMYNEMSGTV------PESLVQLPSLEILFIWNNYFSGSL-----PEN 360 (955)
Q Consensus 296 ~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~------p~~l~~l~~L~~L~L~~N~l~~~~-----p~~ 360 (955)
+.|++++|.+++..+ ..+..+++|+.+++++|.+.+.. ...+..+++|+.|++.++.+.... +..
T Consensus 226 ~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~ 305 (549)
T 2z81_A 226 KKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305 (549)
T ss_dssp CEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH
T ss_pred cceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhh
Confidence 888888887765433 33456677888888877766531 123445566666666666543211 001
Q ss_pred cCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCc-cCCCCCcEEECcCCccccccch---hccCC
Q 002186 361 LGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSL-SNCSSLVRLRLEDNSFSGEIPL---KFSQL 436 (955)
Q Consensus 361 ~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l 436 (955)
+....+| +.+++++|.+. .+|..+ ..+++|++|++++|++++.+|. .++.+
T Consensus 306 ~~~~~~L------------------------~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l 360 (549)
T 2z81_A 306 YSLLEKV------------------------KRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAW 360 (549)
T ss_dssp HHHSTTC------------------------CEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSS
T ss_pred hhhcccc------------------------eEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhcc
Confidence 1112344 44445554443 334333 3566666666666666665532 25566
Q ss_pred CCCCEEECCCCcCCCCCC--cchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceE
Q 002186 437 PDINYIDLSRNGFTGGIP--TDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVI 514 (955)
Q Consensus 437 ~~L~~L~Ls~N~l~~~ip--~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l 514 (955)
++|++|++++|++++..+ ..+..+++|++|++++| .+. .+|..+..+++|+.|++++|.++.. |.. ..++|+.|
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N-~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~-~~~~L~~L 436 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRN-TFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTC-IPQTLEVL 436 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTC-CCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTT-SCTTCSEE
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCC-CCc-cCChhhcccccccEEECCCCCcccc-cch-hcCCceEE
Confidence 666666666666654322 33556666666666666 443 4565666666677777777766532 211 12578999
Q ss_pred eccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcce
Q 002186 515 ESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDIS 594 (955)
Q Consensus 515 ~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 594 (955)
++++|++++.+ ..+++|++|+|++|+++ .+|. ...+++|++|||++|++++.+|..|..+++|++|++++|+++
T Consensus 437 ~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 510 (549)
T 2z81_A 437 DVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWD 510 (549)
T ss_dssp ECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBC
T ss_pred ECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCcc
Confidence 99999998753 57899999999999998 6776 468999999999999999999999999999999999999999
Q ss_pred eccCCcccc
Q 002186 595 GSIPSGKVL 603 (955)
Q Consensus 595 g~ip~~~~~ 603 (955)
|.+|....+
T Consensus 511 ~~~~~~~~l 519 (549)
T 2z81_A 511 CSCPRIDYL 519 (549)
T ss_dssp CCHHHHHHH
T ss_pred CCCccHHHH
Confidence 999854333
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.7e-51 Score=494.45 Aligned_cols=505 Identities=17% Similarity=0.206 Sum_probs=331.6
Q ss_pred ChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCcccc-ceeecCCC---CcEEEEEcCCCCCCccCCCCcchhc
Q 002186 24 NDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACSWS-GVKCNKNN---TIVVGINLSMKGLSGALPGKPLRIF 99 (955)
Q Consensus 24 ~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~w~-gv~C~~~~---~~v~~l~l~~~~l~g~~~~~~~~~~ 99 (955)
..++...-.++++-...-.+ ..|...... ....|.|. +..|+. + .+|+|-.
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~--~~w~~~~~~----~~~~~~W~~~~~~c~-w~~~~GV~C~~------------------ 79 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNG--KNWSQQGFG----TQPGANWNFNKELDM-WGAQPGVSLNS------------------ 79 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTG--GGCCCCC----------CCCCCSSCGGG-TTCCTTEEECT------------------
T ss_pred hhhHHHHHHHHHHHHHHcCC--CCcccCCcC----CccCCCCCCCCCccc-ccCCCCeEEcC------------------
Confidence 33444555555544443322 367643111 12246896 444544 5 5788721
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcC------Cc------cCCccccCCCCCcEEeCCCCCCCCCCch
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF------SG------HFPGGIQSLRNLLVLDAFSNSFSGSVPA 167 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l------~~------~~p~~~~~l~~L~~LdL~~N~l~~~~p~ 167 (955)
-.+++.|+|++|.++|.+|++|++|++|++|||++|.+ .+ .+|... +..|+ ++++.|.+.+.+|.
T Consensus 80 ~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~ 156 (636)
T 4eco_A 80 NGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRE 156 (636)
T ss_dssp TCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGG
T ss_pred CCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchh
Confidence 13589999999999999999999999999999999986 23 344433 55666 78888888877776
Q ss_pred hhcC-CCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc--CCCCCCCCchhccCCCCCcEEecccccccCC--------
Q 002186 168 EISQ-LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA--GNLLNDQIPAELGMLKTVTHMEIGYNFYQGN-------- 236 (955)
Q Consensus 168 ~~~~-L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~--~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~-------- 236 (955)
.+.. +..+..+++....+.. .....++.+.+. +|++++ +|..++++++|++|++++|.++|.
T Consensus 157 ~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 229 (636)
T 4eco_A 157 DFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWEN 229 (636)
T ss_dssp GSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC
T ss_pred hHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccc
Confidence 6652 2223333332111110 011111111121 344444 455555555555555555555543
Q ss_pred ---------CCcccc--CCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccc-ccc-cCCccCcCC------CccCE
Q 002186 237 ---------IPWQLG--NMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ-LAG-QVPWEFSRV------TTLKS 297 (955)
Q Consensus 237 ---------~p~~~~--~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~-~~p~~~~~l------~~L~~ 297 (955)
+|..++ ++++|++|++++|.+.+.+|..++++++|++|++++|+ ++| .+|..+..+ ++|++
T Consensus 230 ~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~ 309 (636)
T 4eco_A 230 ENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQI 309 (636)
T ss_dssp TTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCE
T ss_pred cccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCE
Confidence 666666 66666666666666666666666666666666666666 666 566555554 66777
Q ss_pred EEccCCCCCCCCCc--ccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCC-CCeeecCC
Q 002186 298 LDLSDNRLSGPIPE--SFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSK-LRWVDVST 374 (955)
Q Consensus 298 L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~-L~~L~ls~ 374 (955)
|++++|+++ .+|. .++.+++|+.|++++|+++|.+| .+..+++|+.|++++|.++ .+|..+..+++ |+.|++++
T Consensus 310 L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~ 386 (636)
T 4eco_A 310 IYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAH 386 (636)
T ss_dssp EECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCS
T ss_pred EECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccC
Confidence 777777776 5666 67777777777777777776666 6666777777777777776 66666777776 77777777
Q ss_pred CcccccCCCCCCCCC--ccceeeccCCCCCCCCCcCcc-------CCCCCcEEECcCCccccccchhccCCCCCCEEECC
Q 002186 375 NNFNGSIPPDICSGG--VLFKLILFSNNFTGSLSPSLS-------NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLS 445 (955)
Q Consensus 375 N~l~g~ip~~~~~~~--~l~~l~l~~n~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 445 (955)
|.++ .+|..+.... +|+.|++++|.+.+.+|..+. .+++|++|+|++|++++..+..+..+++|++|+|+
T Consensus 387 N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls 465 (636)
T 4eco_A 387 NKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLM 465 (636)
T ss_dssp SCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECC
T ss_pred CcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECC
Confidence 7776 6666655443 677777777777777777766 77889999999999985444456678999999999
Q ss_pred CCcCCCCCCcchhh-c-------cCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEecc
Q 002186 446 RNGFTGGIPTDINQ-A-------SKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESH 517 (955)
Q Consensus 446 ~N~l~~~ip~~~~~-~-------~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~ 517 (955)
+|+++ .+|..+.. . ++|++|++++| .+. .+|..+. ...+++|+.|+++
T Consensus 466 ~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N-~l~-~lp~~~~---------------------~~~l~~L~~L~Ls 521 (636)
T 4eco_A 466 GNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFN-KLT-KLSDDFR---------------------ATTLPYLVGIDLS 521 (636)
T ss_dssp SSCCS-BCCSSSSEETTEECTTGGGCCEEECCSS-CCC-BCCGGGS---------------------TTTCTTCCEEECC
T ss_pred CCCCC-CcCHHHhccccccccccCCccEEECcCC-cCC-ccChhhh---------------------hccCCCcCEEECC
Confidence 99998 56654332 2 27777777777 443 4444443 0134455556666
Q ss_pred ccccccccCCCCCcccccceeee------ccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCC
Q 002186 518 MNNLSGTIPESVSNCVELERIDL------ANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFN 591 (955)
Q Consensus 518 ~N~l~g~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 591 (955)
+|++++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|..+. ++|++||+++|
T Consensus 522 ~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N 597 (636)
T 4eco_A 522 YNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDN 597 (636)
T ss_dssp SSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSC
T ss_pred CCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCC
Confidence 666665 6777777777788777 56888999999999999999999999999 67888766 79999999999
Q ss_pred ccee
Q 002186 592 DISG 595 (955)
Q Consensus 592 ~l~g 595 (955)
++..
T Consensus 598 ~l~~ 601 (636)
T 4eco_A 598 PNIS 601 (636)
T ss_dssp TTCE
T ss_pred CCcc
Confidence 8874
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=467.88 Aligned_cols=489 Identities=19% Similarity=0.183 Sum_probs=423.8
Q ss_pred CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEE
Q 002186 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVL 154 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 154 (955)
..+..++++++.+.+..+..+.. +++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|+.+++|++|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~--l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTT--CSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred ccccEEEccCCccCccChhHhhC--CCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccc
Confidence 35788999999998877666666 8999999999999999889999999999999999999999989999999999999
Q ss_pred eCCCCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCC----cEEecc
Q 002186 155 DAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV----THMEIG 229 (955)
Q Consensus 155 dL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L----~~L~l~ 229 (955)
++++|.+++..+..++++++|++|+|++|.+++ .+|..|+++++|++|++++|.+++..|..++.+++| +.++++
T Consensus 106 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~ 185 (570)
T 2z63_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (570)
T ss_dssp ECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECT
T ss_pred cccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccC
Confidence 999999997766679999999999999999987 579999999999999999999999888889988888 899999
Q ss_pred cccccCCCCccccCCCCCcEEeccCCCCCC-CCCccccCCCCCCEEEecccccc------ccCCccCcCCC--ccCEEEc
Q 002186 230 YNFYQGNIPWQLGNMSEVQYLDIAGANLSG-SIPKELSNLTKLESLFLFRNQLA------GQVPWEFSRVT--TLKSLDL 300 (955)
Q Consensus 230 ~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~-~~p~~l~~l~~L~~L~L~~N~l~------~~~p~~~~~l~--~L~~L~L 300 (955)
+|.+.+..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+. ......+..+. .++.+++
T Consensus 186 ~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 186 LNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp TCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 999998888777666 89999999985442 34556777888887766543322 22223344443 3567778
Q ss_pred cCC-CCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccc
Q 002186 301 SDN-RLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 301 s~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
+.| .+.+.+|..|..+++|+.|++++|.+. .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 265 AYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp EETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCC
T ss_pred hcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccc
Confidence 777 777888899999999999999999988 578888888 9999999999988 5665 477889999999999887
Q ss_pred cCCCCCCCCCccceeeccCCCCCCCC--CcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCC-cc
Q 002186 380 SIPPDICSGGVLFKLILFSNNFTGSL--SPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TD 456 (955)
Q Consensus 380 ~ip~~~~~~~~l~~l~l~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip-~~ 456 (955)
.++. ...+.|+.|++++|.+++.. |..+..+++|++|++++|++++..+. +..+++|++|++++|.+.+..| ..
T Consensus 340 ~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~ 416 (570)
T 2z63_A 340 AFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSV 416 (570)
T ss_dssp BCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCT
T ss_pred cccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhh
Confidence 7665 56788999999999988764 67788999999999999999976655 9999999999999999998776 56
Q ss_pred hhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccC-CCCCC-CCcCCccceEeccccccccccCCCCCcccc
Q 002186 457 INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNIT-GNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVE 534 (955)
Q Consensus 457 ~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~-~~~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~ 534 (955)
+..+++|++|++++| .+.+..|..+..+++|+.|++++|.++ +.+|. +..+++|+.|++++|++++..|..+.++++
T Consensus 417 ~~~l~~L~~L~l~~n-~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 495 (570)
T 2z63_A 417 FLSLRNLIYLDISHT-HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495 (570)
T ss_dssp TTTCTTCCEEECTTS-CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhcCCCCCEEeCcCC-cccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccC
Confidence 888999999999999 777888888899999999999999998 56664 588999999999999999999999999999
Q ss_pred cceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCC
Q 002186 535 LERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPA 575 (955)
Q Consensus 535 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 575 (955)
|+.|+|++|++++..|..+..+++|+.|++++|.+++..|.
T Consensus 496 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 496 LQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99999999999999999999999999999999999988775
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.1e-49 Score=431.77 Aligned_cols=245 Identities=17% Similarity=0.199 Sum_probs=197.6
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
..++||+|+||+||||++ .+++.||||+++... ...+.|.+|++++++++|||||+++|+|.+++..+||||
T Consensus 30 ~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~E 109 (308)
T 4gt4_A 30 FMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFS 109 (308)
T ss_dssp EEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEE
Confidence 457899999999999985 357899999997532 235789999999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 767 YLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 767 y~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
||++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||+|+++.+||
T Consensus 110 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 110 YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp CCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred cCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCCEEE
Confidence 9999999999953 368999999999999999999998 9999999999999999999999
Q ss_pred CcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +.+..+
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~------~~~~~i 260 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ------DVVEMI 260 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH------HHHHHH
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH------HHHHHH
Confidence 99999986543221 12235556889999999999999999999999999999 77887643211 111111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......+.+ .++...+.+++.+||+.||++||||+||+++|+...
T Consensus 261 ~~~~~~~~p---~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 261 RNRQVLPCP---DDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HcCCCCCCc---ccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111111111 233456778999999999999999999999998753
No 18
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=8.8e-50 Score=430.76 Aligned_cols=245 Identities=18% Similarity=0.220 Sum_probs=197.1
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 17 l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 96 (299)
T 4asz_A 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEY 96 (299)
T ss_dssp EEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEc
Confidence 567899999999999985 358899999997643 3466799999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 768 LPNGNLSEKIRT---------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 768 ~~~gsL~~~l~~---------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
|++|||.++|+. .++|.++.+|+.|||+||+|||+. +||||||||+|||++.++.+||+|||
T Consensus 97 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki~DFG 173 (299)
T 4asz_A 97 MKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFG 173 (299)
T ss_dssp CTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCS
T ss_pred CCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEECCcc
Confidence 999999999964 468999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccc
Q 002186 833 FKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 833 l~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
+|+....... ....++..|++||+.....++.++|||||||++|||+| |+.||.+.... +.+..+....
T Consensus 174 la~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~~~ 247 (299)
T 4asz_A 174 MSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN------EVIECITQGR 247 (299)
T ss_dssp CHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHHTC
T ss_pred cceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH------HHHHHHHcCC
Confidence 9986543321 11224566889999999999999999999999999999 88888643211 1111111111
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
....++ ....++.+++.+||+.||++||||+||++.|+++.
T Consensus 248 ~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 248 VLQRPR---TCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCc---cchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111111 23356778999999999999999999999998763
No 19
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=8.4e-50 Score=437.03 Aligned_cols=245 Identities=17% Similarity=0.196 Sum_probs=193.3
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..++||+|+||+||+|+. .+|+.||||+++... ...+.|.+|+++|++++|||||+++|+|.+++..||||||
T Consensus 45 l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey 124 (329)
T 4aoj_A 45 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124 (329)
T ss_dssp EEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred EEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 567899999999999984 358899999997643 3456799999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 768 LPNGNLSEKIRT-----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 768 ~~~gsL~~~l~~-----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
|++|||.++++. .++|.++.+|+.|||+||+|||+. +||||||||+|||++.++.+||+|
T Consensus 125 ~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~Ki~D 201 (329)
T 4aoj_A 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGD 201 (329)
T ss_dssp CTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECC
T ss_pred CCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcEEEcc
Confidence 999999999964 368999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccc
Q 002186 831 FGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 831 fGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+++....... ....++..|++||+..+..++.++|||||||++|||+| |+.||.+.... +.+..+..
T Consensus 202 FGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~------~~~~~i~~ 275 (329)
T 4aoj_A 202 FGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT------EAIDCITQ 275 (329)
T ss_dssp CC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH------HHHHHHHH
T ss_pred cccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH------HHHHHHHc
Confidence 999986543221 11234566889999999999999999999999999999 88888643211 11111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......+. ....++.+++.+||+.||++||||+||+++|+.+.
T Consensus 276 g~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 276 GRELERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp TCCCCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11111111 23356778999999999999999999999998764
No 20
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-49 Score=427.43 Aligned_cols=247 Identities=17% Similarity=0.228 Sum_probs=192.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||+||+|+..+ .||||+++... ...+.|.+|++++++++|||||+++|+|.+ +..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCC
Confidence 56789999999999999753 59999987532 235678999999999999999999999865 5689999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----CC
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~ 844 (955)
||.++|+. .++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+....... ..
T Consensus 117 sL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~ 193 (307)
T 3omv_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC------------
T ss_pred CHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecc
Confidence 99999964 578999999999999999999998 999999999999999999999999999986543221 12
Q ss_pred cccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 845 PAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
..+++.|++||+... .+++.++|||||||++|||+||+.||.+..... ............+. . .....+....
T Consensus 194 ~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~p~-~--~~~~~~~~~~ 269 (307)
T 3omv_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYASPD-L--SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCCCC-S--TTSCTTSCHH
T ss_pred cccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCCCC-c--ccccccchHH
Confidence 235677889998864 358999999999999999999999997433211 01101111111111 1 1111233456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++||||+||+++|+.++
T Consensus 270 l~~li~~cl~~dP~~RPs~~ei~~~Le~l~ 299 (307)
T 3omv_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHTCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 778999999999999999999999988764
No 21
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.1e-49 Score=431.08 Aligned_cols=256 Identities=20% Similarity=0.240 Sum_probs=197.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC----eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 770 (955)
..+.||+|+||+||+|+. +|+.||||+++........++.|+..+.+++|||||+++|+|.+++ ..|||||||++
T Consensus 7 L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 567899999999999997 6999999999765444444556777778899999999999998654 57999999999
Q ss_pred CChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcC-----CCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 771 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 771 gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~-----~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
|||.++|+. ..+|.++.+++.|+|+||+|||+. +.++||||||||+|||+|.++++||+|||+++........
T Consensus 86 gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 165 (303)
T 3hmm_A 86 GSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI 165 (303)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEE
T ss_pred CcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCce
Confidence 999999976 679999999999999999999986 3569999999999999999999999999999865433211
Q ss_pred -----CcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhCCCCCCCCCCCC----Ccc-----cccc----
Q 002186 844 -----FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ----NKP-----IDGL---- 899 (955)
Q Consensus 844 -----~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~----~~~-----~~~~---- 899 (955)
...++++|++||+..+. .++.++||||||||+|||+||+.|+......+ ... ....
T Consensus 166 ~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 245 (303)
T 3hmm_A 166 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVV 245 (303)
T ss_dssp SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHH
T ss_pred eeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHH
Confidence 12367778999988653 46788999999999999999988775322111 000 0000
Q ss_pred ccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 900 LGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
..+..++. ++......+....+.+++.+||+.||++||||+||+++|+++.+
T Consensus 246 ~~~~~rp~-~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 246 CEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCC-CCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 11111111 11011123456678899999999999999999999999987743
No 22
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.3e-47 Score=467.01 Aligned_cols=444 Identities=21% Similarity=0.252 Sum_probs=344.4
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEc-cCCcCCccCCccccCCC-CCc--------------EEeC-CCCCCCC
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDI-SRNNFSGHFPGGIQSLR-NLL--------------VLDA-FSNSFSG 163 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~~p~~~~~l~-~L~--------------~LdL-~~N~l~~ 163 (955)
.+++.|+|++|.+.|.+|++|++|++|++||| ++|.++|..|-.-.... .+. .++. ....+.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 36899999999999999999999999999999 99999887553211110 000 0000 0011111
Q ss_pred C-----------CchhhcCCCcceEEEecC--CCCcccCCCCcCCCCCCcEEEccCCCCCC-----------------CC
Q 002186 164 S-----------VPAEISQLEHLKVLNLAG--SYFSGPIPSQFGSFKSLEFLHLAGNLLND-----------------QI 213 (955)
Q Consensus 164 ~-----------~p~~~~~L~~L~~L~Ls~--n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~ 213 (955)
. .+........++.+.++. |.+++ +|..|+++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1 111112333455555554 88998 89999999999999999999998 49
Q ss_pred chhcc--CCCCCcEEecccccccCCCCccccCCCCCcEEeccCCC-CCC-CCCccccCCC-------CCCEEEecccccc
Q 002186 214 PAELG--MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGAN-LSG-SIPKELSNLT-------KLESLFLFRNQLA 282 (955)
Q Consensus 214 p~~l~--~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~-l~~-~~p~~l~~l~-------~L~~L~L~~N~l~ 282 (955)
|..++ ++++|++|++++|.+.+.+|..++++++|++|++++|+ ++| .+|..+++++ +|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 998 8888776655 9999999999999
Q ss_pred ccCCc--cCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCC-ccEEEccCCcCcccCCc
Q 002186 283 GQVPW--EFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS-LEILFIWNNYFSGSLPE 359 (955)
Q Consensus 283 ~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~-L~~L~L~~N~l~~~~p~ 359 (955)
.+|. .|.++++|+.|+|++|+++ .+| .|+.+++|+.|++++|+++ .+|..+..+++ |+.|++++|.++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8999999999999999999 788 8999999999999999999 89999999999 999999999998 7888
Q ss_pred ccCCCCC--CCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchh-ccCC
Q 002186 360 NLGRNSK--LRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK-FSQL 436 (955)
Q Consensus 360 ~~~~~~~--L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l 436 (955)
.+...+. |+.|++++|.+.|.+|...+... ...+++|+.|+|++|+++. +|.. +..+
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~-------------------~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l 696 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMD-------------------DYKGINASTVTLSYNEIQK-FPTELFATG 696 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTT-------------------TCCCCCEEEEECCSSCCCS-CCHHHHHTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhc-------------------cccCCCcCEEEccCCcCCc-cCHHHHccC
Confidence 8877654 99999999999887664221110 1124578888888888884 4444 4578
Q ss_pred CCCCEEECCCCcCCCCCCcchhh--------ccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcC
Q 002186 437 PDINYIDLSRNGFTGGIPTDINQ--------ASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSC 508 (955)
Q Consensus 437 ~~L~~L~Ls~N~l~~~ip~~~~~--------~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~ 508 (955)
++|+.|+|++|+++ .+|..+.. +++|++|++++| .+. .+|..+. ...+
T Consensus 697 ~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N-~L~-~lp~~l~---------------------~~~l 752 (876)
T 4ecn_A 697 SPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFN-KLT-SLSDDFR---------------------ATTL 752 (876)
T ss_dssp CCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSS-CCC-CCCGGGS---------------------TTTC
T ss_pred CCCCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCC-CCc-cchHHhh---------------------hccC
Confidence 88888888888888 55554322 125555555555 222 2333332 0145
Q ss_pred CccceEeccccccccccCCCCCcccccceeeecc------ccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCC
Q 002186 509 KSISVIESHMNNLSGTIPESVSNCVELERIDLAN------NKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSS 582 (955)
Q Consensus 509 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 582 (955)
++|+.|++++|++++ +|..+.++++|+.|+|++ |++.+.+|..+.++++|+.|+|++|++ +.+|..+. ++
T Consensus 753 ~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~ 828 (876)
T 4ecn_A 753 PYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQ 828 (876)
T ss_dssp TTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SS
T ss_pred CCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CC
Confidence 566666666666766 677777788888888765 889999999999999999999999999 78898876 69
Q ss_pred CcEEECCCCcceeccC
Q 002186 583 LTVLNVSFNDISGSIP 598 (955)
Q Consensus 583 L~~L~ls~N~l~g~ip 598 (955)
|+.||+++|++...-+
T Consensus 829 L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 829 LYILDIADNPNISIDV 844 (876)
T ss_dssp SCEEECCSCTTCEEEC
T ss_pred CCEEECCCCCCCccCh
Confidence 9999999999975443
No 23
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.6e-47 Score=452.61 Aligned_cols=457 Identities=18% Similarity=0.164 Sum_probs=322.3
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 57999999998 5777766 89999999999999888889999999999999999999888889999999999999999
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC--cEEeccCCCC--C
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV--QYLDIAGANL--S 258 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L--~~L~Ls~n~l--~ 258 (955)
.++ .+|.. .+++|++|+|++|.+++ .+|..++.+++|++|++++|.+.+ ..+..+++| ++|++++|.+ .
T Consensus 80 ~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 80 KLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred cee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeeccccccc
Confidence 998 56665 89999999999999987 578888888888888888888775 345666666 8888888888 6
Q ss_pred CCCCccccCCC-CCCEEEeccccccccCCc-cCcCCCccCEEEccCCC-------CCCCCCcccCCCCCCcEEecccccC
Q 002186 259 GSIPKELSNLT-KLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNR-------LSGPIPESFADLKNLRLLSLMYNEM 329 (955)
Q Consensus 259 ~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~l 329 (955)
+..|..+..++ +...+++++|++.+.++. .+..+++|+.|++++|. +.+.+| .++.+++|+.|+++.|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 77777766655 233456666766655543 45667777777777776 444444 566677777777776666
Q ss_pred CCCCccccC---CCCCccEEEccCCcCcccCCccc-----CCCCCCCeeecCCCcccccCCC-CCCCC---Cccceeecc
Q 002186 330 SGTVPESLV---QLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGSIPP-DICSG---GVLFKLILF 397 (955)
Q Consensus 330 ~~~~p~~l~---~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~ls~N~l~g~ip~-~~~~~---~~l~~l~l~ 397 (955)
++..+..+. ..++|++|++++|.++|.+|..+ +.+++|+.+++++|.+ .+|. .++.. ..++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 543222111 13466666666666666666665 5666666666666665 3441 11111 335555555
Q ss_pred CCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCC--CCCcchhhccCCcccccCCCCCCC
Q 002186 398 SNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG--GIPTDINQASKLEYFNVSNNPKLG 475 (955)
Q Consensus 398 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ip~~~~~~~~L~~L~ls~N~~l~ 475 (955)
+|.+..... +..+++|++|++++|++++.+|..+..+++|++|++++|++++ .+|..+..
T Consensus 311 ~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~---------------- 372 (520)
T 2z7x_B 311 GTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ---------------- 372 (520)
T ss_dssp SSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT----------------
T ss_pred CCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh----------------
Confidence 555433210 1345555555555555555555555555555555555555553 23334444
Q ss_pred CCCCcccCCCCccccccCcccccCCCCCC--CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhh
Q 002186 476 GMIPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVL 553 (955)
Q Consensus 476 ~~~p~~~~~l~~L~~l~ls~n~l~~~~p~--~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 553 (955)
+++|+.|++++|.+++.+|. +..+++|+.|++++|.+++.+|..+. ++|+.|+|++|+++ .+|..+
T Consensus 373 ---------l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 373 ---------MKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp ---------CTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGG
T ss_pred ---------CCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhh
Confidence 44555555555555544442 35567788888888888888877665 78999999999999 788888
Q ss_pred cCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCccc
Q 002186 554 ARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKV 602 (955)
Q Consensus 554 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~ 602 (955)
..+++|++|+|++|+++...+..|..+++|++|++++|++++.++..+.
T Consensus 441 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~ 489 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDY 489 (520)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHHHHHH
T ss_pred hcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCCchHH
Confidence 8999999999999999964444599999999999999999998775443
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.1e-46 Score=450.52 Aligned_cols=556 Identities=19% Similarity=0.159 Sum_probs=365.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCc
Q 002186 40 DDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV 119 (955)
Q Consensus 40 ~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~ 119 (955)
|+...+++|... .+.+|....|......| +-++.+++ .+|+.+- ..+++|||++|+|++..|.
T Consensus 8 ~~~~~~~~~~~~---------~p~~~~~c~~~~~~~~~---~c~~~~l~-~vP~~lp----~~~~~LdLs~N~i~~l~~~ 70 (635)
T 4g8a_A 8 DDDDKLAAANSS---------IPESWEPCVEVVPNITY---QCMELNFY-KIPDNLP----FSTKNLDLSFNPLRHLGSY 70 (635)
T ss_dssp --------------------------CCSEEEETTTEE---ECTTSCCS-SCCSSSC----TTCCEEECTTSCCCEECTT
T ss_pred CCcchhhcccCC---------CCCCCCCccccCCCCEE---ECCCCCcC-ccCCCCC----cCCCEEEeeCCCCCCCCHH
Confidence 344556666532 23456554444323333 33334443 2443321 3689999999999998889
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L 199 (955)
+|.++++|++|||++|+|++..|++|+++++|++|||++|++++..+..|.++++|++|+|++|.+++..+..|+++++|
T Consensus 71 ~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L 150 (635)
T 4g8a_A 71 SFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTL 150 (635)
T ss_dssp TTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTC
T ss_pred HHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCccc
Confidence 99999999999999999999989999999999999999999998777889999999999999999998878889999999
Q ss_pred cEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC----cEEeccCCCCCCCCCccccCCCCCCEE
Q 002186 200 EFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV----QYLDIAGANLSGSIPKELSNLTKLESL 274 (955)
Q Consensus 200 ~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L----~~L~Ls~n~l~~~~p~~l~~l~~L~~L 274 (955)
++|+|++|.+++ .+|..++.+++|++|++++|.+++..|..+..+.++ ..++++.|.+....+..+ ....++.+
T Consensus 151 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l 229 (635)
T 4g8a_A 151 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKL 229 (635)
T ss_dssp CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEE
T ss_pred CeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhh
Confidence 999999999976 478899999999999999999998888877665543 478899999886555444 34456788
Q ss_pred EeccccccccC-CccCcCCCccCEEEccCC------CCCCCCCcccCCCCCCcEEecccccCCCC---CccccCCCCCcc
Q 002186 275 FLFRNQLAGQV-PWEFSRVTTLKSLDLSDN------RLSGPIPESFADLKNLRLLSLMYNEMSGT---VPESLVQLPSLE 344 (955)
Q Consensus 275 ~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N------~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~l~~l~~L~ 344 (955)
++.+|...... +..+..+..++...+..+ .+.......+..+..+...++..+..... .+..+..+.+++
T Consensus 230 ~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 309 (635)
T 4g8a_A 230 TLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVS 309 (635)
T ss_dssp EEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCS
T ss_pred hhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccc
Confidence 88887654322 233555666665554322 23333344455555566555554443322 223344456677
Q ss_pred EEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCc
Q 002186 345 ILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNS 424 (955)
Q Consensus 345 ~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 424 (955)
.+.+.+|.+.+.. .+.....++.|++++|.+.+..+. ....++.+.+..|...... ....+++|+.|++++|.
T Consensus 310 ~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~~--~~~~l~~L~~L~ls~n~ 382 (635)
T 4g8a_A 310 SFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNAF--SEVDLPSLEFLDLSRNG 382 (635)
T ss_dssp EEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCBC--CCCBCTTCCEEECCSSC
T ss_pred ccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCCc--ccccccccccchhhccc
Confidence 7777776665432 234455677777777776543222 2345666666666654432 23456777777777776
Q ss_pred ccc--ccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCC
Q 002186 425 FSG--EIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNL 502 (955)
Q Consensus 425 l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~ 502 (955)
+.. ..+..+..+.+|++++++.|...+ ++..+..+++|+.++++.|.......+..+..+.+++.++++.|.+.+..
T Consensus 383 l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~ 461 (635)
T 4g8a_A 383 LSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAF 461 (635)
T ss_dssp CBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECC
T ss_pred cccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccccccc
Confidence 642 344555666677777777776653 34445566677777777663333333344556667777777777766655
Q ss_pred CCC-CcCCccceEecccccc-ccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCC
Q 002186 503 PPF-KSCKSISVIESHMNNL-SGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSC 580 (955)
Q Consensus 503 p~~-~~~~~l~~l~l~~N~l-~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 580 (955)
|.. ..++.++.+++++|++ .+.+|..+..+++|++|||++|++++.+|..|+++++|++|+|++|+|++..|..|..+
T Consensus 462 ~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l 541 (635)
T 4g8a_A 462 NGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCL 541 (635)
T ss_dssp TTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTC
T ss_pred ccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCC
Confidence 543 5566777777777653 34456667777777777777777777777777777777777777777777777777777
Q ss_pred CCCcEEECCCCcceeccCCcc-cc-cccCCCccCCCCCCCCCC
Q 002186 581 SSLTVLNVSFNDISGSIPSGK-VL-RLMGSSAYAGNPKLCGAP 621 (955)
Q Consensus 581 ~~L~~L~ls~N~l~g~ip~~~-~~-~~~~~~~~~~n~~lcg~~ 621 (955)
++|++||+++|+|++..|..- .+ ..+....+.+||..|+|.
T Consensus 542 ~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 542 NSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp TTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 777777777777776655431 11 234445566777777643
No 25
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.6e-48 Score=420.75 Aligned_cols=242 Identities=15% Similarity=0.240 Sum_probs=199.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|||||||++|+
T Consensus 78 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 157 (346)
T 4fih_A 78 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157 (346)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEE
T ss_pred EeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCc
Confidence 778899999999999995 589999999997543 235567899999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.+++.+ .+++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+....... ....+++
T Consensus 158 L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp 234 (346)
T 4fih_A 158 LTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTP 234 (346)
T ss_dssp HHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCc
Confidence 9999975 678899999999999999999999 999999999999999999999999999986543322 2234788
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
+|++||+.....++.++||||+||++|||+||+.||.+..... .+..+.+.. ....+.......++.+++.+|
T Consensus 235 ~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~------~~~~i~~~~-~~~~~~~~~~s~~~~dli~~~ 307 (346)
T 4fih_A 235 YWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK------AMKMIRDNL-PPRLKNLHKVSPSLKGFLDRL 307 (346)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCSCGGGSCHHHHHHHHHH
T ss_pred CcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHcCC-CCCCCccccCCHHHHHHHHHH
Confidence 8999999998899999999999999999999999997532211 111111111 111122233345678899999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
|+.||++|||++|++++
T Consensus 308 L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 308 LVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCSSTTTSCCHHHHTTC
T ss_pred cCCChhHCcCHHHHhcC
Confidence 99999999999999864
No 26
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=452.30 Aligned_cols=453 Identities=19% Similarity=0.192 Sum_probs=382.2
Q ss_pred EEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCC
Q 002186 79 GINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFS 158 (955)
Q Consensus 79 ~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~ 158 (955)
.+|+++++++ .+|..+. ++|++|||++|.+++..|..|.++++|++|+|++|++++..|..|+.+++|++|||++
T Consensus 4 ~l~ls~n~l~-~ip~~~~----~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 78 (520)
T 2z7x_B 4 LVDRSKNGLI-HVPKDLS----QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSH 78 (520)
T ss_dssp EEECTTSCCS-SCCCSCC----TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCS
T ss_pred eEecCCCCcc-ccccccc----ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCC
Confidence 4789999998 4776543 6899999999999988889999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCC--cEEecccccc--
Q 002186 159 NSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY-- 233 (955)
Q Consensus 159 N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~l-- 233 (955)
|.++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| +.|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9999 57766 89999999999999997 578999999999999999999986 467778888 9999999999
Q ss_pred cCCCCccccCCC-CCcEEeccCCCCCCCCCc-cccCCCCCCEEEecccc-------ccccCCccCcCCCccCEEEccCCC
Q 002186 234 QGNIPWQLGNMS-EVQYLDIAGANLSGSIPK-ELSNLTKLESLFLFRNQ-------LAGQVPWEFSRVTTLKSLDLSDNR 304 (955)
Q Consensus 234 ~g~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (955)
.+..|..+.++. +...+++++|.+.+.+++ .+.++++|+.|++++|. +.+.+| .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888898888876 455678899998877665 57889999999999998 777776 78999999999999998
Q ss_pred CCCCCCcccC---CCCCCcEEecccccCCCCCcccc-----CCCCCccEEEccCCcCcccCC-cccCCC---CCCCeeec
Q 002186 305 LSGPIPESFA---DLKNLRLLSLMYNEMSGTVPESL-----VQLPSLEILFIWNNYFSGSLP-ENLGRN---SKLRWVDV 372 (955)
Q Consensus 305 l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p-~~~~~~---~~L~~L~l 372 (955)
+++..+..+. ..++|+.|++++|+++|.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++
T Consensus 232 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 232 TTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEE
T ss_pred cCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEc
Confidence 8754322211 24689999999999999999998 8999999999999999 566 444433 67999999
Q ss_pred CCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcccc--ccchhccCCCCCCEEECCCCcCC
Q 002186 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG--EIPLKFSQLPDINYIDLSRNGFT 450 (955)
Q Consensus 373 s~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~ 450 (955)
++|.+.+.. ....+..|+.|++++|.+++.+|..+..+++|++|++++|++++ .+|..+..+++|++|++++|+++
T Consensus 310 ~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~ 387 (520)
T 2z7x_B 310 SGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVS 387 (520)
T ss_dssp ESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCB
T ss_pred CCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCC
Confidence 999986432 12467889999999999999999999999999999999999997 67788999999999999999999
Q ss_pred CCCCcc-hhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccCCCC
Q 002186 451 GGIPTD-INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV 529 (955)
Q Consensus 451 ~~ip~~-~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~ 529 (955)
+.+|.. +..+++|++|++++| .+.+.+|..+. ++|+.|++++|+++ .+|..+
T Consensus 388 ~~l~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~l~-------------------------~~L~~L~Ls~N~l~-~ip~~~ 440 (520)
T 2z7x_B 388 YDEKKGDCSWTKSLLSLNMSSN-ILTDTIFRCLP-------------------------PRIKVLDLHSNKIK-SIPKQV 440 (520)
T ss_dssp CCGGGCSCCCCTTCCEEECCSS-CCCGGGGGSCC-------------------------TTCCEEECCSSCCC-CCCGGG
T ss_pred cccccchhccCccCCEEECcCC-CCCcchhhhhc-------------------------ccCCEEECCCCccc-ccchhh
Confidence 867764 667778888888887 44443332211 46777788888887 678878
Q ss_pred CcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccC
Q 002186 530 SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 574 (955)
Q Consensus 530 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 574 (955)
..+++|++|+|++|+++...+..+..+++|++|+|++|.+++..+
T Consensus 441 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 441 VKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 899999999999999995433448899999999999999987544
No 27
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-47 Score=409.25 Aligned_cols=243 Identities=19% Similarity=0.205 Sum_probs=191.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 766 (955)
..++||+|+||+||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+ ++.+|||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 446799999999999984 589999999997533 235678999999999999999999999875 346899999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||++|+|.+++++ .+++.....|+.||++||+|||++ .++||||||||+|||++. ++.+||+|||+|+........
T Consensus 110 y~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~ 188 (290)
T 3fpq_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccC
Confidence 9999999999975 568889999999999999999987 224999999999999984 789999999999865433333
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+++.|++||+..+ +++.++|||||||++|||+||+.||.+...... ....+.....+... ......++.
T Consensus 189 ~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~--~~~~i~~~~~~~~~-----~~~~~~~~~ 260 (290)
T 3fpq_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ--IYRRVTSGVKPASF-----DKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH--HHHHHTTTCCCGGG-----GGCCCHHHH
T ss_pred CcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHH--HHHHHHcCCCCCCC-----CccCCHHHH
Confidence 3347788999998865 699999999999999999999999974332111 00111111111100 111224577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|++++
T Consensus 261 ~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhHCcCHHHHhcC
Confidence 89999999999999999999863
No 28
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.3e-47 Score=415.30 Aligned_cols=241 Identities=16% Similarity=0.124 Sum_probs=194.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||+||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||++|+|
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence 667899999999999994 6899999999975432 24689999999999999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC-------C
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-------S 843 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~-------~ 843 (955)
.++|++ .+++.+...|+.|++.||+|||+. +||||||||+|||++.++ .+||+|||+|+....... .
T Consensus 138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~ 214 (336)
T 4g3f_A 138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214 (336)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence 999975 578999999999999999999999 999999999999999987 699999999986543221 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...++++|++||+..+..++.++||||+||++|||+||+.||.+..... .......+..... ..++.....+.
T Consensus 215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~~~~~~~-----~~~~~~s~~~~ 287 (336)
T 4g3f_A 215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIASEPPPIR-----EIPPSCAPLTA 287 (336)
T ss_dssp CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHHHSCCGGG-----GSCTTSCHHHH
T ss_pred ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHcCCCCch-----hcCccCCHHHH
Confidence 1236778999999999999999999999999999999999997533211 1111111111000 11122335577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSG 949 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~ 949 (955)
+++.+||+.||++|||++|++++|..
T Consensus 288 ~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 288 QAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 88999999999999999999987754
No 29
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.5e-47 Score=415.70 Aligned_cols=242 Identities=16% Similarity=0.192 Sum_probs=191.9
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+|. ..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+++|++++|||||++++++++++..||||
T Consensus 25 ~Y~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 25 KYV--RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CEE--EEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceE--EeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 455 88899999999999998 4689999999997543 23567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||++|+|.++|.. ..++.+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+......
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 179 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCCc
Confidence 99999999999964 236778889999999999999999 99999999999999999999999999998654322
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++++|++||+..+..++.++||||+|||+|||+||+.||.+.... ..+..+.......... ...
T Consensus 180 ~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~~~~~~~---~~s 250 (350)
T 4b9d_A 180 ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK------NLVLKIISGSFPPVSL---HYS 250 (350)
T ss_dssp HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCCT---TSC
T ss_pred ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHHHHHcCCCCCCCc---cCC
Confidence 1 1123677899999999999999999999999999999999999753211 1111222111111111 223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 45778999999999999999999986
No 30
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7e-46 Score=441.87 Aligned_cols=486 Identities=20% Similarity=0.203 Sum_probs=346.9
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
..+.|.++|.++ .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 7 ~~~c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~ 83 (549)
T 2z81_A 7 SGVCDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSD 83 (549)
T ss_dssp TSEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred CceEECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCC
Confidence 344688888887 5666554 7888999999988888888888888888888888888887778888888888888888
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCC-ccccCCCCCcEEeccCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIP-WQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
|.+++..|..|+++++|++|+|++|.+++ ..|..++.+++|++|++++|.+.+.+| ..+.++++|++|++++|.+++.
T Consensus 84 n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 163 (549)
T 2z81_A 84 NHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNY 163 (549)
T ss_dssp SCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccccc
Confidence 88887777778888888888888888876 356677777777777777776444444 4566677777777777777766
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCC--C-cccCCCCCCcEEecccccCCCCCc---
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI--P-ESFADLKNLRLLSLMYNEMSGTVP--- 334 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p-~~~~~l~~L~~L~Ls~N~l~~~~p--- 334 (955)
+|..+..+++|++|+++.|.+....+..+..+++|++|++++|++++.. | .....+++|+.|++++|.+++..+
T Consensus 164 ~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 164 QSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp CTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred ChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH
Confidence 6666766777777777766654332222345666666666666666531 1 122345566666666665554322
Q ss_pred -cccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCC-----CCCcC
Q 002186 335 -ESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG-----SLSPS 408 (955)
Q Consensus 335 -~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~-----~~p~~ 408 (955)
..+..+++|+.+++++|.+.+...-.. .....+.....++.+.+.++.+.. .++..
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~------------------~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~ 305 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNP------------------SESDVVSELGKVETVTIRRLHIPQFYLFYDLSTV 305 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCC------------------CTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHH
T ss_pred HHHhhhhccccccccccccccccccccc------------------cchhhhhhhcccccccccccccchhhhcccchhh
Confidence 223445556666666655544210000 000112223344444444444332 12222
Q ss_pred ccCCCCCcEEECcCCccccccchhc-cCCCCCCEEECCCCcCCCCCCc---chhhccCCcccccCCCCCCCCCCC--ccc
Q 002186 409 LSNCSSLVRLRLEDNSFSGEIPLKF-SQLPDINYIDLSRNGFTGGIPT---DINQASKLEYFNVSNNPKLGGMIP--AQT 482 (955)
Q Consensus 409 ~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ip~---~~~~~~~L~~L~ls~N~~l~~~~p--~~~ 482 (955)
+...++|+.|++++|++. .+|..+ ..+++|++|++++|++++.+|. .+..+++|++|++++| .+.+..+ ..+
T Consensus 306 ~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~ 383 (549)
T 2z81_A 306 YSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQN-HLRSMQKTGEIL 383 (549)
T ss_dssp HHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTS-CCCCHHHHHHHG
T ss_pred hhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCC-cccccccchhhh
Confidence 344678999999999997 666665 6799999999999999987753 3678899999999999 5554322 457
Q ss_pred CCCCccccccCcccccCCCCCC-CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcE
Q 002186 483 WSLPSLQNFSASACNITGNLPP-FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGV 561 (955)
Q Consensus 483 ~~l~~L~~l~ls~n~l~~~~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 561 (955)
..+++|+.|++++|+++. +|. +..+++|+.|++++|.+++ +|..+ .++|++|||++|++++.+ ..+++|++
T Consensus 384 ~~l~~L~~L~Ls~N~l~~-lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFHP-MPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GGCTTCCEEECTTCCCCC-CCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred hcCCCCCEEECCCCCCcc-CChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcE
Confidence 789999999999999995 554 5788999999999999974 45443 268999999999999764 57899999
Q ss_pred EECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCc-ccccccCCCccCCCCCCCCCC
Q 002186 562 LDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSG-KVLRLMGSSAYAGNPKLCGAP 621 (955)
Q Consensus 562 L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lcg~~ 621 (955)
|+|++|+++ .+|. ...+++|++|++++|++++.+|.. ..+..+....+.+|+..|.++
T Consensus 456 L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 456 LYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999999 5676 467999999999999999877753 455666777889999988754
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.8e-47 Score=418.43 Aligned_cols=245 Identities=22% Similarity=0.212 Sum_probs=194.7
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCC-CCceeEeEEEEcC-CeeEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRH-KNLIRLLGFCYNR-HQAYLL 764 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H-~niv~l~g~~~~~-~~~~lv 764 (955)
..+.||+|+||+||+|+. .+++.||||+++.... ..+.+.+|+++|++++| ||||+++|+|.++ +..|||
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 667899999999999973 2457899999976433 35678899999999976 8999999999764 568999
Q ss_pred EeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCc
Q 002186 765 YDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEP 826 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ 826 (955)
||||++|+|.++|+. .++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~v 224 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVV 224 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCE
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCccceeeCCCCCE
Confidence 999999999999964 257899999999999999999999 99999999999999999999
Q ss_pred eECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccc
Q 002186 827 HLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLG 901 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 901 (955)
||+|||+|+........ ...++..|++||+.....++.++|||||||++|||+| |+.||.+..... . ....+.
T Consensus 225 Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~-~~~~i~ 302 (353)
T 4ase_A 225 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E-FCRRLK 302 (353)
T ss_dssp EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H-HHHHHH
T ss_pred EECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-H-HHHHHH
Confidence 99999999865433221 1224556889999999999999999999999999998 888886432211 1 111111
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 902 EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+-.. ...++ ....++.+++.+||+.||++||||+||+++|+.+
T Consensus 303 ~g~~---~~~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 303 EGTR---MRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HTCC---CCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCC---CCCCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 1111 11111 2234577899999999999999999999999765
No 32
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=421.56 Aligned_cols=245 Identities=15% Similarity=0.254 Sum_probs=200.6
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||+++++|.+++..||||||
T Consensus 152 ~y~--~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 152 YLD--NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp TEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hcE--eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 355 778899999999999994 689999999997643 3355688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 768 LPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
|++|+|.++++. .+++.+...|+.||++||+|||+. +||||||||+|||++.++.+||+|||+|+....... ..
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~ 306 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 306 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCC
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccc
Confidence 999999999975 678888999999999999999999 999999999999999999999999999986543322 22
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLD 924 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 924 (955)
..++++|++||++....|+.++||||+||++|||+||+.||.+..... .. ..+.....+. .........++.+
T Consensus 307 ~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~--~~-~~i~~~~~~~----~~~~~~~s~~~~d 379 (423)
T 4fie_A 307 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLK--AM-KMIRDNLPPR----LKNLHKVSPSLKG 379 (423)
T ss_dssp CEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HH-HHHHHSCCCC----CSCTTSSCHHHHH
T ss_pred cccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH--HH-HHHHcCCCCC----CcccccCCHHHHH
Confidence 347888999999999999999999999999999999999997533211 00 1111111111 1111223356778
Q ss_pred HHHHccCCCCCCCCCHHHHHHH
Q 002186 925 VALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 925 l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
++.+||+.||++|||++|++++
T Consensus 380 li~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 380 FLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHcCCChhHCcCHHHHhcC
Confidence 9999999999999999999874
No 33
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.5e-46 Score=392.43 Aligned_cols=242 Identities=17% Similarity=0.163 Sum_probs=185.7
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..|+
T Consensus 13 g~Y~--i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~i 90 (275)
T 3hyh_A 13 GNYQ--IVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp -CCE--EEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred eCeE--EEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4565 788999999999999985 589999999997532 224568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||| +|+|.+++.+ .++..+...++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+......
T Consensus 91 vmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99999 6899999865 568888899999999999999999 99999999999999999999999999998654332
Q ss_pred C-CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+++.|++||+..+..+ +.++||||+||++|||+||+.||.+... ......+.... ...+. ...
T Consensus 167 ~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~~~~~i~~~~-~~~p~---~~s 236 (275)
T 3hyh_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLFKNISNGV-YTLPK---FLS 236 (275)
T ss_dssp --------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHHTC-CCCCT---TSC
T ss_pred ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HHHHHHHHcCC-CCCCC---CCC
Confidence 2 22347788999999987765 5789999999999999999999974321 11111111111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++.+++.+||+.||++|||++|++++
T Consensus 237 ~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 456788999999999999999999873
No 34
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.1e-46 Score=401.40 Aligned_cols=239 Identities=18% Similarity=0.173 Sum_probs=197.3
Q ss_pred cccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||+||+|+ ..+|+.||||++++.. ...+.+.+|+++|++++|||||++++++++++..||||
T Consensus 34 y~--i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 34 FK--FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp EE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cE--EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 55 78899999999999998 4689999999997532 23567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|||++|+|.+++++ .++..+...|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.......
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 99999999999976 567888889999999999999999 999999999999999999999999999987543221
Q ss_pred ---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 843 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
....++++|++||+..+..++.++||||+||++|||+||+.||.+.... .....+.... ...++ ...
T Consensus 189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~s 258 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG------LIFAKIIKLE-YDFPE---KFF 258 (311)
T ss_dssp CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TCC
T ss_pred ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCc---ccC
Confidence 1234778899999999999999999999999999999999999743211 1111121111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEAL 944 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~ 944 (955)
.++.+++.+||+.||++|||++|+.
T Consensus 259 ~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 259 PKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHHHHHccCCHhHCcChHHHc
Confidence 4577899999999999999999863
No 35
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=9.3e-44 Score=431.37 Aligned_cols=518 Identities=19% Similarity=0.166 Sum_probs=411.6
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.++.+||+.+.+++..+..+.. +++|++|||++|+|+++.|.+|.+|++|++|+|++|+|++..+..|.++++|++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~--l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~ 130 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 130 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTT--CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEE
T ss_pred CCCEEEeeCCCCCCCCHHHHhC--CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEE
Confidence 5789999999998766666766 89999999999999998899999999999999999999988888999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCc----EEeccc
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT----HMEIGY 230 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~----~L~l~~ 230 (955)
|++|++++..+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++..|..+..+++++ .++++.
T Consensus 131 Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~ 210 (635)
T 4g8a_A 131 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 210 (635)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred CCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhccc
Confidence 99999998777889999999999999999976 4688899999999999999999998898887766544 688888
Q ss_pred ccccCCCCccccCCCCCcEEeccCCCCCCCC-CccccCCCCCCEEEeccccc------cccCCccCcCCCccCEEEccCC
Q 002186 231 NFYQGNIPWQLGNMSEVQYLDIAGANLSGSI-PKELSNLTKLESLFLFRNQL------AGQVPWEFSRVTTLKSLDLSDN 303 (955)
Q Consensus 231 n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~L~~N~l------~~~~p~~~~~l~~L~~L~Ls~N 303 (955)
|.+....+. ......++.+++.+|..+..+ +..+..+..++...+..+.. .......+..+..+...++..+
T Consensus 211 n~l~~i~~~-~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~ 289 (635)
T 4g8a_A 211 NPMNFIQPG-AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 289 (635)
T ss_dssp CCCCEECTT-TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEE
T ss_pred CcccccCcc-cccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhh
Confidence 888754443 344456788888888665332 34466777777776654332 2222334555556666655544
Q ss_pred CCCC---CCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCccccc
Q 002186 304 RLSG---PIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGS 380 (955)
Q Consensus 304 ~l~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ 380 (955)
.... ..+..+..+.+++.+++..+.+.... .+....+|+.|++.+|.+.+..+. .+..|+.++++.|.....
T Consensus 290 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~ 364 (635)
T 4g8a_A 290 YLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA 364 (635)
T ss_dssp CCCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB
T ss_pred hhcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC
Confidence 3322 23445666778888888888776432 345567788888888887754443 356678888888876543
Q ss_pred CCCCCCCCCccceeeccCCCCCC--CCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCC-cch
Q 002186 381 IPPDICSGGVLFKLILFSNNFTG--SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIP-TDI 457 (955)
Q Consensus 381 ip~~~~~~~~l~~l~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip-~~~ 457 (955)
. ....++.++.++++.|.+.. ..+..+..+.+|+.|+++.|.+.. ++..+..+++|+.++++.|+.....+ ..+
T Consensus 365 ~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~ 441 (635)
T 4g8a_A 365 F--SEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVF 441 (635)
T ss_dssp C--CCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTT
T ss_pred c--ccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccc
Confidence 2 33456778888888887753 445566678889999999888874 45567888999999998888776655 346
Q ss_pred hhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCC-CCC-CCcCCccceEeccccccccccCCCCCccccc
Q 002186 458 NQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGN-LPP-FKSCKSISVIESHMNNLSGTIPESVSNCVEL 535 (955)
Q Consensus 458 ~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~-~p~-~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L 535 (955)
..+.+++.++++.| .+.+..|..+..+++|+.+++++|.+... .|. +..+++|+.|++++|++++.+|..|.++++|
T Consensus 442 ~~l~~l~~l~ls~n-~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L 520 (635)
T 4g8a_A 442 LSLRNLIYLDISHT-HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520 (635)
T ss_dssp TTCTTCCEEECTTS-CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccccccccccccc-ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC
Confidence 77888999999998 77777788888888999999998875543 443 5788999999999999999999999999999
Q ss_pred ceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCC-CCCcEEECCCCcceeccCCcccccc
Q 002186 536 ERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSC-SSLTVLNVSFNDISGSIPSGKVLRL 605 (955)
Q Consensus 536 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~g~ip~~~~~~~ 605 (955)
++|+|++|++++..|..|..+++|++|||++|+|++.+|..|..+ ++|++|++++|++++.+...+..++
T Consensus 521 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~w 591 (635)
T 4g8a_A 521 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQW 591 (635)
T ss_dssp CEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGGHHHHHH
T ss_pred CEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCcHHHHHH
Confidence 999999999999999999999999999999999999999999998 7899999999999998765444443
No 36
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.2e-46 Score=398.40 Aligned_cols=241 Identities=16% Similarity=0.120 Sum_probs=188.9
Q ss_pred hcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... .....+.+|+++|++++|||||++++++++++..|
T Consensus 25 ~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ 102 (304)
T 3ubd_A 25 QFE--LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLY 102 (304)
T ss_dssp GEE--EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEE
T ss_pred ccE--EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence 365 888999999999999974 368899999997532 22346778999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
+|||||++|+|.+++.+ .+++.+...++.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.....
T Consensus 103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999976 568888899999999999999999 9999999999999999999999999999864332
Q ss_pred CC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 DG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.. ....++++|++||...+..++.++||||+||++|||+||+.||.+.... .....+.... ...+. ..
T Consensus 180 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~------~~~~~i~~~~-~~~p~---~~ 249 (304)
T 3ubd_A 180 EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK------ETMTMILKAK-LGMPQ---FL 249 (304)
T ss_dssp -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TS
T ss_pred CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH------HHHHHHHcCC-CCCCC---cC
Confidence 22 2234778899999999999999999999999999999999999743211 1111111111 11111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
..++.+++.+||+.||++||| ++|+++
T Consensus 250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 345778999999999999998 567765
No 37
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.4e-44 Score=425.49 Aligned_cols=462 Identities=18% Similarity=0.174 Sum_probs=319.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
...+++|+++|++++ +|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 107 (562)
T 3a79_B 31 ELESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDV 107 (562)
T ss_dssp --CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEEC
Confidence 345899999999995 776665 89999999999999888889999999999999999999888999999999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC-CCchhccCCCCCcEEecccccccCCCCccccCCCCC--cEEeccCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND-QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEV--QYLDIAGANL 257 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L--~~L~Ls~n~l 257 (955)
++|.++ .+|.. .+++|++|+|++|++++ .+|..++++++|++|++++|.+.+. .+..+++| ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 999998 56766 89999999999999987 4568888899999999988888763 33444444 8888888888
Q ss_pred --CCCCCccccCCC--CCCEEEeccccccccCCc-cCcCCCccCEEEccCCCC-----CCCCCcccCCCCCCcEEecccc
Q 002186 258 --SGSIPKELSNLT--KLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRL-----SGPIPESFADLKNLRLLSLMYN 327 (955)
Q Consensus 258 --~~~~p~~l~~l~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l-----~~~~p~~~~~l~~L~~L~Ls~N 327 (955)
++..|..+..+. .+ .++++.|.+.+.++. .+..+++|+.+++++|+. .+ ....+..+++|+.|++.++
T Consensus 182 ~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~ 259 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHI 259 (562)
T ss_dssp CCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEE
T ss_pred cccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCC
Confidence 777777776654 22 456677777665543 355677777788777752 11 1234566677777777666
Q ss_pred cCCCCC----ccccCCCCCccEEEccCCcCcccCCccc-----CCCCCCCeeecCCCcccccCCCC-CC---CCCcccee
Q 002186 328 EMSGTV----PESLVQLPSLEILFIWNNYFSGSLPENL-----GRNSKLRWVDVSTNNFNGSIPPD-IC---SGGVLFKL 394 (955)
Q Consensus 328 ~l~~~~----p~~l~~l~~L~~L~L~~N~l~~~~p~~~-----~~~~~L~~L~ls~N~l~g~ip~~-~~---~~~~l~~l 394 (955)
.+.+.. +..+ ..++|++|++++|.++|.+|..+ ..+..|+.++++.|.+ .+|.. ++ ....++.|
T Consensus 260 ~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 260 ETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEE
T ss_pred cCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEE
Confidence 655321 1111 22367777777777776666655 4444444445544444 23311 00 11234455
Q ss_pred eccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCC
Q 002186 395 ILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKL 474 (955)
Q Consensus 395 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l 474 (955)
++++|.+..... ...+++|++|++++|++++.+|..+.++++|++|++++|++++..
T Consensus 337 ~l~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------------------- 393 (562)
T 3a79_B 337 SISDTPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF--------------------- 393 (562)
T ss_dssp EEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT---------------------
T ss_pred EccCCCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc---------------------
Confidence 555554432211 134445555555555555444445555555555555555544311
Q ss_pred CCCCCcccCCCCccccccCcccccCCCCCC--CCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhh
Q 002186 475 GGMIPAQTWSLPSLQNFSASACNITGNLPP--FKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEV 552 (955)
Q Consensus 475 ~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~--~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 552 (955)
.+|..+..+++|+.|++++|.+++.+|. +..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..
T Consensus 394 --~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~ 468 (562)
T 3a79_B 394 --KVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKD 468 (562)
T ss_dssp --HHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTT
T ss_pred --cchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChh
Confidence 1223344555555555555556554443 45677888888888888888887665 78999999999998 67777
Q ss_pred hcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccCCccccc
Q 002186 553 LARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLR 604 (955)
Q Consensus 553 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~ 604 (955)
+..+++|++|+|++|++++..+..|..+++|++|++++|+++|.+|....++
T Consensus 469 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~~~~~~ 520 (562)
T 3a79_B 469 VTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPGIRYLS 520 (562)
T ss_dssp TTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHHHHHHH
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcchHHHHH
Confidence 7799999999999999996444459999999999999999999888655433
No 38
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.9e-44 Score=389.84 Aligned_cols=240 Identities=17% Similarity=0.211 Sum_probs=183.6
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-------
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------- 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------- 759 (955)
.|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 6 DFE--PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HEE--EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred hCE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 355 78899999999999998 46899999999975332 3567889999999999999999999987543
Q ss_pred -----eeEEEEeecCCCChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 760 -----QAYLLYDYLPNGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 760 -----~~~lv~ey~~~gsL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
..|+|||||++|+|.+++... .++.....|+.|+++||+|||+. +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 369999999999999999763 35666788999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC--------------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc
Q 002186 830 EFGFKYLTQLADGS--------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP 895 (955)
Q Consensus 830 DfGl~~~~~~~~~~--------------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~ 895 (955)
|||+|+........ ...+++.|++||...+..++.++||||+||++|||++ ||.....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~----- 232 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQME----- 232 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHH-----
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccH-----
Confidence 99999865432211 1236778999999999999999999999999999997 6642110
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+...... ..++...+......+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~---~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 233 RVRTLTDVRNL---KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHHHTT---CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcC---CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00111111111 112223344455678999999999999999999987
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.2e-43 Score=423.23 Aligned_cols=453 Identities=21% Similarity=0.217 Sum_probs=366.8
Q ss_pred EEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCC
Q 002186 78 VGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAF 157 (955)
Q Consensus 78 ~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~ 157 (955)
..++++++++++ +|..+ .++|++|||++|.+++..|.+|.++++|++|+|++|++++..|+.|+.+++|++|||+
T Consensus 34 ~~l~ls~~~L~~-ip~~~----~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDL----PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp CEEECTTSCCCS-CCTTS----CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred cEEEcCCCCCcc-CCCCC----CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 567889998886 66644 3689999999999999888999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhhcCCCcceEEEecCCCCcc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCC--cEEecccccc-
Q 002186 158 SNSFSGSVPAEISQLEHLKVLNLAGSYFSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTV--THMEIGYNFY- 233 (955)
Q Consensus 158 ~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L--~~L~l~~n~l- 233 (955)
+|.++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|+|++|.+++. .+..+++| +.|++++|.+
T Consensus 109 ~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 109 HNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp TSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCC
T ss_pred CCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeeccccc
Confidence 99999 56766 89999999999999997 4578999999999999999999874 44555555 9999999999
Q ss_pred -cCCCCccccCCC-CCcEEeccCCCCCCCCCc-cccCCCCCCEEEecccc-----ccccCCccCcCCCccCEEEccCCCC
Q 002186 234 -QGNIPWQLGNMS-EVQYLDIAGANLSGSIPK-ELSNLTKLESLFLFRNQ-----LAGQVPWEFSRVTTLKSLDLSDNRL 305 (955)
Q Consensus 234 -~g~~p~~~~~l~-~L~~L~Ls~n~l~~~~p~-~l~~l~~L~~L~L~~N~-----l~~~~p~~~~~l~~L~~L~Ls~N~l 305 (955)
.+..|..+.++. ..-.+++++|.+.+.+++ .+..+++|+.|++++|+ +.+.+ ..+..+++|+.|+++++.+
T Consensus 183 ~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~l 261 (562)
T 3a79_B 183 IKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIET 261 (562)
T ss_dssp CCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEEE
T ss_pred ccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCcC
Confidence 888898888775 223568899999887765 46778999999999985 33322 3467788899998888776
Q ss_pred CCC----CCcccCCCCCCcEEecccccCCCCCcccc-----CCCCCccEEEccCCcCcccCCc-ccC---CCCCCCeeec
Q 002186 306 SGP----IPESFADLKNLRLLSLMYNEMSGTVPESL-----VQLPSLEILFIWNNYFSGSLPE-NLG---RNSKLRWVDV 372 (955)
Q Consensus 306 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l-----~~l~~L~~L~L~~N~l~~~~p~-~~~---~~~~L~~L~l 372 (955)
++. ++..+ ..++|++|++++|+++|.+|..+ ..++.|+.+++..|.+ .+|. .+. ...+|+.|++
T Consensus 262 ~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l 338 (562)
T 3a79_B 262 TWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSI 338 (562)
T ss_dssp CHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEE
T ss_pred cHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEc
Confidence 642 12222 23599999999999999999887 7788888888888877 4552 222 2257999999
Q ss_pred CCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcccc--ccchhccCCCCCCEEECCCCcCC
Q 002186 373 STNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSG--EIPLKFSQLPDINYIDLSRNGFT 450 (955)
Q Consensus 373 s~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~ 450 (955)
++|.+..... ......|+.|++++|.+++.+|..+.++++|++|++++|++++ .+|..|..+++|++|++++|+++
T Consensus 339 ~~n~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~ 416 (562)
T 3a79_B 339 SDTPFIHMVC--PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416 (562)
T ss_dssp ESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCB
T ss_pred cCCCcccccC--ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCC
Confidence 9999863221 1467889999999999999999999999999999999999997 45678999999999999999999
Q ss_pred CCCCcc-hhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccCCCC
Q 002186 451 GGIPTD-INQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV 529 (955)
Q Consensus 451 ~~ip~~-~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~ 529 (955)
+.+|.. +..+++|++|++++| .+.+.+|..+. ++|+.|++++|+++ .+|..+
T Consensus 417 ~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~l~-------------------------~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 417 SHAYDRTCAWAESILVLNLSSN-MLTGSVFRCLP-------------------------PKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp SCCSSCCCCCCTTCCEEECCSS-CCCGGGGSSCC-------------------------TTCSEEECCSSCCC-CCCTTT
T ss_pred CccChhhhcCcccCCEEECCCC-CCCcchhhhhc-------------------------CcCCEEECCCCcCc-ccChhh
Confidence 866654 667778888888887 44433332211 46777777778777 677777
Q ss_pred CcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccC
Q 002186 530 SNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIP 574 (955)
Q Consensus 530 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 574 (955)
.++++|+.|+|++|++++..+..+..+++|+.|+|++|.+.+..|
T Consensus 470 ~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 470 THLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 799999999999999995433448899999999999999987554
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.4e-42 Score=381.21 Aligned_cols=293 Identities=28% Similarity=0.481 Sum_probs=177.3
Q ss_pred CCChhhHHHHHHhhhhCCCCCCCCCCCCCCCCCCCCCCCCCcc--ccceeecCCC--CcEEEEEcCCCCCCc--cCCCCc
Q 002186 22 SANDPYSEALLSLKSELVDDFNSLHDWFVPPGVNPAGKIYACS--WSGVKCNKNN--TIVVGINLSMKGLSG--ALPGKP 95 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~~~~~~~l~~w~~~~~~~~~~~~~~c~--w~gv~C~~~~--~~v~~l~l~~~~l~g--~~~~~~ 95 (955)
.|.++|++||++||+++.+|. .+++|..+ .+||. |.||+|+..+ ++|+.++++++++.| .+|+.+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~--------~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l 72 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT--------TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSL 72 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT--------SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGG
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC--------CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhH
Confidence 577899999999999998876 78999653 56888 9999998744 567766666666666 555555
Q ss_pred chhcCCCCcEEECCC-CcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCc
Q 002186 96 LRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEH 174 (955)
Q Consensus 96 ~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~ 174 (955)
.. +++|++|+|++ |.+.+.+|..|.++++|++|+|++|.+++.+|..|..+++|++|||++|.+++.+|..+.++++
T Consensus 73 ~~--l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 150 (313)
T 1ogq_A 73 AN--LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPN 150 (313)
T ss_dssp GG--CTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTT
T ss_pred hC--CCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCC
Confidence 55 55666666663 5666666666666666666666666666556666666666666666666666556666666666
Q ss_pred ceEEEecCCCCcccCCCCcCCCC-CCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEecc
Q 002186 175 LKVLNLAGSYFSGPIPSQFGSFK-SLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (955)
Q Consensus 175 L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls 253 (955)
|++|+|++|.+++.+|..|++++ +|++|+|++|.+++.+|..+..++ |+.|++++|.+.+.+|..+.+
T Consensus 151 L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~---------- 219 (313)
T 1ogq_A 151 LVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGS---------- 219 (313)
T ss_dssp CCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCT----------
T ss_pred CCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhc----------
Confidence 66666666666555565555555 556666666555555555555554 555555555554444444444
Q ss_pred CCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCC
Q 002186 254 GANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV 333 (955)
Q Consensus 254 ~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 333 (955)
+++|++|++++|++++.+|. +..+++|++|+|++|++++.+|.+|..+++|+.|++++|+++|.+
T Consensus 220 --------------l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~i 284 (313)
T 1ogq_A 220 --------------DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEI 284 (313)
T ss_dssp --------------TSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEEC
T ss_pred --------------CCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccC
Confidence 44455555555544444333 444455555555555555555555555555555555555555555
Q ss_pred ccccCCCCCccEEEccCCc
Q 002186 334 PESLVQLPSLEILFIWNNY 352 (955)
Q Consensus 334 p~~l~~l~~L~~L~L~~N~ 352 (955)
|.. ..+++|+.|++++|.
T Consensus 285 p~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 285 PQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CCS-TTGGGSCGGGTCSSS
T ss_pred CCC-ccccccChHHhcCCC
Confidence 543 445555555555554
No 41
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.5e-41 Score=387.60 Aligned_cols=407 Identities=25% Similarity=0.334 Sum_probs=169.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCC-------------cEEeCCCCCCCCCCc
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNL-------------LVLDAFSNSFSGSVP 166 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~LdL~~N~l~~~~p 166 (955)
..+|++|++++|.+ |.+|.+++++++|++|++++|.+.|.+|..++.+++| ++|++++|.+++ +|
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp 87 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LP 87 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CC
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CC
Confidence 46789999999999 7899999999999999999999999999999988876 666666666664 33
Q ss_pred hhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCC
Q 002186 167 AEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE 246 (955)
Q Consensus 167 ~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~ 246 (955)
.. .++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+++ +| .++++++
T Consensus 88 ~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 88 EL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp SC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred CC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 21 2456666666666665 4532 2566666666666654 2211 1455555555555554 44 3555555
Q ss_pred CcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccc
Q 002186 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMY 326 (955)
Q Consensus 247 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 326 (955)
|++|++++|.+++ +|..+ .+|++|++++|++++ +| .+..+++|++|++++|++++ +|... ++|+.|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcC
Confidence 5555555555543 33322 245555555555544 23 34455555555555555543 22211 2444455555
Q ss_pred ccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCC
Q 002186 327 NEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLS 406 (955)
Q Consensus 327 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p 406 (955)
|+++ .+|. +..+++|++|++++|++++ +|.. .++|+.|++++|.+++ +|.
T Consensus 225 n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~----------------------- 274 (454)
T 1jl5_A 225 NILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPE----------------------- 274 (454)
T ss_dssp SCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCC-----------------------
T ss_pred CcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCc-----------------------
Confidence 5444 3332 4444444444444444443 2221 1344444444444442 222
Q ss_pred cCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCC
Q 002186 407 PSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLP 486 (955)
Q Consensus 407 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~ 486 (955)
. +++|+.|++++|++++. |. -.++|++|++++|++++ ++. ..++|++|++++| .+.+ +|.. ++
T Consensus 275 -~---~~~L~~L~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~-i~~---~~~~L~~L~Ls~N-~l~~-lp~~---~~ 337 (454)
T 1jl5_A 275 -L---PQSLTFLDVSENIFSGL-SE---LPPNLYYLNASSNEIRS-LCD---LPPSLEELNVSNN-KLIE-LPAL---PP 337 (454)
T ss_dssp -C---CTTCCEEECCSSCCSEE-SC---CCTTCCEEECCSSCCSE-ECC---CCTTCCEEECCSS-CCSC-CCCC---CT
T ss_pred -c---cCcCCEEECcCCccCcc-cC---cCCcCCEEECcCCcCCc-ccC---CcCcCCEEECCCC-cccc-cccc---CC
Confidence 1 24555555555555541 11 01455555555555553 111 0124555555555 3332 2322 23
Q ss_pred ccccccCcccccCCCCCCCCcCCccceEecccccccc--ccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEEC
Q 002186 487 SLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSG--TIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDL 564 (955)
Q Consensus 487 ~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 564 (955)
+|+.|++++|.+++ +|. .+++|+.|++++|++++ .+|.++.+ |+.|++.|.+|.. +++|++||+
T Consensus 338 ~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~l 403 (454)
T 1jl5_A 338 RLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHV 403 (454)
T ss_dssp TCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC--------------------
T ss_pred cCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEEC
Confidence 44444444444442 333 34455555555555555 45544432 2345555555542 355666666
Q ss_pred CCCCCcc--ccCCCcCCCCCCcEEECCCCcceeccC
Q 002186 565 SHNSLSG--QIPAKFGSCSSLTVLNVSFNDISGSIP 598 (955)
Q Consensus 565 s~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~ip 598 (955)
++|++++ .+|.+ ++.|.+++|.+.+.+|
T Consensus 404 s~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 404 ETNPLREFPDIPES------VEDLRMNSERVVDPYE 433 (454)
T ss_dssp ------------------------------------
T ss_pred CCCcCCccccchhh------HhheeCcCcccCCccc
Confidence 6666665 44432 3445556666555544
No 42
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.4e-41 Score=386.30 Aligned_cols=410 Identities=22% Similarity=0.305 Sum_probs=252.7
Q ss_pred CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCC-------------CEEEccCCcCCccC
Q 002186 75 TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSL-------------ISLDISRNNFSGHF 141 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~ 141 (955)
.++..++++++.+ |.+|+.+.. +++|++|++++|.+.|.+|.+++++++| ++|++++|.+++ +
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~--L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-l 86 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAEN--VKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-L 86 (454)
T ss_dssp --------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-C
T ss_pred ccchhhhcccCch-hhCChhHhc--ccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-C
Confidence 3567788999999 999999888 8999999999999999999999998875 999999999986 4
Q ss_pred CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCC
Q 002186 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLK 221 (955)
Q Consensus 142 p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 221 (955)
|. ..++|++||+++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|.+++ +| +++.++
T Consensus 87 p~---~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~ 153 (454)
T 1jl5_A 87 PE---LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSS 153 (454)
T ss_dssp CS---CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCT
T ss_pred CC---CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCC
Confidence 44 24799999999999997 6754 4899999999999986 3332 2799999999999987 77 699999
Q ss_pred CCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEcc
Q 002186 222 TVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLS 301 (955)
Q Consensus 222 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 301 (955)
+|++|++++|.+++ +|..+ .+|++|++++|.+++ +| .++++++|++|++++|++++ +|.. .++|++|+++
T Consensus 154 ~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~ 223 (454)
T 1jl5_A 154 FLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAG 223 (454)
T ss_dssp TCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECC
T ss_pred CCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECc
Confidence 99999999999986 66543 589999999999997 56 69999999999999999997 4433 2589999999
Q ss_pred CCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccC
Q 002186 302 DNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSI 381 (955)
Q Consensus 302 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~i 381 (955)
+|+++ .+| .++.+++|+.|++++|++++ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|.+++ +
T Consensus 224 ~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l 292 (454)
T 1jl5_A 224 NNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-L 292 (454)
T ss_dssp SSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-E
T ss_pred CCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-c
Confidence 99999 567 49999999999999999986 5543 4799999999999986 5654 3789999999999986 2
Q ss_pred CCCCCCCCccceeeccCCCCCCCCCcCccCC-CCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhc
Q 002186 382 PPDICSGGVLFKLILFSNNFTGSLSPSLSNC-SSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQA 460 (955)
Q Consensus 382 p~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~ 460 (955)
|.. ...++.|++++|.+++. + .+ ++|++|++++|++++ +|.. +++|++|++++|+++ .+|. .+
T Consensus 293 ~~~---~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l 356 (454)
T 1jl5_A 293 SEL---PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LP 356 (454)
T ss_dssp SCC---CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CC
T ss_pred cCc---CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hh
Confidence 211 13455566666655541 1 12 355555555555554 3332 345555555555555 2333 23
Q ss_pred cCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCC--CCCCCCcCCccceEeccccccccccCCCCCccccccee
Q 002186 461 SKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG--NLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERI 538 (955)
Q Consensus 461 ~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~--~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L 538 (955)
++|++|++ ++|++++ .+|.. +. +++.|++.|.+|.. +++|+.|
T Consensus 357 ~~L~~L~L-------------------------~~N~l~~l~~ip~~-----l~--~L~~n~~~~~i~~~---~~~L~~L 401 (454)
T 1jl5_A 357 QNLKQLHV-------------------------EYNPLREFPDIPES-----VE--DLRMNSHLAEVPEL---PQNLKQL 401 (454)
T ss_dssp TTCCEEEC-------------------------CSSCCSSCCCCCTT-----CC--EEECCC------------------
T ss_pred hhccEEEC-------------------------CCCCCCcCCCChHH-----HH--hhhhcccccccccc---cCcCCEE
Confidence 44444544 4445544 33321 11 23456677777763 5788999
Q ss_pred eeccccccc--cchhhhcCCCCCcEEECCCCCCccccCCCcCC
Q 002186 539 DLANNKLIG--SIPEVLARLPVLGVLDLSHNSLSGQIPAKFGS 579 (955)
Q Consensus 539 ~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 579 (955)
|+++|++++ .+|. .++.|.+.+|.+.+.+|.....
T Consensus 402 ~ls~N~l~~~~~iP~------sl~~L~~~~~~~~~~~~~~~~~ 438 (454)
T 1jl5_A 402 HVETNPLREFPDIPE------SVEDLRMNSERVVDPYEFAHET 438 (454)
T ss_dssp -------------------------------------------
T ss_pred ECCCCcCCccccchh------hHhheeCcCcccCCccccCHHH
Confidence 999999987 6664 3566788899988877765443
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.4e-41 Score=389.23 Aligned_cols=364 Identities=19% Similarity=0.160 Sum_probs=255.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC-CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF-PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
++|++|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|..+++|++|||++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 57999999999999999999999999999999999998655 56799999999999999999998899999999999999
Q ss_pred ecCCCCcccCCCC--cCCCCCCcEEEccCCCCCCCCchh-ccCCCCCcEEecccccccCCCCccccCC--CCCcEEeccC
Q 002186 180 LAGSYFSGPIPSQ--FGSFKSLEFLHLAGNLLNDQIPAE-LGMLKTVTHMEIGYNFYQGNIPWQLGNM--SEVQYLDIAG 254 (955)
Q Consensus 180 Ls~n~l~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~l~~n~l~g~~p~~~~~l--~~L~~L~Ls~ 254 (955)
|++|.+++.+|.. |+++++|++|+|++|.+++..|.. +..+++|++|++++|.+.+..|..+.++ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999999866554 999999999999999999888876 8899999999999999998888888776 6889999999
Q ss_pred CCCCCCCCccc--------cCCCCCCEEEeccccccccCCccCcCC---CccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 255 ANLSGSIPKEL--------SNLTKLESLFLFRNQLAGQVPWEFSRV---TTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 255 n~l~~~~p~~l--------~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+....
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~------------ 257 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG------------ 257 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc------------
Confidence 99887555432 356788888888888887777655443 7788888888766542110
Q ss_pred cccccCCCCCccccC--CCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCC
Q 002186 324 LMYNEMSGTVPESLV--QLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNF 401 (955)
Q Consensus 324 Ls~N~l~~~~p~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l 401 (955)
.+.+.+..+..+. ..++|+.|++++|.+++.+|..++.+++|+.|++++|.+.+..|..+..+..|+.|++++|.+
T Consensus 258 --~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 258 --HTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp --CCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred --hhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 0111111111111 123444555555555444444444455555555555555444444444444555555555555
Q ss_pred CCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCC
Q 002186 402 TGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIP 479 (955)
Q Consensus 402 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p 479 (955)
.+..|..+.++++|++|+|++|++++..|..|..+++|++|++++|++++..+..+..+++|++|++++| .+.+.+|
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~ 412 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN-PWDCSCP 412 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS-CBCCCTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC-CcccCCC
Confidence 4444555555566666666666665555555666666666666666665544444555556666666666 3334333
No 44
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=380.62 Aligned_cols=251 Identities=19% Similarity=0.223 Sum_probs=191.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc------CC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RH 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~ 759 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+
T Consensus 55 ~Y~--~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 55 EYE--IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CeE--EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 455 788999999999999984 689999999997532 234567889999999999999999999864 35
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|||||||+ |+|.+++.. .+++.+...|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 7899999996 789999975 568888899999999999999999 9999999999999999999999999999764
Q ss_pred cccC------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-------------
Q 002186 838 QLAD------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------- 897 (955)
Q Consensus 838 ~~~~------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~------------- 897 (955)
.... .....++++|++||+..+. .++.++||||+|||+|||+||+.||.+..........
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 3221 1123477889999987764 5689999999999999999999999753321100000
Q ss_pred ----ccccccccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 898 ----GLLGEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 898 ----~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..........+........ ....++.+++.+||..||++|||++|++++
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000000000000000111 123567899999999999999999999864
No 45
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.5e-41 Score=375.62 Aligned_cols=196 Identities=14% Similarity=0.153 Sum_probs=165.8
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCee
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~ 761 (955)
+.+.|. ..+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++|+++ +|||||++++++.+++..
T Consensus 19 l~~~Y~--i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFK--IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCE--EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEE--EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 344566 788999999999999973 467899999986543 344577899999988 699999999999999999
Q ss_pred EEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECccccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~~ 840 (955)
|+|||||++|+|.++++ .+++.+...++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.....
T Consensus 96 ~lvmE~~~g~~L~~~~~-~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILN-SLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEEEECCCCCCHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEEEeCCCcccHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999999985 488888999999999999999999 99999999999999876 79999999999754321
Q ss_pred C------------------------------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCC
Q 002186 841 D------------------------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGS 889 (955)
Q Consensus 841 ~------------------------------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~ 889 (955)
. .....++++|++||+..+. .++.++||||+|||+|||+||+.||..+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~ 251 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence 1 0112367889999988664 58899999999999999999999997554
No 46
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.4e-40 Score=381.47 Aligned_cols=366 Identities=18% Similarity=0.160 Sum_probs=302.1
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCC-chhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEE
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSV-PAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLH 203 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~-p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 203 (955)
++|++|||++|.+++..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999999999999999999999999998665 56799999999999999999998899999999999999
Q ss_pred ccCCCCCCCCchh--ccCCCCCcEEecccccccCCCCcc-ccCCCCCcEEeccCCCCCCCCCccccCC--CCCCEEEecc
Q 002186 204 LAGNLLNDQIPAE--LGMLKTVTHMEIGYNFYQGNIPWQ-LGNMSEVQYLDIAGANLSGSIPKELSNL--TKLESLFLFR 278 (955)
Q Consensus 204 L~~N~l~~~~p~~--l~~l~~L~~L~l~~n~l~g~~p~~-~~~l~~L~~L~Ls~n~l~~~~p~~l~~l--~~L~~L~L~~ 278 (955)
|++|.+++.+|.. +..+++|++|++++|.+.+..|.. +.++++|++|++++|.+++..|..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9999998866665 888888888888888888777765 7788888888888888887777777665 5677777777
Q ss_pred ccccccCCccC--------cCCCccCEEEccCCCCCCCCCcccCCC---CCCcEEecccccCCCCCccccCCCCCccEEE
Q 002186 279 NQLAGQVPWEF--------SRVTTLKSLDLSDNRLSGPIPESFADL---KNLRLLSLMYNEMSGTVPESLVQLPSLEILF 347 (955)
Q Consensus 279 N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~ 347 (955)
|.+.+..+..+ ..+++|++|++++|++++..|..+..+ ++|+.|++++|.+.+...
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~------------- 256 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSF------------- 256 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCT-------------
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeecccccccccc-------------
Confidence 77776554332 245667777777777776666555443 666677776666554311
Q ss_pred ccCCcCcccCCcccC--CCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCcc
Q 002186 348 IWNNYFSGSLPENLG--RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSF 425 (955)
Q Consensus 348 L~~N~l~~~~p~~~~--~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 425 (955)
..+.+.+..+..+. ..++|+.|++++|.+.+.+|..+..+.+|+.|++++|.+.+..|..+.++++|++|+|++|++
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 335 (455)
T 3v47_A 257 -GHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335 (455)
T ss_dssp -TCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred -chhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCcc
Confidence 11122222222222 236899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCC
Q 002186 426 SGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPF 505 (955)
Q Consensus 426 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~ 505 (955)
++..|..|..+++|++|+|++|++++..|..+..+++|++|++++| .+.+..+..+..+++|+.|++++|.+++..|..
T Consensus 336 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN-QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS-CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred CCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC-ccccCCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 9988999999999999999999999998999999999999999999 677666666788999999999999999988753
No 47
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.6e-39 Score=375.03 Aligned_cols=360 Identities=17% Similarity=0.179 Sum_probs=187.5
Q ss_pred CCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCC
Q 002186 117 FPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l 196 (955)
.+..++++++|++|++++|.+++. | .|+.+++|++|+|++|.+++. | ++++++|++|+|++|.+++. | |+++
T Consensus 34 ~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 34 DTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp SEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 334455555555555555555542 3 355555555555555555542 2 45555555555555555542 2 5555
Q ss_pred CCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEe
Q 002186 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFL 276 (955)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 276 (955)
++|++|++++|++++ +| ++.+++|++|++++|.+++. + ++++++|++|++++|...+.+ .+..+++|++|++
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 555555555555544 22 44444444444444444431 1 444555555555555443333 2444555555555
Q ss_pred ccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCccc
Q 002186 277 FRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGS 356 (955)
Q Consensus 277 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 356 (955)
++|++++. | +..+++|+.|++++|++++. .++.+++|+.|++++|++++ +| +..+++|+.|++++|++++.
T Consensus 178 s~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 178 SFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCc
Confidence 55555542 2 44555555555555555543 24455555555555555554 23 44445555555555554442
Q ss_pred CCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCC
Q 002186 357 LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQL 436 (955)
Q Consensus 357 ~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 436 (955)
. ++.+++|+.|++++| +|+.|++++|++.+.+| ++.+
T Consensus 249 ~---~~~l~~L~~L~l~~n--------------------------------------~L~~L~l~~n~~~~~~~--~~~l 285 (457)
T 3bz5_A 249 D---VSTLSKLTTLHCIQT--------------------------------------DLLEIDLTHNTQLIYFQ--AEGC 285 (457)
T ss_dssp C---CTTCTTCCEEECTTC--------------------------------------CCSCCCCTTCTTCCEEE--CTTC
T ss_pred C---HHHCCCCCEEeccCC--------------------------------------CCCEEECCCCccCCccc--cccc
Confidence 2 223333444443332 23334444444444444 3344
Q ss_pred CCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEec
Q 002186 437 PDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIES 516 (955)
Q Consensus 437 ~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l 516 (955)
++|+.|++++|.+.+.+|. ...+|+.|++++| ++|+.|++
T Consensus 286 ~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------------------------------~~L~~L~L 325 (457)
T 3bz5_A 286 RKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------------------------------PKLVYLYL 325 (457)
T ss_dssp TTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------------------------------TTCCEEEC
T ss_pred ccCCEEECCCCcccceecc---CCCcceEechhhc-------------------------------------ccCCEEEC
Confidence 5555555555555444442 2233444444443 24555666
Q ss_pred cccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceec
Q 002186 517 HMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGS 596 (955)
Q Consensus 517 ~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ 596 (955)
+.|++++. + ++++++|+.||+++|++++ ++.|+.|++++|.++|. ..+.+|+.+++++|+++|.
T Consensus 326 ~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ 389 (457)
T 3bz5_A 326 NNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIA 389 (457)
T ss_dssp TTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEE
T ss_pred CCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEE
Confidence 66666663 2 6677777777777777775 24566677777877776 2455677778888888888
Q ss_pred cCCc
Q 002186 597 IPSG 600 (955)
Q Consensus 597 ip~~ 600 (955)
||..
T Consensus 390 ip~~ 393 (457)
T 3bz5_A 390 VSPD 393 (457)
T ss_dssp CCTT
T ss_pred cChh
Confidence 8754
No 48
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.2e-41 Score=389.77 Aligned_cols=244 Identities=11% Similarity=0.066 Sum_probs=193.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHH---HHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIV---SEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~---~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||++++... ..... .+++++++.++|||||++++++++++..
T Consensus 190 df~--i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 190 DFS--VHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred HeE--EEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 366 888999999999999984 5899999999975321 12222 3446677888999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
|||||||+||+|.++|.+ .++......|+.||+.||+|||+. +||||||||+|||+|.++.+||+|||+|+....
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999976 567888889999999999999999 999999999999999999999999999987655
Q ss_pred cCCCCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 840 ADGSFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.......++++|++||+.. +..++.++||||+||++|||+||+.||.+...... ........... ...+. ..
T Consensus 345 ~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~~~~-~~~p~---~~ 417 (689)
T 3v5w_A 345 KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTLTMA-VELPD---SF 417 (689)
T ss_dssp CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHHHCC-CCCCT---TS
T ss_pred CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhcCCC-CCCCc---cC
Confidence 4444456788899999985 46789999999999999999999999974322111 01111111111 11111 22
Q ss_pred HHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
..++.+++.+||+.||++|++ ++||.+
T Consensus 418 S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 418 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 345778999999999999998 678765
No 49
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6e-41 Score=395.39 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=201.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+.+.|. ..+.||+|+||+||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+++..||
T Consensus 154 ~il~~Y~--i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~i 231 (573)
T 3uto_A 154 HVLDHYD--IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVM 231 (573)
T ss_dssp CGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEE
T ss_pred cCccccE--EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence 3455676 788999999999999984 689999999997643 345678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC--CCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN--MEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~--~~~ki~DfGl~~~~~ 838 (955)
|||||++|+|.++|.. .+++.+...++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+++...
T Consensus 232 v~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp EEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred EEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999999964 457888899999999999999999 99999999999999854 789999999998764
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..... ...++++|++||+..+..++.++||||+||++|||++|+.||.+..... .+..+..............
T Consensus 309 ~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~~ 382 (573)
T 3uto_A 309 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE------TLRNVKSCDWNMDDSAFSG 382 (573)
T ss_dssp TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHTTCCCCCSGGGTT
T ss_pred CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH------HHHHHHhCCCCCCcccccC
Confidence 33221 2236778999999999999999999999999999999999997543211 1111111110000111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.+++.+||+.||++|||++|++++
T Consensus 383 ~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 383 ISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 34567789999999999999999999874
No 50
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.5e-38 Score=366.85 Aligned_cols=309 Identities=20% Similarity=0.216 Sum_probs=246.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|++|||++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|++++|.+++. | ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 78899999999999975 5 799999999999999999975 4 89999999999999999974 4 89999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++ +| ++++++|++|++++|++++. + ++.+++|+.|++++|...+.+ .++.+++|++|++++|++++
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 99999997 44 89999999999999999884 3 889999999999999777777 47889999999999999997
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+| +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +| ++.+++|+.|++++|++++.. +..
T Consensus 185 -l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~ 252 (457)
T 3bz5_A 185 -LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VST 252 (457)
T ss_dssp -CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTT
T ss_pred -ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHH
Confidence 45 88899999999999999976 48899999999999999998 55 889999999999999999864 456
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|+++.|. |+.|++++|.+.|.+|. ..+..|+.|++++|.+.+.+|. ..++|+.|+
T Consensus 253 l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~~--~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~ 313 (457)
T 3bz5_A 253 LSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQA--EGCRKIKELDVTHNTQLYLLDC---QAAGITELD 313 (457)
T ss_dssp CTTCCEEECTTCC--------------CSCCCCTTCTTCCEEEC--TTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCC
T ss_pred CCCCCEEeccCCC--------------CCEEECCCCccCCcccc--cccccCCEEECCCCcccceecc---CCCcceEec
Confidence 6778888877653 45677777777776662 3445666666666666555553 223344444
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++| ++|++|++++|++++. + +..+++|+.|++++|
T Consensus 314 l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N 349 (457)
T 3bz5_A 314 LSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNA 349 (457)
T ss_dssp CTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSS
T ss_pred hhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCC
Confidence 4333 4566666666666652 2 555555666666655
No 51
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5.1e-39 Score=354.92 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=208.2
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.|. ..+.||+|+||.||+|+..+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+..++||
T Consensus 37 ~~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (321)
T 2qkw_B 37 ATNNFD--HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114 (321)
T ss_dssp CCCCCS--CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred HHhccC--ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 345566 788999999999999999899999999987543 34667889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||+++|+|.+++.. ..+|.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 191 (321)
T 2qkw_B 115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTE 191 (321)
T ss_dssp ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999965 368999999999999999999998 999999999999999999999999999875432
Q ss_pred cCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc---------ccccccccc
Q 002186 840 ADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID---------GLLGEMYNE 906 (955)
Q Consensus 840 ~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~---------~~~~~~~~~ 906 (955)
.... ...++..|.+||......++.++|||||||++|||+||+.||............ .......++
T Consensus 192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (321)
T 2qkw_B 192 LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDP 271 (321)
T ss_dssp SSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSS
T ss_pred ccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcCh
Confidence 2111 122456688999988888999999999999999999999998754332111100 111222222
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
... .....+....+.+++.+||+.||++|||++|++++|+.+
T Consensus 272 ~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 313 (321)
T 2qkw_B 272 NLA--DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313 (321)
T ss_dssp SCT--TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhc--cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 211 122356678899999999999999999999999999865
No 52
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.1e-39 Score=357.51 Aligned_cols=259 Identities=30% Similarity=0.511 Sum_probs=207.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|...+|+.||||++..... ....+.+|++++++++|||||+++++|.+++..++|||
T Consensus 30 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 107 (326)
T 3uim_A 30 DNFS--NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107 (326)
T ss_dssp TSSC--STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred hccc--cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence 4466 8899999999999999988999999999975332 23368899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+++|+|.++++. ..+|..+..++.|+++||+|||+.+.++|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 108 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred eccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 9999999999975 2689999999999999999999998889999999999999999999999999999765432
Q ss_pred CCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC-----CCCC--Cccc----cccccccccc
Q 002186 841 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG-----SSLQ--NKPI----DGLLGEMYNE 906 (955)
Q Consensus 841 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~-----~~~~--~~~~----~~~~~~~~~~ 906 (955)
... ...++..|.+||......++.++||||+||++|||+||+.||... .... .+.. ........+.
T Consensus 188 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (326)
T 3uim_A 188 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV 267 (326)
T ss_dssp SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCT
T ss_pred cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcCh
Confidence 221 112456688999988888999999999999999999999998611 1000 0000 0111112221
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.. ......+....+.+++.+||+.||++|||++||+++|++..
T Consensus 268 ~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 268 DL--QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TC--TTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hh--ccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 11 12233567788999999999999999999999999998654
No 53
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=3e-39 Score=356.64 Aligned_cols=257 Identities=18% Similarity=0.255 Sum_probs=198.8
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC----eeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----QAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+.. |+.||||+++..........+|+.++++++|||||++++++.... ..++||||+++
T Consensus 28 ~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~ 106 (322)
T 3soc_A 28 LLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEK 106 (322)
T ss_dssp EEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred hhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCC
Confidence 7889999999999999874 899999999766555556677899999999999999999998744 47999999999
Q ss_pred CChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcC-------CCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 771 GNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHD-------CYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 771 gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~-------~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|+|.++++. ..+|..+..++.|+++||+|||+. +.++|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~ 186 (322)
T 3soc_A 107 GSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186 (322)
T ss_dssp CBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC
T ss_pred CCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC
Confidence 999999976 568999999999999999999976 245899999999999999999999999999976543221
Q ss_pred C----CcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccc----------ccccc
Q 002186 843 S----FPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG----------LLGEM 903 (955)
Q Consensus 843 ~----~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~----------~~~~~ 903 (955)
. ...++..|.+||...+ ..++.++|||||||++|||+||+.||............. .....
T Consensus 187 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (322)
T 3soc_A 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVV 266 (322)
T ss_dssp CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHH
T ss_pred ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhh
Confidence 1 1234566888998765 356678899999999999999999987543321111110 00000
Q ss_pred ccccccCC-CC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 904 YNENEVGS-SS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 904 ~~~~~~~~-~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
......+. .. .......++.+++.+||+.||++|||++||++.|+.++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 267 VHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp TTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 01100000 11 112345668899999999999999999999999988753
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=350.03 Aligned_cols=249 Identities=18% Similarity=0.268 Sum_probs=199.1
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc-cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG-ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~-~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
|. ..+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 12 ~~--~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 12 LI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp EE--EEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ee--ccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 55 778999999999999995 57999999998653 334667899999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 99999999975 568999999999999999999999 9999999999999999999999999998754322111
Q ss_pred --------------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 844 --------------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 844 --------------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
...++..|.+||...+..++.++|||||||++|||++|..|+.......... ........+.. .
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~-~~~~~~~~~~~-~ 244 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF-GLNVRGFLDRY-C 244 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS-SBCHHHHHHHT-C
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH-hhhhhcccccc-C
Confidence 1224566889999988889999999999999999999998876432211110 00111111111 0
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+ .....+.+++.+||+.||++|||++|+++.|+.++
T Consensus 245 --~~---~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 245 --PP---NCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp --CT---TCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 01 11234678889999999999999999999998764
No 55
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-38 Score=348.07 Aligned_cols=247 Identities=16% Similarity=0.228 Sum_probs=198.6
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.+.|. ..+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|+.++++++|||||++++++...+..++||
T Consensus 19 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 19 KKKYT--RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGTBC--CCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhcee--eeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 34566 788999999999999984 689999999997543 34567889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 766 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 97 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 173 (297)
T 3fxz_A 97 EYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173 (297)
T ss_dssp ECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB
T ss_pred ECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc
Confidence 99999999999976 468888999999999999999999 9999999999999999999999999998765433221
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++..|.+||......++.++||||+||++|||+||+.||........ ........ .............+
T Consensus 174 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~ 246 (297)
T 3fxz_A 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA------LYLIATNG-TPELQNPEKLSAIF 246 (297)
T ss_dssp CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH------HHHHHHHC-SCCCSCGGGSCHHH
T ss_pred CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHHhCC-CCCCCCccccCHHH
Confidence 22356668899999888899999999999999999999999864322110 00000000 00011112233557
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 247 ~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 247 RDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHccCChhHCcCHHHHhhC
Confidence 789999999999999999999863
No 56
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=8.8e-39 Score=343.33 Aligned_cols=249 Identities=17% Similarity=0.252 Sum_probs=201.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++.+++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (268)
T 3sxs_A 12 LLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLL 91 (268)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHH
Confidence 77899999999999999988989999999876666778899999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---Ccccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---~~~~~ 848 (955)
+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ .....
T Consensus 92 ~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~ 168 (268)
T 3sxs_A 92 NYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP 168 (268)
T ss_dssp HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCC
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcC
Confidence 99975 478999999999999999999999 9999999999999999999999999998754332211 11123
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++||||+||++|||+| |+.||....... .............+.. ....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~---~~~~l~~li~ 239 (268)
T 3sxs_A 169 VKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGHRLYRPHL---ASDTIYQIMY 239 (268)
T ss_dssp GGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH------HHHHHHTTCCCCCCTT---SCHHHHHHHH
T ss_pred cccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH------HHHHHHcCCCCCCCCc---ChHHHHHHHH
Confidence 34788999888888999999999999999999 888875322110 0011111110100111 1245778899
Q ss_pred HccCCCCCCCCCHHHHHHHhhccCCCCC
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGLKPHGK 955 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~~~~~~ 955 (955)
.||+.||++|||++|+++.|+.+++..|
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 240 SCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp HTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred HHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 9999999999999999999999987654
No 57
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.7e-38 Score=357.18 Aligned_cols=247 Identities=21% Similarity=0.264 Sum_probs=196.1
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
.|. ..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|+++++++ +|||||+++++|.++
T Consensus 82 ~~~--~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 82 KLT--LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GEE--EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HCE--eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 355 778899999999999974 3567899999976432 356788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..|+||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 9999999999999999999752 57888999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++........ ...++..|.+||+..+..++.++|||||||++|||+| |+.||..... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-~--- 312 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-E--- 312 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-G---
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-H---
Confidence 99999999999998754332211 1113345889999888889999999999999999999 8888764221 1
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+...... .........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 313 --~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 313 --ELFKLLKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp --GHHHHHHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 111111111001 01112234577899999999999999999999999875
No 58
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-38 Score=342.96 Aligned_cols=247 Identities=20% Similarity=0.266 Sum_probs=200.4
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...+++.||||++.......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 93 (269)
T 4hcu_A 14 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS 93 (269)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHH
T ss_pred eeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHH
Confidence 77889999999999999888999999999876666778999999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCcccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~~ 848 (955)
+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+.
T Consensus 94 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~ 170 (269)
T 4hcu_A 94 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 170 (269)
T ss_dssp HHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccc
Confidence 99965 368889999999999999999999 99999999999999999999999999987543221 1111123
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++||||+||++|||+| |+.||...... .....+........+. .....+.+++.
T Consensus 171 ~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~~~~li~ 241 (269)
T 4hcu_A 171 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYKPR---LASTHVYQIMN 241 (269)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred cccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHHHHhcCccCCCCC---cCCHHHHHHHH
Confidence 45788999988889999999999999999999 78777632211 1111111110011011 12345778899
Q ss_pred HccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
+||+.||++|||++|++++|+++...
T Consensus 242 ~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 242 HCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999987654
No 59
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.9e-38 Score=346.94 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=189.8
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHh--ccCCCCceeEeEEEEc----CCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYN----RHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~----~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. +|+.||||++.... .+.+.+|.+++. +++|||||++++++.. .+..+
T Consensus 8 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 8 RDIT--LLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGCE--EEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred CcEE--EEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 3465 788999999999999987 79999999997543 333444555544 4899999999999764 34689
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH--------~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
+||||+++|+|.++++. ..++..+..++.|+++||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 99999999999999975 5689999999999999999999 66 999999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhC----------CCCCCCCCCC
Q 002186 834 KYLTQLADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSL 891 (955)
Q Consensus 834 ~~~~~~~~~~------~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg----------~~p~~~~~~~ 891 (955)
++........ ...++..|.+||..... .++.++|||||||++|||+|| +.||......
T Consensus 160 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~ 239 (301)
T 3q4u_A 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPN 239 (301)
T ss_dssp CEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred eeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCC
Confidence 8754332211 12355668889988765 455789999999999999999 6666532221
Q ss_pred CCccccccccccc--cccccCCCC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 892 QNKPIDGLLGEMY--NENEVGSSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 892 ~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.... . ...... .......+. ........+.+++.+||+.||++|||++||++.|+++
T Consensus 240 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 240 DPSF-E-DMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCCH-H-HHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred Ccch-h-hhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 1100 0 000000 000000011 1234567788999999999999999999999999876
No 60
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.1e-38 Score=349.63 Aligned_cols=244 Identities=20% Similarity=0.255 Sum_probs=190.7
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||+||+|+. +|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 41 i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 119 (309)
T 3p86_A 41 IKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRG 119 (309)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTC
T ss_pred eeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCC
Confidence 778999999999999986 68899999997543 23457889999999999999999999999999999999999999
Q ss_pred ChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 772 NLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 772 sL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
+|.+++... .++.++..++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++.......
T Consensus 120 ~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~ 196 (309)
T 3p86_A 120 SLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS 196 (309)
T ss_dssp BHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred cHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccccc
Confidence 999999763 68888999999999999999998 6 99999999999999999999999999875433211
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccc-cccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY-NENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 921 (955)
....++..|.+||......++.++|||||||++|||+||+.||....... ...... .......+ ......
T Consensus 197 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~ 267 (309)
T 3p86_A 197 KSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ------VVAAVGFKCKRLEIP---RNLNPQ 267 (309)
T ss_dssp -----CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH------HHHHHHHSCCCCCCC---TTSCHH
T ss_pred ccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhcCCCCCCC---ccCCHH
Confidence 12235566889999988889999999999999999999999986432110 000000 00001011 122345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 268 l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 268 VAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 778999999999999999999999998663
No 61
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=351.67 Aligned_cols=247 Identities=17% Similarity=0.188 Sum_probs=198.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||+|.++......+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 5 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 5 EKYM--IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hceE--eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 4455 778899999999999985 4789999999986655667788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--CCCceECcccccccccccCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~~~~~~ 842 (955)
|++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999999975 468889999999999999999999 9999999999999997 78999999999876543221
Q ss_pred C-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 S-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
. ...++++|.+||......++.++||||+||++|||+||+.||...... .....+.................+
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ------QIIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH------HHHHHHHcCCCCCChhhhccCCHH
Confidence 1 122556788999988878899999999999999999999998743211 111111111100000011123456
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++.+||+.||++|||++|++++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHcCCChhHCcCHHHHhcC
Confidence 7899999999999999999999873
No 62
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=352.10 Aligned_cols=247 Identities=16% Similarity=0.214 Sum_probs=192.3
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+++.+.|. ..+.||+|+||+||+|+ ..+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..
T Consensus 6 ~~l~~~y~--i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~ 83 (347)
T 3zgw_A 6 DELLKYYE--LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKI 83 (347)
T ss_dssp TTTTTTEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHhcCeE--EEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 34455666 88899999999999998 46899999999975432 244678999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
++|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 84 ~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 999999999999999964 578899999999999999999999 999999999999999999999999999875433
Q ss_pred cCC---CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 840 ADG---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 840 ~~~---~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
... ....+++.|.+||...+..+ +.++||||+||++|||+||+.||...... .....+.... ...+.
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~-- 231 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------ALYKKIMRGK-YDVPK-- 231 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT--
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCC-CCCCC--
Confidence 221 12235667889998877664 88999999999999999999998743211 1111111111 10011
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+++.+||+.||++|||++|++++
T Consensus 232 -~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 232 -WLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -TCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -CCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 122456688999999999999999999863
No 63
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.8e-38 Score=348.75 Aligned_cols=242 Identities=17% Similarity=0.209 Sum_probs=194.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..|+||
T Consensus 16 ~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 16 NYR--LLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 455 788999999999999995 689999999997543 23456789999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 170 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL 170 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence 99999999999864 568888899999999999999999 999999999999999999999999999876543221
Q ss_pred CCcccccccCchhhhhccCCc-ccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEE-MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~-~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
....++++|.+||...+..+. .++||||+||++|||+||+.||...... .....+.... ...+. .....
T Consensus 171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~ 240 (328)
T 3fe3_A 171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK------ELRERVLRGK-YRIPF---YMSTD 240 (328)
T ss_dssp GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCHH
T ss_pred ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CCCHH
Confidence 122356678899998877654 7899999999999999999998743211 1111111111 10011 12245
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 241 CENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HHHHHHHHCCCChhHCcCHHHHhcC
Confidence 6788999999999999999999864
No 64
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=4.4e-38 Score=351.39 Aligned_cols=250 Identities=18% Similarity=0.161 Sum_probs=198.9
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
.++.+.|. ..+.||+|+||.||+|+. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.
T Consensus 8 ~~~~~~y~--~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 85 (361)
T 2yab_A 8 QKVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYE 85 (361)
T ss_dssp SCGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CChhhceE--EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 34445566 788999999999999985 5799999999975322 2467889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 830 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~D 830 (955)
+.+..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 99999999999999999999975 467888999999999999999999 999999999999998776 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 831 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 831 fGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
||+++....... ....+++.|.+||+.....++.++||||+||++|||++|..||...... .....+......
T Consensus 163 FG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~~i~~~~~~ 236 (361)
T 2yab_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITAVSYD 236 (361)
T ss_dssp CSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTCCC
T ss_pred cCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCC
Confidence 999976543322 2223667789999998888999999999999999999999999743211 111111111100
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+......+.+++.+||..||++|||++|+++
T Consensus 237 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 000011122355778999999999999999999985
No 65
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2e-38 Score=356.72 Aligned_cols=247 Identities=19% Similarity=0.277 Sum_probs=188.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|++++++++|||||+++|+|.+.+..++
T Consensus 46 ~~~--~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 46 NIS--IDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GCC--CCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred hce--eeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 355 7889999999999999864 67889999997542 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 9999999999999976 468999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCC---c--ccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 841 DGSF---P--AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 841 ~~~~---~--~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
.... . .....|.+||+.....++.++|||||||++|||+| |+.||...... .....+.........
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~~~~~i~~~~~~~~~-- 272 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------DVIKAVDEGYRLPPP-- 272 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------HHHHHHHTTEECCCC--
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC--
Confidence 2111 1 12234788999988889999999999999999998 88888643211 011111110001001
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......+.+++.+||+.||++||+|+||+++|+.+
T Consensus 273 -~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 273 -MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp -TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 12235677899999999999999999999999865
No 66
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2.5e-38 Score=365.99 Aligned_cols=245 Identities=17% Similarity=0.267 Sum_probs=198.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++|||||++++++. .+..++|||||++|+|.
T Consensus 192 ~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~ 270 (454)
T 1qcf_A 192 LEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLL 270 (454)
T ss_dssp EEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHH
T ss_pred EEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHH
Confidence 67889999999999999988999999999876666788999999999999999999999986 56789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~ 847 (955)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 347 (454)
T 1qcf_A 271 DFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKF 347 (454)
T ss_dssp HHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSS
T ss_pred HHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcc
Confidence 99975 568888999999999999999999 99999999999999999999999999997653211 111112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||+| |+.||...... .....+........+ ......+.+++
T Consensus 348 ~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~l~~li 418 (454)
T 1qcf_A 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------EVIRALERGYRMPRP---ENCPEELYNIM 418 (454)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHHHTCCCCCC---TTSCHHHHHHH
T ss_pred cccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHHHHHHH
Confidence 334788899888889999999999999999999 88888642211 011111111001111 12335677899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.+||+.||++||||++|++.|+.+..
T Consensus 419 ~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 419 MRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred HHHccCChhHCcCHHHHHHHHHHHHh
Confidence 99999999999999999999998743
No 67
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=7.1e-38 Score=345.28 Aligned_cols=242 Identities=15% Similarity=0.222 Sum_probs=195.5
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
..+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++|||||+++++|...+..++||||+++|+
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 5568999999999999965 89999999997543 345678899999999999999999999999999999999999999
Q ss_pred hhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCccccc
Q 002186 773 LSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPAKIA 849 (955)
Q Consensus 773 L~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~ 849 (955)
|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++.
T Consensus 129 L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~ 205 (321)
T 2c30_A 129 LTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTP 205 (321)
T ss_dssp HHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCG
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCc
Confidence 9999876 578999999999999999999998 999999999999999999999999999876543221 1223556
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHc
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLC 929 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C 929 (955)
.|.+||+.....++.++|||||||++|||+||+.||....... ....+.... .............+.+++.+|
T Consensus 206 ~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~ 278 (321)
T 2c30_A 206 YWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQ------AMKRLRDSP-PPKLKNSHKVSPVLRDFLERM 278 (321)
T ss_dssp GGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSS-CCCCTTGGGSCHHHHHHHHHH
T ss_pred cccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhcCC-CCCcCccccCCHHHHHHHHHH
Confidence 6889999988889999999999999999999999987432111 011111110 000111112234577888999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 002186 930 TRSTPSDRPSMEEALKL 946 (955)
Q Consensus 930 l~~dp~~RPt~~ev~~~ 946 (955)
|+.||++|||++|+++.
T Consensus 279 l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 279 LVRDPQERATAQELLDH 295 (321)
T ss_dssp SCSSTTTSCCHHHHHTS
T ss_pred ccCChhhCcCHHHHhcC
Confidence 99999999999999874
No 68
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=349.44 Aligned_cols=244 Identities=19% Similarity=0.262 Sum_probs=194.2
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|... .+..||||+++... ...+.+.+|++++++++|||||+++++|.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 7789999999999999963 45569999997632 33567889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 133 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 209 (325)
T 3kul_A 133 ENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209 (325)
T ss_dssp TTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCE
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccCcccee
Confidence 99999999964 568999999999999999999999 99999999999999999999999999987654322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...+..|.+||...+..++.++|||||||++|||+| |+.||...... .....+......... ....
T Consensus 210 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~~~~~~~~~~~~~---~~~~ 280 (325)
T 3kul_A 210 TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVISSVEEGYRLPAP---MGCP 280 (325)
T ss_dssp ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHHHHHHTTCCCCCC---TTCC
T ss_pred eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHcCCCCCCC---CCcC
Confidence 112335788999888889999999999999999999 88888643211 011111111101111 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++..||+.||++|||++||++.|+.+
T Consensus 281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 4677899999999999999999999999876
No 69
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.8e-38 Score=358.31 Aligned_cols=246 Identities=18% Similarity=0.222 Sum_probs=195.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|+.. +|+.||||.++.... ..+.+.+|++++++++|||||+++|+|.+++..++|||||++|
T Consensus 118 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 197 (377)
T 3cbl_A 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197 (377)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred EeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCC
Confidence 6788999999999999965 899999999875422 2346788999999999999999999999999999999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC----CCC
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD----GSF 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~----~~~ 844 (955)
+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 198 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~ 274 (377)
T 3cbl_A 198 DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGL 274 (377)
T ss_dssp BHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSC
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCC
Confidence 99999975 478999999999999999999999 99999999999999999999999999987533211 111
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
......|.+||......++.++|||||||++|||+| |+.|+....... ....+.. ......+. .....+.
T Consensus 275 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~---~~~~~~~---~~~~~~~~---~~~~~l~ 345 (377)
T 3cbl_A 275 RQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ---TREFVEK---GGRLPCPE---LCPDAVF 345 (377)
T ss_dssp CEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH---HHHHHHT---TCCCCCCT---TCCHHHH
T ss_pred CCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc---CCCCCCCC---CCCHHHH
Confidence 112344788898888889999999999999999999 887775422110 0001101 00011111 1234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+++.+||+.||++|||++|+++.|++++.
T Consensus 346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 88999999999999999999999988753
No 70
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=8.5e-38 Score=338.55 Aligned_cols=248 Identities=15% Similarity=0.184 Sum_probs=197.9
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.|. ..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++||||++++++|.+.+..++||||++
T Consensus 25 ~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 25 DLT--FLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GEE--EEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHH--hHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 355 778999999999999999889999999998766667788999999999999999999999999999999999999
Q ss_pred CCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CC
Q 002186 770 NGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GS 843 (955)
Q Consensus 770 ~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~ 843 (955)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 179 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV 179 (283)
T ss_dssp TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccccccccc
Confidence 9999999965 578999999999999999999999 99999999999999999999999999987543221 11
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+..|.+||......++.++||||+||++|||+| |+.||...... .....+.......... .....+
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~~~~~~~~~~~~~~---~~~~~l 250 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETAEHIAQGLRLYRPH---LASEKV 250 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHHHHTTCCCCCCT---TCCHHH
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHHHHHhcccCCCCCC---cCCHHH
Confidence 1112345788999888889999999999999999999 88887643211 0111111110000011 112457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+++.+||+.||++|||++|+++.|+++.
T Consensus 251 ~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 251 YTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 78899999999999999999999998763
No 71
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=344.27 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=199.0
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
.++.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++|||||++++++.
T Consensus 7 ~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 84 (326)
T 2y0a_A 7 ENVDDYYD--TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE 84 (326)
T ss_dssp SCHHHHEE--EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceE--eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 34555677 788999999999999995 5799999999975321 3567889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 830 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~D 830 (955)
+.+..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 99999999999999999999975 467888999999999999999999 999999999999999887 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 831 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 831 fGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
||+++....... ....+++.|.+||+.....++.++||||+||++|||+||+.||....... ....+......
T Consensus 162 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~~~~~~~~ 235 (326)
T 2y0a_A 162 FGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE------TLANVSAVNYE 235 (326)
T ss_dssp CTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHTCCC
T ss_pred CCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHHhcCCC
Confidence 999876543222 12235666889999988889999999999999999999999986432110 11111100000
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
............+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000011223457789999999999999999999873
No 72
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.6e-37 Score=354.20 Aligned_cols=251 Identities=17% Similarity=0.136 Sum_probs=197.9
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
..+.+.|. ..+.||+|+||+||+|. ..+|+.||+|++..... ..+.+.+|++++++++|||||++++++.+++.
T Consensus 7 ~~~~~~Y~--i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 84 (444)
T 3soa_A 7 TRFTEEYQ--LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGH 84 (444)
T ss_dssp CHHHHHEE--EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSE
T ss_pred ccccCCeE--EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCE
Confidence 44556677 88899999999999998 46899999999975432 34568899999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKY 835 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl~~ 835 (955)
.|+|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 85 ~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 85 HYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp EEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 9999999999999999875 467888899999999999999999 999999999999998 45789999999997
Q ss_pred cccccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 836 LTQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 836 ~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
........ ...++++|.+||+.....++.++||||+||++|||++|+.||...... .....+.........+
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~~ 235 (444)
T 3soa_A 162 EVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------RLYQQIKAGAYDFPSP 235 (444)
T ss_dssp CCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTCCCCCTT
T ss_pred EecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------HHHHHHHhCCCCCCcc
Confidence 65433221 223567789999998888999999999999999999999998643211 0111111111000111
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 236 EWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 112233567789999999999999999999873
No 73
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.1e-38 Score=366.80 Aligned_cols=247 Identities=21% Similarity=0.247 Sum_probs=199.2
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||.||+|+.. ++..||||.++......+.+.+|+++|++++|||||+++|+|.+.+..++|||||++|+|
T Consensus 224 ~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L 303 (495)
T 1opk_A 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303 (495)
T ss_dssp EEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred eeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCH
Confidence 6788999999999999965 589999999987666677899999999999999999999999999999999999999999
Q ss_pred hHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC---Ccc
Q 002186 774 SEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---FPA 846 (955)
Q Consensus 774 ~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---~~~ 846 (955)
.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........ ...
T Consensus 304 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~ 380 (495)
T 1opk_A 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 380 (495)
T ss_dssp HHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCC
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCc
Confidence 999974 367889999999999999999999 9999999999999999999999999999765322111 111
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
....|.+||......++.++|||||||++|||+| |+.|+....... . ...+..... ...+ ......+.++
T Consensus 381 ~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~--~-~~~~~~~~~---~~~~---~~~~~~l~~l 451 (495)
T 1opk_A 381 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ--V-YELLEKDYR---MERP---EGCPEKVYEL 451 (495)
T ss_dssp CCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG--H-HHHHHTTCC---CCCC---TTCCHHHHHH
T ss_pred CCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH--H-HHHHHcCCC---CCCC---CCCCHHHHHH
Confidence 2334788898888889999999999999999999 777776432111 0 011111110 1111 1223457788
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
+.+||+.||++||||+|+++.|+.+...
T Consensus 452 i~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 452 MRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred HHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 9999999999999999999999987543
No 74
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.6e-38 Score=343.65 Aligned_cols=255 Identities=17% Similarity=0.276 Sum_probs=194.7
Q ss_pred hcccchhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcC--Cee
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~ 761 (955)
.|. ..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|++++++++|||||+++++|... ...
T Consensus 11 ~~~--~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 11 HLK--FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GEE--EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred Hhh--hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 355 78899999999999997 3478999999997543 3356788999999999999999999999653 568
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 999999999999999965 378999999999999999999998 99999999999999999999999999987654
Q ss_pred ccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC---------CCCcccc-cccccc
Q 002186 839 LADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS---------LQNKPID-GLLGEM 903 (955)
Q Consensus 839 ~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~---------~~~~~~~-~~~~~~ 903 (955)
..... ...+...|.+||......++.++|||||||++|||+||..|+..... ....... ......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL 245 (295)
T ss_dssp ----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH
T ss_pred CCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHH
Confidence 32211 11234457888998888899999999999999999999988752110 0000000 000001
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
...... +.......++.+++.+||+.||++|||++|++++|+.++.
T Consensus 246 ~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 246 KNNGRL---PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp HTTCCC---CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hccCcC---CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 011101 1111233567789999999999999999999999987753
No 75
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-37 Score=340.61 Aligned_cols=261 Identities=18% Similarity=0.239 Sum_probs=196.6
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+.+.++|. ..+.||+|+||+||+|...+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..
T Consensus 17 q~l~~~y~--~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 17 QGLMEKYQ--KLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp ECSSCEEE--EEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred cchHhhhH--hhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 34445676 8899999999999999998899999999975322 246678999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||++ |+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 95 ~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 170 (311)
T 3niz_A 95 TLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFG 170 (311)
T ss_dssp EEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred EEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence 99999998 588888865 367888899999999999999999 99999999999999999999999999997654
Q ss_pred ccCCC--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccccccc----------
Q 002186 839 LADGS--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMY---------- 904 (955)
Q Consensus 839 ~~~~~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~---------- 904 (955)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||............ .......
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 250 (311)
T 3niz_A 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL 250 (311)
T ss_dssp SCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred CCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence 32211 1234566888998765 56899999999999999999999998743322110000 0000000
Q ss_pred ----ccc-ccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccC
Q 002186 905 ----NEN-EVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLK 951 (955)
Q Consensus 905 ----~~~-~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~ 951 (955)
+.. ........ +....++.+++.+||+.||++|||++|++++ ++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 000 00000000 1123467899999999999999999999973 45543
No 76
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=350.10 Aligned_cols=246 Identities=18% Similarity=0.155 Sum_probs=191.8
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
|.+...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+..++||||+
T Consensus 89 ~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~ 168 (373)
T 2x4f_A 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYV 168 (373)
T ss_dssp EEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred eeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCC
Confidence 4434567899999999999984 689999999997643 34667889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee--CCCCCceECcccccccccccCCC
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF--DENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl--~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+|||+++........
T Consensus 169 ~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~ 245 (373)
T 2x4f_A 169 DGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKL 245 (373)
T ss_dssp TTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBC
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcccc
Confidence 99999998864 478899999999999999999999 99999999999999 67788999999998765433221
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++..|.+||+.....++.++|||||||++|||+||+.||....... ....+....+.............+
T Consensus 246 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~ 319 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE------TLNNILACRWDLEDEEFQDISEEA 319 (373)
T ss_dssp CCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTCCCSCSGGGTTSCHHH
T ss_pred ccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHHhccCCCChhhhccCCHHH
Confidence 2235667889999988889999999999999999999999987432211 111111111010011112233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++|||++|+++
T Consensus 320 ~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 320 KEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHhc
Confidence 88999999999999999999987
No 77
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=9.1e-38 Score=360.62 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=194.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC-eeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-QAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-~~~lv~ey~~~gsL 773 (955)
..+.||+|+||.||+|... |+.||||+++... ..+.+.+|+++|++++|||||+++|+|.+.+ ..++|||||++|+|
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L 274 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSL 274 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBH
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcH
Confidence 6788999999999999874 8899999997543 4567889999999999999999999988765 78999999999999
Q ss_pred hHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCccccc
Q 002186 774 SEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIA 849 (955)
Q Consensus 774 ~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~ 849 (955)
.++++.. .++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ....
T Consensus 275 ~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~-~~~~ 350 (450)
T 1k9a_A 275 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-KLPV 350 (450)
T ss_dssp HHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC-------CCCT
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC-CCCc
Confidence 9999752 57888999999999999999999 99999999999999999999999999987543222111 2234
Q ss_pred ccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 850 WTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 850 ~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
.|.+||......++.++|||||||++|||+| |+.|+....... ....+........+ ......+.+++.+
T Consensus 351 ~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~------~~~~i~~~~~~~~p---~~~~~~l~~li~~ 421 (450)
T 1k9a_A 351 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD------VVPRVEKGYKMDAP---DGCPPAVYDVMKN 421 (450)
T ss_dssp TTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT------HHHHHHTTCCCCCC---TTCCHHHHHHHHH
T ss_pred ceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCC---CcCCHHHHHHHHH
Confidence 4788999988889999999999999999999 888886432211 11111111001111 1223567789999
Q ss_pred ccCCCCCCCCCHHHHHHHhhccCC
Q 002186 929 CTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
||+.||++|||++|+++.|+.+..
T Consensus 422 cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 422 CWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCChhHCcCHHHHHHHHHHHHH
Confidence 999999999999999999988754
No 78
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-37 Score=338.69 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=197.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
+|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++.+++++|||||++++++.+++..++|
T Consensus 12 ~y~--i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 12 RYK--IVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred cEE--EEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 455 788999999999999984 589999999985422 2346788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999999975 468999999999999999999999 999999999999999999999999999876543221
Q ss_pred C---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 843 S---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 843 ~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ...++..|.+||...+..++.++||||+||++|||+||+.||........ .............. ....+..
T Consensus 167 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~--~~~~~~~~~~~~~~---~~~~~~~ 241 (294)
T 4eqm_A 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPNVTT---DVRKDIP 241 (294)
T ss_dssp --------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH--HHHHHSSCCCCHHH---HSCTTSC
T ss_pred cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhhccCCCcch---hcccCCC
Confidence 1 12245668899999888899999999999999999999999874321110 00000000000000 0001223
Q ss_pred HHHHHHHHHccCCCCCCCC-CHHHHHHHhhccCC
Q 002186 920 KLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 952 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~ 952 (955)
..+.+++.+|++.||++|| +++++.+.|+.+..
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 5577889999999999998 89999999987644
No 79
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.8e-37 Score=341.76 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=195.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 6 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 6 DFD--YLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 355 788999999999999985 579999999997532 2355678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 160 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA 160 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC
Confidence 999999999999975 467888899999999999999999 999999999999999999999999999875322211
Q ss_pred --CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 843 --SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
....+++.|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. ....
T Consensus 161 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~ 230 (337)
T 1o6l_A 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------RLFELILMEE-IRFPR---TLSP 230 (337)
T ss_dssp CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCH
T ss_pred cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCH
Confidence 1223567788999998888999999999999999999999998743211 1111111111 11111 1234
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
++.+++.+||+.||++|| +++|++++
T Consensus 231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 567888999999999999 89999764
No 80
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2e-37 Score=347.17 Aligned_cols=250 Identities=17% Similarity=0.175 Sum_probs=197.8
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.+.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 26 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~ 103 (362)
T 2bdw_A 26 KFSDNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFH 103 (362)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CcccCeE--EeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3445576 788999999999999985 579999999997543 2345688999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~ 836 (955)
|+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||+++.
T Consensus 104 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 999999999999999865 457888999999999999999999 99999999999999865 4599999999876
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...+++.|.+||+.....++.++||||+||++|||+||+.||....... ....+.........+.+
T Consensus 181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~ 254 (362)
T 2bdw_A 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR------LYAQIKAGAYDYPSPEW 254 (362)
T ss_dssp CTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTGG
T ss_pred ecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCCCCCCcccc
Confidence 5433221 2235667889999988889999999999999999999999987432110 11111111100011122
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+.+++.+||+.||++|||++|++++
T Consensus 255 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 2334567789999999999999999999864
No 81
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=351.53 Aligned_cols=248 Identities=16% Similarity=0.183 Sum_probs=194.2
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||+||+|+. .+++.||||+++.. ......+.+|+.++++++|||||++++++.+.+..
T Consensus 72 ~~~--~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 72 NIT--LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GEE--EEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HeE--EeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 355 778899999999999983 36789999999653 22345688899999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc---------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---CceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT---------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~ 829 (955)
++|||||++|+|.++++. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999975 367889999999999999999999 999999999999999554 59999
Q ss_pred cccccccccccC----CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLAD----GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~----~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++...... .....++..|.+||......++.++|||||||++|||+| |..||...... .....+.
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~------~~~~~i~ 300 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 300 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHH
Confidence 999987543221 111223456889999888889999999999999999998 88887643211 0111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
........ ......+.+++.+||+.||++|||++||+++|+.+.
T Consensus 301 ~~~~~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 301 SGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCC---ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11101111 122345778999999999999999999999997653
No 82
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-37 Score=342.80 Aligned_cols=261 Identities=18% Similarity=0.217 Sum_probs=192.1
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHh--ccCCCCceeEeEEEEcC----C
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIG--TVRHKNLIRLLGFCYNR----H 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~--~l~H~niv~l~g~~~~~----~ 759 (955)
.+.+.|. ..+.||+|+||.||+|+.. |+.||||++...... .+.+|.+++. .++|||||++++++... +
T Consensus 34 ~~~~~y~--~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~--~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 34 TIAKQIQ--MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEA--SWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp THHHHCE--EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred ccccceE--EEeEeecCCCeEEEEEEEC-CceEEEEEEeccccc--hhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 4455677 8899999999999999874 899999999754332 3333444444 45999999999999876 7
Q ss_pred eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCC-----CCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC-----YPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~-----~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
..++||||+++|+|.++++. ..++.....++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 89999999999999999975 5689999999999999999999762 45899999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhccCCccc------ccchhHHHHHHHHHhCCCC----------CCCCCCC
Q 002186 834 KYLTQLADGS------FPAKIAWTESGEFYNAMKEEMY------MDVYGFGEIILEILTNGRL----------TNAGSSL 891 (955)
Q Consensus 834 ~~~~~~~~~~------~~~~~~~~~~~e~~~~~~~~~~------~DV~S~Gvvl~Elltg~~p----------~~~~~~~ 891 (955)
++........ ...++..|.+||.........+ +|||||||++|||+||..| +......
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 8654332211 1235566888998876655554 8999999999999999544 3321111
Q ss_pred CCcccccccccccccccc-C-CCC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 892 QNKPIDGLLGEMYNENEV-G-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 892 ~~~~~~~~~~~~~~~~~~-~-~~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
.. .. ............ . .+. ...+...++.+++.+||+.||++|||++||+++|+.+...
T Consensus 269 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 269 DP-SY-EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp SC-CH-HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CC-ch-hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 00 00 000000000000 0 011 1135667788999999999999999999999999987543
No 83
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=7.3e-38 Score=351.53 Aligned_cols=250 Identities=22% Similarity=0.226 Sum_probs=196.1
Q ss_pred hhcccchhhhccCCCCCceEEEe------CCCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 759 (955)
+.|. ..+.||+|+||.||+|. ..+|+.||||+++.... ..+.+.+|+++++++ +|||||+++++|.+.+
T Consensus 22 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 22 DRLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccee--eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3455 78899999999999996 35678999999976432 345788999999999 7999999999998765
Q ss_pred -eeEEEEeecCCCChhHHhhcC----------------------------------------------------------
Q 002186 760 -QAYLLYDYLPNGNLSEKIRTK---------------------------------------------------------- 780 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~~---------------------------------------------------------- 780 (955)
..++|||||++|+|.++++..
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 489999999999999999752
Q ss_pred ----------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----Ccc
Q 002186 781 ----------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----FPA 846 (955)
Q Consensus 781 ----------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----~~~ 846 (955)
.++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 67788889999999999999999 9999999999999999999999999998754332211 122
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
++..|.+||+.....++.++|||||||++|||+| |+.||....... . ....... ........ .....+.++
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~-~~~~~~~---~~~~~~~~---~~~~~l~~l 328 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-E-FCRRLKE---GTRMRAPD---YTTPEMYQT 328 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-H-HHHHHHH---TCCCCCCT---TCCHHHHHH
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-H-HHHHHHc---CCCCCCCC---CCCHHHHHH
Confidence 4455889999888889999999999999999999 888886432211 0 0000000 00010011 122457788
Q ss_pred HHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 926 ALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+..||+.||++|||++|++++|+.+.
T Consensus 329 i~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 329 MLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999998763
No 84
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.1e-36 Score=333.98 Aligned_cols=248 Identities=23% Similarity=0.372 Sum_probs=197.9
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
+.||+|+||.||+|.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 7899999999999997 68899999986421 23567889999999999999999999999999999999999999
Q ss_pred ChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----
Q 002186 772 NLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG---- 842 (955)
Q Consensus 772 sL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~---- 842 (955)
+|.+++.. ..+|..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 116 ~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~ 192 (307)
T 2nru_A 116 SLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMT 192 (307)
T ss_dssp BHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEEC
T ss_pred cHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecccccccccccccccc
Confidence 99999863 468999999999999999999999 999999999999999999999999999875443221
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-c-------ccccccccccccCCCCc
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-D-------GLLGEMYNENEVGSSSS 914 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~ 914 (955)
....++..|.+||...+ .++.++|||||||++|||+||+.||........... . ..+....++. . ...
T Consensus 193 ~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~ 268 (307)
T 2nru_A 193 SRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKK-M--NDA 268 (307)
T ss_dssp SSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSS-C--SCC
T ss_pred cccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhcccc-c--ccc
Confidence 11224556788887765 478899999999999999999999875432211000 0 0011111111 1 222
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.......+.+++.+||+.||++|||++||+++|++++.
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 34566778899999999999999999999999998764
No 85
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.4e-37 Score=334.65 Aligned_cols=247 Identities=21% Similarity=0.223 Sum_probs=186.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. +|+.||||+++.... ..+.+.+|++++++++||||++++++|.+++..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 778999999999999997 489999999865322 24678899999999999999999999999999999999999
Q ss_pred CCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------CCCceECccccccccccc
Q 002186 770 NGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--------NMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 770 ~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--------~~~~ki~DfGl~~~~~~~ 840 (955)
+|+|.+++.. ..++.....++.|+++||+|||+....+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 90 ~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~ 169 (271)
T 3dtc_A 90 GGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT 169 (271)
T ss_dssp TEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-------
T ss_pred CCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccccc
Confidence 9999999975 5688899999999999999999983334999999999999986 678999999998765433
Q ss_pred CCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 841 DGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
......++..|.+||...+..++.++||||+||++|||+||+.||........ .......... .... .....
T Consensus 170 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~---~~~~---~~~~~ 241 (271)
T 3dtc_A 170 TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAV--AYGVAMNKLA---LPIP---STCPE 241 (271)
T ss_dssp ------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHH--HHHHHTSCCC---CCCC---TTCCH
T ss_pred cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH--HHhhhcCCCC---CCCC---cccCH
Confidence 33233355668899999888899999999999999999999999874321100 0000000000 0001 12234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+.+++.+||+.||++|||++|++++|+++
T Consensus 242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 577899999999999999999999999864
No 86
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.6e-37 Score=346.90 Aligned_cols=245 Identities=15% Similarity=0.169 Sum_probs=194.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+.|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 24 DVYE--LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cceE--EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3466 788999999999999985 589999999996432 1356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECccc
Q 002186 762 YLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFG 832 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DfG 832 (955)
|+|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 999999999999988854 267888899999999999999999 9999999999999986654 9999999
Q ss_pred ccccccccCC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 833 FKYLTQLADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 833 l~~~~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
+++....... ....++.+|.+||+.....++.++||||+||++|||+||+.||..... .....+.......
T Consensus 179 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-------~~~~~i~~~~~~~ 251 (351)
T 3c0i_A 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE-------RLFEGIIKGKYKM 251 (351)
T ss_dssp TCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-------HHHHHHHHTCCCC
T ss_pred ceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-------HHHHHHHcCCCCC
Confidence 9876543221 122356678899999888899999999999999999999999874211 0111111111000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...........+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00011122356788999999999999999999985
No 87
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-37 Score=336.88 Aligned_cols=253 Identities=13% Similarity=0.119 Sum_probs=196.6
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~ 769 (955)
..+.||+|+||+||+|... +|+.||||+++... ...+.+.+|++++++++|||||++++++...+ ..++||||++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (319)
T 4euu_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (319)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCT
T ss_pred EEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCC
Confidence 7789999999999999954 69999999997533 23567789999999999999999999998755 7899999999
Q ss_pred CCChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECccccccccccc
Q 002186 770 NGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 770 ~gsL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~~~~~~ 840 (955)
+|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~ 169 (319)
T 4euu_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (319)
T ss_dssp TCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred CCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence 99999999762 78999999999999999999999 99999999999999 78888999999999765443
Q ss_pred CCCC-cccccccCchhhhh--------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc--ccccccccc------
Q 002186 841 DGSF-PAKIAWTESGEFYN--------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLGEM------ 903 (955)
Q Consensus 841 ~~~~-~~~~~~~~~~e~~~--------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~--~~~~~~~~~------ 903 (955)
.... ..++..|.+||+.. ...++.++|||||||++|||+||+.||......... .........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (319)
T 4euu_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (319)
T ss_dssp CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCE
T ss_pred CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccch
Confidence 3221 22556688888875 467889999999999999999999998632221100 000000000
Q ss_pred -----------ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 904 -----------YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 904 -----------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+...............+.+++.+||+.||++|||++|+++...+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 00000001112245566788999999999999999999999988653
No 88
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.7e-37 Score=346.06 Aligned_cols=248 Identities=16% Similarity=0.143 Sum_probs=188.7
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
+|. ..+.||+|+||+||+|... +|+.||||++.......+.+.+|+..+++++|||||++++++.+++..++||||+
T Consensus 21 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 21 RYD--FVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TEE--EEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cEE--EEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 455 7889999999999999954 8999999999866555667889999999999999999999999999999999999
Q ss_pred CCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--ceECcccccccccccCC-C
Q 002186 769 PNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 769 ~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~~~~~~~~-~ 843 (955)
++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....... .
T Consensus 99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~ 175 (361)
T 3uc3_A 99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK 175 (361)
T ss_dssp CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence 99999999864 578899999999999999999998 9999999999999987765 99999999874332221 1
Q ss_pred CcccccccCchhhhhccCCccc-ccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMY-MDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~-~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++.+|.+||+.....+..+ +||||+||++|||+||+.||......... ......+.... .. .+........+
T Consensus 176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~--~~~~~~~~~~~-~~-~~~~~~~s~~~ 251 (361)
T 3uc3_A 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY--RKTIQRILSVK-YS-IPDDIRISPEC 251 (361)
T ss_dssp -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH--HHHHHHHHTTC-CC-CCTTSCCCHHH
T ss_pred CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH--HHHHHHHhcCC-CC-CCCcCCCCHHH
Confidence 2235667889998877776555 89999999999999999999754322111 11111111111 00 00001122457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 252 ~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 252 CHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHccCChhHCcCHHHHHhC
Confidence 789999999999999999999864
No 89
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-37 Score=338.94 Aligned_cols=237 Identities=16% Similarity=0.130 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+++..++||||+
T Consensus 13 i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~- 91 (336)
T 3h4j_B 13 IRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA- 91 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred EEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-
Confidence 778999999999999994 689999999997532 12456889999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 92 ~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~ 168 (336)
T 3h4j_B 92 GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC 168 (336)
T ss_dssp CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCT
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCCccccccc
Confidence 7899998864 578899999999999999999999 999999999999999999999999999876543322 2223
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+++.|.+||...+..+ +.++||||+||++|||+||+.||........ ...+.... ...+. .....+.++
T Consensus 169 gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~------~~~i~~~~-~~~p~---~~s~~~~~l 238 (336)
T 3h4j_B 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL------FKKVNSCV-YVMPD---FLSPGAQSL 238 (336)
T ss_dssp TSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC------BCCCCSSC-CCCCT---TSCHHHHHH
T ss_pred CCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH------HHHHHcCC-CCCcc---cCCHHHHHH
Confidence 5667889998877665 6889999999999999999999974322110 11111100 00111 122456788
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+||+.||++|||++|+++
T Consensus 239 i~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 239 IRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHcCCChhHCcCHHHHHh
Confidence 99999999999999999986
No 90
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-37 Score=359.79 Aligned_cols=244 Identities=17% Similarity=0.212 Sum_probs=194.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|+++|++++|||||+++|+|.+ +..++|||||++|+|.
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~ 266 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHH
Confidence 677899999999999998888889999998765566789999999999999999999999976 6789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC---ccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---PAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---~~~ 847 (955)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++......... ...
T Consensus 267 ~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~ 343 (452)
T 1fmk_A 267 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 343 (452)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC--------------C
T ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcc
Confidence 99974 378999999999999999999999 99999999999999999999999999997654321111 112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||+| |+.|+...... .....+........+ ......+.+++
T Consensus 344 ~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~l~~li 414 (452)
T 1fmk_A 344 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVERGYRMPCP---PECPESLHDLM 414 (452)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHHTTCCCCCC---TTSCHHHHHHH
T ss_pred cccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHHHHHHH
Confidence 334778898888889999999999999999999 78887632211 011111111001111 12234577899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+||+.||++|||++|+++.|+.+.
T Consensus 415 ~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 415 CQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHccCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999998764
No 91
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.2e-37 Score=345.36 Aligned_cols=247 Identities=17% Similarity=0.141 Sum_probs=183.9
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
+.|. ..+.||+|+||.||+|+.. +|+.||||+++... ..+.+.+|++++++++|||||+++++|.+.+..++||||
T Consensus 53 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 53 DFFE--VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CcEE--EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 4466 7789999999999999964 68899999997543 345678899999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccccccccccCC
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl~~~~~~~~~ 842 (955)
+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 999999999976 457888999999999999999999 9999999999999975 88999999999876543221
Q ss_pred -CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 -SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
....++..|.+||+..+..++.++|||||||++|||+||+.||........ ....+.........+........
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~~ 281 (349)
T 2w4o_A 207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-----MFRRILNCEYYFISPWWDEVSLN 281 (349)
T ss_dssp ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-----HHHHHHTTCCCCCTTTTTTSCHH
T ss_pred cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-----HHHHHHhCCCccCCchhhhCCHH
Confidence 122355668899999888899999999999999999999999874332110 01111111100001111223356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+++.+||+.||++|||+.|+++.
T Consensus 282 ~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 282 AKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHHccCChhhCcCHHHHhcC
Confidence 7789999999999999999999874
No 92
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.5e-37 Score=337.49 Aligned_cols=247 Identities=17% Similarity=0.230 Sum_probs=189.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.... .+|||+++... ...+.+.+|++++++++|||||++++++. .+..++||||+++|
T Consensus 40 ~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~ 116 (307)
T 3lb7_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCCCC
Confidence 77889999999999998643 58999887532 23567889999999999999999999875 45689999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----CC
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----SF 844 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~ 844 (955)
+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 117 ~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~ 193 (307)
T 3lb7_A 117 SLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ 193 (307)
T ss_dssp BHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC------------
T ss_pred cHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccccccccC
Confidence 99999964 568889999999999999999999 999999999999999999999999999875432111 11
Q ss_pred cccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 845 PAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 845 ~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
..++..|.+||... ...++.++|||||||++|||+||+.||........ ...........+. . ..........
T Consensus 194 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~-~--~~~~~~~~~~ 269 (307)
T 3lb7_A 194 PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPD-L--SKLYKNCPKA 269 (307)
T ss_dssp CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCCCCC-S--TTSCSSSCHH
T ss_pred CCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCCCcc-h--hhhhcCCcHH
Confidence 23556688899876 55678899999999999999999999874332110 0000001111111 0 0111122356
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
+.+++.+||+.||++|||++|+++.|+.++
T Consensus 270 l~~li~~~l~~~p~~RPs~~~il~~l~~l~ 299 (307)
T 3lb7_A 270 MKRLVADCVKKVKEERPLFPQILSSIELLQ 299 (307)
T ss_dssp HHHHHHHHSCSSSTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCChhhCcCHHHHHHHHHHHH
Confidence 778899999999999999999999988764
No 93
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=6.9e-36 Score=347.38 Aligned_cols=341 Identities=25% Similarity=0.366 Sum_probs=224.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.|+++++.+.. +| .+..+++|++|||++|.+++..| +..+++|++|++++|.+++..| +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 4567777777777764 44 36777788888888887775543 7777788888888777775443 77777888888
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..+ +.++++|++|++++|.+++ +| .++.+++|++|+++ |.+.+.. .+.++++|++|++++|.+++
T Consensus 119 L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~ 191 (466)
T 1o6v_A 119 LFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD 191 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC
Confidence 88777775433 7777788888887777765 33 47777777777775 3333322 26777777777777777764
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
. ..+..+++|++|++++|.+.+..| +..+++|++|++++|++++. ..+..+++|+.|++++|.+++..| +..
T Consensus 192 ~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~ 263 (466)
T 1o6v_A 192 I--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSG 263 (466)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTT
T ss_pred C--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhc
Confidence 3 346677777777777777776544 56677777777777777653 356677777777777777776544 667
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++..| +..+++|+.|++++|.+.+..| +..+.+|+.|++++|++++..| +..+++|+.|+
T Consensus 264 l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 337 (466)
T 1o6v_A 264 LTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLF 337 (466)
T ss_dssp CTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred CCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeE
Confidence 7777777777777765443 6667777777777777764322 4444555555555555555443 44555666666
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N 471 (955)
+++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|
T Consensus 338 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 385 (466)
T 1o6v_A 338 FYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 385 (466)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCE
T ss_pred CCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCC
Confidence 666655543 245555566666666666555544 455555555555555
No 94
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-38 Score=347.47 Aligned_cols=256 Identities=19% Similarity=0.196 Sum_probs=180.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhc--cCCCCceeEeEEEEcCC----eeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH----QAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~----~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. +|+.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..+
T Consensus 3 ~~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCC--CCEEEEECSSSEEEEC-C-TTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceee--ehhhccCCCCeEEEEEEE-cCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 3455 778999999999999987 5899999998743 33456667777776 79999999999998766 789
Q ss_pred EEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 763 LLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH--------~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
+||||+++|+|.+++++ ..++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 78 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~ 154 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC
T ss_pred EEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCc
Confidence 99999999999999976 5678888999999999999999 66 999999999999999999999999999
Q ss_pred cccccccCCC------CcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhC----------CCCCCCCCCC
Q 002186 834 KYLTQLADGS------FPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNAGSSL 891 (955)
Q Consensus 834 ~~~~~~~~~~------~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg----------~~p~~~~~~~ 891 (955)
++........ ...++..|.+||..... .++.++|||||||++|||+|| +.|+......
T Consensus 155 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3gxj_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp -CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-
T ss_pred ceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCC
Confidence 8654432211 11345668889987665 344689999999999999999 4444322111
Q ss_pred CCcc---ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 892 QNKP---IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 892 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
.... ..........+. .+......+....+.+++.+||+.||++|||++||+++|+.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 235 DPSVEEMRKVVCEQKLRPN-IPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CCCCC-CHHHHTTSCCCCC-CCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CccHHHHHHHHHHhhcCCC-ccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 0000 000001111111 000001125566788999999999999999999999999998764
No 95
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.7e-37 Score=340.82 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=190.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
.+.|. ..+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFE--PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEE--EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCc--eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 45566 7889999999999999965 89999999997533 34567899999999999999999999986543
Q ss_pred ----------------------------------------------------eeEEEEeecCCCChhHHhhcC-----CC
Q 002186 760 ----------------------------------------------------QAYLLYDYLPNGNLSEKIRTK-----RD 782 (955)
Q Consensus 760 ----------------------------------------------------~~~lv~ey~~~gsL~~~l~~~-----~~ 782 (955)
..++|||||++|+|.+++... ..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 379999999999999999763 35
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--------------CCcccc
Q 002186 783 WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--------------SFPAKI 848 (955)
Q Consensus 783 ~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--------------~~~~~~ 848 (955)
+.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....++
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 667889999999999999999 999999999999999999999999999876543211 112255
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||...+..++.++||||+||++|||+||..|+.... ......... ..+.........+.+++.+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~--------~~~~~~~~~---~~~~~~~~~~~~~~~li~~ 308 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV--------RIITDVRNL---KFPLLFTQKYPQEHMMVQD 308 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH--------HHHHHHHTT---CCCHHHHHHCHHHHHHHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH--------HHHHHhhcc---CCCcccccCChhHHHHHHH
Confidence 66889999988889999999999999999999866532100 000111111 1111223444567889999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 002186 929 CTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~ 946 (955)
||+.||++|||++|++++
T Consensus 309 ~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 309 MLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHCSSGGGSCCHHHHHHS
T ss_pred HccCCCCcCCCHHHHhhc
Confidence 999999999999999873
No 96
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.6e-37 Score=331.58 Aligned_cols=246 Identities=20% Similarity=0.258 Sum_probs=199.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...+++.||||+++......+.+.+|++++++++||||+++++++.+++..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 91 (267)
T 3t9t_A 12 FVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLS 91 (267)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHH
T ss_pred eeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHH
Confidence 77889999999999999888999999999876666678899999999999999999999999999999999999999999
Q ss_pred HHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCcccc
Q 002186 775 EKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAKI 848 (955)
Q Consensus 775 ~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~~ 848 (955)
+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...... .....+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 168 (267)
T 3t9t_A 92 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFP 168 (267)
T ss_dssp HHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCC
T ss_pred HHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccccccccccccc
Confidence 99975 368889999999999999999999 99999999999999999999999999987543211 1111233
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVAL 927 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 927 (955)
..|.+||......++.++||||+||++|||+| |+.|+...... .....+........+. .....+.+++.
T Consensus 169 ~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~i~~~~~~~~~~---~~~~~l~~li~ 239 (267)
T 3t9t_A 169 VKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVEDISTGFRLYKPR---LASTHVYQIMN 239 (267)
T ss_dssp GGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCCT---TSCHHHHHHHH
T ss_pred ccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH------HHHHHHhcCCcCCCCc---cCcHHHHHHHH
Confidence 45788899888889999999999999999999 77777532211 0111111110000011 12345778899
Q ss_pred HccCCCCCCCCCHHHHHHHhhccCC
Q 002186 928 LCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 928 ~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+||+.||++|||++|++++|+++..
T Consensus 240 ~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 240 HCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999998754
No 97
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.6e-37 Score=343.58 Aligned_cols=244 Identities=17% Similarity=0.229 Sum_probs=187.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcE----EEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~----vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|+. .+|+. ||+|.++... ...+.+.+|++++++++|||||+++++|.+.+ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEEEEEe
Confidence 788999999999999984 45554 5888875432 34567889999999999999999999998754 7899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 174 (327)
T 3poz_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccCCcccc
Confidence 999999999975 468899999999999999999999 99999999999999999999999999997654332211
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..++..|.+||...+..++.++|||||||++|||+| |+.||....... .......... .+......
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-------~~~~~~~~~~--~~~~~~~~ 245 (327)
T 3poz_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE-------ISSILEKGER--LPQPPICT 245 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-------HHHHHHTTCC--CCCCTTBC
T ss_pred cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH-------HHHHHHcCCC--CCCCccCC
Confidence 112345788999988899999999999999999999 888886432111 0111111000 00111223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++|||++|++++|+.+.
T Consensus 246 ~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~ 277 (327)
T 3poz_A 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 45778999999999999999999999997653
No 98
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-37 Score=347.94 Aligned_cols=251 Identities=18% Similarity=0.190 Sum_probs=198.6
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.++.+.|. ..+.||+|+||.||+|+. .+|+.||+|++.... .....+.+|++++++++|||||++++++.+.+..+
T Consensus 47 ~~~~~~y~--i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 124 (387)
T 1kob_A 47 GSVYDYYD--ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV 124 (387)
T ss_dssp SCGGGTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE
T ss_pred CccccceE--EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEE
Confidence 34445666 888999999999999985 579999999997543 24557889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--CCCceECcccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLT 837 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~ 837 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++..
T Consensus 125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~ 201 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201 (387)
T ss_dssp EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceec
Confidence 99999999999999975 468889999999999999999999 9999999999999974 477999999998765
Q ss_pred cccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 838 QLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 838 ~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
...... ...++..|.+||+.....++.++||||+||++|||+||+.||....... ....+.............
T Consensus 202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~------~~~~i~~~~~~~~~~~~~ 275 (387)
T 1kob_A 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE------TLQNVKRCDWEFDEDAFS 275 (387)
T ss_dssp CTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH------HHHHHHHCCCCCCSSTTT
T ss_pred CCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhCCCCCCccccc
Confidence 432221 1235666889999988889999999999999999999999987432110 011111100000011112
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....++.+++.+||+.||++|||++|++++
T Consensus 276 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 276 SVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 233567789999999999999999999874
No 99
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=347.41 Aligned_cols=247 Identities=21% Similarity=0.249 Sum_probs=195.9
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
+|. ..+.||+|+||.||+|+. .++..||||+++.... ..+.+.+|+++++++ +|||||+++++|.++
T Consensus 70 ~y~--i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 70 RLV--LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred heE--eeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 355 778899999999999984 2456899999976432 346788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 999999999999999999965 268899999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++....... ....++..|.+||+..+..++.++|||||||++|||+| |+.|+..... .
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~--- 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-E--- 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-H---
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-H---
Confidence 9999999999999876543221 11123445788999888889999999999999999999 8888763321 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+.......... ....++.+++.+||+.||++|||++||++.|+++
T Consensus 301 --~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 301 --ELFKLLKEGHRMDKPS---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp --HHHHHHHTTCCCCCCS---SCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHHcCCCCCCCc---cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0111111110010011 1234577889999999999999999999999865
No 100
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.1e-37 Score=341.69 Aligned_cols=246 Identities=16% Similarity=0.182 Sum_probs=193.0
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
+.|. ..+.||+|+||+||+|+. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus 7 ~~y~--i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 84 (323)
T 3tki_A 7 EDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (323)
T ss_dssp TCEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhce--eeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 3455 788999999999999985 4899999999965332 2456789999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred EcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999999976 468899999999999999999998 999999999999999999999999999875432211
Q ss_pred ---CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 ---SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
....++..|.+||+.....+ +.++||||+||++|||+||+.||.......... ....... . ........
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~-----~~~~~~~-~-~~~~~~~~ 234 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY-----SDWKEKK-T-YLNPWKKI 234 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHH-----HHHHTTC-T-TSTTGGGS
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHH-----HHHhccc-c-cCCccccC
Confidence 12235566888998877664 778999999999999999999997433221100 0000000 0 00111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 235 DSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 3456789999999999999999999864
No 101
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.9e-37 Score=343.26 Aligned_cols=258 Identities=20% Similarity=0.250 Sum_probs=191.7
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc-----CCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-----RHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-----~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. +|+.||||+++..........+|+..+..++||||+++++++.. ....++|
T Consensus 14 ~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 14 NLK--LLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp SEE--EEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred Hhh--eeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 355 788999999999999976 78999999997544333333445555667899999999986643 2367899
Q ss_pred EeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCC------CCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 765 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDC------YPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~------~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
|||+++|+|.+++.. ..++.....++.|+++||+|||+.+ .++|+||||||+|||++.++.+||+|||+++..
T Consensus 91 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~ 170 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170 (336)
T ss_dssp ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeec
Confidence 999999999999975 4588899999999999999999873 348999999999999999999999999998754
Q ss_pred cccCC----------CCcccccccCchhhhhc-------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccc-
Q 002186 838 QLADG----------SFPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGL- 899 (955)
Q Consensus 838 ~~~~~----------~~~~~~~~~~~~e~~~~-------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~- 899 (955)
..... ....++..|.+||...+ ..++.++|||||||++|||+||+.|+..+...........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~ 250 (336)
T 3g2f_A 171 TGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQT 250 (336)
T ss_dssp SSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHH
T ss_pred ccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhc
Confidence 32110 11224566888898765 4566789999999999999999888775443222111100
Q ss_pred ----------cc-----ccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 900 ----------LG-----EMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 900 ----------~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.. ....+...............+.+++.+||+.||++|||++|+++.|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~l 316 (336)
T 3g2f_A 251 EVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAEL 316 (336)
T ss_dssp HHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHH
Confidence 00 0000000000111223556788999999999999999999999999865
No 102
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-37 Score=341.84 Aligned_cols=250 Identities=20% Similarity=0.237 Sum_probs=198.3
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|++++++++|||||+++++|.+.+..
T Consensus 48 ~~~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 48 NIE--YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GCE--EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HCe--eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 355 778899999999999986 3468999999975432 356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--------------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 002186 762 YLLYDYLPNGNLSEKIRT--------------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 815 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--------------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~ 815 (955)
++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCc
Confidence 999999999999999964 357888899999999999999999 999999999
Q ss_pred CCeeeCCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCC
Q 002186 816 SNIVFDENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSS 890 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~ 890 (955)
+||+++.++.+||+|||+++....... ....++..|.+||......++.++|||||||++|||+| |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999875432211 11223445788998888889999999999999999999 8888864321
Q ss_pred CCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 891 LQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
. .....+.+........ .....+.+++.+||+.||++|||++|+++.|+++...
T Consensus 283 ~------~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 283 E------EVIYYVRDGNILACPE---NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp H------HHHHHHHTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred H------HHHHHHhCCCcCCCCC---CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 1 1111111111011111 2234577899999999999999999999999988654
No 103
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.5e-35 Score=344.43 Aligned_cols=358 Identities=22% Similarity=0.307 Sum_probs=288.9
Q ss_pred CCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCccc
Q 002186 109 SHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP 188 (955)
Q Consensus 109 s~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~ 188 (955)
..+.+.+.++. ..+++|++|++++|.+.. +| .+..+++|++|||++|.+++..| +.++++|++|+|++|.+++.
T Consensus 32 ~~~~~~~~i~~--~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 105 (466)
T 1o6v_A 32 GKTNVTDTVSQ--TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADI 105 (466)
T ss_dssp TCSSTTSEECH--HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC
T ss_pred cccccccccCh--hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccC
Confidence 33444444432 457899999999999985 55 48899999999999999997544 99999999999999999976
Q ss_pred CCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCC
Q 002186 189 IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNL 268 (955)
Q Consensus 189 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l 268 (955)
.| ++++++|++|++++|.+++..+ +..+++|++|++++|.+.+ ++ .++++++|++|+++ |.+.+.. .+.++
T Consensus 106 ~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l 176 (466)
T 1o6v_A 106 TP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLK--PLANL 176 (466)
T ss_dssp GG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCG--GGTTC
T ss_pred hh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCch--hhccC
Confidence 55 9999999999999999987543 8999999999999999886 34 48899999999997 5555433 38899
Q ss_pred CCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEc
Q 002186 269 TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI 348 (955)
Q Consensus 269 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 348 (955)
++|++|++++|.+++. ..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|+.|++
T Consensus 177 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l 250 (466)
T 1o6v_A 177 TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDL 250 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEEC
T ss_pred CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEEC
Confidence 9999999999998864 357889999999999999997655 78899999999999999864 46788999999999
Q ss_pred cCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccc
Q 002186 349 WNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGE 428 (955)
Q Consensus 349 ~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 428 (955)
++|.+++..| +..+++|+.|++++|.+++..| +..+..|+.|++++|.+.+..+ +..+++|+.|++++|++++.
T Consensus 251 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~ 324 (466)
T 1o6v_A 251 ANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDI 324 (466)
T ss_dssp CSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCC
T ss_pred CCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCc
Confidence 9999987655 7888999999999999886433 6667778888888888876544 67778888888888888776
Q ss_pred cchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCC
Q 002186 429 IPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITG 500 (955)
Q Consensus 429 ~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~ 500 (955)
.| +..+++|+.|++++|++++. ..+..+++|++|++++| .+.+..| +..+++|+.|++++|.+++
T Consensus 325 ~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n-~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 325 SP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHN-QISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSS-CCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred hh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCC-ccCccch--hhcCCCCCEEeccCCcccC
Confidence 65 66778888888888887764 35677777888888877 5555555 5667777777777777665
No 104
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.4e-37 Score=341.59 Aligned_cols=246 Identities=16% Similarity=0.183 Sum_probs=177.8
Q ss_pred hhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 696 CEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|++++.+++ |||||++++++.+++..|+||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 46799999999999995 57999999999743 3456778999999997 99999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---CceECcccccccccccCCC--Ccc
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++........ ...
T Consensus 94 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 170 (325)
T 3kn6_A 94 FERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC 170 (325)
T ss_dssp HHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccC
Confidence 999976 468889999999999999999999 999999999999997665 7999999998754332221 222
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc-cccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK-PIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
++..|.+||+.....++.++||||+||++|||+||+.||......... ........+.........+.+.....++.++
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l 250 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDL 250 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHH
Confidence 456688999998888999999999999999999999999743321110 0111111111111111111122345678899
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+||+.||++|||++|++++
T Consensus 251 i~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 251 IQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHHHHCCCTTTCCCTTTSTTC
T ss_pred HHHHCCCChhHCCCHHHHhcC
Confidence 999999999999999998753
No 105
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=8.3e-37 Score=344.03 Aligned_cols=247 Identities=15% Similarity=0.137 Sum_probs=192.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++.... ..+.+.+|..++.++ +|||||++++++.+++..|+
T Consensus 53 ~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 53 DFD--LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred HcE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 355 788999999999999985 5788999999976432 233567888888876 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||||++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 9999999999999975 578889999999999999999999 99999999999999999999999999987532211
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC--c-cccccccccccccccCCCCchH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN--K-PIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+++.|.+||+..+..++.++||||+||++|||+||+.||........ . ........+.... ...+.
T Consensus 208 ~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~--- 283 (396)
T 4dc2_A 208 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR--- 283 (396)
T ss_dssp CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCC-CCCCT---
T ss_pred CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccc-cCCCC---
Confidence 1223366778999999988999999999999999999999999963221110 0 0001111111111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSM------EEALK 945 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~------~ev~~ 945 (955)
....++.+++.+||+.||++||++ +|+++
T Consensus 284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 123457788999999999999985 66665
No 106
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.4e-36 Score=329.73 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=190.2
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch--------HHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR--------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~--------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
|. ..+.||+|+||.||+|.. .+|+.||||++...... .+.+.+|++++++++||||+++++++.+..
T Consensus 21 y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 21 IE--YEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp EE--EEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ce--ehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 55 778899999999999985 58999999998643211 167889999999999999999999997654
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCC-----ceECcc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENME-----PHLAEF 831 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~-----~ki~Df 831 (955)
++||||+++|+|.+.+.. ..++..+..++.|+++||+|||+. + |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 799999999999998854 468999999999999999999998 6 999999999999987776 999999
Q ss_pred cccccccccCCCCcccccccCchhhh--hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 832 GFKYLTQLADGSFPAKIAWTESGEFY--NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 832 Gl~~~~~~~~~~~~~~~~~~~~~e~~--~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
|+++....... ...++..|.+||.. ....++.++||||+||++|||+||+.||....................+
T Consensus 174 g~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 249 (287)
T 4f0f_A 174 GLSQQSVHSVS-GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRP--- 249 (287)
T ss_dssp TTCBCCSSCEE-CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCC---
T ss_pred Ccccccccccc-ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCC---
Confidence 99875432211 12245567888987 3445788999999999999999999998743321100000000001111
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.........+.+++.+||+.||++|||++|+++.|+++
T Consensus 250 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 250 ---TIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp ---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ---CCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 11112235677899999999999999999999999864
No 107
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4.1e-37 Score=338.53 Aligned_cols=249 Identities=19% Similarity=0.233 Sum_probs=197.0
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 24 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 24 NLV--LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hee--eeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 355 778899999999999974 456899999997543 2356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhcC--------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 002186 762 YLLYDYLPNGNLSEKIRTK--------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 815 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~--------------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~ 815 (955)
++||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 9999999999999999752 56788899999999999999999 999999999
Q ss_pred CCeeeCCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCC
Q 002186 816 SNIVFDENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSS 890 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~ 890 (955)
+||+++.++.+||+|||+++....... ....+...|.+||...+..++.++||||+||++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999875533221 11123345788898888888999999999999999999 8888764321
Q ss_pred CCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 891 LQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 891 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.. ....+......... ......+.+++.+||+.||++|||++|+++.|+++..
T Consensus 259 ~~------~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 ER------LFNLLKTGHRMERP---DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GG------HHHHHHTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH------HHHHhhcCCcCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11 01111110001001 1223457789999999999999999999999987643
No 108
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.3e-36 Score=331.57 Aligned_cols=256 Identities=19% Similarity=0.268 Sum_probs=183.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 6 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 6 QFK--QLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred cee--EeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 355 788999999999999985 4799999999975432 34677889999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 767 YLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 767 y~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
|++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 699998864 367888899999999999999999 99999999999999999999999999987654
Q ss_pred ccCC--CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccc
Q 002186 839 LADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLL 900 (955)
Q Consensus 839 ~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~ 900 (955)
.... ....++..|.+||...+ ..++.++||||+||++|||+||+.||....... .|......
T Consensus 160 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 160 IPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp SCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred CCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhh
Confidence 3221 12234566888998765 468899999999999999999999987432110 00000000
Q ss_pred ccccccccc-CCCCchH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhccCC
Q 002186 901 GEMYNENEV-GSSSSLQ---------DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGLKP 952 (955)
Q Consensus 901 ~~~~~~~~~-~~~~~~~---------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~~~ 952 (955)
.. +.+... ....... .....+.+++.+||+.||++|||++|+++. +++...
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 240 PK-YNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp TT-CCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred hh-cccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 00 000000 0000000 123467899999999999999999999864 444433
No 109
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.1e-37 Score=341.93 Aligned_cols=251 Identities=10% Similarity=0.021 Sum_probs=196.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||.+..... .+.+.+|+++++++ +||||+++++++...+..++||||
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 10 NFR--VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TEE--EEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CeE--EEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 355 788999999999999994 6899999999875432 33577899999999 999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-----ceECcccccccccc
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQL 839 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-----~ki~DfGl~~~~~~ 839 (955)
+ +|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~ 162 (330)
T 2izr_A 87 L-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID 162 (330)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred C-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence 9 9999999973 578999999999999999999999 9999999999999998887 99999999976433
Q ss_pred cCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 840 ADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 840 ~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
... ....++..|.+||+..+..++.++|||||||++|||+||+.||........ ......+.......
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 163 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL---KERYQKIGDTKRAT 239 (330)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH---HHHHHHHHHHHHHS
T ss_pred CCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH---HHHHHHHHhhhccC
Confidence 221 122355668899999888899999999999999999999999975332111 11111111100000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......+...++.+++..||+.||.+||++++|.+.|+++
T Consensus 240 ~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 240 PIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp CHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0000000012688899999999999999999999988754
No 110
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=340.01 Aligned_cols=244 Identities=16% Similarity=0.183 Sum_probs=193.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+..|+|
T Consensus 16 ~y~--i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 16 HFE--ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GEE--EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 465 788999999999999984 578999999997532 2356778999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~ 170 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ 170 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCCCc
Confidence 999999999999976 467888899999999999999999 999999999999999999999999999976543322
Q ss_pred -CCcccccccCchhhhhc---cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 -SFPAKIAWTESGEFYNA---MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 -~~~~~~~~~~~~e~~~~---~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
....+++.|.+||+... ..++.++||||+||++|||+||+.||........ ......+.... ...+. ..
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~---~~~~~~~~~~~-~~~p~---~~ 243 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS---KEIVHTFETTV-VTYPS---AW 243 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH---HHHHHHHHHCC-CCCCT---TS
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH---HHHHHHHhhcc-cCCCC---cC
Confidence 12235667889998864 3578899999999999999999999974332111 11111111111 11111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPS-MEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt-~~ev~~ 945 (955)
...+.+++.+||+.||++||+ ++++.+
T Consensus 244 s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 244 SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 345778899999999999998 777764
No 111
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=343.50 Aligned_cols=241 Identities=17% Similarity=0.150 Sum_probs=191.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++++ +|||||++++++.+++..|+
T Consensus 24 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 24 NFE--FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp CEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 455 788999999999999985 579999999997532 2345677889999887 69999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||||++|+|.+++.+ ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 9999999999999975 568888999999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|.+||+.....++.++||||+||++|||+||+.||...... .....+.... ...+. ...
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~ 248 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED------DLFEAILNDE-VVYPT---WLH 248 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSC
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCC
Confidence 11223567789999998888999999999999999999999999743211 1111121111 11111 122
Q ss_pred HHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSM------EEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~------~ev~~ 945 (955)
..+.+++.+|++.||++||++ +|+++
T Consensus 249 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 456788899999999999998 77765
No 112
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=8.9e-37 Score=334.43 Aligned_cols=245 Identities=23% Similarity=0.295 Sum_probs=187.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|.. .|+.||||++... ...+.+.+|++.+++++|||||+++|++.+ ..++||||+++|+|.
T Consensus 12 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 12 VEEVVGRGAFGVVCKAKW-RAKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEEECCSSSEEEEEEE-TTEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTTCBHH
T ss_pred eeeEeecCCCceEEEEEE-CCeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCCCCHH
Confidence 778899999999999987 4789999998643 345678899999999999999999998864 489999999999999
Q ss_pred HHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-ceECcccccccccccCCCCcccc
Q 002186 775 EKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-PHLAEFGFKYLTQLADGSFPAKI 848 (955)
Q Consensus 775 ~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-~ki~DfGl~~~~~~~~~~~~~~~ 848 (955)
++++.. .++.....++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++........ ...++
T Consensus 88 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt 166 (307)
T 2eva_A 88 NVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-NNKGS 166 (307)
T ss_dssp HHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------CC
T ss_pred HHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc-cCCCC
Confidence 999753 467888999999999999999943339999999999999998876 79999999865433221 12245
Q ss_pred cccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHH
Q 002186 849 AWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALL 928 (955)
Q Consensus 849 ~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 928 (955)
..|.+||...+..++.++|||||||++|||+||+.||........ ............ +........+.+++.+
T Consensus 167 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~l~~li~~ 239 (307)
T 2eva_A 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF----RIMWAVHNGTRP---PLIKNLPKPIESLMTR 239 (307)
T ss_dssp TTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH----HHHHHHHTTCCC---CCBTTCCHHHHHHHHH
T ss_pred CceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH----HHHHHHhcCCCC---CcccccCHHHHHHHHH
Confidence 568899999888899999999999999999999999864321110 000000000000 1111223457789999
Q ss_pred ccCCCCCCCCCHHHHHHHhhccC
Q 002186 929 CTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 929 Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
||+.||++|||++|++++|+.+.
T Consensus 240 ~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 240 CWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHG
T ss_pred HhcCChhhCcCHHHHHHHHHHHH
Confidence 99999999999999999988653
No 113
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=6.3e-37 Score=329.32 Aligned_cols=247 Identities=20% Similarity=0.275 Sum_probs=193.6
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|++++++++|||||+++++|.++ +..++||
T Consensus 12 y~--~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 12 LN--FLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp CE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred hH--HHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 55 778999999999999997 48899999997543 2356788999999999999999999999887 7889999
Q ss_pred eecCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||+++|+|.++++.. .++.++..++.|+++||+|||+. .++|+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~- 166 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP- 166 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceeeeccc-
Confidence 999999999999863 58999999999999999999987 123999999999999999999999999887543221
Q ss_pred CCCcccccccCchhhhhccCCc---ccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 GSFPAKIAWTESGEFYNAMKEE---MYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~~~~~---~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
...++..|.+||.......+ .++|||||||++|||+||+.||....... ...........+. . . ...
T Consensus 167 --~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~~~~~~~~~-~--~---~~~ 236 (271)
T 3kmu_A 167 --GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME--IGMKVALEGLRPT-I--P---PGI 236 (271)
T ss_dssp --TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH--HHHHHHHSCCCCC-C--C---TTC
T ss_pred --CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH--HHHHHHhcCCCCC-C--C---CCC
Confidence 12244568888988765443 47999999999999999999986432110 0000000111111 0 1 122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
...+.+++..||+.||++|||++|+++.|+.++.
T Consensus 237 ~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 3457788899999999999999999999998865
No 114
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.9e-37 Score=334.21 Aligned_cols=247 Identities=19% Similarity=0.250 Sum_probs=188.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 84 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ- 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-
T ss_pred hhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-
Confidence 7788999999999999998899999999965332 246778999999999999999999999999999999999985
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCcc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~~ 846 (955)
+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 161 (288)
T 1ob3_A 85 DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161 (288)
T ss_dssp EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccccccccc
Confidence 99998864 467888899999999999999999 999999999999999999999999999876432211 1122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Cccccccccccccccc--
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGLLGEMYNENE-- 908 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~-- 908 (955)
++..|.+||...+ ..++.++||||+||++|||+||+.||....... .|........ +++..
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 240 (288)
T 1ob3_A 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK-YDPNFTV 240 (288)
T ss_dssp CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT-CCTTCCC
T ss_pred ccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccc-ccccccc
Confidence 4556888898765 458899999999999999999999986432110 0000000000 00000
Q ss_pred ---cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 909 ---VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 909 ---~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.............+.+++.+||+.||++|||++|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 241 YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000001223567789999999999999999999863
No 115
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=333.69 Aligned_cols=243 Identities=15% Similarity=0.157 Sum_probs=186.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------------------------hHHHHHHHHHHHh
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------------------------RIKIVSEFITRIG 741 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------------------------~~~~~~~e~~~l~ 741 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+++++
T Consensus 14 ~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 14 QYT--LKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp TEE--EEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ceE--EEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 455 778999999999999984 5799999999965321 1245788999999
Q ss_pred ccCCCCceeEeEEEEc--CCeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCe
Q 002186 742 TVRHKNLIRLLGFCYN--RHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNI 818 (955)
Q Consensus 742 ~l~H~niv~l~g~~~~--~~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~Ni 818 (955)
+++|||||++++++.+ .+..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 9999999999999987 5689999999999999987754 578999999999999999999999 999999999999
Q ss_pred eeCCCCCceECcccccccccccCC--CCcccccccCchhhhhccC---CcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 819 VFDENMEPHLAEFGFKYLTQLADG--SFPAKIAWTESGEFYNAMK---EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 819 Ll~~~~~~ki~DfGl~~~~~~~~~--~~~~~~~~~~~~e~~~~~~---~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
+++.++.+||+|||+++....... ....++..|.+||...... .+.++|||||||++|||+||+.||.......
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~- 247 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMC- 247 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-
T ss_pred EECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHH-
Confidence 999999999999999876543221 1123556688889876544 3678999999999999999999986432110
Q ss_pred ccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 894 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.... .. .+........+.+++.+||+.||++|||++|+++
T Consensus 248 -----~~~~~~~~~-~~-~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 248 -----LHSKIKSQA-LE-FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp -----HHHHHHHCC-CC-CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----HHHHHhccc-CC-CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 000110000 00 0001112345778899999999999999999975
No 116
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-36 Score=334.57 Aligned_cols=240 Identities=18% Similarity=0.169 Sum_probs=195.0
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.++++++|||||++++++.+.+..|+|
T Consensus 7 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 7 DFQ--ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred HcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 355 788999999999999985 589999999997532 2356678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~ 161 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY 161 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCCccc
Confidence 999999999999975 467888899999999999999998 999999999999999999999999999976543222
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...+++.|.+||...+..++.++||||+||++|||+||+.||...... .....+.... ...++. ...++
T Consensus 162 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~i~~~~-~~~p~~---~~~~~ 230 (318)
T 1fot_A 162 -TLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM------KTYEKILNAE-LRFPPF---FNEDV 230 (318)
T ss_dssp -CCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHCC-CCCCTT---SCHHH
T ss_pred -cccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCCC---CCHHH
Confidence 223566688999998888999999999999999999999998743211 1111111111 111111 22456
Q ss_pred HHHHHHccCCCCCCCC-----CHHHHHH
Q 002186 923 LDVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
.+++.+|++.||++|| +++|+++
T Consensus 231 ~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 231 KDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 7888999999999999 8898875
No 117
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=4.3e-37 Score=341.12 Aligned_cols=241 Identities=18% Similarity=0.171 Sum_probs=192.7
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|.+++.++ +|||||++++++.+.+..|
T Consensus 17 ~~y~--~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 17 EDFI--LHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp TTEE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred HHeE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 3465 788999999999999995 579999999997542 2345667788888876 8999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
+||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999999975 678899999999999999999999 9999999999999999999999999998754322
Q ss_pred C--CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 D--GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~--~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
. .....+++.|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. ..
T Consensus 172 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~ 241 (345)
T 1xjd_A 172 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE------ELFHSIRMDN-PFYPR---WL 241 (345)
T ss_dssp TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TS
T ss_pred CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cc
Confidence 1 12223567789999998888999999999999999999999998743211 1111111111 10111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHH-HHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSME-EAL 944 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~-ev~ 944 (955)
...+.+++.+||+.||++||++. |+.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 34577889999999999999997 664
No 118
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=336.01 Aligned_cols=240 Identities=18% Similarity=0.140 Sum_probs=185.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||+||+|+.. +|+.||||++..... .......|+..+.++ +|||||+++++|.+.+..++
T Consensus 57 ~~y~--~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 57 QSFQ--RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHEE--EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4566 8889999999999999965 899999999865322 233344455555544 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+ +|+|.+++.. ..+|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 99999 6799998865 478999999999999999999998 9999999999999999999999999998765432
Q ss_pred CCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 841 DGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 841 ~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
... ...++..|.+||+..+ .++.++|||||||++|||+||+.|+....... ........+ .......
T Consensus 211 ~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~ 278 (311)
T 3p1a_A 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQ-----QLRQGYLPP------EFTAGLS 278 (311)
T ss_dssp ----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH-----HHTTTCCCH------HHHTTSC
T ss_pred CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHH-----HHhccCCCc------ccccCCC
Confidence 221 2225566888998776 68999999999999999999987775322110 000000000 0011223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.++.+++.+||+.||++|||++|++++
T Consensus 279 ~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 279 SELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 567889999999999999999999863
No 119
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.2e-36 Score=349.42 Aligned_cols=252 Identities=19% Similarity=0.218 Sum_probs=192.0
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 758 (955)
++|. ..+.||+|+||+||+|. ..+|+.||||++... ....+.+.+|++++++++|||||++++++...
T Consensus 62 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 62 KRYQ--NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp TTEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred CCeE--EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 4566 78899999999999998 457999999999753 22356678999999999999999999999754
Q ss_pred CeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
...|+|||||++ ++.+.+....++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 215 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC----
T ss_pred CeEEEEEeCCCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecC
Confidence 357999999975 58888888889999999999999999999999 99999999999999999999999999997654
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc----------------cccc
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID----------------GLLG 901 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~----------------~~~~ 901 (955)
..... ...++++|.+||+..+..++.++||||+||++|||++|+.||.+......+... ....
T Consensus 216 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 216 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhh
Confidence 33221 223567799999998889999999999999999999999999754321100000 0000
Q ss_pred ccccccc---------------cCCCCc-hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 EMYNENE---------------VGSSSS-LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 ~~~~~~~---------------~~~~~~-~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+ ...... .......+.+++.+||+.||++|||++|++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 000000 11225678899999999999999999999874
No 120
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.9e-37 Score=337.83 Aligned_cols=244 Identities=21% Similarity=0.278 Sum_probs=189.6
Q ss_pred hhhhccCCCCCceEEEeC-CCCcE----EEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~----vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||+||+|+. .+|+. ||+|.+.... ...+.+.+|+.++++++|||||+++++|. .+..++||||
T Consensus 17 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~ 95 (325)
T 3kex_A 17 KLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQY 95 (325)
T ss_dssp EEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEEC
T ss_pred eeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEe
Confidence 788999999999999984 45554 7888775432 22345678899999999999999999986 4568999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 96 ~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 172 (325)
T 3kex_A 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172 (325)
T ss_dssp CTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred CCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence 999999999965 467888999999999999999999 9999999999999999999999999999865433221
Q ss_pred ---CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 ---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...+...|.+||......++.++|||||||++|||+| |+.||....... ....+... ....... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~~~~---~~~~~~~---~~~ 243 (325)
T 3kex_A 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---VPDLLEKG---ERLAQPQ---ICT 243 (325)
T ss_dssp C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---HHHHHHTT---CBCCCCT---TBC
T ss_pred cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---HHHHHHcC---CCCCCCC---cCc
Confidence 1123445788999988889999999999999999999 998886432111 00001000 0000011 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++|||++|++++|+.+.
T Consensus 244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 34667888999999999999999999998764
No 121
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.4e-36 Score=337.70 Aligned_cols=247 Identities=15% Similarity=0.137 Sum_probs=192.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++.++ +|||||++++++.+.+..|+
T Consensus 10 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 10 DFD--LLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 355 788999999999999995 579999999997542 2245577889999887 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999999975 578888999999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---ccccccccccccccccCCCCchH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---KPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+++.|.+||+.....++.++||||+||++|||+||+.||........ .........+.... ...+.
T Consensus 165 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p~--- 240 (345)
T 3a8x_A 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-IRIPR--- 240 (345)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCC-CCCCT---
T ss_pred CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCC-CCCCC---
Confidence 1122356778899999888899999999999999999999999963211100 00001111111111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSM------EEALK 945 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~------~ev~~ 945 (955)
.....+.+++.+||+.||++||++ +|+++
T Consensus 241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 123457788999999999999995 66664
No 122
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-37 Score=341.74 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=194.7
Q ss_pred hhhhccCCCCCceEEEeC------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 49 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 128 (344)
T 1rjb_A 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIF 128 (344)
T ss_dssp EEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEE
Confidence 778999999999999984 356789999997532 2356788999999999 8999999999999999999999
Q ss_pred eecCCCChhHHhhcC-------------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 766 DYLPNGNLSEKIRTK-------------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 766 ey~~~gsL~~~l~~~-------------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||++
T Consensus 129 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll 205 (344)
T 1rjb_A 129 EYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLV 205 (344)
T ss_dssp ECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTCSGGGEEE
T ss_pred ecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEE
Confidence 999999999999752 57888899999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCCC----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGSF----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~~----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++......... ..++..|.+||......++.++|||||||++|||+| |+.||....... .
T Consensus 206 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~ 283 (344)
T 1rjb_A 206 THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA--N 283 (344)
T ss_dssp ETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH--H
T ss_pred cCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH--H
Confidence 999999999999987654332211 113345788998888889999999999999999999 888886432211 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
............ .. ......+.+++.+||+.||++|||++|++++|+.+..
T Consensus 284 ~~~~~~~~~~~~---~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 284 FYKLIQNGFKMD---QP---FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp HHHHHHTTCCCC---CC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred HHHHHhcCCCCC---CC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 001111111110 01 1123457788999999999999999999999987654
No 123
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.2e-36 Score=328.99 Aligned_cols=248 Identities=20% Similarity=0.237 Sum_probs=189.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||+||+|.. .+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++||||+++
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 85 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ 85 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC
Confidence 778999999999999995 5799999999975322 346778999999999999999999999999999999999985
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CCc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SFP 845 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~~ 845 (955)
++.+.+.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 86 -~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 161 (292)
T 3o0g_A 86 -DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAE 161 (292)
T ss_dssp -EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSC
T ss_pred -CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCC
Confidence 56555543 568889999999999999999999 999999999999999999999999999976543221 122
Q ss_pred ccccccCchhhhhccC-CcccccchhHHHHHHHHHhCCCCCCCCCCCCC----------------ccccccccccccc--
Q 002186 846 AKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN----------------KPIDGLLGEMYNE-- 906 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~-~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~----------------~~~~~~~~~~~~~-- 906 (955)
.++.+|.+||...+.. ++.++||||+||++|||+||+.|+..+..... |............
T Consensus 162 ~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (292)
T 3o0g_A 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPM 241 (292)
T ss_dssp CSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCC
T ss_pred ccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccccc
Confidence 3456688899886655 79999999999999999999999764332111 0000000000000
Q ss_pred --cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 --NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 --~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.........+.....+.+++.+|++.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 242 YPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000001112234567789999999999999999999863
No 124
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.7e-36 Score=338.45 Aligned_cols=252 Identities=15% Similarity=0.159 Sum_probs=194.9
Q ss_pred hhhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc------chHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 684 ANDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA------TRIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 684 ~~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
..++.++|. ..+.||+|+||+||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.
T Consensus 21 ~~~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 98 (345)
T 3hko_A 21 LLELQKKYH--LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE 98 (345)
T ss_dssp HHHHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhhhee--ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc
Confidence 456677788 889999999999999985 578999999996532 23567889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc------------------------------------------CCCHHHHHHHHHHHH
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT------------------------------------------KRDWAAKYKIVLGVA 794 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~------------------------------------------~~~~~~~~~i~~~ia 794 (955)
+.+..++|||||++|+|.+++.. ..++.....++.|++
T Consensus 99 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 178 (345)
T 3hko_A 99 DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178 (345)
T ss_dssp CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 99999999999999999999852 013445678999999
Q ss_pred HHHHHHhcCCCCCcccCCCCCCCeeeCCCC--CceECcccccccccccCC------CCcccccccCchhhhhc--cCCcc
Q 002186 795 RGLCFLHHDCYPAIPHGDLKASNIVFDENM--EPHLAEFGFKYLTQLADG------SFPAKIAWTESGEFYNA--MKEEM 864 (955)
Q Consensus 795 ~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~--~~ki~DfGl~~~~~~~~~------~~~~~~~~~~~~e~~~~--~~~~~ 864 (955)
+||+|||+. +|+||||||+||+++.++ .+||+|||+++....... ....++..|.+||.... ..++.
T Consensus 179 ~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 255 (345)
T 3hko_A 179 SALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255 (345)
T ss_dssp HHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCT
T ss_pred HHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCc
Confidence 999999999 999999999999998766 899999999875433211 11224566888998865 57888
Q ss_pred cccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 002186 865 YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL 944 (955)
Q Consensus 865 ~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~ 944 (955)
++|||||||++|||+||+.||...... ...............+........+.+++.+||+.||++|||+.|++
T Consensus 256 ~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l 329 (345)
T 3hko_A 256 KCDAWSAGVLLHLLLMGAVPFPGVNDA------DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence 999999999999999999998643211 11111111111111111122345677899999999999999999998
Q ss_pred HH
Q 002186 945 KL 946 (955)
Q Consensus 945 ~~ 946 (955)
+.
T Consensus 330 ~h 331 (345)
T 3hko_A 330 QH 331 (345)
T ss_dssp HS
T ss_pred cC
Confidence 73
No 125
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.5e-37 Score=349.12 Aligned_cols=246 Identities=15% Similarity=0.100 Sum_probs=193.3
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++++.++|||||+++++|.+++..|+|
T Consensus 70 ~y~--~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 70 DYE--VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccE--EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 355 788999999999999995 479999999997532 1234577899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC--
Q 002186 765 YDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD-- 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~-- 841 (955)
||||++|+|.+++++ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 148 ~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~ 224 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV 224 (410)
T ss_dssp ECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE
T ss_pred EeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc
Confidence 999999999999976 567888889999999999999999 99999999999999999999999999997654322
Q ss_pred -CCCcccccccCchhhhhccC----CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 842 -GSFPAKIAWTESGEFYNAMK----EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 -~~~~~~~~~~~~~e~~~~~~----~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+++.|.+||+..... ++.++|||||||++|||+||+.||...... .....+.........+...
T Consensus 225 ~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~p~~~ 298 (410)
T 3v8s_A 225 RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSLTFPDDN 298 (410)
T ss_dssp ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCCCCTTC
T ss_pred cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhccccccCCCcc
Confidence 11233667788999887654 778999999999999999999999743211 1111111110000001111
Q ss_pred HHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
.....+.+++.+|+..+|++ ||+++||+++
T Consensus 299 ~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 299 DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 12345678888999999988 9999999864
No 126
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-36 Score=330.14 Aligned_cols=247 Identities=21% Similarity=0.263 Sum_probs=199.1
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.|. ..+.||+|+||.||+|... +|..||||+++......+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 14 ~~~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 91 (288)
T 3kfa_A 14 DIT--MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 91 (288)
T ss_dssp GEE--EEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred cee--EEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcC
Confidence 355 7788999999999999964 6889999999876666778899999999999999999999999999999999999
Q ss_pred CCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 769 PNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 769 ~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
++|+|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 92 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 168 (288)
T 3kfa_A 92 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168 (288)
T ss_dssp TTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE
T ss_pred CCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc
Confidence 99999999964 368888999999999999999999 99999999999999999999999999987654322111
Q ss_pred ---cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 845 ---PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 845 ---~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
..+...|.+||......++.++||||+||++|||+| |..|+....... ........... ... .....
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~~~~~~~~~---~~~---~~~~~ 239 (288)
T 3kfa_A 169 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYELLEKDYRM---ERP---EGCPE 239 (288)
T ss_dssp ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHHHHHTTCCC---CCC---TTCCH
T ss_pred ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHhccCCC---CCC---CCCCH
Confidence 112345788999888889999999999999999999 777775432111 00111111111 001 12234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 921 LVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+.+++..|++.||++|||++|+++.|+.+
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 577889999999999999999999998865
No 127
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.3e-37 Score=338.01 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=185.2
Q ss_pred hcccchhhhccCCCCCceEEEeCCC-C---cEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee-
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPT-G---ITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA- 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~-g---~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~- 761 (955)
+|. ..+.||+|+||.||+|.... + ..||||+++.. ....+.+.+|++++++++|||||++++++...+..
T Consensus 24 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 24 QFT--LGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp -CE--EEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred HeE--EeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 355 78899999999999999653 3 27999999753 23456788999999999999999999999877655
Q ss_pred -----EEEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 762 -----YLLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 762 -----~lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
++||||+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEE
Confidence 999999999999999864 368889999999999999999999 9999999999999999999999
Q ss_pred CcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 829 AEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+|||+++........ ...+...|.+||......++.++|||||||++|||+| |+.||....... .....
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~------~~~~~ 252 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------IYNYL 252 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG------HHHHH
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH------HHHHH
Confidence 999998764332211 1112345788898888889999999999999999999 777776432211 11111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
......... ......+.+++.+||+.||++|||++|+++.|+++.
T Consensus 253 ~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 253 IGGNRLKQP---PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp HTTCCCCCC---TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCCCCCC---CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111101111 122345778999999999999999999999998764
No 128
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-36 Score=341.52 Aligned_cols=245 Identities=20% Similarity=0.230 Sum_probs=183.2
Q ss_pred hhhhccCCCCCceEEEeCC--C--CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP--T--GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~--~--g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ey 767 (955)
..+.||+|+||.||+|+.. + +..||||.++... ...+.+.+|++++++++|||||+++++|.. ++..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 5678999999999999853 3 3468999986532 345678899999999999999999999865 4578999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 173 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 173 MKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred CCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 999999999975 357888899999999999999999 999999999999999999999999999875432211
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
........|.+||......++.++|||||||++|||+||+.|++.+....... ...........+. ..
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~-----~~~~~~~~~~~p~---~~ 321 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT-----VYLLQGRRLLQPE---YC 321 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH-----HHHHTTCCCCCCT---TC
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH-----HHHHcCCCCCCCC---CC
Confidence 11113345788999888889999999999999999999655544332221111 0111111011111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++|||++|+++.|+.+
T Consensus 322 ~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 322 PDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 34577889999999999999999999999865
No 129
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=7.5e-37 Score=336.27 Aligned_cols=248 Identities=18% Similarity=0.223 Sum_probs=197.2
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~ 760 (955)
.|. ..+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|+++++++ +|||||+++++|.+++.
T Consensus 24 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 24 RLS--FGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhh--HHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 355 778899999999999973 4678999999975432 356788999999999 99999999999999999
Q ss_pred eEEEEeecCCCChhHHhhcC--------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 761 AYLLYDYLPNGNLSEKIRTK--------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~~--------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
.++||||+++|+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 99999999999999999752 67889999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++........ ...+...|.+||......++.++|||||||++|||+| |+.||....... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~- 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K- 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H-
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H-
Confidence 99999999999998765433221 1123345788998888889999999999999999999 888876432111 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
............ . . ......+.+++.+||+.||++|||++|++++|+++
T Consensus 257 ~~~~~~~~~~~~-~--~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 305 (313)
T 1t46_A 257 FYKMIKEGFRML-S--P---EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305 (313)
T ss_dssp HHHHHHHTCCCC-C--C---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHhccCCCCC-C--c---ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 001111111110 0 1 11234577889999999999999999999999865
No 130
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.5e-36 Score=328.32 Aligned_cols=247 Identities=16% Similarity=0.173 Sum_probs=185.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|... .+..||||+++... ...+.+.+|+..+++++|||||++++++. ++..++
T Consensus 16 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 16 RIE--LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GEE--EEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred HeE--EEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 355 7788999999999999853 35679999987532 23567889999999999999999999984 567899
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 9999999999999974 468899999999999999999999 9999999999999999999999999998765432
Q ss_pred CCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 841 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 841 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
... ...+...|.+||......++.++||||+||++|||+| |..||...... .....+......... .
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~------~~~~~i~~~~~~~~~---~ 240 (281)
T 1mp8_A 170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGERLPMP---P 240 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG------GHHHHHHTTCCCCCC---T
T ss_pred cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH------HHHHHHHcCCCCCCC---C
Confidence 211 1113345788999888889999999999999999997 77787643211 111111111101111 1
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.....+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 241 NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 22345778899999999999999999999998763
No 131
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=5.8e-37 Score=333.09 Aligned_cols=243 Identities=18% Similarity=0.233 Sum_probs=191.4
Q ss_pred hhhhccCCCCCceEEEeCC-CC-------cEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-TG-------ITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g-------~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|+.. +| ..||+|+++... ...+.+.+|++++++++|||||++++++.+++..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 7788999999999999853 33 579999997543 34667889999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--------ceECccccc
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--------PHLAEFGFK 834 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--------~ki~DfGl~ 834 (955)
||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||++
T Consensus 92 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~ 168 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS 168 (289)
T ss_dssp ECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSC
T ss_pred ECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeeccCccc
Confidence 99999999999975 278889999999999999999999 9999999999999998887 999999998
Q ss_pred ccccccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
....... ...+...|.+||.... ..++.++|||||||++|||+||+.|+......... ..... ..... ..
T Consensus 169 ~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~--~~~~~---~~~~~--~~ 239 (289)
T 4fvq_A 169 ITVLPKD--ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK--LQFYE---DRHQL--PA 239 (289)
T ss_dssp TTTSCHH--HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH--HHHHH---TTCCC--CC
T ss_pred ccccCcc--ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH--HHHhh---ccCCC--CC
Confidence 6432211 1123445788898876 67899999999999999999987766543221100 00000 00001 00
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
. ....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 240 ~---~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 240 P---KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp C---SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred C---CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 0 12346688889999999999999999999998754
No 132
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=9.7e-37 Score=346.20 Aligned_cols=241 Identities=15% Similarity=0.182 Sum_probs=183.5
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHh-ccCCCCceeEeEEEEc----CCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIG-TVRHKNLIRLLGFCYN----RHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~-~l~H~niv~l~g~~~~----~~~~~lv~ey~~~ 770 (955)
+.||+|+||+||+|.. .+|+.||||+++.. ..+.+|++++. ..+|||||++++++.. .+..|+|||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~g 143 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG 143 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCC
Confidence 6799999999999985 57999999999632 34567777764 4589999999999875 5678999999999
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccccccccccCC-
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl~~~~~~~~~- 842 (955)
|+|.+++.. ..++.+...|+.|+++||+|||+. +|+||||||+|||++. ++.+||+|||+++.......
T Consensus 144 g~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~ 220 (400)
T 1nxk_A 144 GELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL 220 (400)
T ss_dssp EEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----
T ss_pred CcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc
Confidence 999999976 368899999999999999999998 9999999999999997 78899999999976543221
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....++.+|.+||+.....++.++|||||||++|||+||+.||.......... .....+.........+.+.....++
T Consensus 221 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~ 298 (400)
T 1nxk_A 221 TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQYEFPNPEWSEVSEEV 298 (400)
T ss_dssp ------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC--SHHHHHHHTCCCCCTTTTTTSCHHH
T ss_pred ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH--HHHHHHHcCcccCCCcccccCCHHH
Confidence 12235667889999988889999999999999999999999997543321110 0000000000000011112233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 299 ~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 299 KMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp HHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHCCCChhHCcCHHHHhcC
Confidence 889999999999999999999874
No 133
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.7e-37 Score=333.66 Aligned_cols=251 Identities=10% Similarity=0.021 Sum_probs=196.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEee
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
.|. ..+.||+|+||.||+|+ ..+|+.||||++.... ..+.+.+|++.++++ +|+|++++++++.+.+..++||||
T Consensus 11 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 11 HYK--VGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TEE--EEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred ceE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 355 78889999999999999 4689999999986432 234567889999998 799999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC-----ceECcccccccccc
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-----PHLAEFGFKYLTQL 839 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-----~ki~DfGl~~~~~~ 839 (955)
+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++....
T Consensus 88 ~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~ 163 (298)
T 1csn_A 88 L-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD 163 (298)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred c-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence 9 9999999974 478999999999999999999998 9999999999999987776 99999999876543
Q ss_pred cCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 840 ADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 840 ~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
... ....++..|.+||...+..++.++|||||||++|||+||+.||.......... ....+.......
T Consensus 164 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~---~~~~~~~~~~~~ 240 (298)
T 1csn_A 164 PVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ---KYERIGEKKQST 240 (298)
T ss_dssp TTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH---HHHHHHHHHHHS
T ss_pred ccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH---HHHHHHhhccCc
Confidence 221 11224566889999988889999999999999999999999997533211111 011110000000
Q ss_pred C-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 S-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
. ..........+.+++.+||+.||++|||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 0 000012235678899999999999999999999998865
No 134
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.2e-36 Score=328.80 Aligned_cols=246 Identities=19% Similarity=0.269 Sum_probs=196.7
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
.|. ..+.||+|+||.||+|...++..||||+++......+.+.+|++++++++||||+++++++.+ +..++||||++
T Consensus 14 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 90 (279)
T 1qpc_A 14 TLK--LVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYME 90 (279)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCT
T ss_pred hhh--heeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecCC
Confidence 355 778999999999999998888899999998766567788999999999999999999999864 56899999999
Q ss_pred CCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 770 NGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 770 ~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
+|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 167 (279)
T 1qpc_A 91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 167 (279)
T ss_dssp TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence 9999999975 578999999999999999999999 999999999999999999999999999876543211
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
........|.+||......++.++|||||||++|||+| |+.|+...... .....+......... ......
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~ 238 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVIQNLERGYRMVRP---DNCPEE 238 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHHHHHHTTCCCCCC---TTCCHH
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHHHHHhcccCCCCc---ccccHH
Confidence 11112345788898888888999999999999999999 77777542211 001111110000001 112345
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+++..|++.||++|||++|+++.|+.+
T Consensus 239 l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 239 LYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 77889999999999999999999998865
No 135
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=336.31 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=194.7
Q ss_pred hHhhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
+..+.|. ..+.||+|+||.||+|+ ..+|+.||||+++.... ..+.+.+|++++++++|||||++++++
T Consensus 21 ~~~~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 21 EYSQKYS--TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp HHHHHEE--EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred ccccceE--EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 4556677 88899999999999998 56899999999975421 233567799999999999999999999
Q ss_pred EcCCeeEEEEeecCCC-ChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 756 YNRHQAYLLYDYLPNG-NLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~g-sL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
.+.+..++||||+.+| +|.+++.. ..++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 175 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFG 175 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecc
Confidence 9999999999999877 99999976 468889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCCCC-cccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 833 FKYLTQLADGSF-PAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 833 l~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
+++......... ..++..|.+||......+ +.++|||||||++|||+||+.||...... .......
T Consensus 176 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--------~~~~~~~---- 243 (335)
T 3dls_A 176 SAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET--------VEAAIHP---- 243 (335)
T ss_dssp TCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG--------TTTCCCC----
T ss_pred cceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH--------HhhccCC----
Confidence 987654332221 225566888998877665 78899999999999999999998632110 0111111
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.. ....+.+++.+||+.||++|||++|+++.
T Consensus 244 -~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 244 -PYL---VSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -SSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -Ccc---cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 12457788899999999999999999975
No 136
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.2e-36 Score=326.74 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=191.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
+|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 10 DFE--IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cEE--EeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 355 778999999999999984 5788999999965321 245688999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 999999999999875 568888999999999999999998 999999999999999999999999999865433322
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+...|.+||...+..++.++||||+||++|||++|+.||...... .....+.... ...+. .....+
T Consensus 165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~---~~~~~~ 234 (279)
T 3fdn_A 165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYKRISRVE-FTFPD---FVTEGA 234 (279)
T ss_dssp ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHHTC-CCCCT---TSCHHH
T ss_pred cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------HHHHHHHhCC-CCCCC---cCCHHH
Confidence 2233556688999998888899999999999999999999998643211 0111111111 11111 122456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+++.+||+.||++|||++|++++
T Consensus 235 ~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 235 RDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp HHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred HHHHHHHhccChhhCCCHHHHhhC
Confidence 788999999999999999999964
No 137
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.2e-36 Score=333.67 Aligned_cols=250 Identities=18% Similarity=0.175 Sum_probs=198.4
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||.++.... ..+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 85 (321)
T 2a2a_A 8 QKVEDFYD--IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE 85 (321)
T ss_dssp SCHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhccEE--EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 34455677 788999999999999995 4799999999975321 2567889999999999999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAE 830 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~D 830 (955)
+.+..++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEcc
Confidence 99999999999999999999976 357888999999999999999999 999999999999999887 799999
Q ss_pred ccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 831 FGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 831 fGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
||+++....... ....++..|.+||...+..++.++||||+||++|||+||+.||...... .....+.... .
T Consensus 163 fg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~-~ 235 (321)
T 2a2a_A 163 FGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLANITSVS-Y 235 (321)
T ss_dssp CTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHHHHTTC-C
T ss_pred CccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhcc-c
Confidence 999876543322 1223556688999998888999999999999999999999998643211 0111111100 0
Q ss_pred CCCCc-hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSS-LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~-~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+. .......+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 236 DFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred ccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 01123457789999999999999999999874
No 138
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.2e-36 Score=325.49 Aligned_cols=247 Identities=17% Similarity=0.213 Sum_probs=190.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
++.+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..+
T Consensus 19 ~i~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 96 (285)
T 3is5_A 19 TIDDLFI--FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMY 96 (285)
T ss_dssp CHHHHEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred Chhhhee--ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEE
Confidence 3445677 788999999999999985 579999999997643 24577889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECcccc
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGF 833 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl 833 (955)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+
T Consensus 97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~ 173 (285)
T 3is5_A 97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGL 173 (285)
T ss_dssp EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCC
T ss_pred EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeec
Confidence 99999999999998853 468889999999999999999999 99999999999999 4567899999999
Q ss_pred cccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 834 KYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 834 ~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
++........ ...++..|.+||... ..++.++||||+||++|||+||+.||....... .... . ....+. . .
T Consensus 174 a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~-~-~~~~~~-~--~ 245 (285)
T 3is5_A 174 AELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQK-A-TYKEPN-Y--A 245 (285)
T ss_dssp CCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-H-HHCCCC-C--C
T ss_pred ceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhh-h-ccCCcc-c--c
Confidence 8765432221 223556688889875 467889999999999999999999986432100 0000 0 000000 0 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.........+.+++.+||+.||++|||++|+++
T Consensus 246 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 246 VECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp C--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred cccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000012245678899999999999999999986
No 139
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1e-36 Score=333.31 Aligned_cols=250 Identities=18% Similarity=0.271 Sum_probs=193.1
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.||+|+||.||+|+ ..+|+.||||+++... ...+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 77899999999999998 4579999999997532 2356788999999999999999999999876 6689999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 181 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181 (302)
T ss_dssp ECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC
T ss_pred EeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccccCCCc
Confidence 99999999999954 468899999999999999999999 999999999999999999999999999876543221
Q ss_pred -----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCC--------CC-Cccccccccccccccc
Q 002186 843 -----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSS--------LQ-NKPIDGLLGEMYNENE 908 (955)
Q Consensus 843 -----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~--------~~-~~~~~~~~~~~~~~~~ 908 (955)
....++..|.+||......++.++||||+||++|||+||+.|+..... .. ................
T Consensus 182 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (302)
T 4e5w_A 182 YYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKR 261 (302)
T ss_dssp EEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCC
T ss_pred ceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCC
Confidence 112234457888988888889999999999999999999987542100 00 0000000001101110
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
. +........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 262 ~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 262 L---PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp C---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred C---CCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 1 11112235677899999999999999999999999875
No 140
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.7e-37 Score=361.24 Aligned_cols=244 Identities=17% Similarity=0.211 Sum_probs=196.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
..+.||+|+||.||+|...++..||||+++......+.+.+|+++|++++|||||+++++|.+ +..++|||||++|+|.
T Consensus 271 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~ 349 (535)
T 2h8h_A 271 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349 (535)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHH
T ss_pred hheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHH
Confidence 678899999999999998888889999998765566789999999999999999999999976 6789999999999999
Q ss_pred HHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---CCCccc
Q 002186 775 EKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD---GSFPAK 847 (955)
Q Consensus 775 ~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~---~~~~~~ 847 (955)
++++. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++...... ......
T Consensus 350 ~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~ 426 (535)
T 2h8h_A 350 DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKF 426 (535)
T ss_dssp HHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTS
T ss_pred HHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcC
Confidence 99974 378999999999999999999999 99999999999999999999999999987643211 111112
Q ss_pred ccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHH
Q 002186 848 IAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVA 926 (955)
Q Consensus 848 ~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 926 (955)
...|.+||......++.++|||||||++|||+| |+.||...... .....+......... ......+.+++
T Consensus 427 ~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~------~~~~~i~~~~~~~~~---~~~~~~l~~li 497 (535)
T 2h8h_A 427 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------EVLDQVERGYRMPCP---PECPESLHDLM 497 (535)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH------HHHHHHHTTCCCCCC---TTCCHHHHHHH
T ss_pred cccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH------HHHHHHHcCCCCCCC---CCCCHHHHHHH
Confidence 334778898888889999999999999999999 78787532211 011111111001111 12234577899
Q ss_pred HHccCCCCCCCCCHHHHHHHhhccC
Q 002186 927 LLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 927 ~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+||+.||++|||++||++.|+.+.
T Consensus 498 ~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 498 CQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHcCCChhHCcCHHHHHHHHHHHh
Confidence 9999999999999999999999774
No 141
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.3e-36 Score=336.48 Aligned_cols=240 Identities=13% Similarity=0.103 Sum_probs=195.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 42 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 42 QFD--RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HCE--EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 465 788999999999999995 589999999997532 2356678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~ 196 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBC
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCCcc
Confidence 999999999999975 568888999999999999999999 999999999999999999999999999976543322
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...+++.|.+||+..+..++.++||||+||++|||+||+.||...... .....+.... ...+. .....+
T Consensus 197 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~~~~ 265 (350)
T 1rdq_E 197 -TLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI------QIYEKIVSGK-VRFPS---HFSSDL 265 (350)
T ss_dssp -CCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TCCHHH
T ss_pred -cccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH------HHHHHHHcCC-CCCCC---CCCHHH
Confidence 223566788999998888999999999999999999999998743211 1111111111 11111 123457
Q ss_pred HHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 923 LDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
.+++.+||+.||++||+ ++|+++
T Consensus 266 ~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 266 KDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 78899999999999998 888875
No 142
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-35 Score=342.47 Aligned_cols=304 Identities=18% Similarity=0.140 Sum_probs=210.3
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|||++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 32 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 111 (477)
T 2id5_A 32 TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111 (477)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEEC
T ss_pred CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEEC
Confidence 46889999999999888888999999999999999998888888999999999999999888766667888888899999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
++|.+++..|..|.++++|++|+|++|.+++..|..+..+++|++|++++|.+.+ .
T Consensus 112 s~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------~ 167 (477)
T 2id5_A 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS------------------------I 167 (477)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS------------------------C
T ss_pred CCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc------------------------c
Confidence 8888888888888888888888888888876666555555555555555554443 3
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
.+..+.++++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|++++|++++..+..+..+
T Consensus 168 ~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 168 PTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp CHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTC
T ss_pred ChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCc
Confidence 33444555555555555555555555555555555555555555554444444444456666666666654433455666
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
++|+.|++++|.+++..+..+..+++|+.|++++|.+++..| ..|.++++|+.|+|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~------------------------~~~~~l~~L~~L~L 303 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP------------------------YAFRGLNYLRVLNV 303 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT------------------------TTBTTCTTCCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH------------------------HHhcCcccCCEEEC
Confidence 666666666666665555556666666666666665554333 34455667777777
Q ss_pred cCCccccccchhccCCCCCCEEECCCCcCCCC
Q 002186 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 452 (955)
++|++++..+..|..+++|+.|++++|.+...
T Consensus 304 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 304 SGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred CCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 77777766666677777777777777777643
No 143
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.6e-36 Score=336.45 Aligned_cols=260 Identities=18% Similarity=0.202 Sum_probs=196.5
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhc--cCCCCceeEeEEEEcCC---
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGT--VRHKNLIRLLGFCYNRH--- 759 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~--l~H~niv~l~g~~~~~~--- 759 (955)
..+.+.|. ..+.||+|+||.||+|+. +|+.||||+++.. ..+.+.+|++++.. ++||||+++++++...+
T Consensus 38 ~~~~~~y~--~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIV--LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCE--EEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEE--EEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 34456677 888999999999999997 6999999999643 34556677777766 79999999999998876
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHh--------cCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLH--------HDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH--------~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
..++||||+++|+|.+++.+ ..++.++..++.|+++||+||| +. +|+||||||+||+++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEE
Confidence 78999999999999999976 5689999999999999999999 56 99999999999999999999999
Q ss_pred cccccccccccCC------CCcccccccCchhhhhcc------CCcccccchhHHHHHHHHHhC----------CCCCCC
Q 002186 830 EFGFKYLTQLADG------SFPAKIAWTESGEFYNAM------KEEMYMDVYGFGEIILEILTN----------GRLTNA 887 (955)
Q Consensus 830 DfGl~~~~~~~~~------~~~~~~~~~~~~e~~~~~------~~~~~~DV~S~Gvvl~Elltg----------~~p~~~ 887 (955)
|||+++....... ....++..|.+||..... .++.++|||||||++|||+|| +.||..
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~ 269 (342)
T 1b6c_B 190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 269 (342)
T ss_dssp CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred ECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccc
Confidence 9999876543321 122345568888987654 234689999999999999999 455543
Q ss_pred CCCCCCccccccccccccccccC-CCC--chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 888 GSSLQNKPIDGLLGEMYNENEVG-SSS--SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 888 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
...... ................ ... ...+....+.+++.+||+.||++|||++||+++|+.+.+.
T Consensus 270 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 270 LVPSDP-SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TSCSSC-CHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred cCcCcc-cHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 211110 0000000111110000 011 1134566788999999999999999999999999987543
No 144
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.7e-36 Score=330.24 Aligned_cols=253 Identities=14% Similarity=0.176 Sum_probs=189.8
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 32 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 32 ANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp GGEE--EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cceE--EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 3455 788999999999999984 68999999999752 2235678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 764 LYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999863 367888999999999999999999 9999999999999999999999999998754
Q ss_pred cccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 838 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
...... ...+...|.+||......++.++|||||||++|||+||+.||........ ...........+. .. .
T Consensus 187 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~~-~--- 260 (310)
T 2wqm_A 187 SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-SLCKKIEQCDYPP-LP-S--- 260 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHH-HHHHHHHTTCSCC-CC-T---
T ss_pred cCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHH-HHHHHhhcccCCC-Cc-c---
Confidence 332211 11245568889998888899999999999999999999999874321110 0000010100000 00 0
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
......+.+++.+||+.||++|||++||++.|+++++
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 1123457788999999999999999999999988753
No 145
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-36 Score=347.40 Aligned_cols=238 Identities=15% Similarity=0.202 Sum_probs=192.7
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+.+..++||||++
T Consensus 20 l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~ 99 (476)
T 2y94_A 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99 (476)
T ss_dssp EEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCS
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCC
Confidence 778899999999999995 489999999997532 124578899999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 100 gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~ 176 (476)
T 2y94_A 100 GGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 176 (476)
T ss_dssp SEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCC
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccccccccccC
Confidence 9999999975 468888999999999999999998 999999999999999999999999999876543221 1223
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+++.|.+||...+..+ +.++||||+||++|||+||+.||...... .....+.+.. ...+. .....+.++
T Consensus 177 gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s~~~~~L 246 (476)
T 2y94_A 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------TLFKKICDGI-FYTPQ---YLNPSVISL 246 (476)
T ss_dssp SCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------HHHHHHHTTC-CCCCT---TCCHHHHHH
T ss_pred CCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------HHHHHHhcCC-cCCCc---cCCHHHHHH
Confidence 5667889998877654 68899999999999999999998743211 1111111111 10011 122457788
Q ss_pred HHHccCCCCCCCCCHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.+||+.||++|||++|+++
T Consensus 247 i~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 247 LKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp HHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCchhCcCHHHHHh
Confidence 99999999999999999986
No 146
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.2e-36 Score=337.67 Aligned_cols=249 Identities=17% Similarity=0.222 Sum_probs=191.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
++.+.|. ..+.||+|+||+||+|.. .+|+.||||+++.... ...+|++++.++ +|||||++++++.+.+..|+
T Consensus 19 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 19 QFTDGYE--VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp CHHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred CccccEE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 3445576 778999999999999985 5799999999975432 234677888777 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC----CCceECcccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYLT 837 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~~~ 837 (955)
|||||++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++..+ +.+||+|||+++..
T Consensus 94 v~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp EECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 9999999999999975 457888899999999999999999 99999999999998533 34999999999765
Q ss_pred cccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 838 QLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 838 ~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
...... ...+++.|.+||+.....++.++||||+||++|||+||+.||........ ......+...........+
T Consensus 171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~---~~~~~~i~~~~~~~~~~~~ 247 (342)
T 2qr7_A 171 RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTP---EEILARIGSGKFSLSGGYW 247 (342)
T ss_dssp BCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCH---HHHHHHHHHCCCCCCSTTT
T ss_pred cCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCH---HHHHHHHccCCcccCcccc
Confidence 433221 22356678899998887788999999999999999999999974322111 1111111111100001111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 223356778999999999999999999985
No 147
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-36 Score=337.10 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=193.6
Q ss_pred hcccchhhhccCCCCCceEEEeC--------CCCcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--------PTGITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNR 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~ 758 (955)
.|. ..+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++++ +|||||+++++|.+.
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 36 KLT--LGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HeE--EeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 355 778899999999999984 367899999997543 2356788999999999 899999999999999
Q ss_pred CeeEEEEeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+..++||||+++|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEEE
Confidence 9999999999999999999752 57888999999999999999999 99999999999999
Q ss_pred CCCCCceECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcc
Q 002186 821 DENMEPHLAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKP 895 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~ 895 (955)
+.++.+||+|||+++....... ........|.+||......++.++|||||||++|||+| |+.|+..... .
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-~--- 266 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-E--- 266 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-H---
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-H---
Confidence 9999999999999875443211 11113345788898888888999999999999999999 8888763221 0
Q ss_pred ccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 896 IDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.....+......... ......+.+++..||+.||++|||++|+++.|+++
T Consensus 267 --~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 267 --ELFKLLKEGHRMDKP---ANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp --HHHHHHHHTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --HHHHHHhcCCCCCCC---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011111110000001 12234577889999999999999999999999865
No 148
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=324.91 Aligned_cols=242 Identities=19% Similarity=0.252 Sum_probs=178.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||.+..... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 11 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 11 EDFK--VGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp GGEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccce--eeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 4455 778999999999999985 6899999999975322 24678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999975 368899999999999999999999 9999999999999999999999999998765422
Q ss_pred CCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 841 DGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 841 ~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
... ...++..|.+||......++.++||||+||++|||+||+.||........ ........ ...+. ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~------~~~~~~~~-~~~~~---~~ 235 (278)
T 3cok_A 166 HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT------LNKVVLAD-YEMPS---FL 235 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----------CCSSC-CCCCT---TS
T ss_pred CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH------HHHHhhcc-cCCcc---cc
Confidence 211 12245567888988888889999999999999999999999874332111 01111110 00011 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 236 SIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 245678999999999999999999986
No 149
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=331.37 Aligned_cols=252 Identities=19% Similarity=0.214 Sum_probs=188.6
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc------hHHHHHHHHHHHhcc---CCCCceeEeEEEEcC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT------RIKIVSEFITRIGTV---RHKNLIRLLGFCYNR 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~------~~~~~~~e~~~l~~l---~H~niv~l~g~~~~~ 758 (955)
++|. ..+.||+|+||+||+|+. .+|+.||||+++.... ....+.+|+++++++ +|||||+++++|...
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 9 SRYE--PVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp -CCE--EEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cceE--EEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 3465 888999999999999995 6899999999964221 134556677776655 599999999999875
Q ss_pred C-----eeEEEEeecCCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 759 H-----QAYLLYDYLPNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 759 ~-----~~~lv~ey~~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
. ..++||||++ |+|.+++... .++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5899999997 6999999763 68899999999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCCC-cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------C
Q 002186 830 EFGFKYLTQLADGSF-PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------N 893 (955)
Q Consensus 830 DfGl~~~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~ 893 (955)
|||+++......... ..++..|.+||......++.++||||+||++|||+||+.||....... .
T Consensus 163 Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242 (308)
T ss_dssp SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred eCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999987654332222 235667889999988889999999999999999999999986432110 0
Q ss_pred ccccccc-cccccccccCC-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 894 KPIDGLL-GEMYNENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 894 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
|...... ...+.+..... ....++....+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 0000000 00000000000 00001223567889999999999999999999864
No 150
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.4e-36 Score=324.81 Aligned_cols=248 Identities=17% Similarity=0.153 Sum_probs=195.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
++.+.|. ..+.||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++||||++++++|.+.+..++
T Consensus 6 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 6 DINQYYT--LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp CHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhEE--eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 3445676 788999999999999995 468899999997643 346678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~ 838 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~ 160 (277)
T 3f3z_A 84 VMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160 (277)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceecc
Confidence 9999999999998865 568889999999999999999999 99999999999999 788999999999987654
Q ss_pred ccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 839 LADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 839 ~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
..... ...++..|.+||...+. ++.++||||+||++|||+||+.||...... .....+..............
T Consensus 161 ~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 233 (277)
T 3f3z_A 161 PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVMLKIREGTFTFPEKDWLN 233 (277)
T ss_dssp TTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCCCCCCHHHHTT
T ss_pred CccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCCCCCCchhhhc
Confidence 33221 22355668888987654 889999999999999999999998643211 01111111110000000012
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 234 VSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp SCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2356788999999999999999999985
No 151
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-35 Score=342.97 Aligned_cols=312 Identities=19% Similarity=0.148 Sum_probs=229.5
Q ss_pred cccceeecCCC---------CcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccC
Q 002186 64 SWSGVKCNKNN---------TIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISR 134 (955)
Q Consensus 64 ~w~gv~C~~~~---------~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~ 134 (955)
.|..|.|.... ..+..++++++.+.+..+..+.. +++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~--l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFAS--FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTT--CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccC--CCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 46788887532 24678999999999877777766 89999999999999999999999999999999999
Q ss_pred CcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 135 NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 135 N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
|++++..+..|.++++|++|||++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+
T Consensus 90 n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 90 NRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp SCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred CcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99998777789999999999999999999999999999999999999999999999999999999999999999998777
Q ss_pred hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCc
Q 002186 215 AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT 294 (955)
Q Consensus 215 ~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 294 (955)
..+..+++|+.|++++|.+.+..+..+.++++|++|++++|.+.+.+|.......+|++|++++|+++...+..|..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 78888888888888888877766666777777777777777666666555544555666666666655433344555555
Q ss_pred cCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCC
Q 002186 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVST 374 (955)
Q Consensus 295 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~ 374 (955)
|+.|+|++|++++..+..|..+++|+.|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 55555555555554444555555555555555555544444444444454444444444433333333333344444433
Q ss_pred Ccc
Q 002186 375 NNF 377 (955)
Q Consensus 375 N~l 377 (955)
|.+
T Consensus 330 N~l 332 (477)
T 2id5_A 330 NPL 332 (477)
T ss_dssp SCE
T ss_pred CCc
Confidence 333
No 152
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.4e-36 Score=329.91 Aligned_cols=250 Identities=19% Similarity=0.245 Sum_probs=187.1
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
|. ..+.||+|+||.||+|+... .||||+++... ...+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 26 y~--~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~ 100 (289)
T 3og7_A 26 IT--VGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQW 100 (289)
T ss_dssp CE--EEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEEC
T ss_pred ee--eeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEe
Confidence 55 77899999999999998643 59999997533 2356788999999999999999999976 45668999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 999999999964 468889999999999999999999 9999999999999999999999999998754321111
Q ss_pred ---CcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 844 ---FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 844 ---~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
...++..|.+||... ...++.++||||+||++|||+||+.||........ ...........+. . ......
T Consensus 178 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~-~--~~~~~~ 253 (289)
T 3og7_A 178 QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGRGSLSPD-L--SKVRSN 253 (289)
T ss_dssp ------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHHTSCCCC-T--TSSCTT
T ss_pred cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcccccCcc-h--hhcccc
Confidence 112455678888875 55678899999999999999999999874332110 0000000111111 0 111122
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
....+.+++.+||+.||++|||++|+++.|+++..
T Consensus 254 ~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 254 CPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 33567889999999999999999999999998764
No 153
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-36 Score=361.68 Aligned_cols=240 Identities=15% Similarity=0.175 Sum_probs=189.9
Q ss_pred hccCCCCCceEEEeC---CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 698 EAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.||+|+||.||+|.. .++..||||+++... ...+.+.+|+++|++++|||||+++|+|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 699999999999975 356789999997642 346788999999999999999999999987 56899999999999
Q ss_pred hhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-----
Q 002186 773 LSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF----- 844 (955)
Q Consensus 773 L~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~----- 844 (955)
|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 9999964 468999999999999999999999 99999999999999999999999999997653322111
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
......|.+||+.....++.++|||||||++|||+| |+.||....... ....+........+ ......+.
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p---~~~~~~l~ 569 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECP---PECPPELY 569 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH------HHHHHHTTCCCCCC---TTCCHHHH
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH------HHHHHHcCCCCCCC---CcCCHHHH
Confidence 112234788999988899999999999999999998 988886433211 11111111101111 12335677
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+++..||+.||++||+++||++.|+.+
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 899999999999999999999998764
No 154
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.3e-36 Score=334.15 Aligned_cols=242 Identities=14% Similarity=0.118 Sum_probs=186.0
Q ss_pred hcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... .....+.+|++++++++|||||++++++.+.+.
T Consensus 18 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 18 CFE--LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GEE--EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HeE--EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 465 788999999999999985 589999999997542 224457789999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.|+||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999975 467888889999999999999999 99999999999999999999999999987533
Q ss_pred ccCC--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 839 LADG--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 839 ~~~~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.... ....++..|.+||......++.++||||+||++|||+||+.||...... .....+.... ...++
T Consensus 173 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~~~i~~~~-~~~p~--- 242 (327)
T 3a62_A 173 HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK------KTIDKILKCK-LNLPP--- 242 (327)
T ss_dssp ------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHTC-CCCCT---
T ss_pred cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH------HHHHHHHhCC-CCCCC---
Confidence 2211 1223556688999988888899999999999999999999998743211 1111111111 11111
Q ss_pred HHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.....+.+++.+||+.||++|| +++|++++
T Consensus 243 ~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 243 YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 1234577889999999999999 78888763
No 155
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.6e-36 Score=340.20 Aligned_cols=253 Identities=13% Similarity=0.115 Sum_probs=195.8
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++...+ ..++|||||+
T Consensus 13 i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~ 92 (396)
T 4eut_A 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCP 92 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCT
T ss_pred EEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCC
Confidence 778999999999999995 469999999997533 23567789999999999999999999998755 7899999999
Q ss_pred CCChhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECccccccccccc
Q 002186 770 NGNLSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 770 ~gsL~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~~~~~~ 840 (955)
+|+|.+++... .++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 93 ~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~ 169 (396)
T 4eut_A 93 CGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169 (396)
T ss_dssp TEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred CCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence 99999999762 78899999999999999999999 99999999999999 78888999999999765433
Q ss_pred CCC-CcccccccCchhhhhc--------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc--ccccccccc------
Q 002186 841 DGS-FPAKIAWTESGEFYNA--------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK--PIDGLLGEM------ 903 (955)
Q Consensus 841 ~~~-~~~~~~~~~~~e~~~~--------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~--~~~~~~~~~------ 903 (955)
... ...++..|.+||+... ..++.++|||||||++|||+||+.||......... .........
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (396)
T 4eut_A 170 EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAIS 249 (396)
T ss_dssp GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCE
T ss_pred CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccch
Confidence 221 1224566888888764 46778899999999999999999998642221110 000000000
Q ss_pred -----------ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 904 -----------YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 904 -----------~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.................+.+++.+||+.||++|||++|+++.++.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 250 GVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp EEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 00000000112245566788999999999999999999999988765
No 156
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.8e-36 Score=324.93 Aligned_cols=247 Identities=17% Similarity=0.193 Sum_probs=194.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++||||+++++++.+++..++|
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 6 DNYD--VKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhh--hhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3455 788999999999999985 5799999999975432 345678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECcccccccccc
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQL 839 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DfGl~~~~~~ 839 (955)
|||+++|+|.+.+.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999988865 468889999999999999999999 9999999999999986655 99999999865543
Q ss_pred cCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 840 ADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 840 ~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
... ....+...|.+||...+..++.++||||+||++|||++|+.||....... ............ ..+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~----~~~~~~~~ 234 (284)
T 3kk8_A 161 SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR--LYAQIKAGAYDY----PSPEWDTV 234 (284)
T ss_dssp SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCCC----CTTTTTTS
T ss_pred CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhH--HHHHHHhccccC----Cchhhccc
Confidence 222 11235566889999988889999999999999999999999986432110 000000011000 01111122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...+.+++.+||+.||++|||++|++++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 3457789999999999999999999863
No 157
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.7e-36 Score=341.61 Aligned_cols=243 Identities=12% Similarity=-0.017 Sum_probs=172.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHH---HHHhccCCCCceeEe-------EEEEcC-
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNR- 758 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~- 758 (955)
..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+ +.+++ +|||||+++ +++..+
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~ 144 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQS 144 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETT
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCC
Confidence 788999999999999994 589999999998643 2345667774 45555 799988755 455433
Q ss_pred ----------------CeeEEEEeecCCCChhHHhhc---CCCHHHH------HHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 759 ----------------HQAYLLYDYLPNGNLSEKIRT---KRDWAAK------YKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 759 ----------------~~~~lv~ey~~~gsL~~~l~~---~~~~~~~------~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
...|+|||||+ |+|.+++.. ...+..+ ..++.|+++||+|||+. +|+||||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrDi 220 (371)
T 3q60_A 145 QPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGHF 220 (371)
T ss_dssp SCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCcC
Confidence 23799999999 899999975 3455555 77889999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSL 891 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~ 891 (955)
||+|||++.++.+||+|||+++.......... ....|.+||.... ..++.++|||||||++|||+||+.||......
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~-~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~ 299 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGPASS-VPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPG 299 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEEGGG-SCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTT
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCccCcc-CCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcc
Confidence 99999999999999999999976543221122 2366889999876 67899999999999999999999999854322
Q ss_pred CCccccc-cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 892 QNKPIDG-LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 892 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....... ......... .. .+........+.+++.+||+.||++|||++|+++
T Consensus 300 ~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 300 IKGSWKRPSLRVPGTDS-LA-FGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CTTCCCBCCTTSCCCCS-CC-CTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred cccchhhhhhhhccccc-cc-hhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1111110 000000000 00 1111122356778999999999999999999975
No 158
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=4.1e-36 Score=324.43 Aligned_cols=246 Identities=19% Similarity=0.235 Sum_probs=189.5
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC-CeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-HQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-~~~~lv~ey~ 768 (955)
.|. ..+.||+|+||.||+|.. +|+.||||.++... ..+.+.+|++++++++|||||++++++.+. +..++||||+
T Consensus 22 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 22 ELK--LLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GEE--EEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hce--EEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 355 788999999999999987 58999999997543 456788999999999999999999997654 4789999999
Q ss_pred CCCChhHHhhcC----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 769 PNGNLSEKIRTK----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 769 ~~gsL~~~l~~~----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
++|+|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 174 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccccccCC
Confidence 999999999752 68888999999999999999999 99999999999999999999999999987543322211
Q ss_pred cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
.....|.+||......++.++||||+||++|||+| |+.|+..... . .....+......... ......+.
T Consensus 175 -~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-~-----~~~~~~~~~~~~~~~---~~~~~~l~ 244 (278)
T 1byg_A 175 -KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-K-----DVVPRVEKGYKMDAP---DGCPPAVY 244 (278)
T ss_dssp --CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-G-----GHHHHHTTTCCCCCC---TTCCHHHH
T ss_pred -CccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-H-----HHHHHHhcCCCCCCc---ccCCHHHH
Confidence 23345788999888889999999999999999999 8888764321 1 011111111001001 12234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+++.+||+.||++|||++|+++.|+.++.
T Consensus 245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 245 EVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 88899999999999999999999988754
No 159
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-36 Score=327.91 Aligned_cols=245 Identities=17% Similarity=0.195 Sum_probs=191.5
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee-EEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA-YLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~-~lv~ey 767 (955)
..+.||+|+||+||+|... ++..||||+++... ...+.+.+|++++++++|||||++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 5688999999999999842 33479999987533 2356788999999999999999999999876654 999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC---
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD--- 841 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~--- 841 (955)
+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 105 MCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp CTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred ccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 999999999975 457888999999999999999999 99999999999999999999999999987542211
Q ss_pred ---CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 842 ---GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 842 ---~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
.....+...|.+||...+..++.++||||+||++|||+||+.|+......... .............. ..
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~ 253 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL-----THFLAQGRRLPQPE---YC 253 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGH-----HHHHHTTCCCCCCT---TC
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHH-----HHHhhcCCCCCCCc---cc
Confidence 11122345578889988888999999999999999999988777644322110 00111111011111 12
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++|||++|+++.|+++
T Consensus 254 ~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~ 285 (298)
T 3pls_A 254 PDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285 (298)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 24577889999999999999999999998865
No 160
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.6e-36 Score=335.81 Aligned_cols=253 Identities=20% Similarity=0.250 Sum_probs=195.8
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~e 766 (955)
..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 78899999999999998 3578999999997543 335668899999999999999999999874 567899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 183 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY 183 (327)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSE
T ss_pred ecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecccCCcc
Confidence 9999999999965 478999999999999999999998 999999999999999999999999999876533221
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCC--------CCccccccccccccccccC
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL--------QNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 910 (955)
....+...|.+||...+..++.++||||+||++|||+||+.|+...... ..........+.......
T Consensus 184 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 262 (327)
T 3lxl_A 184 YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQR- 262 (327)
T ss_dssp EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCC-
T ss_pred ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccC-
Confidence 1112344578899888888899999999999999999999987632110 000000000000111000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
.+........+.+++.+||+.||++|||++|++++|+.+..
T Consensus 263 -~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 263 -LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred -CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 01112233567789999999999999999999999987643
No 161
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.2e-36 Score=333.18 Aligned_cols=251 Identities=19% Similarity=0.240 Sum_probs=194.8
Q ss_pred hhhhccCCCCCceEEEeC-----CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcC--CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVL-----PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR--HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-----~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~--~~~~lv~ 765 (955)
..+.||+|+||.||++.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+. ...++||
T Consensus 35 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 114 (318)
T 3lxp_A 35 KIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVM 114 (318)
T ss_dssp EEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEE
T ss_pred hhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEE
Confidence 778899999999988753 378999999997643 2356788999999999999999999999874 6789999
Q ss_pred eecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--
Q 002186 766 DYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
||+++|+|.+++.. ..++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 191 (318)
T 3lxp_A 115 EYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY 191 (318)
T ss_dssp CCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEE
T ss_pred ecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccccc
Confidence 99999999999976 568999999999999999999999 999999999999999999999999999876543221
Q ss_pred ---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCC----CCcccc----ccccccccccccCC
Q 002186 843 ---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSL----QNKPID----GLLGEMYNENEVGS 911 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~----~~~~~~----~~~~~~~~~~~~~~ 911 (955)
....++..|.+||......++.++||||+||++|||+||+.|+...... ..+... ....+.......
T Consensus 192 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 269 (318)
T 3lxp_A 192 RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER-- 269 (318)
T ss_dssp EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--
T ss_pred ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccC--
Confidence 1122344578899988888899999999999999999999987632100 000000 000111111100
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 270 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 011122335678899999999999999999999999876
No 162
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.3e-36 Score=329.31 Aligned_cols=245 Identities=18% Similarity=0.228 Sum_probs=195.4
Q ss_pred HhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc--------
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN-------- 757 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-------- 757 (955)
+...|. ..+.||+|+||.||+|... +|+.||||+++... +.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFK--EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEE--EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccc--eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 345566 8889999999999999965 89999999997543 346688999999999999999999864
Q ss_pred --------CCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 758 --------RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 758 --------~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
.+..++||||+++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 160 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQ 160 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCC
Confidence 3458999999999999999964 468889999999999999999999 9999999999999999999
Q ss_pred ceECcccccccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
+||+|||+++........ ...+...|.+||...+..++.++|||||||++|||+||+.|+..... ......
T Consensus 161 ~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--------~~~~~~ 232 (284)
T 2a19_B 161 VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK--------FFTDLR 232 (284)
T ss_dssp EEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH--------HHHHHH
T ss_pred EEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH--------HHHHhh
Confidence 999999998765433221 22245568899999888899999999999999999999887642110 000111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
... . ... ....+.+++.+||+.||++|||+.|+++.|..++..
T Consensus 233 ~~~-~--~~~---~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 233 DGI-I--SDI---FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp TTC-C--CTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred ccc-c--ccc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 111 1 111 123466888999999999999999999999877543
No 163
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.6e-36 Score=345.05 Aligned_cols=251 Identities=15% Similarity=0.134 Sum_probs=187.7
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGF 754 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~ 754 (955)
..+.+.|. ..+.||+|+||+||+|.. .+|+.||||++..... ....+.+|++++++++|||||+++++
T Consensus 131 ~~~~~~y~--~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 208 (419)
T 3i6u_A 131 KALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 208 (419)
T ss_dssp HHHHTTEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred hhhhccEE--EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 44556676 888999999999999984 5789999999975321 12247789999999999999999999
Q ss_pred EEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceEC
Q 002186 755 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLA 829 (955)
Q Consensus 755 ~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~ 829 (955)
+.. +..++|||||++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.+ ..+||+
T Consensus 209 ~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 209 FDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp EES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred Eec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 865 557999999999999999865 568899999999999999999999 99999999999999754 459999
Q ss_pred cccccccccccCC-CCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 830 EFGFKYLTQLADG-SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 830 DfGl~~~~~~~~~-~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
|||+++....... ....++..|.+||+.. ...++.++||||+||++|||+||+.||........ ... .+..
T Consensus 285 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~--~~~---~i~~ 359 (419)
T 3i6u_A 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD---QITS 359 (419)
T ss_dssp CSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC--HHH---HHHT
T ss_pred ecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH--HHH---HHhc
Confidence 9999976543221 1223566688899874 35678899999999999999999999874332111 000 1100
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+.........+.+++.+||+.||++|||++|++++
T Consensus 360 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 00000001111234567899999999999999999999874
No 164
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=3.6e-37 Score=338.42 Aligned_cols=252 Identities=16% Similarity=0.142 Sum_probs=189.5
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCC-
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRH- 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~- 759 (955)
.+.++|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++.+++++|||||++++++...+
T Consensus 9 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 86 (311)
T 3ork_A 9 HLSDRYE--LGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETP 86 (311)
T ss_dssp EETTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEET
T ss_pred eecCcEE--EEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCC
Confidence 3345566 888999999999999994 6899999999975422 2456789999999999999999999987654
Q ss_pred ---eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 760 ---QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 760 ---~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
..|+||||+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 34999999999999999975 578899999999999999999999 9999999999999999999999999998
Q ss_pred ccccccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 835 YLTQLADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 835 ~~~~~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
+........ ...++..|.+||...+..++.++||||+||++|||+||+.||....... ...........
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~------~~~~~~~~~~~ 237 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS------VAYQHVREDPI 237 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH------HHHHHHHCCCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHhcCCCC
Confidence 754332211 1124566889999988889999999999999999999999986432110 00011111100
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHhh
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEAL-KLLS 948 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~-~~L~ 948 (955)
...........++.+++.+||+.||++||++.+++ ..+.
T Consensus 238 ~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 238 PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 00000011235677899999999999999776665 3443
No 165
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=3.5e-36 Score=334.88 Aligned_cols=241 Identities=16% Similarity=0.131 Sum_probs=192.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+.. +|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 21 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 21 DFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp TEE--EEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred HcE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 355 7889999999999999964 68999999997532 2345677889999887 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 9999999999999975 678889999999999999999999 99999999999999999999999999987532221
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|.+||+.....++.++||||+||++|||+||+.||...... .....+.... ...+. ...
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~s 245 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED------ELFQSIMEHN-VAYPK---SMS 245 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSC
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH------HHHHHHHhCC-CCCCC---CCC
Confidence 11223567788999998888999999999999999999999998743211 1111111111 11111 123
Q ss_pred HHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPS-----MEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt-----~~ev~~ 945 (955)
.++.+++.+||+.||++||+ ++|+.+
T Consensus 246 ~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 246 KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 45778899999999999995 577764
No 166
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.9e-36 Score=349.79 Aligned_cols=241 Identities=13% Similarity=0.072 Sum_probs=186.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|. ..+|+.||||+++... .....+.+|++++++++|||||+++++|.+.+..++|
T Consensus 149 ~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 149 EFE--YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred HcE--EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 355 78899999999999998 4689999999997532 2244567889999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||++|+|.+++.. ..++.....++.|+++||+|||+ . +|+||||||+|||++.++.+||+|||+++......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 303 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG 303 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence 999999999999965 56888999999999999999998 7 99999999999999999999999999987532221
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++..|.+||+..+..++.++|||||||++|||+||+.||...... .....+.... ...+. ...
T Consensus 304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~------~~~~~i~~~~-~~~p~---~~~ 373 (446)
T 4ejn_A 304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE------KLFELILMEE-IRFPR---TLG 373 (446)
T ss_dssp ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSC
T ss_pred cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCC
Confidence 1 1223566789999998889999999999999999999999998643211 1111111111 11111 122
Q ss_pred HHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRP-----SMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RP-----t~~ev~~ 945 (955)
..+.+++.+||+.||++|| +++|+++
T Consensus 374 ~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 374 PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 4577889999999999999 9999986
No 167
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.4e-36 Score=346.71 Aligned_cols=246 Identities=17% Similarity=0.099 Sum_probs=192.6
Q ss_pred hcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+.. +|+.||||+++.... ..+.+.+|+.++.+++|||||+++++|.+++..|+|
T Consensus 75 ~y~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 75 DFE--ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred heE--EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 455 7889999999999999964 688999999975321 233478899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 153 ~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp ECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 999999999999975 568888999999999999999999 99999999999999999999999999987553322
Q ss_pred C---CCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccCCC
Q 002186 842 G---SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVGSS 912 (955)
Q Consensus 842 ~---~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 912 (955)
. ....++++|.+||+.. ...++.++|||||||++|||+||+.||....... ....+.... ....+
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~------~~~~i~~~~~~~~~p 303 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKERFQFP 303 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCCCC
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH------HHHhhhhccccccCC
Confidence 1 1223667788999886 4568889999999999999999999997432111 111111100 00001
Q ss_pred CchHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSD--RPSMEEALKL 946 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~--RPt~~ev~~~ 946 (955)
.........+.+++.+|+..+|++ ||+++|++++
T Consensus 304 ~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 304 TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 111112345678888899888888 9999999864
No 168
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=2.3e-36 Score=336.58 Aligned_cols=241 Identities=20% Similarity=0.253 Sum_probs=190.5
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||+++++|.+++..++
T Consensus 54 ~~y~--~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 54 KLFS--DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhee--eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 3455 778899999999999984 689999999997532 124568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||++ |++.+.+.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 132 v~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp EEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred EEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 999997 788888753 578999999999999999999999 9999999999999999999999999998765432
Q ss_pred CCCCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccc-cccCCCCchH
Q 002186 841 DGSFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE-NEVGSSSSLQ 916 (955)
Q Consensus 841 ~~~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 916 (955)
. ...++..|.+||+.. ...++.++|||||||++|||+||+.||....... ....+... .+.....
T Consensus 208 ~--~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~--- 276 (348)
T 1u5q_A 208 N--SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS------ALYHIAQNESPALQSG--- 276 (348)
T ss_dssp C--CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCCT---
T ss_pred C--cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH------HHHHHHhcCCCCCCCC---
Confidence 2 223556688899874 4568889999999999999999999986432111 00011110 0000011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+++.+||+.||++|||++|++++
T Consensus 277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 122456788899999999999999999864
No 169
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.3e-36 Score=327.78 Aligned_cols=248 Identities=20% Similarity=0.229 Sum_probs=191.1
Q ss_pred cchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc-CCeeEEEE
Q 002186 693 STECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN-RHQAYLLY 765 (955)
Q Consensus 693 ~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~-~~~~~lv~ 765 (955)
+...+.||+|+||.||+|+.. ++..||||.++... ...+.+.+|++++++++|||||+++++|.+ ++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 337788999999999999853 23468999987532 235678899999999999999999999754 56789999
Q ss_pred eecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 766 DYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
||+++|+|.++++. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 107 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 107 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp ECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred eCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 99999999999965 357888999999999999999999 999999999999999999999999999875432211
Q ss_pred ------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 843 ------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 843 ------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
....++..|.+||...+..++.++||||+||++|||+||+.|+........... ..........+.
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--- 255 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV-----YLLQGRRLLQPE--- 255 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH-----HHHTTCCCCCCT---
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH-----HHhcCCCCCCCc---
Confidence 111233457889998888899999999999999999997666554332221110 111111010011
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.....+.+++.+||+.||++|||++|+++.|+++.
T Consensus 256 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 256 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11245778899999999999999999999998763
No 170
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.8e-36 Score=328.63 Aligned_cols=246 Identities=18% Similarity=0.165 Sum_probs=186.3
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhc-cCCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGT-VRHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~-l~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++.+ .+|||||++++++.+++..++||||+++|+|
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 98 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI 98 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcH
Confidence 6799999999999994 589999999997543 235678899999988 5799999999999999999999999999999
Q ss_pred hHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECcccccccccccCC------
Q 002186 774 SEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEFGFKYLTQLADG------ 842 (955)
Q Consensus 774 ~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~DfGl~~~~~~~~~------ 842 (955)
.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++. +||+|||+++.......
T Consensus 99 ~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 175 (316)
T 2ac3_A 99 LSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPIST 175 (316)
T ss_dssp HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------
T ss_pred HHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccc
Confidence 999975 568888999999999999999999 9999999999999998766 99999999865432111
Q ss_pred ---CCcccccccCchhhhhc-----cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC-Cccccc--------ccccccc
Q 002186 843 ---SFPAKIAWTESGEFYNA-----MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ-NKPIDG--------LLGEMYN 905 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~~-----~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~-~~~~~~--------~~~~~~~ 905 (955)
....++..|.+||.... ..++.++||||+||++|||+||+.||....... .|.... ....+..
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 255 (316)
T 2ac3_A 176 PELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255 (316)
T ss_dssp ------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH
T ss_pred cccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc
Confidence 11124556888888764 457889999999999999999999997543211 111110 0111111
Q ss_pred ccccCCCC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. ...+. ........+.+++.+||+.||++|||++|++++
T Consensus 256 ~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 256 GK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11 10000 001123567899999999999999999999874
No 171
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=334.91 Aligned_cols=239 Identities=16% Similarity=0.149 Sum_probs=185.9
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCC--CCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRH--KNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H--~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++| ||||++++++.+++..++||| +.
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CC
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CC
Confidence 7889999999999999999999999999975332 34678899999999987 999999999999999999999 56
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC----
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS---- 843 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~---- 843 (955)
+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++........
T Consensus 92 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 92 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp SEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----------
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCC
Confidence 7899999976 467888999999999999999999 999999999999997 578999999999765432211
Q ss_pred CcccccccCchhhhhc-----------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc-CC
Q 002186 844 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 911 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 911 (955)
...++++|.+||+... ..++.++|||||||++|||+||+.||....... .......++... ..
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-----~~~~~~~~~~~~~~~ 242 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIEF 242 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHCTTSCCCC
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHH-----HHHHHHhcCCcccCC
Confidence 1235667889998764 568889999999999999999999986422110 011111111100 01
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.. ....+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~---~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 243 PDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccc---CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111 12356788999999999999999999864
No 172
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.1e-36 Score=339.99 Aligned_cols=250 Identities=12% Similarity=0.068 Sum_probs=189.3
Q ss_pred hcccchhhhccCCCCCceEEEeCCC------CcEEEEEEeecccch------------HHHHHHHHHHHhccCCCCceeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPT------GITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~------g~~vAvK~~~~~~~~------------~~~~~~e~~~l~~l~H~niv~l 751 (955)
.|. ..+.||+|+||.||+|...+ ++.||||++...... ...+.+|+..+++++|||||++
T Consensus 36 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 36 AWK--VGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp EEE--EEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred eEE--EEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 455 88899999999999998643 578999998754311 1123455667788899999999
Q ss_pred eEEEEcC----CeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--C
Q 002186 752 LGFCYNR----HQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--E 822 (955)
Q Consensus 752 ~g~~~~~----~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~ 822 (955)
++++... ...++||||+ +|+|.+++.. .+++.++..|+.|++.||+|||+. +|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCC
Confidence 9999764 4589999999 9999999975 468999999999999999999999 999999999999999 8
Q ss_pred CCCceECcccccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 823 NMEPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 823 ~~~~ki~DfGl~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
++.+||+|||+++....... ....++..|.+||+..+..++.++|||||||++|||+||+.||........
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~ 269 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPK 269 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHH
Confidence 89999999999976433211 111255668899999888899999999999999999999999974222111
Q ss_pred cccc------ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 894 KPID------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 894 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.... .......++. .. . .....++.+++..||+.||++||+++++++.|+.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~-~~-~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 270 YVRDSKIRYRENIASLMDKC-FP-A---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHHHHHHHCHHHHHHHH-SC-T---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHh-cc-c---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1000 0000111100 00 0 01134577888999999999999999999988754
No 173
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=6.2e-36 Score=323.90 Aligned_cols=246 Identities=18% Similarity=0.176 Sum_probs=193.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc-------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT-------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
+.|. ..+.||+|+||.||+|... +|+.||||.++.... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 5 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 5 DHYE--MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhh--hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3465 7789999999999999965 799999999975321 25678899999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC----CceECccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM----EPHLAEFGFK 834 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~----~~ki~DfGl~ 834 (955)
.++||||+++++|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~ 159 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159 (283)
T ss_dssp EEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccc
Confidence 9999999999999999965 578999999999999999999999 999999999999998877 7999999998
Q ss_pred ccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 835 YLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 835 ~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
......... ...+...|.+||......++.++|||||||++|||+||+.||....... ....+..........
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~ 233 (283)
T 3bhy_A 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE------TLTNISAVNYDFDEE 233 (283)
T ss_dssp EECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTCCCCCHH
T ss_pred eeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH------HHHHhHhcccCCcch
Confidence 765332211 1224556888999888889999999999999999999999986432110 011110000000000
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 234 YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 01122345778999999999999999999986
No 174
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-35 Score=346.57 Aligned_cols=250 Identities=16% Similarity=0.171 Sum_probs=197.6
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
..+.+.|. ..+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+.+.
T Consensus 18 g~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 95 (486)
T 3mwu_A 18 GTFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSS 95 (486)
T ss_dssp CHHHHHEE--EEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred CChhcceE--EeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCE
Confidence 34556777 888999999999999995 48999999999653 2345678899999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC---CCCCceECcccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD---ENMEPHLAEFGFKY 835 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~---~~~~~ki~DfGl~~ 835 (955)
.++|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++
T Consensus 96 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 172 (486)
T 3mwu_A 96 FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (486)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence 9999999999999998864 568889999999999999999999 999999999999995 45679999999987
Q ss_pred cccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 836 LTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 836 ~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
....... ....++++|.+||+..+ .++.++||||+||++|||+||+.||...... .....+.........+.
T Consensus 173 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~ 245 (486)
T 3mwu_A 173 CFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY------DILKRVETGKYAFDLPQ 245 (486)
T ss_dssp TBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCSCSGG
T ss_pred ECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCCcc
Confidence 6543322 12236677889998875 5889999999999999999999998743211 01111111110111112
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+......+.+++.+||+.||++|||+.|++++
T Consensus 246 ~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22334567799999999999999999999974
No 175
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.3e-36 Score=343.41 Aligned_cols=231 Identities=17% Similarity=0.140 Sum_probs=180.1
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHH---HHHhccCCCCceeEe-------EEEEcCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFI---TRIGTVRHKNLIRLL-------GFCYNRH 759 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~---~~l~~l~H~niv~l~-------g~~~~~~ 759 (955)
..+.||+|+||+||+|+. .+|+.||||++... ....+.+.+|+ +.+++++|||||+++ +++.+++
T Consensus 77 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 156 (377)
T 3byv_A 77 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 156 (377)
T ss_dssp EEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTT
T ss_pred EcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccC
Confidence 678999999999999995 67999999999742 22356788999 556677899999998 7776554
Q ss_pred e-----------------eEEEEeecCCCChhHHhhc--CC-------CHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 760 Q-----------------AYLLYDYLPNGNLSEKIRT--KR-------DWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 760 ~-----------------~~lv~ey~~~gsL~~~l~~--~~-------~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
. .|+||||+ +|+|.+++.. .. ++..+..|+.|+++||+|||+. +|+||||
T Consensus 157 ~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDi 232 (377)
T 3byv_A 157 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 232 (377)
T ss_dssp SCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCC
Confidence 2 79999999 6899999975 22 2577788999999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhhhcc-----------CCcccccchhHHHHHHHHHhCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-----------KEEMYMDVYGFGEIILEILTNG 882 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~-----------~~~~~~DV~S~Gvvl~Elltg~ 882 (955)
||+|||++.++.+||+|||+++....... ...+ ..|.+||+.... .++.++|||||||++|||+||+
T Consensus 233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~ 310 (377)
T 3byv_A 233 RPVDIVLDQRGGVFLTGFEHLVRDGARVV-SSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCAD 310 (377)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTCEEE-CCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CHHHEEEcCCCCEEEEechhheecCCccc-CCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCC
Confidence 99999999999999999999875432211 2224 668899998877 7899999999999999999999
Q ss_pred CCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 883 RLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 883 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.||........ ........ . .....+.+++.+||+.||++|||+.|+++
T Consensus 311 ~Pf~~~~~~~~------~~~~~~~~-----~---~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 311 LPITKDAALGG------SEWIFRSC-----K---NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp CCC------CC------SGGGGSSC-----C---CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred CCCcccccccc------hhhhhhhc-----c---CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99874332111 11111110 1 11245778899999999999999999985
No 176
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.5e-36 Score=337.02 Aligned_cols=239 Identities=16% Similarity=0.141 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccC--CCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++ |||||++++++..++..|+||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 788999999999999998889999999997532 23567889999999997 5999999999999999999999 56
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC----C
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG----S 843 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~----~ 843 (955)
+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++....... .
T Consensus 139 ~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~ 214 (390)
T 2zmd_A 139 NIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKD 214 (390)
T ss_dssp SEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------C
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCC
Confidence 8899999975 457888899999999999999998 999999999999996 57899999999976543221 1
Q ss_pred CcccccccCchhhhhc-----------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc-CC
Q 002186 844 FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV-GS 911 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 911 (955)
...++++|.+||+... ..++.++|||||||++|||+||+.||....... ..+..+.++... ..
T Consensus 215 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~-----~~~~~~~~~~~~~~~ 289 (390)
T 2zmd_A 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNHEIEF 289 (390)
T ss_dssp CSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-----HHHHHHHCTTSCCCC
T ss_pred CCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH-----HHHHHHhCccccCCC
Confidence 2235677889998764 368889999999999999999999986432110 111112211101 00
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+... ...+.+++.+||+.||++|||++|++++
T Consensus 290 ~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 290 PDIP---EKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Cccc---hHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 1111 2457788999999999999999999863
No 177
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2e-36 Score=362.39 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=190.3
Q ss_pred hhccCCCCCceEEEeC---CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 697 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
+.||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++|||||+++++|.. +..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999999964 4678999999976432 35778999999999999999999999975 457899999999
Q ss_pred CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC----
Q 002186 771 GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF---- 844 (955)
Q Consensus 771 gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~---- 844 (955)
|+|.++++. ..++.++..|+.||++||+|||+. +|+||||||+|||++.++.+||+|||+++.........
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999975 468999999999999999999999 99999999999999999999999999997654322111
Q ss_pred -cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 -~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
..++..|.+||+.....++.++|||||||++|||+| |+.||....... ....+........+ .....++
T Consensus 531 ~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~------~~~~i~~~~~~~~p---~~~~~~l 601 (635)
T 4fl3_A 531 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE------VTAMLEKGERMGCP---AGCPREM 601 (635)
T ss_dssp ----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH------HHHHHHTTCCCCCC---TTCCHHH
T ss_pred CCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHcCCCCCCC---CCCCHHH
Confidence 112344788999988899999999999999999999 998886432110 00111111101111 1233567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+++..||+.||++|||+++|+++|+.+
T Consensus 602 ~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 602 YDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 7899999999999999999999999864
No 178
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=8.6e-36 Score=338.26 Aligned_cols=252 Identities=17% Similarity=0.163 Sum_probs=192.4
Q ss_pred hcccchhhhccCC--CCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARP--QSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g--~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+|. ..+.||+| +||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.+++..++
T Consensus 26 ~y~--~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 26 CYE--LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GEE--EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cEE--EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 455 88899999 9999999995 489999999997643 234567889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
|||||++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 9999999999999964 468888999999999999999999 999999999999999999999999998754321
Q ss_pred cC---------CCCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc--cccccccccc
Q 002186 840 AD---------GSFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI--DGLLGEMYNE 906 (955)
Q Consensus 840 ~~---------~~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~--~~~~~~~~~~ 906 (955)
.. .....++..|.+||.... ..++.++||||+||++|||+||+.||........... ........+.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 11 111234555788898876 5789999999999999999999999975332211000 0000000000
Q ss_pred cc----------------------------------cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 NE----------------------------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ~~----------------------------------~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. ....+........+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 00000111223568899999999999999999999864
No 179
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.8e-36 Score=337.05 Aligned_cols=238 Identities=16% Similarity=0.106 Sum_probs=183.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHH-HhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|..+ ++.++|||||++++++.+.+..|+
T Consensus 39 ~y~--~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 39 DFH--FLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GEE--EEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred heE--EEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 366 888999999999999995 4789999999976432 23344555665 577899999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.+++.+ ..++.+...++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~ 193 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN 193 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccCC
Confidence 9999999999999975 467888889999999999999999 99999999999999999999999999987533222
Q ss_pred --CCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 --GSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 --~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
.....+++.|.+||+..+..++.++||||+||++|||+||+.||..... ......+.... ....+. ..
T Consensus 194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~-~~~~~~---~~ 263 (373)
T 2r5t_A 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILNKP-LQLKPN---IT 263 (373)
T ss_dssp CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHHSC-CCCCSS---SC
T ss_pred CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHhcc-cCCCCC---CC
Confidence 1222356778999999888899999999999999999999999864321 11111121111 111111 22
Q ss_pred HHHHHHHHHccCCCCCCCCCHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEE 942 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~e 942 (955)
..+.+++.+||+.||++||++.+
T Consensus 264 ~~~~~li~~lL~~dp~~R~~~~~ 286 (373)
T 2r5t_A 264 NSARHLLEGLLQKDRTKRLGAKD 286 (373)
T ss_dssp HHHHHHHHHHTCSSGGGSTTTTT
T ss_pred HHHHHHHHHHcccCHHhCCCCCC
Confidence 45678889999999999999853
No 180
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.9e-36 Score=323.23 Aligned_cols=241 Identities=17% Similarity=0.170 Sum_probs=173.8
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++.+++++||||+++++++.+.+..++
T Consensus 13 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (275)
T 2eue_A 13 GNYQ--IVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIM 90 (275)
T ss_dssp CCBC--CCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEE
T ss_pred cceE--EEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEE
Confidence 3455 788999999999999984 589999999996532 225578899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+ +|++.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 91 v~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 91 VIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred Eehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 99999 6788888765 568889999999999999999999 99999999999999999999999999987544322
Q ss_pred C-CCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++..|.+||...+..+ +.++||||+||++|||+||+.||...... .....+.... ...+. ...
T Consensus 167 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~~~~~~-~~~~~---~~~ 236 (275)
T 2eue_A 167 FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLFKNISNGV-YTLPK---FLS 236 (275)
T ss_dssp --------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTC-CCCCT---TSC
T ss_pred cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCC-CCCCc---cCC
Confidence 1 12224556888898876554 68899999999999999999998643211 0011111111 11111 122
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+||+.||++|||++|+++
T Consensus 237 ~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 237 PGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 45678899999999999999999975
No 181
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.3e-36 Score=328.02 Aligned_cols=249 Identities=18% Similarity=0.188 Sum_probs=195.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+.+.|. ..+.||+|+||.||+|+. .+|+.||||+++.... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 6 NIRKTFI--FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp CHHHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred chhccce--eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 3445676 788999999999999995 4899999999975432 34568899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~ 838 (955)
||||+++|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 160 (304)
T 2jam_A 84 VMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ 160 (304)
T ss_dssp EECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred EEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence 9999999999999864 568888999999999999999999 99999999999999 788999999999987543
Q ss_pred ccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 839 LADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
........++..|.+||......++.++||||+||++|||+||+.||...... .....+.........+.....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~~~~ 234 (304)
T 2jam_A 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES------KLFEKIKEGYYEFESPFWDDI 234 (304)
T ss_dssp CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHCCCCCCTTTTTTS
T ss_pred CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHcCCCCCCccccccC
Confidence 32222222456688999988888999999999999999999999998643211 001111111000001111223
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
...+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 235 SESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp CHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 356778999999999999999999986
No 182
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.7e-36 Score=343.70 Aligned_cols=245 Identities=14% Similarity=0.077 Sum_probs=191.8
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|++++.+++|||||++++++.+++..|+|
T Consensus 62 ~f~--~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 62 DFE--ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GEE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hEE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 455 788999999999999996 589999999997532 1234578899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 765 YDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||++|+|.+++.+ ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 140 mE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp ECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 999999999999975 568888899999999999999998 99999999999999999999999999997654332
Q ss_pred C---CCcccccccCchhhhh-------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc-ccC
Q 002186 842 G---SFPAKIAWTESGEFYN-------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN-EVG 910 (955)
Q Consensus 842 ~---~~~~~~~~~~~~e~~~-------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~ 910 (955)
. ....+++.|.+||+.. ...++.++|||||||++|||+||+.||....... ....+.... ...
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~------~~~~i~~~~~~~~ 290 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE------TYGKIVHYKEHLS 290 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTHHHHCC
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH------HHHHHHhcccCcC
Confidence 1 1223567788999886 3467899999999999999999999997532111 111111100 000
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDR---PSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~R---Pt~~ev~~~ 946 (955)
.+........++.+++.+||. +|++| |+++|++++
T Consensus 291 ~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 291 LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 011111223567788999999 99998 699999763
No 183
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.8e-36 Score=352.06 Aligned_cols=245 Identities=15% Similarity=0.106 Sum_probs=195.6
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|.. .+|+.||||++.... .....+.+|++++++++|||||++++++.+.+..|+||
T Consensus 186 f~--~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 186 FR--QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp EE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eE--EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 55 778899999999999985 589999999997532 23456788999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
|||++|+|.+++.. ..++.....++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 99999999999975 268889999999999999999999 99999999999999999999999999997654322
Q ss_pred C-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHH
Q 002186 842 G-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIK 920 (955)
Q Consensus 842 ~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 920 (955)
. ....+++.|.+||+..+..++.++||||+||++|||+||+.||........ .......+. ..+...+ .....
T Consensus 341 ~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~i~~~i~-~~~~~~p---~~~s~ 414 (576)
T 2acx_A 341 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVK-EVPEEYS---ERFSP 414 (576)
T ss_dssp CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHHHHHHHH-HCCCCCC---TTSCH
T ss_pred cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHHHHHHhh-cccccCC---ccCCH
Confidence 2 122356778999999888899999999999999999999999975332110 000111111 1101111 12234
Q ss_pred HHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 921 LVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 921 ~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
.+.+++.+||+.||++|| +++||+++
T Consensus 415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 577889999999999999 78888753
No 184
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.7e-36 Score=336.84 Aligned_cols=192 Identities=16% Similarity=0.180 Sum_probs=167.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-----CCCceeEeEEEEcCCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~g~~~~~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||+++......+.+..|++++++++ |||||++++++...+..+
T Consensus 35 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~ 112 (360)
T 3llt_A 35 NAFL--VIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMC 112 (360)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEE
T ss_pred CEEE--EEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeE
Confidence 4466 888999999999999995 58999999999765555667778899998886 999999999999999999
Q ss_pred EEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC----------------
Q 002186 763 LLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---------------- 822 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---------------- 822 (955)
+||||+ +|+|.+++.. ..++.+...++.|++.||+|||+. +|+||||||+|||++.
T Consensus 113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~ 188 (360)
T 3llt_A 113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVTDG 188 (360)
T ss_dssp EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccccc
Confidence 999999 8999999975 367888999999999999999999 9999999999999985
Q ss_pred ---------CCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCC
Q 002186 823 ---------NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNA 887 (955)
Q Consensus 823 ---------~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~ 887 (955)
++.+||+|||+++........ ..++..|.+||+..+..++.++||||+||++|||+||+.||..
T Consensus 189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~-~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 189 KKIQIYRTKSTGIKLIDFGCATFKSDYHGS-IINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CEEEEEEESCCCEEECCCTTCEETTSCCCS-CCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccCCCCEEEEeccCceecCCCCcC-ccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 788999999999764433222 2345668899999888999999999999999999999999874
No 185
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-36 Score=332.77 Aligned_cols=244 Identities=19% Similarity=0.261 Sum_probs=189.0
Q ss_pred hhhhccCCCCCceEEEeCCC-----CcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVLPT-----GITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~-----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|.... +..||||+++... .....+.+|++++++++|||||++++++.+.+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 56889999999999998532 3469999997543 2345688999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 128 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 204 (333)
T 1mqb_A 128 MENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT 204 (333)
T ss_dssp CTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----------
T ss_pred CCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccccccc
Confidence 999999999975 468899999999999999999999 99999999999999999999999999987654322111
Q ss_pred -----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHH
Q 002186 845 -----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDE 918 (955)
Q Consensus 845 -----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (955)
...+..|.+||......++.++|||||||++|||+| |+.||...... .....+.+....... ...
T Consensus 205 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~~~~~~~~~~---~~~ 275 (333)
T 1mqb_A 205 YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH------EVMKAINDGFRLPTP---MDC 275 (333)
T ss_dssp ------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTTCCCCCC---TTC
T ss_pred cccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH------HHHHHHHCCCcCCCc---ccC
Confidence 112345788999888889999999999999999999 88888643210 111111111101111 122
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 919 IKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 919 ~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
...+.+++.+||+.||++||+++|+++.|+.+
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 34577889999999999999999999998765
No 186
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-36 Score=341.10 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=185.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccC-CCCceeEeEEEEcCC-
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRH- 759 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~- 759 (955)
.+.++|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++.+++ |||||++++++..++
T Consensus 6 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~ 83 (388)
T 3oz6_A 6 HVLRKYE--LVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADND 83 (388)
T ss_dssp HHHTTEE--EEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTS
T ss_pred cccCceE--EEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCC
Confidence 4456676 888999999999999984 68999999998643 223556778999999997 999999999998654
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+|||||+ |+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 84 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 159 (388)
T 3oz6_A 84 RDVYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSF 159 (388)
T ss_dssp SCEEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred CEEEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence 6899999997 699999875 568888899999999999999999 9999999999999999999999999998754
Q ss_pred cccC-----------------------CCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 838 QLAD-----------------------GSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 838 ~~~~-----------------------~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
.... .....++++|.+||+..+ ..++.++||||+||++|||+||+.||.+......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~ 239 (388)
T 3oz6_A 160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239 (388)
T ss_dssp SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred cccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 2210 011235677899998865 6789999999999999999999999975432110
Q ss_pred cccc-cccc--------ccccc---------------cccCCCCchH-------------HHHHHHHHHHHHccCCCCCC
Q 002186 894 KPID-GLLG--------EMYNE---------------NEVGSSSSLQ-------------DEIKLVLDVALLCTRSTPSD 936 (955)
Q Consensus 894 ~~~~-~~~~--------~~~~~---------------~~~~~~~~~~-------------~~~~~~~~l~~~Cl~~dp~~ 936 (955)
.... .... ....+ .........+ .....+.+++.+||+.||++
T Consensus 240 ~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~ 319 (388)
T 3oz6_A 240 LERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNK 319 (388)
T ss_dssp HHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCccc
Confidence 0000 0000 00000 0000000000 12346789999999999999
Q ss_pred CCCHHHHHHH
Q 002186 937 RPSMEEALKL 946 (955)
Q Consensus 937 RPt~~ev~~~ 946 (955)
|||++|++++
T Consensus 320 R~t~~e~l~H 329 (388)
T 3oz6_A 320 RISANDALKH 329 (388)
T ss_dssp SCCHHHHTTS
T ss_pred CCCHHHHhCC
Confidence 9999999875
No 187
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.9e-36 Score=335.94 Aligned_cols=248 Identities=21% Similarity=0.251 Sum_probs=193.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---------hHHHHHHHHHHHhcc-CCCCceeEeEEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---------RIKIVSEFITRIGTV-RHKNLIRLLGFCY 756 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l-~H~niv~l~g~~~ 756 (955)
.+.|. ..+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 93 ~~~y~--~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 93 YQKYD--PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhcc--cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34455 7789999999999999964 899999999875321 134577899999998 7999999999999
Q ss_pred cCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 757 NRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 757 ~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
..+..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999999975 578899999999999999999999 9999999999999999999999999998
Q ss_pred ccccccCC-CCcccccccCchhhhhc------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccc
Q 002186 835 YLTQLADG-SFPAKIAWTESGEFYNA------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNEN 907 (955)
Q Consensus 835 ~~~~~~~~-~~~~~~~~~~~~e~~~~------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 907 (955)
........ ....++..|.+||+..+ ..++.++|||||||++|||+||+.||....... ....+....
T Consensus 248 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~------~~~~i~~~~ 321 (365)
T 2y7j_A 248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQIL------MLRMIMEGQ 321 (365)
T ss_dssp EECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTC
T ss_pred cccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHH------HHHHHHhCC
Confidence 76543222 12235566888898753 257889999999999999999999986432110 011111110
Q ss_pred ccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 908 EVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 908 ~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+......+.+++.+||+.||++|||++|+++.
T Consensus 322 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 322 YQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000111223457789999999999999999999863
No 188
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.1e-35 Score=328.41 Aligned_cols=249 Identities=17% Similarity=0.226 Sum_probs=195.9
Q ss_pred hcccchhhhccCCCCCceEEEeCC------CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP------TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~------~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+|. ..+.||+|+||.||+|+.. +++.||||++..... ....+.+|++++++++||||+++++++.+.+..
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 26 KIT--MSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hee--eeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 455 7889999999999999753 578899999975432 345688999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRT------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
++||||+++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEEEC
Confidence 999999999999999964 247888999999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++........ ...+...|.+||...+..++.++||||+||++|||+| |+.|+..... . .....+.
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~-----~~~~~~~ 254 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-E-----QVLRFVM 254 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-H-----HHHHHHH
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-H-----HHHHHHH
Confidence 99998754332211 1123445788999888889999999999999999999 6777653221 0 0111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
........ ......+.+++.+||+.||++|||++|+++.|+.+..
T Consensus 255 ~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 255 EGGLLDKP---DNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cCCcCCCC---CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 11101001 1223457788999999999999999999999987643
No 189
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.9e-36 Score=322.29 Aligned_cols=247 Identities=17% Similarity=0.171 Sum_probs=191.7
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+.. ++..||||.++... ...+.+.+|++++++++||||+++++++.+ +..++
T Consensus 13 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 13 DVV--LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GEE--EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ceE--EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 355 7788999999999999842 34579999997542 245678899999999999999999999865 45689
Q ss_pred EEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 764 LYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 9999999999999965 368889999999999999999999 9999999999999999999999999998765432
Q ss_pred CC---CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 841 DG---SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 841 ~~---~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.. ....+...|.+||......++.++|||||||++|||+| |+.||....... ...............
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~------~~~~~~~~~~~~~~~--- 237 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD------VIGVLEKGDRLPKPD--- 237 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG------HHHHHHHTCCCCCCT---
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH------HHHHHhcCCCCCCCC---
Confidence 21 11123345788999888889999999999999999999 999886332111 000110000011111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.....+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 12245778899999999999999999999998753
No 190
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=328.43 Aligned_cols=253 Identities=20% Similarity=0.245 Sum_probs=191.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
++|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 3 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 3 EKYE--KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp CCEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccce--EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 3455 778999999999999996 4699999999865332 245678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp EECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999998865 468888999999999999999999 999999999999999999999999999876543221
Q ss_pred C--CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-ccccc-------------cccc
Q 002186 843 S--FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG-------------EMYN 905 (955)
Q Consensus 843 ~--~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~~~~-------------~~~~ 905 (955)
. ...++.+|.+||...+ ..++.++||||+||++|||+||+.||........... ..... ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (311)
T 4agu_A 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFS 237 (311)
T ss_dssp --------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGT
T ss_pred ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccc
Confidence 1 1235566888898765 5679999999999999999999999874332110000 00000 0000
Q ss_pred ccccCCCC---ch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGSSS---SL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~~~---~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+... .. +.....+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 238 GVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000 00 1223457889999999999999999999864
No 191
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-34 Score=328.90 Aligned_cols=310 Identities=17% Similarity=0.144 Sum_probs=217.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.|++++|.++...+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..++++++|++|+
T Consensus 44 l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 123 (390)
T 3o6n_A 44 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 123 (390)
T ss_dssp GCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEE
Confidence 67899999999999876666678899999999999999988888999999999999999999988888899999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.++...+..|+++++|++|++++|.+++..|..+..+++|++|++++|.+++. .++.+++|++|++++|.+++
T Consensus 124 L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~ 200 (390)
T 3o6n_A 124 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 200 (390)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred CCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc
Confidence 999999865555578999999999999999887787888888888888888877653 24566777777777776653
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+...++|++|++++|.+..... ...++|+.|++++|++++. ..+..+++|+.|++++|.+++..|..+..
T Consensus 201 -----~~~~~~L~~L~l~~n~l~~~~~---~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~ 270 (390)
T 3o6n_A 201 -----LAIPIAVEELDASHNSINVVRG---PVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVK 270 (390)
T ss_dssp -----EECCSSCSEEECCSSCCCEEEC---CCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----cCCCCcceEEECCCCeeeeccc---cccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccc
Confidence 2334566777777776665422 1235566666666666643 35556666666666666666555555656
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|++++ +|..+..+++|+.|++++|.+. .+|..+..+++|+.|+
T Consensus 271 l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~l~~L~~L~ 324 (390)
T 3o6n_A 271 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-------------------------HVERNQPQFDRLENLY 324 (390)
T ss_dssp CSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-------------------------CCGGGHHHHTTCSEEE
T ss_pred cccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-------------------------ecCccccccCcCCEEE
Confidence 6666666666665553 3333444455555555555443 1233344556666666
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTG 451 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 451 (955)
+++|+++.. | +..+++|+.|++++|++.+
T Consensus 325 L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 325 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred CCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 666666543 2 4556666666666666553
No 192
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.2e-36 Score=336.48 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=193.3
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
|. ..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++|||||++++++.+++..++||||
T Consensus 35 y~--~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 35 FE--KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp EE--EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ce--eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 55 778899999999999995 489999999997642 2356788999999999999999999999999999999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCCc
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSFP 845 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~ 845 (955)
+++|+|.+++.. ..++.....++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++..........
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 190 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF 190 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCC
Confidence 999999999976 5688889999999999999999831 799999999999999999999999999865433322223
Q ss_pred ccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-cc---------------------------
Q 002186 846 AKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-ID--------------------------- 897 (955)
Q Consensus 846 ~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~~--------------------------- 897 (955)
.++..|.+||+..+..++.++|||||||++|||+||+.||.......... ..
T Consensus 191 ~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (360)
T 3eqc_A 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMD 270 (360)
T ss_dssp CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC---------------------------
T ss_pred CCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccC
Confidence 35566889999988889999999999999999999999986432100000 00
Q ss_pred --------ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 898 --------GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 898 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
............... .......+.+++.+||+.||++|||++|+++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 271 SRPPMAIFELLDYIVNEPPPKLP--SGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ---CCCHHHHHHHHHHSCCCCCC--TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCcccchhhhhHHhccCCCCCC--cccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 000000000000000 0112345788999999999999999999986
No 193
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.8e-36 Score=330.91 Aligned_cols=244 Identities=17% Similarity=0.233 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEeC-CCCcE----EEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGIT----VSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~----vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+.||+|+||.||+|.. .+|+. ||+|.+... ....+.+.+|++++++++|||||+++++|.+++ .++||||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~ 97 (327)
T 3lzb_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQL 97 (327)
T ss_dssp EEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECC
T ss_pred EEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEe
Confidence 788999999999999984 45654 577776542 234677889999999999999999999998765 7899999
Q ss_pred cCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC
Q 002186 768 LPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF 844 (955)
Q Consensus 768 ~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~ 844 (955)
+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 98 ~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~ 174 (327)
T 3lzb_A 98 MPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp CSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence 999999999965 467888999999999999999999 99999999999999999999999999997653322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..++..|.+||...+..++.++||||+||++|||+| |+.||....... ....+. ......... ...
T Consensus 175 ~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~~~~---~~~~~~~~~---~~~ 245 (327)
T 3lzb_A 175 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISSILE---KGERLPQPP---ICT 245 (327)
T ss_dssp -----CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHHHHH---TTCCCCCCT---TBC
T ss_pred cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HHHHHH---cCCCCCCCc---cCC
Confidence 112345788999888889999999999999999999 888886432111 000010 000011111 123
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMA 277 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 45778899999999999999999999998764
No 194
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.2e-36 Score=331.77 Aligned_cols=249 Identities=21% Similarity=0.221 Sum_probs=194.7
Q ss_pred hcccchhhhccCCCCCceEEEe------CCCCcEEEEEEeecccc--hHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC-
Q 002186 690 SFNSTECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGAT--RIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH- 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~- 759 (955)
.|. ..+.||+|+||.||+|. ..+|+.||||+++.... ..+.+.+|++++.++ +|||||+++++|..++
T Consensus 28 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 28 RLK--LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GEE--EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hee--eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 355 77899999999999997 35688999999976432 345788999999999 7999999999998754
Q ss_pred eeEEEEeecCCCChhHHhhcC------------------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC
Q 002186 760 QAYLLYDYLPNGNLSEKIRTK------------------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD 821 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~~------------------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~ 821 (955)
..++||||+++|+|.+++... .++..+..++.|+++||+|||+. +|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEEC
Confidence 589999999999999999753 56888899999999999999999 999999999999999
Q ss_pred CCCCceECcccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccc
Q 002186 822 ENMEPHLAEFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPI 896 (955)
Q Consensus 822 ~~~~~ki~DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~ 896 (955)
.++.+||+|||+++........ ...++..|.+||......++.++||||+||++|||+| |+.||....... ...
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HHH
Confidence 9999999999998755332221 1123445888999888889999999999999999999 888876432111 000
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
. ............ .....+.+++..||+.||++|||++|++++|+.+.
T Consensus 262 -~---~~~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 262 -R---RLKEGTRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp -H---HHHHTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -H---HhccCccCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 010000010011 12245778889999999999999999999998753
No 195
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.1e-36 Score=328.04 Aligned_cols=244 Identities=19% Similarity=0.252 Sum_probs=183.4
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----eeE
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH-----QAY 762 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~-----~~~ 762 (955)
..+.||+|+||.||+|... +++.||||+++... ...+.+.+|++.+++++||||+++++++.+.+ ..+
T Consensus 38 ~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 117 (313)
T 3brb_A 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPM 117 (313)
T ss_dssp EEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEE
T ss_pred eccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccE
Confidence 7788999999999999743 46689999997532 23456889999999999999999999998754 359
Q ss_pred EEEeecCCCChhHHhhc--------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 118 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 118 VILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp EEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred EEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 99999999999999842 468899999999999999999998 9999999999999999999999999998
Q ss_pred ccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccccccccc
Q 002186 835 YLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 835 ~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
+....... ....+...|.+||......++.++|||||||++|||+| |..|+....... ...........
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~------~~~~~~~~~~~ 268 (313)
T 3brb_A 195 KKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE------MYDYLLHGHRL 268 (313)
T ss_dssp ----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG------HHHHHHTTCCC
T ss_pred eecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHHcCCCC
Confidence 75433211 11123445778899888889999999999999999999 666765332111 11111111101
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.........+.+++.+||+.||++|||++|++++|+++
T Consensus 269 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 269 ---KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp ---CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11112234677899999999999999999999999875
No 196
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=5.1e-36 Score=331.78 Aligned_cols=247 Identities=23% Similarity=0.298 Sum_probs=192.4
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcE--EEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~--vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|.. ||||+++... ...+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 26 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 26 DIK--FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GCE--EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred Hcc--ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 355 778999999999999985 46665 4999987532 2345688999999999 89999999999999999999
Q ss_pred EEeecCCCChhHHhhc------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC
Q 002186 764 LYDYLPNGNLSEKIRT------------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME 825 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~------------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~ 825 (955)
||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 9999999999999965 357888999999999999999999 9999999999999999999
Q ss_pred ceECcccccccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccccccccc
Q 002186 826 PHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+||+|||+++........ .......|.+||......++.++||||+||++|||+| |+.||...... .....+
T Consensus 181 ~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~------~~~~~~ 254 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA------ELYEKL 254 (327)
T ss_dssp EEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHG
T ss_pred EEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH------HHHHHh
Confidence 999999998643322211 1123345788898888888999999999999999999 98888643211 011111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......... ......+.+++.+||+.||++|||++|+++.|+.+
T Consensus 255 ~~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 255 PQGYRLEKP---LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp GGTCCCCCC---TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCCCCCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111001001 11234577899999999999999999999998865
No 197
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.5e-35 Score=346.80 Aligned_cols=248 Identities=17% Similarity=0.203 Sum_probs=191.9
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.+.+.|. ..+.||+|+||+||+|+. .+|..||||++.... ...+.+.+|++++++++|||||+++++|.+.+..
T Consensus 34 ~~~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 111 (494)
T 3lij_A 34 HLSEMYQ--RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNY 111 (494)
T ss_dssp CHHHHEE--EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred chhcCeE--EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEE
Confidence 3445576 788999999999999995 489999999997532 2356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~ 836 (955)
++|||||++|+|.+.+.. ..++.....++.|+++||+|||+. +|+||||||+|||++.. +.+||+|||+++.
T Consensus 112 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 112 YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999999998865 568888999999999999999999 99999999999999764 5599999999876
Q ss_pred ccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
...... ....++++|.+||+.. ..++.++||||+||++|||+||+.||...... .....+.........+.+
T Consensus 189 ~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~~~~~~~~~~~ 261 (494)
T 3lij_A 189 FENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------EILRKVEKGKYTFDSPEW 261 (494)
T ss_dssp CBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCCSGGG
T ss_pred CCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCCCCchhc
Confidence 543322 1223567788999876 46889999999999999999999998743211 011111111101011112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 262 KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 223456778999999999999999999985
No 198
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.6e-36 Score=327.03 Aligned_cols=253 Identities=13% Similarity=0.077 Sum_probs=191.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~ 762 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++.+++++||||+++++++..++..+
T Consensus 33 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 2h34_A 33 FGPYR--LRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY 110 (309)
T ss_dssp -CCEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eccEE--EEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence 34465 788999999999999995 4799999999975422 2467889999999999999999999999999999
Q ss_pred EEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc
Q 002186 763 LLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~ 840 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 111 VDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999975 578899999999999999999999 9999999999999999999999999998654332
Q ss_pred CCC---CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 841 DGS---FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 841 ~~~---~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
... ...+...|.+||......++.++|||||||++|||+||+.||...... ............. . .....
T Consensus 188 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~~~~~~~-~---~~~~~ 260 (309)
T 2h34_A 188 KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS---VMGAHINQAIPRP-S---TVRPG 260 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH---HHHHHHHSCCCCG-G---GTSTT
T ss_pred ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH---HHHHHhccCCCCc-c---ccCCC
Confidence 211 122455678899888888899999999999999999999998643211 0000010100000 0 00112
Q ss_pred HHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhccCC
Q 002186 918 EIKLVLDVALLCTRSTPSDRP-SMEEALKLLSGLKP 952 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RP-t~~ev~~~L~~~~~ 952 (955)
....+.+++.+||+.||++|| +++|+++.|+....
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 234577888999999999999 99999999986543
No 199
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.4e-36 Score=323.14 Aligned_cols=241 Identities=15% Similarity=0.163 Sum_probs=190.8
Q ss_pred hhccCCCCCceEEEeC---CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVL---PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++++++||||+++++++. .+..++||||+++|
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 94 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 94 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEEEeCCCC
Confidence 3899999999999984 368899999997642 34567889999999999999999999994 45689999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-----
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS----- 843 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~----- 843 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 95 ~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 171 (287)
T 1u59_A 95 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 171 (287)
T ss_dssp EHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCC
T ss_pred CHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccc
Confidence 99999964 468899999999999999999999 9999999999999999999999999998765332211
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
...++..|.+||......++.++|||||||++|||+| |+.||....... ....+........+ ......+
T Consensus 172 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~i~~~~~~~~~---~~~~~~l 242 (287)
T 1u59_A 172 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE------VMAFIEQGKRMECP---PECPPEL 242 (287)
T ss_dssp SSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH------HHHHHHTTCCCCCC---TTCCHHH
T ss_pred cccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH------HHHHHhcCCcCCCC---CCcCHHH
Confidence 1112345788898888888999999999999999999 998886432211 00011110001111 1223467
Q ss_pred HHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 923 LDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.+++..||+.||++||+++|++++|+.+
T Consensus 243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 243 YALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 7889999999999999999999999865
No 200
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.2e-34 Score=347.39 Aligned_cols=311 Identities=17% Similarity=0.138 Sum_probs=242.1
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+..++.|++++|.+....+..|.++++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..|..|+++++|++|+
T Consensus 50 l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 129 (597)
T 3oja_B 50 LNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLV 129 (597)
T ss_dssp GCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEE
Confidence 67899999999999877777788999999999999999998888999999999999999999998888899999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..+..|+++++|++|+|++|.+++..|..++.+++|++|++++|.+.+. .++.+++|++|++++|.+++
T Consensus 130 L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~ 206 (597)
T 3oja_B 130 LERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST 206 (597)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE
T ss_pred eeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc
Confidence 999999976666789999999999999999988888888899999999988888764 25567778888888887764
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +.++..+++|+.|++++|.+++..|..+..
T Consensus 207 -----l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 276 (597)
T 3oja_B 207 -----LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVK 276 (597)
T ss_dssp -----EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTT
T ss_pred -----ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcC
Confidence 334456777888877776544322 2467777777777765 356667777777777777777666666777
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++ +|..+..+++|+.|++++|.++ .+|..+..+++|+.|+
T Consensus 277 l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-------------------------~i~~~~~~l~~L~~L~ 330 (597)
T 3oja_B 277 MQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-------------------------HVERNQPQFDRLENLY 330 (597)
T ss_dssp CSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-------------------------CCGGGHHHHTTCSEEE
T ss_pred ccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-------------------------ccCcccccCCCCCEEE
Confidence 7777777777776665 3444555666666666666554 2344566678888888
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGG 452 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 452 (955)
|++|++++. | +..+++|+.|++++|.+.+.
T Consensus 331 L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 331 LDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 888888754 2 66778888888888887753
No 201
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=331.81 Aligned_cols=252 Identities=18% Similarity=0.263 Sum_probs=193.9
Q ss_pred hhhhccCCCCCceEEEe-----CCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCC--eeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAV-----LPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH--QAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-----~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~--~~~lv~e 766 (955)
..+.||+|+||.||+|+ ..+|+.||||++.... ...+.+.+|++++++++|||||++++++...+ ..++|||
T Consensus 45 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 124 (326)
T 2w1i_A 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 124 (326)
T ss_dssp EEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEEC
T ss_pred eeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEE
Confidence 77899999999999998 3579999999997543 33567889999999999999999999987654 7899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG- 842 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~- 842 (955)
|+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 125 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~ 201 (326)
T 2w1i_A 125 YLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY 201 (326)
T ss_dssp CCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE
T ss_pred CCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhccccccc
Confidence 9999999999975 368899999999999999999998 999999999999999999999999999876543221
Q ss_pred ----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCC---------CCCCcccccccccccccccc
Q 002186 843 ----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS---------SLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 843 ----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~---------~~~~~~~~~~~~~~~~~~~~ 909 (955)
....+...|.+||......++.++|||||||++|||+||+.|+.... ..........+.+.......
T Consensus 202 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (326)
T 2w1i_A 202 YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281 (326)
T ss_dssp EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCC
T ss_pred cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCC
Confidence 11123344778898888888999999999999999999998875210 00000000000011111000
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
.+.......++.+++.+||+.||++|||++|+++.|+.++
T Consensus 282 --~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 282 --LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp --CCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0111122356778999999999999999999999998764
No 202
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=2.2e-35 Score=320.78 Aligned_cols=243 Identities=19% Similarity=0.197 Sum_probs=187.9
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc----CCeeEEEEe
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQAYLLYD 766 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~~~lv~e 766 (955)
....||+|+||.||+|.. .++..||+|++.... ...+.+.+|++++++++|||||++++++.. .+..++|||
T Consensus 30 ~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e 109 (290)
T 1t4h_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred eeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEE
Confidence 567899999999999985 578899999997532 235668899999999999999999999875 356899999
Q ss_pred ecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccCCC
Q 002186 767 YLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 767 y~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
|+++|+|.+++.. ..++.....++.|+++||+|||+.. ++|+||||||+||+++ .++.+||+|||++.........
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 188 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK 188 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred ecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc
Confidence 9999999999975 5688899999999999999999981 1399999999999998 7899999999998654433222
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||.... .++.++||||+||++|||+||+.||......... .........+. .........+.
T Consensus 189 ~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~-----~~~~~~~~~l~ 260 (290)
T 1t4h_A 189 AVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI--YRRVTSGVKPA-----SFDKVAIPEVK 260 (290)
T ss_dssp ESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH--HHHHTTTCCCG-----GGGGCCCHHHH
T ss_pred cccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHH--HHHHhccCCcc-----ccCCCCCHHHH
Confidence 2234556788897764 5889999999999999999999998643321110 00000000010 00111124577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|++++
T Consensus 261 ~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 261 EIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHccCChhhCCCHHHHhhC
Confidence 89999999999999999999863
No 203
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.7e-36 Score=326.40 Aligned_cols=252 Identities=10% Similarity=0.043 Sum_probs=192.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEE-EcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..+++| ...+..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp --CE--EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CceE--EeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 4566 788999999999999994 6899999998764322 23467889999999999888777766 56778899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 9999999873 578999999999999999999999 99999999999999 78899999999998765432
Q ss_pred CC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 841 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 841 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
.. ....++..|.+||...+..++.++|||||||++|||+||+.||........... ............
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~---~~~~~~~~~~~~ 238 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK---YERISEKKMSTP 238 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH---HHHHHHHHHHSC
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh---hhhhhcccccch
Confidence 21 112345568889999888899999999999999999999999975332211111 111100000000
Q ss_pred -CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 -SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 -~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..........+.+++..||+.||++|||++|+++.|+++
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 000011235678899999999999999999999998865
No 204
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.4e-36 Score=334.21 Aligned_cols=245 Identities=17% Similarity=0.191 Sum_probs=193.0
Q ss_pred hhhhccCCCCCceEEEeCC-C-----CcEEEEEEeeccc--chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLP-T-----GITVSVKKIEWGA--TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~-----g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|... + ++.||||.++... ...+.+.+|+++++++ +|||||+++++|.+.+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 7788999999999999843 3 3589999997543 2356788999999999 8999999999999999999999
Q ss_pred eecCCCChhHHhhc----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceEC
Q 002186 766 DYLPNGNLSEKIRT----------------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLA 829 (955)
Q Consensus 766 ey~~~gsL~~~l~~----------------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~ 829 (955)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 206 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIG 206 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGGEEEBC
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCCeEEEC
Confidence 99999999999864 247888899999999999999999 99999999999999999999999
Q ss_pred cccccccccccCCC----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADGS----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~~----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++........ ...++..|.+||......++.++|||||||++|||+| |..|+....... . .........
T Consensus 207 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~-~~~~~~~~~ 284 (333)
T 2i1m_A 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-K-FYKLVKDGY 284 (333)
T ss_dssp CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-H-HHHHHHHTC
T ss_pred ccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-H-HHHHHhcCC
Confidence 99998755432221 1123445788998888889999999999999999999 777776432111 0 001111111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
... ... .....+.+++..||+.||++|||++|+++.|+.+
T Consensus 285 ~~~---~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 285 QMA---QPA---FAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp CCC---CCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC---CCC---CCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 110 011 1124577899999999999999999999999865
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.9e-35 Score=331.35 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=189.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 25 KRYQ--NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhee--EeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 4566 788999999999999984 579999999997532 23456789999999999999999999998654
Q ss_pred -eeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
..++||||++ |+|.+.+....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 178 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred cceEEEEEcCC-CCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence 7899999997 589999988889999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccc----------------
Q 002186 839 LADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLL---------------- 900 (955)
Q Consensus 839 ~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~---------------- 900 (955)
.... ....++..|.+||...+..++.++||||+||++|||+||+.||........+... ...
T Consensus 179 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 179 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp -----------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH
T ss_pred cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH
Confidence 3221 1123556688999998888999999999999999999999998753321100000 000
Q ss_pred --------------cccccccccCCCC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 --------------GEMYNENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 --------------~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.........+... ........+.+++.+||+.||++|||++|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 0000000000000 112235678899999999999999999999874
No 206
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-35 Score=321.08 Aligned_cols=241 Identities=15% Similarity=0.189 Sum_probs=194.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 15 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 15 DFD--IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hce--eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 355 788999999999999985 478899999996532 1246788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR 169 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccccc
Confidence 999999999999975 568888999999999999999998 999999999999999999999999999865443222
Q ss_pred CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 843 SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 843 ~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
....+...|.+||...+..++.++||||+||++|||+||+.||....... ....+.... ...++ .....+
T Consensus 170 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~~~~ 239 (284)
T 2vgo_A 170 RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE------THRRIVNVD-LKFPP---FLSDGS 239 (284)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCT---TSCHHH
T ss_pred ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH------HHHHHhccc-cCCCC---cCCHHH
Confidence 22335566889999888888999999999999999999999986432110 011111111 11111 122456
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+|++.||++|||++|+++
T Consensus 240 ~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 240 KDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHhhcCHhhCCCHHHHhh
Confidence 78899999999999999999986
No 207
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.9e-36 Score=329.22 Aligned_cols=250 Identities=17% Similarity=0.210 Sum_probs=191.3
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEE----cCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY----NRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~----~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++. ..+..++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 788999999999999995 689999999986533 34567889999999999999999999997 345789999999
Q ss_pred CCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 769 PNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 769 ~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
++|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 113 ~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~ 189 (317)
T 2buj_A 113 KRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVE 189 (317)
T ss_dssp TTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEE
T ss_pred CCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhcccccc
Confidence 99999999864 368899999999999999999999 999999999999999999999999998765322111
Q ss_pred C-----------CcccccccCchhhhhcc---CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc
Q 002186 843 S-----------FPAKIAWTESGEFYNAM---KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 843 ~-----------~~~~~~~~~~~e~~~~~---~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
. ...++..|.+||..... .++.++|||||||++|||+||+.||........... ........
T Consensus 190 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~~~--- 265 (317)
T 2buj_A 190 GSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA-LAVQNQLS--- 265 (317)
T ss_dssp SHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH-HHHHCC-----
T ss_pred cccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh-HHhhccCC---
Confidence 0 01124557888887643 367899999999999999999999852110000000 00001000
Q ss_pred cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCCC
Q 002186 909 VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPHG 954 (955)
Q Consensus 909 ~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~~ 954 (955)
.+.. ......+.+++.+||+.||++|||++|+++.|+.+++..
T Consensus 266 ~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 266 IPQS---PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp CCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CCcc---ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 1101 122345778999999999999999999999999887653
No 208
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=6.8e-36 Score=325.80 Aligned_cols=252 Identities=10% Similarity=0.042 Sum_probs=194.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEE-EcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFC-YNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~-~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..++++ ...+..++|||
T Consensus 9 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 9 NRYR--LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cEEE--EEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 3455 788999999999999994 6899999999875432 34578899999999999888777766 55678899999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred ec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99 8999999973 568999999999999999999999 99999999999999 48889999999998765433
Q ss_pred CC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-ccccccccccccC
Q 002186 841 DG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLGEMYNENEVG 910 (955)
Q Consensus 841 ~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 910 (955)
.. ....++..|.+||...+..++.++|||||||++|||+||+.||............ .......... .
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~- 239 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I- 239 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-h-
Confidence 21 1223455688899998888999999999999999999999999753322111110 0000000000 0
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..........+.+++.+||+.||++|||++|+++.|+.+
T Consensus 240 -~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 240 -EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp -HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred -HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 000011235677899999999999999999999999865
No 209
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.4e-36 Score=333.23 Aligned_cols=252 Identities=17% Similarity=0.216 Sum_probs=185.4
Q ss_pred hhhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.++|. ..+.||+|+||+||+|+ ..+|+.||||+++.... ..+.+.+|++++++++|||||++++++.+++..++
T Consensus 33 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 33 IDRYR--RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp GGGEE--EEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhEE--EEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34566 88899999999999998 45899999999975432 24456789999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee-----CCCCCceECccccccc
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF-----DENMEPHLAEFGFKYL 836 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl-----~~~~~~ki~DfGl~~~ 836 (955)
||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 111 v~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 999998 599999976 468888999999999999999999 99999999999999 4555699999999876
Q ss_pred ccccCCC--CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccc
Q 002186 837 TQLADGS--FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDG 898 (955)
Q Consensus 837 ~~~~~~~--~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~ 898 (955)
....... ...++..|.+||+..+. .++.++||||+||++|||+||+.||........ |....
T Consensus 187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (329)
T 3gbz_A 187 FGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266 (329)
T ss_dssp HC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred cCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhh
Confidence 5422211 12245568889988764 579999999999999999999999874321100 00000
Q ss_pred cccccccccccCCCCchHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 899 LLGEMYNENEVGSSSSLQD-----EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.........+......... ...++.+++.+||+.||++|||++|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp GSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0000000000000011111 2356789999999999999999999986
No 210
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.6e-35 Score=317.71 Aligned_cols=247 Identities=16% Similarity=0.183 Sum_probs=194.3
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ecceE--EEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 34566 788999999999999995 479999999997533 2356788999999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD- 841 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~- 841 (955)
|||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 999999999999975 468889999999999999999999 99999999999999999999999999987543221
Q ss_pred ---CCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 842 ---GSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 842 ---~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
.....+...|.+||......+ +.++||||+||++|||+||+.||......... . ......... ......
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~----~~~~~~~~~--~~~~~~ 233 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE-Y----SDWKEKKTY--LNPWKK 233 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH-H----HHHHTTCTT--STTGGG
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH-H----HHhhhcccc--cCchhh
Confidence 111224455788888876554 77899999999999999999998753321110 0 000000000 011112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 234 IDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp SCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 23457789999999999999999999863
No 211
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8.2e-36 Score=348.50 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=196.5
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc----cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG----ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
+.+.|. ..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++.+.+..
T Consensus 24 ~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 101 (484)
T 3nyv_A 24 FSDRYK--GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYF 101 (484)
T ss_dssp HHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred ccCceE--EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 345566 788999999999999995 48999999999653 22466788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~ 836 (955)
++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.
T Consensus 102 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 102 YLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 999999999999999865 567888999999999999999999 99999999999999 4678999999999876
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...++++|.+||...+ .++.++||||+||++|||+||+.||....... ....+.........+.+
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~ 251 (484)
T 3nyv_A 179 FEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYD------ILKKVEKGKYTFELPQW 251 (484)
T ss_dssp BCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred cccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHH------HHHHHHcCCCCCCCccc
Confidence 5433221 1235677889998866 68899999999999999999999987432110 11111111101011222
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 252 KKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp GGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 233456778999999999999999999986
No 212
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.1e-35 Score=346.56 Aligned_cols=244 Identities=14% Similarity=0.112 Sum_probs=194.2
Q ss_pred cccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 187 f~--~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 187 FL--DFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp EE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 55 678899999999999996 579999999997532 23456788999999999999999999999999999999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 99999999999865 367888899999999999999999 999999999999999999999999999976543
Q ss_pred cCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHH
Q 002186 840 ADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQD 917 (955)
Q Consensus 840 ~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (955)
.... ...+++.|.+||+..+..++.++||||+||++|||+||+.||........ .......+.... ...+. .
T Consensus 342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~--~~~~~~~i~~~~-~~~p~---~ 415 (543)
T 3c4z_A 342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQRVLEQA-VTYPD---K 415 (543)
T ss_dssp TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC--HHHHHHHHHHCC-CCCCT---T
T ss_pred CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh--HHHHHHHHhhcc-cCCCc---c
Confidence 3221 12466778999999888899999999999999999999999975432111 011111111111 11111 2
Q ss_pred HHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSM-----EEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~-----~ev~~ 945 (955)
....+.+++.+||+.||++||++ +|+.+
T Consensus 416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 23456788899999999999975 66654
No 213
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.6e-35 Score=347.35 Aligned_cols=247 Identities=17% Similarity=0.204 Sum_probs=192.7
Q ss_pred HhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--------------chHHHHHHHHHHHhccCCCCceeE
Q 002186 687 VLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--------------TRIKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 687 ~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--------------~~~~~~~~e~~~l~~l~H~niv~l 751 (955)
+.+.|. ..+.||+|+||+||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++
T Consensus 34 i~~~Y~--~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~ 111 (504)
T 3q5i_A 34 IGESYF--KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKL 111 (504)
T ss_dssp GGGTEE--EEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCE
T ss_pred cccceE--EEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeE
Confidence 445566 788999999999999995 578999999997532 224568899999999999999999
Q ss_pred eEEEEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC---Cc
Q 002186 752 LGFCYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM---EP 826 (955)
Q Consensus 752 ~g~~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~---~~ 826 (955)
+++|.+.+..++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++ .+
T Consensus 112 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 112 FDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccE
Confidence 9999999999999999999999999864 578999999999999999999999 999999999999998775 69
Q ss_pred eECcccccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 827 HLAEFGFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 827 ki~DfGl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
||+|||+++....... ....++++|.+||+... .++.++||||+||++|||++|+.||...... .....+..
T Consensus 189 kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~i~~ 261 (504)
T 3q5i_A 189 KIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DIIKKVEK 261 (504)
T ss_dssp EECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHH
T ss_pred EEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHc
Confidence 9999999976543322 12235677889998764 6889999999999999999999998743211 11111111
Q ss_pred ccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 906 ENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 906 ~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.......+.+......+.+++.+||+.||++|||++|+++
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 262 GKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 1100000111122356788999999999999999999985
No 214
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=335.64 Aligned_cols=251 Identities=12% Similarity=0.045 Sum_probs=188.2
Q ss_pred hcccchhhhccCCCCCceEEEeCC----CCcEEEEEEeecccch------------HHHHHHHHHHHhccCCCCceeEeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGATR------------IKIVSEFITRIGTVRHKNLIRLLG 753 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~~------------~~~~~~e~~~l~~l~H~niv~l~g 753 (955)
.|. ..+.||+|+||.||+|... ++..||||++...... .+.+.+|+..++.++||||+++++
T Consensus 38 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 38 QWV--LGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp EEE--EEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred eEE--EEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 355 7889999999999999964 6789999998754211 223567888899999999999999
Q ss_pred EEEc----CCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC--C
Q 002186 754 FCYN----RHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM--E 825 (955)
Q Consensus 754 ~~~~----~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~--~ 825 (955)
++.. .+..++||||+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 9987 67899999999 9999999976 578999999999999999999999 999999999999999877 9
Q ss_pred ceECcccccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 826 PHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 826 ~ki~DfGl~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+||+.||......... .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~-~ 270 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA-V 270 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH-H
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH-H
Confidence 99999999976532211 1122455688899998888999999999999999999999998632211100 0
Q ss_pred cccccccccccccCCCCchH------HHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 897 DGLLGEMYNENEVGSSSSLQ------DEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
........... ..... .....+.+++..||+.||++|||++||++.|+.+.
T Consensus 271 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 271 QTAKTNLLDEL----PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp HHHHHHHHHTT----THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred HHHHHhhcccc----cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 00000000000 00000 12346788999999999999999999999998754
No 215
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-35 Score=344.53 Aligned_cols=187 Identities=17% Similarity=0.262 Sum_probs=148.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecc---cchHHHHHHHHHHHhccCCCCceeEeEEEEcC-----C
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWG---ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----H 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~ 759 (955)
+.|. ..+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|++++++++|||||++++++... +
T Consensus 53 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 53 DRYE--IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp TTEE--ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCeE--EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 4566 888999999999999984 58999999999653 22356788999999999999999999999543 5
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+||||+ +|+|.++++. .+++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 789999998 4799999976 468888999999999999999999 9999999999999999999999999999765
Q ss_pred cccCC-----------------------------CCcccccccCchhhh-hccCCcccccchhHHHHHHHHHhC
Q 002186 838 QLADG-----------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTN 881 (955)
Q Consensus 838 ~~~~~-----------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg 881 (955)
..... ....++++|.+||+. ....++.++||||+|||+|||+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 32110 011246778999975 566789999999999999999994
No 216
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1e-35 Score=323.56 Aligned_cols=243 Identities=16% Similarity=0.196 Sum_probs=189.5
Q ss_pred hhh-hccCCCCCceEEEeC---CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEee
Q 002186 695 ECE-EAARPQSAAGCKAVL---PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 695 ~~~-~~g~g~~g~vy~~~~---~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey 767 (955)
..+ .||+|+||.||+|.. .+++.||||+++.... ..+.+.+|++++++++||||+++++++ ..+..++||||
T Consensus 20 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~ 98 (291)
T 1xbb_A 20 LEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEM 98 (291)
T ss_dssp EEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEEC
T ss_pred hccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEe
Confidence 445 899999999999953 4678999999975422 256788999999999999999999999 55678999999
Q ss_pred cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 768 LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 768 ~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 99 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 175 (291)
T 1xbb_A 99 AELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 175 (291)
T ss_dssp CTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE
T ss_pred CCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc
Confidence 999999999976 468888999999999999999999 99999999999999999999999999987654322111
Q ss_pred ----cccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 845 ----PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 845 ----~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
..+...|.+||...+..++.++|||||||++|||+| |+.||....... ... .+......... ....
T Consensus 176 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~---~~~~~~~~~~~---~~~~ 246 (291)
T 1xbb_A 176 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE---VTA---MLEKGERMGCP---AGCP 246 (291)
T ss_dssp C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH---HHH---HHHTTCCCCCC---TTCC
T ss_pred ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHH---HHHcCCCCCCC---CCCC
Confidence 112244778898888888999999999999999999 888886432110 000 01000001001 1223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
..+.+++..||+.||++|||++|+++.|+.+
T Consensus 247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 247 REMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4577899999999999999999999999865
No 217
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-35 Score=328.06 Aligned_cols=241 Identities=17% Similarity=0.153 Sum_probs=189.0
Q ss_pred hhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 697 EEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
+.||+|+||.||+|.. .+|+.||||+++... .....+.+|++++.+++ ||||+++++++.+.+..++||||+++|
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~ 114 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGG 114 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCC
Confidence 7899999999999985 479999999997532 23567888999999885 699999999999999999999999999
Q ss_pred ChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccccccccccCC-C
Q 002186 772 NLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 772 sL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl~~~~~~~~~-~ 843 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... .
T Consensus 115 ~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 191 (327)
T 3lm5_A 115 EIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR 191 (327)
T ss_dssp EGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------
T ss_pred cHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc
Confidence 99999854 468899999999999999999999 9999999999999998 78999999999876543322 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...++..|.+||+.....++.++||||+||++|||+||+.||....... ....+.........+........+.
T Consensus 192 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~~~ 265 (327)
T 3lm5_A 192 EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLNISQVNVDYSEETFSSVSQLAT 265 (327)
T ss_dssp --CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHTCCCCCTTTTTTSCHHHH
T ss_pred cccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHHHHhcccccCchhhcccCHHHH
Confidence 2235566889999988889999999999999999999999986432111 0000000000000111122335577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|++++
T Consensus 266 ~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 266 DFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhCC
Confidence 88999999999999999999864
No 218
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=8e-36 Score=341.93 Aligned_cols=193 Identities=19% Similarity=0.181 Sum_probs=165.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc------CCCCceeEeEEEEcCCee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV------RHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l------~H~niv~l~g~~~~~~~~ 761 (955)
.+|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|+++++.+ +|+||+++++++...+..
T Consensus 97 ~ry~--~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYE--VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEE--EEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEE--EEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 3455 888999999999999985 5789999999986555556677788887766 577999999999999999
Q ss_pred EEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--ceECcccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME--PHLAEFGFKY 835 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~ 835 (955)
++||||++ |+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+|||+++
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 699998875 368999999999999999999999 9999999999999999887 9999999986
Q ss_pred cccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 836 LTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 836 ~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
....... ...++.+|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 251 ~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQRVY-TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCCCC-SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCccc-ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 5433222 223556688999998888999999999999999999999988643
No 219
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=1.5e-35 Score=327.94 Aligned_cols=248 Identities=15% Similarity=0.173 Sum_probs=190.1
Q ss_pred hcccchhhhccCCCCCceEEEeC------CCCcEEEEEEeecc--cchHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL------PTGITVSVKKIEWG--ATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~------~~g~~vAvK~~~~~--~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++... ......+.+|+.++++++|||||++++++.+.+..
T Consensus 31 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 31 NIT--LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GCE--EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred heE--EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 355 788999999999999983 46789999999643 23355788899999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhcC---------CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceEC
Q 002186 762 YLLYDYLPNGNLSEKIRTK---------RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLA 829 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~~---------~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~ 829 (955)
++||||+++|+|.+++... .++.++..++.|+++||+|||+. +|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999752 67888999999999999999999 9999999999999984 4569999
Q ss_pred cccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccc
Q 002186 830 EFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMY 904 (955)
Q Consensus 830 DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 904 (955)
|||+++....... ....+...|.+||......++.++|||||||++|||+| |+.|+...... .....+.
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~------~~~~~~~ 259 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ------EVLEFVT 259 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHHHHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH------HHHHHHh
Confidence 9999865432211 11123445788998888889999999999999999999 77777533210 0011111
Q ss_pred cccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccC
Q 002186 905 NENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLK 951 (955)
Q Consensus 905 ~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~ 951 (955)
........ ......+.+++.+||+.||++|||++|++++|+.+.
T Consensus 260 ~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 260 SGGRMDPP---KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp TTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCC---CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 11000001 112345778999999999999999999999988653
No 220
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-36 Score=335.63 Aligned_cols=246 Identities=15% Similarity=0.103 Sum_probs=190.4
Q ss_pred hcccchhhhccCCCCCceEEEeC----CCCcEEEEEEeeccc-----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCC
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL----PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRH 759 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~ 759 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+++++++ +||||+++++++..++
T Consensus 55 ~y~--~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 55 NFE--LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GEE--EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ceE--EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 455 888999999999999986 479999999986532 2245567789999999 6999999999999999
Q ss_pred eeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 99999999999999999975 568888999999999999999999 9999999999999999999999999998754
Q ss_pred cccCC---CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 838 QLADG---SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 838 ~~~~~---~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
..... ....++..|.+||+..+ ..++.++|||||||++|||+||+.||........ ............ .
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~-~--- 283 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS--QAEISRRILKSE-P--- 283 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC--HHHHHHHHHHCC-C---
T ss_pred ccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch--HHHHHHHHhccC-C---
Confidence 32211 11224566888998875 3478899999999999999999999874322111 011111111111 1
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRP-----SMEEALKL 946 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RP-----t~~ev~~~ 946 (955)
+........+.+++.+||+.||++|| |++|++++
T Consensus 284 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 284 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11112234567889999999999999 99999875
No 221
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.6e-36 Score=322.94 Aligned_cols=253 Identities=17% Similarity=0.185 Sum_probs=192.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAY 762 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~ 762 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++.+ .+..+
T Consensus 6 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 6 EDYE--VLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhee--eehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 3455 778999999999999985 489999999997533 235678899999999999999999998854 57899
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCC--CCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC--YPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~--~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
+||||+++|+|.+++.. ..++.....++.|+++||+|||+.. ..+|+||||||+||+++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 99999999999999965 2789999999999999999999981 012999999999999999999999999998
Q ss_pred ccccccCCC--CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 835 YLTQLADGS--FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 835 ~~~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
+........ ...+...|.+||......++.++|||||||++|||+||+.||...... .....+.........
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~~~~~~~~~ 237 (279)
T 2w5a_A 164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK------ELAGKIREGKFRRIP 237 (279)
T ss_dssp HHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHTCCCCCC
T ss_pred eeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH------HHHHHHhhcccccCC
Confidence 754322110 112345578899988888899999999999999999999998643210 011111111100001
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
. .....+.+++.+||+.||++|||++|+++.+....+
T Consensus 238 ~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 238 Y---RYSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp T---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred c---ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 1 123457788999999999999999999998765443
No 222
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=9.2e-36 Score=330.25 Aligned_cols=252 Identities=21% Similarity=0.286 Sum_probs=189.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLL 764 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv 764 (955)
++|. ..+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++|||||+++++|.+.+..++|
T Consensus 25 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 25 EKYE--NLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp GGEE--EEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhe--eeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 3465 788999999999999995 4699999999865332 245678899999999999999999999999999999
Q ss_pred EeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC
Q 002186 765 YDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 765 ~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~ 842 (955)
|||+++++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999999999888753 578999999999999999999999 999999999999999999999999999875433221
Q ss_pred --CCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc------------------cccc
Q 002186 843 --SFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID------------------GLLG 901 (955)
Q Consensus 843 --~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~------------------~~~~ 901 (955)
....+..+|.+||...+. .++.++||||+||++|||+||+.||............ ....
T Consensus 180 ~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 180 VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccc
Confidence 112345668888987664 6889999999999999999999998754321100000 0000
Q ss_pred ccccccccCCCCc---hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 EMYNENEVGSSSS---LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 ~~~~~~~~~~~~~---~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+......+. .+.....+.+++.+||+.||++|||++|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp TCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0000000000000 0123456889999999999999999999875
No 223
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-36 Score=338.84 Aligned_cols=250 Identities=14% Similarity=0.080 Sum_probs=191.6
Q ss_pred hcccchhhhccCCCCCceEEEeCC---------CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCcee----------
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLP---------TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIR---------- 750 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~---------~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~---------- 750 (955)
.|. ..+.||+|+||.||+|+.. +|+.||||.+... +.+.+|++++++++|||||+
T Consensus 43 ~y~--~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 43 QWK--LKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp EEE--EEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred eEE--EEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 455 7889999999999999865 3889999998743 35778999999999999998
Q ss_pred -----EeEEEEc-CCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee
Q 002186 751 -----LLGFCYN-RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 751 -----l~g~~~~-~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl 820 (955)
+++++.. ++..++||||+ +|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIFV 192 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEEE
T ss_pred cCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEE
Confidence 6788876 77899999999 9999999975 478999999999999999999999 99999999999999
Q ss_pred CCCC--CceECcccccccccccCC---------CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCC
Q 002186 821 DENM--EPHLAEFGFKYLTQLADG---------SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGS 889 (955)
Q Consensus 821 ~~~~--~~ki~DfGl~~~~~~~~~---------~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~ 889 (955)
+.++ .+||+|||+++....... ....++..|.+||...+..++.++|||||||++|||+||+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 899999999976443221 11134556889999988889999999999999999999999987433
Q ss_pred CCCCccccccccccccc-ccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 890 SLQNKPIDGLLGEMYNE-NEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 890 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
........ ........ ... ............+.+++.+||+.||++|||++|+++.|+.+
T Consensus 273 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 273 PNTEDIMK-QKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp TCHHHHHH-HHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cCHHHHHH-HHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 11111100 00000000 000 00000011235677889999999999999999999998865
No 224
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.1e-35 Score=330.70 Aligned_cols=237 Identities=10% Similarity=0.051 Sum_probs=186.5
Q ss_pred hhhhccCCCCCceEEEe------CCCCcEEEEEEeecccchHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAV------LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||+||+|+ ..+|+.||||+++.. ....+.+|++++++++ |+|||++++++...+..++||
T Consensus 69 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~ 146 (365)
T 3e7e_A 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVG 146 (365)
T ss_dssp EEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEE
T ss_pred EEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEE
Confidence 77899999999999994 567899999999743 3445677777777776 999999999999999999999
Q ss_pred eecCCCChhHHhhc-------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-----------CCCce
Q 002186 766 DYLPNGNLSEKIRT-------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-----------NMEPH 827 (955)
Q Consensus 766 ey~~~gsL~~~l~~-------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-----------~~~~k 827 (955)
|||++|+|.+++.. ..++..+..|+.|+++||+|||+. +|+||||||+|||++. ++.+|
T Consensus 147 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~k 223 (365)
T 3e7e_A 147 ELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLA 223 (365)
T ss_dssp CCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC------CTTEE
T ss_pred eccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccccccCCEE
Confidence 99999999999963 478999999999999999999998 9999999999999998 89999
Q ss_pred ECcccccccccccCC----CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccc
Q 002186 828 LAEFGFKYLTQLADG----SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 828 i~DfGl~~~~~~~~~----~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
|+|||+++....... ....++..|.+||+..+..++.++|||||||++|||+||+.||...... .+. ....
T Consensus 224 l~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~----~~~~ 298 (365)
T 3e7e_A 224 LIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG-ECK----PEGL 298 (365)
T ss_dssp ECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT-EEE----ECSC
T ss_pred EeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC-cee----echh
Confidence 999999965432111 1123566789999998888999999999999999999999998633211 000 1111
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhhcc
Q 002186 904 YNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR-PSMEEALKLLSGL 950 (955)
Q Consensus 904 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~R-Pt~~ev~~~L~~~ 950 (955)
... .. .. ..+.+++..|++.+|.+| |+++++.+.|+.+
T Consensus 299 ~~~-----~~-~~---~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 299 FRR-----LP-HL---DMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp CTT-----CS-SH---HHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred ccc-----cC-cH---HHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 111 11 12 234466778999999998 6788877776643
No 225
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-36 Score=331.86 Aligned_cols=248 Identities=19% Similarity=0.240 Sum_probs=183.7
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccch--HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATR--IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~--~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|... +|+.||||+++..... ...+.+|++++++++|||||++++++.+++..++||||++ |
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 84 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-K 84 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-E
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-c
Confidence 7788999999999999964 8999999999753322 1234578999999999999999999999999999999997 6
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--Ccc
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS--FPA 846 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~--~~~ 846 (955)
+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ...
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~ 161 (324)
T 3mtl_A 85 DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEV 161 (324)
T ss_dssp EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcccccccc
Confidence 99998865 367888999999999999999999 9999999999999999999999999998754332221 122
Q ss_pred cccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-ccccc--------ccccc------cc-c
Q 002186 847 KIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DGLLG--------EMYNE------NE-V 909 (955)
Q Consensus 847 ~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~~~~--------~~~~~------~~-~ 909 (955)
++.+|.+||...+ ..++.++||||+||++|||+||+.||........... ..... ..... .. .
T Consensus 162 ~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (324)
T 3mtl_A 162 VTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241 (324)
T ss_dssp -CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCC
T ss_pred CcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhccccccc
Confidence 4566888898765 5689999999999999999999999874321100000 00000 00000 00 0
Q ss_pred CCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
...... +.....+.+++.+||+.||++|||++|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp CCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 000000 1123467799999999999999999999863
No 226
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.5e-35 Score=321.56 Aligned_cols=240 Identities=15% Similarity=0.179 Sum_probs=188.6
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecc---cchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWG---ATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAY 762 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~ 762 (955)
.+.|. ..+.||+|+||.||+|... +|+.||||+++.. ......+.+|+..+.++ +|||||++++++.+++..+
T Consensus 10 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 10 TTEFH--ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cchhh--hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34566 7889999999999999964 8999999999753 22355677889999888 9999999999999999999
Q ss_pred EEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------------
Q 002186 763 LLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 822 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-------------- 822 (955)
+||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 99999999999999975 368899999999999999999999 9999999999999984
Q ss_pred -----CCCceECcccccccccccCCCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc
Q 002186 823 -----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI 896 (955)
Q Consensus 823 -----~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~ 896 (955)
...+||+|||.+....... ...++..|.+||..... .++.++|||||||++|||++|..++......
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----- 237 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ--VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQW----- 237 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC--CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHH-----
T ss_pred cccCCceEEEEcccccccccCCcc--ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHH-----
Confidence 4479999999987654322 22245557788887654 5678999999999999999998766432110
Q ss_pred cccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 897 DGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......... .+. .....+.+++.+||+.||++|||++|++++
T Consensus 238 ~~~~~~~~~~----~~~---~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 238 HEIRQGRLPR----IPQ---VLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHHTTCCCC----CSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHHcCCCCC----CCc---ccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 0000011100 011 122457788899999999999999999864
No 227
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.7e-35 Score=328.05 Aligned_cols=249 Identities=14% Similarity=0.162 Sum_probs=191.4
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEc--CCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYN--RHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~--~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|. ..+|+.||||+++.. ..+.+.+|++++++++ ||||+++++++.+ ....++||
T Consensus 37 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 37 DYQ--LVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred ceE--EEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 355 78899999999999998 468999999998743 3567889999999997 9999999999987 56789999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-CceECcccccccccccCC-C
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM-EPHLAEFGFKYLTQLADG-S 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~-~~ki~DfGl~~~~~~~~~-~ 843 (955)
||+++|+|.++++. .++.+...++.|+++||+|||+. +|+||||||+||+++.++ .+||+|||+++....... .
T Consensus 113 e~~~~~~l~~~~~~-~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~ 188 (330)
T 3nsz_A 113 EHVNNTDFKQLYQT-LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN 188 (330)
T ss_dssp ECCCCCCHHHHGGG-CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC
T ss_pred eccCchhHHHHHHh-CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc
Confidence 99999999998864 78888999999999999999999 999999999999999776 899999999976543322 2
Q ss_pred CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc--c-----cccccccc---------
Q 002186 844 FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID--G-----LLGEMYNE--------- 906 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~--~-----~~~~~~~~--------- 906 (955)
...+..+|.+||.... ..++.++||||+||++|||+||+.||..+......... . ...+..+.
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 2235566788888766 66899999999999999999999999644321100000 0 00000000
Q ss_pred ----------cc--cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 907 ----------NE--VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 907 ----------~~--~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+ .............+.+++.+||+.||++|||++|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00 00001111134568899999999999999999999973
No 228
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-35 Score=332.35 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=186.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCC-----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH----- 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~----- 759 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++++++++|||||++++++...+
T Consensus 25 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 25 AVYR--DLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp SSEE--EEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ceEE--EeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 4455 788999999999999995 589999999996432 23556789999999999999999999998653
Q ss_pred -eeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 760 -QAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 760 -~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
..|+||||+ +++|.++++. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 469999999 7899999875 568888899999999999999999 9999999999999999999999999999765
Q ss_pred cccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c--------ccc------
Q 002186 838 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G--------LLG------ 901 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~--------~~~------ 901 (955)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+.......... . ...
T Consensus 179 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 179 DSEMT-GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp CSSCC-SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ccccC-cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHH
Confidence 43222 2235667889998766 67899999999999999999999998754321100000 0 000
Q ss_pred --ccc---cccc-cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 --EMY---NENE-VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 --~~~---~~~~-~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .... .............+.+++.+||+.||++|||++|++++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 000 0000 00000011223567889999999999999999999974
No 229
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.8e-35 Score=321.06 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=195.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 23 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 23 LFT--KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp TEE--EEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHH--HhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 455 788899999999999984 579999999997543 345778899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 767 YLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 767 y~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
|+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 177 (303)
T 3a7i_A 101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177 (303)
T ss_dssp CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBC
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccccccC
Confidence 9999999999975 568999999999999999999999 999999999999999999999999999876543221 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||......++.++|||||||++|||+||+.|+....... ....+.......... .....+.
T Consensus 178 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~l~ 248 (303)
T 3a7i_A 178 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK------VLFLIPKNNPPTLEG---NYSKPLK 248 (303)
T ss_dssp CCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSCCCCCCS---SCCHHHH
T ss_pred ccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH------HHHHhhcCCCCCCcc---ccCHHHH
Confidence 1224556888999988888999999999999999999999986432110 000000000000011 1224577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+++.+||+.||++|||++|+++.
T Consensus 249 ~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 249 EFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHHHcCCChhhCcCHHHHhhC
Confidence 88999999999999999999864
No 230
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8e-36 Score=326.38 Aligned_cols=246 Identities=20% Similarity=0.240 Sum_probs=174.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|++.+++++||||+++++++...+..++||||+++|
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 788999999999999985 478999999986532 23556788999999999999999999999999999999999999
Q ss_pred ChhHHhhc----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 772 NLSEKIRT----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 772 sL~~~l~~----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 175 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccchheeccCC
Confidence 99999863 368899999999999999999999 99999999999999999999999999986543221
Q ss_pred C-------CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc--cCC
Q 002186 842 G-------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE--VGS 911 (955)
Q Consensus 842 ~-------~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 911 (955)
. ....++..|.+||.... ..++.++|||||||++|||+||+.||......... ............ ...
T Consensus 176 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~ 253 (303)
T 2vwi_A 176 DITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVL--MLTLQNDPPSLETGVQD 253 (303)
T ss_dssp ------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHH--HHHHTSSCCCTTC----
T ss_pred CccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHH--HHHhccCCCcccccccc
Confidence 1 11124455778888765 56889999999999999999999998743321100 000000000000 000
Q ss_pred CCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 912 SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 912 ~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..........+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 254 KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp -CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred chhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 0000112345778899999999999999999986
No 231
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.6e-35 Score=320.45 Aligned_cols=247 Identities=21% Similarity=0.231 Sum_probs=193.2
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----------chHHHHHHHHHHHhccC-CCCceeEeEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----------TRIKIVSEFITRIGTVR-HKNLIRLLGFC 755 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----------~~~~~~~~e~~~l~~l~-H~niv~l~g~~ 755 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++ ||||+++++++
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 16 YENYE--PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp TTTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhccc--eeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34566 788999999999999995 579999999996532 12356778999999996 99999999999
Q ss_pred EcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccc
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGF 833 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl 833 (955)
.+++..++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccc
Confidence 999999999999999999999975 568889999999999999999999 999999999999999999999999999
Q ss_pred cccccccCCC-CcccccccCchhhhh------ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccc
Q 002186 834 KYLTQLADGS-FPAKIAWTESGEFYN------AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNE 906 (955)
Q Consensus 834 ~~~~~~~~~~-~~~~~~~~~~~e~~~------~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 906 (955)
+......... ...+...|.+||... ...++.++||||+||++|||+||+.|+....... ....+...
T Consensus 171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~ 244 (298)
T 1phk_A 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML------MLRMIMSG 244 (298)
T ss_dssp CEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHT
T ss_pred hhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHH------HHHHHhcC
Confidence 8765432221 122455678888774 3457889999999999999999999986432110 01111111
Q ss_pred cccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 907 NEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 907 ~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+........+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 100011112233456788999999999999999999986
No 232
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3e-35 Score=320.34 Aligned_cols=243 Identities=14% Similarity=0.169 Sum_probs=194.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|... +|+.||+|.+.... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 15 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 15 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cceE--EEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 3455 7889999999999999964 68899999987532 235668889999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++++|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999998865 568999999999999999999999 99999999999999999999999999987653222
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+...|.+||......++.++||||+||++|||+||+.||....... ......... ...+. ...
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~---~~~ 239 (294)
T 2rku_A 170 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-YSIPK---HIN 239 (294)
T ss_dssp CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHTTC-CCCCT---TSC
T ss_pred cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHhhcc-CCCcc---ccC
Confidence 1 11224556788999888888999999999999999999999986432110 001111111 11111 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 240 PVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 456788899999999999999999863
No 233
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.8e-35 Score=326.83 Aligned_cols=242 Identities=14% Similarity=0.174 Sum_probs=194.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++|||||++++++.+.+..++
T Consensus 41 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 41 RRYV--RGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp EEEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 3455 788999999999999995 468899999987532 235678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++++|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999998865 568999999999999999999999 99999999999999999999999999987653222
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....+...|.+||......++.++|||||||++|||+||+.||....... ....+.... ..... ...
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~------~~~~~~~~~-~~~~~---~~~ 265 (335)
T 2owb_A 196 ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE------TYLRIKKNE-YSIPK---HIN 265 (335)
T ss_dssp CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH------HHHHHHHTC-CCCCT---TSC
T ss_pred ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH------HHHHHhcCC-CCCCc---cCC
Confidence 1 11224556888999888888999999999999999999999986432110 000111111 00111 112
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
..+.+++.+||+.||++|||++|+++
T Consensus 266 ~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 266 PVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 35678889999999999999999986
No 234
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.3e-35 Score=319.33 Aligned_cols=241 Identities=17% Similarity=0.183 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
....||+|+||.||+|. ..+|+.||||.+..... ..+.+.+|++++++++|||||++++++.+.+..++||||+++|+
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 105 (295)
T 2clq_A 26 DRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGS 105 (295)
T ss_dssp SBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEE
T ss_pred CcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCC
Confidence 44589999999999999 46889999999976433 35678899999999999999999999999999999999999999
Q ss_pred hhHHhhcC-----CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC-CCCceECcccccccccccCC--CC
Q 002186 773 LSEKIRTK-----RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-NMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 773 L~~~l~~~-----~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
|.+++... .++.....++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+++....... ..
T Consensus 106 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 182 (295)
T 2clq_A 106 LSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTET 182 (295)
T ss_dssp HHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CC
T ss_pred HHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccc
Confidence 99999753 35777888999999999999999 9999999999999987 89999999999875432211 11
Q ss_pred cccccccCchhhhhcc--CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHH
Q 002186 845 PAKIAWTESGEFYNAM--KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLV 922 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~--~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 922 (955)
..+...|.+||..... .++.++|||||||++|||+||+.||............. ...... .... ......+
T Consensus 183 ~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~-~~~~---~~~~~~~ 255 (295)
T 2clq_A 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV---GMFKVH-PEIP---ESMSAEA 255 (295)
T ss_dssp CCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH---HHHCCC-CCCC---TTSCHHH
T ss_pred cCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh---cccccc-cccc---ccCCHHH
Confidence 2245567888887654 37889999999999999999999986322111000000 000000 0001 1223457
Q ss_pred HHHHHHccCCCCCCCCCHHHHHH
Q 002186 923 LDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 923 ~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.+++.+||+.||++|||++|+++
T Consensus 256 ~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 256 KAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHccCChhhCCCHHHHhc
Confidence 78899999999999999999986
No 235
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.5e-35 Score=316.73 Aligned_cols=239 Identities=14% Similarity=0.185 Sum_probs=186.0
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++.+++++||||+++++++.+.+..++||||++
T Consensus 15 i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 94 (276)
T 2h6d_A 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94 (276)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccC
Confidence 7788999999999999964 89999999997532 224578899999999999999999999999999999999999
Q ss_pred CCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC-CCcc
Q 002186 770 NGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG-SFPA 846 (955)
Q Consensus 770 ~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~-~~~~ 846 (955)
+|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ ....
T Consensus 95 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 171 (276)
T 2h6d_A 95 GGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC 171 (276)
T ss_dssp SCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--------
T ss_pred CCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCcceeccc
Confidence 9999999965 568889999999999999999999 999999999999999999999999999876543221 1122
Q ss_pred cccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHH
Q 002186 847 KIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDV 925 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 925 (955)
+...|.+||...+..+ +.++||||+||++|||+||+.||...... .....+.... ...+. .....+.++
T Consensus 172 ~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~-~~~~~---~~~~~l~~l 241 (276)
T 2h6d_A 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP------TLFKKIRGGV-FYIPE---YLNRSVATL 241 (276)
T ss_dssp -----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHHHHHCC-CCCCT---TSCHHHHHH
T ss_pred CCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH------HHHHHhhcCc-ccCch---hcCHHHHHH
Confidence 4455778888776554 68899999999999999999998643210 0011111110 00011 112456788
Q ss_pred HHHccCCCCCCCCCHHHHHHH
Q 002186 926 ALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 926 ~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
+.+||+.||++|||++|++++
T Consensus 242 i~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 242 LMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHHccCChhhCCCHHHHHhC
Confidence 999999999999999999974
No 236
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-35 Score=331.25 Aligned_cols=253 Identities=22% Similarity=0.242 Sum_probs=187.5
Q ss_pred hhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccch------HHHHHHHHHHHhccCCCCceeEeEEEEcCCe
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGATR------IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~ 760 (955)
.+.|. ..+.||+|+||.||+|+.. +|+.||||+++..... .+.+.+|++++++++|||||++++++.+.+.
T Consensus 9 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 9 AKRYE--KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ----C--EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred hcccE--EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34566 7889999999999999964 7999999999753211 2357789999999999999999999999999
Q ss_pred eEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
.++||||+++ +|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999985 89888875 357888899999999999999999 9999999999999999999999999998765
Q ss_pred cccCC--CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccccccc
Q 002186 838 QLADG--SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKPIDGL 899 (955)
Q Consensus 838 ~~~~~--~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~~~~~ 899 (955)
..... ....++.+|.+||...+ ..++.++||||+||++|||++|..|+....... .|.....
T Consensus 163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTS
T ss_pred cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhcc
Confidence 43221 12235666888998755 457889999999999999999988876432110 0000000
Q ss_pred ccccccccccCCCC---chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 LGEMYNENEVGSSS---SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+..........+ ........+.+++.+||+.||++|||++|++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 00000000000000 001223568899999999999999999999874
No 237
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.6e-35 Score=318.65 Aligned_cols=230 Identities=12% Similarity=0.047 Sum_probs=181.7
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc----hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT----RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~l 763 (955)
.+|. ..+.||+|+||.||+|... +|+.||||++..... ..+.+.+|++.+++++|||||++++++.+++..|+
T Consensus 31 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 108 (286)
T 3uqc_A 31 GRYR--LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLV 108 (286)
T ss_dssp TTEE--EEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred CcEE--EEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEE
Confidence 3466 7789999999999999964 699999999975432 24678899999999999999999999999999999
Q ss_pred EEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 764 LYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
||||+++|+|.++++......+..+|+.|+++||+|||+. +|+||||||+||+++.++.+||+++|..
T Consensus 109 v~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~--------- 176 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATM--------- 176 (286)
T ss_dssp EEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCC---------
T ss_pred EEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecccc---------
Confidence 9999999999999987666667888999999999999999 9999999999999999999999966532
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
..++.++|||||||++|||+||+.||............. ....................+.
T Consensus 177 ----------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~ 237 (286)
T 3uqc_A 177 ----------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE---RDTAGQPIEPADIDRDIPFQIS 237 (286)
T ss_dssp ----------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC---BCTTSCBCCHHHHCTTSCHHHH
T ss_pred ----------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH---HHhccCCCChhhcccCCCHHHH
Confidence 125678899999999999999999998543322110000 0001100000000012234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHHHhhccCC
Q 002186 924 DVALLCTRSTPSDRPSMEEALKLLSGLKP 952 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~ 952 (955)
+++.+||+.||++| |++|+++.|+.+..
T Consensus 238 ~li~~~l~~dP~~R-s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 238 AVAARSVQGDGGIR-SASTLLNLMQQATA 265 (286)
T ss_dssp HHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred HHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence 89999999999999 99999999987643
No 238
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.2e-35 Score=329.84 Aligned_cols=250 Identities=17% Similarity=0.154 Sum_probs=192.4
Q ss_pred hcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccch------------------HHHHHHHHHHHhccCCCCceeE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATR------------------IKIVSEFITRIGTVRHKNLIRL 751 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~------------------~~~~~~e~~~l~~l~H~niv~l 751 (955)
.|. ..+.||+|+||.||+|.. +|+.||||++...... .+.+.+|++++++++||||+++
T Consensus 32 ~y~--~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 32 DYR--IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp TEE--EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred ceE--EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 455 788999999999999999 9999999999753211 1788999999999999999999
Q ss_pred eEEEEcCCeeEEEEeecCCCChhHH------hhc----CCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeee
Q 002186 752 LGFCYNRHQAYLLYDYLPNGNLSEK------IRT----KRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVF 820 (955)
Q Consensus 752 ~g~~~~~~~~~lv~ey~~~gsL~~~------l~~----~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl 820 (955)
++++.+.+..++||||+++|+|.++ +.. ..++..+..++.|+++||+|||+ . +|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEE
Confidence 9999999999999999999999998 543 45788999999999999999998 7 99999999999999
Q ss_pred CCCCCceECcccccccccccCCCCcccccccCchhhhhcc-CCcc-cccchhHHHHHHHHHhCCCCCCCCCCCCCccccc
Q 002186 821 DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAM-KEEM-YMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 898 (955)
Q Consensus 821 ~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~~~-~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~ 898 (955)
+.++.+||+|||++............+...|.+||..... .++. ++|||||||++|||+||+.||......... ...
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~-~~~ 264 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL-FNN 264 (348)
T ss_dssp CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH-HHH
T ss_pred cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH-HHH
Confidence 9999999999999876533322222345567888988766 5555 899999999999999999998754321100 000
Q ss_pred cccc---cc-------cccccC-CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 LLGE---MY-------NENEVG-SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 ~~~~---~~-------~~~~~~-~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.... .. .+.... ...........+.+++.+||+.||++|||++|++++
T Consensus 265 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 265 IRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 00 000000 000001223567889999999999999999999873
No 239
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.3e-35 Score=321.39 Aligned_cols=246 Identities=17% Similarity=0.198 Sum_probs=188.7
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 19 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 19 EVWE--IVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GTEE--EEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccee--ecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 4466 7888999999999999964 69999999987543 345678899999999999999999999999999999999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccccc--C
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLA--D 841 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~--~ 841 (955)
|+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 173 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccccc
Confidence 9999999998864 578999999999999999999999 9999999999999999999999999987532211 1
Q ss_pred CCCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchH
Q 002186 842 GSFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQ 916 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (955)
.....+...|.+||... ...++.++|||||||++|||+||+.|+....... ......... ........
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~------~~~~~~~~~-~~~~~~~~ 246 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR------VLLKIAKSD-PPTLLTPS 246 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH------HHHHHHHSC-CCCCSSGG
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH------HHHHHhccC-CcccCCcc
Confidence 11122445577888773 5567889999999999999999999986432110 000111010 00001111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 917 DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 917 ~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.....+.+++.+||+.||++|||++|++++
T Consensus 247 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 247 KWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp GSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred ccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 223457789999999999999999999863
No 240
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.2e-35 Score=325.85 Aligned_cols=249 Identities=16% Similarity=0.152 Sum_probs=188.2
Q ss_pred hhHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEE
Q 002186 685 NDVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGF 754 (955)
Q Consensus 685 ~~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~ 754 (955)
..+.+.|. ..+.||+|+||.||+|.. .+|+.||||.+..... ....+.+|++++++++||||++++++
T Consensus 6 ~~l~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 83 (322)
T 2ycf_A 6 KALRDEYI--MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83 (322)
T ss_dssp HHHHHHEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhhhcee--EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeE
Confidence 34455677 788999999999999985 5789999999864321 12347889999999999999999999
Q ss_pred EEcCCeeEEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceEC
Q 002186 755 CYNRHQAYLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLA 829 (955)
Q Consensus 755 ~~~~~~~~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~ 829 (955)
+..++ .++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++. +||+
T Consensus 84 ~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 84 FDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp EESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred EcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 97765 8999999999999999865 467888899999999999999999 9999999999999987654 9999
Q ss_pred cccccccccccCCC-CcccccccCchhhhh---ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccc
Q 002186 830 EFGFKYLTQLADGS-FPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYN 905 (955)
Q Consensus 830 DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~ 905 (955)
|||+++........ ...++..|.+||+.. ...++.++|||||||++|||+||+.||........ ... .+..
T Consensus 160 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~---~~~~ 234 (322)
T 2ycf_A 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS--LKD---QITS 234 (322)
T ss_dssp CCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSC--HHH---HHHH
T ss_pred cCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHH--HHH---HHHh
Confidence 99998764322110 112445678888863 45678899999999999999999999874332111 000 0100
Q ss_pred ccccCCCC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 906 ENEVGSSS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 906 ~~~~~~~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.. ....+ ........+.+++.+||+.||++|||++|+++
T Consensus 235 ~~-~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 235 GK-YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp TC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred Cc-cccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 00000 01122456789999999999999999999985
No 241
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.4e-35 Score=327.70 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=189.4
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEc------
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN------ 757 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~------ 757 (955)
..+|. ..+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++++++++|||||++++++..
T Consensus 16 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 93 (351)
T 3mi9_A 16 VSKYE--KLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYN 93 (351)
T ss_dssp GGGEE--EEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-----
T ss_pred cccee--EEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccc
Confidence 34566 888999999999999996 6899999999865322 24567789999999999999999999986
Q ss_pred --CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 758 --RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 758 --~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
.+..++||||++ |+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 94 RCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp ---CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 346899999997 478777765 568899999999999999999999 99999999999999999999999999
Q ss_pred ccccccccCC------CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCC-------------
Q 002186 833 FKYLTQLADG------SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ------------- 892 (955)
Q Consensus 833 l~~~~~~~~~------~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~------------- 892 (955)
+++....... ....++.+|.+||...+ ..++.++||||+||++|||+||+.||.......
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 9876532211 11224566888998765 457899999999999999999999987432110
Q ss_pred --Cccccccccccccccc--cCCCCchHHH------HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 893 --NKPIDGLLGEMYNENE--VGSSSSLQDE------IKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 893 --~~~~~~~~~~~~~~~~--~~~~~~~~~~------~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.+...... ....... ........+. ...+.+++.+||+.||++|||++|++++
T Consensus 250 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 250 PEVWPNVDNY-ELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTTSTTGGGC-GGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhccccccc-hhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00000000 0000000 0001111111 2357899999999999999999999864
No 242
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.6e-35 Score=324.83 Aligned_cols=241 Identities=15% Similarity=0.192 Sum_probs=177.3
Q ss_pred chhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-chHHHHHHHHHHHhccC-CCCceeEeEEEE--------cCCeeE
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCY--------NRHQAY 762 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~--------~~~~~~ 762 (955)
...+.||+|+||.||+|.. .+|+.||||++.... ...+.+.+|+..+.+++ |||||++++++. .....+
T Consensus 31 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~ 110 (337)
T 3ll6_A 31 RVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFL 110 (337)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEE
T ss_pred EEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEE
Confidence 3788999999999999994 589999999986543 34567889999999996 999999999994 234589
Q ss_pred EEEeecCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCC--cccCCCCCCCeeeCCCCCceECcccccc
Q 002186 763 LLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPA--IPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 763 lv~ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~--iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
+||||+. |+|.+++.. ..++.+...++.|+++||+|||+. + |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 111 LLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 9999996 799998864 478999999999999999999998 6 9999999999999999999999999987
Q ss_pred cccccCCC--------------CcccccccCchhhh---hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccc
Q 002186 836 LTQLADGS--------------FPAKIAWTESGEFY---NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDG 898 (955)
Q Consensus 836 ~~~~~~~~--------------~~~~~~~~~~~e~~---~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~ 898 (955)
........ ...++..|.+||.. ....++.++|||||||++|||+||+.||.......
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~------ 260 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR------ 260 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH------
Confidence 64332110 11245557888877 45678889999999999999999999987433211
Q ss_pred cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 899 LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
......... . .. .....+.+++.+||+.||++|||++|+++.|+.+
T Consensus 261 ~~~~~~~~~-~--~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 261 IVNGKYSIP-P--HD---TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp -----CCCC-T--TC---CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhcCcccCC-c--cc---ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 011111100 0 00 1112366788899999999999999999999865
No 243
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.6e-35 Score=320.25 Aligned_cols=246 Identities=17% Similarity=0.258 Sum_probs=185.8
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc---------
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--------- 757 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--------- 757 (955)
.+.|. ..+.||+|+||.||+|+. .+|+.||||+++......+.+.+|++++++++||||++++++|.+
T Consensus 5 ~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFE--EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEE--EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccch--hhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 34566 788999999999999995 589999999997655556778899999999999999999998865
Q ss_pred ----CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECc
Q 002186 758 ----RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAE 830 (955)
Q Consensus 758 ----~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~D 830 (955)
.+..++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 3568999999999999999975 346788889999999999999999 999999999999999999999999
Q ss_pred ccccccccccC----------------CCCcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCC
Q 002186 831 FGFKYLTQLAD----------------GSFPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQN 893 (955)
Q Consensus 831 fGl~~~~~~~~----------------~~~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~ 893 (955)
||+++...... .....+...|.+||..... .++.++||||+||++|||+| |+......
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~-- 234 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER-- 234 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH--
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH--
Confidence 99987543211 0111245567888987654 68899999999999999998 44321100
Q ss_pred ccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 894 KPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+..................+.+++.+||+.||++|||++|++++
T Consensus 235 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 235 ---VNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ---HHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ---HHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 00001110000000011112233456788999999999999999999874
No 244
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.1e-35 Score=321.17 Aligned_cols=243 Identities=16% Similarity=0.208 Sum_probs=189.7
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 30 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 30 VFD--VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp CEE--EEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhh--hheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 455 788899999999999985 469999999997543 3456788999999999999999999999999999999999
Q ss_pred CCCChhHHhh---cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--C
Q 002186 769 PNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--S 843 (955)
Q Consensus 769 ~~gsL~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~ 843 (955)
++|+|.+++. ...++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 183 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN 183 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence 9999999986 3578999999999999999999999 999999999999999999999999999865443211 1
Q ss_pred CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHH
Q 002186 844 FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVL 923 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 923 (955)
...+...|.+||......++.++|||||||++|||+||+.||........ .........+. ..........+.
T Consensus 184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~l~ 256 (314)
T 3com_A 184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA---IFMIPTNPPPT----FRKPELWSDNFT 256 (314)
T ss_dssp CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCCC----CSSGGGSCHHHH
T ss_pred ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHhcCCCcc----cCCcccCCHHHH
Confidence 12245568889998888889999999999999999999999864321110 00000000000 011112234577
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 002186 924 DVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 924 ~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+++.+||+.||++|||++|+++
T Consensus 257 ~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 257 DFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHccCChhhCcCHHHHHh
Confidence 8999999999999999999985
No 245
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=3.9e-35 Score=320.37 Aligned_cols=252 Identities=19% Similarity=0.240 Sum_probs=189.1
Q ss_pred hhhhccCCCCCceEEEeCC-CCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~- 85 (299)
T 2r3i_A 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH- 85 (299)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred hhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-
Confidence 7788999999999999964 799999999865332 23567889999999999999999999999999999999997
Q ss_pred CChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC--CC
Q 002186 771 GNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--SF 844 (955)
Q Consensus 771 gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--~~ 844 (955)
|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++........ ..
T Consensus 86 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 162 (299)
T 2r3i_A 86 QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162 (299)
T ss_dssp EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTS
T ss_pred CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccccCc
Confidence 699999865 457888899999999999999999 999999999999999999999999999875432211 11
Q ss_pred cccccccCchhhhhccC-CcccccchhHHHHHHHHHhCCCCCCCCCCCCC---------------ccccccccccccccc
Q 002186 845 PAKIAWTESGEFYNAMK-EEMYMDVYGFGEIILEILTNGRLTNAGSSLQN---------------KPIDGLLGEMYNENE 908 (955)
Q Consensus 845 ~~~~~~~~~~e~~~~~~-~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~---------------~~~~~~~~~~~~~~~ 908 (955)
..+...|.+||...+.. ++.++|||||||++|||+||+.||........ |.............+
T Consensus 163 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
T 2r3i_A 163 EVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFP 242 (299)
T ss_dssp CBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSC
T ss_pred ccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcccchhhh
Confidence 22455678889877654 78899999999999999999999875332100 000000000000000
Q ss_pred cCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--Hhhcc
Q 002186 909 VGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK--LLSGL 950 (955)
Q Consensus 909 ~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~--~L~~~ 950 (955)
....... ......+.+++.+|++.||++|||++|+++ -++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~ 290 (299)
T 2r3i_A 243 KWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDV 290 (299)
T ss_dssp CCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTC
T ss_pred cccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcC
Confidence 0000000 112356778999999999999999999987 34443
No 246
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.6e-35 Score=317.57 Aligned_cols=244 Identities=15% Similarity=0.181 Sum_probs=177.6
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ..+.+.++...++.++||||+++++++.+++..++||
T Consensus 8 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 8 DLE--PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred hhh--hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 355 788999999999999995 6899999999975422 2334455566688899999999999999999999999
Q ss_pred eecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 766 DYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 766 ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
||++ |+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 9997 588887753 5689999999999999999999842 899999999999999999999999999876543
Q ss_pred cCCC-CcccccccCchhhh----hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCc
Q 002186 840 ADGS-FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSS 914 (955)
Q Consensus 840 ~~~~-~~~~~~~~~~~e~~----~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 914 (955)
.... ...++..|.+||.. ....++.++||||+||++|||+||+.||....... ...............
T Consensus 163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~-- 235 (290)
T 3fme_A 163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-----QQLKQVVEEPSPQLP-- 235 (290)
T ss_dssp -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-----HHHHHHHHSCCCCCC--
T ss_pred cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH-----HHHHHHhccCCCCcc--
Confidence 2221 12345568888985 45678889999999999999999999986422111 001111111101000
Q ss_pred hHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 915 LQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 915 ~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.......+.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 236 ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 0122345778999999999999999999986
No 247
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.2e-35 Score=339.02 Aligned_cols=193 Identities=18% Similarity=0.209 Sum_probs=161.0
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC-----
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----- 758 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----- 758 (955)
.+.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++|||||++++++...
T Consensus 25 ~~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~ 102 (432)
T 3n9x_A 25 PDNYI--IKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKF 102 (432)
T ss_dssp CTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTC
T ss_pred cCCEE--EEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcC
Confidence 34566 888999999999999984 578999999997532 2356788999999999999999999999865
Q ss_pred CeeEEEEeecCCCChhHHhhcC--CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRTK--RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~~--~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+..|+||||++ |+|.++++.. +++.....++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++.
T Consensus 103 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 103 DELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp CCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred CeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 57899999996 6999999863 68899999999999999999999 999999999999999999999999999976
Q ss_pred ccccCC------------------------CCcccccccCchhhh-hccCCcccccchhHHHHHHHHHhCCCCCC
Q 002186 837 TQLADG------------------------SFPAKIAWTESGEFY-NAMKEEMYMDVYGFGEIILEILTNGRLTN 886 (955)
Q Consensus 837 ~~~~~~------------------------~~~~~~~~~~~~e~~-~~~~~~~~~DV~S~Gvvl~Elltg~~p~~ 886 (955)
...... ....++.+|.+||+. ....++.++||||+||++|||+||..|+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 533211 112356778999975 55678999999999999999998655543
No 248
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.2e-35 Score=319.63 Aligned_cols=250 Identities=19% Similarity=0.235 Sum_probs=186.8
Q ss_pred hcccchhhhccCCCCCceEEEeC--CCCc--EEEEEEeeccc----chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL--PTGI--TVSVKKIEWGA----TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~--~~g~--~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.|. ..+.||+|+||.||+|+. .+++ .||||+++... ...+.+.+|++++++++||||+++++++.+++ .
T Consensus 19 ~y~--~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 19 DLR--LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GEE--EEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred Hee--eeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 355 788999999999999984 3343 69999987532 23567889999999999999999999998765 8
Q ss_pred EEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||+++|+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 899999999999999965 478899999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCC-----CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 839 LADGS-----FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 839 ~~~~~-----~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
..... ...+...|.+||......++.++|||||||++|||+| |+.||...... .....+...... .
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~~~~~~~~--~ 244 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS------QILHKIDKEGER--L 244 (291)
T ss_dssp C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHTSCCC--C
T ss_pred ccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH------HHHHHHHccCCC--C
Confidence 32211 1123334788898888888999999999999999999 88888643211 011111111000 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
+........+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 11112235677899999999999999999999999987664
No 249
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.3e-35 Score=322.77 Aligned_cols=280 Identities=19% Similarity=0.266 Sum_probs=195.4
Q ss_pred CCChhhHHHHHHhhhhC-CCCCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcC
Q 002186 22 SANDPYSEALLSLKSEL-VDDFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFF 100 (955)
Q Consensus 22 ~~~~~~~~all~~k~~~-~~~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l 100 (955)
++..+|++||++||+++ .|+.+.+.+|.... .+..++|.|.|+.|+..... +.....
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~----~~~~~~~~~~g~~~~~~~~~------------------l~~~~~ 80 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQAN----SNNPQIETRTGRALKATADL------------------LEDATQ 80 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHT----TTCTTSCCSHHHHHHHHHHH------------------HHHHTS
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccc----cccccccccCCcchhhhHHH------------------Hhcccc
Confidence 34567899999999999 67777788994210 01357899999999641110 111114
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
.+++.|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+.+++|++|||++|.++ .+|..++++++|++|+|
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 67889999999998 78888999999999999999998 88989999999999999999998 78989999999999999
Q ss_pred cCCCCcccCCCCcCC---------CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEe
Q 002186 181 AGSYFSGPIPSQFGS---------FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (955)
Q Consensus 181 s~n~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ 251 (955)
++|.+.+.+|..++. +++|++|+|++|.++ .+|..++.+++|++|++++|.+.+ +|..++++++|++|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 999888888887764 677777777777666 556666666666666666665553 444455555555555
Q ss_pred ccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccccc
Q 002186 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (955)
Q Consensus 252 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (955)
+++|++.+.+|..++.+++|++|++++|.+.+.+|..+..+++|++|+|++|++.+.+|.+++.+++|+.+++..+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555554443
No 250
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.6e-35 Score=353.03 Aligned_cols=241 Identities=16% Similarity=0.140 Sum_probs=194.1
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc----chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA----TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~l 763 (955)
.|. ..+.||+|+||.||+|+. .+|+.||||+++... ...+.+..|.+++..+ +||||+++++++.+.+..|+
T Consensus 342 ~f~--~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 342 DFN--FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp TEE--EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ceE--EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 355 788999999999999995 578999999997532 2345677888899887 79999999999999999999
Q ss_pred EEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 764 LYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 764 v~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||||+++|+|.++++. ..++.+...|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+++......
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 9999999999999975 578889999999999999999999 99999999999999999999999999997532222
Q ss_pred C--CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 842 G--SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 842 ~--~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++++|.+||+.....++.++|||||||++|||+||+.||..... ......+.... ...+. ...
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~-~~~p~---~~s 566 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIMEHN-VAYPK---SMS 566 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHSSC-CCCCT---TSC
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHHhCC-CCCCc---cCC
Confidence 1 122366778999999988999999999999999999999999974321 11111222211 11111 223
Q ss_pred HHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSM-----EEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~-----~ev~~ 945 (955)
.++.+++..||+.||++||++ +||.+
T Consensus 567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 457788999999999999997 67764
No 251
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.4e-34 Score=313.87 Aligned_cols=248 Identities=16% Similarity=0.174 Sum_probs=194.0
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCee
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA 761 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~ 761 (955)
.+.+.|. ..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 19 ~~~~~y~--i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (287)
T 2wei_A 19 TFAERYN--IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSF 96 (287)
T ss_dssp HHHHHEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHhhcce--eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeE
Confidence 3445676 8889999999999999964 79999999997532 2356788999999999999999999999999999
Q ss_pred EEEEeecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC---CCceECccccccc
Q 002186 762 YLLYDYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN---MEPHLAEFGFKYL 836 (955)
Q Consensus 762 ~lv~ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~---~~~ki~DfGl~~~ 836 (955)
++||||+++|+|.+.+.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.+ +.+||+|||++..
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~ 173 (287)
T 2wei_A 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (287)
T ss_dssp EEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGT
T ss_pred EEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCccee
Confidence 999999999999998864 568889999999999999999999 99999999999999754 4699999999876
Q ss_pred ccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 837 TQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 837 ~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....... ...+...|.+||...+ .++.++||||+||++|||+||+.||....... ....+.........+..
T Consensus 174 ~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~ 246 (287)
T 2wei_A 174 FQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------ILKRVETGKYAFDLPQW 246 (287)
T ss_dssp BCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHHHHCCCCCCSGGG
T ss_pred ecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHHHcCCCCCCchhh
Confidence 5433221 1224556788898765 48889999999999999999999986432110 00111111000001111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 247 RTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 122356778999999999999999999997
No 252
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.5e-35 Score=333.55 Aligned_cols=252 Identities=19% Similarity=0.190 Sum_probs=193.0
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccC--------CCCceeEeEEEE---
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVR--------HKNLIRLLGFCY--- 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~--------H~niv~l~g~~~--- 756 (955)
.+|. ..+.||+|+||+||+|+ ..+|+.||||+++......+.+.+|++++++++ |||||++++++.
T Consensus 37 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 37 GRYH--VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CeEE--EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3455 78899999999999998 467899999999866555677889999999886 788999999988
Q ss_pred -cCCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCC-------
Q 002186 757 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENM------- 824 (955)
Q Consensus 757 -~~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~------- 824 (955)
.....++||||+ +|++.+.+.. ..++.....|+.|+++||+|||+.+ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 115 VNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhh
Confidence 556899999999 5667666643 3689999999999999999999864 899999999999999775
Q ss_pred ------------------------------------------CceECcccccccccccCCCCcccccccCchhhhhccCC
Q 002186 825 ------------------------------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKE 862 (955)
Q Consensus 825 ------------------------------------------~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 862 (955)
.+||+|||+++....... ...++..|.+||+..+..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~-~~~gt~~y~aPE~~~~~~~ 270 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT-EDIQTRQYRSLEVLIGSGY 270 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC-SCCSCGGGCCHHHHHTSCC
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc-cCCCCCcccCChhhcCCCC
Confidence 799999999876543322 2235667889999988889
Q ss_pred cccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-------cccc--------------ccccc----------ccc--
Q 002186 863 EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-------GLLG--------------EMYNE----------NEV-- 909 (955)
Q Consensus 863 ~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-------~~~~--------------~~~~~----------~~~-- 909 (955)
+.++|||||||++|||+||+.||............ .... ..+.. .+.
T Consensus 271 ~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (397)
T 1wak_A 271 NTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGL 350 (397)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCH
T ss_pred CcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcch
Confidence 99999999999999999999999743322110000 0000 00000 000
Q ss_pred -----CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 -----GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 -----~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+....+.+++.+||+.||++|||++|++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 351 FEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp HHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred hHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001124456678899999999999999999999863
No 253
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2e-35 Score=331.32 Aligned_cols=251 Identities=20% Similarity=0.266 Sum_probs=176.2
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcC------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNR------ 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~------ 758 (955)
++|. ..+.||+|+||.||+|. ..+|+.||||++.... ...+.+.+|++++++++|||||++++++...
T Consensus 29 ~~y~--~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 29 ERYQ--NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp TTEE--EEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceE--EeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 4566 78899999999999998 5689999999996532 2356678999999999999999999999754
Q ss_pred CeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccc
Q 002186 759 HQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 759 ~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~ 837 (955)
...|+||||+ +++|.++++. .+++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 6899998875 578899999999999999999999 9999999999999999999999999998765
Q ss_pred cccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc--------c-------
Q 002186 838 QLADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------L------- 900 (955)
Q Consensus 838 ~~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~--------~------- 900 (955)
..... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||.+.......... .. .
T Consensus 183 ~~~~~-~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~ 261 (367)
T 2fst_X 183 ADEMT-GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHH
T ss_pred cccCC-CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHH
Confidence 43221 2235667889998766 67899999999999999999999998754321100000 00 0
Q ss_pred -cccccccccCCCCchH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 -GEMYNENEVGSSSSLQ----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 -~~~~~~~~~~~~~~~~----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+........ .....+.+++.+||+.||++|||++|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000000000000011 123457899999999999999999999864
No 254
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-35 Score=335.76 Aligned_cols=188 Identities=21% Similarity=0.269 Sum_probs=148.7
Q ss_pred hhhccCCCCCceEEEeCC---CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc--CCeeEEEEeecCC
Q 002186 696 CEEAARPQSAAGCKAVLP---TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQAYLLYDYLPN 770 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~~~lv~ey~~~ 770 (955)
..+||+|+||.||+|+.. +++.||||+++.... .+.+.+|++++++++|||||++++++.. ....++||||++
T Consensus 26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~- 103 (405)
T 3rgf_A 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE- 103 (405)
T ss_dssp SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-
T ss_pred CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-
Confidence 457999999999999854 688999999975432 3457789999999999999999999954 678999999997
Q ss_pred CChhHHhhc-----------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----CCCCCceECcccccc
Q 002186 771 GNLSEKIRT-----------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF----DENMEPHLAEFGFKY 835 (955)
Q Consensus 771 gsL~~~l~~-----------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl----~~~~~~ki~DfGl~~ 835 (955)
|+|.+++.. .+++.....|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++
T Consensus 104 ~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 180 (405)
T 3rgf_A 104 HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180 (405)
T ss_dssp EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC
T ss_pred CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCCce
Confidence 588888752 267888999999999999999999 99999999999999 778899999999997
Q ss_pred cccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 836 LTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 836 ~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
....... ....++.+|.+||+..+ ..++.++||||+||++|||+||+.||...
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 181 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 6543211 11234666889998876 45899999999999999999999999743
No 255
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.5e-35 Score=329.05 Aligned_cols=251 Identities=17% Similarity=0.226 Sum_probs=190.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCee---
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQA--- 761 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~--- 761 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++...+..
T Consensus 42 ~~y~--~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 42 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccEE--EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 4465 778899999999999984 5799999999975322 256778999999999999999999999876654
Q ss_pred ---EEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 762 ---YLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 762 ---~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
++||||++ |+|.+.+....++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 99999997 799999988899999999999999999999999 99999999999999999999999999987654
Q ss_pred ccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c--------c--------c
Q 002186 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G--------L--------L 900 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~--------~--------~ 900 (955)
..... ..++.+|.+||.... ..++.++||||+||++|||+||+.||............ . . .
T Consensus 196 ~~~~~-~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 196 AEMTG-YVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp ----C-TTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred cCcCC-cccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 33222 224566888998776 67899999999999999999999998743211000000 0 0 0
Q ss_pred cccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 901 GEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 901 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......+....... ......+.+++.+||+.||++|||++|++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 000000000000111 1124568899999999999999999999864
No 256
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.9e-35 Score=337.42 Aligned_cols=252 Identities=12% Similarity=0.062 Sum_probs=193.3
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCCC-CceeEeEEEEcCCeeEEEEe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK-NLIRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~-niv~l~g~~~~~~~~~lv~e 766 (955)
+.|. ..+.||+|+||.||+|+ ..+|+.||||+++.... .+.+.+|+++++.++|+ +|..+..++...+..++|||
T Consensus 7 ~~y~--i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 7 NKFR--LGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTEE--CCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CcEE--EEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 3465 78899999999999999 46899999998865332 23467889999999874 55566666777889999999
Q ss_pred ecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee---CCCCCceECccccccccccc
Q 002186 767 YLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---DENMEPHLAEFGFKYLTQLA 840 (955)
Q Consensus 767 y~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---~~~~~~ki~DfGl~~~~~~~ 840 (955)
|+ +|+|.+++.. .+++.++..|+.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 8999999963 678999999999999999999999 99999999999999 58899999999999765433
Q ss_pred CCC---------CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC
Q 002186 841 DGS---------FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS 911 (955)
Q Consensus 841 ~~~---------~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (955)
... ...++..|.+||...+..++.++|||||||++|||+||+.||......... ..+..+........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~---~~~~~i~~~~~~~~ 236 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK---QKYEKISEKKVATS 236 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH---HHHHHHHHHHHHSC
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH---HHHHHHhhcccccc
Confidence 211 223556688999999889999999999999999999999999753321110 01111111000000
Q ss_pred CC-chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 912 SS-SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 912 ~~-~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
.. .......++.+++..||+.||++||++++|++.|+.+
T Consensus 237 ~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 237 IEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00 0011235678999999999999999999999998765
No 257
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.9e-35 Score=324.13 Aligned_cols=249 Identities=14% Similarity=0.188 Sum_probs=168.5
Q ss_pred Hhhhcccchh-hhccCCCCCceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEc----CCe
Q 002186 687 VLRSFNSTEC-EEAARPQSAAGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYN----RHQ 760 (955)
Q Consensus 687 ~~~~~~~~~~-~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~----~~~ 760 (955)
+.+.|. .. +.||+|+||.||+|... +|+.||||++....... .+....++.++||||+++++++.. ...
T Consensus 26 ~~~~y~--i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQ--LSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKAR---QEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeE--ecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHH---HHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 344565 53 46999999999999964 79999999997543222 233334566799999999999876 445
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceECcccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLAEFGF 833 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~DfGl 833 (955)
.++||||+++|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEecccc
Confidence 8999999999999999976 368889999999999999999999 9999999999999986 45599999999
Q ss_pred cccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 834 KYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 834 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
++...........++..|.+||+.....++.++||||+||++|||+||+.||.......... ...............+
T Consensus 178 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~~~~~~~~~~~ 255 (336)
T 3fhr_A 178 AKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP--GMKRRIRLGQYGFPNP 255 (336)
T ss_dssp CEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------------------CCCTT
T ss_pred ceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh--hHHHhhhccccccCch
Confidence 87654333333335666888998888888899999999999999999999987433211100 0000000000000011
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
........+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 256 EWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred hhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 11223356778999999999999999999997
No 258
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.3e-35 Score=325.52 Aligned_cols=241 Identities=16% Similarity=0.166 Sum_probs=183.4
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHH-HhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITR-IGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~-l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|.. .+|+.||||+++.... ....+..|+.. ++.++|||||++++++.+++..++||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 778899999999999994 6899999999975322 23344444444 7889999999999999999999999999974
Q ss_pred CChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC-
Q 002186 771 GNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS- 843 (955)
Q Consensus 771 gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~- 843 (955)
+|.+++.. ..++.....++.|+++||+|||+.+ +|+||||||+||+++.++.+||+|||+++........
T Consensus 135 -~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~ 211 (340)
T 3an0_A 135 -SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKT 211 (340)
T ss_dssp -EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHHH
T ss_pred -cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceecccccccc
Confidence 99888863 5688999999999999999999632 8999999999999999999999999998754322111
Q ss_pred CcccccccCchhhhh----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 844 FPAKIAWTESGEFYN----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 844 ~~~~~~~~~~~e~~~----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
...++..|.+||+.. ...++.++|||||||++|||+||+.||....... ..+............ .....
T Consensus 212 ~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~ 284 (340)
T 3an0_A 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF-----QQLKQVVEEPSPQLP--ADKFS 284 (340)
T ss_dssp HSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH-----HHHHHHHHSCCCCCC--GGGSC
T ss_pred cCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH-----HHHHHHhcCCCCCCC--cccCC
Confidence 112455688889864 3468899999999999999999999986432111 011111111100000 11223
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 920 KLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
.++.+++.+||+.||++|||++|+++
T Consensus 285 ~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 285 AEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHccCCcccCcCHHHHhc
Confidence 56788999999999999999999986
No 259
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.2e-34 Score=325.71 Aligned_cols=247 Identities=16% Similarity=0.246 Sum_probs=183.1
Q ss_pred hcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC----------
Q 002186 690 SFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR---------- 758 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~---------- 758 (955)
+|. ..+.||+|+||+||+|. ..+|+.||||++..... ...+|++++++++|||||++++++...
T Consensus 8 ~y~--~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~---~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 8 KYS--LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR---YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp TEE--EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred eEE--EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc---hHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 455 78899999999999998 46899999999865432 223689999999999999999998542
Q ss_pred ----------------------------CeeEEEEeecCCCChhHHhhc------CCCHHHHHHHHHHHHHHHHHHhcCC
Q 002186 759 ----------------------------HQAYLLYDYLPNGNLSEKIRT------KRDWAAKYKIVLGVARGLCFLHHDC 804 (955)
Q Consensus 759 ----------------------------~~~~lv~ey~~~gsL~~~l~~------~~~~~~~~~i~~~ia~gl~~lH~~~ 804 (955)
...++||||++ |+|.+.+.. ..++.....++.|+++||+|||+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~- 160 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL- 160 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT-
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence 34889999998 688887753 568889999999999999999998
Q ss_pred CCCcccCCCCCCCeeeC-CCCCceECcccccccccccCCC-CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhC
Q 002186 805 YPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTN 881 (955)
Q Consensus 805 ~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg 881 (955)
+|+||||||+||+++ .++.+||+|||+++........ ...+..+|.+||...+. .++.++||||+||++|||++|
T Consensus 161 --gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g 238 (383)
T 3eb0_A 161 --GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILG 238 (383)
T ss_dssp --TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHS
T ss_pred --cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhC
Confidence 999999999999998 6889999999999765433222 22345668889987654 589999999999999999999
Q ss_pred CCCCCCCCCCCCcccc-cccc-----------ccccccccC--CCCchH-----HHHHHHHHHHHHccCCCCCCCCCHHH
Q 002186 882 GRLTNAGSSLQNKPID-GLLG-----------EMYNENEVG--SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEE 942 (955)
Q Consensus 882 ~~p~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~--~~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~e 942 (955)
+.||............ .... ..+.....+ ....+. .....+.+++.+||+.||++|||+.|
T Consensus 239 ~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (383)
T 3eb0_A 239 KPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYE 318 (383)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9998753321100000 0000 000000000 000111 12345789999999999999999999
Q ss_pred HHH
Q 002186 943 ALK 945 (955)
Q Consensus 943 v~~ 945 (955)
+++
T Consensus 319 ~l~ 321 (383)
T 3eb0_A 319 AMA 321 (383)
T ss_dssp HHT
T ss_pred Hhc
Confidence 985
No 260
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.7e-35 Score=328.93 Aligned_cols=252 Identities=17% Similarity=0.219 Sum_probs=184.9
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc------------hHHHHHHHHHHHhccCCCCceeEeEEEE
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT------------RIKIVSEFITRIGTVRHKNLIRLLGFCY 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~------------~~~~~~~e~~~l~~l~H~niv~l~g~~~ 756 (955)
+.|. ..+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++|||||++++++.
T Consensus 22 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 22 SPYT--VQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp CSCE--EEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred cceE--EeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 4455 7889999999999999988899999999854211 1367889999999999999999999985
Q ss_pred c-----CCeeEEEEeecCCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceE
Q 002186 757 N-----RHQAYLLYDYLPNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHL 828 (955)
Q Consensus 757 ~-----~~~~~lv~ey~~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki 828 (955)
. ....++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl 175 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITI 175 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEE
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEE
Confidence 4 336899999998 688888865 368899999999999999999999 9999999999999999999999
Q ss_pred CcccccccccccCCC-CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc------
Q 002186 829 AEFGFKYLTQLADGS-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL------ 899 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~------ 899 (955)
+|||+++........ ...++.+|.+||.... ..++.++||||+||++|||+||+.||............ ..
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 255 (362)
T 3pg1_A 176 CDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKI 255 (362)
T ss_dssp CCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred EecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 999998754332221 2235566888998765 67889999999999999999999998743211000000 00
Q ss_pred ----------ccccccccccCC-CCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 900 ----------LGEMYNENEVGS-SSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 900 ----------~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..+......... .... +.....+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 256 EDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 000000000000 0000 1123457899999999999999999999874
No 261
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=322.62 Aligned_cols=244 Identities=18% Similarity=0.218 Sum_probs=187.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEc------CCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYN------RHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~------~~~ 760 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||++.......+.+.+|+++++++ +||||+++++++.. .+.
T Consensus 24 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 101 (326)
T 2x7f_A 24 GIFE--LVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ 101 (326)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCE
T ss_pred CcEE--EEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccce
Confidence 4465 788999999999999995 5899999999986655667888999999998 79999999999986 468
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 178 (326)
T 2x7f_A 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 178 (326)
T ss_dssp EEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC-
T ss_pred EEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCcee
Confidence 8999999999999999974 467888899999999999999999 999999999999999999999999999875
Q ss_pred ccccCC--CCcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 837 TQLADG--SFPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 837 ~~~~~~--~~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
...... ....+...|.+||... ...++.++|||||||++|||+||+.||........ .........+. .
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~-~ 254 (326)
T 2x7f_A 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA---LFLIPRNPAPR-L 254 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH---HHHHHHSCCCC-C
T ss_pred cCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH---HHHhhcCcccc-C
Confidence 433211 1122455678888875 45678899999999999999999999864321100 00000000000 0
Q ss_pred CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 910 GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 910 ~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
... .....+.+++.+||+.||++|||++|+++
T Consensus 255 -~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 255 -KSK---KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp -SCS---CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -Ccc---ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 011 11245778889999999999999999986
No 262
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=323.48 Aligned_cols=251 Identities=18% Similarity=0.222 Sum_probs=190.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEcCCe----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 760 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.++++++|||||++++++...+.
T Consensus 24 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 24 KTYV--SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred ceEE--EeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3455 778899999999999985 5799999999965322 24567899999999999999999999987654
Q ss_pred --eEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccccc
Q 002186 761 --AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQ 838 (955)
Q Consensus 761 --~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~ 838 (955)
.++||||++ |+|.+++....++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 177 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC--
T ss_pred eeEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCC
Confidence 499999997 699999988889999999999999999999999 99999999999999999999999999987644
Q ss_pred ccCCCCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c------------------
Q 002186 839 LADGSFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G------------------ 898 (955)
Q Consensus 839 ~~~~~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~------------------ 898 (955)
.... ...++.+|.+||...+ ..++.++||||+||++|||+||+.||............ .
T Consensus 178 ~~~~-~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 178 AEMT-GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp -------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred CCcc-ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 3221 1224566888898766 67889999999999999999999998743211000000 0
Q ss_pred --cccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 --LLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.......................+.+++.+|++.||++|||++|++++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 000000000000001112234567889999999999999999999864
No 263
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=1.4e-34 Score=347.77 Aligned_cols=243 Identities=16% Similarity=0.177 Sum_probs=190.6
Q ss_pred hhhhccCCCCCceEEEeCC----CCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLP----TGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~----~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~ 768 (955)
..+.||+|+||.||+|... .+..||||+++.... ..+.+.+|+.++++++|||||+++|++. ++..++||||+
T Consensus 394 i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~ 472 (656)
T 2j0j_A 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELC 472 (656)
T ss_dssp EEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred EeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcC
Confidence 6778999999999999853 356899999875322 3467889999999999999999999985 46789999999
Q ss_pred CCCChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC--
Q 002186 769 PNGNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS-- 843 (955)
Q Consensus 769 ~~gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~-- 843 (955)
++|+|.++++. ..++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 473 ~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~ 549 (656)
T 2j0j_A 473 TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 549 (656)
T ss_dssp TTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec
Confidence 99999999974 468899999999999999999999 9999999999999999999999999998765332211
Q ss_pred -CcccccccCchhhhhccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHH
Q 002186 844 -FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKL 921 (955)
Q Consensus 844 -~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (955)
...+...|.+||......++.++|||||||++|||+| |..||...... .....+........++ .....
T Consensus 550 ~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~~~i~~~~~~~~~~---~~~~~ 620 (656)
T 2j0j_A 550 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVIGRIENGERLPMPP---NCPPT 620 (656)
T ss_dssp ----CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHHHHHHTCCCCCCT---TCCHH
T ss_pred cCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHHHHHHcCCCCCCCc---cccHH
Confidence 1113345888999888889999999999999999998 77787643211 1111111111011111 22346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHHHhhcc
Q 002186 922 VLDVALLCTRSTPSDRPSMEEALKLLSGL 950 (955)
Q Consensus 922 ~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~ 950 (955)
+.+++.+||+.||++|||++|+++.|+.+
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 77899999999999999999999999876
No 264
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.1e-34 Score=325.73 Aligned_cols=255 Identities=17% Similarity=0.205 Sum_probs=177.3
Q ss_pred hHhhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCCe----
Q 002186 686 DVLRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 760 (955)
Q Consensus 686 ~~~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 760 (955)
...+.|. ..+.||+|+||.||+|+. .+|+.||||++...........+|++.+++++|||||+++++|...+.
T Consensus 20 ~~~~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~ 97 (360)
T 3e3p_A 20 KEMDRFQ--VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRR 97 (360)
T ss_dssp HHHTTEE--EC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTT
T ss_pred hhccceE--EEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccc
Confidence 3345566 888999999999999995 579999999987654444456677888899999999999999975433
Q ss_pred ---eEEEEeecCCCChhHHhh----c--CCCHHHHHHHHHHHHHHHHHHh--cCCCCCcccCCCCCCCeeeCC-CCCceE
Q 002186 761 ---AYLLYDYLPNGNLSEKIR----T--KRDWAAKYKIVLGVARGLCFLH--HDCYPAIPHGDLKASNIVFDE-NMEPHL 828 (955)
Q Consensus 761 ---~~lv~ey~~~gsL~~~l~----~--~~~~~~~~~i~~~ia~gl~~lH--~~~~~~iiHrdlk~~NiLl~~-~~~~ki 828 (955)
.++||||+++ +|.+.+. . ..++.....++.|++.|++||| +. +|+||||||+||+++. ++.+||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 98 DIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp CEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEEEE
T ss_pred ceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcEEE
Confidence 7899999986 5554443 2 4578888899999999999999 66 9999999999999996 899999
Q ss_pred CcccccccccccCCC-CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-c-------
Q 002186 829 AEFGFKYLTQLADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-G------- 898 (955)
Q Consensus 829 ~DfGl~~~~~~~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~------- 898 (955)
+|||+++........ ...++..|.+||+..+. .++.++|||||||++|||+||+.||............ .
T Consensus 174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 253 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR 253 (360)
T ss_dssp CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence 999999765433322 22345668889987554 4899999999999999999999998753321100000 0
Q ss_pred -ccc---------ccccccccC----CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 899 -LLG---------EMYNENEVG----SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 899 -~~~---------~~~~~~~~~----~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... ......... ...........+.+++.+||+.||++|||++|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 254 EVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred HHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 000 000000000 000001134578899999999999999999999864
No 265
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.3e-34 Score=325.44 Aligned_cols=252 Identities=18% Similarity=0.239 Sum_probs=191.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC-----Ce
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 760 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|++++++++|||||++++++... ..
T Consensus 27 ~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 27 PRYT--NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccEE--EEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 3465 888999999999999984 5789999999975332 346788999999999999999999999764 36
Q ss_pred eEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.++||||++ |+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 180 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 180 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred EEEEEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence 899999997 699998875 578999999999999999999999 999999999999999999999999999876543
Q ss_pred cCC-----CCcccccccCchhhhh-ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cccc-----------
Q 002186 840 ADG-----SFPAKIAWTESGEFYN-AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GLLG----------- 901 (955)
Q Consensus 840 ~~~-----~~~~~~~~~~~~e~~~-~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~~~----------- 901 (955)
... ....++.+|.+||... ...++.++||||+||++|||+||+.||............ ....
T Consensus 181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 260 (364)
T 3qyz_A 181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 260 (364)
T ss_dssp GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCC
T ss_pred CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence 221 1123566788899764 445899999999999999999999998754321110000 0000
Q ss_pred -----ccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 902 -----EMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 902 -----~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
......+....... ......+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000000000 1123567899999999999999999999863
No 266
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.3e-34 Score=322.11 Aligned_cols=256 Identities=17% Similarity=0.211 Sum_probs=196.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC--CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCC------ceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 760 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++......+.+.+|++++++++|+| |+++++++.+.+.
T Consensus 14 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 14 ARYE--IVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred CceE--EEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 3465 888999999999999984 47899999999865555677888999998887765 9999999999999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC--------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE-------------- 822 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~-------------- 822 (955)
.++||||+ +|+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 8999999975 357888999999999999999999 9999999999999987
Q ss_pred -----CCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc-c
Q 002186 823 -----NMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP-I 896 (955)
Q Consensus 823 -----~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~-~ 896 (955)
++.+||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||.......... .
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 246 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEHHS-TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSCCC-SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCccccc-cccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 66899999999876443222 2235566889999988889999999999999999999999987432111000 0
Q ss_pred ccccc-------------ccccc---cc-----------------cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 897 DGLLG-------------EMYNE---NE-----------------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 897 ~~~~~-------------~~~~~---~~-----------------~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
..... ..... .+ ............++.+++.+||+.||++|||++|+
T Consensus 247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 326 (339)
T 1z57_A 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA 326 (339)
T ss_dssp HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence 00000 00000 00 00000112345678899999999999999999999
Q ss_pred HHH--hhccC
Q 002186 944 LKL--LSGLK 951 (955)
Q Consensus 944 ~~~--L~~~~ 951 (955)
+++ ++.++
T Consensus 327 l~hp~f~~~~ 336 (339)
T 1z57_A 327 LKHPFFDLLK 336 (339)
T ss_dssp TTSGGGGGGG
T ss_pred hcCHHHHHHh
Confidence 864 45443
No 267
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.7e-34 Score=327.37 Aligned_cols=250 Identities=17% Similarity=0.198 Sum_probs=183.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcCC------eeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNRH------QAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~------~~~lv~ey~ 768 (955)
..+.||+|+||+||+|+..++..||||++..... ...+|++++++++|||||+++++|...+ ..++||||+
T Consensus 44 ~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~---~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~ 120 (394)
T 4e7w_A 44 NCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR---FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV 120 (394)
T ss_dssp EEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT---SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECC
T ss_pred EeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc---hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeecc
Confidence 8889999999999999987777799999864322 2236899999999999999999996543 378999999
Q ss_pred CCCChhHHh-----hcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcccccccccccCC
Q 002186 769 PNGNLSEKI-----RTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFKYLTQLADG 842 (955)
Q Consensus 769 ~~gsL~~~l-----~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~~~~~~~~~ 842 (955)
+++.+.... ....++.....++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+++.......
T Consensus 121 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~ 197 (394)
T 4e7w_A 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP 197 (394)
T ss_dssp SEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred CccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCC
Confidence 865443332 23568888899999999999999999 999999999999999 789999999999976543322
Q ss_pred C-CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc-cc--------c----ccccccc
Q 002186 843 S-FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID-GL--------L----GEMYNEN 907 (955)
Q Consensus 843 ~-~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~-~~--------~----~~~~~~~ 907 (955)
. ...++.+|.+||...+ ..++.++||||+||++|||++|+.||.+.......... .. . .......
T Consensus 198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~ 277 (394)
T 4e7w_A 198 NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHK 277 (394)
T ss_dssp CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSC
T ss_pred CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhc
Confidence 2 2235667889998765 45899999999999999999999999754321100000 00 0 0000000
Q ss_pred ccC-CCCchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhcc
Q 002186 908 EVG-SSSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL--LSGL 950 (955)
Q Consensus 908 ~~~-~~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~--L~~~ 950 (955)
... ...... ....++.+++.+||+.||++|||+.|++++ ++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 278 FPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328 (394)
T ss_dssp CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTT
T ss_pred cccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhh
Confidence 000 000011 123568899999999999999999999974 4444
No 268
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-34 Score=314.35 Aligned_cols=242 Identities=16% Similarity=0.175 Sum_probs=186.1
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc-----chHHHHHHHHHHHhccCCCCceeEeEEEEc--CCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA-----TRIKIVSEFITRIGTVRHKNLIRLLGFCYN--RHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~-----~~~~~~~~e~~~l~~l~H~niv~l~g~~~~--~~~ 760 (955)
++|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++||||+++++++.. .+.
T Consensus 5 ~~y~--i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 5 GKYL--MGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp CCBC--CCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred ccee--EeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 4455 788999999999999996 578999999997532 235678899999999999999999999853 457
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
.++||||+++| +.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 7776653 468889999999999999999999 999999999999999999999999999876
Q ss_pred ccccCC----CCcccccccCchhhhhccC--CcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 837 TQLADG----SFPAKIAWTESGEFYNAMK--EEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 837 ~~~~~~----~~~~~~~~~~~~e~~~~~~--~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
...... ....+...|.+||...... .+.++||||+||++|||+||+.||...... .....+.... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~i~~~~-~~ 231 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY------KLFENIGKGS-YA 231 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH------HHHHHHHHCC-CC
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH------HHHHHHhcCC-CC
Confidence 432211 1122455678889876543 367899999999999999999998643210 0111111111 11
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .....+.+++.+||+.||++|||++|++++
T Consensus 232 ~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 IPG---DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp CCS---SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCC---ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 122456788999999999999999999964
No 269
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.1e-34 Score=328.20 Aligned_cols=196 Identities=18% Similarity=0.176 Sum_probs=163.8
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-CC-----CceeEeEEEEcCCe
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HK-----NLIRLLGFCYNRHQ 760 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~-----niv~l~g~~~~~~~ 760 (955)
.++|. ..+.||+|+||+||+|.. .+|+.||||+++......+.+..|+++++.++ |+ +||++++++...+.
T Consensus 53 ~~~y~--~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 53 MDRYE--IDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp TTTEE--EEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeEE--EEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 44566 788999999999999985 47899999999865545566777888887775 44 49999999999999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC--CCCCceECccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD--ENMEPHLAEFGFK 834 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~--~~~~~ki~DfGl~ 834 (955)
.++||||++ |+|.+++.. ..++.....++.|++.||+|||.+ ..+|+||||||+|||++ .++.+||+|||++
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 999999996 699999975 368999999999999999999953 23899999999999994 5788999999999
Q ss_pred ccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCC
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAG 888 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~ 888 (955)
+....... ...++..|.+||+..+..++.++|||||||++|||+||+.||...
T Consensus 209 ~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQRIY-QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCCCC-SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecccccc-cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 76543222 223556688999998888999999999999999999999998743
No 270
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.7e-35 Score=319.09 Aligned_cols=252 Identities=29% Similarity=0.406 Sum_probs=210.6
Q ss_pred CCCcEEECCCCcCcc--cCCccccCCCCCCEEEccC-CcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceE
Q 002186 101 NELVDLNLSHNSFSG--QFPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKV 177 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~ 177 (955)
.+++.|+|++|.++| .+|..|.++++|++|+|++ |.+.+.+|..|+.+++|++|+|++|.+++.+|..+.++++|++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 468889999999988 8888888888888888884 8888888888888888888888888777777777777777777
Q ss_pred EEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCC-CCcEEeccCCC
Q 002186 178 LNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMS-EVQYLDIAGAN 256 (955)
Q Consensus 178 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~-~L~~L~Ls~n~ 256 (955)
|+|++|.+++.+|..|+++++|++|+|++|.+++.+|.. +++++ +|++|++++|.
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~------------------------l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDS------------------------YGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGG------------------------GGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHH------------------------HhhhhhcCcEEECcCCe
Confidence 777777777777777777777777777777666555544 44554 66666667777
Q ss_pred CCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccc
Q 002186 257 LSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPES 336 (955)
Q Consensus 257 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 336 (955)
+++.+|..+..++ |++|++++|++++..|..|..+++|+.|+|++|++++.+|. +..+++|++|++++|++++.+|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 7777777777776 99999999999999999999999999999999999987765 889999999999999999999999
Q ss_pred cCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCc-ccc
Q 002186 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN-FNG 379 (955)
Q Consensus 337 l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~-l~g 379 (955)
+..+++|+.|++++|+++|.+|.. +.+++|+.+++++|. +.|
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 999999999999999999999987 889999999999998 555
No 271
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=322.56 Aligned_cols=245 Identities=18% Similarity=0.257 Sum_probs=185.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.||+|+||.||+|...+ .||||+++... ...+.+.+|++++++++||||+++++++.+++..++||||+++|
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 77899999999999998743 49999987532 22345678899999999999999999999999999999999999
Q ss_pred ChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC-------
Q 002186 772 NLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD------- 841 (955)
Q Consensus 772 sL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~------- 841 (955)
+|.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||+++ ++.+||+|||+++......
T Consensus 115 ~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~ 190 (319)
T 2y4i_B 115 TLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDK 190 (319)
T ss_dssp EHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----------CCS
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccccccccccccc
Confidence 99999976 367889999999999999999999 999999999999998 6799999999976542111
Q ss_pred CCCcccccccCchhhhhc---------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCC
Q 002186 842 GSFPAKIAWTESGEFYNA---------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSS 912 (955)
Q Consensus 842 ~~~~~~~~~~~~~e~~~~---------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (955)
.....++..|.+||.... ..++.++|||||||++|||+||+.||....... .. ........+. .. .
T Consensus 191 ~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~-~~~~~~~~~~-~~-~ 265 (319)
T 2y4i_B 191 LRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--II-WQMGTGMKPN-LS-Q 265 (319)
T ss_dssp CBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HH-HHHHTTCCCC-CC-C
T ss_pred cccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HH-HHhccCCCCC-CC-c
Confidence 111224556788888764 346888999999999999999999986432110 00 0000001111 00 0
Q ss_pred CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhccCCC
Q 002186 913 SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKLLSGLKPH 953 (955)
Q Consensus 913 ~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~L~~~~~~ 953 (955)
. ....++.+++.+||+.||++|||++|++++|+.+...
T Consensus 266 ~---~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 266 I---GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp S---SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred C---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 0 1123467888999999999999999999999987643
No 272
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.9e-34 Score=317.96 Aligned_cols=249 Identities=19% Similarity=0.267 Sum_probs=182.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC-CCcEEEEEEeeccc-chHHHHHHHHHHHhccCCCCceeEeEEEE----------
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHKNLIRLLGFCY---------- 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~niv~l~g~~~---------- 756 (955)
.+|. ..+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++++++|||||++++++.
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 11 SRYM--DLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTEE--EEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred Ccee--EEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 3455 7889999999999999965 69999999987543 34567889999999999999999999884
Q ss_pred ----cCCeeEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECc
Q 002186 757 ----NRHQAYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAE 830 (955)
Q Consensus 757 ----~~~~~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~D 830 (955)
+.+..++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999998 699999976 567888899999999999999999 999999999999997 567999999
Q ss_pred ccccccccccCC-----CCcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccc---
Q 002186 831 FGFKYLTQLADG-----SFPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLG--- 901 (955)
Q Consensus 831 fGl~~~~~~~~~-----~~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~--- 901 (955)
||+++....... ....+..+|.+||.... ..++.++|||||||++|||+||+.||........ ......
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~ 242 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ--MQLILESIP 242 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH--HHHHHHHSC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcC
Confidence 999876532211 11123556788887654 6788999999999999999999999874432110 000000
Q ss_pred --------cc-------ccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 902 --------EM-------YNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 902 --------~~-------~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+. ............ .....++.+++.+||+.||++|||++|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 00 000000000000 112456789999999999999999999986
No 273
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.7e-34 Score=328.43 Aligned_cols=246 Identities=19% Similarity=0.209 Sum_probs=181.6
Q ss_pred chhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCceeEeEEEEcC----C--eeEEEEe
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLIRLLGFCYNR----H--QAYLLYD 766 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~----~--~~~lv~e 766 (955)
...+.||+|+||.||+|+. .+|+.||||++.... +...+|++++++++|||||+++++|... + ..++|||
T Consensus 57 ~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 57 TDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred EeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 3788999999999999996 579999999986532 2234689999999999999999998642 2 3679999
Q ss_pred ecCCCChhHHhh------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-CCceECcccccccccc
Q 002186 767 YLPNGNLSEKIR------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-MEPHLAEFGFKYLTQL 839 (955)
Q Consensus 767 y~~~gsL~~~l~------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-~~~ki~DfGl~~~~~~ 839 (955)
|+++ ++.+.+. ..+++.....++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++....
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9985 6766654 2568888999999999999999998 99999999999999965 5689999999976543
Q ss_pred cCCC-CcccccccCchhhhhcc-CCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccc-cc--------ccccc---cc
Q 002186 840 ADGS-FPAKIAWTESGEFYNAM-KEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPI-DG--------LLGEM---YN 905 (955)
Q Consensus 840 ~~~~-~~~~~~~~~~~e~~~~~-~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~-~~--------~~~~~---~~ 905 (955)
.... ...++.+|.+||+..+. .++.++|||||||++|||+||+.||........... .. .+..+ +.
T Consensus 210 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~ 289 (420)
T 1j1b_A 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 289 (420)
T ss_dssp TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCC
T ss_pred CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhh
Confidence 2221 22356678899987654 789999999999999999999999875432110000 00 00000 00
Q ss_pred ccccCC--CCchH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 906 ENEVGS--SSSLQ-----DEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 906 ~~~~~~--~~~~~-----~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
....+. ...+. ....++.+++.+||+.||++|||+.|++++
T Consensus 290 ~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 290 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp CCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 000000 00011 123568899999999999999999999863
No 274
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.2e-34 Score=324.38 Aligned_cols=252 Identities=19% Similarity=0.216 Sum_probs=189.3
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHHHHhccCCCCceeEeEEEEcC-----Ce
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFITRIGTVRHKNLIRLLGFCYNR-----HQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~~l~~l~H~niv~l~g~~~~~-----~~ 760 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|++++++++|||||++++++... ..
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 11 SDFQ--LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp TTEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cceE--EeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 4466 788999999999999995 5799999999964322 345678899999999999999999998764 67
Q ss_pred eEEEEeecCCCChhHHhhc-CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 AYLLYDYLPNGNLSEKIRT-KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~-~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 899999997 699998875 578999999999999999999999 999999999999999999999999999876432
Q ss_pred cCCC------------CcccccccCchhhhhc-cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCc------------
Q 002186 840 ADGS------------FPAKIAWTESGEFYNA-MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNK------------ 894 (955)
Q Consensus 840 ~~~~------------~~~~~~~~~~~e~~~~-~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~------------ 894 (955)
.... ...++..|.+||.... ..++.++||||+||++|||++|+.||.........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 244 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHS 244 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCS
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCch
Confidence 2110 1124556788887654 67889999999999999999999998743210000
Q ss_pred --cc----cccccccccccccCCCCch----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 895 --PI----DGLLGEMYNENEVGSSSSL----QDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 895 --~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
.. .....+.....+....... +.....+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 245 DNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp TTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 0000000000000000000 1223567789999999999999999999873
No 275
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=2.2e-34 Score=318.74 Aligned_cols=243 Identities=18% Similarity=0.192 Sum_probs=169.0
Q ss_pred hhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc--hHHHHHHHHH-HHhccCCCCceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT--RIKIVSEFIT-RIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~e~~-~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.||+|+||.||+|.. .+|+.||||+++.... ....+..|+. +++.++|||||++++++.+++..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 778899999999999996 5899999999975432 2334444444 77889999999999999999999999999984
Q ss_pred CChhHHhh-------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 771 GNLSEKIR-------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 771 gsL~~~l~-------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
+|.+++. ...++.....++.|+++||+|||+. ++|+||||||+||+++.++.+||+|||+++........
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 182 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC-------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccc
Confidence 8887775 2567888999999999999999984 27999999999999999999999999998765432221
Q ss_pred -CcccccccCchhhh----hccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCC-CCchHH
Q 002186 844 -FPAKIAWTESGEFY----NAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGS-SSSLQD 917 (955)
Q Consensus 844 -~~~~~~~~~~~e~~----~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 917 (955)
...++..|.+||.. ....++.++|||||||++|||+||+.||.......... ........... ......
T Consensus 183 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 257 (327)
T 3aln_A 183 TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQL-----TQVVKGDPPQLSNSEERE 257 (327)
T ss_dssp -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CCCCCSCCCCCCCCSSCC
T ss_pred ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHH-----HHHhcCCCCCCCCccccc
Confidence 12345567888887 45568889999999999999999999987432211111 11111100000 000111
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 918 EIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 918 ~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
....+.+++.+||+.||++|||++|+++
T Consensus 258 ~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 258 FSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 2345778999999999999999999975
No 276
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5e-34 Score=327.69 Aligned_cols=240 Identities=18% Similarity=0.187 Sum_probs=180.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCCCh
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
..+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++.+++..++|||||. |+|
T Consensus 19 ~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 19 SEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred ccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 45789999999998776678999999998743 234567899999876 89999999999999999999999995 799
Q ss_pred hHHhhcCCC---------HHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCC-------------CCceECcc
Q 002186 774 SEKIRTKRD---------WAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDEN-------------MEPHLAEF 831 (955)
Q Consensus 774 ~~~l~~~~~---------~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~-------------~~~ki~Df 831 (955)
.+++..... +.....++.|++.||+|||+. +|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 999976321 123467999999999999999 99999999999999654 48999999
Q ss_pred cccccccccCCC------CcccccccCchhhhhc-------cCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCcccc
Q 002186 832 GFKYLTQLADGS------FPAKIAWTESGEFYNA-------MKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPID 897 (955)
Q Consensus 832 Gl~~~~~~~~~~------~~~~~~~~~~~e~~~~-------~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~ 897 (955)
|+++........ ...++..|.+||+..+ ..++.++|||||||++|||+| |+.||....... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----H
Confidence 999765433211 1235666889998865 568899999999999999999 888875332111 0
Q ss_pred ccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 898 GLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
............. .........++.+++.+||+.||++|||+.||++
T Consensus 249 ~i~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 NIIRGIFSLDEMK-CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HHHHTCCCCCCCT-TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHhcCCCCccccc-ccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111111111010 1112345567889999999999999999999986
No 277
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=5.4e-34 Score=315.41 Aligned_cols=252 Identities=20% Similarity=0.269 Sum_probs=187.2
Q ss_pred hhcccchhhhccCCCCCceEEEeC--CCCcEEEEEEeecccc---hHHHHHHHHHHHhcc---CCCCceeEeEEEE----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL--PTGITVSVKKIEWGAT---RIKIVSEFITRIGTV---RHKNLIRLLGFCY---- 756 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~--~~g~~vAvK~~~~~~~---~~~~~~~e~~~l~~l---~H~niv~l~g~~~---- 756 (955)
+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|+++++++ +||||++++++|.
T Consensus 11 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 11 QQYE--CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred hcee--eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3455 888999999999999986 5789999999975322 123455666666655 8999999999997
Q ss_pred -cCCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcc
Q 002186 757 -NRHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEF 831 (955)
Q Consensus 757 -~~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~Df 831 (955)
.....++||||++ |+|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Df 164 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecC
Confidence 4567899999998 699999875 268889999999999999999999 9999999999999999999999999
Q ss_pred cccccccccCC-CCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCC---------------Ccc
Q 002186 832 GFKYLTQLADG-SFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQ---------------NKP 895 (955)
Q Consensus 832 Gl~~~~~~~~~-~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~---------------~~~ 895 (955)
|+++....... ....+...|.+||......++.++|||||||++|||+||+.||....... .|.
T Consensus 165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 244 (326)
T 1blx_A 165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244 (326)
T ss_dssp CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence 99876432221 11224556888999888889999999999999999999999987432110 000
Q ss_pred ccccc-ccccccccc-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 896 IDGLL-GEMYNENEV-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 896 ~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
..... ......... ............+.+++.+||+.||++|||++|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp TTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00000 000000000 0000011223457789999999999999999999963
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=8.7e-33 Score=313.73 Aligned_cols=337 Identities=21% Similarity=0.248 Sum_probs=200.1
Q ss_pred CCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEE
Q 002186 171 QLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYL 250 (955)
Q Consensus 171 ~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L 250 (955)
.+.+|++|++++|.++...+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..|..++++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 35677777777777765444446677777777777777765555555555555555555555554444444445555555
Q ss_pred eccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 251 DIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 251 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
++++|.++ ...+..|..+++|++|++++|++++..|..|..+++|+.|++++|+++
T Consensus 123 ~L~~n~l~------------------------~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 178 (390)
T 3o6n_A 123 VLERNDLS------------------------SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 178 (390)
T ss_dssp ECCSSCCC------------------------CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCS
T ss_pred ECCCCccC------------------------cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCC
Confidence 55554444 333333344444444444444444444444445555555555555444
Q ss_pred CCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCcc
Q 002186 331 GTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLS 410 (955)
Q Consensus 331 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~ 410 (955)
+. .+..+++|+.|++++|.+++. ....+|+.|++++|.+... |..
T Consensus 179 ~~---~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~-~~~-------------------------- 223 (390)
T 3o6n_A 179 HV---DLSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSINVV-RGP-------------------------- 223 (390)
T ss_dssp BC---CGGGCTTCSEEECCSSCCSEE-----ECCSSCSEEECCSSCCCEE-ECC--------------------------
T ss_pred cc---ccccccccceeeccccccccc-----CCCCcceEEECCCCeeeec-ccc--------------------------
Confidence 32 123345555555555555431 1223566666666655422 211
Q ss_pred CCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCcccc
Q 002186 411 NCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQN 490 (955)
Q Consensus 411 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~ 490 (955)
..++|+.|++++|++++. ..+..+++|++|++++|.+++..|..+..+++|++|++++| .+
T Consensus 224 ~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n-~l---------------- 284 (390)
T 3o6n_A 224 VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNN-RL---------------- 284 (390)
T ss_dssp CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSS-CC----------------
T ss_pred ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCC-cC----------------
Confidence 124566666666666543 35666666666666666666655555555555555555555 11
Q ss_pred ccCcccccCCCCCCCCcCCccceEeccccccccccCCCCCcccccceeeeccccccccchhhhcCCCCCcEEECCCCCCc
Q 002186 491 FSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESVSNCVELERIDLANNKLIGSIPEVLARLPVLGVLDLSHNSLS 570 (955)
Q Consensus 491 l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 570 (955)
+ .+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++
T Consensus 285 -------------------------------~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~ 331 (390)
T 3o6n_A 285 -------------------------------V-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 331 (390)
T ss_dssp -------------------------------C-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred -------------------------------c-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccc
Confidence 1 12333455677888888888887 56667888899999999999998
Q ss_pred cccCCCcCCCCCCcEEECCCCcceeccCCcccccccCCCccCCCCCCCCCCC
Q 002186 571 GQIPAKFGSCSSLTVLNVSFNDISGSIPSGKVLRLMGSSAYAGNPKLCGAPL 622 (955)
Q Consensus 571 ~~~p~~~~~l~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lcg~~l 622 (955)
... +..+++|++|++++|++++... ...+..+....+.+++..|..+.
T Consensus 332 ~~~---~~~~~~L~~L~l~~N~~~~~~~-~~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 332 TLK---LSTHHTLKNLTLSHNDWDCNSL-RALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp CCC---CCTTCCCSEEECCSSCEEHHHH-HHHTTTCCTTTBCCCCSCCCTTC
T ss_pred eeC---chhhccCCEEEcCCCCccchhH-HHHHHHHHhhcccccCceecccc
Confidence 653 6778899999999999987533 23455556666778888887543
No 279
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.2e-34 Score=319.53 Aligned_cols=237 Identities=16% Similarity=0.145 Sum_probs=188.8
Q ss_pred hhcccchhhhccCCCCCceEEEe-CCCCcEEEEEEeecccc-------hHHHHHHHHHHHhccC--CCCceeEeEEEEcC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGAT-------RIKIVSEFITRIGTVR--HKNLIRLLGFCYNR 758 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~ 758 (955)
+.|. ..+.||+|+||.||+|+ ..+|+.||||+++.... ..+.+.+|++++++++ ||||+++++++.++
T Consensus 43 ~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 43 SQYQ--VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp TTEE--EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred CceE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 3455 78899999999999998 46899999999975421 1244667899999986 59999999999999
Q ss_pred CeeEEEEeecCC-CChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECccccc
Q 002186 759 HQAYLLYDYLPN-GNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEFGFK 834 (955)
Q Consensus 759 ~~~~lv~ey~~~-gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~DfGl~ 834 (955)
+..++||||+.+ ++|.+++.. ..++.....++.|+++||+|||+. +|+||||||+||+++ .++.+||+|||++
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 999999999986 899999875 568888999999999999999999 999999999999999 7889999999998
Q ss_pred ccccccCCCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCC
Q 002186 835 YLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSS 913 (955)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (955)
+...........++..|.+||+.....+ +.++|||||||++|||+||+.||..... ..... .....
T Consensus 198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------------~~~~~-~~~~~ 264 (320)
T 3a99_A 198 ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------------IIRGQ-VFFRQ 264 (320)
T ss_dssp EECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHHCC-CCCSS
T ss_pred cccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------------hhccc-ccccc
Confidence 7654332222335566888898876655 6789999999999999999999863211 00000 00011
Q ss_pred chHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 914 SLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 914 ~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ...++.+++.+||+.||++|||++|+++.
T Consensus 265 ~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 265 R---VSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp C---CCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred c---CCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1 12456788999999999999999999873
No 280
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=4e-34 Score=312.18 Aligned_cols=231 Identities=16% Similarity=0.207 Sum_probs=175.0
Q ss_pred hhhHhhhcccchh-hhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHH-hccCCCCceeEeEEEEc---
Q 002186 684 ANDVLRSFNSTEC-EEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRI-GTVRHKNLIRLLGFCYN--- 757 (955)
Q Consensus 684 ~~~~~~~~~~~~~-~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l-~~l~H~niv~l~g~~~~--- 757 (955)
..++.+.|. .. +.||+|+||.||+|.. .+|+.||||+++.. ..+.+|++++ +..+||||+++++++..
T Consensus 12 ~~~~~~~y~--~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 12 KNAIIDDYK--VTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp CSCGGGTEE--EEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred ccccccchh--hcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 344555565 54 6799999999999985 68999999999642 3456777777 56689999999999876
Q ss_pred -CCeeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCC---CCCceEC
Q 002186 758 -RHQAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDE---NMEPHLA 829 (955)
Q Consensus 758 -~~~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~---~~~~ki~ 829 (955)
.+..++||||+++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++. ++.+||+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEe
Confidence 6678999999999999999975 368889999999999999999999 9999999999999998 7889999
Q ss_pred cccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccccccccc
Q 002186 830 EFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEV 909 (955)
Q Consensus 830 DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (955)
|||++.... ...++.++||||+||++|||+||+.||.......... .......... .
T Consensus 163 Dfg~a~~~~--------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~--~~~~~~~~~~-~ 219 (299)
T 3m2w_A 163 DFGFAKETT--------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP--GMKTRIRMGQ-Y 219 (299)
T ss_dssp CCTTCEECT--------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C--CSCCSSCTTC-C
T ss_pred ccccccccc--------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH--HHHHHHhhcc-c
Confidence 999985432 1235667899999999999999999997433211100 0000110000 0
Q ss_pred CCC-CchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 910 GSS-SSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 910 ~~~-~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... +........+.+++.+||+.||++|||++|++++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 220 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 000 0011234567889999999999999999999863
No 281
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.4e-34 Score=313.46 Aligned_cols=241 Identities=16% Similarity=0.154 Sum_probs=185.4
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeeccc---chHHHHHHHHHHHhccC--CCCceeEeEEEEcCCeeEEEE
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA---TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~~~~~lv~ 765 (955)
|. ..+.||+|+||.||+|...+|+.||||++.... ...+.+.+|++++++++ ||||+++++++.+++..++||
T Consensus 30 y~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 30 YS--ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EE--EEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred EE--EEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 55 788999999999999999899999999996532 23567889999999997 499999999999999999999
Q ss_pred eecCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCC
Q 002186 766 DYLPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGS 843 (955)
Q Consensus 766 ey~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~ 843 (955)
| +.+|+|.+++.. ..++.++..++.|+++||+|||+. +|+||||||+||++++ +.+||+|||+++........
T Consensus 108 e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~ 182 (313)
T 3cek_A 108 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTS 182 (313)
T ss_dssp C-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC-------
T ss_pred e-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccCcccc
Confidence 9 567899999975 467888999999999999999999 9999999999999964 88999999998765432211
Q ss_pred ----CcccccccCchhhhhc-----------cCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccc
Q 002186 844 ----FPAKIAWTESGEFYNA-----------MKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENE 908 (955)
Q Consensus 844 ----~~~~~~~~~~~e~~~~-----------~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 908 (955)
...+...|.+||.... ..++.++|||||||++|||+||+.||....... .......++..
T Consensus 183 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-----~~~~~~~~~~~ 257 (313)
T 3cek_A 183 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI-----SKLHAIIDPNH 257 (313)
T ss_dssp -------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHCTTS
T ss_pred ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH-----HHHHHHHhccc
Confidence 1224566788888764 467889999999999999999999986432110 01111111110
Q ss_pred c-CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 909 V-GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 909 ~-~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
. ..... ....+.+++.+||+.||++|||++|+++.
T Consensus 258 ~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 258 EIEFPDI---PEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp CCCCCCC---SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccCCccc---chHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 0 00111 12456788899999999999999999863
No 282
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.5e-34 Score=323.27 Aligned_cols=251 Identities=15% Similarity=0.167 Sum_probs=190.5
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccchHHHHHHHHHHHhccC-----------CCCceeEeEEEEc
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----------HKNLIRLLGFCYN 757 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----------H~niv~l~g~~~~ 757 (955)
.|. ..+.||+|+||+||+|+. .+|+.||||++.......+.+.+|++++++++ ||||+++++++..
T Consensus 20 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 20 RYI--LVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TEE--EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred eEE--EEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 355 788999999999999994 68999999999866555677888999988876 8999999999886
Q ss_pred CC----eeEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC------CC
Q 002186 758 RH----QAYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD------EN 823 (955)
Q Consensus 758 ~~----~~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~------~~ 823 (955)
.+ ..++||||+ +|+|.+++.. ..++.....++.|++.||+|||+.+ +|+||||||+||+++ ..
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcCc
Confidence 44 789999999 8999999864 3688899999999999999999853 899999999999994 44
Q ss_pred CCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccccccccc
Q 002186 824 MEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEM 903 (955)
Q Consensus 824 ~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~ 903 (955)
+.+||+|||+++....... ...++..|.+||...+..++.++|||||||++|||+||+.||..............+..+
T Consensus 175 ~~~kl~Dfg~a~~~~~~~~-~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 253 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHYT-NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253 (373)
T ss_dssp EEEEECCCTTCEETTBCCC-SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHH
T ss_pred ceEEEcccccccccCCCCC-CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHH
Confidence 5799999999876543322 223556688999998888999999999999999999999999743211100000000000
Q ss_pred ---------------------ccc----------cc-------cCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 904 ---------------------YNE----------NE-------VGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 904 ---------------------~~~----------~~-------~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
+.. .. .............+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 254 IELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred HHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 000 00 0000112345677889999999999999999999987
Q ss_pred H
Q 002186 946 L 946 (955)
Q Consensus 946 ~ 946 (955)
+
T Consensus 334 h 334 (373)
T 1q8y_A 334 H 334 (373)
T ss_dssp C
T ss_pred C
Confidence 3
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=5.2e-33 Score=333.06 Aligned_cols=308 Identities=15% Similarity=0.114 Sum_probs=265.8
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
.+++++.|++++|.+....+..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46899999999999998777778999999999999999999888899999999999999999999888899999999999
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
+|++|.+++..+..++.+++|++|++++|.+.+..|..++++++|++|++++|.+++.. ++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99999999766666799999999999999999988888999999999999999998753 556788999999999887
Q ss_pred ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccC
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (955)
+. ....+|+.|++++|.++...+ .+ .++|+.|++++|.+++ +..+..+++|+.|++++|.+++..|..++
T Consensus 206 ~l-----~~~~~L~~L~ls~n~l~~~~~-~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~ 275 (597)
T 3oja_B 206 TL-----AIPIAVEELDASHNSINVVRG-PV--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFV 275 (597)
T ss_dssp EE-----ECCTTCSEEECCSSCCCEEEC-SC--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGT
T ss_pred cc-----cCCchhheeeccCCccccccc-cc--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhc
Confidence 53 345678999999999875433 22 3678999999999886 36788888899999999998888888888
Q ss_pred CCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEE
Q 002186 363 RNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYI 442 (955)
Q Consensus 363 ~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 442 (955)
.+++|+.|++++|.+++ +| ..+..+++|+.|+|++|+++ .+|..+..+++|++|
T Consensus 276 ~l~~L~~L~Ls~N~l~~-l~------------------------~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L 329 (597)
T 3oja_B 276 KMQRLERLYISNNRLVA-LN------------------------LYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENL 329 (597)
T ss_dssp TCSSCCEEECTTSCCCE-EE------------------------CSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEE
T ss_pred CccCCCEEECCCCCCCC-CC------------------------cccccCCCCcEEECCCCCCC-ccCcccccCCCCCEE
Confidence 88888888888888764 23 23455789999999999999 678888999999999
Q ss_pred ECCCCcCCCCCCcchhhccCCcccccCCCC
Q 002186 443 DLSRNGFTGGIPTDINQASKLEYFNVSNNP 472 (955)
Q Consensus 443 ~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~ 472 (955)
+|++|++++. | +..+++|++|++++|+
T Consensus 330 ~L~~N~l~~~-~--~~~~~~L~~L~l~~N~ 356 (597)
T 3oja_B 330 YLDHNSIVTL-K--LSTHHTLKNLTLSHND 356 (597)
T ss_dssp ECCSSCCCCC-C--CCTTCCCSEEECCSSC
T ss_pred ECCCCCCCCc-C--hhhcCCCCEEEeeCCC
Confidence 9999999865 3 6677899999999994
No 284
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=311.68 Aligned_cols=244 Identities=15% Similarity=0.168 Sum_probs=171.2
Q ss_pred hcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccch---HHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 690 SFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGATR---IKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 690 ~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~~---~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.|. ..+.||+|+||.||+|.. .+|+.||||++...... .+.+.++..+++.++||||+++++++.+++..++||
T Consensus 26 ~y~--~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 26 DLE--NLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GEE--EEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred ccc--ccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 455 778899999999999996 48999999999754322 334555566788899999999999999999999999
Q ss_pred eecCCCChhHHhh---cCCCHHHHHHHHHHHHHHHHHHhc-CCCCCcccCCCCCCCeeeCCCCCceECcccccccccccC
Q 002186 766 DYLPNGNLSEKIR---TKRDWAAKYKIVLGVARGLCFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLAD 841 (955)
Q Consensus 766 ey~~~gsL~~~l~---~~~~~~~~~~i~~~ia~gl~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~ 841 (955)
||+ ++.+..+.. ...++.....++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 455555443 356888899999999999999998 5 89999999999999999999999999986543322
Q ss_pred CC-CcccccccCchhhhh-----ccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 842 GS-FPAKIAWTESGEFYN-----AMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 842 ~~-~~~~~~~~~~~e~~~-----~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
.. ...+...|.+||... ...++.++|||||||++|||+||+.||....... ............. .+..
T Consensus 180 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~~~~~~~~~-~~~~ 253 (318)
T 2dyl_A 180 AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF-----EVLTKVLQEEPPL-LPGH 253 (318)
T ss_dssp -------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH-----HHHHHHHHSCCCC-CCSS
T ss_pred cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH-----HHHHHHhccCCCC-CCcc
Confidence 11 122455578888874 4567889999999999999999999986432111 0111111111000 0100
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++|+++
T Consensus 254 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 254 MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 112345778889999999999999999985
No 285
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=325.75 Aligned_cols=239 Identities=17% Similarity=0.181 Sum_probs=175.4
Q ss_pred chhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 694 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
...+.||+|+||+||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++.+.+..|+|||||+ |+
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~ 103 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-AT 103 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EE
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CC
Confidence 37789999999996655556899999999964322 2345789999988 79999999999999999999999996 69
Q ss_pred hhHHhhcC---CCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-----CCCCceECcccccccccccCC--
Q 002186 773 LSEKIRTK---RDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-----ENMEPHLAEFGFKYLTQLADG-- 842 (955)
Q Consensus 773 L~~~l~~~---~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-----~~~~~ki~DfGl~~~~~~~~~-- 842 (955)
|.+++... ..+.+...++.|+++||+|||+. +|+||||||+||+++ ....+||+|||+++.......
T Consensus 104 L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~ 180 (432)
T 3p23_A 104 LQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSF 180 (432)
T ss_dssp HHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-------
T ss_pred HHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcce
Confidence 99999763 23445678999999999999999 999999999999994 334688999999876543221
Q ss_pred ---CCcccccccCchhhhh---ccCCcccccchhHHHHHHHHHh-CCCCCCCCCCCCCccccccccccccccccCCCCch
Q 002186 843 ---SFPAKIAWTESGEFYN---AMKEEMYMDVYGFGEIILEILT-NGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSL 915 (955)
Q Consensus 843 ---~~~~~~~~~~~~e~~~---~~~~~~~~DV~S~Gvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (955)
....++.+|.+||+.. ...++.++||||+||++|||+| |..||....... ........ ..... ...
T Consensus 181 ~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~---~~~~~~~~-~~~~~---~~~ 253 (432)
T 3p23_A 181 SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ---ANILLGAC-SLDCL---HPE 253 (432)
T ss_dssp -----CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH---HHHHTTCC-CCTTS---CTT
T ss_pred eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH---HHHHhccC-Ccccc---Ccc
Confidence 1122566788899886 4567789999999999999999 777764321110 00000000 00001 111
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 916 QDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 916 ~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
......+.+++.+||+.||++|||++||++
T Consensus 254 ~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 254 KHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 123345778999999999999999999984
No 286
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=315.91 Aligned_cols=238 Identities=16% Similarity=0.151 Sum_probs=182.8
Q ss_pred hhhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeecccc-------hHHHHHHHHHHHhcc----CCCCceeEeEEE
Q 002186 688 LRSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGAT-------RIKIVSEFITRIGTV----RHKNLIRLLGFC 755 (955)
Q Consensus 688 ~~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~e~~~l~~l----~H~niv~l~g~~ 755 (955)
.+.|. ..+.||+|+||.||+|.. .+|+.||||+++.... ....+.+|++++.++ +||||+++++++
T Consensus 30 ~~~y~--~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 30 EAEYR--LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp ---CE--EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhceE--EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 34566 788999999999999985 5789999999965322 122345688888888 899999999999
Q ss_pred EcCCeeEEEEee-cCCCChhHHhhc--CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeC-CCCCceECcc
Q 002186 756 YNRHQAYLLYDY-LPNGNLSEKIRT--KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFD-ENMEPHLAEF 831 (955)
Q Consensus 756 ~~~~~~~lv~ey-~~~gsL~~~l~~--~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~-~~~~~ki~Df 831 (955)
.+.+..++|||| +++|+|.+++.. ..++..+..++.|+++||+|||+. +|+||||||+||+++ .++.+||+||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~df 184 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDF 184 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEc
Confidence 999999999999 789999999975 478999999999999999999999 999999999999999 8899999999
Q ss_pred cccccccccCCCCcccccccCchhhhhccCC-cccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccC
Q 002186 832 GFKYLTQLADGSFPAKIAWTESGEFYNAMKE-EMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVG 910 (955)
Q Consensus 832 Gl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (955)
|+++...........+...|.+||+.....+ +.++||||+||++|||+||+.||..... ..... ..
T Consensus 185 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------------~~~~~-~~ 251 (312)
T 2iwi_A 185 GSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------------ILEAE-LH 251 (312)
T ss_dssp SSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------------HHHTC-CC
T ss_pred chhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------------Hhhhc-cC
Confidence 9987654433222334556888898766555 4589999999999999999999863211 00000 00
Q ss_pred CCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 002186 911 SSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALKL 946 (955)
Q Consensus 911 ~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~~ 946 (955)
... .....+.+++.+||+.||++|||++|++++
T Consensus 252 ~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 252 FPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred Ccc---cCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011 122456788999999999999999999973
No 287
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-33 Score=316.70 Aligned_cols=250 Identities=16% Similarity=0.170 Sum_probs=190.9
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCC-cEEEEEEeecccchHHHHHHHHHHHhccCCCC------ceeEeEEEEcCCe
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTG-ITVSVKKIEWGATRIKIVSEFITRIGTVRHKN------LIRLLGFCYNRHQ 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g-~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n------iv~l~g~~~~~~~ 760 (955)
++|. ..+.||+|+||+||+|.. .+| +.||||+++......+.+.+|++++++++|++ ++.+.+++...+.
T Consensus 19 ~~y~--~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 19 ERYE--IVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred ccEE--EEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 4466 788999999999999985 344 78999999865555677888999999988776 9999999999999
Q ss_pred eEEEEeecCCCChhHHhhc----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeee----------------
Q 002186 761 AYLLYDYLPNGNLSEKIRT----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVF---------------- 820 (955)
Q Consensus 761 ~~lv~ey~~~gsL~~~l~~----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl---------------- 820 (955)
.++||||+ +|++.+++.. ..++.+...++.|+++||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~ 172 (355)
T 2eu9_A 97 MCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCE 172 (355)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCC
T ss_pred EEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccccc
Confidence 99999999 6677777754 368899999999999999999998 99999999999999
Q ss_pred ---CCCCCceECcccccccccccCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcccc
Q 002186 821 ---DENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPID 897 (955)
Q Consensus 821 ---~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~ 897 (955)
+.++.+||+|||+++....... ...++..|.+||...+..++.++||||+||++|||+||+.||............
T Consensus 173 ~~~~~~~~~kl~Dfg~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 251 (355)
T 2eu9_A 173 EKSVKNTSIRVADFGSATFDHEHHT-TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM 251 (355)
T ss_dssp EEEESCCCEEECCCTTCEETTSCCC-SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccCCCcEEEeecCcccccccccc-CCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 5678999999999876443322 223556688999998888999999999999999999999998743211100000
Q ss_pred -ccccc-------------c-ccccc-c------------------CCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 898 -GLLGE-------------M-YNENE-V------------------GSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 898 -~~~~~-------------~-~~~~~-~------------------~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
..... . ..... . ............+.+++.+||+.||++|||++|+
T Consensus 252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 331 (355)
T 2eu9_A 252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA 331 (355)
T ss_dssp HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00000 0 00000 0 0000011234578899999999999999999999
Q ss_pred HH
Q 002186 944 LK 945 (955)
Q Consensus 944 ~~ 945 (955)
++
T Consensus 332 l~ 333 (355)
T 2eu9_A 332 LL 333 (355)
T ss_dssp TT
T ss_pred hc
Confidence 85
No 288
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.8e-32 Score=303.37 Aligned_cols=302 Identities=25% Similarity=0.330 Sum_probs=182.0
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +..+++|++|++++|.++. + +.+.++++|++|+
T Consensus 43 l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~L~ 116 (347)
T 4fmz_A 43 LESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRELY 116 (347)
T ss_dssp HTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSEEE
T ss_pred cccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCEEE
Confidence 4555666666655543 22 25555566666666655553322 5555555555555555553 2 2355555555555
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..+ +..+++|++|++++|.... .++. +.++++|++|++++|.+.+
T Consensus 117 l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~------------------------~~~~-~~~l~~L~~L~l~~~~~~~ 169 (347)
T 4fmz_A 117 LNEDNISDISP--LANLTKMYSLNLGANHNLS------------------------DLSP-LSNMTGLNYLTVTESKVKD 169 (347)
T ss_dssp CTTSCCCCCGG--GTTCTTCCEEECTTCTTCC------------------------CCGG-GTTCTTCCEEECCSSCCCC
T ss_pred CcCCcccCchh--hccCCceeEEECCCCCCcc------------------------cccc-hhhCCCCcEEEecCCCcCC
Confidence 55555543222 4555555555555553332 2222 4555555666666655554
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..
T Consensus 170 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~ 241 (347)
T 4fmz_A 170 VTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LAN 241 (347)
T ss_dssp CGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred chh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhc
Confidence 322 5556666666666666654322 5566666666666666665433 5666666666666666664433 666
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+++|+.|++++|.+++. +.+..+++|+.|++++|.+++. +.+..+++|+.|+
T Consensus 242 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--------------------------~~~~~l~~L~~L~ 293 (347)
T 4fmz_A 242 LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--------------------------SVLNNLSQLNSLF 293 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--------------------------GGGGGCTTCSEEE
T ss_pred CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--------------------------hhhcCCCCCCEEE
Confidence 66777777777666542 3455666666666666665421 2355677888888
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCC
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNP 472 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~ 472 (955)
+++|++++..|..+..+++|++|++++|++++..| +..+++|++|++++|+
T Consensus 294 L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 294 LNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQV 344 (347)
T ss_dssp CCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC-
T ss_pred CcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhc
Confidence 88888888888888888888888888888887655 7778888888888883
No 289
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.1e-33 Score=332.85 Aligned_cols=250 Identities=14% Similarity=0.074 Sum_probs=187.5
Q ss_pred hhcccchhhhccCCCCCceEEEeC-CCCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEc------CC
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVL-PTGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYN------RH 759 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~------~~ 759 (955)
..|. ..+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|++++++++|||||++++++.. .+
T Consensus 14 grY~--i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 14 GPWE--MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ---C--CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCeE--EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 4566 888999999999999996 579999999987532 235678899999999999999999999765 66
Q ss_pred eeEEEEeecCCCChhHHhhc-----CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC---ceECcc
Q 002186 760 QAYLLYDYLPNGNLSEKIRT-----KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME---PHLAEF 831 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~-----~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~---~ki~Df 831 (955)
..++|||||++|+|.+++.. ..++.....++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 78999999999999999976 367888899999999999999998 9999999999999997665 899999
Q ss_pred cccccccccCCC-CcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCcc------------ccc
Q 002186 832 GFKYLTQLADGS-FPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKP------------IDG 898 (955)
Q Consensus 832 Gl~~~~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~------------~~~ 898 (955)
|+++........ ...++..|.+||...+..++.++||||+||++|||+||+.||........|. ...
T Consensus 169 G~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~ 248 (676)
T 3qa8_A 169 GYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248 (676)
T ss_dssp CCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCC
T ss_pred ccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhh
Confidence 998765433221 1234556888999888889999999999999999999999996432111110 000
Q ss_pred cccccc-cccccCC-CCchHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 002186 899 LLGEMY-NENEVGS-SSSLQDEIKLVLDVALLCTRSTPSDRPSMEEA 943 (955)
Q Consensus 899 ~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev 943 (955)
...... .....+. ..........+.+++..||+.||++|||++|+
T Consensus 249 ~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp CCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000000 0000010 11123345678899999999999999999774
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7e-32 Score=301.23 Aligned_cols=302 Identities=20% Similarity=0.320 Sum_probs=195.7
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.++.++++++.+.. ++ .+.. +++|++|++++|.+++..+ +..+++|++|+|++|.++. +| .|..+++|++|+
T Consensus 45 ~L~~L~l~~~~i~~-~~-~~~~--~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~ 116 (347)
T 4fmz_A 45 SITKLVVAGEKVAS-IQ-GIEY--LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELY 116 (347)
T ss_dssp TCSEEECCSSCCCC-CT-TGGG--CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEE
T ss_pred cccEEEEeCCcccc-ch-hhhh--cCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEE
Confidence 46778888877754 33 2444 8899999999999986544 9999999999999999986 34 699999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g 235 (955)
+++|.+++. |. +..+++|++|++++|.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 117 l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 117 LNEDNISDI-SP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC
T ss_pred CcCCcccCc-hh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc
Confidence 999999864 44 89999999999999977655544 9999999999999999876443 6666777777776666553
Q ss_pred CCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCC
Q 002186 236 NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFAD 315 (955)
Q Consensus 236 ~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 315 (955)
..+ +..+++|++|++++|.+.+..+ +..+++|++|++++|++++..+ +..+++|++|++++|.+++.
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~------- 258 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI------- 258 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-------
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-------
Confidence 322 4555555666665555554322 4445555555555555543322 44445555555555544432
Q ss_pred CCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceee
Q 002186 316 LKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLI 395 (955)
Q Consensus 316 l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~ 395 (955)
+.+..+++|+.|++++|.+++. +.+..+++|+.|++++|.+++..|
T Consensus 259 -------------------~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~------------- 304 (347)
T 4fmz_A 259 -------------------NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDM------------- 304 (347)
T ss_dssp -------------------GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGH-------------
T ss_pred -------------------hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcCh-------------
Confidence 2344445555555555554432 234444555555555555443222
Q ss_pred ccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCC
Q 002186 396 LFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT 450 (955)
Q Consensus 396 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 450 (955)
..+..+++|++|++++|++++..| +..+++|++|++++|.++
T Consensus 305 -----------~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 305 -----------EVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -----------HHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred -----------hHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 233445566666666666665544 556666666666666654
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.98 E-value=5.3e-33 Score=337.60 Aligned_cols=236 Identities=15% Similarity=0.168 Sum_probs=185.1
Q ss_pred hhcccchhhhccCCCCCceEEEeCC--CCcEEEEEEeeccc--chHHHHHHHHHHHhccCCCCceeEeEEEEcCCe----
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLP--TGITVSVKKIEWGA--TRIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQ---- 760 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~--~g~~vAvK~~~~~~--~~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~---- 760 (955)
..|. ..+.||+|+||.||+|... +|+.||||++.... ...+.+.+|++++++++|||||+++++|.+.+.
T Consensus 80 ~~y~--i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 80 GQYE--VKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTEE--EEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CceE--EEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 4466 7889999999999999864 68999999986432 235567899999999999999999999987655
Q ss_pred -eEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccc
Q 002186 761 -AYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQL 839 (955)
Q Consensus 761 -~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~ 839 (955)
.|+||||+++|+|.+++....+|.++..|+.|+++||+|||+. +|+||||||+||+++.+ .+||+|||+++....
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~ 233 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS 233 (681)
T ss_dssp EEEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTC
T ss_pred eeEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhccc
Confidence 7999999999999999988899999999999999999999999 99999999999999986 899999999876543
Q ss_pred cCCCCcccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHH
Q 002186 840 ADGSFPAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEI 919 (955)
Q Consensus 840 ~~~~~~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 919 (955)
. ....++..|.+||+.... ++.++|||||||++|||++|..|+..... ... ..........
T Consensus 234 ~--~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~----------~~~------~~~~~~~~~~ 294 (681)
T 2pzi_A 234 F--GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV----------DGL------PEDDPVLKTY 294 (681)
T ss_dssp C--SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC----------SSC------CTTCHHHHHC
T ss_pred C--CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc----------ccc------cccccccccC
Confidence 2 223355668889987664 48899999999999999999877652110 000 0011112233
Q ss_pred HHHHHHHHHccCCCCCCCCC-HHHHHHHhhc
Q 002186 920 KLVLDVALLCTRSTPSDRPS-MEEALKLLSG 949 (955)
Q Consensus 920 ~~~~~l~~~Cl~~dp~~RPt-~~ev~~~L~~ 949 (955)
..+.+++.+||+.||++||+ ++++...|..
T Consensus 295 ~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 295 DSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 56788999999999999995 5555555543
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=2.7e-31 Score=294.35 Aligned_cols=290 Identities=21% Similarity=0.271 Sum_probs=231.7
Q ss_pred CccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccC
Q 002186 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHF 141 (955)
Q Consensus 62 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 141 (955)
.|.|..+.|+.. ++. .+|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..
T Consensus 32 ~c~l~~l~~~~~------------~l~-~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 94 (332)
T 2ft3_A 32 HCHLRVVQCSDL------------GLK-AVPKEI----SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIH 94 (332)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCC----CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred cccCCEEECCCC------------Ccc-ccCCCC----CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccC
Confidence 467777777642 222 334333 357899999999999888889999999999999999999888
Q ss_pred CccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCC--CCCchhccC
Q 002186 142 PGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLN--DQIPAELGM 219 (955)
Q Consensus 142 p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~l~~ 219 (955)
|..|+.+++|++|+|++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++ +..|..+..
T Consensus 95 ~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 171 (332)
T 2ft3_A 95 EKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDG 171 (332)
T ss_dssp GGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCS
T ss_pred HhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccC
Confidence 999999999999999999998 5666655 79999999999998777777999999999999999985 367777887
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEE
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 299 (955)
+ +|+.|++++|.+.+ +|..+. ++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|+
T Consensus 172 l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 247 (332)
T 2ft3_A 172 L-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELH 247 (332)
T ss_dssp C-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEE
T ss_pred C-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEE
Confidence 7 88899999888875 555443 6888888888888887778888888888888888888887777788888888888
Q ss_pred ccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC------CCCccEEEccCCcCc--ccCCcccCCCCCCCeee
Q 002186 300 LSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ------LPSLEILFIWNNYFS--GSLPENLGRNSKLRWVD 371 (955)
Q Consensus 300 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------l~~L~~L~L~~N~l~--~~~p~~~~~~~~L~~L~ 371 (955)
|++|+++ .+|..+..+++|+.|++++|++++..+..+.. .++|+.|++++|.+. +..|..+..+++|+.++
T Consensus 248 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~ 326 (332)
T 2ft3_A 248 LDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQ 326 (332)
T ss_dssp CCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEE
T ss_pred CCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhh
Confidence 8888888 57777888888888888888888766666654 356788888888876 55666777788888888
Q ss_pred cCCCc
Q 002186 372 VSTNN 376 (955)
Q Consensus 372 ls~N~ 376 (955)
+++|+
T Consensus 327 l~~n~ 331 (332)
T 2ft3_A 327 FGNYK 331 (332)
T ss_dssp C----
T ss_pred ccccc
Confidence 87764
No 293
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=8.7e-31 Score=290.06 Aligned_cols=292 Identities=20% Similarity=0.239 Sum_probs=219.2
Q ss_pred CCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
+.|.|..+.|+... +. .+|..+ .+.+++|+|++|.+++..+..|.++++|++|+|++|.+++.
T Consensus 29 c~c~l~~l~~~~~~------------l~-~lp~~~----~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (330)
T 1xku_A 29 CQCHLRVVQCSDLG------------LE-KVPKDL----PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91 (330)
T ss_dssp CEEETTEEECTTSC------------CC-SCCCSC----CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCB
T ss_pred CcCCCeEEEecCCC------------cc-ccCccC----CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCee
Confidence 45778777776521 11 233322 24688999999999988887899999999999999999988
Q ss_pred CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCC--CCchhcc
Q 002186 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND--QIPAELG 218 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l~ 218 (955)
.|..|+.+++|++|+|++|.++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|.++. ..+..+.
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 168 (330)
T 1xku_A 92 SPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 168 (330)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGG
T ss_pred CHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhcc
Confidence 8889999999999999999988 4666554 789999999999988777788899999999999998854 6677788
Q ss_pred CCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEE
Q 002186 219 MLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL 298 (955)
Q Consensus 219 ~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 298 (955)
.+++|++|++++|.+.. +|..+. ++|++|++++|.+++..|..+..+++|++|++++|.+++..+..+..+++|++|
T Consensus 169 ~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 245 (330)
T 1xku_A 169 GMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLREL 245 (330)
T ss_dssp GCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEE
T ss_pred CCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEE
Confidence 88888888888887764 454443 678888888888877777778888888888888888877777777777888888
Q ss_pred EccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC------CCCccEEEccCCcCcc--cCCcccCCCCCCCee
Q 002186 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ------LPSLEILFIWNNYFSG--SLPENLGRNSKLRWV 370 (955)
Q Consensus 299 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~------l~~L~~L~L~~N~l~~--~~p~~~~~~~~L~~L 370 (955)
+|++|+++ .+|.++..+++|++|++++|++++..+..+.. .+.++.|++++|.+.. ..|..+..+.+++.+
T Consensus 246 ~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l 324 (330)
T 1xku_A 246 HLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAV 324 (330)
T ss_dssp ECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGE
T ss_pred ECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEE
Confidence 88888877 56777777888888888888877666555543 2566777777776642 344556666666666
Q ss_pred ecCCCc
Q 002186 371 DVSTNN 376 (955)
Q Consensus 371 ~ls~N~ 376 (955)
++++|+
T Consensus 325 ~L~~N~ 330 (330)
T 1xku_A 325 QLGNYK 330 (330)
T ss_dssp EC----
T ss_pred EecccC
Confidence 666653
No 294
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.97 E-value=1.9e-32 Score=312.50 Aligned_cols=231 Identities=19% Similarity=0.128 Sum_probs=170.2
Q ss_pred hhhhccCCCCCceEEEe-CCCCcEEEEEEeeccc----chHHHHHHHHHHHhccCC-CCce---------e---------
Q 002186 695 ECEEAARPQSAAGCKAV-LPTGITVSVKKIEWGA----TRIKIVSEFITRIGTVRH-KNLI---------R--------- 750 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~e~~~l~~l~H-~niv---------~--------- 750 (955)
..+.||+|+||+||+|+ ..+|+.||||+++... ...+.+.+|+.+++.++| +|.. .
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 66789999999999999 6689999999987322 225678899999999987 3211 1
Q ss_pred ---EeEEEEc-----CCeeEEEEeecCCCChhHHhh---------cCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC
Q 002186 751 ---LLGFCYN-----RHQAYLLYDYLPNGNLSEKIR---------TKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL 813 (955)
Q Consensus 751 ---l~g~~~~-----~~~~~lv~ey~~~gsL~~~l~---------~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl 813 (955)
+..++.. ....+++|+++ +|+|.+++. ..+++..+..++.|+++||+|||+. +|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCc
Confidence 1111111 12457777766 689999984 2346778889999999999999999 9999999
Q ss_pred CCCCeeeCCCCCceECcccccccccccCCCCcccccccCchhhh----------hccCCcccccchhHHHHHHHHHhCCC
Q 002186 814 KASNIVFDENMEPHLAEFGFKYLTQLADGSFPAKIAWTESGEFY----------NAMKEEMYMDVYGFGEIILEILTNGR 883 (955)
Q Consensus 814 k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~----------~~~~~~~~~DV~S~Gvvl~Elltg~~ 883 (955)
||+|||++.++.+||+|||+++....... ...+ ..|.+||+. ....++.++|||||||++|||+||+.
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~-~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~ 315 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGASAV-SPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADL 315 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEEEC-CCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSC
T ss_pred ccceEEEecCCeEEEEeccceeecCCccc-cCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCC
Confidence 99999999999999999999876543322 2234 668899988 44567889999999999999999999
Q ss_pred CCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 002186 884 LTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDRPSMEEALK 945 (955)
Q Consensus 884 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~RPt~~ev~~ 945 (955)
||....... .....+... . .....+.+++.+||+.||++|||+.|+++
T Consensus 316 Pf~~~~~~~------~~~~~~~~~-~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 316 PNTDDAALG------GSEWIFRSC-K-------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp CCCTTGGGS------CSGGGGSSC-C-------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchhh------hHHHHHhhc-c-------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 987433211 111111111 0 11245778899999999999999887754
No 295
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=2.5e-30 Score=286.44 Aligned_cols=291 Identities=21% Similarity=0.270 Sum_probs=233.3
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
+++.++++++.++ .+|..+. ++|++|+|++|++++..+..|+.+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 4678999999987 5666554 689999999999998888899999999999999999998889999999999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc--CCCCccccCCCCCcEEeccCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ--GNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~--g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+|.++ .+|..+. ++|++|++++|.+++..+..+..+++|+.|++++|.+. +..+..+.++++|++|++++|.++.
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 185 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT 185 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc
Confidence 99998 5676654 79999999999999888888999999999999999885 3677788889999999999998874
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+|..+. ++|++|++++|++++..|..|..+++|++|++++|++++..+..|..+++|+.|++++|+++ .+|..+..
T Consensus 186 -l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 186 -IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp -CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred -CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 555443 78888888888888887888888888888888888888777778888888888888888887 67777888
Q ss_pred CCCccEEEccCCcCcccCCcccCCC------CCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCC
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRN------SKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCS 413 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~------~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~ 413 (955)
+++|++|++++|++++..+..|... ..++.+++++|.+.. ....|..|..+.
T Consensus 262 l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~----------------------~~i~~~~f~~~~ 319 (330)
T 1xku_A 262 HKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQY----------------------WEIQPSTFRCVY 319 (330)
T ss_dssp CSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCG----------------------GGSCGGGGTTCC
T ss_pred CCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccc----------------------cccCcccccccc
Confidence 8888888888888876655555322 445555555555431 013455677788
Q ss_pred CCcEEECcCCc
Q 002186 414 SLVRLRLEDNS 424 (955)
Q Consensus 414 ~L~~L~Ls~N~ 424 (955)
+++.++|++|+
T Consensus 320 ~l~~l~L~~N~ 330 (330)
T 1xku_A 320 VRAAVQLGNYK 330 (330)
T ss_dssp CGGGEEC----
T ss_pred ceeEEEecccC
Confidence 88888888875
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.1e-30 Score=287.22 Aligned_cols=293 Identities=24% Similarity=0.282 Sum_probs=202.7
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 205 (955)
+|+++++++|.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|+++++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 6899999999887 5666553 688999999999887777888999999999999999988888889999999999999
Q ss_pred CCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC--CCCCccccCCCCCCEEEeccccccc
Q 002186 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS--GSIPKELSNLTKLESLFLFRNQLAG 283 (955)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~--~~~p~~l~~l~~L~~L~L~~N~l~~ 283 (955)
+|.++ .+|..+. ++|++|++++|.+.+..+..+.++++|++|++++|.++ +..|..+..+ +|++|++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 99887 4565554 67777777777777665666777777777777777774 3556666666 77777777777765
Q ss_pred cCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCC
Q 002186 284 QVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGR 363 (955)
Q Consensus 284 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 363 (955)
+|..+. ++|++|++++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 343332 56777777777777666667777777777777777777666666667777777777777766 56666666
Q ss_pred CCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccc--cccchhccCCCCCCE
Q 002186 364 NSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFS--GEIPLKFSQLPDINY 441 (955)
Q Consensus 364 ~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~ 441 (955)
+++|+.|++++|.+++..+..++... + .....+|+.|++++|.+. +..|..|..+++|+.
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~----------------~--~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~ 324 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVG----------------F--GVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLA 324 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSS----------------C--CSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTT
T ss_pred CccCCEEECCCCCCCccChhHccccc----------------c--ccccccccceEeecCcccccccCcccccccchhhh
Confidence 66677777766666633222221100 0 011345666666666665 445555666666666
Q ss_pred EECCCC
Q 002186 442 IDLSRN 447 (955)
Q Consensus 442 L~Ls~N 447 (955)
+++++|
T Consensus 325 l~l~~n 330 (332)
T 2ft3_A 325 IQFGNY 330 (332)
T ss_dssp EEC---
T ss_pred hhcccc
Confidence 666655
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.9e-34 Score=335.37 Aligned_cols=351 Identities=17% Similarity=0.182 Sum_probs=174.4
Q ss_pred CCCcEEECCCCcCcccCCcc-ccCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEeCCCCCCCCCCchhh-cCCC-
Q 002186 101 NELVDLNLSHNSFSGQFPVE-IFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGSVPAEI-SQLE- 173 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~-~~L~- 173 (955)
++|++|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|||++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34666777777765443332 5566777777777777663 345556666777777777776654333333 2344
Q ss_pred ---cceEEEecCCCCcc----cCCCCcCCCCCCcEEEccCCCCCCCCchhcc-----CCCCCcEEecccccccCC----C
Q 002186 174 ---HLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELG-----MLKTVTHMEIGYNFYQGN----I 237 (955)
Q Consensus 174 ---~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~l~~n~l~g~----~ 237 (955)
+|++|+|++|.++. .+|..|..+++|++|+|++|.+++..+..+. ..++|++|++++|.+++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 57777777776663 4466666777777777777766543333322 234556666665555442 2
Q ss_pred CccccCCCCCcEEeccCCCCCCCCCcccc-----CCCCCCEEEecccccccc----CCccCcCCCccCEEEccCCCCCCC
Q 002186 238 PWQLGNMSEVQYLDIAGANLSGSIPKELS-----NLTKLESLFLFRNQLAGQ----VPWEFSRVTTLKSLDLSDNRLSGP 308 (955)
Q Consensus 238 p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (955)
+..+..+++|++|++++|.+....+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|+++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 33344455555555555554432222221 134555555555555432 233344445555555555554432
Q ss_pred C-----CcccCCCCCCcEEecccccCCCC----CccccCCCCCccEEEccCCcCcccCCcccC-----CCCCCCeeecCC
Q 002186 309 I-----PESFADLKNLRLLSLMYNEMSGT----VPESLVQLPSLEILFIWNNYFSGSLPENLG-----RNSKLRWVDVST 374 (955)
Q Consensus 309 ~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~~~~L~~L~ls~ 374 (955)
. +..+..+++|+.|++++|+++.. ++..+..+++|++|++++|.+++..+..+. ..++|+.|++++
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 322 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKS 322 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCC
Confidence 1 11222344555555555554432 333444445555555555554432221111 113445555554
Q ss_pred CcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccC-----CCCCCEEECCCCcC
Q 002186 375 NNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQ-----LPDINYIDLSRNGF 449 (955)
Q Consensus 375 N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 449 (955)
|.+++.... .++..+..+++|++|++++|++++..+..+.. .++|++|++++|++
T Consensus 323 n~l~~~~~~--------------------~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i 382 (461)
T 1z7x_W 323 CSFTAACCS--------------------HFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDV 382 (461)
T ss_dssp SCCBGGGHH--------------------HHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred CCCchHHHH--------------------HHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCC
Confidence 444432000 02223334455555555555554443332221 34555555555555
Q ss_pred CC----CCCcchhhccCCcccccCCC
Q 002186 450 TG----GIPTDINQASKLEYFNVSNN 471 (955)
Q Consensus 450 ~~----~ip~~~~~~~~L~~L~ls~N 471 (955)
++ .+|..+..+++|++|++++|
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCC
Confidence 43 44444455555555555555
No 298
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=8.7e-32 Score=298.93 Aligned_cols=239 Identities=11% Similarity=0.121 Sum_probs=177.3
Q ss_pred hhcccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccC---------CCCcee
Q 002186 689 RSFNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVR---------HKNLIR 750 (955)
Q Consensus 689 ~~~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~---------H~niv~ 750 (955)
++|. ..+.||+|+||+||+|+. +|+.||||+++.... ..+.+.+|++++++++ |||||+
T Consensus 20 ~~y~--~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 20 EKLQ--RCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHH--TCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccch--heeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 3455 788999999999999997 789999999975421 2367888899888875 888888
Q ss_pred EeEEEE------------------------------cCCeeEEEEeecCCCChhHHh-hcCCCHHHHHHHHHHHHHHHHH
Q 002186 751 LLGFCY------------------------------NRHQAYLLYDYLPNGNLSEKI-RTKRDWAAKYKIVLGVARGLCF 799 (955)
Q Consensus 751 l~g~~~------------------------------~~~~~~lv~ey~~~gsL~~~l-~~~~~~~~~~~i~~~ia~gl~~ 799 (955)
+.+++. +.+..|+|||||++|++.+.+ +...++.+...|+.|++.||+|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence 877643 267899999999999765555 4466899999999999999999
Q ss_pred Hh-cCCCCCcccCCCCCCCeeeCCCC--------------------CceECcccccccccccCCCCcccccccCchhhhh
Q 002186 800 LH-HDCYPAIPHGDLKASNIVFDENM--------------------EPHLAEFGFKYLTQLADGSFPAKIAWTESGEFYN 858 (955)
Q Consensus 800 lH-~~~~~~iiHrdlk~~NiLl~~~~--------------------~~ki~DfGl~~~~~~~~~~~~~~~~~~~~~e~~~ 858 (955)
|| +. +|+||||||+|||++.++ .+||+|||+++..... ...++..|++||+..
T Consensus 177 lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 177 AEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---IVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---EEECCCCTTCSGGGC
T ss_pred HHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---cEEEeecccChhhhc
Confidence 99 88 999999999999999887 8999999999865432 223566688999887
Q ss_pred ccCCcccccchhHHHH-HHHHHhCCCCCCCCCCCCCccccccccccccccccCCCCchHHHHHHHHHHHHHccCCCCCCC
Q 002186 859 AMKEEMYMDVYGFGEI-ILEILTNGRLTNAGSSLQNKPIDGLLGEMYNENEVGSSSSLQDEIKLVLDVALLCTRSTPSDR 937 (955)
Q Consensus 859 ~~~~~~~~DV~S~Gvv-l~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~dp~~R 937 (955)
+.. +.++||||+|++ .+++++|..|+...... ............... ....+.......++.+++.+||+.|
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~dli~~~L~~d---- 323 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWL-HYLTDKMLKQMTFKT-KCNTPAMKQIKRKIQEFHRTMLNFS---- 323 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHH-HHHHHHHHHTCCCSS-CCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcchhhh-hHHHHhhhhhhccCc-ccchhhhhhcCHHHHHHHHHHhccC----
Confidence 665 889999998776 77888888887421000 000000000000010 1111223456678999999999976
Q ss_pred CCHHHHH
Q 002186 938 PSMEEAL 944 (955)
Q Consensus 938 Pt~~ev~ 944 (955)
|++|++
T Consensus 324 -sa~e~l 329 (336)
T 2vuw_A 324 -SATDLL 329 (336)
T ss_dssp -SHHHHH
T ss_pred -CHHHHH
Confidence 999988
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=2.6e-30 Score=289.12 Aligned_cols=284 Identities=20% Similarity=0.218 Sum_probs=198.2
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
..+|.|.|+ |+.... +++ .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++
T Consensus 27 ~~~C~~~~~-c~~~~~----------~l~-~iP~~~----~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~ 90 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSG----------SLN-SIPSGL----TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINT 90 (353)
T ss_dssp CCEECTTSE-EECCST----------TCS-SCCTTC----CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCE
T ss_pred CCCCCCCeE-eeCCCC----------Ccc-cccccc----cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCc
Confidence 457999988 765332 222 344433 3579999999999998877799999999999999999999
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCC-CCcCCCCCCcEEEccCC-CCCCCCchhc
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGN-LLNDQIPAEL 217 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l 217 (955)
..|..|+.+++|++|||++|.+++..+..+.++++|++|+|++|.+++..+ ..|.++++|++|++++| .+.+..|..+
T Consensus 91 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 170 (353)
T 2z80_A 91 IEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF 170 (353)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred cCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHc
Confidence 889999999999999999999997666669999999999999999985444 47899999999999998 4666666778
Q ss_pred cCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCc---CCCc
Q 002186 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFS---RVTT 294 (955)
Q Consensus 218 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~ 294 (955)
..+++|++|++++|.+.+..|..+.++++|++|++++|.+....+..+..+++|++|++++|.+++..+..+. ....
T Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~ 250 (353)
T 2z80_A 171 AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250 (353)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC
T ss_pred cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch
Confidence 8888888888888888777777777778888888887777533223344567777777777777665443322 2334
Q ss_pred cCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcc-cCCCCCCCeeecC
Q 002186 295 LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPEN-LGRNSKLRWVDVS 373 (955)
Q Consensus 295 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~L~~L~ls 373 (955)
++.++|+++.+++. .+. .+|+.+..+++|+.|++++|+++ .+|.. +..+++|++|+++
T Consensus 251 l~~l~L~~~~l~~~-------------------~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~ 309 (353)
T 2z80_A 251 IKKFTFRNVKITDE-------------------SLF-QVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLH 309 (353)
T ss_dssp CCEEEEESCBCCHH-------------------HHH-HHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred hhccccccccccCc-------------------chh-hhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEee
Confidence 44455555444431 000 23444445555555555555555 23333 3455555555555
Q ss_pred CCccccc
Q 002186 374 TNNFNGS 380 (955)
Q Consensus 374 ~N~l~g~ 380 (955)
+|.+.+.
T Consensus 310 ~N~~~~~ 316 (353)
T 2z80_A 310 TNPWDCS 316 (353)
T ss_dssp SSCBCCC
T ss_pred CCCccCc
Confidence 5555543
No 300
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1.5e-33 Score=327.76 Aligned_cols=376 Identities=16% Similarity=0.152 Sum_probs=281.8
Q ss_pred CCCCEEEccCCcCCccCCcc-ccCCCCCcEEeCCCCCCCC----CCchhhcCCCcceEEEecCCCCcccCCCCc-CCCC-
Q 002186 125 TSLISLDISRNNFSGHFPGG-IQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGPIPSQF-GSFK- 197 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~LdL~~N~l~~----~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~-~~l~- 197 (955)
++|++|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 57899999999998654333 7889999999999999885 356778889999999999999976544333 2344
Q ss_pred ---CCcEEEccCCCCCC----CCchhccCCCCCcEEecccccccCCCCcccc-----CCCCCcEEeccCCCCCCCC----
Q 002186 198 ---SLEFLHLAGNLLND----QIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-----NMSEVQYLDIAGANLSGSI---- 261 (955)
Q Consensus 198 ---~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~-----~l~~L~~L~Ls~n~l~~~~---- 261 (955)
+|++|+|++|.++. .+|..+..+++|++|++++|.+.+..+..+. ..++|++|++++|.+++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 79999999999984 5688899999999999999987654333332 3567999999999888643
Q ss_pred CccccCCCCCCEEEeccccccccCCccCc-----CCCccCEEEccCCCCCCC----CCcccCCCCCCcEEecccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFS-----RVTTLKSLDLSDNRLSGP----IPESFADLKNLRLLSLMYNEMSGT 332 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ 332 (955)
+..+..+++|++|++++|.+++..+..+. ..++|++|++++|.++.. ++..+..+++|+.|++++|.+++.
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~ 242 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDV 242 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChH
Confidence 55667788999999999998765443332 356899999999998864 466777888999999999987653
Q ss_pred C-----ccccCCCCCccEEEccCCcCccc----CCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCC
Q 002186 333 V-----PESLVQLPSLEILFIWNNYFSGS----LPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTG 403 (955)
Q Consensus 333 ~-----p~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~ 403 (955)
. +..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+.+..+..+..
T Consensus 243 ~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~---------------- 306 (461)
T 1z7x_W 243 GMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE---------------- 306 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH----------------
T ss_pred HHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH----------------
Confidence 2 22334578889999998888764 5666777888888888888876432211110
Q ss_pred CCCcCccCCCCCcEEECcCCccccc----cchhccCCCCCCEEECCCCcCCCCCCcchhh-----ccCCcccccCCCCCC
Q 002186 404 SLSPSLSNCSSLVRLRLEDNSFSGE----IPLKFSQLPDINYIDLSRNGFTGGIPTDINQ-----ASKLEYFNVSNNPKL 474 (955)
Q Consensus 404 ~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~-----~~~L~~L~ls~N~~l 474 (955)
......++|++|++++|.+++. ++..+..+++|++|++++|++++..+..+.. .++|++|++++| .+
T Consensus 307 ---~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n-~i 382 (461)
T 1z7x_W 307 ---TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADC-DV 382 (461)
T ss_dssp ---HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS-CC
T ss_pred ---HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCC-CC
Confidence 0011246899999999999876 5677888999999999999988655555543 569999999999 66
Q ss_pred CC----CCCcccCCCCccccccCcccccCCC--------CCCCCcCCccceEeccccccc
Q 002186 475 GG----MIPAQTWSLPSLQNFSASACNITGN--------LPPFKSCKSISVIESHMNNLS 522 (955)
Q Consensus 475 ~~----~~p~~~~~l~~L~~l~ls~n~l~~~--------~p~~~~~~~l~~l~l~~N~l~ 522 (955)
.+ .+|..+..+++|+.|++++|.+++. +|. ....++.|++..+.+.
T Consensus 383 ~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~--~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 383 SDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQ--PGCLLEQLVLYDIYWS 440 (461)
T ss_dssp CHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTS--TTCCCCEEECTTCCCC
T ss_pred ChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhcc--CCcchhheeecccccC
Confidence 54 6777777899999999999998753 222 1234555665555544
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.1e-30 Score=280.08 Aligned_cols=254 Identities=20% Similarity=0.268 Sum_probs=172.0
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|.|.+|.|+... ++ .+|..+ .++|++|+|++|.++...+..|.++++|++|+|++|.++.
T Consensus 4 ~C~C~~~~l~c~~~~--l~-----------~ip~~~----~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 66 (306)
T 2z66_A 4 RCSCSGTEIRCNSKG--LT-----------SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSF 66 (306)
T ss_dssp TCEEETTEEECCSSC--CS-----------SCCSCC----CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCE
T ss_pred CCeeCCCEEEcCCCC--cc-----------cCCCCC----CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCc
Confidence 345899999998632 11 123221 3578899999999986555567889999999999998873
Q ss_pred --cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCC-CCcCCCCCCcEEEccCCCCCCCCchh
Q 002186 140 --HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIP-SQFGSFKSLEFLHLAGNLLNDQIPAE 216 (955)
Q Consensus 140 --~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 216 (955)
..|..+..+++|++|||++|.++ .+|..+..+++|++|++++|.+++..+ ..|.++++|++|++++|.+++..|..
T Consensus 67 ~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 145 (306)
T 2z66_A 67 KGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGI 145 (306)
T ss_dssp EEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTT
T ss_pred ccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhh
Confidence 33667777888999999988887 467778888888888888888886554 57888888888888888887777777
Q ss_pred ccCCCCCcEEecccccccC-CCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCcc
Q 002186 217 LGMLKTVTHMEIGYNFYQG-NIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTL 295 (955)
Q Consensus 217 l~~l~~L~~L~l~~n~l~g-~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 295 (955)
+..+++|++|++++|.+.+ .+|..+.++++|++|++++|.+++..|..+..+++|++|++++|++++..+..+..+++|
T Consensus 146 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 225 (306)
T 2z66_A 146 FNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSL 225 (306)
T ss_dssp TTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTC
T ss_pred cccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccC
Confidence 7777777777777776655 355555666666666666666655555555555555555555555555444445555555
Q ss_pred CEEEccCCCCCCCCCcccCCCC-CCcEEecccccCCC
Q 002186 296 KSLDLSDNRLSGPIPESFADLK-NLRLLSLMYNEMSG 331 (955)
Q Consensus 296 ~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~ 331 (955)
++|++++|++++..|..+..++ +|+.|++++|.+++
T Consensus 226 ~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 226 QVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 5555555555555555555542 45555555555543
No 302
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.5e-28 Score=271.14 Aligned_cols=235 Identities=19% Similarity=0.234 Sum_probs=165.8
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
..+++++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4578999999999998 77888888999999999999999 88999999999999999999998 788899999999999
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
+|++|.+.+.+|..+... .++..+.++++|++|++++|.++ .+|..+.++++|++|++++|+++
T Consensus 156 ~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~ 219 (328)
T 4fcg_A 156 SIRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLS 219 (328)
T ss_dssp EEEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCC
T ss_pred ECCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCC
Confidence 999998888888776540 11122344555555555555555 45555555566666666666655
Q ss_pred ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccC
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLG 362 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~ 362 (955)
+ +|..+..+++|++|+|++|++.+.+|..|+.+++|+.|++++|++.+.+|..+..+++|+.|++++|++.+.+|+.++
T Consensus 220 ~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~ 298 (328)
T 4fcg_A 220 A-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIA 298 (328)
T ss_dssp C-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGG
T ss_pred c-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHh
Confidence 4 333455566666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCCCCeeecCCCcc
Q 002186 363 RNSKLRWVDVSTNNF 377 (955)
Q Consensus 363 ~~~~L~~L~ls~N~l 377 (955)
.+++|+.+++..|.+
T Consensus 299 ~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 299 QLPANCIILVPPHLQ 313 (328)
T ss_dssp GSCTTCEEECCGGGS
T ss_pred hccCceEEeCCHHHH
Confidence 666666666655544
No 303
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.3e-29 Score=279.14 Aligned_cols=274 Identities=22% Similarity=0.190 Sum_probs=189.5
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l 185 (955)
.|+++|.++ .+|..+. ++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+
T Consensus 36 c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 112 (353)
T 2z80_A 36 CKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYL 112 (353)
T ss_dssp EECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred eeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcC
Confidence 567788887 5666555 4888888888888877666788888888888888888877777788888888888888888
Q ss_pred cccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
++..+..|+++++|++|+|++|++++..+ ..+..+++|++|++++|. .+.+..+..
T Consensus 113 ~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~-----------------------~~~~~~~~~ 169 (353)
T 2z80_A 113 SNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD-----------------------TFTKIQRKD 169 (353)
T ss_dssp SSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS-----------------------SCCEECTTT
T ss_pred CcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc-----------------------cccccCHHH
Confidence 76555557788888888888887764322 245555555555555542 233333444
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCcccc---CCCC
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESL---VQLP 341 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---~~l~ 341 (955)
+.++++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..+ ...+
T Consensus 170 ~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~ 249 (353)
T 2z80_A 170 FAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNS 249 (353)
T ss_dssp TTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCC
T ss_pred ccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccc
Confidence 5555555555555555555555556666666666666666543322233445666666666666665443332 2356
Q ss_pred CccEEEccCCcCcc----cCCcccCCCCCCCeeecCCCcccccCCCCC-CCCCccceeeccCCCCCCCCC
Q 002186 342 SLEILFIWNNYFSG----SLPENLGRNSKLRWVDVSTNNFNGSIPPDI-CSGGVLFKLILFSNNFTGSLS 406 (955)
Q Consensus 342 ~L~~L~L~~N~l~~----~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~-~~~~~l~~l~l~~n~l~~~~p 406 (955)
.++.++++++.+++ .+|..+..+++|+.|++++|+++ .+|..+ ..+.+|+.+++++|.+.+..|
T Consensus 250 ~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 250 LIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 67888888888876 47788899999999999999998 788775 678999999999999987654
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.4e-29 Score=271.45 Aligned_cols=248 Identities=21% Similarity=0.263 Sum_probs=169.4
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCC--CCchhhcCCCcceEEEec
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~--~~p~~~~~L~~L~~L~Ls 181 (955)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|.++. ..|..+..+++|++|+|+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 35777888887 5565554 689999999999986655668999999999999999883 346778889999999999
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC-
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG- 259 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~- 259 (955)
+|.++ .+|..|..+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+..|..+.++++|++|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 165 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN 165 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc
Confidence 99988 467778889999999999998876544 456666666666666666666556556666666666666666654
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
.+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..|..+..
T Consensus 166 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 245 (306)
T 2z66_A 166 FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 245 (306)
T ss_dssp EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCC
T ss_pred cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHh
Confidence 34555555666666666666665555555555555666666666555554445555555555555555555555555555
Q ss_pred CC-CccEEEccCCcCcc
Q 002186 340 LP-SLEILFIWNNYFSG 355 (955)
Q Consensus 340 l~-~L~~L~L~~N~l~~ 355 (955)
++ +|++|++++|.+++
T Consensus 246 ~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 246 FPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CCTTCCEEECTTCCEEC
T ss_pred hhccCCEEEccCCCeec
Confidence 53 55555555555543
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=3.8e-31 Score=317.77 Aligned_cols=401 Identities=15% Similarity=0.097 Sum_probs=198.7
Q ss_pred CCCCCCEEEccCCcCCccCCccccCC--CCCcEEeCCCCC-CCC-CCchhhcCCCcceEEEecCCCCccc----CCCCcC
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSL--RNLLVLDAFSNS-FSG-SVPAEISQLEHLKVLNLAGSYFSGP----IPSQFG 194 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~LdL~~N~-l~~-~~p~~~~~L~~L~~L~Ls~n~l~~~----~p~~~~ 194 (955)
.+++|++|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 44555555555555544433333332 225555555443 110 0111122445555555555544332 122233
Q ss_pred CCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEE
Q 002186 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESL 274 (955)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 274 (955)
++++|++|++++|.+++.-+ +.++..+.++++|++|++++|.+.+ +|..+.++++|++|
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~--------------------~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L 248 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISP--------------------KDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEF 248 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCH--------------------HHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEE
T ss_pred cCCCccEEEeeccCCCccCH--------------------HHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhh
Confidence 44445555555544431111 1222233444555555555555543 44445555555555
Q ss_pred Eecccccc---ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCc-cccCCCCCccEEEccC
Q 002186 275 FLFRNQLA---GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP-ESLVQLPSLEILFIWN 350 (955)
Q Consensus 275 ~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~ 350 (955)
+++.+... +..+..+..+++|+.|+++++.. +.+|..+..+++|+.|++++|.+++... ..+..+++|+.|++++
T Consensus 249 ~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~ 327 (592)
T 3ogk_B 249 CGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRN 327 (592)
T ss_dssp EECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEG
T ss_pred cccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccC
Confidence 55432211 12223455556666666665432 3456666666777777777766543322 3346667777777763
Q ss_pred CcCcccCCcccCCCCCCCeeecCC-----------CcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 351 NYFSGSLPENLGRNSKLRWVDVST-----------NNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 351 N~l~~~~p~~~~~~~~L~~L~ls~-----------N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+...+.++.....+++|+.|++++ |.+++. .++.....+++|++|+
T Consensus 328 ~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~-----------------------~~~~l~~~~~~L~~L~ 384 (592)
T 3ogk_B 328 VIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQR-----------------------GLIALAQGCQELEYMA 384 (592)
T ss_dssp GGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHH-----------------------HHHHHHHHCTTCSEEE
T ss_pred ccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHH-----------------------HHHHHHhhCccCeEEE
Confidence 322223333334556677777762 222211 0111123477888888
Q ss_pred CcCCccccccchhccC-CCCCCEEECC----CCcCCCC-----CCcchhhccCCcccccCCCCC-CCCCCCcccCCCCcc
Q 002186 420 LEDNSFSGEIPLKFSQ-LPDINYIDLS----RNGFTGG-----IPTDINQASKLEYFNVSNNPK-LGGMIPAQTWSLPSL 488 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----ip~~~~~~~~L~~L~ls~N~~-l~~~~p~~~~~l~~L 488 (955)
++.|++++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|++|++++|.. +.+..+..+.
T Consensus 385 l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~----- 459 (592)
T 3ogk_B 385 VYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIG----- 459 (592)
T ss_dssp EEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHH-----
T ss_pred eecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHH-----
Confidence 8888888777666665 7888888885 6666653 223355566777777764311 1111000000
Q ss_pred ccccCcccccCCCCCCCCcCCccceEecccccccc-ccCCCCCcccccceeeecccccccc-chhhhcCCCCCcEEECCC
Q 002186 489 QNFSASACNITGNLPPFKSCKSISVIESHMNNLSG-TIPESVSNCVELERIDLANNKLIGS-IPEVLARLPVLGVLDLSH 566 (955)
Q Consensus 489 ~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~ 566 (955)
..+++|+.|+++.|.+++ .++..+.++++|+.|+|++|++++. ++..+..+++|++|+|++
T Consensus 460 -----------------~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~ 522 (592)
T 3ogk_B 460 -----------------QYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQG 522 (592)
T ss_dssp -----------------HSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEES
T ss_pred -----------------HhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcC
Confidence 113345555555555543 2333345566677777777766544 334445566677777777
Q ss_pred CCCccccCCCc-CCCCCCcEEECCC
Q 002186 567 NSLSGQIPAKF-GSCSSLTVLNVSF 590 (955)
Q Consensus 567 N~l~~~~p~~~-~~l~~L~~L~ls~ 590 (955)
|+++..--..+ ..++.+....+..
T Consensus 523 n~it~~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 523 YRASMTGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp CBCCTTCTTGGGGCCTTEEEEEECC
T ss_pred CcCCHHHHHHHHHhCCCcEEEEecC
Confidence 76664422222 2344444444433
No 306
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.2e-27 Score=273.16 Aligned_cols=228 Identities=22% Similarity=0.219 Sum_probs=168.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
++++.|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 57899999999999988999999999999999999999888889999999999999999999777777889999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCch-hccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPA-ELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.++...+..|.++++|++|+|++|...+.+|. .+..+++|++|+ +++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~------------------------L~~n~l~~ 210 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLN------------------------LGMCNIKD 210 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEE------------------------CTTSCCSS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEE------------------------CCCCcccc
Confidence 99999877777889999999999988544333332 344455555554 45554443
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
. | .+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..+..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 2 2 3555566666666666666666666666666666666666666666666666666666666666666655566666
Q ss_pred CCCccEEEccCCcCc
Q 002186 340 LPSLEILFIWNNYFS 354 (955)
Q Consensus 340 l~~L~~L~L~~N~l~ 354 (955)
+++|+.|++++|.+.
T Consensus 289 l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 289 LRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEccCCCcC
Confidence 677777777777654
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=3.6e-27 Score=272.77 Aligned_cols=235 Identities=21% Similarity=0.199 Sum_probs=200.7
Q ss_pred CCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCC
Q 002186 117 FPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSF 196 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l 196 (955)
+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 146 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYL 146 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSC
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhccc
Confidence 454443 689999999999999889999999999999999999998888889999999999999999987777778899
Q ss_pred CCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC-CccccCCCCCCEEE
Q 002186 197 KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI-PKELSNLTKLESLF 275 (955)
Q Consensus 197 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L~ 275 (955)
++|++|+|++|.+++..+..+..+ ++|++|++++|+..+.+ +..+.++++|++|+
T Consensus 147 ~~L~~L~L~~N~l~~~~~~~~~~l------------------------~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~ 202 (452)
T 3zyi_A 147 SKLRELWLRNNPIESIPSYAFNRV------------------------PSLMRLDLGELKKLEYISEGAFEGLFNLKYLN 202 (452)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTC------------------------TTCCEEECCCCTTCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCcceeCHhHHhcC------------------------CcccEEeCCCCCCccccChhhccCCCCCCEEE
Confidence 999999999998875444445444 45555555553322233 34588899999999
Q ss_pred eccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 276 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
|++|++++. | .+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..|..+..+++|+.|+|++|++++
T Consensus 203 L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 203 LGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp CTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 999999965 4 58899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCcccCCCCCCCeeecCCCcccc
Q 002186 356 SLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 356 ~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
..+..+..+++|+.|++++|.+.-
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cChHHhccccCCCEEEccCCCcCC
Confidence 888889999999999999998873
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=5.6e-27 Score=270.15 Aligned_cols=228 Identities=25% Similarity=0.268 Sum_probs=171.4
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 57889999999999888889999999999999999999888888999999999999999998776778889999999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.++...+..|.++++|++|+|++|...+.++ ..+..+++ |++|++++|+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~------------------------L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSN------------------------LRYLNLAMCNLRE 199 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSS------------------------CCEEECTTSCCSS
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccc------------------------cCeecCCCCcCcc
Confidence 9999987777788889999999998854433333 24444444 4555555555442
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+| .+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 23 2556666666777767666666666667777777777777777666666777777777777777777666666677
Q ss_pred CCCccEEEccCCcCc
Q 002186 340 LPSLEILFIWNNYFS 354 (955)
Q Consensus 340 l~~L~~L~L~~N~l~ 354 (955)
+++|+.|++++|.+.
T Consensus 278 l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 278 LHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEcCCCCcc
Confidence 777777777777664
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1e-27 Score=259.54 Aligned_cols=208 Identities=23% Similarity=0.240 Sum_probs=137.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-CCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-l~~~~p~~~~~L~~L~~L 178 (955)
.++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|++++|. ++...|..+.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3467778888887777766777777777777777777777777777777777777777776 665556667777777777
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~ 258 (955)
+|++|.+++..|..|.++++|++|++++|.+++..+..++ ++++|++|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~l~~L~~L~l~~n~l~ 166 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFR------------------------DLGNLTHLFLHGNRIS 166 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT------------------------TCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhc------------------------cCCCccEEECCCCccc
Confidence 7777777766666677777777777777766654433344 4444555555555555
Q ss_pred CCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
+..+..+..+++|++|++++|.+++..|..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+..
T Consensus 167 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred ccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 4444445556666666666666666656666666666666666666666555556666666666666666554
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=4e-29 Score=274.10 Aligned_cols=243 Identities=19% Similarity=0.237 Sum_probs=125.4
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcC-CccCCcccc-------CCCCCcEEeCCCCCCCCCCchhh--cCC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNF-SGHFPGGIQ-------SLRNLLVLDAFSNSFSGSVPAEI--SQL 172 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~LdL~~N~l~~~~p~~~--~~L 172 (955)
|+.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. .+++|++|+|++|.+++.+|..+ ..+
T Consensus 45 L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 120 (312)
T 1wwl_A 45 LEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATG 120 (312)
T ss_dssp CTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCS
T ss_pred ceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcC
Confidence 44444444444 344433322 44444444444 223333333 34444444444444444444443 444
Q ss_pred CcceEEEecCCCCcccCCCCcCCC-----CCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCC--CCccc--cC
Q 002186 173 EHLKVLNLAGSYFSGPIPSQFGSF-----KSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGN--IPWQL--GN 243 (955)
Q Consensus 173 ~~L~~L~Ls~n~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~--~p~~~--~~ 243 (955)
++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.+++|++|++++|.+.+. +|..+ ++
T Consensus 121 ~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 199 (312)
T 1wwl_A 121 PDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK 199 (312)
T ss_dssp CCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS
T ss_pred CCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc
Confidence 4444444444444443 4444433 4444444444444444444444444555555544444433 12222 45
Q ss_pred CCCCcEEeccCCCCCC--CCC-ccccCCCCCCEEEeccccccccCC-ccCcCCCccCEEEccCCCCCCCCCcccCCCCCC
Q 002186 244 MSEVQYLDIAGANLSG--SIP-KELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL 319 (955)
Q Consensus 244 l~~L~~L~Ls~n~l~~--~~p-~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 319 (955)
+++|++|++++|.+++ .++ ..+.++++|++|++++|++++..| ..+..+++|++|+|++|+++ .+|..+. ++|
T Consensus 200 l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L 276 (312)
T 1wwl_A 200 FPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKL 276 (312)
T ss_dssp CTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEE
T ss_pred CCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCc
Confidence 5566666666666552 111 223455666666666666666553 33455666667777777666 4555554 667
Q ss_pred cEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 320 RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 320 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
+.|++++|++++. |. +..+++|++|++++|.+++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 7777777777654 44 6667777777777776654
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=7.2e-27 Score=269.27 Aligned_cols=236 Identities=21% Similarity=0.218 Sum_probs=202.0
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
.+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|..
T Consensus 57 ~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 134 (440)
T 3zyj_A 57 EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVY 134 (440)
T ss_dssp SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCS
T ss_pred cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhc
Confidence 4565554 68999999999999988899999999999999999999888888999999999999999998777778899
Q ss_pred CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC-CccccCCCCCCEE
Q 002186 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI-PKELSNLTKLESL 274 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~-p~~l~~l~~L~~L 274 (955)
+++|++|+|++|.+++..+..+.. +++|++|++++|+..+.+ +..|.++++|++|
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~------------------------l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L 190 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNR------------------------IPSLRRLDLGELKRLSYISEGAFEGLSNLRYL 190 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTT------------------------CTTCCEEECCCCTTCCEECTTTTTTCSSCCEE
T ss_pred cccCceeeCCCCcccccCHHHhhh------------------------CcccCEeCCCCCCCcceeCcchhhcccccCee
Confidence 999999999999887544444444 455555555553332233 3468889999999
Q ss_pred EeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc
Q 002186 275 FLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354 (955)
Q Consensus 275 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 354 (955)
++++|+++.. | .+..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+..|..+++|+.|+|++|+++
T Consensus 191 ~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 268 (440)
T 3zyj_A 191 NLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLT 268 (440)
T ss_dssp ECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCC
T ss_pred cCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCC
Confidence 9999999854 4 5889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccCCCCCCCeeecCCCcccc
Q 002186 355 GSLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 355 ~~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
+..+..+..+++|+.|++++|.+.-
T Consensus 269 ~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 269 LLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred ccChhHhccccCCCEEEcCCCCccC
Confidence 8888889999999999999999863
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.4e-29 Score=272.44 Aligned_cols=250 Identities=19% Similarity=0.161 Sum_probs=196.7
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCC-CCCCchhhc-------CCCcceEEEecCCCCcccCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSF-SGSVPAEIS-------QLEHLKVLNLAGSYFSGPIPS 191 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l-~~~~p~~~~-------~L~~L~~L~Ls~n~l~~~~p~ 191 (955)
.++..++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|.
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 356778999999999999 778776655 99999999999 456787776 899999999999999999998
Q ss_pred Cc--CCCCCCcEEEccCCCCCCCCchhccCC-----CCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC--CC
Q 002186 192 QF--GSFKSLEFLHLAGNLLNDQIPAELGML-----KTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS--IP 262 (955)
Q Consensus 192 ~~--~~l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~--~p 262 (955)
.+ +.+++|++|+|++|++++. |..++.+ ++|++|++++|.+.+..|..++++++|++|++++|.+.+. .|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 86 8999999999999999987 8887776 8888888888888877778888888888888888887764 23
Q ss_pred ccc--cCCCCCCEEEecccccccc---CCccCcCCCccCEEEccCCCCCCCCC-cccCCCCCCcEEecccccCCCCCccc
Q 002186 263 KEL--SNLTKLESLFLFRNQLAGQ---VPWEFSRVTTLKSLDLSDNRLSGPIP-ESFADLKNLRLLSLMYNEMSGTVPES 336 (955)
Q Consensus 263 ~~l--~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~ 336 (955)
..+ ..+++|++|++++|++++. ....+..+++|++|+|++|++++.+| ..+..+++|+.|++++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 344 7778888888888887731 12334566788888888888887664 45566778888888888877 56666
Q ss_pred cCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccc
Q 002186 337 LVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 337 l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
+. ++|++|++++|++++. |. +..+++|++|++++|.+++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 65 6778888888877765 54 7777777777777777664
No 313
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1e-30 Score=313.96 Aligned_cols=278 Identities=13% Similarity=0.067 Sum_probs=201.8
Q ss_pred CCCCcEEECCCCcCcccCCccccCC--CCCCEEEccCCc-CCc-cCCccccCCCCCcEEeCCCCCCCCC----CchhhcC
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNN-FSG-HFPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQ 171 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~LdL~~N~l~~~----~p~~~~~ 171 (955)
++.|++|+|++|.+++..+..+..+ .+|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+.+
T Consensus 111 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~ 190 (592)
T 3ogk_B 111 LRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQH 190 (592)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHH
T ss_pred CCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhc
Confidence 7899999999999988777777664 459999999987 221 1223335789999999999998766 4445678
Q ss_pred CCcceEEEecCCCCc----ccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc---CCCCccccCC
Q 002186 172 LEHLKVLNLAGSYFS----GPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ---GNIPWQLGNM 244 (955)
Q Consensus 172 L~~L~~L~Ls~n~l~----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~---g~~p~~~~~l 244 (955)
+++|++|+|++|.++ +.++..+.++++|++|+|++|.+.+ +|..+..+++|++|+++..... +..+..+..+
T Consensus 191 ~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~ 269 (592)
T 3ogk_B 191 NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFP 269 (592)
T ss_dssp CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCC
T ss_pred CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcc
Confidence 999999999999997 3455567789999999999999876 7888999999999999863322 3344567778
Q ss_pred CCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCC-ccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 245 SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVP-WEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 245 ~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
++|+.|+++++. .+.+|..+..+++|++|++++|.+++... ..+..+++|++|+++++-..+.++..+..+++|+.|+
T Consensus 270 ~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~ 348 (592)
T 3ogk_B 270 RKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLR 348 (592)
T ss_dssp TTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEE
T ss_pred ccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEE
Confidence 888888888753 34577777788888888888888765433 2356788888888883322222333445678888888
Q ss_pred ccc-----------ccCCCC-CccccCCCCCccEEEccCCcCcccCCcccCC-CCCCCeeecC----CCcccc
Q 002186 324 LMY-----------NEMSGT-VPESLVQLPSLEILFIWNNYFSGSLPENLGR-NSKLRWVDVS----TNNFNG 379 (955)
Q Consensus 324 Ls~-----------N~l~~~-~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-~~~L~~L~ls----~N~l~g 379 (955)
+++ |.+++. ++.....+++|++|+++.|.+++..+..++. +++|+.|+++ .|.+++
T Consensus 349 L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 349 IERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp EECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred eecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 883 455432 2222345778888888888887766655554 7778888885 455553
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=6.3e-27 Score=253.27 Aligned_cols=226 Identities=25% Similarity=0.311 Sum_probs=173.3
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
+.++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+.++++|++|+|++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 57788888877 445443 467888888888887776677777777777777777777666777777777777777777
Q ss_pred C-CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 184 Y-FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 184 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
. +....|..|.++++|++|++++|.+++.. |..+.++++|++|++++|.+++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------------------------~~~~~~l~~L~~L~l~~n~l~~~~~ 146 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELG------------------------PGLFRGLAALQYLYLQDNALQALPD 146 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCC------------------------TTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEEC------------------------HhHhhCCcCCCEEECCCCcccccCH
Confidence 6 55555666777777777777777665443 3445566677777777777776666
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPS 342 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~ 342 (955)
..+..+++|++|++++|++++..+..|..+++|++|++++|++++..|..|..+++|+.|++++|++++..+..+..+++
T Consensus 147 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 226 (285)
T 1ozn_A 147 DTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTT
T ss_pred hHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcc
Confidence 67888899999999999998877777888899999999999998888888888888999999888888777777888888
Q ss_pred ccEEEccCCcCccc
Q 002186 343 LEILFIWNNYFSGS 356 (955)
Q Consensus 343 L~~L~L~~N~l~~~ 356 (955)
|+.|++++|.+...
T Consensus 227 L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 227 LQYLRLNDNPWVCD 240 (285)
T ss_dssp CCEEECCSSCEECS
T ss_pred cCEEeccCCCccCC
Confidence 88888888887643
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-28 Score=270.71 Aligned_cols=267 Identities=22% Similarity=0.214 Sum_probs=181.0
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~ 89 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNN 89 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCS
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcC
Confidence 4556666666665555555566677777777777777666677777777777777777765443 67777777777777
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.+++.. ..++|++|++++|.+++..+.. +++|++|++++|.+++..|..++.+++|++|++++|.+++..+
T Consensus 90 n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 90 NYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp SEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred Ccccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 7776432 2367777777777776544432 4567777777777766666666777777777777777776666
Q ss_pred ccc-cCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 263 KEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 263 ~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
..+ ..+++|++|++++|.+++..+ ...+++|++|+|++|++++. |..|..+++|+.|++++|+++ .+|..+..++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~ 237 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQ 237 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCC
Confidence 555 356777777777777776522 23467777777777777754 444777777777777777777 4566677777
Q ss_pred CccEEEccCCcCc-ccCCcccCCCCCCCeeecC-CCcccccCCC
Q 002186 342 SLEILFIWNNYFS-GSLPENLGRNSKLRWVDVS-TNNFNGSIPP 383 (955)
Q Consensus 342 ~L~~L~L~~N~l~-~~~p~~~~~~~~L~~L~ls-~N~l~g~ip~ 383 (955)
+|+.|++++|.+. +.+|..+..+++|+.++++ .+.+.|..|.
T Consensus 238 ~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~ 281 (317)
T 3o53_A 238 NLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEE 281 (317)
T ss_dssp TCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSC
T ss_pred CCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchh
Confidence 7777777777777 6666777777777777776 3345554443
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=2.5e-26 Score=272.46 Aligned_cols=284 Identities=24% Similarity=0.304 Sum_probs=129.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccccceeec------CCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcc
Q 002186 42 FNSLHDWFVPPGVNPAGKIYACSWSGVKCN------KNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSG 115 (955)
Q Consensus 42 ~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~------~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~ 115 (955)
...+++|... .+||.|.|..|. .....++.++++++++. .+|..+ .++|+.|+|++|.|+
T Consensus 9 ~~~w~~W~~~--------~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l----~~~L~~L~L~~N~l~- 74 (622)
T 3g06_A 9 DAVWSAWRRA--------APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCL----PAHITTLVIPDNNLT- 74 (622)
T ss_dssp -CHHHHHHHT--------CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCC----CTTCSEEEECSCCCS-
T ss_pred HHHHHHHHhc--------CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhh----CCCCcEEEecCCCCC-
Confidence 3456678543 568999775321 11112444555555554 444332 134555555555555
Q ss_pred cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 116 QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 116 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
.+|. .+++|++|+|++|++++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|..
T Consensus 75 ~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~--- 139 (622)
T 3g06_A 75 SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL--- 139 (622)
T ss_dssp CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---
T ss_pred CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---
Confidence 2333 34555555555555553 333 44555555555555553 232 34555555555555553 3332
Q ss_pred CCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEE
Q 002186 196 FKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLF 275 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~ 275 (955)
+++|++|+|++|.+++ +|. .+.+|+.|++++|.+++ +| ..+++|+.|++++|.+++ +|.. +++|+.|+
T Consensus 140 l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~ 207 (622)
T 3g06_A 140 PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLW 207 (622)
T ss_dssp CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEE
Confidence 2455555555555543 222 22344455555554443 33 233444455555554443 2221 23444444
Q ss_pred eccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcc
Q 002186 276 LFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSG 355 (955)
Q Consensus 276 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 355 (955)
+++|.++. +|. .+++|+.|+|++|++++ +| ..+++|+.|++++|+++. +|. .+++|+.|++++|+++
T Consensus 208 L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~- 274 (622)
T 3g06_A 208 AYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT- 274 (622)
T ss_dssp CCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-
T ss_pred CcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-
Confidence 44444442 221 12344444444444443 22 223444444444444442 222 2344444444444444
Q ss_pred cCCcccCCCCCCCeeecCCCcccc
Q 002186 356 SLPENLGRNSKLRWVDVSTNNFNG 379 (955)
Q Consensus 356 ~~p~~~~~~~~L~~L~ls~N~l~g 379 (955)
.+|..+..+++|+.|++++|.+++
T Consensus 275 ~lp~~l~~l~~L~~L~L~~N~l~~ 298 (622)
T 3g06_A 275 RLPESLIHLSSETTVNLEGNPLSE 298 (622)
T ss_dssp SCCGGGGGSCTTCEEECCSCCCCH
T ss_pred cCCHHHhhccccCEEEecCCCCCC
Confidence 334444444444444444444443
No 317
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=1.3e-25 Score=240.66 Aligned_cols=215 Identities=22% Similarity=0.252 Sum_probs=94.9
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.++|.|.|+.|+.. ..+ +.++++++.++ .+|..+. ++|++|+|++|++++
T Consensus 2 ~~~C~~~~~~C~c~-~~~--------------------------~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~ 51 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNK--------------------------NSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSS 51 (270)
T ss_dssp CCCBGGGTCSBEEE-TTT--------------------------TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSC
T ss_pred CccCCCCCCCCEeC-CCC--------------------------CEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCe
Confidence 36899999998752 222 33444444444 2333332 345555555555554
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..+..|..+++|++|+|++|.++...+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..+..
T Consensus 52 ~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 131 (270)
T 2o6q_A 52 LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS 131 (270)
T ss_dssp CCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred eCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc
Confidence 44444555555555555555554333333444555555555555555444444455555555555555554433333333
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEE
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLD 299 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 299 (955)
+++|++|++++|.+.+..+..+.++++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|+.|+
T Consensus 132 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (270)
T 2o6q_A 132 LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQ 211 (270)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEE
Confidence 33333333333332222222233333344444444444333333333333344444433333333332333333333333
Q ss_pred ccCCC
Q 002186 300 LSDNR 304 (955)
Q Consensus 300 Ls~N~ 304 (955)
|++|.
T Consensus 212 l~~N~ 216 (270)
T 2o6q_A 212 LQENP 216 (270)
T ss_dssp CCSSC
T ss_pred ecCCC
Confidence 33333
No 318
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.93 E-value=7.9e-28 Score=283.58 Aligned_cols=181 Identities=14% Similarity=0.066 Sum_probs=125.6
Q ss_pred ccCCCCCceEEEe-CCCCcEEEEEEeeccc-----------chHHHHHHHHHHHhcc-CCCCceeEeEEEEcCCeeEEEE
Q 002186 699 AARPQSAAGCKAV-LPTGITVSVKKIEWGA-----------TRIKIVSEFITRIGTV-RHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 699 ~g~g~~g~vy~~~-~~~g~~vAvK~~~~~~-----------~~~~~~~~e~~~l~~l-~H~niv~l~g~~~~~~~~~lv~ 765 (955)
.+.|+.|.+++++ ...|+.||||.+.... ...+++.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 3455555555544 3468899999996531 1245689999999999 6999999999999999999999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCCCC-
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADGSF- 844 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~- 844 (955)
||++||+|.++|........+ +|+.||+.||+|+|+. +||||||||+|||++.++.+||+|||+|+.........
T Consensus 322 Eyv~G~~L~d~i~~~~~l~~~-~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~ 397 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEIDRE-KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPT 397 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCCHH-HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSH
T ss_pred ecCCCCcHHHHHHhCCCCCHH-HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCCcccc
Confidence 999999999999875544433 5899999999999999 99999999999999999999999999998654332221
Q ss_pred -cccccccCchhhhhccCCcccccchhHHHHHHHHHhCCCC
Q 002186 845 -PAKIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884 (955)
Q Consensus 845 -~~~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p 884 (955)
..+++.|++||...+ .+..++|+||.|++++++.++..+
T Consensus 398 t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 398 NLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp HHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 225667888898765 456779999999999888776544
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.93 E-value=8.8e-25 Score=259.17 Aligned_cols=269 Identities=23% Similarity=0.341 Sum_probs=173.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..++.|++++|.++ .+|..+. ++|++|+|++|.++. +|. .+++|++|||++|.+++ +|. .+++|++|+|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 35889999999998 6777665 789999999998884 554 57888888888888874 554 6678888888
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS 260 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~ 260 (955)
++|.+++ +|. .+++|++|++++|++++ +|.. ++ +|++|++++|.+++
T Consensus 109 s~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~------------------------~L~~L~Ls~N~l~~- 155 (622)
T 3g06_A 109 FSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PP------------------------GLQELSVSDNQLAS- 155 (622)
T ss_dssp CSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CT------------------------TCCEEECCSSCCSC-
T ss_pred cCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CC------------------------CCCEEECcCCcCCC-
Confidence 8888875 444 56778888888887764 3322 23 44444555554443
Q ss_pred CCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 261 IPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 261 ~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
+|. .+++|+.|++++|++++ +| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++. +|.. +
T Consensus 156 l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~~---~ 220 (622)
T 3g06_A 156 LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---P 220 (622)
T ss_dssp CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCCC---C
T ss_pred cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCCC---C
Confidence 222 12445555555555554 22 234556666666666654 2321 3456666666666552 3321 3
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEEC
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRL 420 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~L 420 (955)
++|+.|++++|.+++ +| ..+++|+.|++++|.++ .+|. .+++|+.|+|
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---------------------------~~~~L~~L~L 268 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---------------------------LPSGLLSLSV 268 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---------------------------CCTTCCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---------------------------ccccCcEEeC
Confidence 556666666666654 33 23355666666666554 2332 3567888888
Q ss_pred cCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhcc
Q 002186 421 EDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQAS 461 (955)
Q Consensus 421 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~ 461 (955)
++|+|+ .+|..+.++++|+.|+|++|.+++.+|..+..++
T Consensus 269 s~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 269 YRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 888888 6677888888888888888888887777666554
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=4.1e-27 Score=273.81 Aligned_cols=234 Identities=24% Similarity=0.235 Sum_probs=124.4
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 205 (955)
+|++|+|++|.+++..|..|+.+++|++|||++|.+++..| +..+++|++|+|++|.+++..+ .++|++|+++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 44444444444444444444444445555554444444333 4444555555555554443221 1455555555
Q ss_pred CCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcccc-CCCCCCEEEecccccccc
Q 002186 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELS-NLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~-~l~~L~~L~L~~N~l~~~ 284 (955)
+|.+++..+. .+++|+.|++++|.+++..|..++++++|++|++++|.+++.+|..+. .+++|++|+|++|.+++.
T Consensus 108 ~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 5555443332 234444444444444444444555555566666666666655555554 556666666666666655
Q ss_pred CCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc-ccCCcccCC
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS-GSLPENLGR 363 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~ 363 (955)
.+ +..+++|+.|+|++|++++.. ..|..+++|+.|++++|.+++ +|..+..+++|+.|++++|.+. +.+|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~-~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCC-HhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 234566666666666666533 336666666666666666664 4555666666666666666665 455555555
Q ss_pred CCCCCeeecC
Q 002186 364 NSKLRWVDVS 373 (955)
Q Consensus 364 ~~~L~~L~ls 373 (955)
++.|+.++++
T Consensus 261 l~~L~~l~~~ 270 (487)
T 3oja_A 261 NQRVQTVAKQ 270 (487)
T ss_dssp CHHHHHHHHH
T ss_pred CCCCcEEecc
Confidence 5555555543
No 321
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.5e-27 Score=260.43 Aligned_cols=268 Identities=19% Similarity=0.227 Sum_probs=158.7
Q ss_pred CcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccc
Q 002186 151 LLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY 230 (955)
Q Consensus 151 L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 230 (955)
++.++++.+.+...++..+..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..| +..+++
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~-------- 81 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLST-------- 81 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTT--------
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCC--------
Confidence 3445556555543333444455566666666666665555566666666666666666654332 444444
Q ss_pred ccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCC
Q 002186 231 NFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIP 310 (955)
Q Consensus 231 n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 310 (955)
|++|++++|.+++. ...++|++|++++|++++..+.. +++|++|++++|++++..+
T Consensus 82 ----------------L~~L~Ls~n~l~~l-----~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 82 ----------------LRTLDLNNNYVQEL-----LVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp ----------------CCEEECCSSEEEEE-----EECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGG
T ss_pred ----------------CCEEECcCCccccc-----cCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccc
Confidence 44444444444321 12245556666666555543322 3456666666666666555
Q ss_pred cccCCCCCCcEEecccccCCCCCcccc-CCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCC
Q 002186 311 ESFADLKNLRLLSLMYNEMSGTVPESL-VQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGG 389 (955)
Q Consensus 311 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~ 389 (955)
..++.+++|+.|++++|.+++..+..+ ..+++|++|++++|.+++. |. ...+++|+.|++++|.+++ +
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-l-------- 206 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-M-------- 206 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-E--------
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCc-c--------
Confidence 566666666666666666665544444 2456666666666666544 21 2235556666666665542 1
Q ss_pred ccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCCCCEEECCCCcCC-CCCCcchhhccCCccccc
Q 002186 390 VLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPDINYIDLSRNGFT-GGIPTDINQASKLEYFNV 468 (955)
Q Consensus 390 ~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ip~~~~~~~~L~~L~l 468 (955)
|+.+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|.+. +.+|..+..+++|+.+++
T Consensus 207 ----------------~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l 269 (317)
T 3o53_A 207 ----------------GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (317)
T ss_dssp ----------------CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHH
T ss_pred ----------------hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEEC
Confidence 223556777888888888887 46777778888888888888887 666777777778888888
Q ss_pred CCCCCCCCCCCc
Q 002186 469 SNNPKLGGMIPA 480 (955)
Q Consensus 469 s~N~~l~~~~p~ 480 (955)
++|..+.|..|.
T Consensus 270 ~~~~~l~~~~~~ 281 (317)
T 3o53_A 270 QTVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHHSSSSC
T ss_pred CCchhccCCchh
Confidence 766555554443
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=9.8e-27 Score=270.61 Aligned_cols=236 Identities=20% Similarity=0.162 Sum_probs=212.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
.++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| |+.+++|++|||++|.+++.. ..++|++|+
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-----~~~~L~~L~ 105 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLH 105 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE-----ECTTCCEEE
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC-----CCCCcCEEE
Confidence 3479999999999999888999999999999999999998766 999999999999999998633 338999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCcccc-CCCCCcEEeccCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLG-NMSEVQYLDIAGANLS 258 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~L~Ls~n~l~ 258 (955)
|++|.+++..+. .+++|++|+|++|.+++..|..++.+++|+.|++++|.+++..|..+. ++++|++|++++|.++
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 999999987665 458899999999999999999999999999999999999998888876 8999999999999999
Q ss_pred CCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC-CCCcccc
Q 002186 259 GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS-GTVPESL 337 (955)
Q Consensus 259 ~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~l 337 (955)
+.. .+..+++|++|+|++|.+++..| .+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+. +.+|..+
T Consensus 183 ~~~--~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 183 DVK--GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp EEE--CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred ccc--ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 763 34469999999999999998655 58999999999999999996 7888999999999999999998 7788889
Q ss_pred CCCCCccEEEcc
Q 002186 338 VQLPSLEILFIW 349 (955)
Q Consensus 338 ~~l~~L~~L~L~ 349 (955)
..++.|+.++++
T Consensus 259 ~~l~~L~~l~~~ 270 (487)
T 3oja_A 259 SKNQRVQTVAKQ 270 (487)
T ss_dssp TTCHHHHHHHHH
T ss_pred HhCCCCcEEecc
Confidence 999999888876
No 323
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.5e-24 Score=233.30 Aligned_cols=206 Identities=25% Similarity=0.276 Sum_probs=139.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..+.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 35788888888888777777888888888888888888777777888888888888888887776677777788888888
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCC-CchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
++|.+++..+..|+++++|++|++++|.+++. +|..+. ++++|++|++++|.+++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~------------------------~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFS------------------------NLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGG------------------------GCTTCCEEECCSSCCCE
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhc------------------------cCCCCCEEECCCCCCCc
Confidence 87777766666677777777777777777542 344444 44444455555555544
Q ss_pred CCCccccCCCCCC----EEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 260 SIPKELSNLTKLE----SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 260 ~~p~~l~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
..+..+..+++|+ +|++++|.+++..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 4444444444444 5666666666555444433 356677777777666555556666666666666666654
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1e-24 Score=234.66 Aligned_cols=209 Identities=23% Similarity=0.243 Sum_probs=162.9
Q ss_pred cEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEe
Q 002186 76 IVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLD 155 (955)
Q Consensus 76 ~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 155 (955)
.+..++++++.+.+..+..+.. +++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|..+++|++|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~--l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFS--FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTT--CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CccEEECCCCcccccCHhHhcc--ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 4788999999998766656665 88999999999999988888999999999999999999999889999999999999
Q ss_pred CCCCCCCCCCchhhcCCCcceEEEecCCCCccc-CCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccccc
Q 002186 156 AFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 156 L~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
+++|.+++..+..+.++++|++|+|++|.+++. +|..|+++++|++|+|++|++++..+..+..+++|+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---------- 176 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMP---------- 176 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCT----------
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhcc----------
Confidence 999999987777899999999999999999874 699999999999999999999887777666555554
Q ss_pred CCCCccccCCCCCc-EEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCC
Q 002186 235 GNIPWQLGNMSEVQ-YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGP 308 (955)
Q Consensus 235 g~~p~~~~~l~~L~-~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 308 (955)
.+. .|++++|.+++..+..+. ..+|++|++++|++++..+..|..+++|+.|++++|.+.+.
T Consensus 177 -----------~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 177 -----------LLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp -----------TCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred -----------ccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 111 344444444433332222 23556666666666555444556666666666666666543
No 325
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.8e-24 Score=232.08 Aligned_cols=227 Identities=26% Similarity=0.307 Sum_probs=141.2
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
++..+++..+.+.... .+..+++|++|++++|.+.. + ..++.+++|++|+|++|.+++ + ..+.++++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 4455566666555432 34567777777777777663 2 246777777777777777765 2 366777777777777
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+++..|..|+++++|++|+|++|++++..|..++.++ +|++|++++|.+++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~------------------------~L~~L~L~~n~l~~~~ 149 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLT------------------------NLTYLNLAHNQLQSLP 149 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCT------------------------TCCEEECCSSCCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCC------------------------CCCEEECCCCccCccC
Confidence 7777766666677777777777777777655444444444 4444444444444444
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLP 341 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~ 341 (955)
+..+..+++|++|++++|++++..+..|..+++|++|++++|++++..|..|..+++|+.|++++|.+.+. ++
T Consensus 150 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~ 222 (272)
T 3rfs_A 150 KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CP 222 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TT
T ss_pred HHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------Cc
Confidence 44455555555555555555555555555666666666666666665555566666666666666665533 34
Q ss_pred CccEEEccCCcCcccCCcccCCCC
Q 002186 342 SLEILFIWNNYFSGSLPENLGRNS 365 (955)
Q Consensus 342 ~L~~L~L~~N~l~~~~p~~~~~~~ 365 (955)
+|+.|+++.|.++|.+|.+++.+.
T Consensus 223 ~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 223 GIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp TTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred HHHHHHHHHHhCCCcccCcccccC
Confidence 566677777777777777666544
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.90 E-value=1.1e-23 Score=225.85 Aligned_cols=207 Identities=24% Similarity=0.287 Sum_probs=151.4
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++. + ..+..+++|++|+|++|.+.+. ..+..+++|++|+|++|.+++..+..+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 6789999999999874 3 3588999999999999999873 4799999999999999999988888899999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..|..|+++++|++|+|++|.+++..|..++.+++|+.|++++|.+++..+..++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----------------- 178 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFD----------------- 178 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT-----------------
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhc-----------------
Confidence 999999988888899999999999999999876665566666666655555555544444444
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
.+++|++|++++|++++..+..|..+++|+.|++++|.+.+. +++|+.|+++.|.++|.+|.+++.
T Consensus 179 -------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 179 -------KLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp -------TCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred -------CCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 444555555555555544444445555555555555554432 334556666666666666666555
Q ss_pred CC
Q 002186 340 LP 341 (955)
Q Consensus 340 l~ 341 (955)
++
T Consensus 245 ~~ 246 (272)
T 3rfs_A 245 VA 246 (272)
T ss_dssp BC
T ss_pred cC
Confidence 43
No 327
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=1.1e-22 Score=218.00 Aligned_cols=203 Identities=22% Similarity=0.297 Sum_probs=126.2
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEc
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHL 204 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 204 (955)
.+.+++++++|.++. +|..+. ++|++|+|++|.+++..+..|.++++|++|+|++|.++...+..|.++++|++|+|
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 356788888888874 565554 57888888888888766667888888888888888887665666778888888888
Q ss_pred cCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccccc
Q 002186 205 AGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 205 ~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
++|.+++..+..+..+++|++|++++|.+.+..|..+.++++|++|++++|.+++ .
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~------------------------~ 148 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS------------------------L 148 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC------------------------C
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc------------------------c
Confidence 8888776555555556666666555555554444444555555555555555544 3
Q ss_pred CCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCc
Q 002186 285 VPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFS 354 (955)
Q Consensus 285 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 354 (955)
.+..|..+++|++|+|++|++++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|.+.
T Consensus 149 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 149 PKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 3333444455555555555555444444555555555555555555444444555555555555555543
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=5.4e-23 Score=217.70 Aligned_cols=143 Identities=20% Similarity=0.258 Sum_probs=76.9
Q ss_pred CCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
.||.|.|++|..... .++++++++. .+|..+ .+.++.|+|++|.+++..|..|.++++|++|+|++|.+++.
T Consensus 3 ~Cp~~~gC~C~~~~~---~l~~~~~~l~-~~p~~~----~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 74 (251)
T 3m19_A 3 TCETVTGCTCNEGKK---EVDCQGKSLD-SVPSGI----PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL 74 (251)
T ss_dssp -CHHHHSSEEEGGGT---EEECTTCCCS-SCCSCC----CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC
T ss_pred cCCCCCceEcCCCCe---EEecCCCCcc-ccCCCC----CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc
Confidence 588999999964222 2345555444 233222 13455555555555555555555555555555555555555
Q ss_pred CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
.|..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..+..|.++++|++|+|++|++++
T Consensus 75 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 75 SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 55555555555555555555554444445555555555555555554444444555555555555555543
No 329
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=1.8e-27 Score=285.84 Aligned_cols=433 Identities=16% Similarity=0.127 Sum_probs=215.5
Q ss_pred CCCCcEEECCCCcCcc---cCCc------------cccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCC-CCC
Q 002186 100 FNELVDLNLSHNSFSG---QFPV------------EIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSN-SFS 162 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~---~~p~------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N-~l~ 162 (955)
+++|+.|+|+++.... ..|. .+..+++|++|+|++|.+++..+..+. .+++|++|+|++| .++
T Consensus 65 ~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~ 144 (594)
T 2p1m_B 65 FPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFS 144 (594)
T ss_dssp CTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEE
T ss_pred CCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCC
Confidence 6788889888875321 1221 123577888888888887766665554 5778888888877 443
Q ss_pred CC-CchhhcCCCcceEEEecCCCCcccCCCCc----CCCCCCcEEEccCCC--CCCC-CchhccCCCCCcEEeccccccc
Q 002186 163 GS-VPAEISQLEHLKVLNLAGSYFSGPIPSQF----GSFKSLEFLHLAGNL--LNDQ-IPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 163 ~~-~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~----~~l~~L~~L~L~~N~--l~~~-~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
.. ++..+.++++|++|+|++|.+++..+..+ ..+++|++|++++|. ++.. ++.....+++|++|++++|...
T Consensus 145 ~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~ 224 (594)
T 2p1m_B 145 TDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPL 224 (594)
T ss_dssp HHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCH
T ss_pred HHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcH
Confidence 22 33444577888888888887665443333 356678888887775 2110 1111234566666666666322
Q ss_pred CCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEE-EccCCCCCCCCCccc
Q 002186 235 GNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSL-DLSDNRLSGPIPESF 313 (955)
Q Consensus 235 g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L-~Ls~N~l~~~~p~~~ 313 (955)
+.+|..+.++++|++|+++.+... +..|.+.+. +..+.++++|+.| .+.+... +.++..+
T Consensus 225 ~~l~~~~~~~~~L~~L~l~~~~~~-----------------~~~~~~~~l-~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~ 285 (594)
T 2p1m_B 225 EKLATLLQRAPQLEELGTGGYTAE-----------------VRPDVYSGL-SVALSGCKELRCLSGFWDAVP-AYLPAVY 285 (594)
T ss_dssp HHHHHHHHHCTTCSEEECSBCCCC-----------------CCHHHHHHH-HHHHHTCTTCCEEECCBTCCG-GGGGGGH
T ss_pred HHHHHHHhcCCcceEcccccccCc-----------------cchhhHHHH-HHHHhcCCCcccccCCcccch-hhHHHHH
Confidence 225555556666666665433210 122223322 1234455555555 2222211 1233333
Q ss_pred CCCCCCcEEecccccCCCCC-ccccCCCCCccEEEccCCcCcc-cCCcccCCCCCCCeeecCCCcccccCCCCCCCCCcc
Q 002186 314 ADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFSG-SLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVL 391 (955)
Q Consensus 314 ~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l 391 (955)
..+++|+.|++++|.+++.. +..+..+++|+.|++++| ++. .++.....+++|+.|+++.+.-.|.
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~----------- 353 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVM----------- 353 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCS-----------
T ss_pred HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccccc-----------
Confidence 34556666666666544321 122445666666666665 321 1222222356666666643221000
Q ss_pred ceeeccCCCCCCCCCcCc-cCCCCCcEEECcCCccccccchhcc-CCCCCCEEECC--C----CcCCCCC-----Ccchh
Q 002186 392 FKLILFSNNFTGSLSPSL-SNCSSLVRLRLEDNSFSGEIPLKFS-QLPDINYIDLS--R----NGFTGGI-----PTDIN 458 (955)
Q Consensus 392 ~~l~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~i-----p~~~~ 458 (955)
...+.+++.....+ ..+++|+.|.++.|++++..+..+. .+++|+.|+++ + |.++... +..+.
T Consensus 354 ----~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~ 429 (594)
T 2p1m_B 354 ----EPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVE 429 (594)
T ss_dssp ----SCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHH
T ss_pred ----ccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHh
Confidence 00111111100111 2367788887777777766555554 47788888887 3 4444211 11244
Q ss_pred hccCCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccCCCC-Ccccccce
Q 002186 459 QASKLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIPESV-SNCVELER 537 (955)
Q Consensus 459 ~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p~~~-~~l~~L~~ 537 (955)
.+++|+.|+++++ +.+..+..+.. .+++|+.|++++|.+++..+..+ .++++|+.
T Consensus 430 ~~~~L~~L~L~~~--l~~~~~~~l~~----------------------~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~ 485 (594)
T 2p1m_B 430 HCKDLRRLSLSGL--LTDKVFEYIGT----------------------YAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485 (594)
T ss_dssp HCTTCCEEECCSS--CCHHHHHHHHH----------------------HCTTCCEEEEESCCSSHHHHHHHHHHCTTCCE
T ss_pred hCCCccEEeecCc--ccHHHHHHHHH----------------------hchhccEeeccCCCCcHHHHHHHHhcCCCcCE
Confidence 5667777777552 11111111111 12233444444444333222222 34555666
Q ss_pred eeeccccccccchh-hhcCCCCCcEEECCCCCCccccCCCc-CCCCCCcEEECCCC
Q 002186 538 IDLANNKLIGSIPE-VLARLPVLGVLDLSHNSLSGQIPAKF-GSCSSLTVLNVSFN 591 (955)
Q Consensus 538 L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 591 (955)
|+|++|.+++..+. ....+++|+.|+|++|.++......+ ..++.|+...+..+
T Consensus 486 L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~~~~~~ 541 (594)
T 2p1m_B 486 LEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVEVIDER 541 (594)
T ss_dssp EEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEEEECSS
T ss_pred EECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEEEecCC
Confidence 66666665443332 23345566666666666543322222 23444444444433
No 330
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.90 E-value=7.8e-27 Score=280.32 Aligned_cols=402 Identities=14% Similarity=0.148 Sum_probs=228.7
Q ss_pred CCCCcEEECCCCcCcccCCcccc-CCCCCCEEEccCC-cCCcc-CCccccCCCCCcEEeCCCCCCCCCCchhhc----CC
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRN-NFSGH-FPGGIQSLRNLLVLDAFSNSFSGSVPAEIS----QL 172 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~----~L 172 (955)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 68999999999999887777776 7999999999999 45432 444556899999999999998876655554 67
Q ss_pred CcceEEEecCCC--Ccc-cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccccc-------ccCCCCcccc
Q 002186 173 EHLKVLNLAGSY--FSG-PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNF-------YQGNIPWQLG 242 (955)
Q Consensus 173 ~~L~~L~Ls~n~--l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~-------l~g~~p~~~~ 242 (955)
++|++|+|++|. ++. .++..+.++++|++|+|++|...+.+|..+..+++|++|+++.+. +.+ ++..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHh
Confidence 799999999997 221 112223567999999999994333488889999999999976543 222 334566
Q ss_pred CCCCCcEE-eccCCCCCCCCCccccCCCCCCEEEeccccccccCCc-cCcCCCccCEEEccCCCCCCC-CCcccCCCCCC
Q 002186 243 NMSEVQYL-DIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPW-EFSRVTTLKSLDLSDNRLSGP-IPESFADLKNL 319 (955)
Q Consensus 243 ~l~~L~~L-~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L 319 (955)
++++|+.| .+.+... +.++..+..+++|++|++++|.+++.... .+..+++|++|++++| +... ++.....+++|
T Consensus 263 ~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L 340 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDL 340 (594)
T ss_dssp TCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTC
T ss_pred cCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCC
Confidence 77777777 3332221 22333344556677777776665432211 1345566666666655 2211 11112235566
Q ss_pred cEEeccc---------ccCCCCCcccc-CCCCCccEEEccCCcCcccCCcccC-CCCCCCeeecCCCcccccCCCCCCCC
Q 002186 320 RLLSLMY---------NEMSGTVPESL-VQLPSLEILFIWNNYFSGSLPENLG-RNSKLRWVDVSTNNFNGSIPPDICSG 388 (955)
Q Consensus 320 ~~L~Ls~---------N~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~-~~~~L~~L~ls~N~l~g~ip~~~~~~ 388 (955)
+.|+++. +.+++.....+ ..+++|+.|.++.|.+++..+..+. .+++|+.|+++.|...+
T Consensus 341 ~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~--------- 411 (594)
T 2p1m_B 341 RELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKA--------- 411 (594)
T ss_dssp CEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTC---------
T ss_pred CEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCC---------
Confidence 6666532 22222111111 1245555555555555443332222 24445555444111000
Q ss_pred CccceeeccCCCCCC-----CCCcCccCCCCCcEEECcCCccccccchhccC-CCCCCEEECCCCcCCCCCCcch-hhcc
Q 002186 389 GVLFKLILFSNNFTG-----SLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQ-LPDINYIDLSRNGFTGGIPTDI-NQAS 461 (955)
Q Consensus 389 ~~l~~l~l~~n~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~ip~~~-~~~~ 461 (955)
-++++. .++..+..+++|+.|++++ .+++..+..+.. +++|++|+|++|.+++..+..+ ..++
T Consensus 412 ---------~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 481 (594)
T 2p1m_B 412 ---------PDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCD 481 (594)
T ss_dssp ---------CCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCT
T ss_pred ---------cccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCC
Confidence 011110 0011133455566666654 444443333333 5555555555555543222222 2233
Q ss_pred CCcccccCCCCCCCCCCCcccCCCCccccccCcccccCCCCCCCCcCCccceEeccccccccccC-CCCCcccccceeee
Q 002186 462 KLEYFNVSNNPKLGGMIPAQTWSLPSLQNFSASACNITGNLPPFKSCKSISVIESHMNNLSGTIP-ESVSNCVELERIDL 540 (955)
Q Consensus 462 ~L~~L~ls~N~~l~~~~p~~~~~l~~L~~l~ls~n~l~~~~p~~~~~~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~L 540 (955)
+|++|++++| .+++..+ ..+..+++|+.|++
T Consensus 482 ~L~~L~L~~n------------------------------------------------~~~~~~~~~~~~~l~~L~~L~l 513 (594)
T 2p1m_B 482 SLRKLEIRDC------------------------------------------------PFGDKALLANASKLETMRSLWM 513 (594)
T ss_dssp TCCEEEEESC------------------------------------------------SCCHHHHHHTGGGGGGSSEEEE
T ss_pred CcCEEECcCC------------------------------------------------CCcHHHHHHHHHhCCCCCEEee
Confidence 4444444433 3322222 23345788999999
Q ss_pred ccccccccchhhh-cCCCCCcEEECCCCCCcc
Q 002186 541 ANNKLIGSIPEVL-ARLPVLGVLDLSHNSLSG 571 (955)
Q Consensus 541 s~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 571 (955)
++|+++..-...+ ..+|.|+...+..+.-..
T Consensus 514 ~~~~~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 514 SSCSVSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp ESSCCBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred eCCCCCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 9999865544445 567888887777665443
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1.9e-23 Score=228.75 Aligned_cols=223 Identities=20% Similarity=0.179 Sum_probs=135.6
Q ss_pred CCCcEEECCCCcCcccCCc---cccCCCCCCEEEccCCcCCccCCccc--cCCCCCcEEeCCCCCCCCCCc----hhhcC
Q 002186 101 NELVDLNLSHNSFSGQFPV---EIFNLTSLISLDISRNNFSGHFPGGI--QSLRNLLVLDAFSNSFSGSVP----AEISQ 171 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~LdL~~N~l~~~~p----~~~~~ 171 (955)
..++.|++.++.++...-. .+..+++|++|+|++|.+.+..|..+ ..+++|++|+|++|.+++..| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 3567888888776532111 12345779999999999998888887 889999999999999887655 34567
Q ss_pred CCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCC--Cc--hhccCCCCCcEEecccccccCCCCc----cccC
Q 002186 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQ--IP--AELGMLKTVTHMEIGYNFYQGNIPW----QLGN 243 (955)
Q Consensus 172 L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p--~~l~~l~~L~~L~l~~n~l~g~~p~----~~~~ 243 (955)
+++|++|+|++|.+++..|..|+++++|++|+|++|++.+. ++ ..++.+++|++|++++|.++. +|. .+++
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~ 222 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAA 222 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHH
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhc
Confidence 88899999999999888888888899999999999887642 22 122455566666666665531 111 1344
Q ss_pred CCCCcEEeccCCCCCCCCCccccCC---CCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCc
Q 002186 244 MSEVQYLDIAGANLSGSIPKELSNL---TKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLR 320 (955)
Q Consensus 244 l~~L~~L~Ls~n~l~~~~p~~l~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 320 (955)
+++|++||+++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 4555555555555555444444443 34444444444444 2333322 3444444444444432 11 33334444
Q ss_pred EEecccccC
Q 002186 321 LLSLMYNEM 329 (955)
Q Consensus 321 ~L~Ls~N~l 329 (955)
.|++++|++
T Consensus 298 ~L~L~~N~l 306 (310)
T 4glp_A 298 NLTLDGNPF 306 (310)
T ss_dssp CEECSSTTT
T ss_pred EEECcCCCC
Confidence 444444443
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.4e-22 Score=217.18 Aligned_cols=202 Identities=22% Similarity=0.295 Sum_probs=93.6
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCc
Q 002186 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 200 (955)
+.++++|+++++++|.++. +|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 3445555555555555542 333332 4455555555555544445555555555555555555533221 4555555
Q ss_pred EEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccc
Q 002186 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280 (955)
Q Consensus 201 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 280 (955)
+|+|++|.++ .+|..+..+ ++|++|++++|++++..|..|..+++|++|+|++|+
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l------------------------~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTL------------------------PALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTC------------------------TTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCC-cCchhhccC------------------------CCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 5555555554 233333333 333333333333333333334444444444444444
Q ss_pred ccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcC
Q 002186 281 LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYF 353 (955)
Q Consensus 281 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l 353 (955)
+++..+..|..+++|+.|+|++|+++...+..|..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 44433333444444444444444444433334444444555555555444 3444444444555555555544
No 333
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=4.7e-25 Score=244.69 Aligned_cols=214 Identities=16% Similarity=0.205 Sum_probs=123.2
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
..|.+|.++.|+.. .+..++++.+.+.. ..+.....+.++.|++++|.+.+..+. +..+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~~--~~~~l~l~~~~~~~---~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDES--LWQTLDLTGKNLHP---DVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCST--TSSEEECTTCBCCH---HHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCch--hheeeccccccCCH---HHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 34668999988752 34456666655542 112221125667777777777665544 4566777777777776665
Q ss_pred c-CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC-CCccc-CCCCcCCCCCCcEEEccCC-CCCCC-Cc
Q 002186 140 H-FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS-YFSGP-IPSQFGSFKSLEFLHLAGN-LLNDQ-IP 214 (955)
Q Consensus 140 ~-~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p 214 (955)
. +|..+..+++|++|+|++|.+++..|..++++++|++|+|++| .+++. +|..+.++++|++|++++| .+++. ++
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~ 187 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQ 187 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHH
Confidence 4 5666666777777777777666666666666677777777766 45542 4555666666666666666 66543 45
Q ss_pred hhccCCC-CCcEEecccc--ccc-CCCCccccCCCCCcEEeccCCC-CCCCCCccccCCCCCCEEEeccc
Q 002186 215 AELGMLK-TVTHMEIGYN--FYQ-GNIPWQLGNMSEVQYLDIAGAN-LSGSIPKELSNLTKLESLFLFRN 279 (955)
Q Consensus 215 ~~l~~l~-~L~~L~l~~n--~l~-g~~p~~~~~l~~L~~L~Ls~n~-l~~~~p~~l~~l~~L~~L~L~~N 279 (955)
..+..++ +|++|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|++|++++|
T Consensus 188 ~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 188 VAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp HHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred HHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 5555555 5555555555 232 2334444445555555555554 33334444444444444444444
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.8e-22 Score=216.66 Aligned_cols=203 Identities=19% Similarity=0.227 Sum_probs=169.3
Q ss_pred ccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCc
Q 002186 145 IQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVT 224 (955)
Q Consensus 145 ~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 224 (955)
++++++|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++. |
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~---------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-Q---------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-E----------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-c----------
Confidence 566777777777777776 4555543 5677777777777766667777777777777777766532 1
Q ss_pred EEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCC
Q 002186 225 HMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNR 304 (955)
Q Consensus 225 ~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 304 (955)
. .+.+++|++|++++|.++ .+|..+..+++|++|++++|++++..+..|..+++|++|+|++|+
T Consensus 72 --------------~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 72 --------------V-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp --------------C-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred --------------C-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 1 146678888888888887 578888999999999999999999888899999999999999999
Q ss_pred CCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCccc
Q 002186 305 LSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFN 378 (955)
Q Consensus 305 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~ 378 (955)
+++..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|+++ .+|..+....+|+.+++++|.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 99988888999999999999999999777777889999999999999998 68888888899999999999886
No 335
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.88 E-value=1.5e-23 Score=245.80 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=141.1
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---------hHHHHHHHHHHHhccCCCCceeEeEEEEcCCeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------RIKIVSEFITRIGTVRHKNLIRLLGFCYNRHQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------~~~~~~~e~~~l~~l~H~niv~l~g~~~~~~~~~lv~ 765 (955)
..+.||+|+||.||+|.. .++.+|+|+...... ..+.+.+|++++++++|||||++..++...+..|+||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 456899999999999954 578899998643211 1345789999999999999997777777788889999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccccccccCC---
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKYLTQLADG--- 842 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~~~~~~~--- 842 (955)
|||++|+|.++++. +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~ 487 (540)
T 3en9_A 419 SYINGKLAKDVIED------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV 487 (540)
T ss_dssp ECCCSEEHHHHSTT------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH
T ss_pred ECCCCCCHHHHHHH------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc
Confidence 99999999999987 568999999999999999 9999999999999998 999999999986543211
Q ss_pred ------CCcccccccCchhhhhc--cCCcccccchhHHHHHHHHHhCCCCC
Q 002186 843 ------SFPAKIAWTESGEFYNA--MKEEMYMDVYGFGEIILEILTNGRLT 885 (955)
Q Consensus 843 ------~~~~~~~~~~~~e~~~~--~~~~~~~DV~S~Gvvl~Elltg~~p~ 885 (955)
....++++|++||+... ..|+..+|+||..+-.+|.+-++.++
T Consensus 488 ~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 488 DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 11235677888998876 55777889999999888888776554
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.3e-22 Score=213.18 Aligned_cols=197 Identities=18% Similarity=0.191 Sum_probs=136.1
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCc-CCccCCccccCCCCCcEEeCCC-CCCCCCCchhhcCCCcceEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN-FSGHFPGGIQSLRNLLVLDAFS-NSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~LdL~~-N~l~~~~p~~~~~L~~L~~L 178 (955)
..|++|+|++|++++..+..|.++++|++|++++|. +++..+..|..+++|++|++++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 468889999999988777788889999999999996 7777777888888888888888 88887666778888888888
Q ss_pred EecCCCCcccCCCCcCCCCCCc---EEEccCC-CCCCCCchhccCCCCCc-EEecccccccCCCCccccCCCCCcEEecc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLE---FLHLAGN-LLNDQIPAELGMLKTVT-HMEIGYNFYQGNIPWQLGNMSEVQYLDIA 253 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l~~l~~L~-~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls 253 (955)
+|++|.+++ +|. |+.+++|+ +|++++| .+++..+..+..+++|+ .|++++|
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n---------------------- 166 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN---------------------- 166 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC----------------------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC----------------------
Confidence 888888876 665 77777777 8888888 77655444455555555 5555554
Q ss_pred CCCCCCCCCccccCCCCCCEEEecccc-ccccCCccCcCC-CccCEEEccCCCCCCCCCcccCCCCCCcEEecccc
Q 002186 254 GANLSGSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRV-TTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN 327 (955)
Q Consensus 254 ~n~l~~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 327 (955)
.++ .+|......++|++|++++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 167 --~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 167 --GFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp --CCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred --CCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 444 222222222556666666663 555555556666 6666666666666643 322 4556666666544
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=3e-24 Score=240.53 Aligned_cols=226 Identities=23% Similarity=0.235 Sum_probs=144.8
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCC----ccccCCC-CCcEEeCCCCCCCCCCchhhcCC-----Cc
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLR-NLLVLDAFSNSFSGSVPAEISQL-----EH 174 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~LdL~~N~l~~~~p~~~~~L-----~~ 174 (955)
.++|++|.++|.+|..+...++|++|||++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35788888888888777777778888888888887666 6777787 88888888888887777777664 88
Q ss_pred ceEEEecCCCCcccCCCCc----CCC-CCCcEEEccCCCCCCCCchhcc----C-CCCCcEEecccccccCCC----Ccc
Q 002186 175 LKVLNLAGSYFSGPIPSQF----GSF-KSLEFLHLAGNLLNDQIPAELG----M-LKTVTHMEIGYNFYQGNI----PWQ 240 (955)
Q Consensus 175 L~~L~Ls~n~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~l~----~-l~~L~~L~l~~n~l~g~~----p~~ 240 (955)
|++|+|++|.+++..+..+ ..+ ++|++|+|++|.+++..+..+. . .++|++|++++|.+.... +..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 8888888888876665543 334 7888888888888766655443 2 246777777777666432 223
Q ss_pred ccCCC-CCcEEeccCCCCCCCCCcccc----CC-CCCCEEEecccccccc----CCccCcC-CCccCEEEccCCCCCCCC
Q 002186 241 LGNMS-EVQYLDIAGANLSGSIPKELS----NL-TKLESLFLFRNQLAGQ----VPWEFSR-VTTLKSLDLSDNRLSGPI 309 (955)
Q Consensus 241 ~~~l~-~L~~L~Ls~n~l~~~~p~~l~----~l-~~L~~L~L~~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 309 (955)
+..++ +|++|++++|.+++..+..+. .. ++|++|+|++|.+++. ++..+.. .++|++|+|++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 33443 666777776666655543332 23 4666666666666542 2222322 235666666666665443
Q ss_pred C----cccCCCCCCcEEecccccCC
Q 002186 310 P----ESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 310 p----~~~~~l~~L~~L~Ls~N~l~ 330 (955)
+ ..+..+++|+.|++++|.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHHHHHHHhcCCCccEEEeccCCcc
Confidence 3 22344455555555555533
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=4.8e-24 Score=236.48 Aligned_cols=220 Identities=20% Similarity=0.251 Sum_probs=151.1
Q ss_pred CCcEEECCCCcCcccCCccccCC--CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCC-CchhhcCCCcceEE
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNL--TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGS-VPAEISQLEHLKVL 178 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~-~p~~~~~L~~L~~L 178 (955)
.++.+|+++|.+. |..+..+ +++++|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+.++++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 3678999988876 4566666 8899999999988877665 55788899999998888765 77778888888888
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCC-CCCC-CCchhccCCCCCcEEecccc-cccCC-CCccccCCC-CCcEEecc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGN-LLND-QIPAELGMLKTVTHMEIGYN-FYQGN-IPWQLGNMS-EVQYLDIA 253 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~l~~l~~L~~L~l~~n-~l~g~-~p~~~~~l~-~L~~L~Ls 253 (955)
+|++|.+++..|..|+.+++|++|+|++| .+++ .+|..+..+++|++|++++| .+++. ++..+.+++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 88888888777888888888888888888 5665 25666777777777777777 66543 455566666 67777776
Q ss_pred CC--CCC-CCCCccccCCCCCCEEEecccc-ccccCCccCcCCCccCEEEccCCCCCCCCCc---ccCCCCCCcEEeccc
Q 002186 254 GA--NLS-GSIPKELSNLTKLESLFLFRNQ-LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPE---SFADLKNLRLLSLMY 326 (955)
Q Consensus 254 ~n--~l~-~~~p~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~ 326 (955)
+| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +..+. .++.+++|+.|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~ 281 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFG 281 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTT
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccC
Confidence 66 343 3344455556666666666665 444444455555566666665553 12222 344455555555554
Q ss_pred c
Q 002186 327 N 327 (955)
Q Consensus 327 N 327 (955)
|
T Consensus 282 ~ 282 (336)
T 2ast_B 282 I 282 (336)
T ss_dssp S
T ss_pred c
Confidence 4
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.2e-24 Score=246.24 Aligned_cols=94 Identities=18% Similarity=0.234 Sum_probs=52.3
Q ss_pred CCccccCCCCCCEEEccCCcCCccCC----ccccCCCCCcEEeCCCC---CCCCCCchhh-------cCCCcceEEEecC
Q 002186 117 FPVEIFNLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSN---SFSGSVPAEI-------SQLEHLKVLNLAG 182 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~LdL~~N---~l~~~~p~~~-------~~L~~L~~L~Ls~ 182 (955)
++..+..+++|++|+|++|.+....+ ..|..+++|++|+|++| ++++.+|..+ .++++|++|+|++
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~ 103 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSD 103 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCC
Confidence 44455556666666666666654422 23555666666666654 3334445443 4556666666666
Q ss_pred CCCcc----cCCCCcCCCCCCcEEEccCCCCC
Q 002186 183 SYFSG----PIPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 183 n~l~~----~~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
|.+++ .+|..+.++++|++|+|++|.++
T Consensus 104 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 104 NAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp CCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred CcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 66554 34555555666666666666554
No 340
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=1.7e-22 Score=221.12 Aligned_cols=202 Identities=18% Similarity=0.154 Sum_probs=177.3
Q ss_pred CCCCcEEECCCCcCcccCCccc--cCCCCCCEEEccCCcCCccCC----ccccCCCCCcEEeCCCCCCCCCCchhhcCCC
Q 002186 100 FNELVDLNLSHNSFSGQFPVEI--FNLTSLISLDISRNNFSGHFP----GGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~ 173 (955)
+..|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+..+++|++|+|++|.+++..|..+++++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 4579999999999999999998 899999999999999998766 4556899999999999999998889999999
Q ss_pred cceEEEecCCCCccc--C--CCCcCCCCCCcEEEccCCCCCCCCch----hccCCCCCcEEecccccccCCCCccccCC-
Q 002186 174 HLKVLNLAGSYFSGP--I--PSQFGSFKSLEFLHLAGNLLNDQIPA----ELGMLKTVTHMEIGYNFYQGNIPWQLGNM- 244 (955)
Q Consensus 174 ~L~~L~Ls~n~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~----~l~~l~~L~~L~l~~n~l~g~~p~~~~~l- 244 (955)
+|++|+|++|.+.+. + +..++.+++|++|+|++|+++. +|. .++.+++|++|++++|.+.+..|..++.+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 999999999998753 2 3345889999999999999963 333 35788999999999999999888888877
Q ss_pred --CCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCC
Q 002186 245 --SEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (955)
Q Consensus 245 --~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (955)
++|++|++++|.++ .+|..+. ++|++|+|++|++++. |. +..+++|+.|+|++|+++.
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999999 6787774 7999999999999975 33 6788999999999999974
No 341
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=6.7e-22 Score=202.91 Aligned_cols=187 Identities=20% Similarity=0.204 Sum_probs=146.7
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|+|.+|.|+.... + .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|++++
T Consensus 4 ~C~C~~~~v~c~~~~l--~-----------~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 66 (208)
T 2o6s_A 4 RCSCSGTTVECYSQGR--T-----------SVPTGI----PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS 66 (208)
T ss_dssp TCEEETTEEECCSSCC--S-----------SCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCEECCCEEEecCCCc--c-----------CCCCCC----CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc
Confidence 4568999999986321 1 122222 4578999999999998777778899999999999999997
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..+..|..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..+..
T Consensus 67 ~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 146 (208)
T 2o6s_A 67 LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDR 146 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhcc
Confidence 77777899999999999999999776777889999999999999998777777889999999999999998766666777
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCC
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTK 270 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~ 270 (955)
+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|.+++.++.
T Consensus 147 l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 147 LTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 8888888887776554 3345666777777777777766665543
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=5.9e-22 Score=208.11 Aligned_cols=198 Identities=16% Similarity=0.231 Sum_probs=164.3
Q ss_pred CCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-CCCCCchhhcCCCcceEEEecC-CCCcccCCCCcCCCCCCcEE
Q 002186 125 TSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQLEHLKVLNLAG-SYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 125 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-l~~~~p~~~~~L~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L 202 (955)
++|++|+|++|++++..+..|+.+++|++|++++|. +++..+..|.++++|++|+|++ |.+++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 389999999999998888889999999999999997 8776667889999999999998 89987777788889999999
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCc---EEeccCC-CCCCCCCccccCCCCCC-EEEec
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQ---YLDIAGA-NLSGSIPKELSNLTKLE-SLFLF 277 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~---~L~Ls~n-~l~~~~p~~l~~l~~L~-~L~L~ 277 (955)
++++|.+++ +|. + .++++|+ +|++++| .+++..+..|.++++|+ +|+++
T Consensus 111 ~l~~n~l~~-lp~-~------------------------~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-L------------------------TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEEECCCS-CCC-C------------------------TTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred eCCCCCCcc-ccc-c------------------------ccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 999888865 443 3 3344444 8888888 78776677789999999 99999
Q ss_pred cccccccCCccCcCCCccCEEEccCCC-CCCCCCcccCCC-CCCcEEecccccCCCCCccccCCCCCccEEEccCCc
Q 002186 278 RNQLAGQVPWEFSRVTTLKSLDLSDNR-LSGPIPESFADL-KNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (955)
Q Consensus 278 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 352 (955)
+|+++...+..|.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++.
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNTW 237 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC-
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCcc
Confidence 99999655555655 899999999995 998778889999 9999999999999854 443 67889999998763
No 343
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.87 E-value=1.2e-23 Score=235.49 Aligned_cols=252 Identities=20% Similarity=0.226 Sum_probs=198.0
Q ss_pred EEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCc----hhhcCCC-cceEEEecCCCCcccCCCCcCCC-----CC
Q 002186 129 SLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVP----AEISQLE-HLKVLNLAGSYFSGPIPSQFGSF-----KS 198 (955)
Q Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p----~~~~~L~-~L~~L~Ls~n~l~~~~p~~~~~l-----~~ 198 (955)
+++|++|.++|.+|..+...++|++|||++|.+++..+ ..+.+++ +|++|+|++|.+++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 57899999999999888888889999999999998777 7788898 99999999999998777777765 99
Q ss_pred CcEEEccCCCCCCCCchhccC----C-CCCcEEecccccccCCCCcccc----C-CCCCcEEeccCCCCCCCCC----cc
Q 002186 199 LEFLHLAGNLLNDQIPAELGM----L-KTVTHMEIGYNFYQGNIPWQLG----N-MSEVQYLDIAGANLSGSIP----KE 264 (955)
Q Consensus 199 L~~L~L~~N~l~~~~p~~l~~----l-~~L~~L~l~~n~l~g~~p~~~~----~-l~~L~~L~Ls~n~l~~~~p----~~ 264 (955)
|++|+|++|.+++..+..+.. + ++|++|++++|.+++..+..+. . .++|++|++++|.+++..+ ..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 999999999998877775544 4 8999999999998877665543 3 3689999999999885443 33
Q ss_pred ccCCC-CCCEEEeccccccccCCccCc----CC-CccCEEEccCCCCCCC----CCcccCC-CCCCcEEecccccCCCCC
Q 002186 265 LSNLT-KLESLFLFRNQLAGQVPWEFS----RV-TTLKSLDLSDNRLSGP----IPESFAD-LKNLRLLSLMYNEMSGTV 333 (955)
Q Consensus 265 l~~l~-~L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 333 (955)
+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|.++.. ++..+.. .++|+.|++++|.+++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 899999999999877664443 34 5899999999998863 3444544 358999999999988754
Q ss_pred c----cccCCCCCccEEEccCCcCccc-------CCcccCCCCCCCeeecCCCccccc
Q 002186 334 P----ESLVQLPSLEILFIWNNYFSGS-------LPENLGRNSKLRWVDVSTNNFNGS 380 (955)
Q Consensus 334 p----~~l~~l~~L~~L~L~~N~l~~~-------~p~~~~~~~~L~~L~ls~N~l~g~ 380 (955)
+ ..+..+++|+.|++++|.+.+. ++..+..+++|+.||+++|.+.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 4 3456778899999998885432 334566777788888888887654
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.86 E-value=9.6e-24 Score=238.79 Aligned_cols=233 Identities=17% Similarity=0.174 Sum_probs=155.1
Q ss_pred CCCCcEEECCCCcCcccCC----ccccCCCCCCEEEccCC---cCCccCCccc-------cCCCCCcEEeCCCCCCCC--
Q 002186 100 FNELVDLNLSHNSFSGQFP----VEIFNLTSLISLDISRN---NFSGHFPGGI-------QSLRNLLVLDAFSNSFSG-- 163 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p----~~~~~l~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~LdL~~N~l~~-- 163 (955)
++.|+.|+|++|.+++..+ ..+..+++|++|+|++| ++.+.+|..+ ..+++|++|+|++|.+++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 6789999999999987644 45778999999999996 5566777665 789999999999999997
Q ss_pred --CCchhhcCCCcceEEEecCCCCcccCCCCcC----CC---------CCCcEEEccCCCCC-CCCc---hhccCCCCCc
Q 002186 164 --SVPAEISQLEHLKVLNLAGSYFSGPIPSQFG----SF---------KSLEFLHLAGNLLN-DQIP---AELGMLKTVT 224 (955)
Q Consensus 164 --~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~~l~~l~~L~ 224 (955)
.+|..+.++++|++|+|++|.++...+..+. .+ ++|++|+|++|+++ +.+| ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 4788899999999999999999754444333 33 89999999999987 3444 3555666777
Q ss_pred EEeccccccc--C---CCCccccCCCCCcEEeccCCCCC----CCCCccccCCCCCCEEEecccccccc----CCccC--
Q 002186 225 HMEIGYNFYQ--G---NIPWQLGNMSEVQYLDIAGANLS----GSIPKELSNLTKLESLFLFRNQLAGQ----VPWEF-- 289 (955)
Q Consensus 225 ~L~l~~n~l~--g---~~p~~~~~l~~L~~L~Ls~n~l~----~~~p~~l~~l~~L~~L~L~~N~l~~~----~p~~~-- 289 (955)
.|++++|.+. | .+|..+.++++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ++..+
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~ 270 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK 270 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhh
Confidence 7777776655 2 22334555566666666666553 34455555555555555555555443 22233
Q ss_pred cCCCccCEEEccCCCCCC----CCCccc-CCCCCCcEEecccccCCCC
Q 002186 290 SRVTTLKSLDLSDNRLSG----PIPESF-ADLKNLRLLSLMYNEMSGT 332 (955)
Q Consensus 290 ~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~ 332 (955)
..+++|++|+|++|.+++ .+|..+ .++++|+.|++++|.+++.
T Consensus 271 ~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 271 LENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp CSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred ccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 224555555555555554 234333 3345555555555555443
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=8.3e-21 Score=200.88 Aligned_cols=110 Identities=19% Similarity=0.209 Sum_probs=72.4
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
..+.++++++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3566777777776 4555444 567777777777776666667777777777777777766666666666677777777
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
+|.+++..+..|..+++|++|+|++|.+++..+
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 124 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS 124 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcCh
Confidence 666665555666666666666666666654333
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=3.6e-21 Score=210.05 Aligned_cols=192 Identities=23% Similarity=0.408 Sum_probs=108.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++. +| .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++ + +.+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~-~~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-V-SAIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-C-GGGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-c-hhhcCCCCCCEEE
Confidence 3445555555555542 22 34555555555555555543322 5555555555555555543 1 2344555555555
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++. |. +..+++|++|++++|.++ +..+ ++++++|++|++++|.+++
T Consensus 114 l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~------------------------~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 114 LTSTQITDV-TP-LAGLSNLQVLYLDLNQIT------------------------NISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CTTSCCCCC-GG-GTTCTTCCEEECCSSCCC------------------------CCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCCCCCc-hh-hcCCCCCCEEECCCCccC------------------------cCcc--ccCCCCccEEEccCCcCCC
Confidence 555555432 21 445555555555555444 3222 5556666666666666664
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSG 331 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 331 (955)
..+ +..+++|++|++++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|++++|.+++
T Consensus 166 ~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 166 LTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred Chh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 322 6667777777777777765433 667777777777777777544 36777788888888887764
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=3.8e-21 Score=209.86 Aligned_cols=209 Identities=22% Similarity=0.362 Sum_probs=160.1
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.+.+..+.+...+ .+..+++|++|++++|.+.. +| .+..+++|++|+|++|.+++.. . +.++++|++|+|++|.
T Consensus 23 ~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~-~-~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 23 KIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLA-P-LKNLTKITELELSGNP 96 (308)
T ss_dssp HHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCG-G-GTTCCSCCEEECCSCC
T ss_pred HHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCCh-h-HccCCCCCEEEccCCc
Confidence 3445555555433 24567788888888887764 34 5777777777777777777533 3 7777777777777777
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
+++. | .+..+++|++|+|++|.+++ +| .+.++++|++|++++|.+++..+
T Consensus 97 l~~~-~-~~~~l~~L~~L~l~~n~l~~-------------------------~~-~l~~l~~L~~L~l~~n~l~~~~~-- 146 (308)
T 1h6u_A 97 LKNV-S-AIAGLQSIKTLDLTSTQITD-------------------------VT-PLAGLSNLQVLYLDLNQITNISP-- 146 (308)
T ss_dssp CSCC-G-GGTTCTTCCEEECTTSCCCC-------------------------CG-GGTTCTTCCEEECCSSCCCCCGG--
T ss_pred CCCc-h-hhcCCCCCCEEECCCCCCCC-------------------------ch-hhcCCCCCCEEECCCCccCcCcc--
Confidence 7642 2 46667777777777766653 22 26678889999999999986544
Q ss_pred ccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCcc
Q 002186 265 LSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLE 344 (955)
Q Consensus 265 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 344 (955)
+..+++|++|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+
T Consensus 147 l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~ 220 (308)
T 1h6u_A 147 LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLF 220 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCC
T ss_pred ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCC
Confidence 8899999999999999997544 8899999999999999997544 8999999999999999997653 88999999
Q ss_pred EEEccCCcCcc
Q 002186 345 ILFIWNNYFSG 355 (955)
Q Consensus 345 ~L~L~~N~l~~ 355 (955)
.|++++|.+++
T Consensus 221 ~L~l~~N~i~~ 231 (308)
T 1h6u_A 221 IVTLTNQTITN 231 (308)
T ss_dssp EEEEEEEEEEC
T ss_pred EEEccCCeeec
Confidence 99999999975
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=8e-22 Score=230.85 Aligned_cols=193 Identities=24% Similarity=0.350 Sum_probs=106.6
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
|+.|+|++|.+++ +|..+. ++|++|+|++|+|+ .+| ..+++|++|+|++|.+++ +|. +.+ +|++|+|++
T Consensus 61 L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~ 129 (571)
T 3cvr_A 61 FSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDN 129 (571)
T ss_dssp CSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCS
T ss_pred ccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCC
Confidence 4556666666665 554442 56666666666666 445 345666666666666665 554 443 666666666
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.+++ +|. .+++|++|+|++|.+++ +|. .+++|+.|++++|.+++ +|. +. ++|++|++++|.++ .+|
T Consensus 130 N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 130 NQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 66665 444 45666666666666654 333 23344444444443333 332 22 34444444444444 222
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
. +.. +| +.....|+.|+|++|+|+ .+|..+..+++|+.|++++|.+++.+|..+..+
T Consensus 197 ~-~~~--~L-----------------~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 197 A-VPV--RN-----------------HHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C-CC---------------------------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred h-HHH--hh-----------------hcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 2 211 11 011122377777777777 366667677888888888888877777766554
No 349
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=2.4e-20 Score=207.66 Aligned_cols=246 Identities=16% Similarity=0.097 Sum_probs=152.2
Q ss_pred CCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
+.|+|..|.|+... ++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.
T Consensus 7 C~C~~~~v~C~~~~------------Lt-~iP~~l----~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~ 69 (350)
T 4ay9_X 7 CHCSNRVFLCQESK------------VT-EIPSDL----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 69 (350)
T ss_dssp SEEETTEEEEESTT------------CC-SCCTTC----CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCE
T ss_pred cEeeCCEEEecCCC------------CC-ccCcCc----CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCc
Confidence 34788888887522 21 234332 34688888998888866666788888888888888888765
Q ss_pred CC-ccccCCCCCcE-EeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccC-CCCCCCCchhc
Q 002186 141 FP-GGIQSLRNLLV-LDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG-NLLNDQIPAEL 217 (955)
Q Consensus 141 ~p-~~~~~l~~L~~-LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l 217 (955)
+| ..|.++++|+. ++++.|++++..|..|.++++|++|++++|.+++..+..+....++..|++.+ |.+....+..+
T Consensus 70 i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f 149 (350)
T 4ay9_X 70 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSF 149 (350)
T ss_dssp ECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSS
T ss_pred cChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccch
Confidence 55 45788877664 56667888877777788888888888888888776666666777777777755 34443333333
Q ss_pred cCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecc-ccccccCCccCcCCCccC
Q 002186 218 GMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFR-NQLAGQVPWEFSRVTTLK 296 (955)
Q Consensus 218 ~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~ 296 (955)
..+. ..++.|++++|+++. +|......++|++|++.+ |.++...+..|..+++|+
T Consensus 150 ~~~~-----------------------~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~ 205 (350)
T 4ay9_X 150 VGLS-----------------------FESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPV 205 (350)
T ss_dssp TTSB-----------------------SSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCS
T ss_pred hhcc-----------------------hhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccc
Confidence 3322 235555555555553 333333445566666653 444433334566666667
Q ss_pred EEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCC
Q 002186 297 SLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNN 351 (955)
Q Consensus 297 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N 351 (955)
+|||++|+|+...+..|. +|+.|.+.++.--..+| .+..+++|+.+++.++
T Consensus 206 ~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 206 ILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp EEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCH
T ss_pred hhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCC-CchhCcChhhCcCCCC
Confidence 777777766654433333 33334333333233445 3566777777777654
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.9e-20 Score=189.69 Aligned_cols=177 Identities=16% Similarity=0.152 Sum_probs=121.1
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGS 183 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n 183 (955)
+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|+.+++|++|++++|.+++..+..|.++++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 34667777776 345444 468999999999998777777888999999999999988766667788889999999999
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCc
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPK 263 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~ 263 (955)
.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+++..+..+.++++|++|++++|.+.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~--- 163 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT--- 163 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC---
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC---
Confidence 88877667788888888888888888766555566666666666666655544444445555555555555544322
Q ss_pred cccCCCCCCEEEeccccccccCCccCc
Q 002186 264 ELSNLTKLESLFLFRNQLAGQVPWEFS 290 (955)
Q Consensus 264 ~l~~l~~L~~L~L~~N~l~~~~p~~~~ 290 (955)
+++|++|+++.|+++|.+|..++
T Consensus 164 ----~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 164 ----CPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp ----TTTTHHHHHHHHHCTTTBBCTTS
T ss_pred ----CCCHHHHHHHHHhCCceeeccCc
Confidence 23344444444444444444433
No 351
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=4.1e-20 Score=205.75 Aligned_cols=239 Identities=17% Similarity=0.177 Sum_probs=173.9
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCch-hhcCCCcceE-EEecCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPA-EISQLEHLKV-LNLAGS 183 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~-~~~~L~~L~~-L~Ls~n 183 (955)
++.++++++ .+|..+ .+++++|+|++|+|+...++.|.++++|++|||++|.+.+.+|. .|.++++|++ +.+++|
T Consensus 14 v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N 90 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 90 (350)
T ss_dssp EEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEET
T ss_pred EEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCC
Confidence 455677777 567665 36789999999999876667788899999999999888766654 5778877664 666778
Q ss_pred CCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccC-CCCCCCCC
Q 002186 184 YFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAG-ANLSGSIP 262 (955)
Q Consensus 184 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~-n~l~~~~p 262 (955)
+++...|..|.++++|++|++++|+++...+..+. ...++..|++.+ +++....+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~------------------------~~~~l~~l~l~~~~~i~~l~~ 146 (350)
T 4ay9_X 91 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKI------------------------HSLQKVLLDIQDNINIHTIER 146 (350)
T ss_dssp TCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTC------------------------CBSSCEEEEEESCTTCCEECT
T ss_pred cccccCchhhhhccccccccccccccccCCchhhc------------------------ccchhhhhhhccccccccccc
Confidence 88877788888888888888888888654443333 333455555544 34443344
Q ss_pred ccccCCC-CCCEEEeccccccccCCccCcCCCccCEEEccC-CCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCC
Q 002186 263 KELSNLT-KLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSD-NRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQL 340 (955)
Q Consensus 263 ~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 340 (955)
..+..+. .++.|+|++|+++...+..| ..++|++|++++ |.++...++.|..+++|+.|++++|+++...+..+
T Consensus 147 ~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~--- 222 (350)
T 4ay9_X 147 NSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL--- 222 (350)
T ss_dssp TSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---
T ss_pred cchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---
Confidence 4555554 68899999999997655555 567899999985 66776555679999999999999999996555444
Q ss_pred CCccEEEccCCcCcccCCcccCCCCCCCeeecCCCc
Q 002186 341 PSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNN 376 (955)
Q Consensus 341 ~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~ 376 (955)
.+|+.|.+.++.--..+|. +..+++|+.++++++.
T Consensus 223 ~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 223 ENLKKLRARSTYNLKKLPT-LEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSCHH
T ss_pred ccchHhhhccCCCcCcCCC-chhCcChhhCcCCCCc
Confidence 4556666555544446774 7889999999998764
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83 E-value=3.1e-21 Score=207.07 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=108.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-------------------hHHHHHHHHHHHhccCCCCceeEeEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-------------------RIKIVSEFITRIGTVRHKNLIRLLGFC 755 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-------------------~~~~~~~e~~~l~~l~H~niv~l~g~~ 755 (955)
..+.||+|+||.||+|...+|+.||||.++.+.. ....+.+|++++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 5588999999999999998899999999964321 2456789999999998 4 6666655
Q ss_pred EcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 756 YNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 756 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|||++ ++.+||+|||+++
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~----~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV----ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred ec-cceEEEEEecCCCcHHH-cch----hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 43 55699999999999998 532 23456999999999999999 999999999999999 9999999999986
Q ss_pred cc
Q 002186 836 LT 837 (955)
Q Consensus 836 ~~ 837 (955)
..
T Consensus 241 ~~ 242 (282)
T 1zar_A 241 EV 242 (282)
T ss_dssp ET
T ss_pred EC
Confidence 43
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=1.2e-19 Score=212.56 Aligned_cols=187 Identities=25% Similarity=0.403 Sum_probs=137.2
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEcc
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLA 205 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 205 (955)
+|++|+|++|.+++ +|..+ +++|++|+|++|.++ .+| ..+++|++|+|++|.+++ +|. |.+ +|++|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78888998888886 66655 377888888888887 566 456788888888888876 666 555 77888888
Q ss_pred CCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccC
Q 002186 206 GNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQV 285 (955)
Q Consensus 206 ~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 285 (955)
+|.+++ +|. . +++|++|++++|.+++ +|. .+++|++|+|++|++++ +
T Consensus 129 ~N~l~~-lp~---~------------------------l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-l 175 (571)
T 3cvr_A 129 NNQLTM-LPE---L------------------------PALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-L 175 (571)
T ss_dssp SSCCSC-CCC---C------------------------CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---c------------------------CccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-c
Confidence 777765 443 2 4455555666666654 443 35667777777777766 4
Q ss_pred CccCcCCCccCEEEccCCCCCCCCCcccCCCCCC-------cEEecccccCCCCCccccCCCCCccEEEccCCcCcccCC
Q 002186 286 PWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNL-------RLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLP 358 (955)
Q Consensus 286 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 358 (955)
|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+++ .+|..+..+++|+.|++++|.+++.+|
T Consensus 176 p~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 176 PE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp CC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 44 54 67888888888887 4555 554 66 99999999999 578888889999999999999999999
Q ss_pred cccCCC
Q 002186 359 ENLGRN 364 (955)
Q Consensus 359 ~~~~~~ 364 (955)
..+..+
T Consensus 248 ~~l~~l 253 (571)
T 3cvr_A 248 ESLSQQ 253 (571)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877654
No 354
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.8e-19 Score=185.07 Aligned_cols=159 Identities=23% Similarity=0.246 Sum_probs=124.2
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|+|.+|.|+... + +.+|..+ .+.|++|+|++|.+++..|..|.++++|++|+|++|++++
T Consensus 16 ~~~Cs~~~v~c~~~~--l-----------~~ip~~~----~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKR--H-----------ASVPAGI----PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp TCEEETTEEECTTSC--C-----------SSCCSCC----CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCEEeCCEeEccCCC--c-----------CccCCCC----CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 567999999998622 1 2333322 3578889999999998888888889999999999999887
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..+..|..+++|++|||++|.+++..+..|..+++|++|+|++|.++ .+|..+..+++|++|+|++|++++..+..+..
T Consensus 79 i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 157 (229)
T 3e6j_A 79 LPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDR 157 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTT
T ss_pred cChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhC
Confidence 66677888888888888888888776677788888888888888888 67888888888888888888887666666666
Q ss_pred CCCCcEEecccccccCC
Q 002186 220 LKTVTHMEIGYNFYQGN 236 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~ 236 (955)
+++|+.|++++|.+.+.
T Consensus 158 l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 158 LSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CTTCCEEECTTSCBCTT
T ss_pred CCCCCEEEeeCCCccCC
Confidence 77777777766665543
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=1e-20 Score=230.03 Aligned_cols=264 Identities=19% Similarity=0.192 Sum_probs=119.5
Q ss_pred ChhhHHHHHHhhhhCCC-CCCCCCCCCCCCCCCCCCCCCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCC
Q 002186 24 NDPYSEALLSLKSELVD-DFNSLHDWFVPPGVNPAGKIYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNE 102 (955)
Q Consensus 24 ~~~~~~all~~k~~~~~-~~~~l~~w~~~~~~~~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~ 102 (955)
.+.++++|+++..+... ....-..|... ....+.|.++.++. .+++.++|..+++.+. +. ..
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~-------~~ 192 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-------STPSGTATNSAVST--PLTPKIELFANGKDEA-NQ-------AL 192 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-------CCccccCCCceecC--CccceEEeeCCCCCcc-hh-------hH
Confidence 35678999999887632 22334456433 24567899988875 5688888887777653 22 12
Q ss_pred CcEEECCCCcCcc---------cCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCC
Q 002186 103 LVDLNLSHNSFSG---------QFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (955)
Q Consensus 103 L~~L~Ls~n~l~~---------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~ 173 (955)
++.++|++|.|.+ ..|..|..+++|++|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|++|+
T Consensus 193 l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 270 (727)
T 4b8c_D 193 LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS 270 (727)
T ss_dssp -----------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT
T ss_pred hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC
Confidence 3445555554443 44677888888888888888887 56767778888888888888888 7788888888
Q ss_pred cceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCC-CcEEec
Q 002186 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSE-VQYLDI 252 (955)
Q Consensus 174 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~-L~~L~L 252 (955)
+|++|+|++|.++ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..+++
T Consensus 271 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l 348 (727)
T 4b8c_D 271 NLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYL 348 (727)
T ss_dssp TCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhh
Confidence 8888888888888 67888888888888888888885 56777777777777777777777777766554322 223566
Q ss_pred cCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 253 AGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 253 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
++|.+++.+|.. |+.|+++.|... - ...+.+.+..+..+..+..+....+++|-+.
T Consensus 349 ~~N~l~~~~p~~------l~~l~l~~n~~~---~-------------~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 349 RDNRPEIPLPHE------RRFIEINTDGEP---Q-------------REYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHCCCCCCCCCC---------------------------------------------------------------CCC
T ss_pred ccCcccCcCccc------cceeEeeccccc---c-------------cccCCccccccchhhcccccceeeeeccccc
Confidence 677776666643 334444444100 0 0011233334445556666667777777665
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=7.7e-19 Score=181.44 Aligned_cols=161 Identities=19% Similarity=0.240 Sum_probs=133.8
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCC-ccccCCCCCCEEEccCCcCC
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFP-VEIFNLTSLISLDISRNNFS 138 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 138 (955)
.+.|.|..+.|+. +.+. .+|..+ ...+++|+|++|.|++..| ..|..+++|++|+|++|+++
T Consensus 8 ~C~C~~~~l~~s~------------n~l~-~iP~~~----~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~ 70 (220)
T 2v70_A 8 KCRCEGTTVDCSN------------QKLN-KIPEHI----PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKIT 70 (220)
T ss_dssp TCEEETTEEECCS------------SCCS-SCCSCC----CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCC
T ss_pred CCEECCCEeEeCC------------CCcc-cCccCC----CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCC
Confidence 3446676666654 3333 245433 3457899999999998865 45889999999999999999
Q ss_pred ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhcc
Q 002186 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG 218 (955)
Q Consensus 139 ~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 218 (955)
+..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..+.
T Consensus 71 ~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 150 (220)
T 2v70_A 71 DIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFD 150 (220)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTT
T ss_pred EECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhc
Confidence 98888999999999999999999988888899999999999999999998899999999999999999999988888888
Q ss_pred CCCCCcEEecccccccCCC
Q 002186 219 MLKTVTHMEIGYNFYQGNI 237 (955)
Q Consensus 219 ~l~~L~~L~l~~n~l~g~~ 237 (955)
.+++|+.|++++|.+.+..
T Consensus 151 ~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 151 TLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TCTTCCEEECCSCCEECSG
T ss_pred CCCCCCEEEecCcCCcCCC
Confidence 8888888888888776543
No 357
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=9.8e-19 Score=180.63 Aligned_cols=158 Identities=22% Similarity=0.296 Sum_probs=130.7
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
.+.|.|..|.|.... +. .+|..+ ...|+.|+|++|.|++..+..|..+++|++|+|++|++++
T Consensus 8 ~C~C~~~~v~c~~~~------------l~-~iP~~l----~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~ 70 (220)
T 2v9t_B 8 ACTCSNNIVDCRGKG------------LT-EIPTNL----PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE 70 (220)
T ss_dssp TSEEETTEEECTTSC------------CS-SCCSSC----CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE
T ss_pred CCEECCCEEEcCCCC------------cC-cCCCcc----CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC
Confidence 455888888887522 11 233322 2578999999999998888899999999999999999999
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccC
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGM 219 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 219 (955)
..|..|..+++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..+..
T Consensus 71 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 150 (220)
T 2v9t_B 71 LAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSP 150 (220)
T ss_dssp ECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTT
T ss_pred cCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhC
Confidence 88999999999999999999999766666889999999999999999888889999999999999999998877777777
Q ss_pred CCCCcEEeccccccc
Q 002186 220 LKTVTHMEIGYNFYQ 234 (955)
Q Consensus 220 l~~L~~L~l~~n~l~ 234 (955)
+++|+.|++++|.+.
T Consensus 151 l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 151 LRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred CCCCCEEEeCCCCcC
Confidence 777777777777654
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=5.7e-19 Score=209.16 Aligned_cols=190 Identities=23% Similarity=0.307 Sum_probs=118.9
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEec
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLA 181 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls 181 (955)
.+..++|+.+.+....+ +..|++|++|++++|.+... | .|..+++|++|+|++|.+++..| +.++++|++|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 45556666666665443 45677777888887777643 3 47777788888888887776444 7777788888888
Q ss_pred CCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCC
Q 002186 182 GSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSI 261 (955)
Q Consensus 182 ~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~ 261 (955)
+|.+++ +| .|..+++|++|+|++|.+++. ..+..+++|+.|+|++|.+.+. ..+..+++|+.|+|++|.+++..
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCch
Confidence 877764 23 577777777777777777652 3455666666666666655543 34555555556666555555444
Q ss_pred CccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCC
Q 002186 262 PKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSG 307 (955)
Q Consensus 262 p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 307 (955)
| +..+++|+.|+|++|++++. ..+..+++|+.|+|++|++.+
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred h--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 3 55555555555555555543 234555555555555555543
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=5e-19 Score=191.32 Aligned_cols=188 Identities=29% Similarity=0.335 Sum_probs=98.2
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+..+++..+.+.+..+ +..+++|++|++++|.+... | .+..+++|++|+|++|.+++..+ +.++++|++|+|++
T Consensus 26 ~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3344555555544322 34566677777777766643 3 36666677777777776665333 66666777777777
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP 262 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p 262 (955)
|.+++ +| .+..+++|++|+|++|.+++. ..+..+++|+.|++++|.+++.
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-------------------------- 149 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-------------------------- 149 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--------------------------
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--------------------------
Confidence 76664 22 366666666666666666542 2344444444444444443322
Q ss_pred ccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCC
Q 002186 263 KELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMS 330 (955)
Q Consensus 263 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 330 (955)
..+..+++|++|++++|++++..| +..+++|+.|++++|++++. | .+..+++|+.|++++|+++
T Consensus 150 ~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 150 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 233344444444444444443322 44444444444444444432 2 2444555555555555544
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.8e-18 Score=186.94 Aligned_cols=170 Identities=22% Similarity=0.295 Sum_probs=144.6
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++.. | .+..+++|++|+|++|++++..| +..+++|++|+|++|.+++ + +.+.++++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C-hhhccCCCCCEEE
Confidence 67899999999999854 4 48899999999999999997654 9999999999999999986 3 4599999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++. ..+..+++|++|++++|.+++. ..+..+++|++|++++|.+.+..| +..+++|++|++++|.+++
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~ 192 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 192 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC
Confidence 999999864 4689999999999999999875 678889999999999998876554 7788888888888888875
Q ss_pred CCCccccCCCCCCEEEeccccccc
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAG 283 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~ 283 (955)
+| .+..+++|+.|++++|.++.
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -Ch-hhccCCCCCEEECcCCcccC
Confidence 33 37778888888888887765
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=2e-18 Score=192.92 Aligned_cols=161 Identities=24% Similarity=0.187 Sum_probs=121.2
Q ss_pred CCCcEEECCCCcCcccCCcccc-CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIF-NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|..+++|++|||++|.+++..+..|.++++|++|+
T Consensus 39 ~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 39 SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 4588899999999988888787 899999999999999988888899999999999999999877777888899999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..|..|.++++|++|+|++|.+++..+..+.. +.++++|++|+|++|.+++
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~---------------------~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKD---------------------GNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------------------CTTCCEEECCSSCCCC
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcC---------------------cccCCcCCEEECCCCCCCc
Confidence 9999998888888999999999999999887543333310 1334555555555555554
Q ss_pred CCCccccCCCC--CCEEEecccccc
Q 002186 260 SIPKELSNLTK--LESLFLFRNQLA 282 (955)
Q Consensus 260 ~~p~~l~~l~~--L~~L~L~~N~l~ 282 (955)
..+..+..++. ++.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44444555554 356666666654
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=3.8e-18 Score=176.18 Aligned_cols=150 Identities=18% Similarity=0.228 Sum_probs=111.1
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.+++++|.++ .+|..+. ++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4677888887 4566554 689999999999998888888999999999999999988888888888899999999998
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCC
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANL 257 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l 257 (955)
++...+..|.++++|++|+|++|++++..|..+..+++|++|++++|.+++..+..+..+++|++|++++|.+
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 8866666678888888888888888876666666665555555555555544444444444444444444443
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.6e-18 Score=177.40 Aligned_cols=152 Identities=14% Similarity=0.148 Sum_probs=104.0
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCC-ccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFP-GGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+.+++++|.++. +|..+. ..+++|+|++|++++..| ..|..+++|++|+|++|.+++..+..|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 367888888874 666554 356788888888887755 4477888888888888888776666777788888888888
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~ 258 (955)
|.+++..|..|.++++|++|+|++|++++..|..+..+++|+.|++++|.+++..|..+..+++|++|++++|.+.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 8877776777777777777777777777666666655555555555555555444444444444444444444443
No 364
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=1.6e-18 Score=193.63 Aligned_cols=175 Identities=22% Similarity=0.191 Sum_probs=134.9
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCcccc-CCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQ-SLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
+++++|.++ .+|..+. ..+++|+|++|+|++..+..|. .+++|++|+|++|++++..|..|.++++|++|+|++|.
T Consensus 23 l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~ 99 (361)
T 2xot_A 23 LSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNH 99 (361)
T ss_dssp EECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCc
Confidence 455556665 3565554 4589999999999988888887 89999999999999988777888899999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCcc
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKE 264 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~ 264 (955)
+++..+..|.++++|++|+|++|.+++..|..+. ++++|++|+|++|.+++..+..
T Consensus 100 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~------------------------~l~~L~~L~L~~N~l~~l~~~~ 155 (361)
T 2xot_A 100 LHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFE------------------------DMAQLQKLYLSQNQISRFPVEL 155 (361)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT------------------------TCTTCCEEECCSSCCCSCCGGG
T ss_pred CCcCCHHHhCCCcCCCEEECCCCcccEECHHHhC------------------------CcccCCEEECCCCcCCeeCHHH
Confidence 9877777888888888888888888765555444 4555555555666665433333
Q ss_pred c---cCCCCCCEEEeccccccccCCccCcCCCc--cCEEEccCCCCCC
Q 002186 265 L---SNLTKLESLFLFRNQLAGQVPWEFSRVTT--LKSLDLSDNRLSG 307 (955)
Q Consensus 265 l---~~l~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 307 (955)
+ ..+++|+.|+|++|++++..+..+..++. ++.|+|++|.+..
T Consensus 156 ~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 156 IKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp TC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred hcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 4 57899999999999999776667777877 4889999999874
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1.8e-21 Score=229.25 Aligned_cols=203 Identities=20% Similarity=0.199 Sum_probs=111.6
Q ss_pred cCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-------------CCCCCchhhcCCCcceEEE-ecCCCCcc
Q 002186 122 FNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-------------FSGSVPAEISQLEHLKVLN-LAGSYFSG 187 (955)
Q Consensus 122 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-------------l~~~~p~~~~~L~~L~~L~-Ls~n~l~~ 187 (955)
..+++|+.|+|++|+++ .+|..++++++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 45667777777777765 567777777777777776553 4556666677777777776 4544322
Q ss_pred cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccC
Q 002186 188 PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSN 267 (955)
Q Consensus 188 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~ 267 (955)
+|+.+.+++|.++...+ ..|+.|++++|.+++ +|. ++++++|++|++++|.++ .+|..+++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ----------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 22222233332221110 123444444444443 333 455555555555555555 45555555
Q ss_pred CCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCC-CcccCCCCCCcEEecccccCCCCCccc---cCCCCCc
Q 002186 268 LTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPI-PESFADLKNLRLLSLMYNEMSGTVPES---LVQLPSL 343 (955)
Q Consensus 268 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~---l~~l~~L 343 (955)
+++|++|+|++|++++ +| .+..+++|+.|+|++|++++.. |..|+.+++|+.|++++|.+++..|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 5566666666665554 34 5555666666666666666554 566666666666666666665543321 2235666
Q ss_pred cEEE
Q 002186 344 EILF 347 (955)
Q Consensus 344 ~~L~ 347 (955)
+.|+
T Consensus 563 ~~L~ 566 (567)
T 1dce_A 563 SSIL 566 (567)
T ss_dssp SEEE
T ss_pred CccC
Confidence 6664
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=4.7e-18 Score=201.31 Aligned_cols=178 Identities=21% Similarity=0.269 Sum_probs=156.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+|+.|+|++|.+... | .+..+++|++|+|++|.+++..| +..+++|++|+|++|.+++ +| .+..+++|++|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 67899999999999853 4 68999999999999999997655 9999999999999999986 33 799999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++. +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+.+..| +..+++|+.|+|++|.+++
T Consensus 116 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~ 189 (605)
T 1m9s_A 116 LEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD 189 (605)
T ss_dssp CTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB
T ss_pred ecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC
Confidence 999999863 4589999999999999999875 679999999999999999998776 8999999999999999997
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSR 291 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 291 (955)
. ..+..+++|+.|+|++|.+.+.....+..
T Consensus 190 l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~ 219 (605)
T 1m9s_A 190 L--RALAGLKNLDVLELFSQECLNKPINHQSN 219 (605)
T ss_dssp C--GGGTTCTTCSEEECCSEEEECCCCCCCSS
T ss_pred C--hHHccCCCCCEEEccCCcCcCCccccccc
Confidence 4 46899999999999999998754433333
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=1.2e-17 Score=173.59 Aligned_cols=151 Identities=21% Similarity=0.216 Sum_probs=116.2
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.++.+++.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+..|.++++|++|+|++|.
T Consensus 23 ~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~ 99 (229)
T 3e6j_A 23 TVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQ 99 (229)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCc
Confidence 3566777776 5666554 899999999999999889999999999999999999987666778899999999999999
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
+++..+..|..+++|++|+|++|+++ .+|..+..+++|++|++++|.+.+..+..+..+++|++|++++|.+..
T Consensus 100 l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 100 LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 99877777889999999999999887 566666666666666666666554444445555555555555555543
No 368
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.1e-17 Score=169.65 Aligned_cols=155 Identities=20% Similarity=0.304 Sum_probs=110.6
Q ss_pred ccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCc
Q 002186 121 IFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLE 200 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 200 (955)
...+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 356778888888888887 455 5778888888888888654 345778888888888888888877788888888888
Q ss_pred EEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccc
Q 002186 201 FLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ 280 (955)
Q Consensus 201 ~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~ 280 (955)
+|+|++|.+++..|..++.+++|++|++++|.+.+.+| .+.++++|++|++++|.+++ ++ .+..+++|++|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 88888888877777777777777777777776334454 46666666666666666664 22 45566666666666665
Q ss_pred cc
Q 002186 281 LA 282 (955)
Q Consensus 281 l~ 282 (955)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 54
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=5.3e-19 Score=214.90 Aligned_cols=216 Identities=19% Similarity=0.199 Sum_probs=76.8
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc---------cCCccccCCCCCcEEeCCCCCCCCCCchhhcC
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG---------HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ 171 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---------~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~ 171 (955)
+.++.|+|++|.+.. +|.. .|+.++|+.|.|.+ ..|+.|..+++|++|||++|.+. .+|..+.+
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~-----~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQA-----LLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhh-----HhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 457889999998875 3433 34445555554443 33555666666666666666665 45555556
Q ss_pred CCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEe
Q 002186 172 LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLD 251 (955)
Q Consensus 172 L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~ 251 (955)
+++|++|+|++|.++ .+|..|+++++|++|+|++|.|+ .+|..++.|++|++|+|++|.
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~------------------- 304 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNM------------------- 304 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSC-------------------
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCC-------------------
Confidence 666666666666665 55555666666666666666665 445555555555555555554
Q ss_pred ccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCc-cCEEEccCCCCCCCCCcccCCCCCCcEEecccc---
Q 002186 252 IAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTT-LKSLDLSDNRLSGPIPESFADLKNLRLLSLMYN--- 327 (955)
Q Consensus 252 Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N--- 327 (955)
++ .+|..|+++++|++|+|++|.+++.+|..+..+.. +..++|++|.+++.+|.. |+.|+++.|
T Consensus 305 -----l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~ 372 (727)
T 4b8c_D 305 -----VT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEP 372 (727)
T ss_dssp -----CC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC------------------
T ss_pred -----CC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccc
Confidence 43 34444455555555555555555444443332211 112455555555555543 223333333
Q ss_pred -----cCCCCCccccCCCCCccEEEccCCcCccc
Q 002186 328 -----EMSGTVPESLVQLPSLEILFIWNNYFSGS 356 (955)
Q Consensus 328 -----~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 356 (955)
.+.+..+..+..+..+....++.|.+.+.
T Consensus 373 ~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~ 406 (727)
T 4b8c_D 373 QREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQH 406 (727)
T ss_dssp -----------------------------CCCGG
T ss_pred ccccCCccccccchhhcccccceeeeeccccccc
Confidence 33334444555666777778888877543
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=1.2e-20 Score=222.38 Aligned_cols=204 Identities=18% Similarity=0.184 Sum_probs=152.9
Q ss_pred cCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC-------------CcccCCCCcCCCCCCcEEE-ccCCCCCC
Q 002186 146 QSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-------------FSGPIPSQFGSFKSLEFLH-LAGNLLND 211 (955)
Q Consensus 146 ~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~ 211 (955)
..+++|+.|+|++|.++ .+|..+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 56788889999999887 688889999999999987765 3445555555666666655 444432
Q ss_pred CCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcC
Q 002186 212 QIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSR 291 (955)
Q Consensus 212 ~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 291 (955)
+.|+.+.++.|.+... |. ..|++|++++|.+++ +|. ++.+++|+.|+|++|+++ .+|..|+.
T Consensus 423 ---------~~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 2233344444444321 11 248889999999886 565 888899999999999988 67888888
Q ss_pred CCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCC-ccccCCCCCccEEEccCCcCcccCCcc---cCCCCCC
Q 002186 292 VTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTV-PESLVQLPSLEILFIWNNYFSGSLPEN---LGRNSKL 367 (955)
Q Consensus 292 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~l~~l~~L~~L~L~~N~l~~~~p~~---~~~~~~L 367 (955)
+++|+.|+|++|++++ +| .|+.+++|+.|+|++|++++.. |..+..+++|+.|++++|.+++.+|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 9999999999999987 56 7888999999999999998876 888888999999999999988765532 2336788
Q ss_pred Ceeec
Q 002186 368 RWVDV 372 (955)
Q Consensus 368 ~~L~l 372 (955)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 88764
No 371
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=3.4e-18 Score=181.16 Aligned_cols=134 Identities=14% Similarity=0.095 Sum_probs=104.5
Q ss_pred chhhhccCCCCCceEEEeC-CCCcE--EEEEEeecccch-------------------------HHHHHHHHHHHhccCC
Q 002186 694 TECEEAARPQSAAGCKAVL-PTGIT--VSVKKIEWGATR-------------------------IKIVSEFITRIGTVRH 745 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~-~~g~~--vAvK~~~~~~~~-------------------------~~~~~~e~~~l~~l~H 745 (955)
.....||+|+||.||+|.. .+|+. ||||+++..... ...+.+|++.+.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999999997 78999 999987542111 1357889999999998
Q ss_pred CCc--eeEeEEEEcCCeeEEEEeecCC-C----ChhHHhhcCCCHHHHHHHHHHHHHHHHHHh-cCCCCCcccCCCCCCC
Q 002186 746 KNL--IRLLGFCYNRHQAYLLYDYLPN-G----NLSEKIRTKRDWAAKYKIVLGVARGLCFLH-HDCYPAIPHGDLKASN 817 (955)
Q Consensus 746 ~ni--v~l~g~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~~~~~~i~~~ia~gl~~lH-~~~~~~iiHrdlk~~N 817 (955)
+++ ...+++ +..+|||||+.+ | +|.++... .++.....++.|+++|++||| +. +|+||||||+|
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~N 201 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-LKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEYN 201 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-GGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTTS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-cChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHH
Confidence 864 334432 356899999952 4 66665433 223456789999999999999 77 99999999999
Q ss_pred eeeCCCCCceECcccccccc
Q 002186 818 IVFDENMEPHLAEFGFKYLT 837 (955)
Q Consensus 818 iLl~~~~~~ki~DfGl~~~~ 837 (955)
||++. .++|+|||++...
T Consensus 202 ILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 202 IMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp EEESS--SEEECCCTTCEET
T ss_pred EEEcC--cEEEEECcccccC
Confidence 99998 9999999998654
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.72 E-value=5.7e-18 Score=180.00 Aligned_cols=170 Identities=23% Similarity=0.298 Sum_probs=126.5
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+.+++.+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..| +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 345777888888887544 57788899999999998874 45 68888899999999998886444 88888999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++ +|.. .. ++|++|+|++|.+++. + .+..+++|+.|++++|.+++. | .+..+++|++|++++|.+++
T Consensus 92 L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 99998886 4432 23 8888888888888763 3 477777777777777777653 3 46667777777777777765
Q ss_pred CCCccccCCCCCCEEEecccccccc
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQ 284 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~ 284 (955)
. ..+..+++|+.|++++|.+++.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 5 5566677777777777776654
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=1.9e-17 Score=167.93 Aligned_cols=153 Identities=16% Similarity=0.216 Sum_probs=131.2
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|.+++..|..++.+++|++|+
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~ 118 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLD 118 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEE
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEE
Confidence 678999999999998 556 6899999999999999765 345789999999999999999988888999999999999
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|++|.+++..|..|+.+++|++|++++|.+.+.+| .+..+++|++|++++|.+++ ++ .+..+++|++|++++|++.+
T Consensus 119 Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 119 ISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred ecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 99999998888899999999999999998334556 68999999999999999886 44 68889999999999998764
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.69 E-value=5.8e-18 Score=179.92 Aligned_cols=169 Identities=17% Similarity=0.261 Sum_probs=102.9
Q ss_pred CCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 123 NLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 123 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
++.+++.+++++|.+++.. .+..+++|++|++++|.++. +| .+..+++|++|+|++|.+++..| |.++++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 4667778888888887543 57788888888888888874 45 68888888888888888886544 8888888888
Q ss_pred EccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEecccccc
Q 002186 203 HLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 203 ~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
+|++|++++ +|.. .. ++|+.|++++|.+++. + .+.++++|++|++++|.+++. + .+..+++|++|++++|+++
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~ 163 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEIT 163 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCC
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCc
Confidence 888888875 3321 11 5555555555555432 2 244444455555544444432 1 3444444444444444444
Q ss_pred ccCCccCcCCCccCEEEccCCCCC
Q 002186 283 GQVPWEFSRVTTLKSLDLSDNRLS 306 (955)
Q Consensus 283 ~~~p~~~~~l~~L~~L~Ls~N~l~ 306 (955)
+. ..+..+++|+.|++++|.++
T Consensus 164 ~~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 164 NT--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp BC--TTSTTCCCCCEEEEEEEEEE
T ss_pred ch--HHhccCCCCCEEeCCCCccc
Confidence 33 23344444444444444443
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=1.4e-16 Score=160.58 Aligned_cols=138 Identities=25% Similarity=0.326 Sum_probs=107.9
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCc-cccCCCCCCEEEccCCcCC
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPV-EIFNLTSLISLDISRNNFS 138 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~ 138 (955)
...|.|..+.|+. +++ +.+|..+ ...|++|+|++|.|++..+. .|..+++|++|+|++|+++
T Consensus 5 ~C~C~~~~l~~s~------------~~l-~~ip~~~----~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~ 67 (192)
T 1w8a_A 5 MCHCEGTTVDCTG------------RGL-KEIPRDI----PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67 (192)
T ss_dssp TSEEETTEEECTT------------SCC-SSCCSCC----CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCC
T ss_pred CCEECCCEEEcCC------------CCc-CcCccCC----CCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCC
Confidence 3457777666664 233 2344433 23688899999988877664 4788888999999888888
Q ss_pred ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 139 GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 139 ~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
+..|..|..+++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..+
T Consensus 68 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8888888888888888888888888777778888888888888888888888888888888888888888876544
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.68 E-value=2.1e-16 Score=159.43 Aligned_cols=132 Identities=17% Similarity=0.249 Sum_probs=111.6
Q ss_pred cEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCc-cccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 104 VDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPG-GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 104 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
+.+++++|+++ .+|..+.. +|++|+|++|++++..+. .|+.+++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57899999995 67776654 899999999999877765 488999999999999999988889999999999999999
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p 238 (955)
|.+++..|..|.++++|++|+|++|++++..|..+..+++|++|++++|.+.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999988878877777777777777777665443
No 377
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=9.6e-16 Score=152.42 Aligned_cols=138 Identities=22% Similarity=0.279 Sum_probs=111.8
Q ss_pred CCCccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCc
Q 002186 60 IYACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSG 139 (955)
Q Consensus 60 ~~~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 139 (955)
...|+|.++.|+... +. .+|... .+.|+.|++++|++++..+..|..+++|++|+|++|++++
T Consensus 4 ~C~C~~~~l~~~~~~------------l~-~~p~~~----~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 66 (177)
T 2o6r_A 4 RCSCSGTEIRCNSKG------------LT-SVPTGI----PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQS 66 (177)
T ss_dssp TCEEETTEEECCSSC------------CS-SCCTTC----CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC
T ss_pred CCEeCCCEEEecCCC------------Cc-cCCCCC----CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceE
Confidence 355899999998622 11 123222 4578999999999998777778899999999999999998
Q ss_pred cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc
Q 002186 140 HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP 214 (955)
Q Consensus 140 ~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 214 (955)
..+..|..+++|++|+|++|.+++..+..+.++++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|
T Consensus 67 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 67 LPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred eChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 777778999999999999999997777778889999999999999987666667889999999999998887654
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.64 E-value=3.1e-16 Score=151.14 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=103.5
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 356888999999988 78888888899999999999988876 678888999999999999888788888888889999
Q ss_pred EecCCCCccc-CCCCcCCCCCCcEEEccCCCCCCCCc---hhccCCCCCcEEecc
Q 002186 179 NLAGSYFSGP-IPSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIG 229 (955)
Q Consensus 179 ~Ls~n~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~ 229 (955)
++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|+.|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 9998888863 34778888888888888888876554 456666666666654
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=6.3e-16 Score=152.32 Aligned_cols=132 Identities=16% Similarity=0.127 Sum_probs=100.5
Q ss_pred CCCCcEEECCCCcCc-ccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 100 FNELVDLNLSHNSFS-GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 457888888888887 77888888888888888888888865 678888888888888888887777777778888888
Q ss_pred EecCCCCcccC-CCCcCCCCCCcEEEccCCCCCCCCc---hhccCCCCCcEEecccccc
Q 002186 179 NLAGSYFSGPI-PSQFGSFKSLEFLHLAGNLLNDQIP---AELGMLKTVTHMEIGYNFY 233 (955)
Q Consensus 179 ~Ls~n~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~l~~l~~L~~L~l~~n~l 233 (955)
+|++|.+++.. +..+..+++|++|++++|.+++..+ ..+..+++|++|+++.|..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 88888887632 2677788888888888887775444 3555566666665555543
No 380
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=1.6e-16 Score=175.05 Aligned_cols=262 Identities=15% Similarity=0.133 Sum_probs=155.9
Q ss_pred CCCCcEEECCCCcCcccCCccccC-CCCCCEEEccCCcCC--ccCCccccCCCCCcEEeCCCCCCCCCCchhhcC-----
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFN-LTSLISLDISRNNFS--GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQ----- 171 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~----- 171 (955)
+.+++.|+++++ +.+..-..+.. +++|++|||++|++. ...+..+ +.++.+++..|.+ .+..|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccccc
Confidence 445777777643 11111112223 677888888887776 2211111 1133333333321 1223444
Q ss_pred ---CCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccc----cCCCCcccc--
Q 002186 172 ---LEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFY----QGNIPWQLG-- 242 (955)
Q Consensus 172 ---L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l----~g~~p~~~~-- 242 (955)
+++|+.|+|.+ .++..-+.+|.++++|+.|++++|.+....+..|....++..+..+.+.. ...-+..+.
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 55555555555 45444444555555555555555555544444455444444444333110 000011111
Q ss_pred ------------------------CCCCCcEEeccCCCCCCCCCccc-cCCCCCCEEEeccccccccCCccCcCCCccCE
Q 002186 243 ------------------------NMSEVQYLDIAGANLSGSIPKEL-SNLTKLESLFLFRNQLAGQVPWEFSRVTTLKS 297 (955)
Q Consensus 243 ------------------------~l~~L~~L~Ls~n~l~~~~p~~l-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 297 (955)
...++..+.+.++-.. .....+ ..+++|++|+|++|+++...+..|.++++|+.
T Consensus 176 ~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 176 EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCE
Confidence 1233444444433111 000111 13788999999999998888888999999999
Q ss_pred EEccCCCCCCCCCcccCCCCCCc-EEecccccCCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeec
Q 002186 298 LDLSDNRLSGPIPESFADLKNLR-LLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDV 372 (955)
Q Consensus 298 L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~l 372 (955)
++|++| +....+.+|.++++|+ .+++.. +++..-+..|.++++|+.++++.|.++...+..|.++++|+.++.
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 999988 7777778899999999 999988 676666788999999999999999998877788999999998763
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.6e-15 Score=150.29 Aligned_cols=110 Identities=25% Similarity=0.338 Sum_probs=91.5
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
+.|++|+|++|.|+ .+|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 56888888888887 67788888888888888888888887788888888888888888888877778888888888888
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
++|.++...+..|..+++|++|+|++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8888887666678888888888888887753
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.2e-15 Score=150.18 Aligned_cols=133 Identities=18% Similarity=0.184 Sum_probs=86.0
Q ss_pred CCCCCEEEccCCcCC-ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467788888888876 66777777777777777777777754 667777777777777777776666666667777777
Q ss_pred EccCCCCCCCC-chhccCCCCCcEEecccccccCCCC---ccccCCCCCcEEeccCCCCC
Q 002186 203 HLAGNLLNDQI-PAELGMLKTVTHMEIGYNFYQGNIP---WQLGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 203 ~L~~N~l~~~~-p~~l~~l~~L~~L~l~~n~l~g~~p---~~~~~l~~L~~L~Ls~n~l~ 258 (955)
+|++|.+++.. +..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 77777776532 2455555555555555555554333 24444555555555554443
No 383
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=5.5e-15 Score=148.88 Aligned_cols=126 Identities=23% Similarity=0.316 Sum_probs=105.1
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l 185 (955)
+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|..+++|++|||++|.+++..+..|.++++|++|+|++|.+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 455556665 4565543 68999999999998 6778999999999999999999988888899999999999999999
Q ss_pred cccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC
Q 002186 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG 235 (955)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g 235 (955)
++..|..|.++++|++|+|++|.++...+..+..+++|+.|++++|.+..
T Consensus 91 ~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 98888889999999999999999987666667777777777777776553
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=9.2e-16 Score=147.79 Aligned_cols=128 Identities=19% Similarity=0.239 Sum_probs=93.6
Q ss_pred CCCCCEEEccCCcCC-ccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEE
Q 002186 124 LTSLISLDISRNNFS-GHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFL 202 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 202 (955)
.++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..++++++|++|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 467888888888887 77788888888888888888888765 667788888888888888877677777778888888
Q ss_pred EccCCCCCCC-CchhccCCCCCcEEecccccccCCCC---ccccCCCCCcEEecc
Q 002186 203 HLAGNLLNDQ-IPAELGMLKTVTHMEIGYNFYQGNIP---WQLGNMSEVQYLDIA 253 (955)
Q Consensus 203 ~L~~N~l~~~-~p~~l~~l~~L~~L~l~~n~l~g~~p---~~~~~l~~L~~L~Ls 253 (955)
++++|.+++. .|..++.+++|++|++++|.+++..+ ..+..+++|++||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888887653 33566666666666666666665444 345556666666554
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=7.8e-15 Score=145.78 Aligned_cols=133 Identities=17% Similarity=0.211 Sum_probs=103.3
Q ss_pred CcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecC
Q 002186 103 LVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAG 182 (955)
Q Consensus 103 L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~ 182 (955)
.+.+++++|+++. +|..+. ++|++|++++|++++..+..|+.+++|++|+|++|.+++..+..+.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3568888888874 554443 6889999999999877777788899999999999998876666778888999999999
Q ss_pred CCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCC
Q 002186 183 SYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIP 238 (955)
Q Consensus 183 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p 238 (955)
|.+++..+..|.++++|++|+|++|.+++..+..+..+++|++|++++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 98887777778888888888888888876555555666667777666666655443
No 386
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.58 E-value=3.6e-16 Score=171.43 Aligned_cols=136 Identities=9% Similarity=0.022 Sum_probs=97.4
Q ss_pred cccchhhhccCCCCCceEEEeCCCCcEEEEEEeecccc---------------hHHH--------HHHHHHHHhccCCCC
Q 002186 691 FNSTECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT---------------RIKI--------VSEFITRIGTVRHKN 747 (955)
Q Consensus 691 ~~~~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~---------------~~~~--------~~~e~~~l~~l~H~n 747 (955)
.-|.....||+|++|.||+|..++|+.||||+++.... .... ..+|...|.++.+..
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33557889999999999999999999999998753210 0111 234556666664443
Q ss_pred ceeEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCCCeeeCCCCC--
Q 002186 748 LIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKASNIVFDENME-- 825 (955)
Q Consensus 748 iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~~NiLl~~~~~-- 825 (955)
+.-..-+... ..+|||||+++++|.++... .....++.|++.|+.|||+. +||||||||.|||++.++.
T Consensus 175 v~vp~p~~~~--~~~LVME~i~G~~L~~l~~~----~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 175 FPVPEPIAQS--RHTIVMSLVDALPMRQVSSV----PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp CSCCCEEEEE--TTEEEEECCSCEEGGGCCCC----SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSS
T ss_pred CCCCeeeecc--CceEEEEecCCccHhhhccc----HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCcc
Confidence 3211111111 23799999999888765432 22346789999999999998 9999999999999987763
Q ss_pred --------ceECcccccc
Q 002186 826 --------PHLAEFGFKY 835 (955)
Q Consensus 826 --------~ki~DfGl~~ 835 (955)
+.|+||+-+.
T Consensus 246 d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp CTTSEEEEEEECCCTTCE
T ss_pred cccccccceEEEEeCCcc
Confidence 7899999653
No 387
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.54 E-value=1.8e-14 Score=158.66 Aligned_cols=240 Identities=14% Similarity=0.067 Sum_probs=164.0
Q ss_pred CCCCcEEECCCCcCc--ccCCccccCCCCCCEEEccCCcCCccCCccccC--------CCCCcEEeCCCCCCCCCCchhh
Q 002186 100 FNELVDLNLSHNSFS--GQFPVEIFNLTSLISLDISRNNFSGHFPGGIQS--------LRNLLVLDAFSNSFSGSVPAEI 169 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L~~LdL~~N~l~~~~p~~~ 169 (955)
+++|+.|||++|++. ...+..+ +.++.+++..|.+ .+..|.+ +++|+.|+|.+ .++..-+.+|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF 120 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAF 120 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccccccccCCCcEEECCc-cccchhHHHh
Confidence 678999999999987 2222222 2244555555432 2334555 77777777776 6665555667
Q ss_pred cCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCC----CCCCCchhccC--------------------------
Q 002186 170 SQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNL----LNDQIPAELGM-------------------------- 219 (955)
Q Consensus 170 ~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~l~~-------------------------- 219 (955)
.++++|+.|++++|.+....+..|.++.++..+.+..+. ....-+..+..
T Consensus 121 ~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~ 200 (329)
T 3sb4_A 121 KGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQ 200 (329)
T ss_dssp TTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCC
T ss_pred hcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccC
Confidence 777777777777777665666667666666666554421 11111122222
Q ss_pred CCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccC-EE
Q 002186 220 LKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLK-SL 298 (955)
Q Consensus 220 l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L 298 (955)
..++..+.+.++............+++|+.+++++|+++...+..|.++++|++|++.+| +....+..|.++++|+ .+
T Consensus 201 ~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 201 PRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp GGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 233344444333111111111123789999999999998776778999999999999998 8877788999999999 99
Q ss_pred EccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEc
Q 002186 299 DLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFI 348 (955)
Q Consensus 299 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 348 (955)
++.+ .++...+.+|.++++|+.++++.|+++..-+..|.++++|+.++.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9998 787777899999999999999999999777889999999999864
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=1.4e-16 Score=161.61 Aligned_cols=134 Identities=15% Similarity=0.191 Sum_probs=94.0
Q ss_pred CCCCcEEECCCCcCcccCCc------cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCC
Q 002186 100 FNELVDLNLSHNSFSGQFPV------EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE 173 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~ 173 (955)
...++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+..+++|++|++++|.++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34566667777777776665 77778888888888888776 55 7777788888888888777 5676777777
Q ss_pred cceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCc-hhccCCCCCcEEecccccccCCCC
Q 002186 174 HLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIP-AELGMLKTVTHMEIGYNFYQGNIP 238 (955)
Q Consensus 174 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~l~~n~l~g~~p 238 (955)
+|++|+|++|.+++ +| .++.+++|++|++++|.+++..+ ..+..+++|++|++++|.+.+.+|
T Consensus 94 ~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 157 (198)
T 1ds9_A 94 TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYK 157 (198)
T ss_dssp HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHH
T ss_pred cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccc
Confidence 78888888887775 34 57777777778877777764322 356666666666666666655444
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.48 E-value=1.2e-12 Score=147.36 Aligned_cols=263 Identities=8% Similarity=0.025 Sum_probs=153.7
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
...++.+.+.+ .++.+-+.+|.+. +|+.++|..| +..+-..+|.+. +|+.+++.. .++..-+.+|.++++|+.++
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 35566666654 4555556667764 6888888766 666666677773 688888875 56655566788888888888
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
|+.|.++......|. .++|+.+.|..+ ++..-...|..+++|+.+++..| +...-...+.+ .+|+.+++ .++++.
T Consensus 187 l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~ 261 (401)
T 4fdw_A 187 LSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTN 261 (401)
T ss_dssp CTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCE
T ss_pred cCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccE
Confidence 888877755555555 578888888744 55555566777777777777654 22112223333 55666666 333443
Q ss_pred CCCccccCCCCCCEEEecccccc-----ccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCc
Q 002186 260 SIPKELSNLTKLESLFLFRNQLA-----GQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVP 334 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 334 (955)
.-...|.++++|+.+++.+|.+. ...+..|.++++|+.++|. +.++.....+|.++++|+.+.+..| ++..-+
T Consensus 262 I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~ 339 (401)
T 4fdw_A 262 IASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINF 339 (401)
T ss_dssp ECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECT
T ss_pred EChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcH
Confidence 33455666666666666655543 2334456666666666665 3354444555666666666666433 333334
Q ss_pred cccCCCCCccEEEccCCcCcccCCcccCCCC-CCCeeecCCC
Q 002186 335 ESLVQLPSLEILFIWNNYFSGSLPENLGRNS-KLRWVDVSTN 375 (955)
Q Consensus 335 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~-~L~~L~ls~N 375 (955)
..|.++ +|+.+++.+|.+....+..|..++ .++.+.+..+
T Consensus 340 ~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 340 SAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp TSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred HhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 455555 566666655555443334444442 3444444443
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.48 E-value=4.9e-14 Score=139.81 Aligned_cols=104 Identities=20% Similarity=0.171 Sum_probs=44.0
Q ss_pred CCCcEEECCCCcCcccCCccccCCC-CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLT-SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..|+.+++|++|+|++|.+++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 344445555554442 222 22222 444444444444433 3344444444444444444433222234444444444
Q ss_pred ecCCCCcccCCC--CcCCCCCCcEEEccCCCC
Q 002186 180 LAGSYFSGPIPS--QFGSFKSLEFLHLAGNLL 209 (955)
Q Consensus 180 Ls~n~l~~~~p~--~~~~l~~L~~L~L~~N~l 209 (955)
|++|.++ .+|. .+..+++|++|++++|.+
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i 125 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPV 125 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGG
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCC
Confidence 4444443 2232 344444444444444444
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.47 E-value=8e-14 Score=138.28 Aligned_cols=134 Identities=18% Similarity=0.123 Sum_probs=110.8
Q ss_pred ccccCCCCCCEEEccCCcCCccCCccccCC-CCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCC
Q 002186 119 VEIFNLTSLISLDISRNNFSGHFPGGIQSL-RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK 197 (955)
Q Consensus 119 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~ 197 (955)
..+.++++|++|++++|+++. +|. +..+ ++|++|||++|.+++. ..+..+++|++|+|++|.+++..|..|+.++
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 356788999999999999985 454 4444 4999999999999875 6788999999999999999876555568999
Q ss_pred CCcEEEccCCCCCCCCch--hccCCCCCcEEecccccccCCCCcc----ccCCCCCcEEeccCCCCC
Q 002186 198 SLEFLHLAGNLLNDQIPA--ELGMLKTVTHMEIGYNFYQGNIPWQ----LGNMSEVQYLDIAGANLS 258 (955)
Q Consensus 198 ~L~~L~L~~N~l~~~~p~--~l~~l~~L~~L~l~~n~l~g~~p~~----~~~l~~L~~L~Ls~n~l~ 258 (955)
+|++|+|++|.++ .+|. .+..+++|+.|++++|.+.. +|.. +..+++|++||+++|...
T Consensus 89 ~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 89 DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999999999995 4665 78899999999999999874 5553 888999999999988754
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=2.7e-13 Score=133.50 Aligned_cols=104 Identities=23% Similarity=0.254 Sum_probs=66.2
Q ss_pred EECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCC
Q 002186 106 LNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYF 185 (955)
Q Consensus 106 L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l 185 (955)
+++++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|++|||++|++++..+..|.++++|++|+|++|.+
T Consensus 14 l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l 90 (170)
T 3g39_A 14 VDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL 90 (170)
T ss_dssp EECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred EEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCcc
Confidence 4444444442 444332 5666666666666666666666666666666666666655555566677777777777777
Q ss_pred cccCCCCcCCCCCCcEEEccCCCCCCC
Q 002186 186 SGPIPSQFGSFKSLEFLHLAGNLLNDQ 212 (955)
Q Consensus 186 ~~~~p~~~~~l~~L~~L~L~~N~l~~~ 212 (955)
++..+..|.++++|++|+|++|.++..
T Consensus 91 ~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 91 KSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 665555677777777777777776543
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=3e-16 Score=159.18 Aligned_cols=150 Identities=21% Similarity=0.312 Sum_probs=91.9
Q ss_pred ccCCCCCCEEEccCCcCCccCCc------cccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcC
Q 002186 121 IFNLTSLISLDISRNNFSGHFPG------GIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFG 194 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~ 194 (955)
+.....++.++++.+.++|.+|. .|..+++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45566777778888877777765 66677777777777777665 55 6666677777777777666 4555555
Q ss_pred CCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCC-ccccCCCCCCE
Q 002186 195 SFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIP-KELSNLTKLES 273 (955)
Q Consensus 195 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p-~~l~~l~~L~~ 273 (955)
.+++|++|+|++|.+++ +| .+..+ ++|++|++++|.+++..+ ..+..+++|++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l------------------------~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~ 144 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKL------------------------VNLRVLYMSNNKITNWGEIDKLAALDKLED 144 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHH------------------------HHSSEEEESEEECCCHHHHHHHTTTTTCSE
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccC------------------------CCCCEEECCCCcCCchhHHHHHhcCCCCCE
Confidence 56666666666666654 23 34444 445555555555543211 24555666666
Q ss_pred EEeccccccccCCcc----------CcCCCccCEEE
Q 002186 274 LFLFRNQLAGQVPWE----------FSRVTTLKSLD 299 (955)
Q Consensus 274 L~L~~N~l~~~~p~~----------~~~l~~L~~L~ 299 (955)
|++++|.+.+..|.. +..+++|+.||
T Consensus 145 L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld 180 (198)
T 1ds9_A 145 LLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD 180 (198)
T ss_dssp EEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC
T ss_pred EEecCCccccccccccchHHHHHHHHHhCCCcEEEC
Confidence 666666665554432 55566666665
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.44 E-value=2.6e-12 Score=144.55 Aligned_cols=243 Identities=9% Similarity=0.047 Sum_probs=198.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
..|+.++|..| ++.+-..+|.+ .+|+.+++.. .+..+-+.+|.++++|+.++|+.|.++......|. ..+|+.+.|
T Consensus 135 ~~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~l 210 (401)
T 4fdw_A 135 SQIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLL 210 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEEC
T ss_pred CCccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEe
Confidence 47999999876 77677778888 4799999986 67777788999999999999999999865555666 689999999
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCC--
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLS-- 258 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~-- 258 (955)
..+ ++..-...|.++++|+.+++..| ++..-...|.. .+|+.+.+.. .+...-+..+.++++|+.+++.+|.+.
T Consensus 211 p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~-~i~~I~~~aF~~c~~L~~l~l~~~~~~~~ 286 (401)
T 4fdw_A 211 PVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN-GVTNIASRAFYYCPELAEVTTYGSTFNDD 286 (401)
T ss_dssp CTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET-TCCEECTTTTTTCTTCCEEEEESSCCCCC
T ss_pred CCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC-CccEEChhHhhCCCCCCEEEeCCccccCC
Confidence 854 77667788999999999999875 55555556766 8899999954 444444667889999999999988765
Q ss_pred ---CCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCcc
Q 002186 259 ---GSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPE 335 (955)
Q Consensus 259 ---~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 335 (955)
...+..|.++++|+.+.+. +.++..-...|.++++|+.++|..| ++..-+.+|.++ +|+.++++.|.+....+.
T Consensus 287 ~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 287 PEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp TTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 3445678999999999999 5587777889999999999999665 766677899999 999999999998877777
Q ss_pred ccCCCC-CccEEEccCCcCc
Q 002186 336 SLVQLP-SLEILFIWNNYFS 354 (955)
Q Consensus 336 ~l~~l~-~L~~L~L~~N~l~ 354 (955)
.|..++ +++.|++..+.+.
T Consensus 364 ~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 364 VWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SCCCSCTTCCEEEECGGGHH
T ss_pred cccCCCCCccEEEeCHHHHH
Confidence 788875 7889998876543
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=4.7e-13 Score=132.18 Aligned_cols=104 Identities=23% Similarity=0.222 Sum_probs=74.5
Q ss_pred EEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC
Q 002186 105 DLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY 184 (955)
Q Consensus 105 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~ 184 (955)
.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|+.+++|++|+|++|++++..+..|.++++|++|+|++|.
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 4566666664 4555553 677777777777777777777777777777777777776555556777778888888887
Q ss_pred CcccCCCCcCCCCCCcEEEccCCCCCC
Q 002186 185 FSGPIPSQFGSFKSLEFLHLAGNLLND 211 (955)
Q Consensus 185 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 211 (955)
+++..+..|..+++|++|+|++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 776555567778888888888887764
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=1.9e-12 Score=127.41 Aligned_cols=107 Identities=22% Similarity=0.280 Sum_probs=83.8
Q ss_pred CCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccC
Q 002186 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAG 206 (955)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~ 206 (955)
.+++++++|.++. +|..+ .++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4688899988875 56555 37888888888888887788888888888888888888877777788888888888888
Q ss_pred CCCCCCCchhccCCCCCcEEecccccccCC
Q 002186 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGN 236 (955)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~ 236 (955)
|++++..+..+..+++|++|++++|.+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 888876666677777777777777666543
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=3.8e-12 Score=125.67 Aligned_cols=104 Identities=19% Similarity=0.235 Sum_probs=80.5
Q ss_pred CEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCC
Q 002186 128 ISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N 207 (955)
+.+++++|.+. .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888885 5666554 78888888888888877888888888888888888888766666788888888888888
Q ss_pred CCCCCCchhccCCCCCcEEeccccccc
Q 002186 208 LLNDQIPAELGMLKTVTHMEIGYNFYQ 234 (955)
Q Consensus 208 ~l~~~~p~~l~~l~~L~~L~l~~n~l~ 234 (955)
++++..+..+..+++|++|++++|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcc
Confidence 887655555666666666666666554
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=2e-11 Score=135.26 Aligned_cols=93 Identities=18% Similarity=0.133 Sum_probs=59.9
Q ss_pred CCccccCCCCCCEEEccC-CcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCC
Q 002186 117 FPVEIFNLTSLISLDISR-NNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGS 195 (955)
Q Consensus 117 ~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~ 195 (955)
+|. +..+++|++|+|++ |.|++..|..|+.|++|++|||++|+|++..|..|.+|++|++|+|++|.|++..+..|..
T Consensus 24 ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 102 (347)
T 2ifg_A 24 LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQG 102 (347)
T ss_dssp TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCS
T ss_pred cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHccc
Confidence 444 55666666666664 6666666666666666666666666666666666666666667777777666554555555
Q ss_pred CCCCcEEEccCCCCCC
Q 002186 196 FKSLEFLHLAGNLLND 211 (955)
Q Consensus 196 l~~L~~L~L~~N~l~~ 211 (955)
++ |++|+|.+|.+..
T Consensus 103 ~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 103 LS-LQELVLSGNPLHC 117 (347)
T ss_dssp CC-CCEEECCSSCCCC
T ss_pred CC-ceEEEeeCCCccC
Confidence 54 7777777777654
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.25 E-value=5e-10 Score=126.23 Aligned_cols=323 Identities=10% Similarity=0.077 Sum_probs=161.3
Q ss_pred CCCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEE
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLN 179 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~ 179 (955)
..+|+.++|.. .++.+-..+|.++++|+.++|..+ +..+-..+|.++.+|+.+.+..+ +...-..+|.++..++...
T Consensus 70 c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 70 CRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp CTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 34566777753 355455566777777777777644 44444556666777766665433 3323334455554433333
Q ss_pred ecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC
Q 002186 180 LAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG 259 (955)
Q Consensus 180 Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~ 259 (955)
.... ...-...|.++++|+.+.+.++. ...-...|..+.+|+.+.+..+ +...-...+.++..|+.+.+..+...
T Consensus 147 ~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~- 221 (394)
T 4fs7_A 147 PEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY- 221 (394)
T ss_dssp CTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE-
T ss_pred Cccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE-
Confidence 2222 22223456677777777765442 2233344555566666655443 11112233444455554444333221
Q ss_pred CCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCC
Q 002186 260 SIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQ 339 (955)
Q Consensus 260 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 339 (955)
+.+.....++|+.+.+..+ ++..-...|..+..|+.+.+..+... .....|..+..++.+....+.+. ...+..
T Consensus 222 -i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~ 295 (394)
T 4fs7_A 222 -LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYG 295 (394)
T ss_dssp -ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTT
T ss_pred -eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---cccccc
Confidence 1122223345555555422 22223334555555555555544332 33344555555555554433221 123444
Q ss_pred CCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEE
Q 002186 340 LPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLR 419 (955)
Q Consensus 340 l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~ 419 (955)
+.+|+.+.+..+ ++..-...|.++.+|+.+++.+ + ++..-..+|.+|++|+.++
T Consensus 296 ~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~------------------------~-v~~I~~~aF~~c~~L~~i~ 349 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY------------------------L-VEEIGKRSFRGCTSLSNIN 349 (394)
T ss_dssp CTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCT------------------------T-CCEECTTTTTTCTTCCEEC
T ss_pred cccccccccccc-cceechhhhcCCCCCCEEEeCC------------------------c-ccEEhHHhccCCCCCCEEE
Confidence 555555555432 3322233444445555544432 2 3323345677788888888
Q ss_pred CcCCccccccchhccCCCCCCEEECCCCcCCCCCCcchhhccCCcc
Q 002186 420 LEDNSFSGEIPLKFSQLPDINYIDLSRNGFTGGIPTDINQASKLEY 465 (955)
Q Consensus 420 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~ 465 (955)
+..| ++..-..+|.++++|+.+++..+ +. .+...|.++++|+.
T Consensus 350 lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 350 FPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred ECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 8766 55455567888888888887654 22 23445666666654
No 400
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.24 E-value=1.8e-10 Score=130.00 Aligned_cols=334 Identities=11% Similarity=0.013 Sum_probs=189.3
Q ss_pred CcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCC
Q 002186 113 FSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQ 192 (955)
Q Consensus 113 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~ 192 (955)
++.+-..+|.++++|+.+.|..+ ++.+-..+|.++++|+.+++..+ ++..-..+|.++.+|+.+.+..+ +...-...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeeccee
Confidence 34445567888888999988744 66666677888888888888754 55444566777888887766543 33344455
Q ss_pred cCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCC
Q 002186 193 FGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLE 272 (955)
Q Consensus 193 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~ 272 (955)
|.++..++....... ...-...|..+++|+.+.+..+. ...-...|.++++|+
T Consensus 136 F~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-------------------------~~I~~~~F~~c~~L~ 188 (394)
T 4fs7_A 136 FKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-------------------------ETLHNGLFSGCGKLK 188 (394)
T ss_dssp TTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-------------------------CEECTTTTTTCTTCC
T ss_pred eecccccccccCccc--cccchhhhcccCCCcEEecCCcc-------------------------ceeccccccCCCCce
Confidence 666554443333222 11222344555555555554321 111222344445555
Q ss_pred EEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCc
Q 002186 273 SLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNY 352 (955)
Q Consensus 273 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~ 352 (955)
.+.+..| ++......|.++..|+.+.+..+... +.+.+....+|+.+.+..+ ++..-...+..+..|+.+.+..+.
T Consensus 189 ~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~ 264 (394)
T 4fs7_A 189 SIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNK 264 (394)
T ss_dssp BCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTT
T ss_pred EEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCc
Confidence 5555433 33333344555555555554443322 1222233344555554322 111122344455555555555443
Q ss_pred CcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchh
Q 002186 353 FSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLK 432 (955)
Q Consensus 353 l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 432 (955)
.. .....+..+..++.+....+.+. ...+.....|+.+.+..+ +...-...|.+|++|+.++|.++ ++..-..+
T Consensus 265 ~~-i~~~~F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~a 338 (394)
T 4fs7_A 265 LR-IGGSLFYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRS 338 (394)
T ss_dssp CE-ECSCTTTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTT
T ss_pred ce-eeccccccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHh
Confidence 22 33344555555665555544321 112334455666665443 44344567889999999999755 66555678
Q ss_pred ccCCCCCCEEECCCCcCCCCCCcchhhccCCcccccCCCCCCCCCCCcccCCCCcccc
Q 002186 433 FSQLPDINYIDLSRNGFTGGIPTDINQASKLEYFNVSNNPKLGGMIPAQTWSLPSLQN 490 (955)
Q Consensus 433 ~~~l~~L~~L~Ls~N~l~~~ip~~~~~~~~L~~L~ls~N~~l~~~~p~~~~~l~~L~~ 490 (955)
|.++.+|+.+++..| ++..-...|.++.+|+.+++..+-. .+...+..+++|+.
T Consensus 339 F~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~~~---~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 339 FRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKRLE---QYRYDFEDTTKFKW 392 (394)
T ss_dssp TTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGGGG---GGGGGBCTTCEEEE
T ss_pred ccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCCCE---EhhheecCCCCCcE
Confidence 999999999999877 6644456799999999999987622 22345666666654
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.23 E-value=2e-11 Score=135.39 Aligned_cols=110 Identities=18% Similarity=0.211 Sum_probs=91.2
Q ss_pred CccccceeecCCCCcEEEEEcCCCCCCccCCCCcchhcCCCCcEEECCC-CcCcccCCccccCCCCCCEEEccCCcCCcc
Q 002186 62 ACSWSGVKCNKNNTIVVGINLSMKGLSGALPGKPLRIFFNELVDLNLSH-NSFSGQFPVEIFNLTSLISLDISRNNFSGH 140 (955)
Q Consensus 62 ~c~w~gv~C~~~~~~v~~l~l~~~~l~g~~~~~~~~~~l~~L~~L~Ls~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 140 (955)
.|.|..|.|+..+ ++.+ +|. +.. +.+|+.|+|++ |.|++..|..|.+|++|++|+|++|+|++.
T Consensus 7 ~C~~~~v~~~~~n-----------~l~~-ip~-l~~--~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 71 (347)
T 2ifg_A 7 PHGSSGLRCTRDG-----------ALDS-LHH-LPG--AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFV 71 (347)
T ss_dssp CSSSSCEECCSSC-----------CCTT-TTT-SCS--CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEE
T ss_pred cccCCEEEcCCCC-----------CCCc-cCC-CCC--CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcccee
Confidence 3888888887521 2332 565 544 77899999996 999988888999999999999999999999
Q ss_pred CCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcc
Q 002186 141 FPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSG 187 (955)
Q Consensus 141 ~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~ 187 (955)
.|..|.+|++|++|||++|+|++..+..+..+. |++|+|++|.+..
T Consensus 72 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 72 APDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 999999999999999999999976666666666 9999999998874
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=1.4e-12 Score=145.35 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=86.1
Q ss_pred CCCCcEEECCCCcCcccCCccccC-----CCCCCEEEccCCcCCccCCccc-cCCCCCcEEeCCCCCCCCCCchhh----
Q 002186 100 FNELVDLNLSHNSFSGQFPVEIFN-----LTSLISLDISRNNFSGHFPGGI-QSLRNLLVLDAFSNSFSGSVPAEI---- 169 (955)
Q Consensus 100 l~~L~~L~Ls~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~LdL~~N~l~~~~p~~~---- 169 (955)
.+.|+.|+|++|.++......+.. .++|++|||++|.++......+ ..+++|++|||++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 356777777777776543333322 2567777777777654322222 234566667777766654333332
Q ss_pred -cCCCcceEEEecCCCCcc----cCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCC
Q 002186 170 -SQLEHLKVLNLAGSYFSG----PIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNM 244 (955)
Q Consensus 170 -~~L~~L~~L~Ls~n~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l 244 (955)
...++|++|+|++|.++. .++..+..+++|++|+|++|.+++.-.. .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~--------------------~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE--------------------LLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH--------------------HHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH--------------------HHHHHHhcC
Confidence 234566666666666643 1233344556666666666665431100 112233444
Q ss_pred CCCcEEeccCCCCCCC----CCccccCCCCCCEEEeccccccc
Q 002186 245 SEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLAG 283 (955)
Q Consensus 245 ~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~~ 283 (955)
++|++|+|++|.++.. +...+...++|++|+|++|.++.
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 5555666666655431 22233345666667776666654
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.11 E-value=2e-12 Score=143.95 Aligned_cols=170 Identities=16% Similarity=0.084 Sum_probs=104.9
Q ss_pred CCCCCEEEccCCcCCccCCccccC-----CCCCcEEeCCCCCCCCCCchhh-cCCCcceEEEecCCCCcccCCCCc----
Q 002186 124 LTSLISLDISRNNFSGHFPGGIQS-----LRNLLVLDAFSNSFSGSVPAEI-SQLEHLKVLNLAGSYFSGPIPSQF---- 193 (955)
Q Consensus 124 l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~LdL~~N~l~~~~p~~~-~~L~~L~~L~Ls~n~l~~~~p~~~---- 193 (955)
+++|++|+|++|.++......+.. .++|++|||++|.++......+ ..+++|++|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 457788888888876543333322 2577777777777654322222 234567777777776654332222
Q ss_pred -CCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCC----CCCccccCC
Q 002186 194 -GSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSG----SIPKELSNL 268 (955)
Q Consensus 194 -~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~----~~p~~l~~l 268 (955)
...++|++|+|++|.++..-.. .++..+..+++|++|+|++|.++. .++..+...
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~--------------------~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~ 210 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVA--------------------VLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRN 210 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHH--------------------HHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGC
T ss_pred HhcCCccceeeCCCCCCChHHHH--------------------HHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcC
Confidence 2345666666666665421111 123334556677777777777653 234556778
Q ss_pred CCCCEEEeccccccccC----CccCcCCCccCEEEccCCCCCCCCCccc
Q 002186 269 TKLESLFLFRNQLAGQV----PWEFSRVTTLKSLDLSDNRLSGPIPESF 313 (955)
Q Consensus 269 ~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 313 (955)
++|++|+|++|.++..- +..+...++|++|+|++|.|+......+
T Consensus 211 ~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 211 RQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp SCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred CCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 89999999999997532 2334567899999999999975443333
No 404
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.05 E-value=3.4e-10 Score=119.99 Aligned_cols=137 Identities=17% Similarity=0.056 Sum_probs=106.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc-chHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGN 772 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gs 772 (955)
.....+.|+.+.||++... |..+++|...... .....+.+|++.++.+. |..+.++++++.+.+..|+||||++|.+
T Consensus 18 ~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 96 (263)
T 3tm0_A 18 CVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVL 96 (263)
T ss_dssp EEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEE
T ss_pred eEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCee
Confidence 4556777888899999864 6789999986422 22345778888888874 6778889999998889999999999999
Q ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCC------------------------------------------------
Q 002186 773 LSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC------------------------------------------------ 804 (955)
Q Consensus 773 L~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~------------------------------------------------ 804 (955)
|.+.+... .....++.+++++++.||+..
T Consensus 97 l~~~~~~~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (263)
T 3tm0_A 97 CSEEYEDE---QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDF 173 (263)
T ss_dssp HHHHCCTT---TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHH
T ss_pred hhhccCCc---ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHH
Confidence 98764221 234578889999999999810
Q ss_pred --------CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 805 --------YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 805 --------~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+.++|+|+++.||+++++..+.|.||+.+.
T Consensus 174 l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 174 LKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876556799999763
No 405
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=4.1e-10 Score=119.12 Aligned_cols=128 Identities=16% Similarity=0.102 Sum_probs=97.4
Q ss_pred cCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCc--eeEeEEEEcCCeeEEEEeecCCCChhHHh
Q 002186 700 ARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL--IRLLGFCYNRHQAYLLYDYLPNGNLSEKI 777 (955)
Q Consensus 700 g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni--v~l~g~~~~~~~~~lv~ey~~~gsL~~~l 777 (955)
+.|..+.||++...+|..++||..... ....+.+|++.++.+++.++ .+++++....+..++||||++|.++. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355568999999888889999997643 22456778888888865554 45888888878899999999998884 2
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------------------
Q 002186 778 RTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------------------- 804 (955)
Q Consensus 778 ~~~~~~~~~~~i~~~ia~gl~~lH~~~----------------------------------------------------- 804 (955)
. ..+ +..++.++++.++.||+..
T Consensus 105 ~-~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 180 (264)
T 1nd4_A 105 S-HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPD 180 (264)
T ss_dssp S-CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCS
T ss_pred C-cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCC
Confidence 2 122 2367788888888888742
Q ss_pred --CCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 805 --YPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 805 --~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+.++|+|++|.||+++++..++|.|||.+.
T Consensus 181 ~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 181 GEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp SCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999877667799999864
No 406
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.91 E-value=2.7e-09 Score=118.67 Aligned_cols=141 Identities=15% Similarity=0.214 Sum_probs=106.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEee--ccc--chHHHHHHHHHHHhccC--CCCceeEeEEEEcC---CeeEEEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIE--WGA--TRIKIVSEFITRIGTVR--HKNLIRLLGFCYNR---HQAYLLY 765 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~--~~~--~~~~~~~~e~~~l~~l~--H~niv~l~g~~~~~---~~~~lv~ 765 (955)
..+.++.|.++.||+....+ ..+++|+.. .+. .....+.+|+++++.++ +..+.++++++.+. +..|+||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 45567899999999998765 567888775 332 22446778899988887 45678899998776 4589999
Q ss_pred eecCCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCC-----------------------------------------
Q 002186 766 DYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDC----------------------------------------- 804 (955)
Q Consensus 766 ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~----------------------------------------- 804 (955)
||++|..+.+......+..++..++.++++.|+.||+..
T Consensus 121 e~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (359)
T 3dxp_A 121 EFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSL 200 (359)
T ss_dssp ECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHH
T ss_pred EecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHH
Confidence 999998886544445677888899999999999999731
Q ss_pred --------------CCCcccCCCCCCCeeeCCCCC--ceECccccccc
Q 002186 805 --------------YPAIPHGDLKASNIVFDENME--PHLAEFGFKYL 836 (955)
Q Consensus 805 --------------~~~iiHrdlk~~NiLl~~~~~--~ki~DfGl~~~ 836 (955)
.+.++|+|+++.||+++.++. +.|.||+.+..
T Consensus 201 ~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 201 MDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999997753 68999998753
No 407
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.90 E-value=1.6e-07 Score=105.68 Aligned_cols=124 Identities=13% Similarity=0.115 Sum_probs=81.2
Q ss_pred CCcEEECCCCcCcccCCccccCCCCCCEEEccCCc---CCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEE
Q 002186 102 ELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNN---FSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVL 178 (955)
Q Consensus 102 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L 178 (955)
.|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+-..+|..+.+|+.+.+..+ ++......|..+.+|+.+
T Consensus 65 ~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i 142 (394)
T 4gt6_A 65 VLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTV 142 (394)
T ss_dssp CCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEE
T ss_pred cCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccc
Confidence 4777777654 665667788888888888887764 55455667888888888776544 443445567788888888
Q ss_pred EecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEeccc
Q 002186 179 NLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGY 230 (955)
Q Consensus 179 ~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~ 230 (955)
.+..+ +.......|.++.+|+.+.+..+ ++..-...|. -..|+.+.+..
T Consensus 143 ~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~~i~ip~ 191 (394)
T 4gt6_A 143 TIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALTQIHIPA 191 (394)
T ss_dssp ECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCSEEEECT
T ss_pred cccce-eeeecccceecccccccccccce-eeEecccccc-ccceeEEEECC
Confidence 88644 34344566778888888888654 3322222332 24566665543
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.86 E-value=1.4e-11 Score=128.81 Aligned_cols=142 Identities=20% Similarity=0.216 Sum_probs=75.8
Q ss_pred CCccccceeecCCCCcEEEEEcCC---CCCCccCCCCcc-h-------hcCCCCcEEECCCCcCcccCCccccCCCCCCE
Q 002186 61 YACSWSGVKCNKNNTIVVGINLSM---KGLSGALPGKPL-R-------IFFNELVDLNLSHNSFSGQFPVEIFNLTSLIS 129 (955)
Q Consensus 61 ~~c~w~gv~C~~~~~~v~~l~l~~---~~l~g~~~~~~~-~-------~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (955)
..|+|.|+.|+..+.+|+.+-..+ ..+.|.+.+... . -+-..-+.|||+. |...+.|+.
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~----------l~~dp~L~~ 145 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKG----------LRSDPDLVA 145 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTT----------GGGCHHHHH
T ss_pred HHHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHH----------cCCCcchhh
Confidence 358999999997655654433322 223344443211 0 0011233444432 333344444
Q ss_pred --EEccCCcCC---ccCCccccCCCCCcEEeCCCCCCCC--CCchhhcCCCcceEEEecCCCCcccCCCCcCCCC--CCc
Q 002186 130 --LDISRNNFS---GHFPGGIQSLRNLLVLDAFSNSFSG--SVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFK--SLE 200 (955)
Q Consensus 130 --L~Ls~N~l~---~~~p~~~~~l~~L~~LdL~~N~l~~--~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~--~L~ 200 (955)
++++.|... +.++....++++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++. ..+..++ +|+
T Consensus 146 ~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~ 223 (267)
T 3rw6_A 146 QNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLE 223 (267)
T ss_dssp TTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCS
T ss_pred cCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcc
Confidence 555666322 2122222456677777777777776 3445666777777777777777654 2233333 677
Q ss_pred EEEccCCCCCCCCc
Q 002186 201 FLHLAGNLLNDQIP 214 (955)
Q Consensus 201 ~L~L~~N~l~~~~p 214 (955)
+|+|++|.+.+.+|
T Consensus 224 ~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 224 ELWLDGNSLCDTFR 237 (267)
T ss_dssp EEECTTSTTGGGCS
T ss_pred eEEccCCcCccccC
Confidence 77777777765544
No 409
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.82 E-value=1.6e-07 Score=105.54 Aligned_cols=77 Identities=14% Similarity=0.186 Sum_probs=34.6
Q ss_pred CcEEeccCCCCCCCCCccccCCCCCCEEEecccc---ccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEe
Q 002186 247 VQYLDIAGANLSGSIPKELSNLTKLESLFLFRNQ---LAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLS 323 (955)
Q Consensus 247 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 323 (955)
|+.+.+..+ ++..-...|.++++|+.+.+..|. ++..-..+|..+.+|+.+.+..+ ++......|..+.+|+.+.
T Consensus 66 L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~ 143 (394)
T 4gt6_A 66 LTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVT 143 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEE
T ss_pred CEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccccc
Confidence 555555322 332333445555555555555442 33333344555555555444432 2223333445555555555
Q ss_pred cc
Q 002186 324 LM 325 (955)
Q Consensus 324 Ls 325 (955)
+.
T Consensus 144 lp 145 (394)
T 4gt6_A 144 IP 145 (394)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.73 E-value=1.8e-09 Score=118.94 Aligned_cols=202 Identities=17% Similarity=0.211 Sum_probs=103.6
Q ss_pred CcEEEEEcCCCCCCc-cC-------CCCcchhcCCCCcEEECCCCcCc---------ccCCccccCCCCCCEEEccCCcC
Q 002186 75 TIVVGINLSMKGLSG-AL-------PGKPLRIFFNELVDLNLSHNSFS---------GQFPVEIFNLTSLISLDISRNNF 137 (955)
Q Consensus 75 ~~v~~l~l~~~~l~g-~~-------~~~~~~~~l~~L~~L~Ls~n~l~---------~~~p~~~~~l~~L~~L~Ls~N~l 137 (955)
.+|+.+.+...+..| .. ..+..+ +++|+.|.+..+... +.++..+..+++|+.|+|++|.-
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~--l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~ 184 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEK--FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNN 184 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHH--HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBT
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhh--cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCC
Confidence 356677776655553 11 122223 678888888655331 12334456677888888877631
Q ss_pred CccCCccccCCCCCcEEeCCCCCCCCCCchhhc--CCCcceEEEecC--CCCccc-----CCCCc--CCCCCCcEEEccC
Q 002186 138 SGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEIS--QLEHLKVLNLAG--SYFSGP-----IPSQF--GSFKSLEFLHLAG 206 (955)
Q Consensus 138 ~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~--~L~~L~~L~Ls~--n~l~~~-----~p~~~--~~l~~L~~L~L~~ 206 (955)
. .++. +. +++|++|+|..+.++......+. .+++|++|+|+. |...+. +...+ ..+++|++|+|.+
T Consensus 185 l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 185 L-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp C-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred c-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 1 2232 33 67778887777766543333333 677777777753 111111 01111 2356666666666
Q ss_pred CCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCC----CCccccCCCCCCEEEecccccc
Q 002186 207 NLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGS----IPKELSNLTKLESLFLFRNQLA 282 (955)
Q Consensus 207 N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~----~p~~l~~l~~L~~L~L~~N~l~ 282 (955)
|.+.+..+..+.. ...+++|++|+|+.|.+.+. ++..+.++++|+.|+|+.|.++
T Consensus 262 ~~i~~~~~~~la~---------------------a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 262 AEEQNVVVEMFLE---------------------SDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp CTTHHHHHHHHHH---------------------CSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCchHHHHHHHh---------------------CccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6554322222210 01345666666666655532 2223344567777777777665
Q ss_pred ccCCccCcC-CCccCEEEccCCC
Q 002186 283 GQVPWEFSR-VTTLKSLDLSDNR 304 (955)
Q Consensus 283 ~~~p~~~~~-l~~L~~L~Ls~N~ 304 (955)
...-..+.. + ...++++.++
T Consensus 321 d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 321 DEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHHHc--CCEEEecCCc
Confidence 332212221 1 2456777665
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.67 E-value=3.9e-09 Score=116.32 Aligned_cols=164 Identities=15% Similarity=0.193 Sum_probs=86.1
Q ss_pred CchhhcCCCcceEEEecCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhcc--CCCCCcEEeccc--ccccCCCCcc
Q 002186 165 VPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELG--MLKTVTHMEIGY--NFYQGNIPWQ 240 (955)
Q Consensus 165 ~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~--~l~~L~~L~l~~--n~l~g~~p~~ 240 (955)
++..+..+++|+.|+|++|.-. .++. +. +++|++|+|..+.++......+. .+++|++|+|+. |...+...
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~-- 238 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGD-- 238 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSC--
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchh--
Confidence 4455667778888888776311 2233 32 67788888877766443323333 566666666642 11111100
Q ss_pred ccCCCCCcEEeccCCCCCCCCCccc--cCCCCCCEEEeccccccccCCccC---cCCCccCEEEccCCCCCCC----CCc
Q 002186 241 LGNMSEVQYLDIAGANLSGSIPKEL--SNLTKLESLFLFRNQLAGQVPWEF---SRVTTLKSLDLSDNRLSGP----IPE 311 (955)
Q Consensus 241 ~~~l~~L~~L~Ls~n~l~~~~p~~l--~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~ 311 (955)
+ .. +...+ ..+++|++|+|.+|.+.+..+..+ ..+++|++|+|+.|.+++. ++.
T Consensus 239 ~---~~--------------l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~ 301 (362)
T 2ra8_A 239 M---NV--------------FRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLD 301 (362)
T ss_dssp G---GG--------------TGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHT
T ss_pred H---HH--------------HHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHh
Confidence 0 00 00011 235667777777666654322111 2456777777777777653 233
Q ss_pred ccCCCCCCcEEecccccCCCCCccccCC-CCCccEEEccCCc
Q 002186 312 SFADLKNLRLLSLMYNEMSGTVPESLVQ-LPSLEILFIWNNY 352 (955)
Q Consensus 312 ~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~L~~N~ 352 (955)
.+..+++|+.|++++|.++...-..+.. + ...++++.++
T Consensus 302 ~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 302 HVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp THHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred hcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 3345677888888777765332222221 1 2446777665
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.65 E-value=1.2e-08 Score=110.48 Aligned_cols=187 Identities=13% Similarity=0.085 Sum_probs=120.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC-CCC--ceeEeEEEEcCC---eeEEEEeec
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKN--LIRLLGFCYNRH---QAYLLYDYL 768 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~n--iv~l~g~~~~~~---~~~lv~ey~ 768 (955)
..+.++.|....||+.. ..+++|+-... .....+.+|.+.++.+. |.. +.+.++++...+ ..|+||||+
T Consensus 24 ~i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 24 TIEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eeEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 34557889999999864 45888875422 23456788899988774 333 334554443333 358999999
Q ss_pred CCCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 002186 769 PNGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD--------------------------------------------- 803 (955)
Q Consensus 769 ~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~--------------------------------------------- 803 (955)
+|.++.+.....++..++..++.++++.++.||+.
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 99888765555667777888888888888888861
Q ss_pred ----------CCCCcccCCCCCCCeeeCC--CCCceECcccccccccccCC--CCcccccccCch------hhhhc----
Q 002186 804 ----------CYPAIPHGDLKASNIVFDE--NMEPHLAEFGFKYLTQLADG--SFPAKIAWTESG------EFYNA---- 859 (955)
Q Consensus 804 ----------~~~~iiHrdlk~~NiLl~~--~~~~ki~DfGl~~~~~~~~~--~~~~~~~~~~~~------e~~~~---- 859 (955)
..+.++|+|+++.||+++. ...+.|.||+.+..-..... ........+... +.|..
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~~~ 258 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKDIP 258 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSCHH
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCCcH
Confidence 1145799999999999998 45678999998754321100 000000000000 01100
Q ss_pred ---cCCcccccchhHHHHHHHHHhCCCCCC
Q 002186 860 ---MKEEMYMDVYGFGEIILEILTNGRLTN 886 (955)
Q Consensus 860 ---~~~~~~~DV~S~Gvvl~Elltg~~p~~ 886 (955)
.+.....+.|++|+++|++.+|..++.
T Consensus 259 ~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 259 TVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 011222589999999999999976543
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.45 E-value=2.1e-05 Score=87.76 Aligned_cols=299 Identities=9% Similarity=0.030 Sum_probs=137.7
Q ss_pred CCCcEEECCCCcCcccCCccccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEe
Q 002186 101 NELVDLNLSHNSFSGQFPVEIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNL 180 (955)
Q Consensus 101 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~L 180 (955)
.+|+.+.+.. .++.+-..+|.++++|+.++|..+ ++.+-..+|.+. +|+.+.+..+ ++..-..+|.. .+|+.+.+
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i~l 120 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDFEF 120 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEEEC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccccC
Confidence 3566666653 355555667888888888888644 555555667766 5666665433 33233334444 36777777
Q ss_pred cCCCCcccCCCCcCCCCCCcEEEccCCCCCCCCchhccCCCCCcEEecccccccC------------CCCccccCCCCCc
Q 002186 181 AGSYFSGPIPSQFGSFKSLEFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQG------------NIPWQLGNMSEVQ 248 (955)
Q Consensus 181 s~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g------------~~p~~~~~l~~L~ 248 (955)
..+ ++..-...|.+. +|+...+..+ ++..-...+....+++...+..+.... .....+.....+.
T Consensus 121 p~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGT 197 (379)
T ss_dssp CTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCS
T ss_pred CCc-cccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccccccc
Confidence 654 222223334443 4555554432 332333445555555555544332110 0001111122222
Q ss_pred EEeccCCCCCCCCCccccCCCCCCEEEeccccccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEeccccc
Q 002186 249 YLDIAGANLSGSIPKELSNLTKLESLFLFRNQLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNE 328 (955)
Q Consensus 249 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 328 (955)
...+.... .......+....+|+.+.+..+ +.......|.++..|+.+.+..+ ++......|.++.+|+.+.+..+
T Consensus 198 ~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~- 273 (379)
T 4h09_A 198 EFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK- 273 (379)
T ss_dssp EEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-
T ss_pred ccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-
Confidence 22221111 1111222333444555444322 22233334445555555555443 33333344455555555554322
Q ss_pred CCCCCccccCCCCCccEEEccCCcCcccCCcccCCCCCCCeeecCCCcccccCCCCCCCCCccceeeccCCCCCCCCCcC
Q 002186 329 MSGTVPESLVQLPSLEILFIWNNYFSGSLPENLGRNSKLRWVDVSTNNFNGSIPPDICSGGVLFKLILFSNNFTGSLSPS 408 (955)
Q Consensus 329 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~g~ip~~~~~~~~l~~l~l~~n~l~~~~p~~ 408 (955)
+...-...|..+++|+.+.+.++.++..-...|.++.+|+.+++ ..+ ++..-..+
T Consensus 274 i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l------------------------p~~-l~~I~~~a 328 (379)
T 4h09_A 274 VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL------------------------PTA-LKTIQVYA 328 (379)
T ss_dssp CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC------------------------CTT-CCEECTTT
T ss_pred ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc------------------------Ccc-ccEEHHHH
Confidence 22222233444455555555444444333344444444544444 322 22233446
Q ss_pred ccCCCCCcEEECcCCccccccchhccCCC
Q 002186 409 LSNCSSLVRLRLEDNSFSGEIPLKFSQLP 437 (955)
Q Consensus 409 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 437 (955)
|.+|++|+.+.+..+ ++..-..+|.+.+
T Consensus 329 F~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 329 FKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred hhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 777888888777654 4433344555543
No 414
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.40 E-value=3e-05 Score=86.44 Aligned_cols=315 Identities=10% Similarity=0.046 Sum_probs=159.6
Q ss_pred cccCCCCCCEEEccCCcCCccCCccccCCCCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCCCcccCCCCcCCCCCC
Q 002186 120 EIFNLTSLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSYFSGPIPSQFGSFKSL 199 (955)
Q Consensus 120 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~l~~~~p~~~~~l~~L 199 (955)
.+....+|+.+.+..+ ++.+-..+|.++.+|+.++|..+ ++..-..+|.++ +|+.+.+..+ ++..-...|.. .+|
T Consensus 41 ~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDL 115 (379)
T ss_dssp TGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCC
T ss_pred ccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCc
Confidence 4556678888888643 56566678999999999999754 665555677776 6777777644 44333445554 478
Q ss_pred cEEEccCCCCCCCCchhccCCCCCcEEecccccccCCCCccccCCCCCcEEeccCCCCCCCCCccccCCCCCCEEEeccc
Q 002186 200 EFLHLAGNLLNDQIPAELGMLKTVTHMEIGYNFYQGNIPWQLGNMSEVQYLDIAGANLSGSIPKELSNLTKLESLFLFRN 279 (955)
Q Consensus 200 ~~L~L~~N~l~~~~p~~l~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N 279 (955)
+.+.+..+- +..-...+.. .+++...+..+ +...-...+.+...++...+..+........... . +
T Consensus 116 ~~i~lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~---------~--~ 181 (379)
T 4h09_A 116 DDFEFPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL---------Y--N 181 (379)
T ss_dssp SEEECCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEE---------E--E
T ss_pred ccccCCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeeccccee---------c--c
Confidence 888887552 2222222322 23444443322 1111122334455555555443322110000000 0 0
Q ss_pred cccccCCccCcCCCccCEEEccCCCCCCCCCcccCCCCCCcEEecccccCCCCCccccCCCCCccEEEccCCcCcccCCc
Q 002186 280 QLAGQVPWEFSRVTTLKSLDLSDNRLSGPIPESFADLKNLRLLSLMYNEMSGTVPESLVQLPSLEILFIWNNYFSGSLPE 359 (955)
Q Consensus 280 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~ 359 (955)
. .......+.....+..+.+..+. .......+....+|+.+.+..+ +.......+..+..|+.+.+..+ ++..-..
T Consensus 182 ~-~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 182 K-NKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp T-TSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred c-ccceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 0 00000112222233333332211 1122233444444444444322 11122233444445555554433 3322333
Q ss_pred ccCCCCCCCeeecCCCcccccCCC-CCCCCCccceeeccCCCCCCCCCcCccCCCCCcEEECcCCccccccchhccCCCC
Q 002186 360 NLGRNSKLRWVDVSTNNFNGSIPP-DICSGGVLFKLILFSNNFTGSLSPSLSNCSSLVRLRLEDNSFSGEIPLKFSQLPD 438 (955)
Q Consensus 360 ~~~~~~~L~~L~ls~N~l~g~ip~-~~~~~~~l~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 438 (955)
.+..+.+|+.+.+..+ +. .++. .+..+.+|+.+.+.++.+...-...|.+|++|+.+.|.++ ++..-..+|.++.+
T Consensus 258 aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 334 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKA 334 (379)
T ss_dssp TTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred ccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCC
Confidence 4445555555555432 22 2222 2333455666666655555555667899999999999765 66455678999999
Q ss_pred CCEEECCCCcCCCCCCcchhhcc
Q 002186 439 INYIDLSRNGFTGGIPTDINQAS 461 (955)
Q Consensus 439 L~~L~Ls~N~l~~~ip~~~~~~~ 461 (955)
|+.+.+..+ ++..-...|.+++
T Consensus 335 L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 335 LSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCEEEECCc-cCEEchhHhhCCC
Confidence 999998655 4432234555543
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=5.5e-08 Score=101.49 Aligned_cols=96 Identities=21% Similarity=0.289 Sum_probs=71.8
Q ss_pred EECCCCcC---cccCCccccCCCCCCEEEccCCcCCc--cCCccccCCCCCcEEeCCCCCCCCCCchhhcCCC--cceEE
Q 002186 106 LNLSHNSF---SGQFPVEIFNLTSLISLDISRNNFSG--HFPGGIQSLRNLLVLDAFSNSFSGSVPAEISQLE--HLKVL 178 (955)
Q Consensus 106 L~Ls~n~l---~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~LdL~~N~l~~~~p~~~~~L~--~L~~L 178 (955)
++++.|.. .+.++....++++|++|+|++|+|++ .+|..+..+++|++|||++|.+++. ..+..+. +|++|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 66777743 23333333578899999999999988 5567778899999999999999865 3455555 89999
Q ss_pred EecCCCCcccCCC-------CcCCCCCCcEEE
Q 002186 179 NLAGSYFSGPIPS-------QFGSFKSLEFLH 203 (955)
Q Consensus 179 ~Ls~n~l~~~~p~-------~~~~l~~L~~L~ 203 (955)
+|++|.+.+.+|+ .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999887663 256677777765
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.32 E-value=1.1e-06 Score=95.75 Aligned_cols=134 Identities=14% Similarity=0.091 Sum_probs=98.8
Q ss_pred chhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCC---C-CceeEeEEEEcCCeeEEEEeecC
Q 002186 694 TECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRH---K-NLIRLLGFCYNRHQAYLLYDYLP 769 (955)
Q Consensus 694 ~~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H---~-niv~l~g~~~~~~~~~lv~ey~~ 769 (955)
...+.++.|....||+. |..+++|+-... .....+.+|.+.+..+.+ + .+.+++++ +..++||||++
T Consensus 40 ~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~ 110 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIK 110 (320)
T ss_dssp SCEEEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCC
T ss_pred EEEEeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecC
Confidence 35667889999999998 667888876432 223457888888887766 2 23344544 56789999999
Q ss_pred CCChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCC--------------------------------------------
Q 002186 770 NGNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCY-------------------------------------------- 805 (955)
Q Consensus 770 ~gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~-------------------------------------------- 805 (955)
|.++.+.....++..++..++.++++.++.||+...
T Consensus 111 G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
T 3r70_A 111 GERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIE 190 (320)
T ss_dssp CBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred CccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHH
Confidence 998875544455666777788888888888885322
Q ss_pred ----------------CCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 806 ----------------PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 806 ----------------~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+.++|+|++|.||+++.+..+.|.||+.+..
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 191 TIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2358999999999999866679999998754
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=2e-07 Score=92.59 Aligned_cols=91 Identities=15% Similarity=0.175 Sum_probs=45.5
Q ss_pred ccCCCCCCEEEccCC-cCCcc----CCccccCCCCCcEEeCCCCCCCCC----CchhhcCCCcceEEEecCCCCccc---
Q 002186 121 IFNLTSLISLDISRN-NFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VPAEISQLEHLKVLNLAGSYFSGP--- 188 (955)
Q Consensus 121 ~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~----~p~~~~~L~~L~~L~Ls~n~l~~~--- 188 (955)
+...++|++|+|++| .+... +...+...++|++|||++|.+... +...+...++|++|+|++|.+...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344555555555555 44321 223344445555555555555421 222334445566666666665432
Q ss_pred -CCCCcCCCCCCcEEEc--cCCCCCC
Q 002186 189 -IPSQFGSFKSLEFLHL--AGNLLND 211 (955)
Q Consensus 189 -~p~~~~~l~~L~~L~L--~~N~l~~ 211 (955)
+...+...++|++|+| ++|.+..
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCH
Confidence 2344555556666666 5566543
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.24 E-value=1.3e-07 Score=93.84 Aligned_cols=111 Identities=14% Similarity=0.078 Sum_probs=85.9
Q ss_pred CCCCcEEECCCC-cCccc----CCccccCCCCCCEEEccCCcCCcc----CCccccCCCCCcEEeCCCCCCCCC----Cc
Q 002186 100 FNELVDLNLSHN-SFSGQ----FPVEIFNLTSLISLDISRNNFSGH----FPGGIQSLRNLLVLDAFSNSFSGS----VP 166 (955)
Q Consensus 100 l~~L~~L~Ls~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdL~~N~l~~~----~p 166 (955)
.+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|||++|.++.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 467999999999 88642 445567789999999999998642 344566678999999999999753 35
Q ss_pred hhhcCCCcceEEEe--cCCCCccc----CCCCcCCCCCCcEEEccCCCCC
Q 002186 167 AEISQLEHLKVLNL--AGSYFSGP----IPSQFGSFKSLEFLHLAGNLLN 210 (955)
Q Consensus 167 ~~~~~L~~L~~L~L--s~n~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 210 (955)
..+...++|++|+| ++|.+... +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56777889999999 88998753 3344556688999999988763
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.18 E-value=2.6e-06 Score=90.83 Aligned_cols=134 Identities=16% Similarity=0.188 Sum_probs=91.5
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeeccc-chHHHHHHHHHHHhccCCC---CceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGA-TRIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.++.|.++.||++...+|+.++||+..... .....+..|++.|+.++|. .+.+++++. ..++||||+++
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 456789999999999999899999999965332 2245788999999999875 577888764 36899999999
Q ss_pred CChhH-----------HhhcC-----------------------CCHHHHH---HH-----------------HHHHHHH
Q 002186 771 GNLSE-----------KIRTK-----------------------RDWAAKY---KI-----------------VLGVARG 796 (955)
Q Consensus 771 gsL~~-----------~l~~~-----------------------~~~~~~~---~i-----------------~~~ia~g 796 (955)
+++.. .||.. .+|.+-. ++ ...+.+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87532 12210 1344321 10 0111122
Q ss_pred HHHHh----cCCCCCcccCCCCCCCeeeCCCCCceECccccc
Q 002186 797 LCFLH----HDCYPAIPHGDLKASNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 797 l~~lH----~~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~ 834 (955)
++.+. ....|.++|+|+.+.||+++.+ .+.|.|| .+
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~ 214 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AA 214 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CC
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-Cc
Confidence 23332 2335689999999999999874 5889999 54
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.15 E-value=8.2e-06 Score=87.99 Aligned_cols=137 Identities=13% Similarity=0.061 Sum_probs=94.2
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCC---CceeEeEEEE-cCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHK---NLIRLLGFCY-NRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~---niv~l~g~~~-~~~~~~lv~ey~~~ 770 (955)
..+.++.|....||+. |..++||+-. .......+.+|.+.|+.+.+. .+-+.++++. ..+..++||||++|
T Consensus 23 ~v~~l~~G~~n~v~~v----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 23 SVESLGEGFRNYAILV----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp CEEEEEECSSEEEEEE----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeeecCCCcceeEEEE----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 3445677888889987 5668888743 222355788999999988753 2456677775 45567899999999
Q ss_pred CChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 002186 771 GNLSEKIRTKRDWAAKYKIVLGVARGLCFLHHD----------------------------------------------- 803 (955)
Q Consensus 771 gsL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~----------------------------------------------- 803 (955)
..+.+.....++..++..++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~ 177 (306)
T 3tdw_A 98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQ 177 (306)
T ss_dssp EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHH
T ss_pred eECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHH
Confidence 888764333344444555555555555555542
Q ss_pred ----------CCCCcccCCCCCCCeeeCC---CCC-ceECccccccc
Q 002186 804 ----------CYPAIPHGDLKASNIVFDE---NME-PHLAEFGFKYL 836 (955)
Q Consensus 804 ----------~~~~iiHrdlk~~NiLl~~---~~~-~ki~DfGl~~~ 836 (955)
..+.++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 178 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 178 SYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235699999999999987 455 48999997654
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.96 E-value=2.9e-05 Score=82.10 Aligned_cols=134 Identities=19% Similarity=0.116 Sum_probs=91.6
Q ss_pred hccCCCCC-ceEEEeCC-CCcEEEEEEeecccchHHHHHHHHHHHhccC-CCCceeEeEEEEcCCeeEEEEeecCCCChh
Q 002186 698 EAARPQSA-AGCKAVLP-TGITVSVKKIEWGATRIKIVSEFITRIGTVR-HKNLIRLLGFCYNRHQAYLLYDYLPNGNLS 774 (955)
Q Consensus 698 ~~g~g~~g-~vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-H~niv~l~g~~~~~~~~~lv~ey~~~gsL~ 774 (955)
.+..|..+ .||+.... +|..+.||+-..+ ....+.+|.+.|+.+. +--+-++++++.+.+..++||||+++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 34556666 58988764 4667888986533 3456777888887664 222457888999889999999999988876
Q ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------------
Q 002186 775 EKIRTKRDWAAKYKIVLGVARGLCFLHHD--------------------------------------------------- 803 (955)
Q Consensus 775 ~~l~~~~~~~~~~~i~~~ia~gl~~lH~~--------------------------------------------------- 803 (955)
+..... ...+..++.++++.++-||..
T Consensus 109 ~~~~~~--~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 109 QVLEEY--PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHHHHC--GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred ccccCC--HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 654321 122234455555555555531
Q ss_pred ----CCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 804 ----CYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 804 ----~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
..+.++|+|+.+.||+++.+..+-|.||+.+.
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 01237899999999999987767799999764
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.80 E-value=3.3e-05 Score=85.29 Aligned_cols=74 Identities=5% Similarity=-0.086 Sum_probs=53.9
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCC--ceeEeEEEEcC-CeeEEEEeecCCCC
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGFCYNR-HQAYLLYDYLPNGN 772 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~~~~~-~~~~lv~ey~~~gs 772 (955)
.+.++.|....+|+... +|..+++|.-... ..+..|...+..+.... +-++++++... +..|+||||+++..
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 45577888999999875 5788889986532 24777888887776433 44677777764 67899999999765
Q ss_pred hh
Q 002186 773 LS 774 (955)
Q Consensus 773 L~ 774 (955)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.71 E-value=2.3e-05 Score=86.60 Aligned_cols=80 Identities=9% Similarity=-0.023 Sum_probs=54.1
Q ss_pred hhhc-cCCCCCceEEEeCC-------CCcEEEEEEeeccc---c-hHHHHHHHHHHHhccCC---CCceeEeEEEEcC--
Q 002186 696 CEEA-ARPQSAAGCKAVLP-------TGITVSVKKIEWGA---T-RIKIVSEFITRIGTVRH---KNLIRLLGFCYNR-- 758 (955)
Q Consensus 696 ~~~~-g~g~~g~vy~~~~~-------~g~~vAvK~~~~~~---~-~~~~~~~e~~~l~~l~H---~niv~l~g~~~~~-- 758 (955)
.+.+ +.|....+|+.... +|..+++|+-.... . ....+.+|++.++.++. -.+.++++++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3456 77888899988764 26778888765432 1 12346677777776643 2456788887665
Q ss_pred -CeeEEEEeecCCCChhH
Q 002186 759 -HQAYLLYDYLPNGNLSE 775 (955)
Q Consensus 759 -~~~~lv~ey~~~gsL~~ 775 (955)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 35789999999876643
No 424
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.48 E-value=0.00038 Score=74.59 Aligned_cols=134 Identities=16% Similarity=0.153 Sum_probs=90.3
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC---CCCceeEeEEEEcCCeeEEEEeecCCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR---HKNLIRLLGFCYNRHQAYLLYDYLPNG 771 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~---H~niv~l~g~~~~~~~~~lv~ey~~~g 771 (955)
..+.++.|....+|+... ++..++||.-... ....+..|.+.|+.+. ...+.+.++++...+..++||||+++.
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 455678999999999987 4667888886532 3556778888877764 356778899988888899999999987
Q ss_pred ChhH-----------Hhhc--C----------------------CCHHHHH---HHH--HH--------------HHHHH
Q 002186 772 NLSE-----------KIRT--K----------------------RDWAAKY---KIV--LG--------------VARGL 797 (955)
Q Consensus 772 sL~~-----------~l~~--~----------------------~~~~~~~---~i~--~~--------------ia~gl 797 (955)
.+.. .||. . .+|.+-. ++. .+ +.+.+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6521 1221 0 1465321 111 11 11111
Q ss_pred -HHHhc-CCCCCcccCCCCCCCeeeCCCCCceECccc
Q 002186 798 -CFLHH-DCYPAIPHGDLKASNIVFDENMEPHLAEFG 832 (955)
Q Consensus 798 -~~lH~-~~~~~iiHrdlk~~NiLl~~~~~~ki~DfG 832 (955)
+.|.. ...|.++|+|+.+.|++++.++ +.|.|+.
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23432 2356899999999999999887 8899974
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.45 E-value=0.00035 Score=76.40 Aligned_cols=135 Identities=17% Similarity=0.193 Sum_probs=78.0
Q ss_pred hhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhcc-----CCCCceeEe-E--EEEcCCeeEEEEeec
Q 002186 697 EEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTV-----RHKNLIRLL-G--FCYNRHQAYLLYDYL 768 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l-----~H~niv~l~-g--~~~~~~~~~lv~ey~ 768 (955)
+.++.|..+.||+....+|. +++|+..... .....|++++..+ ..|.++... | +....+..++||||+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSGA-VCLKRIHRPE---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp EECC----CEEEEEEETTEE-EEEEEECSCH---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eeccccccCcEEEEEeCCCC-EEEEecCCCH---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 34555678899999876664 8899886422 2233344444333 335554411 1 123456789999999
Q ss_pred CCCChh--------------HHhhc---C-------------CCHHHHH-------------------------------
Q 002186 769 PNGNLS--------------EKIRT---K-------------RDWAAKY------------------------------- 787 (955)
Q Consensus 769 ~~gsL~--------------~~l~~---~-------------~~~~~~~------------------------------- 787 (955)
+|..+. ..+|. . ..|....
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 11121 0 1343211
Q ss_pred HHHHHHHHHHHHHhc----------CCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 788 KIVLGVARGLCFLHH----------DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 788 ~i~~~ia~gl~~lH~----------~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
.+...+.+++++++. ...+.++|+|+++.||+++.+..+.|.||+.+.
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123445666763 124589999999999999888889999999763
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=3.7e-05 Score=74.17 Aligned_cols=83 Identities=11% Similarity=0.130 Sum_probs=42.0
Q ss_pred CCCEEEccCCcCCccCCccccCCCCCcEEeCCCCC-CCCCCchhhcCC----CcceEEEecCCC-CcccCCCCcCCCCCC
Q 002186 126 SLISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS-FSGSVPAEISQL----EHLKVLNLAGSY-FSGPIPSQFGSFKSL 199 (955)
Q Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~-l~~~~p~~~~~L----~~L~~L~Ls~n~-l~~~~p~~~~~l~~L 199 (955)
+|++|||+++.++..--..+..+++|++|+|++|. ++..--..+..+ ++|++|+|++|. ++..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45555555555443222334455555566655553 332222234443 256777777653 443222235566677
Q ss_pred cEEEccCCC
Q 002186 200 EFLHLAGNL 208 (955)
Q Consensus 200 ~~L~L~~N~ 208 (955)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776663
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.39 E-value=0.0002 Score=80.23 Aligned_cols=74 Identities=12% Similarity=0.003 Sum_probs=47.9
Q ss_pred hhhccCCCCCceEEEeCC-CCcEEEEEEeeccc--------chHHHHHHHHHHHhccCC--CCce-eEeEEEEcCCeeEE
Q 002186 696 CEEAARPQSAAGCKAVLP-TGITVSVKKIEWGA--------TRIKIVSEFITRIGTVRH--KNLI-RLLGFCYNRHQAYL 763 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~-~g~~vAvK~~~~~~--------~~~~~~~~e~~~l~~l~H--~niv-~l~g~~~~~~~~~l 763 (955)
.+.+|.|..+.||++... +|+.|+||...... ...+.+..|.+.++.+.+ |..| +++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 456899999999999864 57889999864321 112345667777776632 4444 45544 3455689
Q ss_pred EEeecCCC
Q 002186 764 LYDYLPNG 771 (955)
Q Consensus 764 v~ey~~~g 771 (955)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999864
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.19 E-value=8.4e-05 Score=71.71 Aligned_cols=83 Identities=10% Similarity=0.075 Sum_probs=48.9
Q ss_pred CCCcEEeCCCCCCCCCCchhhcCCCcceEEEecCCC-CcccCCCCcCCC----CCCcEEEccCCC-CCCCCchhccCCCC
Q 002186 149 RNLLVLDAFSNSFSGSVPAEISQLEHLKVLNLAGSY-FSGPIPSQFGSF----KSLEFLHLAGNL-LNDQIPAELGMLKT 222 (955)
Q Consensus 149 ~~L~~LdL~~N~l~~~~p~~~~~L~~L~~L~Ls~n~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~l~~l~~ 222 (955)
.+|+.|||+++.++..--..+..+++|++|+|++|. ++..--..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888887765544556777888888888774 443222234443 357777777764 55433333444445
Q ss_pred CcEEecccc
Q 002186 223 VTHMEIGYN 231 (955)
Q Consensus 223 L~~L~l~~n 231 (955)
|++|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555544443
No 429
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.02 E-value=0.0013 Score=74.10 Aligned_cols=73 Identities=14% Similarity=0.054 Sum_probs=44.6
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeec-------c-cc--hHHHHHHHHHHHh-ccCCCCceeEeEEEEcCCeeEE
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEW-------G-AT--RIKIVSEFITRIG-TVRHKNLIRLLGFCYNRHQAYL 763 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~-------~-~~--~~~~~~~e~~~l~-~l~H~niv~l~g~~~~~~~~~l 763 (955)
..+.+|.|..+.||++.. +++.++||.... . .. ....++.|+..+. ...+..+.+++++. ++..++
T Consensus 38 ~i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~l 114 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALI 114 (420)
T ss_dssp EEEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEE
T ss_pred EEEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEE
Confidence 345678899999999975 567899994321 1 10 2223333333322 22234566677665 566799
Q ss_pred EEeec-CC
Q 002186 764 LYDYL-PN 770 (955)
Q Consensus 764 v~ey~-~~ 770 (955)
||||+ ++
T Consensus 115 v~e~l~~g 122 (420)
T 2pyw_A 115 GMRYLEPP 122 (420)
T ss_dssp EECCCCTT
T ss_pred EEeecCCc
Confidence 99999 76
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.83 E-value=0.0013 Score=69.99 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=53.0
Q ss_pred hhhhccCCCCCceEEEeCCCCcEEEEEEeecccc-hHHHHHHHHHHHhccCCC---CceeEeEEEEcCCeeEEEEeecCC
Q 002186 695 ECEEAARPQSAAGCKAVLPTGITVSVKKIEWGAT-RIKIVSEFITRIGTVRHK---NLIRLLGFCYNRHQAYLLYDYLPN 770 (955)
Q Consensus 695 ~~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~-~~~~~~~e~~~l~~l~H~---niv~l~g~~~~~~~~~lv~ey~~~ 770 (955)
..+.+|.|..+.||+.++.||+.|.||+-..... ....+..|.+.|+.+.-. -+.+.+++. ..++||||++.
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~ 94 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecc
Confidence 5566889999999999999999999998653322 234577888887766321 234455442 34799999987
Q ss_pred CCh
Q 002186 771 GNL 773 (955)
Q Consensus 771 gsL 773 (955)
+..
T Consensus 95 ~~~ 97 (288)
T 3f7w_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred cCC
Confidence 654
No 431
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.66 E-value=0.0019 Score=69.98 Aligned_cols=135 Identities=10% Similarity=0.033 Sum_probs=78.4
Q ss_pred hccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCC--ceeEeEE-----EEcCCeeEEEEeecCC
Q 002186 698 EAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKN--LIRLLGF-----CYNRHQAYLLYDYLPN 770 (955)
Q Consensus 698 ~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~n--iv~l~g~-----~~~~~~~~lv~ey~~~ 770 (955)
.++ |....||+....+|+.+++|...........+..|.+.+..++... +.+++.. ....+..++||||++|
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecCC
Confidence 355 7778999998888888999998643333455666777766553222 3334332 1224567899999987
Q ss_pred CChhH--------------Hhhc-----------CCCHHHH----HHH---------------HHHHHHHHHHHhc----
Q 002186 771 GNLSE--------------KIRT-----------KRDWAAK----YKI---------------VLGVARGLCFLHH---- 802 (955)
Q Consensus 771 gsL~~--------------~l~~-----------~~~~~~~----~~i---------------~~~ia~gl~~lH~---- 802 (955)
..+.. .+|. ..++..- ..+ ...+.+.++.+..
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 54321 0111 0112110 001 0011122233322
Q ss_pred CCCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 803 DCYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 803 ~~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
...+.++|+|+++.||+++ + .+.|.||+.+.
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1234688999999999999 4 89999998764
No 432
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.55 E-value=0.0088 Score=64.88 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=26.8
Q ss_pred CCCcccCCCCCCCeeeCCC----CCceECccccccc
Q 002186 805 YPAIPHGDLKASNIVFDEN----MEPHLAEFGFKYL 836 (955)
Q Consensus 805 ~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~~ 836 (955)
.+.++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3479999999999999874 6789999997653
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.45 E-value=0.003 Score=57.98 Aligned_cols=60 Identities=18% Similarity=0.202 Sum_probs=43.7
Q ss_pred eeeecccccc-ccchhhhcCCCCCcEEECCCCCCccccCCCcCCCCCCcEEECCCCcceeccC
Q 002186 537 RIDLANNKLI-GSIPEVLARLPVLGVLDLSHNSLSGQIPAKFGSCSSLTVLNVSFNDISGSIP 598 (955)
Q Consensus 537 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~ip 598 (955)
.+|.+++.++ ..+|..+. ++|+.|||++|+|+...+..|..+++|++|+|++|++....-
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 5667777765 34553321 358888899998888888888888899999988888765433
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.42 E-value=0.0012 Score=64.95 Aligned_cols=84 Identities=13% Similarity=0.123 Sum_probs=39.9
Q ss_pred CCCCCEEEccCC-cCCc----cCCccccCCCCCcEEeCCCCCCCC----CCchhhcCCCcceEEEecCCCCccc----CC
Q 002186 124 LTSLISLDISRN-NFSG----HFPGGIQSLRNLLVLDAFSNSFSG----SVPAEISQLEHLKVLNLAGSYFSGP----IP 190 (955)
Q Consensus 124 l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~LdL~~N~l~~----~~p~~~~~L~~L~~L~Ls~n~l~~~----~p 190 (955)
-+.|++|+|++| .|.. .+-..+..-+.|+.|+|++|.+.. .+-..+..-+.|++|+|++|.+... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 344555555543 3321 122234444555555555555542 1222333445566666666665431 22
Q ss_pred CCcCCCCCCcEEEccCC
Q 002186 191 SQFGSFKSLEFLHLAGN 207 (955)
Q Consensus 191 ~~~~~l~~L~~L~L~~N 207 (955)
+.+..-+.|++|+|++|
T Consensus 120 ~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHTTTTCCCSEEECCCC
T ss_pred HHHhhCCceeEEECCCC
Confidence 33444455677777654
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.37 E-value=0.00076 Score=66.31 Aligned_cols=108 Identities=12% Similarity=0.085 Sum_probs=75.3
Q ss_pred CCCcEEECCCC-cCcc----cCCccccCCCCCCEEEccCCcCCc----cCCccccCCCCCcEEeCCCCCCCCC----Cch
Q 002186 101 NELVDLNLSHN-SFSG----QFPVEIFNLTSLISLDISRNNFSG----HFPGGIQSLRNLLVLDAFSNSFSGS----VPA 167 (955)
Q Consensus 101 ~~L~~L~Ls~n-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdL~~N~l~~~----~p~ 167 (955)
+.|+.|+|++| .|.. .+-..+..-+.|++|+|++|.|.. .+...+..-+.|++|+|++|.|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 57999999985 7753 234456677899999999999873 2334555678999999999999742 223
Q ss_pred hhcCCCcceEEEecCCC---Ccc----cCCCCcCCCCCCcEEEccCCC
Q 002186 168 EISQLEHLKVLNLAGSY---FSG----PIPSQFGSFKSLEFLHLAGNL 208 (955)
Q Consensus 168 ~~~~L~~L~~L~Ls~n~---l~~----~~p~~~~~l~~L~~L~L~~N~ 208 (955)
.+..-+.|++|+|++|. +.. .+...+..-+.|+.|+++.|.
T Consensus 121 aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 45555779999998653 322 123344556678888887664
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.36 E-value=0.0054 Score=56.18 Aligned_cols=34 Identities=24% Similarity=0.256 Sum_probs=15.1
Q ss_pred CCEEEccCCcCCccCCccccCCCCCcEEeCCCCC
Q 002186 127 LISLDISRNNFSGHFPGGIQSLRNLLVLDAFSNS 160 (955)
Q Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL~~N~ 160 (955)
|++|+|++|+|+...++.|..+++|++|+|++|.
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP 66 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANP 66 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCC
Confidence 4444444444443333344444444444444443
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.29 E-value=0.0029 Score=68.36 Aligned_cols=138 Identities=13% Similarity=0.115 Sum_probs=76.5
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccC-----CCCceeEe-E--EEEcCCeeEEEEee
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVR-----HKNLIRLL-G--FCYNRHQAYLLYDY 767 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~-----H~niv~l~-g--~~~~~~~~~lv~ey 767 (955)
.+.++.|....+|+....+| .+++|..... ...+.+..|++.+..++ -|.++... | +....+..++||||
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 34466787788999987766 5778887642 12233445666665543 23333210 1 11224567899999
Q ss_pred cCCCChhH--------------Hhhc-------C----C---CHHHHHH------------HHHHHHHHHHHHhcC----
Q 002186 768 LPNGNLSE--------------KIRT-------K----R---DWAAKYK------------IVLGVARGLCFLHHD---- 803 (955)
Q Consensus 768 ~~~gsL~~--------------~l~~-------~----~---~~~~~~~------------i~~~ia~gl~~lH~~---- 803 (955)
++|..+.. .+|. . . .|..... +...+.+.+++++..
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 99765421 1121 0 0 1433111 011234455555532
Q ss_pred CCCCcccCCCCCCCeeeCCCCCceECcccccc
Q 002186 804 CYPAIPHGDLKASNIVFDENMEPHLAEFGFKY 835 (955)
Q Consensus 804 ~~~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~ 835 (955)
..+.++|+|+.+.||+++.+..+.|.||+.+.
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23468999999999999887656899999763
No 438
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.88 E-value=0.0036 Score=66.88 Aligned_cols=71 Identities=7% Similarity=-0.004 Sum_probs=40.7
Q ss_pred hhhccCCCCCceEEEeCCCCcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEeec-CCCCh
Q 002186 696 CEEAARPQSAAGCKAVLPTGITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYL-PNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~-~~gsL 773 (955)
.+.++.|....+|+. ..+.+|+-..+....-...+|.+.++.+....+. +++++ +++.-++|+||+ ++-++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 456778888999998 4577787654321111224566666555433333 45544 343457899999 55444
No 439
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.71 E-value=0.0078 Score=67.72 Aligned_cols=73 Identities=14% Similarity=0.021 Sum_probs=47.3
Q ss_pred hhhccCCCCCceEEEeCCC--------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCc-eeEeEEEEcCCeeEEEEe
Q 002186 696 CEEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~e 766 (955)
.+.++.|....+|+...++ +..+.+|+-... ...+.+.+|.++++.+...++ .++++.+. + .+|||
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e 152 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEE 152 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEEC
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEE
Confidence 3456778888999998753 578888887431 111344467888777654444 45676653 2 38999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|+++-.+
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986343
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.70 E-value=0.021 Score=62.73 Aligned_cols=135 Identities=13% Similarity=0.132 Sum_probs=77.0
Q ss_pred hhccCCCCCceEEEeCCC--------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCc-eeEeEEEEcCCeeEEEEee
Q 002186 697 EEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNL-IRLLGFCYNRHQAYLLYDY 767 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~ni-v~l~g~~~~~~~~~lv~ey 767 (955)
+.+..|....+|+...++ ++.+.+|+-.........+.+|.++++.+.-..+ -++++++.+ .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEE
Confidence 345667778899988753 5788888853322234455678888776643333 356666543 299999
Q ss_pred cCCCChhHH-----------------hhc-------CCC--HHHHHHHHHHHH-------------------HHHHHHh-
Q 002186 768 LPNGNLSEK-----------------IRT-------KRD--WAAKYKIVLGVA-------------------RGLCFLH- 801 (955)
Q Consensus 768 ~~~gsL~~~-----------------l~~-------~~~--~~~~~~i~~~ia-------------------~gl~~lH- 801 (955)
++|..+..- ||. ... |.+..++..++. +.++.|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 997554310 111 012 233333333221 1223332
Q ss_pred ---cC-CCCCcccCCCCCCCeeeCCC----CCceECcccccc
Q 002186 802 ---HD-CYPAIPHGDLKASNIVFDEN----MEPHLAEFGFKY 835 (955)
Q Consensus 802 ---~~-~~~~iiHrdlk~~NiLl~~~----~~~ki~DfGl~~ 835 (955)
.. ....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 22 22368899999999999876 688999999764
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.50 E-value=0.014 Score=64.27 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=42.0
Q ss_pred hhccCCCCCceEEEeCCC---------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEe
Q 002186 697 EEAARPQSAAGCKAVLPT---------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 697 ~~~g~g~~g~vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~e 766 (955)
..++.|....+|+....+ +..+.+|+-............|.+.++.+....++ ++++.. + -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 456677788899988654 26788887654322211235667777666433443 566544 2 368999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.24 E-value=0.021 Score=64.55 Aligned_cols=74 Identities=8% Similarity=-0.073 Sum_probs=46.1
Q ss_pred hhhccCCCCCceEEEeCCC-CcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEeecCCCCh
Q 002186 696 CEEAARPQSAAGCKAVLPT-GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYDYLPNGNL 773 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~ey~~~gsL 773 (955)
.+.++.|-...+|+...++ +..+.+|+-.......-....|.++++.+...+++ ++++++. + .+||||+++-.+
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 4557778888999998765 57788887643221111125677777777655554 6777662 2 259999987444
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.69 E-value=0.11 Score=56.28 Aligned_cols=31 Identities=16% Similarity=0.279 Sum_probs=27.0
Q ss_pred CCcccCCCCCCCeeeCCCCCceECccccccc
Q 002186 806 PAIPHGDLKASNIVFDENMEPHLAEFGFKYL 836 (955)
Q Consensus 806 ~~iiHrdlk~~NiLl~~~~~~ki~DfGl~~~ 836 (955)
+.++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999987643
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=90.91 E-value=0.26 Score=54.84 Aligned_cols=74 Identities=3% Similarity=-0.067 Sum_probs=44.6
Q ss_pred hhhccCCCCCceEEEeCCC--------CcEEEEEEeecccchHHHHHHHHHHHhccCCCCce-eEeEEEEcCCeeEEEEe
Q 002186 696 CEEAARPQSAAGCKAVLPT--------GITVSVKKIEWGATRIKIVSEFITRIGTVRHKNLI-RLLGFCYNRHQAYLLYD 766 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~e~~~l~~l~H~niv-~l~g~~~~~~~~~lv~e 766 (955)
.+.+..|....+|+...++ +..+.+|+-..+....-...+|.++++.+.-..++ ++++.+ . -++|||
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 3445667778899988753 57888888643322111234566666665433343 455543 2 278999
Q ss_pred ecCCCCh
Q 002186 767 YLPNGNL 773 (955)
Q Consensus 767 y~~~gsL 773 (955)
|++|..+
T Consensus 151 fI~G~~l 157 (424)
T 3mes_A 151 FIDGEPL 157 (424)
T ss_dssp CCCSEEC
T ss_pred EeCCccC
Confidence 9998553
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.38 E-value=0.37 Score=52.99 Aligned_cols=29 Identities=24% Similarity=0.382 Sum_probs=25.4
Q ss_pred CcccCCCCCCCeeeCCC------CCceECcccccc
Q 002186 807 AIPHGDLKASNIVFDEN------MEPHLAEFGFKY 835 (955)
Q Consensus 807 ~iiHrdlk~~NiLl~~~------~~~ki~DfGl~~ 835 (955)
.++|+|+.+.||+++.+ ..+.+.||..+.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 68899999999999876 789999998764
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=83.58 E-value=8.8 Score=37.82 Aligned_cols=99 Identities=15% Similarity=0.066 Sum_probs=59.2
Q ss_pred CChhHHhhc---CCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCC-CCCCeeeCCCCCceECcccccccccccCCCCcc
Q 002186 771 GNLSEKIRT---KRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDL-KASNIVFDENMEPHLAEFGFKYLTQLADGSFPA 846 (955)
Q Consensus 771 gsL~~~l~~---~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdl-k~~NiLl~~~~~~ki~DfGl~~~~~~~~~~~~~ 846 (955)
-||.+.|.. .+...+.+.++.|.+++|.-.-....+ |..| -|..|++..+|.+...+ +.+. ..
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~---~~~i~~~~~i~l~~dG~V~f~~-~~s~---~~------ 99 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQP---RHRVRSAAQIRVWRDGAVTLAP-AADD---AG------ 99 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccC---CceecCCcceEEecCCceeccc-cccc---cc------
Confidence 368888864 678889999999999988665211111 2222 36888999998887764 2110 00
Q ss_pred cccccCchhhhhccCCcccccchhHHHHHHHHHhCCCC
Q 002186 847 KIAWTESGEFYNAMKEEMYMDVYGFGEIILEILTNGRL 884 (955)
Q Consensus 847 ~~~~~~~~e~~~~~~~~~~~DV~S~Gvvl~Elltg~~p 884 (955)
..+ ..+|+... ...+.+.=|||+|+++|.-+--+.|
T Consensus 100 ~~~-~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 100 EPP-PVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp --------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccC-CCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 011 22333321 2345677899999999998764433
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=75.74 E-value=5.3 Score=39.28 Aligned_cols=89 Identities=13% Similarity=0.091 Sum_probs=66.4
Q ss_pred HHHHhccCCCCceeEeEEEEcCCeeEEEEeecCCC-ChhHHhhcCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCC
Q 002186 737 ITRIGTVRHKNLIRLLGFCYNRHQAYLLYDYLPNG-NLSEKIRTKRDWAAKYKIVLGVARGLCFLHHDCYPAIPHGDLKA 815 (955)
Q Consensus 737 ~~~l~~l~H~niv~l~g~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~~~~~~i~~~ia~gl~~lH~~~~~~iiHrdlk~ 815 (955)
+.+|. -.||+.++. .+-.+++.+.+.|+.-+.+ +... ++ ..+...|++++..++....+++.. +|--+.|
T Consensus 37 l~LL~-~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-~~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P 107 (215)
T 4ann_A 37 MYLLE-QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-SFTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAP 107 (215)
T ss_dssp GGGGG-SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-GSCHHHHHHHHHHGGGGGGGGGSS-----EECCCSG
T ss_pred HHHHh-ccCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-hcCHHHHHHHHHHHHHHHHHhcCc-----eEEEEec
Confidence 44443 368999876 5667777777777655433 2322 33 467889999999999888777755 7888899
Q ss_pred CCeeeCCCCCceECccccc
Q 002186 816 SNIVFDENMEPHLAEFGFK 834 (955)
Q Consensus 816 ~NiLl~~~~~~ki~DfGl~ 834 (955)
+|+++|.++.+++.=.|+.
T Consensus 108 ~NL~f~~~~~p~i~~RGik 126 (215)
T 4ann_A 108 DELFFTRDGLPIAKTRGLQ 126 (215)
T ss_dssp GGEEECTTSCEEESCCEET
T ss_pred ceEEEcCCCCEEEEEccCc
Confidence 9999999999999988874
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=72.60 E-value=8.7 Score=37.86 Aligned_cols=84 Identities=10% Similarity=0.071 Sum_probs=63.2
Q ss_pred CCCCceeEeEEEEcCCeeEEEEeecCCCChhHHhhcCCCHHHHHHHHHHHHHHHH-HHhcCCCCCcccCCCCCCCeeeCC
Q 002186 744 RHKNLIRLLGFCYNRHQAYLLYDYLPNGNLSEKIRTKRDWAAKYKIVLGVARGLC-FLHHDCYPAIPHGDLKASNIVFDE 822 (955)
Q Consensus 744 ~H~niv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~~~~~~i~~~ia~gl~-~lH~~~~~~iiHrdlk~~NiLl~~ 822 (955)
.||.. -...-.+++.+.+.|+--+++-=...+ +..+...|++++..++.-.. +++.. +|--+.|+|+++|.
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i-~~~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~NL~f~~ 119 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI-RKTTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPENLMFNR 119 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH-HTSCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGGGEEECT
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH-HhcCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCceEEEeC
Confidence 58887 344556778888878765444333334 35688899999999988877 66654 77788899999999
Q ss_pred CCCceECcccccc
Q 002186 823 NMEPHLAEFGFKY 835 (955)
Q Consensus 823 ~~~~ki~DfGl~~ 835 (955)
++.+++.=.|+..
T Consensus 120 ~~~p~i~hRGi~~ 132 (219)
T 4ano_A 120 ALEPFFLHVGVKE 132 (219)
T ss_dssp TCCEEESCCEETT
T ss_pred CCcEEEEEcCCcc
Confidence 9999999888743
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=70.14 E-value=0.64 Score=52.42 Aligned_cols=59 Identities=8% Similarity=-0.021 Sum_probs=17.7
Q ss_pred hhhccCCCCCceEEEeCCC-CcEEEE------EEeecccc---hHHHHHHHHHHHhccCCCCceeEeEEEEc
Q 002186 696 CEEAARPQSAAGCKAVLPT-GITVSV------KKIEWGAT---RIKIVSEFITRIGTVRHKNLIRLLGFCYN 757 (955)
Q Consensus 696 ~~~~g~g~~g~vy~~~~~~-g~~vAv------K~~~~~~~---~~~~~~~e~~~l~~l~H~niv~l~g~~~~ 757 (955)
.+.+| ||.||+|.+.. ..+||| |..+.+.. ....+.+|..++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 34455 99999999753 367899 77654322 23456777888888999999999988753
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=68.64 E-value=7.7 Score=42.59 Aligned_cols=29 Identities=24% Similarity=0.437 Sum_probs=24.0
Q ss_pred cccCCCCCCCeee------CCCCCceECccccccc
Q 002186 808 IPHGDLKASNIVF------DENMEPHLAEFGFKYL 836 (955)
Q Consensus 808 iiHrdlk~~NiLl------~~~~~~ki~DfGl~~~ 836 (955)
++|.|+.+.||++ +++..+++.||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4556789999988753
No 451
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=26.44 E-value=3.2e+02 Score=28.61 Aligned_cols=75 Identities=12% Similarity=-0.001 Sum_probs=43.3
Q ss_pred eeEEEEeecCCCChhHHhhcCCCHHHH--HHHHHH--HHHHHHHHhcCCCC-C-cccCCCCCCCeeeCCCCC-ceECccc
Q 002186 760 QAYLLYDYLPNGNLSEKIRTKRDWAAK--YKIVLG--VARGLCFLHHDCYP-A-IPHGDLKASNIVFDENME-PHLAEFG 832 (955)
Q Consensus 760 ~~~lv~ey~~~gsL~~~l~~~~~~~~~--~~i~~~--ia~gl~~lH~~~~~-~-iiHrdlk~~NiLl~~~~~-~ki~DfG 832 (955)
..+++|||.+|..|.+.=+. .|... .+...+ -.-+++++.++.++ + +.+..-.+.|||++.+.. +.+.|-+
T Consensus 156 ~~~l~meyv~G~~L~e~~~~--~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn 233 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTT--SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSK 233 (342)
T ss_dssp SEEEEEECCCEEESTTCCSS--SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCC
T ss_pred cceehhhhcCCCccccchhh--hhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCC
Confidence 46799999996555442211 13222 122222 23456666655432 3 332346789999986544 8889999
Q ss_pred cccc
Q 002186 833 FKYL 836 (955)
Q Consensus 833 l~~~ 836 (955)
.+..
T Consensus 234 ~af~ 237 (342)
T 1cja_A 234 IIPL 237 (342)
T ss_dssp CCCC
T ss_pred cccc
Confidence 8754
Done!